BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041971
(1044 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359473527|ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
Length = 2788
Score = 1210 bits (3131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/1060 (58%), Positives = 772/1060 (72%), Gaps = 35/1060 (3%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E C + +G + + F SLSS LN+SQ QAVL+CLR+++ +HK +++LIWGPPGT
Sbjct: 224 VKENYYQCPVWIDGGYAKKFALSLSSNLNESQNQAVLACLRKIQYNHKPSVELIWGPPGT 283
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKTKTV +LL LL+M RTL C PTN+AI E+ +RV+KL +E E D +++F LGD
Sbjct: 284 GKTKTVGVLLYTLLRMNIRTLACAPTNIAITEVVSRVLKLREEPFENDLGANSMFCSLGD 343
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
ILL GN RLK S + E+YLDYRV RL +C P+TGW H F SM+DFL++CVS Y ++
Sbjct: 344 ILLFGNKSRLKAHSDIVEVYLDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFL 403
Query: 180 DNESMKQSEDIN-GDIIKEK------------ECGKEADVSDVEIKPFLEFVRDRFKCIA 226
+NES K+ N G KE+ E K+ D+S F+EF RDRF+ A
Sbjct: 404 ENESRKEKSCSNKGGSTKEEVFMKNELSSNECESTKKVDIS------FIEFARDRFRATA 457
Query: 227 APLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVD 286
PLR C+ FCT +PK +I K NF M LI LLDSFE+LL +D++V EELE L SH
Sbjct: 458 GPLRRCVRIFCTHLPKSFILKQNFQNMVYLIQLLDSFESLLSKDDVVPEELERLFSHQ-- 515
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
E + S LL+ R EC VL+ L+SS NELNLPSA+ K L+ K FC K ASL
Sbjct: 516 EAVRDSYSDSSDLLYVHRGECLSVLKTLRSSLNELNLPSAMNKGLI----KQFCFKMASL 571
Query: 347 FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMV 406
TASSSY L+ V M+PL+ LVIDEAAQLKE ES IPLQL I+HA+L GDECQLPAMV
Sbjct: 572 IFCTASSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQLPAMV 631
Query: 407 ESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR 466
SKVS EA FGRSLFERLS LG+ KHLL++QYRMHPSIS FPNS FY N+I D+ V+ +
Sbjct: 632 SSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSK 691
Query: 467 SYEKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
SY K +L GPM+G YSFINV G E + + S +NM+EV++V+KI+ NLYK W S +KL
Sbjct: 692 SYTKHYLSGPMFGSYSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSNQKL 751
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
SIG++SPY+AQVVA+Q+ LG KY N FAVKV ++DGFQ GEED+II+STVR+N+ GSI
Sbjct: 752 SIGVISPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSI 811
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGK 645
GFLSN +R NVALTRARHCLWILGN RTL + +SVWE LV DA R+ FFNAD+DKD+ K
Sbjct: 812 GFLSNPQRTNVALTRARHCLWILGNERTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAK 871
Query: 646 AILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLS 705
AIL +K E D+LD LL+ S LF++ RWKV FS NF KSF KL SD TKKSV+ LLL LS
Sbjct: 872 AILEIKTEFDQLDRLLDGSSILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNLS 931
Query: 706 NGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPK 765
+GWRPK+ N+D VCGSS I+KQFKVEGFYI+C+IDIVK + QVL+VWDILPLED+ K
Sbjct: 932 SGWRPKRLNIDRVCGSSSQILKQFKVEGFYIVCSIDIVKNT---QVLRVWDILPLEDILK 988
Query: 766 VVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSG 825
+V LDNI+ +YT +FIN CKEK ++ NLEVP+TW +S++V+FKN + S + S
Sbjct: 989 LVKHLDNIFQRYTDDFINRCKEKCLDRNLEVPRTWATSSDIVQFKNFCKEE--SQGNESA 1046
Query: 826 AAFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSP 885
AFD R+Y ENS VSESL LMKFY LS+ +V HLLSD GRELDLPFEVTD++ ++IL
Sbjct: 1047 DAFDGRSYVENSKVSESLLLMKFYSLSTGMVRHLLSDHDGRELDLPFEVTDQEQDIILYY 1106
Query: 886 RSTFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETE 945
RSTFILGRSGTGKTTVLT KLFQKE+ H MAME F + + + + +E +G+ +
Sbjct: 1107 RSTFILGRSGTGKTTVLTMKLFQKEQQHHMAMEGFQEDKGNASTNATYRNEVGTSVGKIQ 1166
Query: 946 RPILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLIDID--DEAE-FKDIPNSF 1002
+LRQLFVTVSPKLC A+KQH+S +KS A G KF AES+ +ID D+AE F DI +S
Sbjct: 1167 VAVLRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNIDYVDDAELFNDIQDSL 1226
Query: 1003 ADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIRKHY 1042
DIP +SYPLV+TFHKFLMMLDGTLG+SYF+RF D+ + Y
Sbjct: 1227 VDIPPKSYPLVVTFHKFLMMLDGTLGNSYFERFRDVWEFY 1266
>gi|359473525|ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
Length = 2792
Score = 1205 bits (3117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1056 (58%), Positives = 767/1056 (72%), Gaps = 51/1056 (4%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E C C + S+GV+ E F S SS LN+SQ +AV++CLR+++C+HK +++LIWGPPGT
Sbjct: 222 VKENCCQCPVWSDGVYAENFPMSSSSNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGT 281
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTVS+LL LL+ RTL C PTNVA+ E+A+RV+KL KES E ++LF LGDI
Sbjct: 282 GKTKTVSVLLFKLLRTNIRTLACAPTNVAVTEVASRVLKLTKESFE----NSLFCSLGDI 337
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
L+ GN +RLKV + + E+YLDYRV RL +CF PLTGW +CF SM+DFL++CVS YH +++
Sbjct: 338 LIFGNKDRLKVGADIVEVYLDYRVDRLIECFGPLTGWRYCFNSMIDFLEDCVSHYHIFLE 397
Query: 181 NESMKQSEDIN-GDIIKEK----------ECGKEADVSDVEIKPFLEFVRDRFKCIAAPL 229
NE K+ N G KE+ ECG V K F+EF RDRFK A PL
Sbjct: 398 NELRKEKSCSNEGGSTKEEVFMKNELSSNECGSSKKVD----KSFIEFARDRFKATAGPL 453
Query: 230 RSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHS-VDEG 288
R C+ FCT + K +I + NF M LI LLDSFE+LL +D++V EELE+L SH +
Sbjct: 454 RRCVQIFCTHLSKDFILEQNFQNMVDLIRLLDSFESLLSKDDVVPEELEKLFSHQEAVQD 513
Query: 289 LSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFL 348
S S LL+ R EC VL+ L+ S N+L+LPS + E L+K FC K ASL
Sbjct: 514 SSPSFSDSSNLLYMSRGECLSVLKILRGSLNKLSLPSGMN----EGLIKEFCFKMASLIF 569
Query: 349 STASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
TASSSY LHS M+PL+ LVIDEAAQLKE ESTIPLQL GI+HA+L GDECQLPAMV S
Sbjct: 570 CTASSSYKLHSANMKPLDLLVIDEAAQLKECESTIPLQLPGIRHAILIGDECQLPAMVSS 629
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
KVS EA FGRSLFERLS LG+ KHLL++QYRMHPSIS FPNS FY N+I D+ V+ +SY
Sbjct: 630 KVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSY 689
Query: 469 EKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
K +L GPM+G YSFINV G E + + S +NM+EV++V+KI+ NLYK W S +KLSI
Sbjct: 690 TKHYLSGPMFGSYSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSNQKLSI 749
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
G++SPY+AQVVAIQ+KLG KY F+VKV ++DGFQGGEED+III TVRSN GGSIGF
Sbjct: 750 GVISPYAAQVVAIQDKLGQKYEKLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGF 809
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
LSN +R NVALTRAR+CLWILGN RTL +S+WE LV DA R+CFFNAD+DKD+ AI
Sbjct: 810 LSNPQRTNVALTRARYCLWILGNERTLANSESIWEDLVLDAKKRKCFFNADEDKDIANAI 869
Query: 648 LAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNG 707
L VK E D+L+ LL+ S LF+S WKV FS+NF KSF KL SD TKKSV++LLLKLS+G
Sbjct: 870 LEVKTEFDQLNHLLDGSSILFKSAMWKVLFSDNFKKSFVKLRSDHTKKSVLNLLLKLSSG 929
Query: 708 WRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVV 767
WRPK+ NVD VC SS HI+KQFKVEG YI+C+IDIVK + QVL+VWDILPLE VPK+
Sbjct: 930 WRPKRLNVDRVCESSSHILKQFKVEGLYIVCSIDIVKNT---QVLRVWDILPLEGVPKLA 986
Query: 768 ARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAA 827
RLDNI+ + NLEVPKTW + N+++FKN ND + G++ +G +
Sbjct: 987 KRLDNIFQR----------------NLEVPKTWPTSLNIIQFKN---NDESQGNESAGTS 1027
Query: 828 FDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRS 887
D ++Y ENS VSESL LMKFY LSS +VSHLLSD GRELDLPFEVTD++ E+IL RS
Sbjct: 1028 -DGKSYVENSKVSESLLLMKFYSLSSGMVSHLLSDHDGRELDLPFEVTDQEQEIILYCRS 1086
Query: 888 TFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERP 947
TFILGRSGTGKTTVLT KLFQKE+ HRMAME F G + + + + E +GET+
Sbjct: 1087 TFILGRSGTGKTTVLTMKLFQKEQQHRMAMEGFQGDKGNASTNATYRKEVGVSVGETQVA 1146
Query: 948 ILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLID---IDDEAEFKDIPNSFAD 1004
+LRQLFVTVSPKLC+A+KQH+S +KS A G F AE S + +DD F DI +S D
Sbjct: 1147 VLRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEESSNNKDYVDDAELFDDIQDSLVD 1206
Query: 1005 IPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIRK 1040
IP +SYPLV+TFHKFLMMLD TL +SYFDRFHD+R+
Sbjct: 1207 IPPKSYPLVVTFHKFLMMLDETLSNSYFDRFHDVRE 1242
>gi|255555527|ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
gi|223542181|gb|EEF43725.1| conserved hypothetical protein [Ricinus communis]
Length = 2820
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1028 (59%), Positives = 771/1028 (75%), Gaps = 24/1028 (2%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPT 86
+LN SQ +A+L+CL +M+C+HK++++LIWGPPGTGKTKTVSMLL +LL+MK RTL C PT
Sbjct: 254 SLNVSQTEALLACLHKMQCNHKSSVELIWGPPGTGKTKTVSMLLSLLLRMKCRTLTCAPT 313
Query: 87 NVAIKELAARVVKLVKESVERDC-RDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
NVAIKE+A RV+KLV ES DAL + +G+ILL GN+ERLK+DS +EEIYLDYRV+
Sbjct: 314 NVAIKEVATRVLKLVTESQRTGSGADALIYSVGNILLFGNSERLKLDSAIEEIYLDYRVE 373
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
+L +CFAPLTGW HC S +DF ++C+S Y +++NE +K+ E+ + KEKE A+
Sbjct: 374 KLIECFAPLTGWCHCLTSTIDFFEDCISQYFIFLENEMIKEKENNHESKNKEKEFRNVAN 433
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFET 265
VS+ K FLEF R+RF A PL+ C + C IP+ YI K N + +L+ LL +F T
Sbjct: 434 VSNQGNKSFLEFARERFLSTALPLKRCALSLCIHIPESYILKHNVDNIVSLVGLLGTFGT 493
Query: 266 LLFEDNLVSEELEELLSH-SVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLP 324
LLF D+++SE+L+EL S + E S+ + LL +R EC +L+ + +S +L+LP
Sbjct: 494 LLFRDDVISEDLQELFSRPDLVEDSSQGFAEVLLLLCLKRDECLLLLKTVCNSLRKLDLP 553
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIP 384
SA+ K + FC + ASL TASSSY LHS+ +EPL+ LVIDEAAQLKE ES IP
Sbjct: 554 SAMSKGSI----VKFCFRTASLIFCTASSSYKLHSLEIEPLDLLVIDEAAQLKECESAIP 609
Query: 385 LQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSI 444
LQ++GI+HA+L GDECQLPAMVES VS EA FGRSLFERLS LG+SKHLL +QYRMHP I
Sbjct: 610 LQIAGIRHAILIGDECQLPAMVESVVSGEAGFGRSLFERLSTLGHSKHLLDMQYRMHPFI 669
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF--IEHSCRNMV 502
S FPNS FY N+I D+S V+ + YEK L GPM+GPYSFINVF GREE I HS +NMV
Sbjct: 670 SRFPNSRFYFNQILDASNVKCKVYEKHPLPGPMFGPYSFINVFDGREEMDNIGHSWKNMV 729
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
EV++V+KI+ L+KAW S + L+IG++SPY+AQV AI++KL KY + GF+VKV S+D
Sbjct: 730 EVAIVLKIVRRLHKAWNGSNKNLTIGVISPYAAQVNAIRDKLNKKYEDIYGFSVKVRSVD 789
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
GFQGGEED+II+STVR+N+GG++GFLSN +R+NVALTRARHCLWILGN RTL S+W+
Sbjct: 790 GFQGGEEDIIILSTVRANSGGAVGFLSNPQRINVALTRARHCLWILGNERTLINSDSIWK 849
Query: 623 ALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFL 682
LV DA RQCFFN D+DK+L K IL VKKE D+L++LL +S F+S RWKV FSENF
Sbjct: 850 ELVFDAKQRQCFFNVDEDKELAKTILEVKKEFDQLNDLLTGDSAFFKSARWKVLFSENFR 909
Query: 683 KSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDI 742
KSF KL+S K S ++LLLKLS+GWRPK +NVDS+C S ++KQ+KVEG YIIC+IDI
Sbjct: 910 KSFGKLSSVRKKTSALNLLLKLSSGWRPKTKNVDSIC-HSYRLLKQYKVEGLYIICSIDI 968
Query: 743 VKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTA 802
VKE Y QVLKVWDILPLED+P++ RLD I+ YT +F+N CKEK +EGNLEVPKTW+
Sbjct: 969 VKERMYTQVLKVWDILPLEDIPRLAKRLDGIFGSYTDDFMNRCKEKCLEGNLEVPKTWST 1028
Query: 803 TSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSD 862
+ ++VR+K+L +N+ GS+LS D Y ENS V++SL LMKFY LSS VVSHLLSD
Sbjct: 1029 SIDIVRYKSLGNNE--VGSNLSS---DDGCYVENSKVTDSLLLMKFYSLSSGVVSHLLSD 1083
Query: 863 RVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYG 922
R GREL+LPFEVTDE+LE+IL RSTFILGRSGTGKTT+LT KLF+KE+++ MAME +
Sbjct: 1084 RDGRELELPFEVTDEELEIILLQRSTFILGRSGTGKTTILTMKLFKKEQIYHMAMEGYDD 1143
Query: 923 VNNSVTLH-------CSQESEAEEGLGETERPILRQLFVTVSPKLCFAIKQHISQMKSSA 975
N + + AE +G + +L QLFVTVSPKLC+A+K +SQ+K A
Sbjct: 1144 ENGKTSKEIFLKDRKVDETKTAESSIGGAKNAVLHQLFVTVSPKLCYAVKHQVSQLKRFA 1203
Query: 976 FGGK-FVAESS--LIDIDDEAEFKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSSYF 1032
GGK FV SS + DIDD A+FKDIP+S DIP ES+PLVITF KFLMMLDGT+G+SYF
Sbjct: 1204 SGGKCFVGSSSIDMEDIDDTAQFKDIPDSLIDIPPESFPLVITFFKFLMMLDGTIGNSYF 1263
Query: 1033 DRFHDIRK 1040
+RF D R+
Sbjct: 1264 ERFPDARQ 1271
>gi|147865014|emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
Length = 2676
Score = 1189 bits (3076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1060 (57%), Positives = 763/1060 (71%), Gaps = 39/1060 (3%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E C + S+G + + F SLSS LN+SQ QAVL+CLR+++ +HK +++LIWGPPGT
Sbjct: 231 VKENYYQCPVWSDGGYAKKFALSLSSNLNESQNQAVLACLRKIQYNHKPSVELIWGPPGT 290
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKTKTVS+LL LL+M RTL C PTN+AI E+ +RV+KL +ES E D +++F LGD
Sbjct: 291 GKTKTVSVLLYALLRMNIRTLACAPTNIAITEVVSRVLKLREESFENDLGANSMFCSLGD 350
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
ILL GN RLK S + E+YLDYRV RL +C P+TGW H F SM+DFL++CVS Y ++
Sbjct: 351 ILLFGNKSRLKAHSDIVEVYLDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFL 410
Query: 180 DNESMKQSEDING-----------DIIKEKEC--GKEADVSDVEIKPFLEFVRDRFKCIA 226
+NES K+ N + + EC K+ D+S F+EF RDRF+ A
Sbjct: 411 ENESRKEKSCSNKSGSTKEAVFMKNELSSNECESTKKVDIS------FIEFARDRFRATA 464
Query: 227 APLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVD 286
PLR C+ FCT +PK +I K NF M LI LLDSFE+LL +DB+V EELE L SH
Sbjct: 465 GPLRRCVRIFCTHLPKSFILKQNFQNMVYLIQLLDSFESLLSKDBVVPEELERLFSHQ-- 522
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
E + S LL+ R EC VL+ L+SS NELNLPS + K L+ K FC K ASL
Sbjct: 523 EAVRDSYSDSSDLLYVHRGECLSVLKTLRSSLNELNLPSXMNKGLI----KQFCFKMASL 578
Query: 347 FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMV 406
TASSSY L+ V M+PL+ LVIDEAAQLKE ES IPLQL I+HA+L GDECQLPAMV
Sbjct: 579 IFCTASSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQLPAMV 638
Query: 407 ESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR 466
S EA FGRSLFERLS LG+ KHLL++QYRMHPSIS FPNS FY N+I D+ V+ +
Sbjct: 639 ----SKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSK 694
Query: 467 SYEKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
SY K +L GPM+G YSFINV G E + + S +NM+EV++V+KI+ NLYK W S +KL
Sbjct: 695 SYTKHYLSGPMFGSYSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSNQKL 754
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
SIG+VSPY+AQVVA+Q+ LG KY N FAVKV ++DGFQ GEED+II STVR+N+ GSI
Sbjct: 755 SIGVVSPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIXSTVRANSHGSI 814
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGK 645
GFLSN +R NVALTRARHCLWILGN RTL + +S WE LV DA R+ FFNAD+DKD+ K
Sbjct: 815 GFLSNPQRTNVALTRARHCLWILGNERTLAKSESXWEDLVCDAKXRKRFFNADEDKDMAK 874
Query: 646 AILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLS 705
AIL +K E D+LD LL+ S LF++ RWKV FS NF KSF KL SD TKKSV+ LLL LS
Sbjct: 875 AILEIKXEFDQLDRLLDGSSILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNLS 934
Query: 706 NGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPK 765
+GWRPK+ N+D VC SS I+KQFKVEGFY +C+ID VK + QVL+VWDILPLED+ K
Sbjct: 935 SGWRPKRLNIDRVCXSSSQILKQFKVEGFYXVCSIDXVKNT---QVLRVWDILPLEDIXK 991
Query: 766 VVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSG 825
+V LDNI+ +YT +FIN CKEK ++ NLEVP+TW +S++V+FKN + S + S
Sbjct: 992 LVKHLDNIFQRYTDDFINRCKEKCLDXNLEVPRTWATSSDIVQFKNFCKEE--SQGNESA 1049
Query: 826 AAFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSP 885
AFD R+Y ENS VSESL LMKFY LS+ +V HLLSD GRELDLPFEVTD++ ++IL
Sbjct: 1050 DAFDGRSYVENSKVSESLLLMKFYSLSTGMVRHLLSDHDGRELDLPFEVTDQEQDIILYY 1109
Query: 886 RSTFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETE 945
RSTFILGRSGTGKTTVLT KLFQKE+ H MAME F + + + + +E +G+ +
Sbjct: 1110 RSTFILGRSGTGKTTVLTMKLFQKEQQHHMAMEGFQEDKGNASTNATYRNEVGTSVGKIQ 1169
Query: 946 RPILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLIDID--DEAE-FKDIPNSF 1002
+LRQLFVTVSPKLC A+KQH+S +KS A G KF AES+ +ID D+ E F DI +S
Sbjct: 1170 VAVLRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNIDYVDDXELFNDIQDSL 1229
Query: 1003 ADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIRKHY 1042
DIP +SYPLV+TFHKFLMMLDGTL +SYF+RF D+ + Y
Sbjct: 1230 VDIPPKSYPLVVTFHKFLMMLDGTLXNSYFERFXDVWEFY 1269
>gi|356510822|ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
Length = 2812
Score = 1179 bits (3050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1048 (56%), Positives = 775/1048 (73%), Gaps = 19/1048 (1%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V+E+CE S+Q + V ++ LSS LN SQ +A+ +CL ++C HK+T+ LIWGPPGT
Sbjct: 216 VEESCEYFSLQPDYVKDDRTYQRLSSELNGSQYEAIWACLSSIQCCHKSTVDLIWGPPGT 275
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKT+ LL LL+M RTLVC PTNVA+KE+A+RV+ +V+ES +R+ +ALF LGD+
Sbjct: 276 GKTKTLGTLLYALLKMNHRTLVCAPTNVAVKEVASRVLSMVRESFDRNS-EALFCALGDM 334
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
+L GN+ERLKV + +E+IYLDYRVK L CFAPLTGW CF+SM+D L+NCVS YH +I+
Sbjct: 335 VLFGNHERLKVGADIEDIYLDYRVKHLMMCFAPLTGWRCCFSSMIDLLENCVSHYHIFIE 394
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEI--KPFLEFVRDRFKCIAAPLRSCIFNFCT 238
NE K E ++ + + + + S+ E K FLEFVR+RF +A LR CI CT
Sbjct: 395 NELRKDQEQVSDNNFNKTKDNSTSHCSETEKVHKTFLEFVRERFLSVAVQLRDCISVLCT 454
Query: 239 RIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVD-EGLSKSIVGIK 297
+ + YI NF + LI + SFE LLF+ N+VSE LE+L S +S VG++
Sbjct: 455 HVARSYILDHNFEDLVCLIHKVSSFEALLFQSNIVSEVLEKLFSPPEHLHNSCESSVGVE 514
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
YLL+K R++C LR L+ S +EL+LP+++ K+ + + FCL+ +SL STASSS+ L
Sbjct: 515 YLLYKSRTDCLSSLRTLKGSLDELSLPNSMNKESI----REFCLQTSSLIFSTASSSFKL 570
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
HSV MEPL LVIDEAAQLKE ES IPL L ++HAVL GDECQLPAMV S VS++ FG
Sbjct: 571 HSVVMEPLKVLVIDEAAQLKECESIIPLLLPNVEHAVLVGDECQLPAMVASNVSHKVGFG 630
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLF RLS LG+ H L+IQYRMHP+IS FPNS+FY N+I D+ V +++Y K++L GPM
Sbjct: 631 RSLFARLSSLGHPNHFLNIQYRMHPAISSFPNSHFYFNQILDAPNVVRKNYRKQYLPGPM 690
Query: 478 YGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+GPYSFINV GG EEF + S +NMVEV++VMKI+ N +KAW DSKE LSIG+VSPY+A
Sbjct: 691 FGPYSFINVVGGIEEFDDAGRSRKNMVEVAIVMKIIKNCFKAWCDSKENLSIGVVSPYAA 750
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QVVAIQ+ LG +Y GF VKV +IDGFQGGE D+II+STVR+N+ S+ F+SN +R N
Sbjct: 751 QVVAIQDLLGQRYDTHDGFDVKVKTIDGFQGGERDIIILSTVRTNHSTSLQFISNHQRTN 810
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELD 655
VALTRAR+CLW+LGN RTLT +++VW++LV DA R+CFFNAD+DK+L K+I KKELD
Sbjct: 811 VALTRARYCLWVLGNERTLTNEENVWKSLVLDAKKRRCFFNADEDKELAKSIWDTKKELD 870
Query: 656 ELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNV 715
+LD+LLNP+S LF+ RWKV FS+NFLKSF+KL S TKK V+ LLLKLS GWRPK+ V
Sbjct: 871 QLDDLLNPDSFLFKKSRWKVLFSDNFLKSFKKLRSKQTKKLVLDLLLKLSTGWRPKRMKV 930
Query: 716 DSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYV 775
D +CG+S I+KQFKVE +++C+ DIVKES Y QVLK+WDI+PLEDVPK+V RLDNI+
Sbjct: 931 DLLCGNSSQILKQFKVESLFVVCSTDIVKESMYTQVLKIWDIMPLEDVPKLVKRLDNIFG 990
Query: 776 KYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAE 835
YT EFI+ C EK +EGN+ VP +W ++ + +FK L +N N ++LSG D R Y E
Sbjct: 991 SYTDEFISCCSEKCLEGNMVVPISWERSTEITKFKTLDNNGNE--AELSGC--DQRIYVE 1046
Query: 836 NSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSG 895
NS V ESL LMKFY LSSVV+SHLLSDR+ E DLPFEV+DE+ ++IL P+STF+LGRSG
Sbjct: 1047 NSKVEESLLLMKFYSLSSVVISHLLSDRISDEFDLPFEVSDEEYDIILFPKSTFVLGRSG 1106
Query: 896 TGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
TGKTTVLT KLFQKE H MA+EE YG+N++ + + E ++ +RP+L QLFVT
Sbjct: 1107 TGKTTVLTVKLFQKEYKHHMAVEETYGINSAAVPCLNHDKEYKKSSTTNDRPVLHQLFVT 1166
Query: 956 VSPKLCFAIKQHISQMKSSAFGGKFVAESS-----LIDIDDEAEFKDIPNSFADIPAESY 1010
VSPKLC A+K H+ ++K GG AES+ ++D+D +FK+ P+SF ++P +SY
Sbjct: 1167 VSPKLCQAVKHHVVRLKRFVCGGNIAAESNSIEEDIVDVDTSIQFKNTPDSFMNLPIDSY 1226
Query: 1011 PLVITFHKFLMMLDGTLGSSYFDRFHDI 1038
PLVITF KFLMMLDGT+G SYF+RF D+
Sbjct: 1227 PLVITFQKFLMMLDGTVGISYFERFSDL 1254
>gi|297738288|emb|CBI27489.3| unnamed protein product [Vitis vinifera]
Length = 2562
Score = 1175 bits (3040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/1044 (58%), Positives = 744/1044 (71%), Gaps = 89/1044 (8%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E C C + S+GV+ E F S SS LN+SQ +AV++CLR+++C+HK +++LIWGPPGT
Sbjct: 222 VKENCCQCPVWSDGVYAENFPMSSSSNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGT 281
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTVS+LL LL+ RTL C PTNVA+ E+A+RV+KL KES E ++LF LGDI
Sbjct: 282 GKTKTVSVLLFKLLRTNIRTLACAPTNVAVTEVASRVLKLTKESFE----NSLFCSLGDI 337
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
L+ GN +RLKV + + E+YLDYRV RL +CF PLTGW +CF SM+DFL++CVS YH +++
Sbjct: 338 LIFGNKDRLKVGADIVEVYLDYRVDRLIECFGPLTGWRYCFNSMIDFLEDCVSHYHIFLE 397
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
NE + KEK C E DRFK A PLR C+ FCT +
Sbjct: 398 NE-----------LRKEKSCSNE----------------DRFKATAGPLRRCVQIFCTHL 430
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLL 300
K +I + NF M LI LLDSFE + + S S LL
Sbjct: 431 SKDFILEQNFQNMVDLIRLLDSFEKAV-------------------QDSSPSFSDSSNLL 471
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
+ R EC VL+ L+ S N+L+LPS + E L+K FC K ASL TASSSY LHS
Sbjct: 472 YMSRGECLSVLKILRGSLNKLSLPSGMN----EGLIKEFCFKMASLIFCTASSSYKLHSA 527
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
M+PL+ LVIDEAAQLKE ESTIPLQL GI+HA+L GDECQLPAMV SKVS EA FGRSL
Sbjct: 528 NMKPLDLLVIDEAAQLKECESTIPLQLPGIRHAILIGDECQLPAMVSSKVSKEAGFGRSL 587
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
FERLS LG+ KHLL++QYRMHPSIS FPNS FY N+I D+ V+ +SY K +L GPM+G
Sbjct: 588 FERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGS 647
Query: 481 YSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
YSFINV G E + + S +NM+EV++V+KI+ NLYK W S +KLSIG++SPY+AQVVA
Sbjct: 648 YSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSNQKLSIGVISPYAAQVVA 707
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
IQ+KLG KY F+VKV ++DGFQGGEED+III TVRSN GGSIGFLSN +R NVALT
Sbjct: 708 IQDKLGQKYEKLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALT 767
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RAR+CLWILGN RTL +S+WE LV DA R+CFFNAD+DKD+ AIL VK E D+L+
Sbjct: 768 RARYCLWILGNERTLANSESIWEDLVLDAKKRKCFFNADEDKDIANAILEVKTEFDQLNH 827
Query: 660 LLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVC 719
LL+ S LF+S WKV FS+NF KSF KL SD TKKSV++LLLKLS+GWRPK+ NVD VC
Sbjct: 828 LLDGSSILFKSAMWKVLFSDNFKKSFVKLRSDHTKKSVLNLLLKLSSGWRPKRLNVDRVC 887
Query: 720 GSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTA 779
SS HI+KQFKVEG YI+C+IDIVK + QVL+VWDILPLE VPK+ RLDNI+ +YT
Sbjct: 888 ESSSHILKQFKVEGLYIVCSIDIVKNT---QVLRVWDILPLEGVPKLAKRLDNIFQRYTD 944
Query: 780 EFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNV 839
+FIN C EK ++GNLEVPKTW + N+++FKN ND + G++ +G + D ++Y ENS V
Sbjct: 945 DFINCCNEKCLDGNLEVPKTWPTSLNIIQFKN---NDESQGNESAGTS-DGKSYVENSKV 1000
Query: 840 SESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKT 899
SESL LMKFY LSS +VSHLLSD GRELDLPFEVTD++ E+IL RSTFILGRSGTGKT
Sbjct: 1001 SESLLLMKFYSLSSGMVSHLLSDHDGRELDLPFEVTDQEQEIILYCRSTFILGRSGTGKT 1060
Query: 900 TVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPK 959
TVLT KLFQKE+ HRMAME ET+ +LRQLFVTVSPK
Sbjct: 1061 TVLTMKLFQKEQQHRMAME------------------------ETQVAVLRQLFVTVSPK 1096
Query: 960 LCFAIKQHISQMKSSAFGGKFVAESSLID---IDDEAEFKDIPNSFADIPAESYPLVITF 1016
LC+A+KQH+S +KS A G F AE S + +DD F DI +S DIP +SYPLV+TF
Sbjct: 1097 LCYAVKQHVSHLKSFAHGKNFSAEESSNNKDYVDDAELFDDIQDSLVDIPPKSYPLVVTF 1156
Query: 1017 HKFLMMLDGTLGSSYFDRFHDIRK 1040
HKFLMMLD TL +SYFDRFHD+R+
Sbjct: 1157 HKFLMMLDETLSNSYFDRFHDVRE 1180
>gi|297738290|emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/1040 (57%), Positives = 735/1040 (70%), Gaps = 85/1040 (8%)
Query: 8 CSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVS 67
C + +G + + F SLSS LN+SQ QAVL+CLR+++ +HK +++LIWGPPGTGKTKTV
Sbjct: 3690 CPVWIDGGYAKKFALSLSSNLNESQNQAVLACLRKIQYNHKPSVELIWGPPGTGKTKTVG 3749
Query: 68 MLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGDILLLGNN 126
+LL LL+M RTL C PTN+AI E+ +RV+KL +E E D +++F LGDILL GN
Sbjct: 3750 VLLYTLLRMNIRTLACAPTNIAITEVVSRVLKLREEPFENDLGANSMFCSLGDILLFGNK 3809
Query: 127 ERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQ 186
RLK S + E+YLDYRV RL +C P+TGW H F SM+DFL++CVS Y +++NES K+
Sbjct: 3810 SRLKAHSDIVEVYLDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFLENESRKE 3869
Query: 187 SEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
DI+ F+EF RDRF+ A PLR C
Sbjct: 3870 KMDIS----------------------FIEFARDRFRATAGPLRRC-------------- 3893
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSE 306
LLDSFET+ + S S D LL+ R E
Sbjct: 3894 ------------LLDSFETV-----------RDSYSDSSD------------LLYVHRGE 3918
Query: 307 CHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLN 366
C VL+ L+SS NELNLPSA+ K L+ K FC K ASL TASSSY L+ V M+PL+
Sbjct: 3919 CLSVLKTLRSSLNELNLPSAMNKGLI----KQFCFKMASLIFCTASSSYQLYRVNMKPLD 3974
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
LVIDEAAQLKE ES IPLQL I+HA+L GDECQLPAMV SKVS EA FGRSLFERLS
Sbjct: 3975 LLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSS 4034
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG+ KHLL++QYRMHPSIS FPNS FY N+I D+ V+ +SY K +L GPM+G YSFINV
Sbjct: 4035 LGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV 4094
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E + + S +NM+EV++V+KI+ NLYK W S +KLSIG++SPY+AQVVA+Q+ LG
Sbjct: 4095 RGKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSNQKLSIGVISPYAAQVVAVQDNLG 4154
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
KY N FAVKV ++DGFQ GEED+II+STVR+N+ GSIGFLSN +R NVALTRARHCL
Sbjct: 4155 EKYENLDNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCL 4214
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
WILGN RTL + +SVWE LV DA R+ FFNAD+DKD+ KAIL +K E D+LD LL+ S
Sbjct: 4215 WILGNERTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAKAILEIKTEFDQLDRLLDGSS 4274
Query: 666 RLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHI 725
LF++ RWKV FS NF KSF KL SD TKKSV+ LLL LS+GWRPK+ N+D VCGSS I
Sbjct: 4275 ILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNLSSGWRPKRLNIDRVCGSSSQI 4334
Query: 726 IKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHC 785
+KQFKVEGFYI+C+IDIVK + QVL+VWDILPLED+ K+V LDNI+ +YT +FIN C
Sbjct: 4335 LKQFKVEGFYIVCSIDIVKNT---QVLRVWDILPLEDILKLVKHLDNIFQRYTDDFINRC 4391
Query: 786 KEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSL 845
KEK ++ NLEVP+TW +S++V+FKN + S + S AFD R+Y ENS VSESL L
Sbjct: 4392 KEKCLDRNLEVPRTWATSSDIVQFKNFCKEE--SQGNESADAFDGRSYVENSKVSESLLL 4449
Query: 846 MKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRK 905
MKFY LS+ +V HLLSD GRELDLPFEVTD++ ++IL RSTFILGRSGTGKTTVLT K
Sbjct: 4450 MKFYSLSTGMVRHLLSDHDGRELDLPFEVTDQEQDIILYYRSTFILGRSGTGKTTVLTMK 4509
Query: 906 LFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAIK 965
LFQKE+ H MAME F + + + + +E +G+ + +LRQLFVTVSPKLC A+K
Sbjct: 4510 LFQKEQQHHMAMEGFQEDKGNASTNATYRNEVGTSVGKIQVAVLRQLFVTVSPKLCHAVK 4569
Query: 966 QHISQMKSSAFGGKFVAESSLIDID--DEAE-FKDIPNSFADIPAESYPLVITFHKFLMM 1022
QH+S +KS A G KF AES+ +ID D+AE F DI +S DIP +SYPLV+TFHKFLMM
Sbjct: 4570 QHVSHLKSFAHGKKFSAESNSNNIDYVDDAELFNDIQDSLVDIPPKSYPLVVTFHKFLMM 4629
Query: 1023 LDGTLGSSYFDRFHDIRKHY 1042
LDGTLG+SYF+RF D+ + Y
Sbjct: 4630 LDGTLGNSYFERFRDVWEFY 4649
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 321/701 (45%), Positives = 411/701 (58%), Gaps = 122/701 (17%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E+CELC S GV ETFG LSS LN SQ AVL+ LR++ C+HK++++LI GPPGT
Sbjct: 1572 VKESCELCPESSRGVRTETFGTILSSKLNKSQMAAVLASLRKIHCNHKSSVELICGPPGT 1631
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKT+T+S LL LL RTL C PT VA+KE+A+RV+K +KE
Sbjct: 1632 GKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMKHLKE----------------- 1674
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
LA CF PL GW H F SM+ FL+
Sbjct: 1675 --------------------------LAKCFEPLNGWRHSFNSMIVFLEG---------- 1698
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
++FK + LR + T I
Sbjct: 1699 ---------------------------------------EQFKSTSLHLREVVITLSTHI 1719
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLL 300
PK +I + NF M +L+ L SFE+LL +DN+VSEELE L + + S V L
Sbjct: 1720 PKSFIMEHNFQAMLSLLGFLRSFESLLHQDNMVSEELENLFAGKKNVKHSSKSVADSSTL 1779
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
+ RSEC +L+ L++S +EL P KDLL D FC + AS STAS S+ LH V
Sbjct: 1780 MEIRSECLHILKNLRNSLDELQFPKNNSKDLLID----FCFQTASSIFSTASDSHKLHLV 1835
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
M+PLN LVIDEAAQL+E ESTIPLQL GIK A+L GD+ QLP+ V S + + A FGRSL
Sbjct: 1836 DMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQLPSRVTSNICDRAGFGRSL 1895
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
+ERLS L ++KH L++QYRMHPSIS FP S FY N+I D+ V+ ++YEK++L P++ P
Sbjct: 1896 YERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRP 1955
Query: 481 YSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKA--WIDSKEK------------ 524
Y FIN+ GREE E HS +NMVEV+V+MKI+ NLY+ I SK +
Sbjct: 1956 YLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQESLAISSKRQLCFFLFVSIPLL 2015
Query: 525 ----------LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
L IG++S Y+AQV+ IQE+ KY N+ F+VKV +IDGFQGGEED+I+I
Sbjct: 2016 ALEIQSERTLLRIGVLSSYTAQVLEIQERFRQKYENNDRFSVKVQTIDGFQGGEEDIILI 2075
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
STVR+NN GS+G +++ K NVALTRARH LWILG+ RTL ++VW+ +VHDA R C
Sbjct: 2076 STVRANNFGSVGVMADVKITNVALTRARHGLWILGSERTLVMSETVWKDIVHDAKDRHCL 2135
Query: 635 FNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKV 675
NAD+D DL I VK ELDELD+LLN +S LF S RWKV
Sbjct: 2136 LNADEDCDLANTIFKVKTELDELDDLLNKDSSLFNSARWKV 2176
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/238 (57%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE--HS 497
MHPSIS FP S FY N+I D+ V+ ++YEK++L P++ Y FIN+ GREE E HS
Sbjct: 1 MHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREEVDEVGHS 60
Query: 498 CRNMVEVSVVMKILLNLYKAWIDS-KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
+NMVEV+V+MKI+ NLY+AW KE+L IG++SPY+AQV+ IQE+L KY N+ F+V
Sbjct: 61 VKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYENNDMFSV 120
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
KV +IDGFQGGEED+I+ISTVR+NN GS+G +++ K NVALTRARHCLWILG+ RTL
Sbjct: 121 KVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSERTLVM 180
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWK 674
++VW+ +VHDA R C NAD+D DL + VK EL ELD+LLN +S LF S RWK
Sbjct: 181 SETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELHELDDLLNRDSSLFNSARWK 238
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 169/250 (67%), Gaps = 18/250 (7%)
Query: 794 LEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSLMKFYRLSS 853
LE+P +WT + ++V++K+L++N S++SG A R ENS VSES +MKFY ++
Sbjct: 242 LEIPMSWTTSYDIVQYKSLSNNATGKISNVSGLA--RRGGFENSIVSESFLIMKFYSVTF 299
Query: 854 VVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRKLFQKEELH 913
+V H +S GRELDLPFE+TD++ E I RS+FILGRSGTGKTTVL+ KLFQKE+L
Sbjct: 300 NMVRHFISGHDGRELDLPFELTDQERETIFFNRSSFILGRSGTGKTTVLSMKLFQKEQLF 359
Query: 914 RMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAIKQHISQMKS 973
+A E Y V + H SQ +E E G+ + L QLFVTVSP+L
Sbjct: 360 HIASEGLYEVEGHSSTHASQRNEIGECTGDAKGACLHQLFVTVSPRLF------------ 407
Query: 974 SAFGGKFVAESSLID---IDDEAEFKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSS 1030
A GG+F+ ESS +D IDD +FKDIP+SF +IP++SYPLVITFHKFLMMLDGT+G+S
Sbjct: 408 -ASGGEFLVESSSLDLDYIDDTVQFKDIPDSFVNIPSKSYPLVITFHKFLMMLDGTVGNS 466
Query: 1031 YFDRFHDIRK 1040
YF RF D K
Sbjct: 467 YFSRFPDAHK 476
>gi|449445371|ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212468 [Cucumis sativus]
Length = 2710
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1044 (54%), Positives = 727/1044 (69%), Gaps = 32/1044 (3%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
+ S S+LN SQ +AVLS L + +H++ + L+WGPPGTGKTKTVS+LL+ L+Q +
Sbjct: 154 QNLNASFLSSLNASQERAVLSSLYKTNFEHESNVDLVWGPPGTGKTKTVSVLLLNLMQNR 213
Query: 78 FRTLVCTPTNVAIKELAARVVKLVKESVERD-CRDALFFPLGDILLLGNNERLKVDSGVE 136
+T++ PTNVAI E+A RV+ LVKE E + D L++ GDILL GN ERLK+ S VE
Sbjct: 214 CKTIIVAPTNVAIVEVATRVLNLVKELHEIEYGPDYLYYSFGDILLFGNKERLKLGSNVE 273
Query: 137 EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQS--EDINGDI 194
E+YLDYRV++L +CF P+TGW HCF SM D L +CVS Y+ +++NE +KQ +D D
Sbjct: 274 EMYLDYRVQKLLECFDPITGWRHCFGSMTDLLGDCVSQYNIFLENE-LKQKCLDDKETD- 331
Query: 195 IKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMA 254
EK C + V K FLEF R+RF +A+ LR C+ F T +P+ I K +
Sbjct: 332 --EKGCISKDKDDKVASKSFLEFARERFMSVASQLRMCLAIFSTHLPRKCILKLGLKDLV 389
Query: 255 TLISLLDSFETLLFEDNLVSEELEELLSHSV-DEGLSKSIVGIKYLLHKRRSECHFVLRK 313
+L LD FE LLF+ ++VS LE+L SV EG + L RS C L+
Sbjct: 390 SLSKSLDCFEDLLFQQSVVSNVLEDLFKCSVVSEGFPTTCTDFACLFDMARSGCLSGLKS 449
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH------SVAMEPLNF 367
L S L LP A+ + +E FC + ASL STASSSY LH S +M
Sbjct: 450 LHCSLTALKLPRAINRLSIE----HFCFQNASLVFSTASSSYRLHYKYRLDSKSMPSFKV 505
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
LVIDEAAQLKE ES I Q+ KHAVL GDECQLPAM+ ++ A FGRSLF R L
Sbjct: 506 LVIDEAAQLKECESIIAFQIPDFKHAVLIGDECQLPAML----ADNAGFGRSLFARYCSL 561
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ +HLL++QYRMHPSIS FPNS FY ++I D V+ +Y+K +L G M+GPYSFIN+
Sbjct: 562 GHPRHLLNVQYRMHPSISFFPNSKFYFSQILDGPNVQSSNYQKNYLLGSMFGPYSFINIK 621
Query: 488 GGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE I HS +NM+EV+V +KI+ +LYKAW +S+ KLSIGI+SPYSAQV I++K+G
Sbjct: 622 YGKEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKNSRRKLSIGIISPYSAQVATIRDKIG 681
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
+Y GF VKV S+DGFQGGEED+IIISTVRSN G S+GFLS +R NVALTRAR+CL
Sbjct: 682 HRYDKLDGFWVKVKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRTNVALTRARYCL 741
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
WILGN +TL+ +S W LV DA R CFFNADDD++L KAI+ VKKE ++LD+LL +S
Sbjct: 742 WILGNDKTLSNSESSWAHLVCDAKDRGCFFNADDDENLAKAIVDVKKEFNQLDDLLKGDS 801
Query: 666 RLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHI 725
LFR+ RWKV FS+ FLKSF+KL++ KK V++LLLKLS+GWRPK R+++ VCGSS I
Sbjct: 802 ILFRNARWKVLFSDRFLKSFKKLSAVEMKKKVLNLLLKLSSGWRPKTRDLNLVCGSSTRI 861
Query: 726 IKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHC 785
+K+ KVE Y+IC+IDIVKES Y QVL++WD+LPLED+ K+V LD+I+ YT E++N C
Sbjct: 862 LKKIKVERIYVICSIDIVKESAYMQVLRIWDVLPLEDISKLVKHLDSIFSSYTDEYVNLC 921
Query: 786 KEKSIEGN-LEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLS 844
+E +G+ LEVPKTW S +VR+K+ DN N +L GAA+D R+Y ENS V +SL
Sbjct: 922 QEICYDGDFLEVPKTWAFMSELVRYKSHVDNSNE--DNLQGAAYDGRSYVENSKVKDSLL 979
Query: 845 LMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTR 904
LMKFY LS VVSHLLSDR G ELDLPFEVT+E+L++IL PRSTFILGRSGTGKTTVLT
Sbjct: 980 LMKFYSLSFGVVSHLLSDRDGIELDLPFEVTEEELDIILYPRSTFILGRSGTGKTTVLTM 1039
Query: 905 KLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAI 964
KL+QKE+LH + YG + V+ Q+SE E +LRQLF+TVSPKLC+A+
Sbjct: 1040 KLYQKEKLHYLVTGS-YGTEDGVSSEAGQKSEISEIPAAENGAVLRQLFLTVSPKLCYAV 1098
Query: 965 KQHISQMKSSAFGG--KFVAESSLIDIDD-EAEFKDIPNSFADIPAESYPLVITFHKFLM 1021
+QH+S +KS A GG K + ++DD EA+F D+P+S A+I +SYPLVITF+KFLM
Sbjct: 1099 RQHVSHLKSYACGGDTKRTTAFDMENMDDLEAQFTDVPDSLANITTKSYPLVITFYKFLM 1158
Query: 1022 MLDGTLGSSYFDRFHDIRK-HYGQ 1044
MLD TL +SYF RF D R+ YGQ
Sbjct: 1159 MLDRTLCNSYFQRFCDARQLLYGQ 1182
>gi|449526710|ref|XP_004170356.1| PREDICTED: uncharacterized protein LOC101229717 [Cucumis sativus]
Length = 2474
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1086 (52%), Positives = 728/1086 (67%), Gaps = 74/1086 (6%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
+ S S+LN SQ +AVLS L + +H++ + L+WGPPGTGKTKTVS+LL+ L+Q +
Sbjct: 154 QNLNASFLSSLNASQERAVLSSLYKTNFEHESNVDLVWGPPGTGKTKTVSVLLLNLMQNR 213
Query: 78 FRTLVCTPTNVAIKELAARVVKLVKESVERDCR-DALFFPLGDILLLGNNERLKVDSGVE 136
+T++ PTNVAI E+A RV+ LVKE E + D L++ GDILL GN ERLK+ S VE
Sbjct: 214 CKTIIVAPTNVAIVEVATRVLNLVKELHEIEYGPDYLYYSFGDILLFGNKERLKLGSNVE 273
Query: 137 EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQS--EDINGDI 194
E+YLDYRV++L +CF P+TGW HCF SM D L +CVS Y+ +++NE +KQ +D D
Sbjct: 274 EMYLDYRVQKLLECFDPITGWRHCFGSMTDLLGDCVSQYNIFLENE-LKQKCLDDKETD- 331
Query: 195 IKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMA 254
EK C + V K FLEF R+RF +A+ LR C+ F T +P+ I K +
Sbjct: 332 --EKGCISKDKDDKVASKSFLEFARERFMSVASQLRMCLAIFSTHLPRKCILKLGLKDLV 389
Query: 255 TLISLLDSFETLLFEDNLVSEELEELLSHSV-DEGLSKSIVGIKYLLHKRRSECHFVLRK 313
+L LD FE LLF+ ++VS LE+L SV EG + L RS C L+
Sbjct: 390 SLSKSLDCFEDLLFQQSVVSNVLEDLFKCSVVSEGFPTTCTDFACLFDMARSGCLSGLKS 449
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH------SVAMEPLNF 367
L S L LP A+ + +E FC + ASL STASSSY LH S +M
Sbjct: 450 LHCSLTALKLPRAINRLSIE----HFCFQNASLVFSTASSSYRLHYKYRLDSKSMPSFKV 505
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
LVIDEAAQLKE ES I Q+ KHAVL GDECQLPAM+ ++ A FGRSLF R L
Sbjct: 506 LVIDEAAQLKECESIIAFQIPDFKHAVLIGDECQLPAML----ADNAGFGRSLFARYCSL 561
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ +HLL++QYRMHPSIS FPNS FY ++I D V+ +Y+K +L G M+GPYSFIN+
Sbjct: 562 GHPRHLLNVQYRMHPSISFFPNSKFYFSQILDGPNVQSSNYQKNYLLGSMFGPYSFINIK 621
Query: 488 GGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE I HS +NM+EV+V +KI+ +LYKAW +S+ KLSIGI+SPYSAQV I++K+G
Sbjct: 622 YGKEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKNSRRKLSIGIISPYSAQVATIRDKIG 681
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
+Y GF VKV S+DGFQGGEED+IIISTVRSN G S+GFLS +R NVALTRAR+CL
Sbjct: 682 HRYDKLDGFWVKVKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRTNVALTRARYCL 741
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
WILGN +TL+ +S W LV DA R CFFNADDD++L KAI+ VKKE ++LD+LL +S
Sbjct: 742 WILGNDKTLSNSESSWAHLVCDAKDRGCFFNADDDENLAKAIVDVKKEFNQLDDLLKGDS 801
Query: 666 RLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHI 725
LFR+ RWKV FS+ FLKSF+KL++ KK V++LLLKLS+GWRPK R+++ VCGSS I
Sbjct: 802 ILFRNARWKVLFSDRFLKSFKKLSAVEMKKKVLNLLLKLSSGWRPKTRDLNLVCGSSTRI 861
Query: 726 IKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHC 785
+K+ KVE Y+IC+IDIVKES Y QVL++WD+LPLED+ K+V LD+I+ YT E++N C
Sbjct: 862 LKKIKVERIYVICSIDIVKESAYMQVLRIWDVLPLEDISKLVKHLDSIFSSYTDEYVNLC 921
Query: 786 KEKSIEGN-LEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLS 844
+E +G+ LEVPKTW S +VR+K+ DN N +L GAA+D R+Y ENS V +SL
Sbjct: 922 QEICYDGDFLEVPKTWAFMSELVRYKSHVDNSNE--DNLQGAAYDGRSYVENSKVKDSLL 979
Query: 845 LMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTR 904
LMKFY LS VVSHLLSDR G ELDLPFEVT+E+L++IL PRSTFILGRSGTGKTTVLT
Sbjct: 980 LMKFYSLSFGVVSHLLSDRDGIELDLPFEVTEEELDIILYPRSTFILGRSGTGKTTVLTM 1039
Query: 905 KLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAI 964
KL+QKE+LH + YG + V+ Q+SE E +LRQLF+TVSPKLC+A+
Sbjct: 1040 KLYQKEKLHYLVTGS-YGTEDGVSSEAGQKSEISEIPAAENGAVLRQLFLTVSPKLCYAV 1098
Query: 965 KQHISQMKSS------------------------------------------AFGG--KF 980
+QH+S +KS+ A GG K
Sbjct: 1099 RQHVSHLKSTRLLFAQDINTDDHIKYSHFPFESFQTMFTFEFNVFYSIIYSYACGGDTKR 1158
Query: 981 VAESSLIDIDD-EAEFKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIR 1039
+ ++DD EA+F D+P+S A+I +SYPLVITF+KFLMMLD TL +SYF RF D R
Sbjct: 1159 TTAFDMENMDDLEAQFTDVPDSLANITTKSYPLVITFYKFLMMLDRTLCNSYFQRFCDAR 1218
Query: 1040 K-HYGQ 1044
+ YGQ
Sbjct: 1219 QLLYGQ 1224
>gi|356577345|ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781902 [Glycine max]
Length = 1636
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1044 (50%), Positives = 723/1044 (69%), Gaps = 56/1044 (5%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGK 62
E C CS S+ + ++ L S LN+SQ +A+ +CL + C+H + ++LIWGPPGTGK
Sbjct: 219 EECCGCSYPSDALRDDCTYQMLLSELNESQNKAISACLSGLNCNHNSAVKLIWGPPGTGK 278
Query: 63 TKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
T+T+ LL LL+MK+R LVC PTNVAIKE+A+RVV ++KE+ ++ D LF +G++LL
Sbjct: 279 TRTLGTLLYALLKMKYRVLVCAPTNVAIKEVASRVVDIMKEAHSKESGD-LFCSMGEVLL 337
Query: 123 LGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNE 182
G NERLK+ VE++YLD+RV++L +CF+P G+S SM+ FL+ CVS YH Y++N
Sbjct: 338 FGYNERLKIGEDVEDVYLDHRVQQLTECFSPYNGFSSSLKSMIGFLEYCVSDYHIYVEN- 396
Query: 183 SMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPK 242
MK +E ++ K FL F+R+ F IA PL++ I CT +
Sbjct: 397 -MK----------------REGSMA----KSFLVFLREGFHSIALPLKAFISILCTHVAM 435
Query: 243 CYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHS----VDEGLSKSIVGIKY 298
++ K N+ + L L+SF+ LL ++ L SE LE+L S+ + +S S G Y
Sbjct: 436 SHLLKHNYQNLLCLNEALESFQDLLLKNTLFSERLEKLFSYKKLPVAYQTISWSFDGDAY 495
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L+++R+ C L ++ S + L + ++ E FC + +SL STAS S+ LH
Sbjct: 496 QLYEKRTACLNALLAVEHSLQDFMLKKSNNSEIRE-----FCFQTSSLIFSTASGSHKLH 550
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
S+ M+PLN LVIDEAA LK+ ES IPL L GI HA+LFGDECQL +MV S VSNEA FGR
Sbjct: 551 SLTMKPLNILVIDEAAMLKDCESIIPLLLPGISHALLFGDECQLSSMVRSNVSNEAGFGR 610
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLF+RLS LG+ K+LL++Q+RMHP IS FPNSYFY NKI+D+S V + Y K++L GPM+
Sbjct: 611 SLFQRLSSLGFPKYLLNMQHRMHPQISSFPNSYFYFNKIQDASNVERIDYVKQYLPGPMF 670
Query: 479 GPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
GPYSFINVF G+E+F + S +NM EV+VVM IL NL+KAW++SK KLSIGIVSPY Q
Sbjct: 671 GPYSFINVFEGKEQFDDAGRSYKNMAEVAVVMTILKNLFKAWLNSKHKLSIGIVSPYVGQ 730
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
VVAIQEKLG Y + GF V V SIDGFQGGE+D+II+STVR+NN S+ F+S+ +R NV
Sbjct: 731 VVAIQEKLGQIYESHDGFNVDVKSIDGFQGGEKDVIILSTVRTNNRTSLEFISSPQRTNV 790
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
ALTRARHCLWILGN R L ++VW+A+V DA R+CFF+AD DK+LGKAIL KK ++
Sbjct: 791 ALTRARHCLWILGNERALASNENVWKAIVLDAKNRKCFFDADQDKELGKAILDAKKASNQ 850
Query: 657 LDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVD 716
LD+LL+ S LF+SQ WKV+FS+ FL+SF+++ S+ KK+VI+LL++LS+GWRPK+ +VD
Sbjct: 851 LDDLLDTNSVLFKSQLWKVHFSDKFLRSFKRIRSEKIKKNVINLLIRLSSGWRPKRFSVD 910
Query: 717 SVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVK 776
C +S ++KQFKVE FY+IC+IDIVK S+Y QVLK+W+ILPLED+P++ RLD ++
Sbjct: 911 LSCENSSQMLKQFKVESFYVICSIDIVKASRYIQVLKIWNILPLEDIPQLAKRLDKVFKG 970
Query: 777 YTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAEN 836
YT E+I+ C+ K +GN+E P +W ++N+ +FKN+ ND N G A + + EN
Sbjct: 971 YTNEYISRCRCKKKDGNIEFPLSWPLSANIQKFKNV-HNDANVGEK---NANEDGSDDEN 1026
Query: 837 SNV-SESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSG 895
S V ES LMK+ S+ ++L ++DLP+ VTDEQ ++IL P+STF+LGRSG
Sbjct: 1027 SGVEDESTLLMKY---CSISRDYMLYGLDSLQVDLPYNVTDEQRKIILFPKSTFVLGRSG 1083
Query: 896 TGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
TGKTTVL KL Q E+LH +A+EE YG NN L S++ + ETERPILRQLFVT
Sbjct: 1084 TGKTTVLITKLIQNEKLHHVAVEEAYGFNNYANLEASKDI-----VSETERPILRQLFVT 1138
Query: 956 VSPKLCFAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVIT 1015
+SP LC ++ H+S+++ S G +A S+ K+IP+SF +P+ YPLVIT
Sbjct: 1139 LSPGLCQKVQHHVSRLRRSFGDGSTLAAST---------DKNIPDSFNGVPSNLYPLVIT 1189
Query: 1016 FHKFLMMLDGTLGSSYFDRFHDIR 1039
F FL+MLDGTLG+SYF+R+++++
Sbjct: 1190 FRTFLLMLDGTLGNSYFERYYNLK 1213
>gi|358349482|ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
gi|355504700|gb|AES85903.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
Length = 1644
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/1048 (48%), Positives = 692/1048 (66%), Gaps = 63/1048 (6%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V +C+ C+ + +W++ LSS LN++Q A+ +CL + C H AT++L+WGPPGT
Sbjct: 234 VKGSCD-CTSLYDAMWDDCSYRRLSSDLNEAQNTAISNCLSGIHCSHNATVKLVWGPPGT 292
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKT+ +L IL++MK+R LVC PTNVAIKE+A+RV+ + +ES C GD+
Sbjct: 293 GKTKTLGTMLFILMKMKYRILVCAPTNVAIKEVASRVLHIARES---QC------SAGDM 343
Query: 121 LLLGNNERLKVDSG-VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
LL GNN+RL V S +E+I+LD RV++L C + TGW +C SM+ F +C S Y +I
Sbjct: 344 LLFGNNDRLDVGSEEIEDIFLDNRVRKLRKCLSSFTGWRNCLISMIHFFKSCASDYKMFI 403
Query: 180 DNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTR 239
+NE +K ++ D ++ FL+F+R+RF A L+ CI CT
Sbjct: 404 ENEILKLTK---------------PDNKSYKLTSFLDFLRERFLPRADQLKDCISMLCTH 448
Query: 240 IPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIV--GIK 297
+P C I + N+ + L + L+SF+ +LF++NL S+EL+ L S+ ++ ++ S+ G
Sbjct: 449 VPMCIILEHNYWKLVYLNAALESFQKMLFQENLSSDELKMLFSN-LEMPVNSSLYFKGTA 507
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
+ K+R+EC L ++ S + L L + + + D FC K +S+ TASSS+ L
Sbjct: 508 EHVFKKRNECLSALETVKDSLDRLELKRFTDDESVSD----FCFKNSSIIFCTASSSFRL 563
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
H+++M+P+N LVIDEAAQLKE ES +PL L I HA+L GDECQLP+MV S V + A FG
Sbjct: 564 HTISMKPINLLVIDEAAQLKECESIVPLLLPRISHAILVGDECQLPSMVRSNVCSVAGFG 623
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLFERLS LG K+LL+ Q+RMHP IS FPNSYFY NKI DS V +R+Y K++L GPM
Sbjct: 624 RSLFERLSLLGSPKNLLNTQHRMHPEISLFPNSYFYSNKINDSPNV-QRNYGKKYLPGPM 682
Query: 478 YGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+G YSFINV GGREEF + S +N+ EV+VVM IL NL+K W+ KEKLSIGIVSPY+
Sbjct: 683 FGTYSFINVAGGREEFDDDGRSYKNIAEVAVVMTILKNLHKVWLAKKEKLSIGIVSPYAG 742
Query: 536 QVVAIQEKLGS-KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
QV+ IQEKL Y + GF V V SIDGFQGGE+D+II+STVR+N S+ F+S+ +R
Sbjct: 743 QVLKIQEKLAMMNYSSHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRT 802
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKEL 654
NVALTRAR+CLWILGN R L +VW ALV D+ R FF+ D + ++ KA+L KEL
Sbjct: 803 NVALTRARYCLWILGNERALVNNNNVWRALVIDSKNRGLFFSTDQNPEMAKAVLDSMKEL 862
Query: 655 DELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRN 714
D+ +LL+ S +FR+ WKV F++ F KSF+K+ +K SVI++L +L+NGWRP+ R
Sbjct: 863 DQSLDLLDTNSAIFRNTMWKVYFTDQFRKSFQKVRQPQSKISVINVLERLANGWRPRGRT 922
Query: 715 VDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQ-YFQVLKVWDILPLEDVPKVVARLDNI 773
V+ VC +S I+KQFKVE YIIC+I+IVK+ Q + QVLK+WDI+ LED+PK+ LD+
Sbjct: 923 VELVCENSSKILKQFKVERRYIICSIEIVKDFQCHVQVLKMWDIVRLEDIPKLAKSLDSE 982
Query: 774 YVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNY 833
+ KYT E+I CKE +G +E P +W T+N+ +FK++ N N SDL + D++N
Sbjct: 983 FRKYTDEYILCCKENGFDGKIECPLSWPRTANIRKFKSVGAN-NTEESDLVDSE-DAKNA 1040
Query: 834 AENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGR 893
AENS + ES LMKF LS H+ + R E+DLPFE+T+EQ +++ PRSTF+LGR
Sbjct: 1041 AENSMIEESTLLMKFCALSP---DHMRTGRDDIEVDLPFELTEEQRNIVIFPRSTFVLGR 1097
Query: 894 SGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLF 953
SGTGKTT L KL Q E+ H +A+E YG N + SE+ E E +RPIL QLF
Sbjct: 1098 SGTGKTTALKTKLIQNEKSHHVAVERVYGPNYTA-------SESNEIDVELKRPILCQLF 1150
Query: 954 VTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLV 1013
VT+SP LC IK H+S K S + E+ ID +DI +SF+D+P YPLV
Sbjct: 1151 VTLSPGLCQEIKHHVSCFKRS------IGENVSID-------EDINDSFSDVPTNLYPLV 1197
Query: 1014 ITFHKFLMMLDGTLGSSYFDRFHDIRKH 1041
ITFHKFL+MLD TLG+SY RF D++
Sbjct: 1198 ITFHKFLLMLDLTLGNSYIKRFSDLKNQ 1225
>gi|449445385|ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214394 [Cucumis sativus]
Length = 2763
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1047 (48%), Positives = 680/1047 (64%), Gaps = 45/1047 (4%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
DE C CS+ + + E SLSS LNDSQ AVL C+ + C+HK +++LIWGPPGTG
Sbjct: 220 DEICSKCSLYNNVICAEKLRTSLSSVLNDSQKAAVLCCVCKALCEHKPSVELIWGPPGTG 279
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKT+S LL +L+MK R L C PTNVAI ELA+RVVKL++ES + LGD+L
Sbjct: 280 KTKTISFLLWAILEMKQRVLACAPTNVAITELASRVVKLLRESSREG---GVLCSLGDVL 336
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID- 180
L GN +RLKV S +EEIY DYRV RL +CF +GW S+++ L++ S YH +++
Sbjct: 337 LFGNKDRLKVGSELEEIYSDYRVDRLLECFGQ-SGWKSHITSLINLLESTNSEYHMFLES 395
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
N +M + + GD + V FL F+R++F A LR C+ T I
Sbjct: 396 NVNMSRRDKKTGD-------------NAVAATSFLRFIREKFNTTAVALRGCLQTLITHI 442
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLL 300
PK +I + NF + L++L+DSF LL ++N+ S ++E L S S+D + ++
Sbjct: 443 PKHFILEHNFQNIVILLNLVDSFGMLLSQENITSTQMEVLFS-SLDVFMEFPNSSVEATF 501
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
R++C +LR LQ+S ++L LP+ K + K FC +RASL L TASSS+ L+ +
Sbjct: 502 LHLRNQCLSILRFLQASLDQLQLPTTANKKSV----KEFCFQRASLILCTASSSFQLNFM 557
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
M+P+ LVIDEAAQLKE ES +PLQL GIKHA+L GDECQLPA+V S+V + A +GRSL
Sbjct: 558 KMDPVKLLVIDEAAQLKECESMVPLQLPGIKHAILIGDECQLPAIVSSQVCDAAGYGRSL 617
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
FERLS LG+SKHLL+ QYRMHPSIS FPNS FY N+I D+ V Y+KR++ PM+GP
Sbjct: 618 FERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQITDAPLVMDEVYKKRYIPSPMFGP 677
Query: 481 YSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
Y+FINV G+EE + S +N +EV+VV+KI+ LYKAW K +LSIG++S Y+AQV
Sbjct: 678 YTFINVSVGKEEGDDDGRSKKNALEVAVVIKIIEKLYKAWRSVKTRLSIGVISFYAAQVT 737
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AIQ +LG KY GF VKV S+DGFQGGEED+II+STVRSN IGF+SNS+R+NVAL
Sbjct: 738 AIQGRLGQKYEKRDGFTVKVKSVDGFQGGEEDVIILSTVRSNRRKKIGFISNSQRINVAL 797
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRARHCLWI+G+A TL S WEA+V DA RQC+FNA++DKDL AI+ VKK L ELD
Sbjct: 798 TRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAEEDKDLADAIIEVKKVLLELD 857
Query: 659 ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSV 718
+LLN +S LF+ +WKV S++F SF+K+ S KKS+I LLL+LS GWRP+ +N +
Sbjct: 858 DLLNKDSVLFKMVQWKVLLSDSFRASFQKVVSVNQKKSIIVLLLRLSCGWRPETKNFPNP 917
Query: 719 CGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYT 778
S IIK KVEG YII ++DI K S+Y QVLK+WDI PL DV VV L NI+ YT
Sbjct: 918 KCSD--IIKCVKVEGLYIIYSLDIEKGSKYKQVLKIWDIKPLTDVKGVVDCLSNIHELYT 975
Query: 779 AEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSN 838
EF+N C S +G+LE+P TW+A+ ++V +K D+ + + D + +N
Sbjct: 976 DEFLNLCMASSHKGDLELPITWSASHDIVVYK-----DHIKAELDAILSQDDSDDTKNVT 1030
Query: 839 VSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGK 898
+ ++L MKF LS LLS +ELDLP +V DEQL++IL P S F++GR G+ K
Sbjct: 1031 LKKNLLQMKFQSLSYQKAKLLLSSHDSKELDLPCQVEDEQLDIILFPTSAFVMGRPGSEK 1090
Query: 899 TTVLTRKLFQKEE---LHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
T LT KLF +E+ +H E N V +E E + +R +LRQLF+T
Sbjct: 1091 TAALTIKLFMREKQQLIHPKGCNEVMRQNAEVCYI----NEGGEECKKIDRTVLRQLFIT 1146
Query: 956 VSPKLCFAIKQHISQMKSSAFGGKFVAESS------LIDIDDEAEFKDIPNSFADIPAES 1009
V+ K C A+K+H+ + + GG + E+ ++D+DD + ++PNSF IP S
Sbjct: 1147 VTLKQCLAVKEHLLYLSRISDGGNILEENQSFNRVDVLDMDDAQDLLNVPNSFDGIPFNS 1206
Query: 1010 YPLVITFHKFLMMLDGTLGSSYFDRFH 1036
YPLV+TF KFLMMLD T+G SYF RF
Sbjct: 1207 YPLVMTFRKFLMMLDRTVGDSYFFRFQ 1233
>gi|449445369|ref|XP_004140445.1| PREDICTED: uncharacterized protein LOC101212224 [Cucumis sativus]
Length = 1855
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/1047 (47%), Positives = 672/1047 (64%), Gaps = 57/1047 (5%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
DE C+ CS+ + V E G SLSS LNDSQ+ AVL + + CDH +++LIWGPPGTG
Sbjct: 365 DEICDRCSLYNNAVCAEKLGTSLSSVLNDSQSAAVLCSICKTLCDHMPSVELIWGPPGTG 424
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKT+S LL +L+M R L C PTNVAI ELAARVV+L++ES + + LGD+L
Sbjct: 425 KTKTISFLLCKILEMNQRVLACAPTNVAITELAARVVQLLRESSKAK---GVLCSLGDML 481
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN 181
L GN +RLKV S +EEIYLDYRV RL +CF GW + ++ ++ S Y +
Sbjct: 482 LFGNKDRLKVGSELEEIYLDYRVDRLVECFGQ-AGWKYHTTCFINLFESSNSEYLILLK- 539
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKP-FLEFVRDRFKCIAAPLRSCIFNFCTRI 240
S+V+ P FL F+R++FK ++ LR C+ T I
Sbjct: 540 -------------------------SNVQTSPSFLGFIREKFKSTSSALRGCLKTLITHI 574
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHS---VDEGLSKSIVGIK 297
PK +I + N + L++L+DSF LL +DN+ SE+++ LLS +D S I
Sbjct: 575 PKQFILEHNIQNIEILLNLIDSFGMLLSQDNVTSEQMKMLLSSPEVFIDFPNSSVAETIL 634
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
Y RS+C LR LQ+S N+L PS ++ + K FC +RASL L TASSS+ L
Sbjct: 635 YF----RSQCLSSLRTLQASLNQLQFPSTANRESV----KKFCFQRASLILCTASSSFQL 686
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+ + M+P+N LVIDEAAQLKE ES +PLQL GIKHA+L GDECQLPA+V S+V + +G
Sbjct: 687 NFMKMDPVNLLVIDEAAQLKECESIVPLQLPGIKHAILIGDECQLPAIVSSQVCDAVGYG 746
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLFERLS LG+SKHLL+ QYRMHPSIS FPNS FY N+I D+ V ++K ++ PM
Sbjct: 747 RSLFERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQILDAPLVMAEVHKKCYIPSPM 806
Query: 478 YGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+GPYSFINV G+EE + +S +N VEV+VV+KI+ LYKAW +K +L++G++S Y+A
Sbjct: 807 FGPYSFINVSVGKEEGDDDGYSKKNTVEVAVVIKIIEKLYKAWRGAKTRLNVGVISFYAA 866
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QV IQ +L KY S F VKV S+DGFQGGEED+II++TVRSN +IGF+S+S+R+N
Sbjct: 867 QVSEIQSRLAHKYEKSHNFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRIN 926
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELD 655
VALTRARHCLWI+G+A TL S WEA+V DA RQC+FNA +DKD AI+ VKK L
Sbjct: 927 VALTRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAAEDKDFADAIIEVKKVLL 986
Query: 656 ELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNV 715
ELD+LLN +S LF +WKV S++F SF+ + S KK +I LLL+LS GWRP V
Sbjct: 987 ELDDLLNKDSVLFTMAQWKVLLSDSFRASFQNVVSINQKKLIIVLLLRLSCGWRPGTDYV 1046
Query: 716 DSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYV 775
++ S +IIK FK EG +II ++ I K+ +Y Q+LK+WDI PL DV +V L +I+
Sbjct: 1047 PNLKCS--NIIKCFKAEGLFIIYSLYIEKDLKYKQILKIWDIKPLTDVKVLVECLSDIHE 1104
Query: 776 KYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAE 835
YT +F+N CK KS +G+LE+P TW+A+ ++V +K+ + N+ L G + D+++
Sbjct: 1105 LYTDDFLNLCKAKSHKGDLELPITWSASPDIVVYKDYMKAELNAILSLQGDSDDTQDIT- 1163
Query: 836 NSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSG 895
+ + L M+F LS HLLS R +ELDLP +V D +LE+IL P + FI+GR G
Sbjct: 1164 ---LKKKLLQMRFQSLSYQKAKHLLSGRDSKELDLPCQVEDVELEIILVPTNAFIMGRPG 1220
Query: 896 TGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
+GKT +T KLF +E+ + V C + EE +TER +LRQLF+T
Sbjct: 1221 SGKTAAMTVKLFMREQQQYIHPTGCSLVTRENAEVCYRNEGGEE-CKKTERTVLRQLFIT 1279
Query: 956 VSPKLCFAIKQHISQMKSSAFGGKFVAESS------LIDIDDEAEFKDIPNSFADIPAES 1009
V+ K C +K+ ++ +K + GG E+ ++D++D + D+PNSF IPA S
Sbjct: 1280 VTLKQCLYVKERLAYLKRISNGGNVFKETQNLCKADVLDMNDVQDLLDVPNSFDGIPANS 1339
Query: 1010 YPLVITFHKFLMMLDGTLGSSYFDRFH 1036
+PLVITF KFL+MLD T+G SYF RF
Sbjct: 1340 FPLVITFRKFLIMLDRTVGDSYFIRFQ 1366
>gi|449487923|ref|XP_004157868.1| PREDICTED: uncharacterized protein LOC101231306 [Cucumis sativus]
Length = 1768
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/1047 (46%), Positives = 661/1047 (63%), Gaps = 84/1047 (8%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
DE C+ CS+ + V E G SLSS LNDSQ+ AVL + + CDH +++LIWGPPGTG
Sbjct: 340 DEICDRCSLYNNAVCAEKLGTSLSSVLNDSQSAAVLCSICKTLCDHMPSVELIWGPPGTG 399
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKT+S LL +L+M R L C PTNVAI ELAARVV+L++ES + + LGD+L
Sbjct: 400 KTKTISFLLCKILEMNQRVLACAPTNVAITELAARVVQLLRESSKAK---GVLCSLGDML 456
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN 181
L GN +RLKV S +EEIYLDYRV RL +CF GW + ++ ++ S Y +
Sbjct: 457 LFGNKDRLKVGSELEEIYLDYRVDRLVECFGQ-AGWKYHTTCFINLFESSNSEYLILLK- 514
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKP-FLEFVRDRFKCIAAPLRSCIFNFCTRI 240
S+V+ P FL F+R++FK ++ LR C+ T I
Sbjct: 515 -------------------------SNVQTSPSFLGFIREKFKSTSSALRGCLKTLITHI 549
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHS---VDEGLSKSIVGIK 297
PK +I + N + L++L+DSF LL +DN+ SE+++ LLS +D S I
Sbjct: 550 PKQFILEHNIQNIEILLNLIDSFGMLLSQDNVTSEQMKMLLSSPKVFIDFPNSSVAETIL 609
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
Y RS+C LR LQ+S N+L PS ++ + K FC +RASL L TASSS+ L
Sbjct: 610 YF----RSQCLSSLRTLQASLNQLQFPSTANRESV----KKFCFQRASLILCTASSSFQL 661
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+ + M+P+N LVIDEAAQLKE ES +PLQL GIKHA+L GDECQLPA+V S+V + +G
Sbjct: 662 NFMKMDPVNLLVIDEAAQLKECESIVPLQLPGIKHAILIGDECQLPAIVSSQVCDAVGYG 721
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLFERLS LG+SKHLL+ QYRMHPSISCFPNS FY N+I D+ V ++K ++ PM
Sbjct: 722 RSLFERLSLLGHSKHLLNTQYRMHPSISCFPNSKFYSNQILDAPLVMAEVHKKCYIPSPM 781
Query: 478 YGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+GPYSFINV G+EE + +S +N VEV+VV+KI+ LYKAW +K +L++G++S Y+A
Sbjct: 782 FGPYSFINVSVGKEEGDDDGYSKKNTVEVAVVIKIIEKLYKAWRGAKTRLNVGVISFYAA 841
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QV IQ +L KY S F VKV S+DGFQGGEED+II++TVRSN +IGF+S+S+R+N
Sbjct: 842 QVSEIQSRLAHKYEKSHNFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRIN 901
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELD 655
VALTRARHCLWI+G+A TL S WEA+V DA RQC+FNA +DKD AI+ VKK L
Sbjct: 902 VALTRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAAEDKDFADAIIEVKKVLL 961
Query: 656 ELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNV 715
ELD+LLN +S LF +WKV S++F SF+ + S KK ++ LLL+LS GWRP V
Sbjct: 962 ELDDLLNKDSVLFTMAQWKVLLSDSFRASFQNVVSINQKKLILVLLLRLSCGWRPGTDYV 1021
Query: 716 DSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYV 775
++ S +IIK FK EG +II ++ I K+ +Y Q+LK+WDI PL DV +V L +I+
Sbjct: 1022 PNLKCS--NIIKCFKAEGLFIIYSLYIEKDLKYKQILKIWDIKPLTDVKVLVECLSDIHE 1079
Query: 776 KYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAE 835
YT +F+N CK KS +G+LE+P TW+A+ ++V +K+ + N+
Sbjct: 1080 LYTDDFLNLCKAKSHKGDLELPITWSASPDIVVYKDYMKAELNA---------------- 1123
Query: 836 NSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSG 895
+ S+ HLLS R +ELDLP +V D +LE+IL P + FI+GR G
Sbjct: 1124 ---------------ILSLQAKHLLSGRDSKELDLPCQVEDVELEIILVPTNAFIMGRPG 1168
Query: 896 TGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
+GKT +T KLF +E+ + V C + EE +TER +LRQLF+T
Sbjct: 1169 SGKTAAMTVKLFMREQQQYIHPTGCSLVTRENAEVCYRNEGGEE-CKKTERTVLRQLFIT 1227
Query: 956 VSPKLCFAIKQHISQMKSSAFGGKFVAESS------LIDIDDEAEFKDIPNSFADIPAES 1009
V+ K C +K+ ++ +K + GG E+ ++D++D + D+PNSF IPA S
Sbjct: 1228 VTLKQCLDVKERLAYLKRISNGGNVFKETQNLCKADVLDMNDVQDLLDVPNSFDGIPANS 1287
Query: 1010 YPLVITFHKFLMMLDGTLGSSYFDRFH 1036
+PLVITF KFL+MLD T+G SYF RF
Sbjct: 1288 FPLVITFRKFLIMLDRTVGDSYFIRFQ 1314
>gi|147802044|emb|CAN66065.1| hypothetical protein VITISV_025023 [Vitis vinifera]
Length = 2275
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/990 (48%), Positives = 629/990 (63%), Gaps = 83/990 (8%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E+CELC S GV E FG LSS LN SQ AVL+ LR++ C+HK++++LI GPPGT
Sbjct: 131 VKESCELCPESSSGVRTENFGTILSSKLNKSQMAAVLASLRKIHCNHKSSVELICGPPGT 190
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKT+T+S LL LL RTL C PT VA+KE+A+RV+K +KES E D +DA LGD
Sbjct: 191 GKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMKHLKESFETDPQKDASICSLGD 250
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
+L G+ + V S ++EIYLD+RV+RLA CF PL GW H F SM+ FL+ VS
Sbjct: 251 LLFFGDYDSTAVGSEMKEIYLDHRVERLAKCFEPLNGWRHSFNSMIVFLEGGVSEDRVSE 310
Query: 180 DNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTR 239
D S + I+G S + K +L+ R++FK + LR + T
Sbjct: 311 DELSKMEEGSIDG--------------SKGKRKTYLQLAREQFKSTSLNLREVVITLSTH 356
Query: 240 IPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL 299
IPK +I + NF M +L+ L SFE LL +DN+VSEELE L + + S V
Sbjct: 357 IPKSFIMEHNFQAMLSLLGFLRSFEFLLHQDNMVSEELENLFAGKKNVKHSSKSVADSST 416
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L + RSEC +L+ L++S +EL P KDLL D FC + AS STAS S+ LH
Sbjct: 417 LMEIRSECLHILKNLRNSLDELQFPKNNSKDLLID----FCFQTASSIFSTASDSHKLHL 472
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
V M+PLN LVIDEAAQL+E ESTIPLQL GIK A+L GD+ QLP+ V S + + A FGRS
Sbjct: 473 VDMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQLPSRVTSNICDRAGFGRS 532
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
L+ERLS L ++KH L++QYRMHPSIS FP S FY N+I D+ V+ ++YEK++L P++
Sbjct: 533 LYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFR 592
Query: 480 PYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDS-KEKLSIGIVSPYSAQ 536
PY FIN+ GREE E HS +NMVEV+V+MKI+ NLY+ W KE+L IG++S Y+AQ
Sbjct: 593 PYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQDWRSGIKEELRIGVLSXYTAQ 652
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V+ IQE+ KY N+ F+VKV +IDGFQGGEED+I+ISTVR+NN GS+G +++ K NV
Sbjct: 653 VLEIQERXXQKYENNDRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNV 712
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
ALTRARH LWILG+ RTL ++VW+ +VHDA R C NAD+D DL I VK ELDE
Sbjct: 713 ALTRARHGLWILGSERTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTIFKVKAELDE 772
Query: 657 LDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVD 716
LD+LLN +S LF S RWKV +
Sbjct: 773 LDDLLNRDSSLFNSXRWKVGY--------------------------------------- 793
Query: 717 SVCGSSLHIIKQFKVEGFYIICTIDIVKESQYF-QVLKVWDILPLEDVPKVVARLDNIYV 775
L+I+ C+ D+ KE Y+ QVLKVWDIL LED+PK+V LD+++
Sbjct: 794 ------LYIV-----------CSNDLEKECGYYTQVLKVWDILALEDIPKLVKHLDSLFE 836
Query: 776 KYTAEFINHCKEKSIEGN--LEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNY 833
YT +++ CK+KS EG+ LE+P +WT + ++V++K+L++N S++SG A R
Sbjct: 837 MYTDDYLTRCKKKSWEGHRELEIPMSWTTSYDIVQYKSLSNNATGRISNVSGLA--RRGG 894
Query: 834 AENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGR 893
ENS VSES +MKFY ++ +V H +S GRELDLPFE+TD++ E I RS+FILGR
Sbjct: 895 FENSIVSESFLIMKFYSVTFNMVRHFISXHDGRELDLPFELTDQERETIFFNRSSFILGR 954
Query: 894 SGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLF 953
SGTGKTTVL+ KLFQKE+L +A E Y V + H SQ +E E G+ + L QLF
Sbjct: 955 SGTGKTTVLSMKLFQKEQLFHIASEGLYEVEGHSSTHASQRNEIGECTGDAKGACLHQLF 1014
Query: 954 VTVSPKLCFAIKQHISQMKSSAFGGKFVAE 983
VTVSP+LC AI++ +S +S A GGKF+ E
Sbjct: 1015 VTVSPRLCNAIRRQLSHFQSFASGGKFLVE 1044
>gi|449498392|ref|XP_004160526.1| PREDICTED: uncharacterized protein LOC101225988 [Cucumis sativus]
Length = 1064
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/963 (48%), Positives = 628/963 (65%), Gaps = 39/963 (4%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
DE C CS+ + + E SLSS LNDSQ AVL C+ + C+HK +++LIWGPPGTG
Sbjct: 135 DEICSKCSLYNNVICAEKLRTSLSSVLNDSQKAAVLCCVCKALCEHKPSVELIWGPPGTG 194
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKT+S LL +L+MK R L C PTNVAI ELA+RVVKL++ES + LGD+L
Sbjct: 195 KTKTISFLLWAILEMKQRVLACAPTNVAITELASRVVKLLRESSREG---GVLCSLGDVL 251
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID- 180
L GN +RLKV S +EEIY DYRV RL +CF +GW S+++ L++ S YH +++
Sbjct: 252 LFGNKDRLKVGSELEEIYSDYRVDRLLECFGQ-SGWKSHITSLINLLESTNSEYHMFLES 310
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
N +M + + GD + V FL F+R++F A LR C+ T I
Sbjct: 311 NVNMSRRDKKTGD-------------NAVAATSFLRFIREKFNTTAVALRGCLQTLITHI 357
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLL 300
PK +I + NF + L++L+DSF LL ++N+ S ++E L S S+D + ++
Sbjct: 358 PKHFILEHNFQNIVILLNLVDSFGMLLSQENITSTQMEVLFS-SLDVFMEFPNSSVEATF 416
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
R++C +LR LQ+S ++L LP+ K + K FC +RASL L TASSS+ L+ +
Sbjct: 417 LHLRNQCLSILRFLQASLDQLQLPTTANKKSV----KEFCFQRASLILCTASSSFQLNFM 472
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
M+P+ LVIDEAAQLKE ES +PLQL GIKHA+L GDECQLPA+V S+V + A +GRSL
Sbjct: 473 KMDPVKLLVIDEAAQLKECESMVPLQLPGIKHAILIGDECQLPAIVSSQVCDAAGYGRSL 532
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
FERLS LG+SKHLL+ QYRMHPSIS FPNS FY N+I D+ V Y+KR++ PM+GP
Sbjct: 533 FERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQITDAPLVMDEVYKKRYIPSPMFGP 592
Query: 481 YSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
Y+FINV G+EE + S +N +EV+VV+KI+ LYKAW K +LSIG++S Y+AQV
Sbjct: 593 YTFINVSVGKEEGDDDGRSKKNALEVAVVIKIIEKLYKAWRSVKTRLSIGVISFYAAQVT 652
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AIQ +LG KY GF VKV S+DGFQGGEED+II+STVRSN IGF+SNS+R+NVAL
Sbjct: 653 AIQGRLGQKYEKRDGFTVKVKSVDGFQGGEEDVIILSTVRSNRRKKIGFISNSQRINVAL 712
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRARHCLWI+G+A TL S WEA+V DA RQC+FNA++DKDL AI+ VKK L ELD
Sbjct: 713 TRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAEEDKDLADAIIEVKKVLLELD 772
Query: 659 ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSV 718
+LLN +S LF+ +WKV S++F SF+K+ S KKS+I LLL+LS GWRP+ +N +
Sbjct: 773 DLLNKDSVLFKMVQWKVLLSDSFRASFQKVVSVNQKKSIIVLLLRLSCGWRPETKNFPNP 832
Query: 719 CGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYT 778
S IIK KVEG YII ++DI K S+Y QVLK+WDI PL DV VV L NI+ YT
Sbjct: 833 KCSD--IIKCVKVEGLYIIYSLDIEKGSKYKQVLKIWDIKPLTDVKGVVDCLSNIHELYT 890
Query: 779 AEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSN 838
EF+N C S +G+LE+P TW+A+ ++V +K D+ + + D + +N
Sbjct: 891 DEFLNLCMASSHKGDLELPITWSASHDIVVYK-----DHIKAELDAILSQDDSDDTKNVT 945
Query: 839 VSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGK 898
+ ++L MKF LS LLS +ELDLP +V DEQL++IL P S F++GR G+ K
Sbjct: 946 LKKNLLQMKFQSLSYQKAKLLLSSHDSKELDLPCQVEDEQLDIILFPTSAFVMGRPGSEK 1005
Query: 899 TTVLTRKLFQKEE---LHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVT 955
T LT KLF +E+ +H E N V +E E + +R +LRQLF+T
Sbjct: 1006 TAALTIKLFMREKQQLIHPKGCNEVMRQNAEVCYI----NEGGEECKKIDRTVLRQLFIT 1061
Query: 956 VSP 958
V+P
Sbjct: 1062 VTP 1064
>gi|224099651|ref|XP_002311566.1| predicted protein [Populus trichocarpa]
gi|222851386|gb|EEE88933.1| predicted protein [Populus trichocarpa]
Length = 1950
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/640 (63%), Positives = 504/640 (78%), Gaps = 13/640 (2%)
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
+V ++A FGRSLFERLS LG+SKHLL +QYRMHPSISCFPNS FY ++I D+ V+ RSY
Sbjct: 463 RVCDKAGFGRSLFERLSSLGHSKHLLDMQYRMHPSISCFPNSKFYFSQILDAPNVKARSY 522
Query: 469 EKRFLHGPMYGPYSFINVFGGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
EK +L GPM+GPY+FINVFGGREE + HS +NMVEV++V+K+L +LYKAW S +K+
Sbjct: 523 EKHYLPGPMFGPYTFINVFGGREELDDVGHSRKNMVEVAIVLKLLRSLYKAW--SGQKVR 580
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
+G++SPY+AQV AIQEKLG KY GF+VKV SIDGFQGGEED++IISTVRSN GG+IG
Sbjct: 581 VGVISPYTAQVGAIQEKLGKKYETIDGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIG 640
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKA 646
F+S+ +R+NVALTRARHCLWILGN RTL+ +S+WE LVHDA R CFF+AD+DKDL KA
Sbjct: 641 FMSDPRRINVALTRARHCLWILGNERTLSNSESIWEKLVHDAKERSCFFHADEDKDLAKA 700
Query: 647 ILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSN 706
IL VKKE D+LD+L+ +S LFRS RWKV FSE F KSF KL S K V++LLLKLS+
Sbjct: 701 ILEVKKEFDQLDDLIKGDSALFRSARWKVLFSEYFKKSFGKLASVRKKTPVLNLLLKLSS 760
Query: 707 GWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKV 766
GWRPKKR+VD +CGSS I+KQFKVEG Y+IC+IDIVKE Y QVLKVWD+L LED+P +
Sbjct: 761 GWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDIVKEICYTQVLKVWDLLALEDIPIL 820
Query: 767 VARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGA 826
RL+ I+ YT +FI+HC EK +EG+LEVPKTW + ++ R+K+ ++N+ S S+ SG
Sbjct: 821 AKRLEGIFETYTDDFISHCNEKCLEGDLEVPKTWRTSFDIPRYKSCSNNEIRSNSN-SGP 879
Query: 827 AFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPR 886
D Y ENS VS+SL LMKFY LS V SHLLSDR GREL+LPFEVTDE+LE+I+ R
Sbjct: 880 --DGPYYVENSKVSDSLLLMKFYPLSPGVASHLLSDRDGRELELPFEVTDEELEIIIFQR 937
Query: 887 STFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAE---EGLGE 943
STFILGRSGTGKTTVLT KLF+KEEL+ A + + + + + + + +G+G+
Sbjct: 938 STFILGRSGTGKTTVLTMKLFKKEELYYTATQGYLNTSKDSSRRNNVADDIKSVGDGVGD 997
Query: 944 TERPILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLI---DIDDEAEFKDIPN 1000
+ +LRQLFVTVSPKLC+AIK H+ Q+KS A GGK+ AE S + DIDD A+FK+IPN
Sbjct: 998 AKETVLRQLFVTVSPKLCYAIKHHVIQLKSFASGGKYSAEGSSVDMEDIDDAAQFKEIPN 1057
Query: 1001 SFADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIRK 1040
SF DIP +SYPLVITF KFLMMLDGT+G+SYF+RF D+R+
Sbjct: 1058 SFLDIPPKSYPLVITFFKFLMMLDGTVGNSYFERFSDMRQ 1097
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/316 (49%), Positives = 214/316 (67%), Gaps = 3/316 (0%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V+E C SM+ +++E +LSS LN+SQ++AVL+CL + + +HK+ ++LIWGPPGT
Sbjct: 150 VEENCNQYSMRERAIYDENV-VNLSSKLNESQSKAVLACLLKKQSNHKSAVELIWGPPGT 208
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKTKTVSMLL LL+MK RTL C PTNV+I E+A+RV KLV ES E D D+LF +GD
Sbjct: 209 GKTKTVSMLLFSLLKMKCRTLTCGPTNVSITEVASRVFKLVTESHEADSGTDSLFHSVGD 268
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
ILL GN +RLKVDS +E+YLDYRVKRL +CFAPLTGW +CF S +DF ++CVS Y ++
Sbjct: 269 ILLFGNKDRLKVDSETQEVYLDYRVKRLIECFAPLTGWRNCFNSTIDFFEDCVSQYAIFV 328
Query: 180 DNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTR 239
+NE +K E + + K + C +A E K FLEF+RDRF+ A PL+ C+ CT
Sbjct: 329 ENELIKMQEHDDENEEKRESCSYQAVALKGEPKTFLEFMRDRFRSTALPLKRCLTLLCTH 388
Query: 240 IPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSH-SVDEGLSKSIVGIKY 298
IP+ I K N + +L LL+SFE+ LF ++S+EL E+ SH +DE + I
Sbjct: 389 IPETCILKHNIQNIVSLFGLLNSFESWLFHAAVISDELHEVFSHPGLDEDSFQGFNDILL 448
Query: 299 LLHKRRSECHFVLRKL 314
L +RSEC +L+++
Sbjct: 449 RLRLKRSECLTMLKRV 464
>gi|414585634|tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
Length = 2606
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1041 (41%), Positives = 612/1041 (58%), Gaps = 75/1041 (7%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
++ C +C+ + + + + P ++ LN SQ A+ S + +RC H +LIWGPPGTG
Sbjct: 209 EDVCSVCAKKDDCLMSSAELPPVN--LNQSQLDAIESIISAVRCRHLNLTKLIWGPPGTG 266
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTVS LL L +K RTL CTPTNVA+ + R ++ +KE ++ L LGD+L
Sbjct: 267 KTKTVSALLWALACLKCRTLTCTPTNVAVVGVCTRFLQNLKEFSKQIDICGLPLSLGDVL 326
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN 181
LLGN + + + ++E++LDYRV L +CF+ L+GW H SM+ F + C S Y
Sbjct: 327 LLGNRDNMDISEEIQEVFLDYRVDELTECFSLLSGWRHIIVSMISFFEECGSRY------ 380
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIP 241
D++ E + G ++ FL+F++ +F A ++ C+ +P
Sbjct: 381 -----------DMLLECDGGSDSVC-------FLDFLKKQFDVAAKAVKKCMMTLWVHLP 422
Query: 242 KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLS-HSVDEGLSKSIVGIKYLL 300
K +N ++ ++ LL+ L + +L E + S + + + I I+ L
Sbjct: 423 KKCFSHENVSNISMVLRLLEKINAFLCDGDLTDESAKRGFDFRSTENSIYEPISYIEKEL 482
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
RS C +L+ LQSS LNLP ASSSY LH+
Sbjct: 483 GDARSLCLKLLKDLQSS---LNLP-------------------------VASSSYRLHNA 514
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
+ PL+ L++DEAAQ+KE E IPL+L +KH VL GD+CQL + V EA FG SL
Sbjct: 515 EIAPLDMLIVDEAAQVKECELVIPLRLCWLKHVVLVGDDCQLRPL----VCKEAGFGISL 570
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
FERL L + KHLL+IQYRM P IS FPN+ FY+ KI D V SY K G ++G
Sbjct: 571 FERLVILNFEKHLLNIQYRMSPCISLFPNAKFYDKKILDGPNVHS-SYNKD-CTGLLFGS 628
Query: 481 YSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
Y+FIN+ GRE E +S +N+VEV+VVM ++ ++K+W + +SIG+VSPYS+QV
Sbjct: 629 YAFINITDGREQKEGAGNSWQNLVEVAVVMHLIRTIFKSWRKRDQGISIGVVSPYSSQVA 688
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AI+++LG KY S F V+V SIDGFQG E+D+II+STVRSN G++GFL++ +R NVAL
Sbjct: 689 AIKDRLGKKYDTSDNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVAL 748
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRARHCLWILGNA TL + +VW LV DA R+C NA D +L K IL VK ELDELD
Sbjct: 749 TRARHCLWILGNANTLYKSGTVWTDLVSDAQRRKCISNATTDPELCKLILHVKNELDELD 808
Query: 659 ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSV 718
+LL S +F + RWKV S+NF +SF KL S KK V+ L+KL GWR +N+D
Sbjct: 809 DLLCSSSAVFSNTRWKVVLSDNFRRSFMKLKSPLLKKEVLQKLVKLGGGWRIPIKNLDVT 868
Query: 719 CGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYT 778
+ + K +++ Y++ +ID+ K +YFQ+++VWD+L + V + V L+N++ YT
Sbjct: 869 --DAFQLAKAYRIRDLYLVWSIDLEKNERYFQMIRVWDLLSQQHVARTVQHLENLFSMYT 926
Query: 779 AEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSN 838
E+++HC+ EG LE P W A ++VR+K D+ D D EN+
Sbjct: 927 DEYLDHCRSVQTEGKLEFPIVWDAEHDIVRYKKDCKVDDQVDHD----HLDFSCALENTK 982
Query: 839 VSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGK 898
VSES LMKFY LSS V HLL+ G E+++PFE+TDE+ +I P ++FILGRSGTGK
Sbjct: 983 VSESFLLMKFYSLSSGVAHHLLTATDGTEIEIPFELTDEEEAIIRFPLTSFILGRSGTGK 1042
Query: 899 TTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSP 958
TTVLT KL+Q E+ +A + G+ V L + ++Q+ +TVSP
Sbjct: 1043 TTVLTMKLYQIEQHSFIASQ---GIELEVDLSVVDPKDRLAMDTRKGESFVKQVLITVSP 1099
Query: 959 KLCFAIKQHISQMKSSAFGGKFVAESSL--ID-IDDEAEFKDIPNSFADIPAESYPLVIT 1015
KLC AIK HI ++K G + L D IDD EF D+P++F+D+ E YPL IT
Sbjct: 1100 KLCSAIKNHICRLKRFCSGDVSDQPNPLHMYDVIDDPEEFTDVPDNFSDLQHEHYPLTIT 1159
Query: 1016 FHKFLMMLDGTLGSSYFDRFH 1036
+ KFLMMLDGT+ SS+FD F+
Sbjct: 1160 YRKFLMMLDGTMKSSFFDMFY 1180
>gi|218195491|gb|EEC77918.1| hypothetical protein OsI_17248 [Oryza sativa Indica Group]
gi|222629476|gb|EEE61608.1| hypothetical protein OsJ_16025 [Oryza sativa Japonica Group]
Length = 2693
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/1044 (39%), Positives = 601/1044 (57%), Gaps = 92/1044 (8%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
D+ C++C Q E LS LN SQ A+ S + ++C H ++LIWGPPGTG
Sbjct: 208 DDVCDICVKQDEHCLALCTEQLLSINLNQSQVDAIESVISAVQCRHLNLMKLIWGPPGTG 267
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTVS LL L +K RTL C PTNVAI + R + ++++ + + L F LGD+L
Sbjct: 268 KTKTVSALLWALACLKCRTLTCAPTNVAIVGVCTRFLHILRDFNKNANENFLPFSLGDVL 327
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN 181
L GN + + +++++LD R L +CF+ L+GW + ASM F ++C S Y +++
Sbjct: 328 LFGNKYNMDITEDLQDVFLDCRADELVECFSSLSGWRYRIASMASFFEDCGSQYDMLLED 387
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIP 241
+ +S+ I C FL+F++ +F A L+ CI N +P
Sbjct: 388 DG--RSDPI---------C-------------FLDFIKTQFDVTATALKKCIMNLLIHLP 423
Query: 242 KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEE---LLSHSVDEGLSKSIVGIKY 298
+ D+ ++ L L+ E LL +NL + + LS D +KS I+
Sbjct: 424 RKCFSHDSISNISMLFDSLEKVEALLHHENLTDDGAKRGFGFLSIQ-DISCAKSAFIIEK 482
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L++ + C +L L+ S L+LP+ +++ +++ +C++ A+L T+SSSY LH
Sbjct: 483 ELNRAKLSCLQLLEDLERS---LDLPTGRDRNWIQN----YCMRNATLIFCTSSSSYRLH 535
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ + PL+ L++DEAAQ V EA FG
Sbjct: 536 HMEIAPLDVLIVDEAAQ----------------------------------VCKEAGFGI 561
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFERL L + KHLL+IQYRM P IS FPN FY KI D V Y K + + P +
Sbjct: 562 SLFERLVVLDFEKHLLNIQYRMDPRISLFPNVQFYGRKILDGPNVMSSVYNKDYTNLP-F 620
Query: 479 GPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
G Y+FIN+ GREE +S RN+VEV+VV+ ++ ++K W + LSIG++SPYS+Q
Sbjct: 621 GTYAFINISDGREEKEGTGNSWRNLVEVAVVLHLIQTIFKTWKRKGQMLSIGVISPYSSQ 680
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V +I+ +LG Y GF V+V S+DGFQG E+D+II+STVRSN G +GFL++ +R NV
Sbjct: 681 VDSIESRLGKLYDTCDGFHVRVKSVDGFQGEEDDIIILSTVRSNVKGIVGFLADEQRTNV 740
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
ALTRARHCLWILGNA TL +VW+ L+ DA R+C +A +D + K +L VK ELDE
Sbjct: 741 ALTRARHCLWILGNANTLYSSGTVWKDLIADAQRRKCIIDATNDAAICKLVLKVKNELDE 800
Query: 657 LDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVD 716
LD+LLN +S +F + RWKV FS+ F KSF KL ++ V+ L+KL GWR +N++
Sbjct: 801 LDDLLNADSAVFSNTRWKVVFSDEFKKSFAKLKYPQLRREVLQKLIKLGVGWRTTMKNLN 860
Query: 717 SVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVK 776
+ K +KV Y++ + DI K +Y Q++++WD+L ++V + V RL+N++
Sbjct: 861 FNVIDPFQLAKVYKVRDLYLVWSTDIEKSERYVQIIRIWDLLSHQNVARTVQRLENLFSM 920
Query: 777 YTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAEN 836
YT E+++ C+ EG LEVP W A +++R++ + + D D D EN
Sbjct: 921 YTDEYLDKCRRVKTEGKLEVPVIWDAEHDIIRYRKVLEVDAQEDHD----HVDISYAMEN 976
Query: 837 SNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGT 896
S VSES LMKFY LSS V HLL+ G E+D+PFE+TDE+ +I P ++FILGRSGT
Sbjct: 977 SKVSESFLLMKFYSLSSGVAKHLLTATDGSEIDIPFELTDEEQAIIRFPLTSFILGRSGT 1036
Query: 897 GKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTV 956
GKTTVLT KL Q + + ++ G+N + S A++ L E E ++Q+F+TV
Sbjct: 1037 GKTTVLTMKLIQ---IWQQSLIASRGLNLD-----ERNSTAQKDLSEVE-TFVKQVFITV 1087
Query: 957 SPKLCFAIKQHISQMKSSAFGGKFVAESSLI-----DIDDEAEFKDIPNSFADIPAESYP 1011
SPKLC AI+ I ++ + +G V++ + I +DD +F DIP+SF +P E YP
Sbjct: 1088 SPKLCSAIRNQICKL--TRYGSGDVSDQASILQMPDMVDDLEDFTDIPDSFIGLPCEHYP 1145
Query: 1012 LVITFHKFLMMLDGTLGSSYFDRF 1035
L ITF KFLMMLDGT +S+F F
Sbjct: 1146 LTITFRKFLMMLDGTCKTSFFGTF 1169
>gi|32492200|emb|CAE03468.1| OSJNBa0083N12.5 [Oryza sativa Japonica Group]
Length = 2646
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/1022 (39%), Positives = 593/1022 (58%), Gaps = 92/1022 (9%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVC 83
LS LN SQ A+ S + ++C H ++LIWGPPGTGKTKTVS LL L +K RTL C
Sbjct: 219 LSINLNQSQVDAIESVISAVQCRHLNLMKLIWGPPGTGKTKTVSALLWALACLKCRTLTC 278
Query: 84 TPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYR 143
PTNVAI + R + ++++ + + L F LGD+LL GN + + +++++LD R
Sbjct: 279 APTNVAIVGVCTRFLHILRDFNKNANENFLPFSLGDVLLFGNKYNMDITEDLQDVFLDCR 338
Query: 144 VKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKE 203
L +CF+ L+GW + ASM F ++C S Y ++++ +S+ I C
Sbjct: 339 ADELVECFSSLSGWRYRIASMASFFEDCGSQYDMLLEDDG--RSDPI---------C--- 384
Query: 204 ADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSF 263
FL+F++ +F A L+ CI N +P+ D+ ++ L L+
Sbjct: 385 ----------FLDFIKTQFDVTATALKKCIMNLLIHLPRKCFSHDSISNISMLFDSLEKV 434
Query: 264 ETLLFEDNLVSEELEE---LLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
E LL +NL + + LS D +KS I+ L++ + C +L L+ S
Sbjct: 435 EALLHHENLTDDGAKRGFGFLSIQ-DISCAKSAFIIEKELNRAKLSCLQLLEDLERS--- 490
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L+LP+ +++ +++ +C++ A+L T+SSSY LH + + PL+ L++DEAAQ
Sbjct: 491 LDLPTGRDRNWIQN----YCMRNATLIFCTSSSSYRLHHMEIAPLDVLIVDEAAQ----- 541
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
V EA FG SLFERL L + KHLL+IQYRM
Sbjct: 542 -----------------------------VCKEAGFGISLFERLVVLDFEKHLLNIQYRM 572
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSC 498
P IS FPN FY KI D V Y K + + P +G Y+FIN+ GREE +S
Sbjct: 573 DPRISLFPNVQFYGRKILDGPNVMSSVYNKDYTNLP-FGTYAFINISDGREEKEGTGNSW 631
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
RN+VEV+VV+ ++ ++K W + LSIG++SPYS+QV +I+ +LG Y GF V+V
Sbjct: 632 RNLVEVAVVLHLIQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRLGKLYDTCDGFHVRV 691
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
S+DGFQG E+D+II+STVRSN G +GFL++ +R NVALTRARHCLWILGNA TL
Sbjct: 692 KSVDGFQGEEDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSG 751
Query: 619 SVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFS 678
+VW+ L+ DA R+C +A +D + K +L VK ELDELD+LLN +S +F + RWKV FS
Sbjct: 752 TVWKDLIADAQRRKCIIDATNDAAICKLVLKVKNELDELDDLLNADSAVFSNTRWKVVFS 811
Query: 679 ENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIIC 738
+ F KSF KL ++ V+ L+KL GWR +N++ + K +KV Y++
Sbjct: 812 DEFKKSFAKLKYPQLRREVLQKLIKLGVGWRTTMKNLNFNVIDPFQLAKVYKVRDLYLVW 871
Query: 739 TIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPK 798
+ DI K +Y Q++++WD+L ++V + V RL+N++ YT E+++ C+ EG LEVP
Sbjct: 872 STDIEKSERYVQIIRIWDLLSHQNVARTVQRLENLFSMYTDEYLDKCRRVKTEGKLEVPV 931
Query: 799 TWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSLMKFYRLSSVVVSH 858
W A +++R++ + + D D D ENS VSES LMKFY LSS V H
Sbjct: 932 IWDAEHDIIRYRKVLEVDAQEDHD----HVDISYAMENSKVSESFLLMKFYSLSSGVAKH 987
Query: 859 LLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRKLFQKEELHRMAME 918
LL+ G E+D+PFE+TDE+ +I P ++FILGRSGTGKTTVLT KL Q + + ++
Sbjct: 988 LLTATDGSEIDIPFELTDEEQAIIRFPLTSFILGRSGTGKTTVLTMKLIQ---IWQQSLI 1044
Query: 919 EFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAIKQHISQMKSSAFGG 978
G+N + S A++ L E E ++Q+F+TVSPKLC AI+ I ++ + +G
Sbjct: 1045 ASRGLNLD-----ERNSTAQKDLSEVE-TFVKQVFITVSPKLCSAIRNQICKL--TRYGS 1096
Query: 979 KFVAESSLI-----DIDDEAEFKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSSYFD 1033
V++ + I +DD +F DIP+SF +P E YPL ITF KFLMMLDGT +S+F
Sbjct: 1097 GDVSDQASILQMPDMVDDLEDFTDIPDSFIGLPCEHYPLTITFRKFLMMLDGTCKTSFFG 1156
Query: 1034 RF 1035
F
Sbjct: 1157 TF 1158
>gi|359473529|ref|XP_003631316.1| PREDICTED: uncharacterized protein LOC100855072 [Vitis vinifera]
Length = 883
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/679 (51%), Positives = 453/679 (66%), Gaps = 22/679 (3%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E+CELC S GV ETFG LSS LN SQ AVL+ LR++ C+HK++++LI GPPGT
Sbjct: 219 VKESCELCPESSRGVRTETFGTILSSKLNKSQMAAVLASLRKIHCNHKSSVELICGPPGT 278
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKT+T+S LL LL RTL C PT VA+KE+A+RV+K +KES E D +DA LGD
Sbjct: 279 GKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMKHLKESFETDPQKDASICSLGD 338
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
+L G+ + V S ++EIYLD+RV+RLA CF PL GW H F SM+ FL+ VS
Sbjct: 339 LLFFGDYDSTAVGSEMKEIYLDHRVERLAKCFEPLNGWRHSFNSMIVFLEGGVSEDRVSE 398
Query: 180 DNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTR 239
D S + I+G K K +L+ R++FK + LR + T
Sbjct: 399 DELSKMEEGSIDGSKGKRK--------------TYLQLAREQFKSTSLHLREVVITLSTH 444
Query: 240 IPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL 299
IPK +I + NF M +L+ L SFE+LL +DN+VSEELE L + + S V
Sbjct: 445 IPKSFIMEHNFQAMLSLLGFLRSFESLLHQDNMVSEELENLFAGKKNVKHSSKSVADSST 504
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L + RSEC +L+ L++S +EL P KDLL D FC + AS STAS S+ LH
Sbjct: 505 LMEIRSECLHILKNLRNSLDELQFPKNNSKDLLID----FCFQTASSIFSTASDSHKLHL 560
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
V M+PLN LVIDEAAQL+E ESTIPLQL GIK A+L GD+ QLP+ V S + + A FGRS
Sbjct: 561 VDMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQLPSRVTSNICDRAGFGRS 620
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
L+ERLS L ++KH L++QYRMHPSIS FP S FY N+I D+ V+ ++YEK++L P++
Sbjct: 621 LYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFR 680
Query: 480 PYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDS-KEKLSIGIVSPYSAQ 536
PY FIN+ GREE E HS +NMVEV+V+MKI+ NLY+ W KE+L IG++S Y+AQ
Sbjct: 681 PYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQDWRSGIKEELRIGVLSSYTAQ 740
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V+ IQE+ KY N+ F+VKV +IDGFQGGEED+I+ISTVR+NN GS+G +++ K NV
Sbjct: 741 VLEIQERFRQKYENNDRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNV 800
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
ALTRARH LWILG+ RTL ++VW+ +VHDA R C NAD+D DL I VK ELDE
Sbjct: 801 ALTRARHGLWILGSERTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTIFKVKTELDE 860
Query: 657 LDELLNPESRLFRSQRWKV 675
LD+LLN +S LF S RWKV
Sbjct: 861 LDDLLNKDSSLFNSARWKV 879
>gi|359473531|ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
Length = 2818
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/706 (50%), Positives = 464/706 (65%), Gaps = 25/706 (3%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V E+CELC S GV E FG LSS LN SQ AVL+ LR++ C+HK++++LI GPPGT
Sbjct: 389 VKESCELCPESSSGVCTENFGTILSSKLNKSQMAAVLASLRKIHCNHKSSVELICGPPGT 448
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC-RDALFFPLGD 119
GKT+T+S LL LL RTL C PT VA+KE+A+RV+K +KES E D +DA LGD
Sbjct: 449 GKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMKHLKESFETDPQKDASLCSLGD 508
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L G+ + V S ++EIYLD+RV+RLA CF PL GW H F SM+ FL+ VS H
Sbjct: 509 -LFFGDYDSTGVGSEMKEIYLDHRVERLAKCFEPLNGWRHSFNSMIVFLEGGVSEDHVSE 567
Query: 180 DNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTR 239
D S + I G S + K +L+ R++FK + LR + T
Sbjct: 568 DELSKMEEGSIEG--------------SKGKRKTYLQLAREQFKSTSLHLRELVNTLSTH 613
Query: 240 IPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL 299
IPK +I + NF M +L+ L SFE+LL +DN+VSEELE L + + S V
Sbjct: 614 IPKSFIMEHNFQAMLSLLGFLSSFESLLHQDNMVSEELENLFAGKENVKHSSKSVADSST 673
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L RSEC +L+ LQ+S +EL P + KDLL D FC + AS STAS S+ LH
Sbjct: 674 LMYIRSECLHILKNLQNSLDELQFPKNIRKDLLID----FCFQTASSIFSTASDSHKLHL 729
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
V M+PLN LVIDEAAQL+E ESTIPLQL GIK A+L GD+ QLP+ V S + ++A FGRS
Sbjct: 730 VDMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQLPSRVTSNICDKAGFGRS 789
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
L+ERLS L ++KH L++QYRMHPSIS FP S FY N+I D+ V+ ++YEK++L P++
Sbjct: 790 LYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFR 849
Query: 480 PYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDS-KEKLSIGIVSPYSAQ 536
Y FIN+ GREE E HS +NMVEV+V+MKI+ NLY+AW KE+L IG++SPY+AQ
Sbjct: 850 LYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQ 909
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V+ IQE+L KY N+ F+VKV +IDGFQGGEED+I+ISTVR+NN GS+G +++ K NV
Sbjct: 910 VLEIQERLKQKYENNDMFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNV 969
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
ALTRARHCLWILG+ RTL ++VW+ +VHDA R C NAD+D DL + VK EL E
Sbjct: 970 ALTRARHCLWILGSERTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELHE 1029
Query: 657 LDELLNPESRLFRSQRWK--VNFSENFLKSFRKLTSDPTKKSVIHL 700
LD+LLN +S LF S RWK + LK + L + K V HL
Sbjct: 1030 LDDLLNRDSSLFNSARWKKECGYYTQVLKVWDILALEDIPKLVKHL 1075
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/296 (54%), Positives = 213/296 (71%), Gaps = 5/296 (1%)
Query: 748 YFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVV 807
Y QVLKVWDIL LED+PK+V LD+++ T ++++ CK+KS EG LE+P +WT + ++V
Sbjct: 1053 YTQVLKVWDILALEDIPKLVKHLDSLFEMNTDDYLSRCKKKSWEGELEIPMSWTTSYDIV 1112
Query: 808 RFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRE 867
++K+L++N S++SG A R ENS VSES +MKFY ++ +V H +S GRE
Sbjct: 1113 QYKSLSNNATGKISNVSGLA--RRGGFENSIVSESFLIMKFYSVTFNMVRHFISGHDGRE 1170
Query: 868 LDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVNNSV 927
LDLPFE+TD++ E I RS+FILGRSGTGKTTVL+ KLFQKE+L +A E Y V
Sbjct: 1171 LDLPFELTDQERETIFFNRSSFILGRSGTGKTTVLSMKLFQKEQLFHIASEGLYEVEGHS 1230
Query: 928 TLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESSLI 987
+ H SQ +E E G+ + L QLFVTVSP+LC AI++ +S +S A GG+F+ ESS +
Sbjct: 1231 STHASQRNEIGECTGDAKGACLHQLFVTVSPRLCNAIRRQLSHFQSFASGGEFLVESSSL 1290
Query: 988 D---IDDEAEFKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFHDIRK 1040
D IDD +FKDIP+SF +IP++SYPLVITFHKFLMMLDGT+G+SYF RF D K
Sbjct: 1291 DLDYIDDTVQFKDIPDSFVNIPSKSYPLVITFHKFLMMLDGTVGNSYFSRFPDAHK 1346
>gi|242074206|ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
gi|241938222|gb|EES11367.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
Length = 1625
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/1054 (37%), Positives = 602/1054 (57%), Gaps = 117/1054 (11%)
Query: 2 DETCELCSMQSEGVWNETFGPSLS-STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
++ C +C+ + + + +F L LN SQ A+ S + +RC H +LIWGPPGT
Sbjct: 181 EDVCAICAKKDDCL--TSFAEQLLLVNLNQSQVDAIESIISAVRCRHLNLTKLIWGPPGT 238
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTVS +L L +K RTL C PTNVA+ + R +K +KE ++ + L LGD+
Sbjct: 239 GKTKTVSAMLWALACLKCRTLTCAPTNVAVVGVCTRFLKNLKEFNKQIDKTGLPLSLGDV 298
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
LLLGN + + ++E++LDYR L +CF+ L+GW + ASM+ F ++C S Y ++
Sbjct: 299 LLLGNKYNMDITEELQEVFLDYRADELTECFSSLSGWRYIIASMISFFEDCGSRYDMLLE 358
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
++ S C FL+F++ +F A ++ C+ +
Sbjct: 359 DDESHDSV-----------C-------------FLDFLKKQFDVAAKAVKKCMMTLWLHL 394
Query: 241 P-KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGL--SKSIVGIK 297
P KC+ +N + ++ L+ L+ + LL + +L E ++ E ++ I I+
Sbjct: 395 PGKCF-SHENVNNISMLLVWLEKIDALLCDGDLTDESVKRGFDFQSTENSINAEPISSIE 453
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
L +S C +L+ L+ N LNLP + +++ +++ +C++ A+L TASSSY L
Sbjct: 454 KELGGAKSLCLKLLKDLR---NSLNLPVSADRNWIQN----YCMRNATLIFCTASSSYRL 506
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
H+ + PL+ L++DEAAQ+KE E IPL+L +KH VL GD+CQL +V S+V EA FG
Sbjct: 507 HNATIAPLDVLIVDEAAQVKECELVIPLRLRWLKHVVLVGDDCQLRPLVRSQVCKEAGFG 566
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
SLFERL L + KHLL+IQYRM+P IS FPN+ FYE KI D V SY K ++ P
Sbjct: 567 ISLFERLVILNFEKHLLNIQYRMNPCISLFPNAKFYEKKILDGPNVFSSSYNKDYMGLP- 625
Query: 478 YGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+G Y+FIN+ GRE E +S RN+VEV+VV+ ++ ++K+W + +SIG+VSPYS+
Sbjct: 626 FGSYAFINITDGREEKEGAGNSWRNLVEVAVVLHLIQTIFKSWRKRGQGISIGVVSPYSS 685
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QV AI+++LG KY S GF V+V SIDGFQG E+D+II+STVRSN G++GFL++++R N
Sbjct: 686 QVAAIKDRLGKKYDTSDGFHVRVKSIDGFQGEEDDVIILSTVRSNGRGNVGFLADNQRTN 745
Query: 596 VALTRARHCLWILGNARTLTRKKSV----WEALVHDANARQCFFNADDDKDLGKAILAVK 651
VALTRAR G+ T + + L+H Q G+ L ++
Sbjct: 746 VALTRAR-----CGSICCFTVVEGIVFGFLGMLIHCIKVGQS----------GQTSLLMR 790
Query: 652 KELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPK 711
++++ L ++ V S+NF +SF KL S ++
Sbjct: 791 RDVNVFPMPLMTQN--------CVVLSDNFRRSFMKLKSPLLRR---------------- 826
Query: 712 KRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLD 771
+ K +++ Y++ + D+ K +YFQ++++WDIL + + + V L+
Sbjct: 827 ------------ELAKAYRIRDLYLVWSTDLEKNERYFQIIRIWDILSHQHIARTVQHLE 874
Query: 772 NIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKN---LADNDNNSGSDLSGAAF 828
N++ YT ++++HC+ +EG LEVP W A ++VR+K L D +++ D S A
Sbjct: 875 NLFSMYTDDYLDHCRRVQLEGKLEVPIVWDAEHDIVRYKKDCRLDDKEDHDHVDTSCA-- 932
Query: 829 DSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRST 888
EN+ VSES LMKFY LSS V HLL+ G E+++PFE+TDE+ +I P ++
Sbjct: 933 -----LENTKVSESFLLMKFYSLSSGVAKHLLTATDGTEIEIPFELTDEEEAIIRFPLTS 987
Query: 889 FILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGVN-NSVTLHCSQESEAEEGLGETERP 947
FILGRSGTGKTTVLT KL+Q E+ +A + G+ + V L + +
Sbjct: 988 FILGRSGTGKTTVLTMKLYQIEQHSLIASQ---GIELDEVDLSVADPKSSLAMDTNKRES 1044
Query: 948 ILRQLFVTVSPKLCFAIKQHISQMKSSAFGGKFVAESS----LIDI-DDEAEFKDIPNSF 1002
++Q+ +TVSPKLC AIK HI +++ FG V++ + D+ DD EF D+P++F
Sbjct: 1045 FVKQVLITVSPKLCSAIKNHICRLRR--FGSGDVSDQPNTLHMHDVFDDLEEFTDVPDNF 1102
Query: 1003 ADIPAESYPLVITFHKFLMMLDGTLGSSYFDRFH 1036
+D+ YPL IT+ KFLMMLDGT+ +S+FD F+
Sbjct: 1103 SDLLHGHYPLTITYRKFLMMLDGTVHTSFFDMFY 1136
>gi|147842150|emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
Length = 1003
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/850 (45%), Positives = 517/850 (60%), Gaps = 70/850 (8%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
E C LC S+ V N P +SS LNDSQ AVLSC+ C H+ +I+ IWGPPGTG
Sbjct: 156 EECALCX--SDSVSNSE--PMVSSFDLNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTG 211
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTV+ LL L +MK RT+ C PTN+A+ + R+V LV++S E + LGDIL
Sbjct: 212 KTKTVATLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGT-----YGLGDIL 266
Query: 122 LLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L GN +R+K+D + +++LD+R K LA+CF+P +GW H SM+ L++ +Y TY+
Sbjct: 267 LFGNGKRMKIDDHRDLHDVFLDFRXKILANCFSPRSGWKHSLESMICLLEDPKEMYSTYL 326
Query: 180 --------------DNESMKQSEDINGDIIKEKECGKEADV------------------- 206
+ E QS+ B D K K+ D+
Sbjct: 327 RERXNQGKGVQTBQEKEEDIQSQSFBKDGRKNKKSWMRKDIERTLKNSKKGKGKKQQDKN 386
Query: 207 ----SDVEIKPFL---EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL 259
+D L EF + +F I L+ CI T +P I + M L
Sbjct: 387 SEGATDGSCDKLLTLEEFFKKKFYDIVNNLKFCIPKLRTHLPTSLIPLEVXKNMIGAHRL 446
Query: 260 LDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFN 319
L+SF TL ++ S+ L+E++ D G S V HK R + +LR L+ +
Sbjct: 447 LESFITLFQNVSVESKGLKEVIEKIGDAGKS---VDRFCKFHKTRRKFLEILRCLRQA-- 501
Query: 320 ELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKES 379
+ +P+ + +KSFCL+ A+L TASSS + V +P+ LVIDEAAQLKE
Sbjct: 502 -IEVPNTTD----HYRIKSFCLQNATLLFCTASSSAKI-PVGGKPIELLVIDEAAQLKEC 555
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYR 439
ES IPLQ+SGI+HA+L GDE QLPAMV+SK+S EA FGRSLF+RL LG+ KHLL++QYR
Sbjct: 556 ESAIPLQISGIRHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYR 615
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSC 498
MHPSIS FPN FY+N I D+ V++R YE+ +LHG MYG YSFINV G+EEF +S
Sbjct: 616 MHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEEFDYRYST 675
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAV 556
RNMVEV VV +++ L KA K+++S+GI+SPY AQV AIQ++LG KY +SA F+V
Sbjct: 676 RNMVEVVVVSEMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSV 735
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
V S+DGFQGGEED+IIISTVR N GS+GF+SN +R NVALTRAR+CLWI GN TL
Sbjct: 736 SVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEH 795
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVN 676
+VW LV+DA R CF NA++D +L +AI EL EL L +S LFR RWKV+
Sbjct: 796 SGTVWGKLVNDAKDRGCFHNAEEDNNLARAITTSLVELGELHLLQKXDSLLFRKARWKVH 855
Query: 677 FSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWR--PKKRNVDSVCGSSLHIIKQFKVEGF 734
S++F KS ++ S V LL KLS+GWR + N +++ G+ L +++ +KV
Sbjct: 856 XSDDFWKSMVRIKSVEIHNKVFCLLEKLSSGWRRPDNEANPNTINGTCLQLLELYKVTKI 915
Query: 735 Y-IICTIDIVKE-SQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEG 792
++ +++I+KE S Y QVLKVWDILP+E PK ARL+N++ ++HCK K +EG
Sbjct: 916 LNLVWSVEILKEDSNYIQVLKVWDILPMERTPKQAARLENLFGNKRVIDMDHCKFKCVEG 975
Query: 793 NLEVPKTWTA 802
NLEVP TW A
Sbjct: 976 NLEVPMTWPA 985
>gi|359490550|ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
Length = 1076
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 379/840 (45%), Positives = 512/840 (60%), Gaps = 70/840 (8%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
E C LCS S+ V N P +SS LNDSQ AVLSC+ C H+ +I+ IWGPPGTG
Sbjct: 257 EECALCS--SDSVSNSE--PMVSSFDLNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTG 312
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTV+ LL L +MK RT+ C PTN+A+ + R+V LV++S E + LGDIL
Sbjct: 313 KTKTVATLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGT-----YGLGDIL 367
Query: 122 LLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L GN +R+K+D + +++LD+RVK LA+CF+P +GW H SM+ L++ +Y TY+
Sbjct: 368 LFGNGKRMKIDDHRDLHDVFLDFRVKILANCFSPRSGWKHSLESMICLLEDPKEMYSTYL 427
Query: 180 --------------DNESMKQSEDINGDIIKEKECGKEADV------------------- 206
+ E QS+ N D K K+ D+
Sbjct: 428 RERMNQGKGVQTNQEKEEDIQSQSFNKDGRKNKKSWMRKDIERTLKNSKKGKGKKQQDKN 487
Query: 207 ----SDVEIKPFL---EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL 259
+D L EF + +F I L+ CI T +P I + M L
Sbjct: 488 SEGATDGSCDKLLTLEEFFKKKFYDIVNNLKFCIPKLRTHLPTSLIPLEVAKNMIGAHRL 547
Query: 260 LDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFN 319
L+SF TL ++ S+ L+E++ D G S V HK R + +LR L+ +
Sbjct: 548 LESFITLFQNVSVESKGLKEVIEKIGDAGKS---VDRFCKFHKTRRKFLEILRCLRQA-- 602
Query: 320 ELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKES 379
+ +P+ + +KSFCL+ A+L TASSS + V +P+ LVIDEAAQLKE
Sbjct: 603 -IEVPNTTD----HYRIKSFCLQNATLLFCTASSSAKI-PVGGKPIELLVIDEAAQLKEC 656
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYR 439
ES IPLQ+SGI+HA+L GDE QLPAMV+SK+S EA FGRSLF+RL LG+ KHLL++QYR
Sbjct: 657 ESAIPLQISGIRHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYR 716
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSC 498
MHPSIS FPN FY+N I D+ V++R YE+ +LHG MYG YSFINV G+EEF +S
Sbjct: 717 MHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEEFDYRYST 776
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAV 556
RNMVEV VV +++ L KA K+++S+GI+SPY AQV AIQ++LG KY +SA F+V
Sbjct: 777 RNMVEVVVVSEMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSV 836
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
V S+DGFQGGEED+IIISTVR N GS+GF+SN +R NVALTRAR+CLWI GN TL
Sbjct: 837 SVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEH 896
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVN 676
+VW LV+DA R CF NA++D +L +AI EL EL L +S LFR RWKV+
Sbjct: 897 SGTVWGKLVNDAKDRGCFHNAEEDNNLARAITTSLVELGELHLLQKQDSLLFRKARWKVH 956
Query: 677 FSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWR--PKKRNVDSVCGSSLHIIKQFKVEGF 734
FS++F KS ++ S V LL KLS+GWR + N +++ G+ L +++ +KV
Sbjct: 957 FSDDFWKSMVRIKSVEIHNKVFCLLEKLSSGWRRPDNEANPNTINGTCLQLLELYKVTKI 1016
Query: 735 Y-IICTIDIVKE-SQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEG 792
++ +++I+KE S Y QVLKVWDILP+E PK ARL+N++ ++HCK K +EG
Sbjct: 1017 LNLVWSVEILKEDSNYIQVLKVWDILPMERTPKQAARLENLFGNKRVIDMDHCKFKCVEG 1076
>gi|449443986|ref|XP_004139756.1| PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus]
gi|449521497|ref|XP_004167766.1| PREDICTED: uncharacterized LOC101214715 [Cucumis sativus]
Length = 737
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/651 (52%), Positives = 439/651 (67%), Gaps = 40/651 (6%)
Query: 23 SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLV 82
SL TLN+SQA+AV +CL ++ C HK ++LIWGPPGTGKTKTV +LL L + RTL
Sbjct: 68 SLFCTLNESQARAVGTCLNRISCVHKYGVELIWGPPGTGKTKTVGVLLFELRKKNRRTLA 127
Query: 83 CTPTNVAIKELAARVVKLVKESVER--DCRDALFFPLGDILLLGNNERLKVDSGVEEIYL 140
C PTN AI ++A+R + LVKE ++ + LF LGDILL GN ERLKV + IYL
Sbjct: 128 CAPTNTAIMQVASRFLLLVKEMHDKKDNGSKGLFCNLGDILLFGNKERLKVGESDKYIYL 187
Query: 141 DYRVKRLADCFAPLTGWSHCFASMVDFLD-NCVSLYHTYIDNESMKQSEDINGDIIKEKE 199
DYR+ RL CF L GW CF+SM+DFL+ +CVS Y T++ + K+
Sbjct: 188 DYRIGRLKKCFNQLNGWRFCFSSMIDFLEGHCVSQYRTFLKDH---------------KQ 232
Query: 200 CGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL 259
K + S F+EFVR +K I+ L+ CI FCT IP I K NF ++ ++SL
Sbjct: 233 RSKMVEYS------FIEFVRMHYKTISRSLKECISIFCTHIP-IAILKHNFERLSCVMSL 285
Query: 260 LDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKY-LLHKRRSECHFVLRKLQSSF 318
++SFE+LL + + S+ELE+L V+E + + ++Y L K R++C VLR L+ S
Sbjct: 286 INSFESLLLSNGVQSKELEKLFLKKVEEEVVED-QNVEYEKLLKGRNDCVLVLRSLEYSL 344
Query: 319 NELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA-MEPLNFLVIDEAAQLK 377
+EL LP K L + FC + ASLF T SSS+ L+S+ + PL LV+DEAAQLK
Sbjct: 345 SELRLPQTSSKGGL----RKFCFRNASLFFCTVSSSFRLYSMRNVAPLETLVMDEAAQLK 400
Query: 378 ESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQ 437
E ES IPLQ IKHA+L GDECQLPAMVESKV++EA FGRSLFERLS LGY KHLL++Q
Sbjct: 401 ECESAIPLQFPAIKHAILIGDECQLPAMVESKVADEAKFGRSLFERLSLLGYQKHLLNVQ 460
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIE 495
YRMHPSISCFPNS FY N+I D V+ Y K+FL+GPM+G YSF+++ GREE I
Sbjct: 461 YRMHPSISCFPNSKFYSNQISDGPNVKTEGYVKKFLNGPMFGSYSFMDINEGREEKDGIT 520
Query: 496 HSCRNMVEVSVVMKILLNLYK-----AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVN 550
S +NMVEV VV++I+ LY +DS EK+SIG+VSPYSAQV AI+ KLG Y
Sbjct: 521 QSWKNMVEVDVVLQIIHKLYNKGTSTTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNK 580
Query: 551 SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGN 610
F V+V S+DGFQGGEED+IIISTVRSN SIGFLS+++R NVALTRAR+CLWILGN
Sbjct: 581 CNSFQVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGN 640
Query: 611 ARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE-LDEL 660
TL++ SVWE LV DA R CFFNA +DKDL + + K +++E +D+L
Sbjct: 641 FNTLSKSDSVWEDLVFDAKNRGCFFNAKEDKDLANVMSSCKMDIEESIDDL 691
>gi|224108478|ref|XP_002333388.1| predicted protein [Populus trichocarpa]
gi|222836389|gb|EEE74796.1| predicted protein [Populus trichocarpa]
Length = 1087
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 372/818 (45%), Positives = 498/818 (60%), Gaps = 46/818 (5%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
SS LN SQ AVLSC+ RC H+ T++L+ GPPGTGKTKT S LL LL+MK RTL C
Sbjct: 241 SSNLNSSQEAAVLSCIHTARCWHQYTVKLVQGPPGTGKTKTASCLLHALLRMKCRTLTCA 300
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE---IYLD 141
PTN+A+ E+AARVV V + VE + + +GDI+L GN ER+K D + ++LD
Sbjct: 301 PTNIAVVEVAARVVSTVADLVEYET-----YGMGDIILFGNWERMKFDGDQNDLLHVFLD 355
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECG 201
+R L CF P TGW AS++ L++ + YH Y+ + K+ G + E+
Sbjct: 356 HRADILEKCFDPSTGWKRILASLISLLEDSEAQYHLYLQDNMGKE-----GLLTCEQFVW 410
Query: 202 KEADVSDVEIK---------------PFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
K D S ++K +FV RF L+ CI N T +P I
Sbjct: 411 KRFDFSGKQLKFCIVNLYTHLPTTLISLQQFVWKRFDFSGKQLKFCIVNLYTHLPTTLIS 470
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSE 306
+M + L+ S ETLL + E L+++L + DE + + L++++R E
Sbjct: 471 LQVMRIMTRALDLMTSLETLLLSLSAADEGLKQILGENEDE--ERKLHNRIKLINEKR-E 527
Query: 307 CHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLN 366
C LR L F +P +K+ +E FCL A L T SSS LHS+ M PL
Sbjct: 528 CLNTLRLLSLKFQ---VPEFADKNAIE----KFCLSNACLIFCTVSSSARLHSIRMAPLR 580
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
LVIDEAAQLKE ESTIPLQL G+ HA+L GDE QLPA+V S++S +A FGRSLFERL
Sbjct: 581 CLVIDEAAQLKECESTIPLQLFGLHHAILIGDERQLPAIVNSEISGKAGFGRSLFERLVK 640
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG HLL+IQYRMHPSIS FPN+ FY +++ D+ V++ Y +RFL G M+ YSFIN+
Sbjct: 641 LGCKSHLLNIQYRMHPSISLFPNTEFYGSQVLDAPNVKETGYRRRFLQGDMFESYSFINL 700
Query: 487 FGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EEF+E S +N VE + I+ L+K + +K+SIGI+SPY AQV AIQEK+G
Sbjct: 701 AHGKEEFVEQRSFKNTVEAAAAADIVGRLFKDINGTGQKVSIGIISPYQAQVHAIQEKIG 760
Query: 546 SKYVNS-AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
+S + F+V V ++DGFQGGEEDLIIISTVRSN GS+GF+SN +R NVALTRAR C
Sbjct: 761 KFISDSDSAFSVSVGTVDGFQGGEEDLIIISTVRSNENGSVGFVSNPQRANVALTRARFC 820
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPE 664
LWILGN TL R S+W+ +V+DA RQCF+NA++D+ L +AI E LD LL
Sbjct: 821 LWILGNEATLVRSGSIWKKIVNDAKHRQCFYNAEEDESLDQAITESLIEHGRLDVLLRTH 880
Query: 665 SRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRP----KKRNVDSVCG 720
S LFR+ RW V FS++F +S ++ + K V+ LL KLSNGWR KKR++ G
Sbjct: 881 SPLFRNARWMVFFSDDFRRSVARVKNVRICKEVLSLLAKLSNGWRQRQSRKKRSLMVPSG 940
Query: 721 SSLHIIKQFKVEG-FYIICTIDIVKESQYF-QVLKVWDILPLEDVPKVVARLDNIYVKYT 778
S +I+Q+ V G ++ T+DI++E+ ++ VLKVWDILP D+PK+ LD ++ YT
Sbjct: 941 ISSPLIEQYNVSGQLNMVWTVDILQENSFWIHVLKVWDILPSSDIPKLAMSLDTLFWNYT 1000
Query: 779 AEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADND 816
E +N C K +EGNL VP WT S R + D D
Sbjct: 1001 EEQMNRCLYKCMEGNLVVPMRWTVDSCSDRQGSCGDAD 1038
>gi|224077408|ref|XP_002305249.1| predicted protein [Populus trichocarpa]
gi|222848213|gb|EEE85760.1| predicted protein [Populus trichocarpa]
Length = 1101
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 363/885 (41%), Positives = 505/885 (57%), Gaps = 100/885 (11%)
Query: 1 VDETCELCSM-QSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
V + C C + + V T G + S LN SQ +AVLSC+ C H+ +++LIWGPP
Sbjct: 215 VVDNCANCFIREKHNVDASTLGAYIRSFDLNASQEEAVLSCICARECHHRNSVKLIWGPP 274
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG 118
GTGKTKT+ LL + K RTL C PTNVA+ E+ R++ LV +E + LG
Sbjct: 275 GTGKTKTIGALLFAFFKRKCRTLTCAPTNVAVLEVTTRLLNLVIPKLEYQT-----YGLG 329
Query: 119 DILLLGNNERLKV--DSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYH 176
DI+L GN ER+K+ + +++LD R L++C AP +GW++ M+ L++ LYH
Sbjct: 330 DIILFGNGERMKICNHDDLLDVFLDCRAHILSNCLAPSSGWNYHLRLMICLLEDPGKLYH 389
Query: 177 TYI--------------------------------DNESMKQSEDINGDII--------- 195
Y+ D+ + K+S + N ++
Sbjct: 390 EYLQELANRKKDKNFKAQEKGILRNEKIQNNKEKQDDVNSKKSRNQNNNVFWRKVILQTL 449
Query: 196 -------KEKEC---------GKEADV------SDVEIKPFLEFVRDRFKCIAAPLRSCI 233
KEK C ++ D+ ++E F EFV +F +R +
Sbjct: 450 EESKKTWKEKSCCRKESRLKHNRKVDMVHFSQDHEIEGLTFEEFVNCKFNYCKDQMRMHV 509
Query: 234 FNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDE----GL 289
T +P I +M + L+ ++LL E L S S+DE G
Sbjct: 510 VIMHTHLPSSVISPRVVKMMIEFLEFLELLDSLL---QAADEGLSHAFSQSMDEPYGIGF 566
Query: 290 SKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLS 349
SK ++ L + R C +L+ L S F ++ E +K FCL++A L
Sbjct: 567 SK-----QHKLEEAREHCLKLLKLLHSKFTLPDISG-------ESKIKLFCLEKARLIFC 614
Query: 350 TASSSYMLHSVAM--EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
TASSS L++ M L L+IDEAAQLKE ESTIPLQ G++HA+L GDECQLPAMV+
Sbjct: 615 TASSSAKLYAEDMLRSSLEVLIIDEAAQLKECESTIPLQFPGLRHAILVGDECQLPAMVQ 674
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
SK+S +A FGRSLF RL+ LG+ KHLL++QYRMHPSIS FPN FY +I D+ V++RS
Sbjct: 675 SKISEKAEFGRSLFLRLAQLGHKKHLLNVQYRMHPSISLFPNVEFYGKQILDAPLVKERS 734
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
YEK FL G MYG YSFINV G EE + HS +N+VEV+VV +I+ L++ + KE LS
Sbjct: 735 YEKCFLQGKMYGSYSFINVDYGHEEADDRHSRKNVVEVAVVSEIVAKLFEESVSMKETLS 794
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
+G++SPYSAQV AIQEKLG + GF+V V S+DGFQGGEED+I+ISTVR + G
Sbjct: 795 VGVISPYSAQVSAIQEKLGKTLSRGSGNGFSVSVRSVDGFQGGEEDIIVISTVRCDLMGL 854
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLG 644
+GFL + +R NVALTRAR+CLWI+GN TL SVWE +V DA R F+NAD+D+ L
Sbjct: 855 VGFLKSPQRTNVALTRARYCLWIVGNGVTLGNSDSVWERMVIDAKTRGYFYNADEDESLA 914
Query: 645 KAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKL 704
+AI+A E+ + D+ N LF+S WKV+F + F K + + K VI +L KL
Sbjct: 915 QAIIAALVEVGKTDQFPNAHLVLFKSATWKVSFHDGFSKFVARTKTMEICKEVISMLRKL 974
Query: 705 SNGWRP--KKRNVDSVCGSSLHIIKQFKVEG-FYIICTIDIVKESQ-YFQVLKVWDILPL 760
+GWR K R+ + G S +++Q+K+ G Y++ T+DI++E+ FQVLKVWD+L L
Sbjct: 975 LSGWRQPHKGRDPNFTNGVSSQLLEQYKINGSLYLVWTVDILEENACIFQVLKVWDLLHL 1034
Query: 761 EDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSN 805
++P + +D Y KYT + IN CK + EGNL+VP TW SN
Sbjct: 1035 SEIPNLAKLVDTFYGKYTGDQINRCKLRHFEGNLQVPMTWPVHSN 1079
>gi|449463400|ref|XP_004149422.1| PREDICTED: uncharacterized protein LOC101220392 [Cucumis sativus]
Length = 877
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 337/655 (51%), Positives = 431/655 (65%), Gaps = 43/655 (6%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
+D +C+ C ++E + + L STLN+ QA+AV CL + C HK++I+LIWGPPGT
Sbjct: 190 LDFSCDAC--EAEVGMSFSHNDDLFSTLNEPQARAVQRCLEKASCAHKSSIELIWGPPGT 247
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDA-LFFPLGD 119
GKTKTV++LL+ + R L C PTN AI ++A+R++ LVKE E++ LF L D
Sbjct: 248 GKTKTVAVLLLQFRKNNHRVLTCAPTNTAIMQVASRLLSLVKEMHEKEYGSGELFCNLSD 307
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDN-CVSLYHTY 178
ILL+GN RLK++ + I+LDYRV+RL CF+ +GWSHCFASMVDFL CV Y
Sbjct: 308 ILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGWSHCFASMVDFLQGRCVFDY--- 364
Query: 179 IDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCT 238
ED G K F+EFVR ++K +A PL+ CI CT
Sbjct: 365 --------DEDQKGP---------------KRFKNFIEFVRTQYKTLAYPLKECISILCT 401
Query: 239 RIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKY 298
IPK I NF + L+SL+DS E LF + +VS++L +E + + K
Sbjct: 402 HIPKT-ILLHNFERLGCLMSLMDSLEASLFSNWVVSKKLFSTKLEEKEEVMKNNDEYKKL 460
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L K ++C VL L+ S + L LP K +ED FC + ASLF T SSS+ L+
Sbjct: 461 L--KEINDCVLVLNSLKHSLSRLKLPQTSCKRDVED----FCFENASLFFCTVSSSFKLY 514
Query: 359 SV-AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
S M PL LVIDEAAQLKE E+ IPLQ IKHA+L GDECQLPAMVESK+++EA FG
Sbjct: 515 SRRTMAPLETLVIDEAAQLKECEAAIPLQFPSIKHAILIGDECQLPAMVESKIADEAGFG 574
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLFERLS LG+ KHLL++Q+RMHPSIS FPNS FY NKI D V+ ++YEK+FLHGPM
Sbjct: 575 RSLFERLSSLGHQKHLLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPM 634
Query: 478 YGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKA-WID--SKEKLSIGIVSP 532
+G YSFI++ G+EE I S +NMVEV VV KI+ NLYKA +D SKEK+S+G+VSP
Sbjct: 635 FGSYSFIDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSP 694
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y AQV AI+E +G Y N + F+VKV S+DGFQGGE+D+IIISTVRSN SIGFLS+++
Sbjct: 695 YLAQVEAIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQ 754
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
R NVALTRAR+CLWILGN TL+ S+W LV DA R CFF A++D+DL I
Sbjct: 755 RTNVALTRARYCLWILGNFTTLSNSDSIWGELVFDAMKRSCFFQANEDRDLANVI 809
>gi|224077420|ref|XP_002305251.1| predicted protein [Populus trichocarpa]
gi|222848215|gb|EEE85762.1| predicted protein [Populus trichocarpa]
Length = 1011
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 362/803 (45%), Positives = 478/803 (59%), Gaps = 63/803 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
SS LN SQ AVLSC+ RC H+ T++L+ GPPGTGKTKT S LL LL+MK RTL C
Sbjct: 241 SSNLNSSQEAAVLSCIHTARCWHQYTVKLVQGPPGTGKTKTASCLLHALLRMKCRTLTCA 300
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE---IYLD 141
PTN+A+ E+AARVV V + VE + + +GDI+L GN ER+KVD + ++LD
Sbjct: 301 PTNIAVVEVAARVVSTVADLVEYET-----YGMGDIILFGNWERMKVDGDQNDLLHVFLD 355
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECG 201
+R L F P TGW AS++ L++ + YH Y+ + G
Sbjct: 356 HRADILEKSFDPSTGWKRILASLISLLEDSEAQYHLYL-----------------QDNMG 398
Query: 202 KEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLD 261
KE ++ +FV RF L+ CI N T +P I +M + L+
Sbjct: 399 KEGLLT------CEQFVWKRFDFSGKQLKFCIVNLYTHLPTTLISLQVMRIMTRALDLMT 452
Query: 262 SFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNEL 321
S ETLL + E L+++L + DE K IK + KR EC LR L F
Sbjct: 453 SLETLLLSLSAADEGLKQILGENEDEE-RKLHNRIKLINEKR--ECLNTLRLLSLKFQ-- 507
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
+P +K+ +E FCL A L T SSS LHS+ M PL LVIDEAAQLKE ES
Sbjct: 508 -VPEFADKNAIE----KFCLSNACLIFCTVSSSARLHSIRMAPLRCLVIDEAAQLKECES 562
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
TIPLQL G+ HA+L GDE QLPA+V S++S +A FGRSLFERL LG HLL+IQYRMH
Sbjct: 563 TIPLQLFGLHHAILIGDERQLPAIVNSEISGKAGFGRSLFERLVKLGCKSHLLNIQYRMH 622
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRN 500
PSIS FPN+ FY ++ D+ V++ Y +RFL G M+ YSFIN+ G+EEF+E S +N
Sbjct: 623 PSISLFPNTEFYGRQVLDAPNVQETGYRRRFLQGDMFESYSFINIAHGKEEFVEQRSFKN 682
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS-AGFAVKVM 559
VE + I+ L+K + +K+SIGI+SPY AQV AIQEK+G +S + F+V V
Sbjct: 683 TVEAAAAADIVGRLFKDINGTGQKVSIGIISPYQAQVHAIQEKIGKFISDSDSAFSVSVG 742
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
++DGFQGGEEDLIIISTVRSN GS+GF+SN +R NVALTRA R S
Sbjct: 743 TVDGFQGGEEDLIIISTVRSNENGSVGFVSNPQRANVALTRA--------------RSGS 788
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSE 679
+W+ +V+DA RQCF+NA++D+ L +AI E LD LL S LFR+ RW V FS+
Sbjct: 789 IWKKIVNDAKHRQCFYNAEEDESLDQAITESLIEHGRLDVLLRTHSPLFRNARWMVFFSD 848
Query: 680 NFLKSFRKLTSDPTKKSVIHLLLKLSNGWRP----KKRNVDSVCGSSLHIIKQFKVEG-F 734
+F +S ++ + K V+ LL KLSNGWR KKR++ G S +I+Q+ V G
Sbjct: 849 DFRRSVARVRNVRICKEVLSLLAKLSNGWRQHHSRKKRSLMVHSGISSPLIEQYNVSGQL 908
Query: 735 YIICTIDIVKESQY-FQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGN 793
+I T+DI++E+ + QVLKVWDILP D+PK+ LD ++ YT E +N C K +EGN
Sbjct: 909 NMIWTVDILQENSFCIQVLKVWDILPSSDIPKLAPSLDTLFRNYTEEQMNRCLYKCMEGN 968
Query: 794 LEVPKTWTATSNVVRFKNLADND 816
L VP WT S+ + D D
Sbjct: 969 LVVPMRWTVDSSSDHQGSCGDAD 991
>gi|297841151|ref|XP_002888457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334298|gb|EFH64716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1058
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 356/829 (42%), Positives = 479/829 (57%), Gaps = 59/829 (7%)
Query: 4 TCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGK 62
+C C SE V ++ L S LN SQ A+LSCL C H I+LIWGPPGTGK
Sbjct: 242 SCVACKENSENVVSDHSARMLRSFKLNSSQEDAILSCLEAKSCYHSNNIKLIWGPPGTGK 301
Query: 63 TKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
TKT S+LL+ LL+M+ RTL C PTN+A+ E+ +R+VKLV ES+ + LGDI+L
Sbjct: 302 TKTTSVLLLNLLKMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFGG-----YGLGDIVL 356
Query: 123 LGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
GN ER+K+D + +++L+YRV+ L CF +TGW M+ L + Y
Sbjct: 357 FGNKERMKIDDREDLFDVFLEYRVEELYRCFMAMTGWRANVNRMICLLSDPQREY----- 411
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
+Q +N + F EFV +R + L+ C +
Sbjct: 412 ----RQFNSVNKTSLS-----------------FKEFVEERLSRLRNDLQHQFTTLCLHL 450
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLS--HSVDEGLSKSIVGIKY 298
P + +F V + D L D VS+ + + H + K +
Sbjct: 451 PTTLL---SFRVAEKMNQTND-----LLRDISVSDVMGDGKKSCHGRRKYNRKDTGDERL 502
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
R +C L+ L S +NLP + K E LK CL A L TASSS LH
Sbjct: 503 ENDSREQDC---LKMLTSISTSINLPDFISK--FE--LKILCLDNAYLLFCTASSSAKLH 555
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ P+ LVIDEAAQLKE ES IPLQL G++HA+L GDE QLPAM++SK+++EA GR
Sbjct: 556 MSS--PIQLLVIDEAAQLKECESAIPLQLPGLQHAILIGDEKQLPAMIKSKIASEADLGR 613
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFERL LG++K LL++QYRMHPSIS FPN FY+ KI D+ +VR RSYEK+FL M+
Sbjct: 614 SLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMF 673
Query: 479 GPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV 537
GPYSFIN+ GRE+F E +S +N+VEVSVV +I+ LY + +S+G++SPY AQV
Sbjct: 674 GPYSFINIAYGREQFGEGYSSKNVVEVSVVAEIVSKLYSVSRKTGRSISVGVISPYKAQV 733
Query: 538 VAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
AIQE++G Y F V V S+DGFQGGEED+IIISTVRSN G+IGFLSN +R NVA
Sbjct: 734 FAIQERIGEMYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGKGAIGFLSNQQRTNVA 793
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDEL 657
LTRAR+CLWILGN TLT KSVW LV DA AR CF +A++DK L + I LD+L
Sbjct: 794 LTRARYCLWILGNEATLTNNKSVWRQLVVDAQARNCFHDAEEDKSLAQCIERSTTALDDL 853
Query: 658 DELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDS 717
++L N + F + WKV S FLKS K V++ L KLSNG + + D
Sbjct: 854 NKLQNKKLISFENSIWKVWLSNEFLKSLETFVDSEINKRVMNFLEKLSNG-KELLQQEDE 912
Query: 718 VCGSSLHIIKQFKV-EGFYIICTIDIVKESQY-FQVLKVWDILPLEDVPKVVARLDNIYV 775
+ S ++++Q K+ +G +I IDI K++ Y QVLK+W +LP DV + + L+ Y
Sbjct: 913 I--ESEYLLRQQKIDDGLSLIWAIDIFKKNNYHVQVLKIWQVLPSSDVSRAMEHLEKHYK 970
Query: 776 KYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLS 824
+YT I C+ +G+L VP W SN K++ ++ + S + LS
Sbjct: 971 RYTKVKIKRCRYICSQGDLVVPMRWPVDSNSCLKKDIVNDVSRSFALLS 1019
>gi|15218807|ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196304|gb|AEE34425.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1050
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 350/828 (42%), Positives = 471/828 (56%), Gaps = 65/828 (7%)
Query: 4 TCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGK 62
+C C SE V ++ L S LN SQ A+L CL C+H I+LIWGPPGTGK
Sbjct: 242 SCVSCKENSESVVSDYSARMLRSFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGK 301
Query: 63 TKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
TKT S+LL+ L+M+ RTL C PTN+A+ E+ +R+VKLV ES+ D + LGDI+L
Sbjct: 302 TKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDG-----YGLGDIVL 356
Query: 123 LGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
GN ER+K+D + +++L+YRV L CF LTGW M+ L +
Sbjct: 357 FGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSD---------P 407
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
+Q + +N ++ F +FV +R + L C +
Sbjct: 408 KHEFRQFKSVNTTLLS-----------------FKDFVEERLSRLRYDLHHQFTTLCLHL 450
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSV-DEGLSKSIVGIKYL 299
P + +F V + N + L + + V +G + +K
Sbjct: 451 PTSLL---SFRVAEKM--------------NQTNNLLRNIAASDVMRDGYGRMKYKLKDT 493
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
+ S L L S + LP + K L+ L CL A L TASSS LH
Sbjct: 494 GDENDSRTQDCLEMLTSISMSIKLPDFISKFELQKL----CLDNAYLLFCTASSSARLHM 549
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+ P+ LVIDEAAQLKE ES IPLQL G++HA+L GDE QLPAM++S +++EA GRS
Sbjct: 550 SS--PIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRS 607
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL LG++K LL++QYRMHPSIS FPN FY+ KI D+ +VR RSYEK+FL MYG
Sbjct: 608 LFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYG 667
Query: 480 PYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
PYSFIN+ GRE+F E +S +N+VEVSVV +I+ LY + +S+G++SPY AQV
Sbjct: 668 PYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVF 727
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AIQE++G KY F V V S+DGFQGGEED+IIISTVRSN G+IGFLSN +R NVAL
Sbjct: 728 AIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVAL 787
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRAR+CLWILGN TLT +SVW LV DA AR CF NA++D+ L + I LD+L+
Sbjct: 788 TRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALDDLN 847
Query: 659 ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSV 718
+L N + F + WKV S FLKS + K V+ L KLSNG K V
Sbjct: 848 KLQNKKLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSNG----KELHQEV 903
Query: 719 CGSSLHIIKQFKV-EGFYIICTIDIVK-ESQYFQVLKVWDILPLEDVPKVVARLDNIYVK 776
S ++++Q + +G +I IDI K +Q+ QVLK+W +LP DV +V L+ Y +
Sbjct: 904 EFESENLLRQHEFDDGLSLIWAIDIFKNNNQHVQVLKIWQVLPSTDVSRVTEHLEKHYRR 963
Query: 777 YTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLS 824
YT I+ C+ +G+L VP W SN K++ + + S + LS
Sbjct: 964 YTKGKISRCRYICSQGDLVVPMQWPVDSNSCSKKDIVSDVSRSFALLS 1011
>gi|449526409|ref|XP_004170206.1| PREDICTED: uncharacterized protein LOC101231716, partial [Cucumis
sativus]
Length = 804
Score = 584 bits (1505), Expect = e-163, Method: Compositional matrix adjust.
Identities = 338/659 (51%), Positives = 433/659 (65%), Gaps = 52/659 (7%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
+D +C+ C +++ + + L STLN+ QA+AV CL + C HK++I+LIWGPPGT
Sbjct: 190 LDFSCDAC--EAKVGMSFSHNDDLFSTLNEPQARAVQRCLEKTSCAHKSSIELIWGPPGT 247
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDA-LFFPLGD 119
GKTKTV++LL+ + R L C PTN AI ++A+R++ LVKE E++ LF L D
Sbjct: 248 GKTKTVAVLLLQFRKNNHRVLTCAPTNTAIMQVASRLLSLVKEMHEKEYGSGELFCNLSD 307
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDN-CVSLYHTY 178
ILL+GN RLK++ + I+LDYRV+RL CF+ +GWSHCFASMVDFL CV Y
Sbjct: 308 ILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGWSHCFASMVDFLQGRCVFDY--- 364
Query: 179 IDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCT 238
ED G K F+EF+R ++K +A PL+ CI CT
Sbjct: 365 --------DEDQKGP---------------KRFKNFIEFLRTQYKTLAYPLKECISILCT 401
Query: 239 RIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKY 298
IPK I NF + L+SL+DS E LF L EE EE++ ++ DE IK
Sbjct: 402 HIPKT-ILLHNFERLGCLMSLMDSLEASLFSIKL--EEKEEVMENN-DE--------IKD 449
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L K ++C VL L+ S + L LP K +ED FC + ASLF T SSS+ L+
Sbjct: 450 KLLKEINDCVLVLNSLKHSLSRLKLPQTSCKRDVED----FCFENASLFFCTVSSSFKLY 505
Query: 359 SV-AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
S M PL LVIDEAAQLKE E+ IPLQ IKHA+L GDECQL AMVESK+++EA FG
Sbjct: 506 SRRTMAPLETLVIDEAAQLKECEAAIPLQFPSIKHAILIGDECQLRAMVESKIADEAGFG 565
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
RSLFERLS LG+ KHLL++Q+RMHPSIS FPNS FY NKI D V+ ++YEK+FLHGPM
Sbjct: 566 RSLFERLSSLGHQKHLLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPM 625
Query: 478 YGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKA-WID--SKEKLSIGIVSP 532
+G YSFI++ G+EE I S +NMVEV VV KI+ NLYKA +D SKEK+S+G+VSP
Sbjct: 626 FGSYSFIDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSP 685
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y AQV AI+E +G Y N + F+VKV S+DGFQGGE+D+IIISTVRSN SIGFLS+++
Sbjct: 686 YLAQVEAIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQ 745
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK 651
R NVALTRAR+CLWILGN TL+ S+W LV DA R CFF A++D+DL + + K
Sbjct: 746 RTNVALTRARYCLWILGNFTTLSNSDSIWGELVFDAMKRSCFFQANEDRDLANVMSSWK 804
>gi|255570463|ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
gi|223534494|gb|EEF36194.1| ATP binding protein, putative [Ricinus communis]
Length = 782
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 345/754 (45%), Positives = 437/754 (57%), Gaps = 86/754 (11%)
Query: 129 LKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID------ 180
+K+D+ E +I+LD R L+ CFAP +GW H ASM+ L+N Y Y+
Sbjct: 1 MKIDNQSELFDIFLDNRADTLSSCFAPKSGWKHSLASMICLLENPQEQYRMYLQEDRTEK 60
Query: 181 --------------------------------------------NESMKQSEDINGDIIK 196
E K S I D K
Sbjct: 61 DKEDKKVEKEQQMINQKKGEENYNGNRKGKKKKNGKKVIVKEMKKEEQKASLHIQKD--K 118
Query: 197 EKECGKEAD---------------VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIP 241
+K GKE + V+ E+ EFV RFK I L+ CI N T +P
Sbjct: 119 QKLKGKEHEGGDGYFKNKKTEQEVVAKCEVMTLEEFVEKRFKTIGERLKFCIVNLYTHLP 178
Query: 242 KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLH 301
I + M + LL S ETLL N+ + +++L +DE + SI L
Sbjct: 179 TSSISLELVRNMIGALGLLASLETLLNSVNIAKQGFKQVL--GIDEN-AGSITSSHMKLS 235
Query: 302 KRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA 361
R EC +L+ L +F + S +K FCL A L T SSS LH+
Sbjct: 236 MTRKECLSILKSLPPTFPVPDFTSTFA-------IKEFCLANACLLFCTTSSSIKLHTKR 288
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
M PL FLVIDEAAQLKE ESTIPLQLSG+ HA+L GDE QL AMV SK+S EA FGRSLF
Sbjct: 289 MTPLRFLVIDEAAQLKECESTIPLQLSGLHHAILVGDERQLSAMVNSKISEEAGFGRSLF 348
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
ERL LGY KHLL+IQYRMHPSIS PN FY +I D+ V++ S+E+RFL G MY Y
Sbjct: 349 ERLVKLGYKKHLLNIQYRMHPSISLLPNREFYGKQILDALNVKEISHERRFLEGNMYSSY 408
Query: 482 SFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
SFIN+ G+EEF E S RNMVEV+VV I+ NL+ +I +K+K+SIGI+SPY AQV AI
Sbjct: 409 SFINISHGKEEFDEFRSLRNMVEVAVVSDIVANLFSEFISTKKKVSIGIISPYKAQVHAI 468
Query: 541 QEKLGSKYVNS-AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
QEK+G+ S A F+V V SIDGFQGGEED+II STVR NN GS+GFLSN +R NVALT
Sbjct: 469 QEKIGNYSSGSDAEFSVNVRSIDGFQGGEEDVIIFSTVRCNNKGSVGFLSNCQRANVALT 528
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RAR+CLWILGNA TL + S+W+ LV DA R+CF NAD+D L +AI+A ELD+LD
Sbjct: 529 RARYCLWILGNAATLNKSGSIWKKLVADAERRRCFHNADEDNRLAQAIIAALIELDQLDT 588
Query: 660 LLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVC 719
LL S LFR RWKV FS++F +S +L +K VI LL KLSNGWR ++ D +
Sbjct: 589 LLQATSPLFRKARWKVFFSDDFQRSMERLKDVEIRKKVISLLEKLSNGWRQSDKDNDQIV 648
Query: 720 --GSSLHIIKQFKV-EGFYIICTIDIVKESQY-FQVLKVWDILPLEDVPKVVARLDNIYV 775
G S +++Q+KV E I+ ++DI++E+ + QVLK+WD+L V K+ LDN++
Sbjct: 649 HDGISFQLLQQYKVNEQLNIVWSVDILQENSFQIQVLKIWDVLSSSHVAKLAESLDNLFR 708
Query: 776 KYTAEFINHCKEKSIEGNLEVPKTWTA-TSNVVR 808
KYT + IN CK K E NL VP W +SNV R
Sbjct: 709 KYTIDKINCCKYKCFERNLVVPMRWPVNSSNVHR 742
>gi|356569406|ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max]
Length = 1054
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 346/814 (42%), Positives = 482/814 (59%), Gaps = 103/814 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN +Q + VLSCL C HK T++LIWGPPGTGKTKTV+ LL LL+ K RTL C PTN
Sbjct: 241 LNKAQEEGVLSCLAARECSHKNTVKLIWGPPGTGKTKTVASLLFALLKKKCRTLTCAPTN 300
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD--YRVK 145
VA+ E+ +R ++LV ES+ D + LGDILL GN +R+ +D + + + YR
Sbjct: 301 VAVLEVTSRFLRLVTESI-----DYHTYGLGDILLFGNRKRMSIDDRDDLLDIFLDYRAN 355
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI-------------------------- 179
LA CFAPL+GW H ++ L+N Y Y+
Sbjct: 356 ILAKCFAPLSGWKHHLEQVILLLENPEEQYREYLKCEEKRDYEIDDDDDCLKEENELHAI 415
Query: 180 --------------DNESMKQSE---DINGDIIKEKECGKEADVSD-------------- 208
D++ KQ+E IN + + + C KEA+ S
Sbjct: 416 ASQQTKQEKKHMSKDSKICKQNEWMKIINKTLRENRLCFKEANKSKYDKQEKKDFLFREN 475
Query: 209 -VEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLL 267
++I F EFV + I +R+ + CT +P +I + + LL +L
Sbjct: 476 KIQILTFHEFVNKKLNYIWRWMRTFAVDMCTHLPTSFISLRQVKCLFECLDLLKVLAEML 535
Query: 268 FEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAV 327
+++ ++L +K R EC L+ LQ ++ LP
Sbjct: 536 SNNSITDQQL-----------------------YKARKECLTKLKSLQ----KIILPDFF 568
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
+ E +K+FC+KR+ + TASSS LH+V L LVIDEAAQLKE ES IPLQL
Sbjct: 569 D----EYTIKNFCIKRSRMIFCTASSSARLHAVEHYRLEMLVIDEAAQLKECESNIPLQL 624
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCF 447
G++H VL GDE QLPA+V+S++S +A FGRSLFERL LG+ KHLL++QYRMHPSIS F
Sbjct: 625 PGLRHVVLIGDEKQLPALVKSEISGKAGFGRSLFERLVLLGHEKHLLNVQYRMHPSISLF 684
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR-NMVEVSV 506
PN FY+ +I DS +V++RS+EK FLHG M+ YSFINV G++EF E + R NMVEV+V
Sbjct: 685 PNMEFYDKQILDSPSVKERSHEKHFLHGDMFKFYSFINVAYGQDEFDEGNSRKNMVEVAV 744
Query: 507 VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGF 564
V +I+LNLYK K+ +S+G++SPY AQV+AIQ+ LG ++V + F++KV ++DGF
Sbjct: 745 VSEIVLNLYKESASRKQTVSVGVISPYKAQVLAIQDALGKRFVGNVDNDFSLKVSTVDGF 804
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QGGEED+IIISTVR NN G +GFLSN +R NVALTRAR+CLWI+GN+ TL SVWE L
Sbjct: 805 QGGEEDVIIISTVRYNNMGYVGFLSNFQRTNVALTRARYCLWIVGNSETLMNSGSVWERL 864
Query: 625 VHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKS 684
+ DA AR C+ NAD+D+ L AI EL ++ +LL +S LF+ +WKV +++FL S
Sbjct: 865 ILDARARGCYHNADEDERLSDAIATSVIELGQVSDLLKLDSLLFKKAKWKVCLNQSFLIS 924
Query: 685 FRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVD--SVCGSSLHIIKQFKV-EGFYIICTID 741
++ S K + LL++LS+GWR RN++ + +S ++ +KV E Y+ TID
Sbjct: 925 MARIKSAEICKKICSLLMQLSSGWRQPHRNINIRVLDDTSSQQLELYKVNESLYLAWTID 984
Query: 742 IVKE-SQYFQVLKVWDILPLEDVPKVVARLDNIY 774
+++E S Y QVLK+WD+LPL +V +V +D Y
Sbjct: 985 VLEENSNYVQVLKIWDVLPLSEVSNLVRDVDISY 1018
>gi|225462691|ref|XP_002267110.1| PREDICTED: uncharacterized protein LOC100257019 [Vitis vinifera]
Length = 1143
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 363/838 (43%), Positives = 485/838 (57%), Gaps = 75/838 (8%)
Query: 5 CELCSMQSEGVWNET--------FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWG 56
C LCS SE + T FG LN SQ +AVLSC+ C H+ +++LI G
Sbjct: 335 CALCSSGSEAFKSVTDLEDRIRSFG------LNLSQEEAVLSCISAAMCHHENSVKLIKG 388
Query: 57 PPGTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP 116
PPGTGKTKTV+ LL +L+MK RTL C PTN A+ R++ VK S+E +
Sbjct: 389 PPGTGKTKTVASLLFAVLKMKCRTLACAPTNTAVLLATERLLSFVKGSLENGT-----YG 443
Query: 117 LGDILLLGNNERLKVDSGVEE---IYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVS 173
+GDI+L G+ +++D +E I+LD R LA CFA +GW H SM+ L N
Sbjct: 444 MGDIVLFGSTRGMQIDDCDDELHDIFLDSRANILARCFAQGSGWKHSLESMITLLQNLEG 503
Query: 174 LYHTYIDN-------ESMKQSEDINGDIIKEKECGKEADVSDVEIKPF-----------L 215
Y+ + N E KQ + G I EKE E D + + F
Sbjct: 504 NYNLCLGNREDEGNEEQGKQGKLGKGIFIDEKE---EIDKKNFQSLKFSGGECDDFFISQ 560
Query: 216 EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSE 275
+FV +RF + L+ N T +P I D M ++LL + LL
Sbjct: 561 DFV-ERFDLVHGQLKVYTVNLYTHLPTSMIPLDVMKNMVRALNLLKNLSDLL-------H 612
Query: 276 ELEELLSHSVDEGLSKSIVGIKYLLHKRRSE-CHFVLRKLQSSFNELNLPSAVEKDLLED 334
+EE L D+G K I + L +RR+E C LR L F+ L + E
Sbjct: 613 SIEEDLDKFEDKG--KRIRRLPDL--QRRTEVCLQTLRSLGKMFSVPTLAN-------EY 661
Query: 335 LLKSFCLKRASL-FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+KS CLK A L F + +SSS +LH M+ + LVIDEAAQLKE ESTIPLQ+SGI+HA
Sbjct: 662 KIKSLCLKNAVLIFCTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHA 721
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
VL GDE QLPA+V+SK F RSLFERL L + KHLL +QYRMHPSIS FPN+ FY
Sbjct: 722 VLVGDEMQLPALVKSKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFY 781
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG---REEF-IEHSCRNMVEVSVVMK 509
E I ++ V++ Y +RFLHG MYGP+SFINV EEF + HS +NMVEV+VV +
Sbjct: 782 EGDIINAPKVKEAIYSRRFLHGNMYGPFSFINVASTVPELEEFNVRHSSKNMVEVAVVSQ 841
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGG 567
I+ +L++ KEK+S+GI+SPY AQV IQ+KLG Y A F++KV ++DGFQG
Sbjct: 842 IIASLFEETKARKEKVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQGD 901
Query: 568 EEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
EED+IIISTVR N+GG IGF+ N +R NV+LTRARHCLWI GNA+TL SVWE +V
Sbjct: 902 EEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRARHCLWITGNAKTLEDSHSVWEKVVQH 961
Query: 628 ANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRK 687
A ++CF+NA +D +L KA++ E LD + S+LFR+ RWKV F + F +S K
Sbjct: 962 AKGQRCFYNAYEDTNLAKALIVCFLERYHLDGVHYMASQLFRNTRWKVFFDDKFWESMAK 1021
Query: 688 LTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKE-S 746
+ + K V+ LL KLS+GWRPK RN ++ G+ H+++ F+++ +DIV+E S
Sbjct: 1022 IMNTAVHKEVLSLLEKLSSGWRPKVRNPYAINGT--HLMQYIIKRQFHLLWAVDIVEENS 1079
Query: 747 QYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATS 804
Y QVLKV++I+P + V L + K+T + IN CK S +G E P W S
Sbjct: 1080 CYIQVLKVYNIVPSHETTGVTRDLCASFEKFTIDHINRCKYTSGQG--EAPMIWQMPS 1135
>gi|6686402|gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
Length = 1075
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 350/853 (41%), Positives = 472/853 (55%), Gaps = 90/853 (10%)
Query: 4 TCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGK 62
+C C SE V ++ L S LN SQ A+L CL C+H I+LIWGPPGTGK
Sbjct: 242 SCVSCKENSESVVSDYSARMLRSFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGK 301
Query: 63 TKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
TKT S+LL+ L+M+ RTL C PTN+A+ E+ +R+VKLV ES+ D + LGDI+L
Sbjct: 302 TKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDG-----YGLGDIVL 356
Query: 123 LGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
GN ER+K+D + +++L+YRV L CF LTGW M+ L +
Sbjct: 357 FGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSD---------P 407
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
+Q + +N ++ F +FV +R + L C +
Sbjct: 408 KHEFRQFKSVNTTLLS-----------------FKDFVEERLSRLRYDLHHQFTTLCLHL 450
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSV-DEGLSKSIVGIKYL 299
P + +F V + N + L + + V +G + +K
Sbjct: 451 PTSLL---SFRVAEKM--------------NQTNNLLRNIAASDVMRDGYGRMKYKLKDT 493
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
+ S L L S + LP + K L+ L CL A L TASSS LH
Sbjct: 494 GDENDSRTQDCLEMLTSISMSIKLPDFISKFELQKL----CLDNAYLLFCTASSSARLHM 549
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES----------- 408
+ P+ LVIDEAAQLKE ES IPLQL G++HA+L GDE QLPAM++S
Sbjct: 550 SS--PIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNVGSLILTNYT 607
Query: 409 --------------KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
++++EA GRSLFERL LG++K LL++QYRMHPSIS FPN FY+
Sbjct: 608 HIHSLLFAYLISYVQIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYD 667
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLN 513
KI D+ +VR RSYEK+FL MYGPYSFIN+ GRE+F E +S +N+VEVSVV +I+
Sbjct: 668 MKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSK 727
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
LY + +S+G++SPY AQV AIQE++G KY F V V S+DGFQGGEED+II
Sbjct: 728 LYSVSRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIII 787
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
ISTVRSN G+IGFLSN +R NVALTRAR+CLWILGN TLT +SVW LV DA AR C
Sbjct: 788 ISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNC 847
Query: 634 FFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPT 693
F NA++D+ L + I LD+L++L N + F + WKV S FLKS +
Sbjct: 848 FHNAEEDESLAQCIERSTTALDDLNKLQNKKLISFENSIWKVWLSYEFLKSLETIVDSEI 907
Query: 694 KKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKV-EGFYIICTIDIVK-ESQYFQV 751
K V+ L KLSNG K V S ++++Q + +G +I IDI K +Q+ QV
Sbjct: 908 NKRVMSFLEKLSNG----KELHQEVEFESENLLRQHEFDDGLSLIWAIDIFKNNNQHVQV 963
Query: 752 LKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKN 811
LK+W +LP DV +V L+ Y +YT I+ C+ +G+L VP W SN K+
Sbjct: 964 LKIWQVLPSTDVSRVTEHLEKHYRRYTKGKISRCRYICSQGDLVVPMQWPVDSNSCSKKD 1023
Query: 812 LADNDNNSGSDLS 824
+ + + S + LS
Sbjct: 1024 IVSDVSRSFALLS 1036
>gi|302761080|ref|XP_002963962.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
gi|300167691|gb|EFJ34295.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
Length = 2806
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 358/1022 (35%), Positives = 543/1022 (53%), Gaps = 106/1022 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ +AV + ++ + K ++LI GPPGTGKT + L+ +L R L+ PTN
Sbjct: 386 LNDSQMEAVSRTVIALKREQKPYVRLIQGPPGTGKTSMLMALISVLAGSSKRILMSAPTN 445
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDYRVK 145
AI E+ R+ + + D++L+GN E L+VD ++ ++L R +
Sbjct: 446 AAITEVVVRLFTSITKQPSPFIGCTRTVCPRDVVLVGNKENLEVDDNEILDAVFLQSREE 505
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
RLA A GW S+VDFL+N Y Y K+
Sbjct: 506 RLATVLATACGWQQKVLSVVDFLENAEERYRQY-----------------------KQDK 542
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFET 265
D + FL+F R+R + + S I C +P ++ + ++ +++
Sbjct: 543 KPDEPAESFLDFSRERMTFLGDQMLSSIDLVCNDLPSTFLKSTDILGARHHVTEINAAFG 602
Query: 266 LLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPS 325
ED+ E+L++ +S + LL+ ++ FV ++ +P+
Sbjct: 603 RFREDS-------EVLNY-----VSSTSGAAAALLNLLKTNMDFV------TYPPGKIPT 644
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFL--VIDEAAQLKESESTI 383
E L+ AS+ T SS+ V +F VIDEA QL E+E+ I
Sbjct: 645 GEE-----------LLRHASVVCCTVSSAGT-RIVQNTSRHFYTAVIDEAGQLVEAETAI 692
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPS 443
+ L +K VL GD QLPA V SK++ + +GRSLFERL LG+ +L++QYRMHPS
Sbjct: 693 VMGLQNLKQLVLVGDHKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPS 752
Query: 444 ISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVE 503
IS FPN FYE I D V Y + ++GPY+F+NV G + +HS N VE
Sbjct: 753 ISQFPNFQFYEGAICDGPNVVDDFY-GQLSQSQLFGPYTFLNVHGVETKDEKHSKSNAVE 811
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDG 563
V VVM +L L++ S EKL +GI+SPY+AQV AI ++L K + ++ S+DG
Sbjct: 812 VLVVMHLLKMLHQ----SGEKLQVGIISPYAAQVKAINDRL--KSWDHGSLSINCRSVDG 865
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
FQG E+D+II+STVRSN GG +GFL + +R+NVA+TRARH L I+GNA TL VW
Sbjct: 866 FQGREKDVIILSTVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGNANTLESSDGVWRQ 925
Query: 624 LVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLK 683
L++DA R+C+ A D + + I E+ +L+ L++P S F + WKV FS+ F
Sbjct: 926 LLNDARHRKCYREASQDSTVKRTIQRAMAEIHQLESLVDPRSDFFSNNVWKVFFSKEFKA 985
Query: 684 SFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIV 743
SF ++S TK V++ +L L+NG RP+ V ++ +E Y++ T+D+
Sbjct: 986 SFTSISSGSTKLHVLNAILNLANGRRPRHAFTAPVPTKRNYVQFHLTME-MYLVWTVDLD 1044
Query: 744 KESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTAT 803
+ QVLK WD+L L+ +P++V+RL+N+ Y+ ++ E+ +G + VP W++
Sbjct: 1045 ADCT-VQVLKFWDVLKLDGLPRIVSRLENLCATYSGPYLRRSSERLTDGKVAVPARWSSG 1103
Query: 804 SNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESLSLMKFYRLSSVVVSHLLSDR 863
+ + R K+L + + S+ +G ENS+VSESL LMKFY LS+ + LL+
Sbjct: 1104 AEIERHKSLKE---IASSEANGET----TTGENSSVSESLLLMKFYSLSTGIARQLLTAT 1156
Query: 864 VGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLTRKLFQKEELHRMAMEEFYGV 923
G ++D PFEVTD++ +++ P S+F++GRSGTGKTTV+T KL +E+ R++
Sbjct: 1157 DGSQIDPPFEVTDQESQVVKFPWSSFVVGRSGTGKTTVITMKLLNREQQFRLS------- 1209
Query: 924 NNSVTLHCSQESEAEEGLGETERP---ILRQLFVTVSPKLCFAIKQHISQMKSS-----A 975
GL E E P ++RQ +TVS KLC AIK H+ + + S A
Sbjct: 1210 ---------------HGLAEGESPGQTVVRQALITVSSKLCAAIKFHLQRTRRSLQRNNA 1254
Query: 976 FGGKFVAESSLIDIDDEAE---FKDIPNSFADIPAESYPLVITFHKFLMMLDGTLGSSYF 1032
+ E + +D+EAE F DIP+SF DI ++ PLVIT+ KFL MLDG++ +
Sbjct: 1255 VNKDDMYEREGLMLDEEAEEKLFSDIPDSFVDISPQALPLVITYRKFLTMLDGSVPRPFI 1314
Query: 1033 DR 1034
R
Sbjct: 1315 AR 1316
>gi|359490548|ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
Length = 1115
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 307/634 (48%), Positives = 396/634 (62%), Gaps = 18/634 (2%)
Query: 180 DNESMKQSEDINGDIIKEKECGKE-ADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCT 238
+N+ +K + N D + +K+ K A + + F EFV+ R L+ CI N T
Sbjct: 462 ENDQLKDDKGENEDELAQKKNNKMVASGKNDGLLTFQEFVKKRIDSTGEKLKFCIINLYT 521
Query: 239 RIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKY 298
+P +I + M + LL+S TLL + + L+E + D G + V
Sbjct: 522 HLPTSFISIEVAKNMIKALGLLESIATLLHSSTVSFKRLKENICEFEDVGKA---VDQFS 578
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
LH+ R EC +L+ L + LP V L D +K+FCL ASL TASSS LH
Sbjct: 579 KLHRNRQECLQILKCLHQT-----LP--VPTIFLYDEIKNFCLCNASLIFCTASSSAKLH 631
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
M+P LVIDEAAQLKE ES IPLQL+G++HA+L GDE QLPAMV+SK+S A FGR
Sbjct: 632 MAGMKPFELLVIDEAAQLKECESAIPLQLAGLRHAILVGDELQLPAMVKSKISTSAEFGR 691
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFERL LG+ KHLL++QYRMHPSIS FPN FY NKI D+ V++RSY++ FL G MY
Sbjct: 692 SLFERLVSLGHRKHLLNLQYRMHPSISLFPNQEFYNNKISDAPNVKERSYKRCFLQGDMY 751
Query: 479 GPYSFINV-FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV 537
G YSFINV +G E+ HS RNMVEV V +I+ L+K + +K+K+S+G++SPY+AQV
Sbjct: 752 GSYSFINVAYGNEEQSNSHSTRNMVEVVAVSEIVAKLFKESVANKQKVSVGVISPYNAQV 811
Query: 538 VAIQEKLGSKYVNS--AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
AIQEKLG Y S + F+V V S+DGFQGGEED+IIISTVRSN G +GFLSN +R N
Sbjct: 812 FAIQEKLGKTYSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLNGKVGFLSNRQRAN 871
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELD 655
VALTRARHCLWILGN TL ++W LV +A AR CF+NA+DDK+L +AI E
Sbjct: 872 VALTRARHCLWILGNGPTLANSGTIWTKLVSNAKARGCFYNAEDDKNLAQAIATSLVEHG 931
Query: 656 ELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWR-PKKRN 714
L N +S LFR RWKV FS++F KS K+ K V+ LL KLS+GWR P
Sbjct: 932 YFHLLQNMDSLLFREARWKVCFSDDFWKSLAKIKRTEINKEVLRLLEKLSSGWRSPNNEK 991
Query: 715 V-DSVCGSSLHIIKQFKVEGFY-IICTIDIVKE-SQYFQVLKVWDILPLEDVPKVVARLD 771
+ +++ G+ + +Q+KV G ++ T DI KE S QVLKVWDILP + K+ RL+
Sbjct: 992 IPNAITGTCSELFQQYKVNGLLDLVWTTDIFKENSNCTQVLKVWDILPRSETSKLARRLE 1051
Query: 772 NIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSN 805
+ YT +N CK K IEGNLEVP W N
Sbjct: 1052 TLLGNYTVNDMNRCKVKCIEGNLEVPMRWPGNMN 1085
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 117/181 (64%), Gaps = 10/181 (5%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
+ TC LC VW+ P LNDSQ AV SC+ +CDH+ +++LIWGPPGT
Sbjct: 212 AENTCTLCFSNPASVWDPITCPF---NLNDSQQAAVSSCIAARKCDHQNSVKLIWGPPGT 268
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTV LL +L +MK RT+ C PTN+A+ E+ R+V+LV+ES+E C + LGDI
Sbjct: 269 GKTKTVGTLLFVLFRMKCRTVTCAPTNIAVIEVTTRLVRLVRESIE--CGS---YGLGDI 323
Query: 121 LLLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTY 178
+L GN ER+K+D + +++L++R+ LA CFAPL+GW H SM+ L++ +Y Y
Sbjct: 324 VLFGNGERMKIDKHDDLLDVFLNFRINILARCFAPLSGWKHSIESMISLLEDPEEMYDKY 383
Query: 179 I 179
+
Sbjct: 384 L 384
>gi|334183665|ref|NP_001185324.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196305|gb|AEE34426.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1016
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 335/826 (40%), Positives = 453/826 (54%), Gaps = 95/826 (11%)
Query: 4 TCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGK 62
+C C SE V ++ L S LN SQ A+L CL C+H I+LIWGPPGTGK
Sbjct: 242 SCVSCKENSESVVSDYSARMLRSFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGK 301
Query: 63 TKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
TKT S+LL+ L+M+ RTL C PTN+A+ E+ +R+VKLV ES+ D + LGDI+L
Sbjct: 302 TKTTSVLLLNFLKMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDG-----YGLGDIVL 356
Query: 123 LGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
GN ER+K+D + +++L+YRV L CF LTGW M+ L +
Sbjct: 357 FGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSD---------P 407
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
+Q + +N ++ F +FV +R + L C +
Sbjct: 408 KHEFRQFKSVNTTLLS-----------------FKDFVEERLSRLRYDLHHQFTTLCLHL 450
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSV-DEGLSKSIVGIKYL 299
P + +F V + N + L + + V +G + +K
Sbjct: 451 PTSLL---SFRVAEKM--------------NQTNNLLRNIAASDVMRDGYGRMKYKLKDT 493
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
+ S L L S + LP + K L+ L CL A L TASSS LH
Sbjct: 494 GDENDSRTQDCLEMLTSISMSIKLPDFISKFELQKL----CLDNAYLLFCTASSSARLHM 549
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+ P+ LVIDEAAQLKE ES IPLQL G++HA+L GDE QLPAM++S +++EA GRS
Sbjct: 550 SS--PIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRS 607
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL LG++K LL++QYRMHPSIS FPN FY+ KI D+ +VR RSYEK+FL MYG
Sbjct: 608 LFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYG 667
Query: 480 PYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
PYSFIN+ GRE+F E +S +N+VEVSVV +I+ LY + +S+G++SPY AQV
Sbjct: 668 PYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVF 727
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AIQE++G KY F V V S+DGFQGGEED+IIISTVRSN G+IGFLSN +R NVAL
Sbjct: 728 AIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVAL 787
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRAR+CLWILGN TLT +SVW LV DA AR CF NA++D+ L + I LD+L+
Sbjct: 788 TRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALDDLN 847
Query: 659 ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSV 718
+L N + F + WKV S FLKS + K V+ L KLSN
Sbjct: 848 KLQNKKLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSN------------ 895
Query: 719 CGSSLHIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYT 778
G LH +F+ E +++++ ++ LK L+ Y +YT
Sbjct: 896 -GKELHQEVEFESE--------NLLRQHEFDDGLK---------------HLEKHYRRYT 931
Query: 779 AEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLS 824
I+ C+ +G+L VP W SN K++ + + S + LS
Sbjct: 932 KGKISRCRYICSQGDLVVPMQWPVDSNSCSKKDIVSDVSRSFALLS 977
>gi|302769075|ref|XP_002967957.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
gi|300164695|gb|EFJ31304.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
Length = 2870
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 359/1043 (34%), Positives = 544/1043 (52%), Gaps = 130/1043 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ +AV + ++ + K ++LI GPPGTGKT + L+ +L R L+ PTN
Sbjct: 386 LNDSQMEAVSRTVIALKREQKPYVRLIQGPPGTGKTSMLIALISVLAGSSKRILMSAPTN 445
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDYRVK 145
AI E+ R+ + + D++L+GN E L+VD ++ ++L R +
Sbjct: 446 AAITEVVVRLFTSITKQPSSFIGCTRTVCPRDVVLVGNKENLQVDDNEILDAVFLQSREE 505
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
RLA A GW S+VDFL+N Y Y K+
Sbjct: 506 RLATVLATACGWQQKVLSVVDFLENAEERYRQY-----------------------KQDK 542
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFET 265
D + FL+F R+R + + S I C +P ++ + ++ +++
Sbjct: 543 KPDEPAESFLDFSRERMTFLGDQMLSSIDLVCNDLPSTFLKSTDILGARHHVTEINAAFG 602
Query: 266 LLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPS 325
ED+ E+L++ +S + LL+ ++ FV ++ +P+
Sbjct: 603 RFREDS-------EVLNY-----VSSTSGAAAALLNLLKTNMDFV------TYPPGKIPT 644
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFL--VIDEAAQLKESESTI 383
E L+ AS+ T SS+ M V +F VIDEA QL E+E+ I
Sbjct: 645 GEE-----------LLRHASVVCCTVSSAGM-RIVQNTSRHFYTAVIDEAGQLVEAETAI 692
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPS 443
+ L +K VL GD QLPA V SK++ + +GRSLFERL LG+ +L++QYRMHPS
Sbjct: 693 VMGLQNVKQLVLVGDHKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPS 752
Query: 444 ISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVE 503
IS FPN FYE I D V Y + ++GPY+F+NV G + +HS N VE
Sbjct: 753 ISQFPNFQFYEGAICDGPNVVDDFY-GQLSQSQLFGPYTFLNVHGVETKDEKHSKSNAVE 811
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDG 563
V VVM +L L++ S EKL +GI+SPY+AQV AI ++L K + ++ S+DG
Sbjct: 812 VLVVMHLLKMLHQ----SGEKLEVGIISPYAAQVKAINDRL--KSWDHGSLSINCRSVDG 865
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
FQG E+D+II+STVRSN GG +GFL + +R+NVA+TRARH L I+G+A TL VW
Sbjct: 866 FQGREKDVIILSTVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGSANTLESSDGVWRQ 925
Query: 624 LVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLK 683
L++DA R+C+ A D + + I E+ +L+ L++P S F + WKV FS+ F
Sbjct: 926 LLNDARHRKCYREASQDSTVKRTIQRAMAEIHQLESLVDPRSDFFSNNVWKVFFSKEFKV 985
Query: 684 SFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIV 743
SF ++S TK V++ +L L+NG RP+ V ++ +E Y++ T+D+
Sbjct: 986 SFTSISSGSTKLHVLNAILNLANGRRPRHAFTAPVPTKRNYVQFHLTME-MYLVWTVDLD 1044
Query: 744 KESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEG----------- 792
+ QVLK WD L L+ +P++V+RL+N+ Y+ ++ E+ +G
Sbjct: 1045 ADCT-VQVLKFWDFLKLDGLPRIVSRLENLCATYSGAYLRRSSERLTDGYICPNFSILKG 1103
Query: 793 -------NLEVPKTWTATSNVVR---FKNLADNDNNSGSDLSGAAFDSRNYAENSNVSES 842
L VP W++ + + R FK +A ++ N + ENS+VSES
Sbjct: 1104 LTVSFCRKLAVPARWSSGAEIARHKSFKEIASSEAN----------EETTTGENSSVSES 1153
Query: 843 LSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVL 902
L LMKFY LS+ + LL+ G ++D PFEVTD++ +++ P S+F++GRSGTGKTT++
Sbjct: 1154 LLLMKFYSLSTGIARQLLTATDGSQIDPPFEVTDQESQVVKFPWSSFVVGRSGTGKTTII 1213
Query: 903 TRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERP---ILRQLFVTVSPK 959
T KL +E+ R++ GL E E P ++RQ +TVS K
Sbjct: 1214 TMKLLNREQQFRLS----------------------HGLAEGESPAQTVVRQALITVSSK 1251
Query: 960 LCFAIKQHI-----SQMKSSAFGGKFVAESSLIDIDDEAE---FKDIPNSFADIPAESYP 1011
LC AIK H+ S +S+A + E + +D+EAE F DIP+SF DI +++P
Sbjct: 1252 LCAAIKLHLQRTRRSLQRSNAVNKDDMYERKGLLLDEEAEEKLFSDIPDSFVDISPQAFP 1311
Query: 1012 LVITFHKFLMMLDGTLGSSYFDR 1034
LVIT+ KFL MLDG++ + R
Sbjct: 1312 LVITYRKFLTMLDGSVPRPFIAR 1334
>gi|449445397|ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 770
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/682 (45%), Positives = 423/682 (62%), Gaps = 88/682 (12%)
Query: 2 DETCELCSMQSEGVWNETFGPSL---SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
++TC+ C+ Q++G + +L S +LN+SQ A+ SC+R+++C HK +I+LIWGPP
Sbjct: 148 NKTCKQCNNQTDGEDSTEDMATLRLASLSLNESQRVAIESCIRKVKCQHKPSIELIWGPP 207
Query: 59 GTGKTKTVSMLL--VILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP 116
GTGKTKT S+LL ++ + + RTL C PTNVAI LA++V+KL+K + R+A+F P
Sbjct: 208 GTGKTKTTSILLWKILAINHQIRTLACAPTNVAITNLASQVLKLLKH--DSLSRNAIFCP 265
Query: 117 LGDILLLGNNERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSL 174
LG++LL GN +RLK D +E+IYLD RV++L C G +SM+
Sbjct: 266 LGELLLFGNKDRLKFDYSHQLEDIYLDRRVEKLFKCLGQY-GLKFQISSMIG-------- 316
Query: 175 YHTYIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIF 234
I +E + K ++ FK + L C+
Sbjct: 317 -------------------IFQENKLSK---------------LKRMFKSNVSSLLECVH 342
Query: 235 NFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIV 294
F T IP+ I + N+ + L+ + TLL ++N ++ D+ + ++++
Sbjct: 343 IFTTHIPQQVIMEHNWKKLEILVGFICDIGTLLSKNNY---------NYDDDDTMGEALI 393
Query: 295 GIKYLLHKRRSECHF--VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS 352
+K CHF VLR L S +E+ +PS + K+ +E FC ++ASL ST S
Sbjct: 394 DLK---------CHFLLVLRTLLVSLDEIEVPSKLSKNSIE----KFCFQKASLIFSTTS 440
Query: 353 SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+S+ L+SV LN +V+DEAAQLKE ES IPLQL I HA+L GDE QLPA V+SKV
Sbjct: 441 NSFKLNSVKKNSLNLVVVDEAAQLKECESLIPLQLPHISHAILVGDEFQLPATVKSKVCE 500
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
A FGRSL+ERLS +GYSKHLL QYRMHP +S FPNS FY NKI D+S V + YEK +
Sbjct: 501 RAKFGRSLYERLSLIGYSKHLLDTQYRMHPLVSYFPNSKFYGNKIMDASIVMNKEYEKEY 560
Query: 473 LHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIV 530
L P++GPYSFINV GG EE S +NMVEV+VV +I+ LYKAW +K+ +SIGI+
Sbjct: 561 LPSPLFGPYSFINVCGGEEESNGDGQSKKNMVEVTVVTQIIQMLYKAWCKNKKDISIGII 620
Query: 531 SPYSAQVVAIQEKLGSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
SPY+AQV +IQEKLG KY N+ GF VKV SIDGFQGGEED+IIISTVRSNNG +IGFL
Sbjct: 621 SPYNAQVSSIQEKLGRKYEKKNNEGFGVKVKSIDGFQGGEEDVIIISTVRSNNGHNIGFL 680
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAIL 648
SN +R NVALTRAR CLWI+G+A+TL + S W ++ DA R+CFFN +++K+L +
Sbjct: 681 SNKQRTNVALTRARFCLWIVGDAKTLGKSNSEWRDVIDDAKTRRCFFNVEENKELANEMR 740
Query: 649 A--------VKKELDELDELLN 662
+K+E+ +LD + N
Sbjct: 741 MMKTWQMSDIKQEILKLDNIYN 762
>gi|15218803|ref|NP_176754.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196301|gb|AEE34422.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1065
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 328/812 (40%), Positives = 469/812 (57%), Gaps = 63/812 (7%)
Query: 17 NETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
++ P LN SQ A+L+CL RC H T++LIWGPPGTGKTKT S+LL LL
Sbjct: 227 SDGLAPRRFLKLNPSQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNA 286
Query: 77 KFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--G 134
K RTL C PTNV++ E+A+RV+KLV S++ + LGD++L GN+ER+K+
Sbjct: 287 KCRTLTCGPTNVSVLEVASRVLKLVSGSLKIGN-----YGLGDVVLFGNDERMKIKDRKD 341
Query: 135 VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN----ESMKQSEDI 190
+ I++D RV +L CF P GW M+ L++ Y+ Y++N ++K+ +
Sbjct: 342 LVNIFIDERVDKLYPCFMPFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKD-- 399
Query: 191 NGDIIKEKECGKEAD------VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCY 244
G + K K G E + VSD + F +++ ++F + L + CT +P
Sbjct: 400 TGSVFKRK--GNEQNENIVEQVSDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTAL 457
Query: 245 IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRR 304
+ M I L+ L D + E ++ +L + EG R
Sbjct: 458 LSSQAATRMYEAIDLVRDVTILAILDGVTGEGVKSVLIPN-GEG------------SDRF 504
Query: 305 SECHFVLR----KLQSSFNEL-NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
S H + KL S E+ LP+ ++ L+++L CL A L STAS S L++
Sbjct: 505 SSQHVTVEDDYLKLLRSIPEIFPLPAVSDRHLIKEL----CLGHACLLFSTASCSARLYT 560
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
P+ LVIDEAAQLKE ES+IP+QL G++H +L GDE QLPAMVES+++ EA FGRS
Sbjct: 561 GT--PIQLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRS 618
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL+ LG+ K++L+IQYRMH SIS FPN Y KI D+ TVR+R+Y K++L G MYG
Sbjct: 619 LFERLALLGHKKYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYG 678
Query: 480 PYSFINV---FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
PYSFIN+ E S +N VEV VV I+ NL + +K ++++G++SPY AQ
Sbjct: 679 PYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQ 738
Query: 537 VVAIQEKLGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
V+AIQEK+ + AG F++++ ++DGFQGGEED+II+STVRSN G +GFL N +R
Sbjct: 739 VIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRT 798
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKEL 654
NV LTRAR CLWILGN TL KSVW L+ DA R CF +A +D+ L +AI +
Sbjct: 799 NVLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQAIAST---- 854
Query: 655 DELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRN 714
N E R + +WK+ FS+ F K ++ + T + + + L +LS GW ++
Sbjct: 855 -------NIEFRPLNNSKWKLCFSDEFKKYVGEIKNPETYRKIKNFLERLSQGWLKEEET 907
Query: 715 VDSVCGSSLHIIKQFKVEG-FYIICTIDIVKES-QYFQVLKVWDILPLEDVPKVVARLDN 772
SS ++KQ K++ II +DI+KE Y QVLK+WD++P D P+ + RLD
Sbjct: 908 ERENLVSSSQLLKQSKIDDVLRIIWAVDILKEDFHYDQVLKIWDVVPSSDAPEALKRLDL 967
Query: 773 IYVKYTAEFINHCKEKSIEGNLEVPKTWTATS 804
+ YT + I CK + I G++ VP W+ S
Sbjct: 968 NHTNYTKDEIEKCKARCIRGDIVVPMRWSIES 999
>gi|6686403|gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis thaliana]
Length = 1076
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 328/812 (40%), Positives = 469/812 (57%), Gaps = 63/812 (7%)
Query: 17 NETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
++ P LN SQ A+L+CL RC H T++LIWGPPGTGKTKT S+LL LL
Sbjct: 227 SDGLAPRRFLKLNPSQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNA 286
Query: 77 KFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--G 134
K RTL C PTNV++ E+A+RV+KLV S++ + LGD++L GN+ER+K+
Sbjct: 287 KCRTLTCGPTNVSVLEVASRVLKLVSGSLKIGN-----YGLGDVVLFGNDERMKIKDRKD 341
Query: 135 VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN----ESMKQSEDI 190
+ I++D RV +L CF P GW M+ L++ Y+ Y++N ++K+ +
Sbjct: 342 LVNIFIDERVDKLYPCFMPFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKD-- 399
Query: 191 NGDIIKEKECGKEAD------VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCY 244
G + K K G E + VSD + F +++ ++F + L + CT +P
Sbjct: 400 TGSVFKRK--GNEQNENIVEQVSDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTAL 457
Query: 245 IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRR 304
+ M I L+ L D + E ++ +L + EG R
Sbjct: 458 LSSQAATRMYEAIDLVRDVTILAILDGVTGEGVKSVLIPN-GEG------------SDRF 504
Query: 305 SECHFVLR----KLQSSFNEL-NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
S H + KL S E+ LP+ ++ L+++L CL A L STAS S L++
Sbjct: 505 SSQHVTVEDDYLKLLRSIPEIFPLPAVSDRHLIKEL----CLGHACLLFSTASCSARLYT 560
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
P+ LVIDEAAQLKE ES+IP+QL G++H +L GDE QLPAMVES+++ EA FGRS
Sbjct: 561 GT--PIQLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRS 618
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL+ LG+ K++L+IQYRMH SIS FPN Y KI D+ TVR+R+Y K++L G MYG
Sbjct: 619 LFERLALLGHKKYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYG 678
Query: 480 PYSFINV---FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
PYSFIN+ E S +N VEV VV I+ NL + +K ++++G++SPY AQ
Sbjct: 679 PYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQ 738
Query: 537 VVAIQEKLGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
V+AIQEK+ + AG F++++ ++DGFQGGEED+II+STVRSN G +GFL N +R
Sbjct: 739 VIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRT 798
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKEL 654
NV LTRAR CLWILGN TL KSVW L+ DA R CF +A +D+ L +AI +
Sbjct: 799 NVLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQAIAST---- 854
Query: 655 DELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRN 714
N E R + +WK+ FS+ F K ++ + T + + + L +LS GW ++
Sbjct: 855 -------NIEFRPLNNSKWKLCFSDEFKKYVGEIKNPETYRKIKNFLERLSQGWLKEEET 907
Query: 715 VDSVCGSSLHIIKQFKVEG-FYIICTIDIVKES-QYFQVLKVWDILPLEDVPKVVARLDN 772
SS ++KQ K++ II +DI+KE Y QVLK+WD++P D P+ + RLD
Sbjct: 908 ERENLVSSSQLLKQSKIDDVLRIIWAVDILKEDFHYDQVLKIWDVVPSSDAPEALKRLDL 967
Query: 773 IYVKYTAEFINHCKEKSIEGNLEVPKTWTATS 804
+ YT + I CK + I G++ VP W+ S
Sbjct: 968 NHTNYTKDEIEKCKARCIRGDIVVPMRWSIES 999
>gi|357460649|ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
gi|355489654|gb|AES70857.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
Length = 950
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 314/675 (46%), Positives = 407/675 (60%), Gaps = 51/675 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S LN+SQ AVLS + C H TI+LIWGPPGTGKTKTV+ LL LL+ K RTL C
Sbjct: 253 SENLNESQKDAVLSSVSMRECHHSDTIKLIWGPPGTGKTKTVASLLFSLLKFKARTLTCA 312
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVD--SGVEEIYLDY 142
PTN A+ E+AAR+ LV++S+E D + LGDI++ GN R+KVD +++I+LDY
Sbjct: 313 PTNTAVLEVAARLQNLVEKSLEHDVDT---YGLGDIVIFGNRSRMKVDCYRCLQDIFLDY 369
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTY-IDNE------------------- 182
RV L CFAP TGW H SM+ L+N Y Y +D E
Sbjct: 370 RVSNLLRCFAPFTGWKHYLESMIALLENPSKKYGMYKLDAENSIMSLEQFTMLKHEEVEL 429
Query: 183 ---SMKQSEDINGDIIK-----EKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIF 234
S KQ E N D + +KE + I F +FV+ RF I A L+ C
Sbjct: 430 AYSSYKQHEK-NDDPLTLAQFVKKEYHSYKEDKKNSIMTFEQFVKMRFSSIVAELKLCKK 488
Query: 235 NFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIV 294
T +P + + + LL S E+ ++ +L++ L D G +SI
Sbjct: 489 TLYTHLPTSLFPFEEMKKIPIALDLLTSLES-----SMCKAKLKQTLD---DHGDGESIF 540
Query: 295 GIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
L+ +C +LR L +++LP+ EK +E FCL ASL TASSS
Sbjct: 541 DCLGRLNNTTEDCVCLLRSL---LKKISLPNITEKYEIE----KFCLMNASLIFCTASSS 593
Query: 355 YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEA 414
L + M P+ FLVIDEAAQLKE ES IPLQL G+ HAVL GDE QLPA+V+S V+ EA
Sbjct: 594 TRLFTEGMTPIKFLVIDEAAQLKECESAIPLQLPGLHHAVLIGDERQLPAVVKSTVTEEA 653
Query: 415 CFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
+GRSLFERL LGY KHLL+ QYRMHPSIS FPN FYE ++ D+ VR+ SY + FL
Sbjct: 654 GYGRSLFERLVSLGYKKHLLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSYNRCFLE 713
Query: 475 GPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPY 533
G MY YSFIN+ G+E+ HS +NMVE +V+ KI+ +L + + +++K+SIGI+SPY
Sbjct: 714 GKMYASYSFINIAKGKEQRGRGHSSKNMVEAAVISKIIGSLKEEFHRTRKKVSIGIISPY 773
Query: 534 SAQVVAIQEKLG-SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
+AQV IQEK+ + ++ F+V V S+DGFQGGEED+IIISTVRSN IGFLSN +
Sbjct: 774 NAQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQ 833
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKK 652
R NVALTRARHCLWILGN TL + S+W+ LV DA R CF NAD+DK L +AI
Sbjct: 834 RANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADEDKKLAEAIEDALL 893
Query: 653 ELDELDELLNPESRL 667
E++ LDE +P +L
Sbjct: 894 EIEFLDESESPFKKL 908
>gi|357143184|ref|XP_003572832.1| PREDICTED: LOW QUALITY PROTEIN: helicase sen1-like [Brachypodium
distachyon]
Length = 924
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/664 (45%), Positives = 404/664 (60%), Gaps = 34/664 (5%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ +AVL CL + D ++LIWGPPGTGKTKT+S LL ++ RTL C PTN
Sbjct: 264 LNGSQRRAVLDCLIMEQPD-TCQVRLIWGPPGTGKTKTISTLLWSMMVKNHRTLTCAPTN 322
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
A+ E+A+RV+ LV++S F L D++L GN +R+ VD +I+L+ RV+RL
Sbjct: 323 TAVVEVASRVLSLVEDSCGGSSGKKCF--LSDVVLFGNEDRMNVDQSPGKIFLEKRVRRL 380
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN------ESMKQSEDINGDIIKEKECG 201
C P GW++C +SMV L+ + Y +Y+ E +Q ++ K K
Sbjct: 381 QKCLMPGAGWTNCLSSMVRILEEPLPQYDSYVQQIEREIEELARQEKEERAKKDKNKMVE 440
Query: 202 KEADVSDVEIKPFLEFVRD---RFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
+ D++ + + F D +K + + L +CI FC +P+ NF M ++
Sbjct: 441 AKEDLAKKKRIQKMSFKDDFLSHYKEVESSLANCIEIFCNDLPRSATAGQNFRYMTEVLR 500
Query: 259 LLDSFETLLFEDNLVSEELEELLSHSVDEG----LSKSIV-----GIKYLLHKRRSECHF 309
LL F L + ++LE L +G L +S+V ++ L + RS
Sbjct: 501 LLKEFGRLAQHEP--DKQLETLFRIRDTDGETSCLFRSLVVYVQDSVRTELKQARS---L 555
Query: 310 VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA-MEPLNFL 368
+ +L N +LP EK +ED F L+ L TASSS LH + EP + L
Sbjct: 556 GIERLNDLSNNFDLPEVYEKRSIED----FLLRSCKSVLCTASSSSRLHYLQKAEPFDLL 611
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG 428
V+DEAAQLKE ES +PLQ+ GI+ AVL GDE QLPA+V+SKV +ACFGRSLFERLS LG
Sbjct: 612 VVDEAAQLKECESLLPLQIPGIRLAVLVGDEYQLPALVKSKVCEDACFGRSLFERLSSLG 671
Query: 429 YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG 488
+ KHLL +QYRMHP IS FP S FYE++I D V KR YE++ L GPMYG YSFIN+ G
Sbjct: 672 HPKHLLDVQYRMHPGISKFPVSSFYESRITDGENVLKRDYERKHLTGPMYGSYSFINIEG 731
Query: 489 GREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G+E + S N +EV+ V +I+ L+K ++++ KLS+G+VSPY QV AIQEKLG
Sbjct: 732 GKESTGKFDKSLVNTIEVAAVTRIVQRLFKECMETRRKLSVGVVSPYKGQVRAIQEKLGK 791
Query: 547 KY-VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
Y V F+VKV S+DGFQG EED+IIISTVRSN GS+GFL+N R NVALTRA+HCL
Sbjct: 792 TYEVRPGEFSVKVRSVDGFQGAEEDIIIISTVRSNAAGSVGFLNNVNRTNVALTRAKHCL 851
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
WILGNA TL K++W+ +V DA R CFFNA+DD DL +AI+ ELDE++ +LN E
Sbjct: 852 WILGNATTLVSSKTIWQKIVADAKDRGCFFNANDDNDLSRAIIKAVIELDEVENVLNMEM 911
Query: 666 RLFR 669
R
Sbjct: 912 GALR 915
>gi|413919137|gb|AFW59069.1| hypothetical protein ZEAMMB73_371687 [Zea mays]
Length = 968
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 292/636 (45%), Positives = 400/636 (62%), Gaps = 53/636 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AVL+C+ +M +T LIWGPPGTGKTKT+S+LL ++ +MK TLVC PTN
Sbjct: 265 LNTSQNDAVLNCISKMH-SKSSTFTLIWGPPGTGKTKTISVLLWLMREMKHGTLVCAPTN 323
Query: 88 VAIKELAARVVKLVKE-SVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
+AIK++A+R +KLV+E S + C LGD+LL+GN ER+ VD +++IYL RV+R
Sbjct: 324 LAIKQVASRFLKLVQEHSGDTRC-------LGDVLLIGNKERMCVDGDLKQIYLYDRVRR 376
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADV 206
L CFAPLTGW H +S+ DFL+N S Y ++ + +E D
Sbjct: 377 LFGCFAPLTGWKHHLSSLSDFLENGYSQYLQHLQD-------------------SQEGDT 417
Query: 207 SDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETL 266
F + R RF I LR C + +PK I + N++ + L+ +L+ F +
Sbjct: 418 PS-----FFSYARKRFAVIYMELRRCFNDLLLHVPKSSILEVNYNSILLLLEMLEEFNHM 472
Query: 267 LFEDNLVSEELEELLSHSVDEG--LSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLP 324
+ + +E+ ++ +S DE + S+V L K R +C L +L + + L LP
Sbjct: 473 I-QCRYFGDEIRKVFLYSNDEPDQTNSSVV----TLGKMRIKC---LEELSTLLSCLKLP 524
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIP 384
K + D FC+K AS+ T SSS + A + + FLV+DEAAQLKE E+ IP
Sbjct: 525 LTSSKPTIRD----FCIKSASIVFCTVSSSTKI--TANKKVEFLVVDEAAQLKECETLIP 578
Query: 385 LQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSI 444
L+L +KHAVL GDECQLPA V+SKV +A FGRSLFERLS LG+ KHLL++QYRMHPSI
Sbjct: 579 LRLWTLKHAVLIGDECQLPATVKSKVCTDALFGRSLFERLSSLGHEKHLLNMQYRMHPSI 638
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE--HSCRNMV 502
S FPN+ FYE +I D++ V ++ + + +L G M+GPYSFIN+ GREE E HS RN V
Sbjct: 639 SIFPNTSFYEGRISDATNVMEKEHRRMYLPGSMFGPYSFINIEDGREERDELGHSKRNFV 698
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E +V+ +IL L +A +K K+++G++ PY+AQVVAIQ K+ + VK S+D
Sbjct: 699 EAAVIEEILYRLRRACFKTKRKVTVGVICPYNAQVVAIQGKIEKMRFDP--LQVKTNSVD 756
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
GFQGGEED+II+STVRSN+ G +GFLSN++R NV LTRARHCLWILGNA TL S+W
Sbjct: 757 GFQGGEEDIIILSTVRSNSVGKVGFLSNAQRANVCLTRARHCLWILGNATTLASSGSIWS 816
Query: 623 ALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
LV DA R+CFFNA D + I +++LD ++
Sbjct: 817 DLVRDAKDRRCFFNASSDYVISHVIAKQRRDLDRVN 852
>gi|302143703|emb|CBI22564.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/482 (55%), Positives = 330/482 (68%), Gaps = 7/482 (1%)
Query: 331 LLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGI 390
L D +K+FCL ASL TASSS LH M+P LVIDEAAQLKE ES IPLQL+G+
Sbjct: 433 FLYDEIKNFCLCNASLIFCTASSSAKLHMAGMKPFELLVIDEAAQLKECESAIPLQLAGL 492
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNS 450
+HA+L GDE QLPAMV+SK+S A FGRSLFERL LG+ KHLL++QYRMHPSIS FPN
Sbjct: 493 RHAILVGDELQLPAMVKSKISTSAEFGRSLFERLVSLGHRKHLLNLQYRMHPSISLFPNQ 552
Query: 451 YFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV-FGGREEFIEHSCRNMVEVSVVMK 509
FY NKI D+ V++RSY++ FL G MYG YSFINV +G E+ HS RNMVEV V +
Sbjct: 553 EFYNNKISDAPNVKERSYKRCFLQGDMYGSYSFINVAYGNEEQSNSHSTRNMVEVVAVSE 612
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS--AGFAVKVMSIDGFQGG 567
I+ L+K + +K+K+S+G++SPY+AQV AIQEKLG Y S + F+V V S+DGFQGG
Sbjct: 613 IVAKLFKESVANKQKVSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDGFQGG 672
Query: 568 EEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
EED+IIISTVRSN G +GFLSN +R NVALTRARHCLWILGN TL ++W LV +
Sbjct: 673 EEDVIIISTVRSNLNGKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTKLVSN 732
Query: 628 ANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRK 687
A AR CF+NA+DDK+L +AI E L N +S LFR RWKV FS++F KS K
Sbjct: 733 AKARGCFYNAEDDKNLAQAIATSLVEHGYFHLLQNMDSLLFREARWKVCFSDDFWKSLAK 792
Query: 688 LTSDPTKKSVIHLLLKLSNGWR-PKKRNV-DSVCGSSLHIIKQFKVEGFY-IICTIDIVK 744
+ K V+ LL KLS+GWR P + +++ G+ + +Q+KV G ++ T DI K
Sbjct: 793 IKRTEINKEVLRLLEKLSSGWRSPNNEKIPNAITGTCSELFQQYKVNGLLDLVWTTDIFK 852
Query: 745 E-SQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTAT 803
E S QVLKVWDILP + K+ RL+ + YT +N CK K IEGNLEVP W
Sbjct: 853 ENSNCTQVLKVWDILPRSETSKLARRLETLLGNYTVNDMNRCKVKCIEGNLEVPMRWPGN 912
Query: 804 SN 805
N
Sbjct: 913 MN 914
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 13/191 (6%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
+ TC LC VW+ P LNDSQ AV SC+ +CDH+ +++LIWGPPGT
Sbjct: 211 AENTCTLCFSNPASVWDPITCPF---NLNDSQQAAVSSCIAARKCDHQNSVKLIWGPPGT 267
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTV LL +L +MK RT+ C PTN+A+ E+ R+V+LV+ES+E C + LGDI
Sbjct: 268 GKTKTVGTLLFVLFRMKCRTVTCAPTNIAVIEVTTRLVRLVRESIE--CGS---YGLGDI 322
Query: 121 LLLGNNERLKVD--SGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTY 178
+L GN ER+K+D + +++L++R+ LA CFAPL+GW H SM+ L++ +Y
Sbjct: 323 VLFGNGERMKIDKHDDLLDVFLNFRINILARCFAPLSGWKHSIESMISLLEDPEEMYD-- 380
Query: 179 IDNESMKQSED 189
N+S K+ +D
Sbjct: 381 -KNQSRKRRKD 390
>gi|242062912|ref|XP_002452745.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
gi|241932576|gb|EES05721.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
Length = 956
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 293/678 (43%), Positives = 402/678 (59%), Gaps = 54/678 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ ++ +++LIWGPPGTGKTKT+S LL +L RT+ C PTN
Sbjct: 272 LNASQLMAVHDCVSAVQ-QPTCSVRLIWGPPGTGKTKTISTLLWSMLVKNHRTVTCAPTN 330
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG-VEEIYLDYRVKR 146
A+ E+A+RV+ LV ES R L D++L GN R+ V+ G +++I+++ RV+R
Sbjct: 331 TAVVEVASRVLDLVDESSSGGGRHGRKCFLSDVVLFGNEGRMGVEEGNLQKIFMESRVRR 390
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN-ES-------------------MKQ 186
L C P TGW+ +SM+ L + YH Y+ ES +K
Sbjct: 391 LRQCLMPGTGWAQSLSSMLRLLQHPSVEYHRYVQGLESEIRELVSDENDLRDELGRYLKN 450
Query: 187 SEDINGDIIKEK--ECGKEADVSDVEIK------PFLEFVRDRFKCIAAPLRSCIFNFCT 238
E++ EK E K+ + EI+ PF + + + + L +C+ F
Sbjct: 451 REELTNRTKVEKVQEIQKKLEKIQKEIRELKEEMPFKIYFQSNYTMLVNHLHTCVKTFGD 510
Query: 239 RIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG----LSKSIV 294
+P+ ++NF MA L +LL +F L+ + ++L+ L ++ D+G L +S+V
Sbjct: 511 DLPRSVTSEENFRCMAELPALLTAFGELVQSEP--EQQLQALFRNAEDDGGIRSLFRSLV 568
Query: 295 G-----IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLS 349
+ + L + RS C ++KLQ + LP E +ED F L+RA L
Sbjct: 569 SQVQTDVSFELKEARSSC---VQKLQHLSDHFELPDMFESRTIED----FLLQRAKSVLC 621
Query: 350 TASSSYMLHSVA-MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
TASSSY LH + +P LV+DEAAQLKE ES IP+QL G++HAVL GDE QLPA+V+S
Sbjct: 622 TASSSYRLHCLQNAQPFEVLVVDEAAQLKECESLIPMQLPGVRHAVLIGDEYQLPALVKS 681
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
KV +A FGRSLF RL+ LG KHLL +QYRMHP IS FP FY+ +I D V KR+Y
Sbjct: 682 KVCEDAEFGRSLFVRLTSLGQPKHLLDVQYRMHPWISKFPVESFYDGRITDGPNVLKRNY 741
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
E+R L GPMYG YSFIN+ G E +H S N +E + V++IL L+K +D+K +
Sbjct: 742 ERRHLSGPMYGSYSFINIDSGNESTGKHDRSLINSIEAAAVVRILQRLFKESVDTKRGVR 801
Query: 527 IGIVSPYSAQVVAIQEKL-GSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGG 583
+G+VSPY QV AIQEK+ G+ G F+VKV S+DGFQG EED+II STVRSN G
Sbjct: 802 VGVVSPYKGQVRAIQEKITGAALAAHEGGLFSVKVRSVDGFQGAEEDVIIFSTVRSNKAG 861
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDL 643
IGFL++ R NVALTRA+HCLWILGNA+TL K++W +V DA R C+F+A DDKDL
Sbjct: 862 KIGFLADINRTNVALTRAKHCLWILGNAKTLASAKTIWRGIVADAKDRGCYFDATDDKDL 921
Query: 644 GKAILAVKKELDELDELL 661
I+ ELD++D LL
Sbjct: 922 NNVIIKAAIELDQVDSLL 939
>gi|414886670|tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea mays]
Length = 925
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 289/662 (43%), Positives = 400/662 (60%), Gaps = 49/662 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ AV C+ + +++LIWGPPGTGKTKT+S LL +L RT+ C PTN
Sbjct: 270 LNDSQLYAVHDCVSAVH-QPACSVRLIWGPPGTGKTKTISALLWSMLIENHRTVTCAPTN 328
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
A+ E+A+RV+ +++ES C F LGD++L GN +R+ VD +E+I++ RV RL
Sbjct: 329 TAVAEVASRVLGVIEESGS-GCAATKCF-LGDVVLFGNEDRMAVDRKLEKIFIGSRVCRL 386
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID----------NESMKQSEDI------- 190
C P TGW++ +SM+ L++ + Y Y + +E +K +I
Sbjct: 387 RQCMMPSTGWTNSLSSMIVLLEDPMVPYERYDEAIQGCLLHFVSEEIKLRNEIAVCSLRT 446
Query: 191 -NGDIIKEK-----ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCY 244
+ +KE E K+ + + E + + + +K +A LR+C+ F +P+
Sbjct: 447 MDDKKVKEMQKDLLEVQKKVRLVEREKMSYETYFQSNYKKLAKDLRTCVETFVDDLPRSA 506
Query: 245 IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRR 304
++NF MA + LLD+F L+ SE E+L + L K + + L R
Sbjct: 507 TSEENFCCMAEMPLLLDAFGVLV-----QSEPFEQL------QALFKRDTDVSFRLKDAR 555
Query: 305 SECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA-ME 363
S C LR L S+F LP + +E+ F L+ A + L TASSSY LH + +
Sbjct: 556 SSCLCKLRLLSSNFE---LPEMYDSRTIEE----FLLQNAKIVLCTASSSYRLHYMQKAQ 608
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
PL LV+DEAAQLKE ES IPLQL G++HAVL GDE QLPA+V+SKV +A FGRSLFER
Sbjct: 609 PLEVLVVDEAAQLKECESLIPLQLPGVRHAVLIGDEYQLPALVKSKVCEDAGFGRSLFER 668
Query: 424 LSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSF 483
L+ L KHLL +QYRMHP IS FP S FY +I D V R+YE+R L GPMYG YSF
Sbjct: 669 LTSLEQPKHLLDVQYRMHPWISKFPVSSFYGGRITDGPNVLNRNYERRHLAGPMYGSYSF 728
Query: 484 INVFGGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
IN+ GG E + S N VE + V +I+ L+ +D+++ + +G+VSPY QV AI+
Sbjct: 729 INIDGGSEATGKQDRSLINPVEAAAVARIVQKLFIESVDTRKAIRVGVVSPYKGQVRAIE 788
Query: 542 EKLGSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
EKLG + +++ F+VKV ++DGFQG EED+II STVRSN G IGFL+++ R NVALT
Sbjct: 789 EKLGKQVYSMHNGSFSVKVRTVDGFQGAEEDVIIFSTVRSNTAGKIGFLADTNRTNVALT 848
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RA+HCLWILGNA+TL K++W +V DA R CFF+A DD+DL AI+ ELD ++
Sbjct: 849 RAKHCLWILGNAKTLASGKTIWRQIVDDAKERGCFFDAKDDQDLASAIIKASIELDLVEN 908
Query: 660 LL 661
LL
Sbjct: 909 LL 910
>gi|357491687|ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517466|gb|AES99089.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 950
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 298/682 (43%), Positives = 400/682 (58%), Gaps = 62/682 (9%)
Query: 3 ETCELCSMQSEGVWNETF----GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
E+C+LC G +E F S LN+SQ AV SC+ + C H A I+LIWGPP
Sbjct: 231 ESCKLCL---SGSNSEAFLIKEDIIHSQNLNESQEDAVSSCVGMINCCH-ANIKLIWGPP 286
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG 118
GTGKTKTV+ LL L ++K RTL C PTN AI ++A R+ LV +SVE D + LG
Sbjct: 287 GTGKTKTVACLLFSLFKLKTRTLTCAPTNTAILQVATRIHSLVMDSVEHDT-----YGLG 341
Query: 119 DILLLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYH 176
DI+L GNN+R+K+DS G+ +I+LDYRV+ L CF+PLTGW SM FL + Y
Sbjct: 342 DIVLFGNNKRMKLDSYPGLGDIFLDYRVRNLMQCFSPLTGWKQTLESMTQFLKDPKKEYL 401
Query: 177 TYIDNESM------------------KQSEDINGDIIKE-------KECGKEADVSDVE- 210
+ ID++S+ K+ I+ + E KE +E +++
Sbjct: 402 SQIDHKSLEEFVNEKHCHVISAYRAYKRISRIDDTMTLEEYVQKLWKEIAEEYRSDEIDK 461
Query: 211 ---IKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLL 267
F +FV+ RF+ ++ L+ I T +PK +I M + LL S L
Sbjct: 462 VENFMTFEQFVKKRFRELSEKLKFLIQTLYTHLPKSFISLATVKKMFRGLELLRSIGVSL 521
Query: 268 FEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAV 327
+ + L++ ++ S I L ELN +
Sbjct: 522 HQAKF-KKTLDDCEKENIPACFEPSNFEIDEFLRLLSLL------SNSILLPELNGRGHI 574
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
EK FCL A L L T SSS L++ M + FLVIDEAAQLKE ES IPLQL
Sbjct: 575 EK---------FCLSNACLILCTVSSSIKLYTEGMAHVKFLVIDEAAQLKECESMIPLQL 625
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCF 447
G++H +L GDE QLPA+V+SK+++ FGRS+FERL LGY KH+L++QYRMHP+IS F
Sbjct: 626 PGLQHGILIGDEKQLPALVKSKIADNCGFGRSMFERLVMLGYKKHMLNVQYRMHPAISMF 685
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSV 506
P FY+ +I D+ V+ SY+K FL G MY YSFIN+ G+E+ HS +NMVEV+V
Sbjct: 686 PCKEFYDEQISDAPVVKDASYKKSFLEGEMYASYSFINIAKGKEKSGRGHSLKNMVEVAV 745
Query: 507 VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS-KYVNSAGFAVKVMSIDGFQ 565
+ +++ NL K + +++K+SIGI+SPY+AQV IQEK+ V+ F+V V SIDGFQ
Sbjct: 746 ISEMINNLKKEFKRTQKKVSIGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQ 805
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
GGEED+IIISTVRSN G++GFLSN +R NVA+TRAR+CLWILGNA TL S+W L+
Sbjct: 806 GGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLI 865
Query: 626 HDANARQCFFNADDDKDLGKAI 647
DA R C+ NADDDK L + I
Sbjct: 866 VDAKRRDCYHNADDDKKLARVI 887
>gi|357491667|ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 978
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 288/674 (42%), Positives = 397/674 (58%), Gaps = 58/674 (8%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
+ LN+SQ A+LSCL +C H I+LIWGPPGTGKTKTV+ +L LL+++ RTL C
Sbjct: 238 AQNLNESQKDAILSCLHMKKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLTCA 297
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--GVEEIYLDY 142
PTN A+ + +R+ + K+S+E + LGDILL GN++R+K++S G+ E++LD
Sbjct: 298 PTNTAVLAVVSRLHSIAKDSLEHGS-----YGLGDILLFGNSKRMKIESYKGLGEVFLDN 352
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID---NESMKQSEDI---NGDIIK 196
RV L CF+P+TGW +C SM+ L + Y Y++ NE++ E+ N +K
Sbjct: 353 RVDDLLYCFSPMTGWKNCLESMISLLKDPEEQYALYLNSKHNENVMSLEEFAVGNYSHVK 412
Query: 197 ------EKECGKEA-----------------------DVSDVEIKPFLE-FVRDRFKCIA 226
+K C D V + +E F + +F C
Sbjct: 413 PAYLSYKKRCKYHCLLTLEEFVKKKYGYIVEQYDIYQDDKKVSVGMSMEQFFKQKFCCFG 472
Query: 227 APLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVD 286
L+S + CT +P ++ + ++ LL S E L + S++ + L H
Sbjct: 473 GKLKSLMKTLCTHLPTSFVSLKVAMKIFRVLELLKSLEVSLSQ----SKQKQSLNDHF-- 526
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
G+ + I L + E L L + LP K + FCLK A L
Sbjct: 527 -GVGQRIFSWFGWLSFEKEE---FLHTLCFLCETIKLPKLTSKYGISQ----FCLKNACL 578
Query: 347 FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMV 406
TASSS L++ M+ + FLVIDEAAQLKE ES IPLQL G+K +L GDE QLPAMV
Sbjct: 579 LFCTASSSSKLYTEGMKRVEFLVIDEAAQLKECESAIPLQLHGLKRCILIGDERQLPAMV 638
Query: 407 ESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR 466
+SK+++ A FGRSLFERL LGY KH+L +QYRMHPSIS FP+ FY+ ++ D++ VR+
Sbjct: 639 KSKIADRAEFGRSLFERLVLLGYKKHMLDVQYRMHPSISMFPSKEFYDGQLSDANIVREI 698
Query: 467 SYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
SY KRFL G MYG YSFIN+ G+E+ +HS +N++E + + +I+ L K ++ ++ K+
Sbjct: 699 SYNKRFLEGKMYGSYSFINISKGKEQCNHDHSLKNVIEAAAISEIIGRLKKEFVRARNKV 758
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
SIGI+SPY AQV IQEK+ V+ F+V V S+DGFQGGEED+IIISTVRSN G +
Sbjct: 759 SIGIISPYKAQVHEIQEKVKQYMVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKV 818
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGK 645
GFLSN +R NVA+TRAR+CLWI+GNA TL SVW +V DA R CF N D+DK L +
Sbjct: 819 GFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCFHNTDEDKKLDQ 878
Query: 646 AILAVKKELDELDE 659
I E + LDE
Sbjct: 879 VIEDACFEFELLDE 892
>gi|242076910|ref|XP_002448391.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
gi|241939574|gb|EES12719.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
Length = 925
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/697 (41%), Positives = 408/697 (58%), Gaps = 68/697 (9%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPG 59
V++ CS S+ T G L LNDSQ AV C+ M DH ++I+L+WGPPG
Sbjct: 266 VEDGSSSCSQLSQVAHRSTDGLGLEKFNLNDSQLNAVADCVSSMD-DHSSSIKLLWGPPG 324
Query: 60 TGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGD 119
TGKTKT+S +L +L +TL C PTN A+ E+AAR+VKLV +S + +L F L D
Sbjct: 325 TGKTKTISTILWAMLIKDRKTLACAPTNTAVLEVAARIVKLVGKSAD----GSLCF-LND 379
Query: 120 ILLLGNNERLKVD--SGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHT 177
I+L GN +KVD S + ++LD R +RL CF P +GW HC S++D ++N V++Y
Sbjct: 380 IILFGNRNNMKVDDESDLSSVFLDSRAERLLPCFVPNSGWRHCLCSLIDLIENQVTMYQL 439
Query: 178 YIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFC 237
Y + +++ Q +++D + + LR CI
Sbjct: 440 YSEGKTLSQ------------------------------YLKDEYNKHSRKLRGCIEILY 469
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFED-----NLVSEELEELLSHSVDEGL--- 289
P+ +F M+ ++ L++ L+ +D ++ S+EL E+ + L
Sbjct: 470 NDHPRNAETGRSFQCMSEVLELINIIHDLINDDKDDGHDIWSDELLEIKIEDNGDPLLWP 529
Query: 290 -------SKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLK 342
+ S +K+ L RS C L L+++ L LP+ ++ L L
Sbjct: 530 EQLACIQNTSCKKLKFRLA--RSLCVQELSYLRTN---LELPNCYNTRAVQQYL----LL 580
Query: 343 RASLFLSTASSSYMLHSVAM---EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
RA L T SSS+ L++V M L L++DEAAQLKE E+ IPLQL GI+ A+L GDE
Sbjct: 581 RAKCILCTVSSSFRLYNVPMGDTNSLELLIVDEAAQLKECETLIPLQLPGIRQALLIGDE 640
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA V+S +S A FGRS+F+RLS LG+SKHLL++QYRMHP IS FP + FY+ K+ D
Sbjct: 641 YQLPAFVKSTISESASFGRSVFQRLSSLGFSKHLLNVQYRMHPDISNFPVATFYDGKVSD 700
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKA 517
V + Y KRFL G ++GPYSFINV GG E +H S +N +EV+ V++++ L+K
Sbjct: 701 GPNVSHKDYNKRFLSGNLFGPYSFINVEGGHETTEKHGRSLKNTIEVAAVVRMVQRLFKE 760
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ K+S+G+VSPY+AQV AIQEKLG Y GF+V V S+DGFQG EED+IIISTV
Sbjct: 761 AVSKGSKVSVGVVSPYNAQVRAIQEKLGKSYTMYNGFSVNVKSVDGFQGAEEDIIIISTV 820
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
RSN G++GFL+N +R NVALTRA+HCLWI+GN TL+ +VW+ ++ +A R FF+
Sbjct: 821 RSNGAGAVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSSNNTVWQKMIKNARDRGLFFDV 880
Query: 638 DDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWK 674
+DDKDL A+ ELD+ + +N ES R++
Sbjct: 881 NDDKDLSNAVAKAVIELDDAENSVNMESMHISRPRFQ 917
>gi|410129749|dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
Length = 1296
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 297/684 (43%), Positives = 404/684 (59%), Gaps = 78/684 (11%)
Query: 6 ELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKA-TIQLIWGPPGTGKTK 64
E C++ V + G S L++SQ AVLS + +C H+ +++LIWGPPGTGKTK
Sbjct: 350 EDCTICISNVDSTVRGDIDSFKLDESQKNAVLSSIAMRKCSHQNDSVKLIWGPPGTGKTK 409
Query: 65 TVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
TV+ LL LL++K RTL C PTN+A+ ++A R++ L+ +S++ D + LGD++L G
Sbjct: 410 TVASLLFSLLKLKCRTLSCAPTNIAVMQVAKRLMGLLLQSLKHDT-----YGLGDVVLFG 464
Query: 125 NNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN- 181
N ER+KVD E ++LDYR + L+ C +P+ GW H SM L++ V Y Y+ N
Sbjct: 465 NGERMKVDDHDELLNVFLDYRAEVLSKCLSPIDGWKHTLVSMTSLLEDPVEQYKMYLQNR 524
Query: 182 -----------------ESMKQSEDINGDIIKEKECGKE-ADVSDVEIK----------- 212
E + ED +K + K +V D +K
Sbjct: 525 GVFDEEEDEEDSDGSKSEESNECEDTKCSRLKRSDNRKHWKEVIDKSMKGSNNNDDRKYK 584
Query: 213 ------PFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETL 266
F EFV+ RF I L + N T +P +I D + ++ISLLD + L
Sbjct: 585 SNHELLTFEEFVKKRFYSIGDRLAFLMKNLYTHLPTSFITSD---AVKSMISLLDLLKIL 641
Query: 267 LFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSA 326
ED ++ V + L +++E +L+ L F P
Sbjct: 642 --ED-------------------AREKVNQTHQLTMKKAEFLEILKSLPEQF-----PVP 675
Query: 327 VEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
+ D+ +K+ CL A L TASS+ + + MEP+ LVIDEA QLKE ES IPLQ
Sbjct: 676 LFSDI--QAIKTTCLMNARLIFCTASSAAKIQTEGMEPIEMLVIDEAGQLKECESLIPLQ 733
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISC 446
+ G+K+A+L GD+ QLPAMV+SKV+ A FGRSLFERL+ LG KHLL QYRMHPSIS
Sbjct: 734 VPGLKNAILIGDDKQLPAMVQSKVAENADFGRSLFERLANLGKKKHLLKTQYRMHPSISS 793
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVS 505
FPN FY +I D+ V++RSYEK FLH M+G YSFINV G+E F + +S RN+VE +
Sbjct: 794 FPNEVFYGKQIIDAPNVKERSYEKCFLHENMFGTYSFINVSKGKENFDKGYSPRNLVEAA 853
Query: 506 VVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVN--SAGFAVKVMSIDG 563
VV KI+ L+ + +K+S+G++SPY QV I+EK+G KYV GF+V V S+DG
Sbjct: 854 VVNKIIAKLFNEHCITGKKVSVGVISPYKGQVGLIEEKIGKKYVTYKDHGFSVSVRSVDG 913
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
FQGGEED+IIIS+VRSN GS+GFLSN +R NVALTRARHCLWI+GN TL +SVW+
Sbjct: 914 FQGGEEDVIIISSVRSNGKGSVGFLSNHQRTNVALTRARHCLWIVGNGTTLINSESVWKE 973
Query: 624 LVHDANARQCFFNADDDKDLGKAI 647
LV DA R CF+NA+++KDL KAI
Sbjct: 974 LVVDAKLRGCFYNAEENKDLDKAI 997
>gi|357492379|ref|XP_003616478.1| Lupus brain antigen [Medicago truncatula]
gi|355517813|gb|AES99436.1| Lupus brain antigen [Medicago truncatula]
Length = 1276
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/500 (50%), Positives = 339/500 (67%), Gaps = 36/500 (7%)
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
LG KY F VKV +IDGFQGGE+D+II STVR++ S+ +R NVALTRARH
Sbjct: 2 LGQKYDKHEDFNVKVKTIDGFQGGEQDIIIFSTVRTDCSTSL-----DQRTNVALTRARH 56
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
CLWILGN RTL + +VW+ALV DA RQCFFNAD+D+DL K I KKELD+L + LN
Sbjct: 57 CLWILGNERTLVSQDNVWKALVLDAKKRQCFFNADEDEDLVKGIWDAKKELDQLYDFLNS 116
Query: 664 ESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSL 723
+S +FR+ RWKV FS+NFLKSF+ L + TK VI LLLKLS+GWRPK+ VD +CG+S
Sbjct: 117 DSVIFRNSRWKVLFSDNFLKSFKNLPTKRTKMWVISLLLKLSSGWRPKRIKVDLLCGNSS 176
Query: 724 HIIKQFKVEGFYIICTIDIVKESQYFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFIN 783
+ KQ+KVEG +++C+ DIVKE + QVL++WDILP ED+PKV+ RLD+I+ YT +FI+
Sbjct: 177 QMFKQYKVEGLFVVCSKDIVKEVIFTQVLRIWDILPPEDIPKVLKRLDSIFESYTDDFIS 236
Query: 784 HCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSESL 843
E+ EG +EV +W ++ +++ KNL +N + S + G ++
Sbjct: 237 RFSEQRFEGKMEVLMSWEKSTEIIKIKNLVNNGYEAES-IKGFILRTQ------------ 283
Query: 844 SLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTVLT 903
SHLLSDR EL+LPFEV+DE+ ++IL +STF+LGRSGTGKTTVLT
Sbjct: 284 -------------SHLLSDRNSNELELPFEVSDEEHDIILFSKSTFVLGRSGTGKTTVLT 330
Query: 904 RKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLCFA 963
KLF+KEELH +A+E YG+ S E E ++ +RP+L QLFVTVSPKLC A
Sbjct: 331 MKLFKKEELHHVALEHTYGIKIVEVPCLSYEKEYKDSSTLNDRPVLHQLFVTVSPKLCQA 390
Query: 964 IKQHISQMKSSAFGGKFVA-----ESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHK 1018
+KQ +++MK G + E ++D+D +F++ P+SF ++ A SYPLVITF K
Sbjct: 391 VKQQVARMKRFVCGADISSKSCSIEEEIVDVDTSIQFRNKPDSFVNLAANSYPLVITFQK 450
Query: 1019 FLMMLDGTLGSSYFDRFHDI 1038
FLMMLDGT+G+S+F+RF D+
Sbjct: 451 FLMMLDGTVGNSFFERFSDL 470
>gi|326514986|dbj|BAJ99854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 710
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 294/685 (42%), Positives = 396/685 (57%), Gaps = 65/685 (9%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ AV + M +++LIWGPPGTGKTKT+S +L +L RTL C PTN
Sbjct: 29 LNESQLNAVEDSVAAM-GSPSPSLKLIWGPPGTGKTKTISAILWAMLLRGHRTLTCAPTN 87
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
A+ E+A+RVV+LV+E F L DI+LLGNNE++KV++ E ++LDYRV+
Sbjct: 88 TAVLEVASRVVQLVQE-FSNGGSGGCF--LSDIVLLGNNEKMKVEASHELSAVFLDYRVE 144
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSED------INGDIIKEKE 199
RL+ CF+P GW HC S++DFL VS Y Y D + + ED I+ +++ +K+
Sbjct: 145 RLSQCFSPNGGWGHCLRSLIDFLAEPVSKYQLYTDKITKDREEDEEKKKNISSNVLIDKK 204
Query: 200 -----------------CGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPK 242
C E DV PF +FVR K +A L CI P+
Sbjct: 205 NKNVARCNKGNGHEKDRCNNEGDVLMFVTLPFKDFVRATHKELAHNLCHCIETLQNDFPR 264
Query: 243 CYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDE----GLSKSIVGIKY 298
+F M++++ LL D + E +++ D ++ K
Sbjct: 265 DPTTALSFSHMSSVVEATRVLGELL--DAGAGDRHEAWVNNLGDACSLCSVNSDPPCKKC 322
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
K RS C L +L+ N L LP +K +E L L+RA + T S+S+ L+
Sbjct: 323 RFRKARSLC---LGQLEYLRNNLKLPGCYDKRPIEIYL----LQRAKSIMCTVSTSFRLY 375
Query: 359 SV---------------------AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFG 397
+V PL LV+DEAAQLKE E+ IPLQL I+HAV G
Sbjct: 376 NVLPTDNHKPVGGQGQRQLKEPEIFPPLELLVVDEAAQLKECEAMIPLQLPCIRHAVFIG 435
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
DE QLPA+++SK+S A FGRS+FERL LG KHLL QYRMHP IS FP FY +I
Sbjct: 436 DERQLPALIKSKISENADFGRSIFERLISLGCPKHLLDTQYRMHPEISRFPVWRFYGGEI 495
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHS--CRNMVEVSVVMKILLNLY 515
D V +S+ +R L G M+GPYSFINV GGRE EHS +N +E++VV I+ L+
Sbjct: 496 GDGPNVVFKSHRRRLLRGNMFGPYSFINVRGGRESSEEHSRSPKNTIEIAVVSLIVERLF 555
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ S +LS+GI+SPY+AQV A QEKL Y + GF++K+ S+DGFQGGEED+IIIS
Sbjct: 556 RESASSGTRLSVGILSPYNAQVRAFQEKLEKPYGSRDGFSLKIKSVDGFQGGEEDVIIIS 615
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
TVRSN G++GFL ++KR NVALTRA+HCLW++GNA TL++ +SVW+ +V+D+ RQ FF
Sbjct: 616 TVRSNEDGAVGFLRDAKRTNVALTRAKHCLWVIGNATTLSKNRSVWQDIVYDSQRRQRFF 675
Query: 636 NADDDKDLGKAILAVKKELDELDEL 660
+AD DK L AI A ELD D L
Sbjct: 676 HADRDKGLSDAIQAATIELDAADNL 700
>gi|414867534|tpg|DAA46091.1| TPA: hypothetical protein ZEAMMB73_362679 [Zea mays]
Length = 1444
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/669 (42%), Positives = 398/669 (59%), Gaps = 57/669 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ AV SC+ C H++++ L+WGPPGTGKT TV+++L +LL + RTL C PTN
Sbjct: 345 LNDSQLDAVASCILASECTHRSSMGLVWGPPGTGKTTTVAVMLQMLLMKEQRTLACAPTN 404
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
+A+ ++A+R+++L+ + R + LGDI+L GN +RL++ + EIYLD RV++L
Sbjct: 405 MAVLQVASRLLELIGDFSLRH-----NYSLGDIILFGNKDRLQIGKLLSEIYLDDRVQKL 459
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADVS 207
F GW HC S+V FL NC S Y +D ++Q S
Sbjct: 460 LSSFNRQHGWKHCVDSVVTFLKNCNSRYRMSVD---IQQGS------------------S 498
Query: 208 DVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLL 267
D F ++ RF +A L CI F +P+ +GK NF M + LLD + L
Sbjct: 499 DARDLTFKKYFTSRFSTLADGLVRCIDTFYDHLPRSSLGK-NFDKMMFVKRLLDKLQQSL 557
Query: 268 FEDNLVSEELEELLSHSVDE-----GLSKSIVGIKYLLHKRRSECHFVLR---------- 312
D+ VS+EL + + DE G ++ + H +C L
Sbjct: 558 SADD-VSDELLFTIFNPADEVPDSSGSHDDLIDDEDDFH----DCKISLDSPLDIKSLCI 612
Query: 313 KLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV-AMEPLNFLVID 371
K+ S + + LP + + DL CLK A L TASSS+ L + ++ P++ LVID
Sbjct: 613 KILMSLSNMRLPCEDNELSIRDL----CLKHAKLIFCTASSSFELFRLQSVRPISILVID 668
Query: 372 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK 431
EAAQLKE ES +PL L GI+H +L GDE QL ++V+SK++ +A FGRSL++RL +GYSK
Sbjct: 669 EAAQLKECESLVPLLLQGIEHVLLIGDENQLSSLVKSKIAKDADFGRSLYQRLCTMGYSK 728
Query: 432 HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE 491
HLL +QYRMHPSIS FPNS FY+N+I D VR+ Y K +L GP+YG YSFI++ E
Sbjct: 729 HLLEVQYRMHPSISKFPNSNFYDNRISDGPIVRQEDYAKSYLPGPIYGAYSFIHIDNDME 788
Query: 492 --EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYV 549
+ + S +NM EV+V I+ L K + +++ S+GI+SPY+AQV+A+Q++LG K+
Sbjct: 789 MLDSLGQSSKNMAEVAVAANIVERLAKECTEKRQRTSVGIISPYTAQVIALQDRLGRKFE 848
Query: 550 NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
+V V SIDGFQGGEED+I+ISTVRSN G +GFLS+S R+NVALTRA++CLWILG
Sbjct: 849 KHDFLSVTVKSIDGFQGGEEDIILISTVRSNKDGKVGFLSDSGRINVALTRAKYCLWILG 908
Query: 610 NARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAIL-AVKKELDELDELLNPESRLF 668
N TL S+W LV D+ R+CFF+A DKDL + ++ A K E E N SR
Sbjct: 909 NGTTLLASNSIWADLVRDSKRRRCFFDAFKDKDLAEVVMFATKPEQWNRREQRN--SRAN 966
Query: 669 RSQRWKVNF 677
+ W ++
Sbjct: 967 EAPSWPSSW 975
>gi|357491661|ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 950
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 294/698 (42%), Positives = 403/698 (57%), Gaps = 93/698 (13%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
+ LN SQ ++LSC +C H I+LIWGPPGTGKTKTV+ +L LL+++ RTL C
Sbjct: 301 AQNLNKSQEDSILSCFHIKKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLTCA 360
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--GVEEIYLDY 142
PTN A+ + +R+ + K+S+E + LGDI+L GN++R+K+DS + E++L+
Sbjct: 361 PTNTAVLAVVSRLHSIAKDSLEHGS-----YGLGDIVLFGNSKRMKIDSYKDLGEVFLEN 415
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID--NES--MKQSEDINGDI--IK 196
RV L F+P+TGW + SM+ L + Y Y + NE M E NG+ +K
Sbjct: 416 RVDDLLHAFSPMTGWINSLESMIKLLKDPEEQYDLYKNDVNEGVVMSLEEFANGNYNHVK 475
Query: 197 E------KECGKEADVS---------DVEIKPF---------------LEFVRDRFKCIA 226
K C + ++ D I+ + +F+R RF I
Sbjct: 476 NAYFSYTKHCEHDCPMTLEEFVKKKYDYIIEQYDMYKDDKKLSIGMSMEQFLRQRFCFIG 535
Query: 227 APLRSCIFNFCTRIPKCY----IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLS 282
L+ + CT +P C+ + K F V+ L SL + E EELL
Sbjct: 536 GKLKLFMKTLCTHLPTCFLPIKVAKKVFRVLELLKSL----------EKEALHEKEELL- 584
Query: 283 HSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLK 342
H++ LS++I L K+ S + + FCLK
Sbjct: 585 HTLC-FLSETIK----------------LPKVTSKYG----------------ISQFCLK 611
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
A L L TASS L S M + FLVIDEAAQLKE ES IPLQL+G+K VL GDE QL
Sbjct: 612 NACLLLCTASSCVKLFSEGMAQVEFLVIDEAAQLKECESAIPLQLNGLKRCVLVGDEIQL 671
Query: 403 PAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSST 462
PAMV+S++++ A FGRSLFERL+ LGY KH+L++QYRMHPSIS FP+ FY K+ DS
Sbjct: 672 PAMVKSEIADRAGFGRSLFERLATLGYKKHMLNVQYRMHPSISIFPSREFYNKKLSDSQI 731
Query: 463 VRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDS 521
VR+ SY KRFL G MYG YSFIN+ G+E+ +HS +N++E + + +I+ + K ++ +
Sbjct: 732 VREISYNKRFLGGKMYGSYSFINISKGKEQCNHDHSLKNVIEAAAISEIIGRIQKEFVRT 791
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
+ K+SIGI+SPY AQV IQE++ V++ F++ V S+DGFQGGEEDLIIISTVRSN
Sbjct: 792 RNKVSIGIISPYKAQVHEIQERVKQYMVSAPNFSINVRSVDGFQGGEEDLIIISTVRSNF 851
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
GG +GFLSN +R NVA+TRAR+CLWI+GNA TL SVW +V DA R CF NAD+DK
Sbjct: 852 GGKVGFLSNRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCFHNADEDK 911
Query: 642 DLGKAILAVKKELDELDELLNPESRL-FRSQRWKVNFS 678
L + I E + LDE + ++L R + NFS
Sbjct: 912 KLDQVIEDACFEFELLDESESAFNKLSIRDKSETTNFS 949
>gi|186527077|ref|NP_198531.2| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
gi|332006764|gb|AED94147.1| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
Length = 839
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/634 (43%), Positives = 387/634 (61%), Gaps = 50/634 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L CL C HK +++LIWGPPGTGKTKTV+ LL LL+++ +T+VC
Sbjct: 218 STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCA 277
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV---DSGVEEIYLD 141
PTN AI ++A+R++ L KE+ + + LG+I+L GN +R+ + D + +++LD
Sbjct: 278 PTNTAIVQVASRLLSLFKEN---STSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLD 334
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLY--HTYIDNESMKQSEDINGDIIKEKE 199
R+ +L F+P +GW S++ FL+N Y H Y E + E+ +
Sbjct: 335 ERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMEEEAERQEVV--- 391
Query: 200 CGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL 259
V I EFV+ F ++ + +CI + T +PK Y+ D+ +M
Sbjct: 392 ---------VNIPTIGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQS 442
Query: 260 LDSFETLLFEDNLVSEELEELLSHSVD--EGLSKSIVGIKYLLHKRRS-ECHFVLRKLQS 316
L L E+ S VD EG ++ KR S +C LR L
Sbjct: 443 LQRIRYFLREN-----------SSRVDFEEG------NFRFDCFKRLSVDCLKALRLLPK 485
Query: 317 SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQL 376
F +P +E ED+ K FCL+ A + L TAS + ++ + LV+DEAAQL
Sbjct: 486 RFE---IPDMLEN---EDIRK-FCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQL 538
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSI 436
KE ES LQL G++HA+L GDE QLPAMV +++ +A FGRSLFERL LG++KHLL +
Sbjct: 539 KECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDV 598
Query: 437 QYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE- 495
QYRMHPSIS FPN FY +I+D+ V++ Y+KRFL G M+G +SFINV G+EEF +
Sbjct: 599 QYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDG 658
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG-- 553
HS +NMVEV+VV +I+ NL+K + + K+S+G+VSPY Q+ AIQEK+G KY + +G
Sbjct: 659 HSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQ 718
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
FA+ V S+DGFQGGEED+IIISTVRSN+ G +GFL+N +R NVALTRARHCLW++GN T
Sbjct: 719 FALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETT 778
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
L S+W L+ ++ R CF++A D+ +L A+
Sbjct: 779 LALSGSIWATLISESRTRGCFYDATDEMNLRNAM 812
>gi|302143704|emb|CBI22565.3| unnamed protein product [Vitis vinifera]
Length = 960
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/474 (55%), Positives = 337/474 (71%), Gaps = 8/474 (1%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+KSFCL+ A+L TASSS + V +P+ LVIDEAAQLKE ES IPLQ+SGI+HA+L
Sbjct: 470 IKSFCLQNATLLFCTASSSAKI-PVGGKPIELLVIDEAAQLKECESAIPLQISGIRHAIL 528
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPAMV+SK+S EA FGRSLF+RL LG+ KHLL++QYRMHPSIS FPN FY+N
Sbjct: 529 IGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYRMHPSISLFPNREFYDN 588
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNL 514
I D+ V++R YE+ +LHG MYG YSFINV G+EEF +S RNMVEV VV +++ L
Sbjct: 589 LILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEEFDYRYSTRNMVEVVVVSEMVATL 648
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAVKVMSIDGFQGGEEDLI 572
KA K+++S+GI+SPY AQV AIQ++LG KY +SA F+V V S+DGFQGGEED+I
Sbjct: 649 AKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSVSVRSVDGFQGGEEDII 708
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
IISTVR N GS+GF+SN +R NVALTRAR+CLWI GN TL +VW LV+DA R
Sbjct: 709 IISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEHSGTVWGKLVNDAKDRG 768
Query: 633 CFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDP 692
CF NA++D +L +AI EL EL L +S LFR RWKV+FS++F KS ++ S
Sbjct: 769 CFHNAEEDNNLARAITTSLVELGELHLLQKQDSLLFRKARWKVHFSDDFWKSMVRIKSVE 828
Query: 693 TKKSVIHLLLKLSNGWR--PKKRNVDSVCGSSLHIIKQFKVEGFY-IICTIDIVKE-SQY 748
V LL KLS+GWR + N +++ G+ L +++ +KV ++ +++I+KE S Y
Sbjct: 829 IHNKVFCLLEKLSSGWRRPDNEANPNTINGTCLQLLELYKVTKILNLVWSVEILKEDSNY 888
Query: 749 FQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTA 802
QVLKVWDILP+E PK ARL+N++ ++HCK K +EGNLEVP TW A
Sbjct: 889 IQVLKVWDILPMERTPKQAARLENLFGNKRVIDMDHCKFKCVEGNLEVPMTWPA 942
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 12/180 (6%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
E C LCS S+ V N P +SS LNDSQ AVLSC+ C H+ +I+ IWGPPGTG
Sbjct: 221 EECALCS--SDSVSNSE--PMVSSFDLNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTG 276
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTV+ LL L +MK RT+ C PTN+A+ + R+V LV++S E + LGDIL
Sbjct: 277 KTKTVATLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGT-----YGLGDIL 331
Query: 122 LLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L GN +R+K+D + +++LD+RVK LA+CF+P +GW H SM+ L++ +Y TY+
Sbjct: 332 LFGNGKRMKIDDHRDLHDVFLDFRVKILANCFSPRSGWKHSLESMICLLEDPKEMYSTYL 391
>gi|218195424|gb|EEC77851.1| hypothetical protein OsI_17107 [Oryza sativa Indica Group]
Length = 1011
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/676 (42%), Positives = 398/676 (58%), Gaps = 58/676 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ AV C+ + + I+LIWGPPGTGKTKT+S LL ++L RTL C PTN
Sbjct: 296 LNNSQLNAVADCV-LVSEKISSPIKLIWGPPGTGKTKTISALLWVMLHSGHRTLTCAPTN 354
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV--DSGVEEIYLDYRVK 145
A+ E+A+R+VKLV ES + L +I+L GN +R+K+ D + ++L R +
Sbjct: 355 TAVLEVASRIVKLVHESPASSGQ-----YLSNIVLFGNKKRMKIGEDHDLSVVFLSSRTE 409
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSL-YHTYIDNESMKQSEDINGDIIKEKECGKEA 204
RL+ CF + GW+HC S++DFL+ V+ Y Y MK +
Sbjct: 410 RLSQCFESMKGWNHCLCSLIDFLEIPVTKKYKWYTVQMKMKGPNSV-------------- 455
Query: 205 DVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFE 264
+ P EFV+D+ + + CT P+ + +F M ++ L+
Sbjct: 456 ------VLPLKEFVKDKCNELLEDFYYFMEILCTDFPRNSTMRQSFQYMNEVVEPLNILH 509
Query: 265 TLLFEDNLVSEELEEL-LSHSVDEGLSKSI------------VGIKYLLHKRRSECHFVL 311
L+ ++ + L L + G S + V K + K R C +L
Sbjct: 510 ALINVNDDNDDNLWFDDLLNGKGHGDSDPLKWPDLLASVHTDVCNKSKIRKARLLCVQIL 569
Query: 312 RKLQSSFNELNLPSAVEKDLLED----LLKSFCLKRASLFLSTASSSYMLHSVAME---- 363
R L+ + L LP L +D ++ + L+R L T SSSY+LH+V+M+
Sbjct: 570 RYLKIN---LKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVSSSYVLHNVSMDDRSE 626
Query: 364 ---PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
PL LV+DEAAQLKE E+ IP+QL GIK AV GDECQLPA+V+SK+S+ A FGRS+
Sbjct: 627 CLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSV 686
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
FERLS LGY+KHLL+IQYRM P IS FP + FY+ KI D V ++Y++ L G M+GP
Sbjct: 687 FERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMFGP 746
Query: 481 YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
YSFINV GG E +H S +N +EV+ V+ I+ L++ + KL++G+VSPY+AQV
Sbjct: 747 YSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVR 806
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
AIQEK+G Y GF+VKV S+DGFQG EED+IIISTVRSN GS+GFL+N +R NVAL
Sbjct: 807 AIQEKIGKTYDMYDGFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNVAL 866
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRA+HCLWI+GN TL+ +SVW+ +V+DA R CFF A +DK L AI+ ELD+ +
Sbjct: 867 TRAKHCLWIVGNGTTLSNNRSVWQKVVNDAKHRGCFFEASEDKHLSNAIVNAVIELDDAE 926
Query: 659 ELLNPESRLFRSQRWK 674
L+ +S + R++
Sbjct: 927 NLVKMDSLQITNPRFQ 942
>gi|414591179|tpg|DAA41750.1| TPA: hypothetical protein ZEAMMB73_134729 [Zea mays]
Length = 1030
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/687 (41%), Positives = 399/687 (58%), Gaps = 71/687 (10%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
E FG LNDSQ AV C+ + +++LIWGPPGTGKTKT+ +L +L
Sbjct: 357 EKFG------LNDSQLHAVADCVLSAIDNRLPSLKLIWGPPGTGKTKTICTILWAMLMKG 410
Query: 78 FRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV--DSGV 135
RTL C PTN A+ E+A+R+V+LV+ C L DI+L G+ E++K+ + +
Sbjct: 411 LRTLTCAPTNTAVLEVASRIVRLVEHLHGSVCF------LNDIVLFGSKEKMKIGREDAL 464
Query: 136 EEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLY--HTYIDNESMKQSEDINGD 193
++LD R KRL CF P TGW HC S++D L++ ++ Y H ++ K+ E G
Sbjct: 465 SMVFLDSRAKRLLPCFMPTTGWMHCLRSLMDHLESPITQYRLHLEKLLKNEKKKESNKGG 524
Query: 194 IIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVM 253
+ + + I PF +F + F ++ LR C+ P+ +F M
Sbjct: 525 -------SRATQGTIIRIPPFKDFFKGYFNKVSNLLRKCVETMYNDHPRSPETGHSFQCM 577
Query: 254 ATLISLLDSFETLLF--EDNLVSEELE--------------ELLSHSVDEGLSKSIVGIK 297
++ L+ + L+ D++ S+E E L+H V SK K
Sbjct: 578 LEVLELIGILQELINCKNDDIWSDEFHDCKIEDDGDPILWSEQLAH-VRSNTSK-----K 631
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
+ L RS C +R+L+ L LP K +E ++ L+RA L T SSS+ L
Sbjct: 632 HKLKLARSLC---VRELRYLHKNLELPGYSSKRSVE----TYLLQRAKCILCTVSSSFRL 684
Query: 358 HSVAMEP-----------------LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
++V M+ L+ L++DEAAQLKE E+ IPLQL GI+ AV GDE
Sbjct: 685 YNVPMDSSCTDIHSLLKGPETFKLLDMLIVDEAAQLKECETLIPLQLPGIRQAVFVGDEY 744
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QLPA+V SK+S+ A FGRS+FERLS LGY K+LL++QYRMHP IS FP + FY+ K+ D
Sbjct: 745 QLPALVRSKISDGANFGRSVFERLSSLGYGKYLLNVQYRMHPEISRFPVATFYDGKLSDG 804
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAW 518
V SYE+ FL ++GPYSFINV GGRE +H S +N VEV+ V++I+ L+K
Sbjct: 805 PNVTSMSYERTFLASKVFGPYSFINVDGGRETTEKHGTSLKNTVEVAAVLRIVQRLFKES 864
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ + KLS+G+VSPY+AQV AI +K+G Y GF+VKV S+DGFQG EED++IISTVR
Sbjct: 865 VSTGCKLSVGVVSPYNAQVRAICQKVGESYNAHDGFSVKVKSVDGFQGAEEDVLIISTVR 924
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
SN GS+GFL+N +R NVALTRA+HCLWI+GN TL+ KSVW+ +V DA R C+F A
Sbjct: 925 SNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGATLSSSKSVWQKIVKDARDRGCYFEAS 984
Query: 639 DDKDLGKAILAVKKELDELDELLNPES 665
DD DL A++ E D+ D L+ ES
Sbjct: 985 DDGDLSNAVVKAIIEQDDADNLVRMES 1011
>gi|222629429|gb|EEE61561.1| hypothetical protein OsJ_15909 [Oryza sativa Japonica Group]
Length = 889
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/645 (43%), Positives = 386/645 (59%), Gaps = 51/645 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVILL-----QMKF 78
LNDSQA A+ SC+ ++ + +T LIWGPPGTGKTKT+S+LL++L+ Q ++
Sbjct: 252 LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRY 311
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN AI ++A+R++ L K+ A GD+LL GN +R+ +D ++E+
Sbjct: 312 RVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEV 368
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
+LD RVK L CF+P +GW H +S+ FL ++L YI +
Sbjct: 369 FLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYI------------------Q 410
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
C + D P FVR RF I L C + +PK I + N++ + L +
Sbjct: 411 AC---IALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTT 467
Query: 259 LLDSFETLLFEDNLVSEEL--EELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQS 316
+L++F LL +++ +E+ + +G +V + + R+S +L + +
Sbjct: 468 MLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDGGVVHSDLVRNLRQSMTQ-ILGVIST 526
Query: 317 SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQL 376
L LP+ +K FCL+ ASL T S S L+ + ++ L+IDEAAQL
Sbjct: 527 LLRGLQLPATTS----PFKIKKFCLRSASLIFCTVSGSAKLYE---QKMDLLLIDEAAQL 579
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSI 436
KE ES IPLQ+SG+KHAVL GDECQLPA V+SK ++ A GRSLFERL+ LG+ KHLL++
Sbjct: 580 KECESLIPLQVSGLKHAVLIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQKHLLNM 639
Query: 437 QYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH 496
QYRMHPSIS FPN FY+ KI D V +E+ FL G M+GPYSFIN+ GRE+ +
Sbjct: 640 QYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGREDPGRN 699
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
RNM EV+ + KIL NL KA + + E +S+GI+ PY+AQV AIQ + + V V
Sbjct: 700 K-RNMAEVAAIKKILHNLCKACVGTGEGVSVGIICPYAAQVEAIQSGIDANAVRP--LDV 756
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+V S+DGFQG EED+II+STVRSN+ GSIGFLSN +R NVALTRARHCLWILG+A TL
Sbjct: 757 RVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLG 816
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKEL--DELDE 659
SVW LV DA R+CF++ DD G +L V + DELD+
Sbjct: 817 SGSVWGELVRDAVDRRCFYDWDDG---GAGLLGVARRGHEDELDD 858
>gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa Japonica Group]
Length = 890
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/645 (43%), Positives = 386/645 (59%), Gaps = 51/645 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVILL-----QMKF 78
LNDSQA A+ SC+ ++ + +T LIWGPPGTGKTKT+S+LL++L+ Q ++
Sbjct: 253 LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRY 312
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN AI ++A+R++ L K+ A GD+LL GN +R+ +D ++E+
Sbjct: 313 RVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEV 369
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
+LD RVK L CF+P +GW H +S+ FL ++L YI +
Sbjct: 370 FLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYI------------------Q 411
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
C + D P FVR RF I L C + +PK I + N++ + L +
Sbjct: 412 AC---IALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTT 468
Query: 259 LLDSFETLLFEDNLVSEEL--EELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQS 316
+L++F LL +++ +E+ + +G +V + + R+S +L + +
Sbjct: 469 MLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDGGVVHSDLVRNLRQSMTQ-ILGVIST 527
Query: 317 SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQL 376
L LP+ +K FCL+ ASL T S S L+ + ++ L+IDEAAQL
Sbjct: 528 LLRGLQLPATTS----PFKIKKFCLRSASLIFCTVSGSAKLYE---QKMDLLLIDEAAQL 580
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSI 436
KE ES IPLQ+SG+KHAVL GDECQLPA V+SK ++ A GRSLFERL+ LG+ KHLL++
Sbjct: 581 KECESLIPLQVSGLKHAVLIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQKHLLNM 640
Query: 437 QYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH 496
QYRMHPSIS FPN FY+ KI D V +E+ FL G M+GPYSFIN+ GRE+ +
Sbjct: 641 QYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGREDPGRN 700
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
RNM EV+ + KIL NL KA + + E +S+GI+ PY+AQV AIQ + + V V
Sbjct: 701 K-RNMAEVAAIKKILHNLCKACVGTGEGVSVGIICPYAAQVEAIQSGIDANAVRP--LDV 757
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+V S+DGFQG EED+II+STVRSN+ GSIGFLSN +R NVALTRARHCLWILG+A TL
Sbjct: 758 RVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLG 817
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKEL--DELDE 659
SVW LV DA R+CF++ DD G +L V + DELD+
Sbjct: 818 SGSVWGELVRDAVDRRCFYDWDDG---GAGLLGVARRGHEDELDD 859
>gi|356537819|ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 925
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 304/695 (43%), Positives = 400/695 (57%), Gaps = 54/695 (7%)
Query: 3 ETCELC-SMQSEGVWNETFGPSL-SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
E C+LC S ++ V + + S LN SQ +AV+SC+ C H TI+LIWGPPGT
Sbjct: 227 ENCQLCFSGENHSVACSSVQNIIRSQNLNQSQKEAVVSCVTSRECHHNDTIKLIWGPPGT 286
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
GKTKTV+ LL LL++K RTL C PTN A+ E+AAR+ LV E++E D F GDI
Sbjct: 287 GKTKTVASLLFSLLKLKARTLACAPTNTAVLEVAARLQNLVMETLECDT-----FGFGDI 341
Query: 121 LLLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTY 178
++ GN R+KVDS + +++LDYRV L C +GW H SM+ ++ Y +Y
Sbjct: 342 VVFGNKSRMKVDSYRCLNDVFLDYRVDNLLKC----SGWKHSLESMIKLIEYPKQQYDSY 397
Query: 179 IDNE--SMKQSEDINGD----------------IIKEKECGKEA-----DVSDVEIKPFL 215
E S+K E+ + KE C +E D IK
Sbjct: 398 KREEENSLKSLEEFAKQKYFNEKHDDHLTLEQFLKKESTCIEEQYLLYKDHKRKNIKTME 457
Query: 216 EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSE 275
++ R + L + T +P I + M + LL S E L +D
Sbjct: 458 QYFMQRLRSNREQLEEYMRTLHTHLPTSLIPLEEIKKMPVALDLLSSLENSLSKDKF--- 514
Query: 276 ELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDL 335
+ S ++G +SI+ L + EC LR L + + N+ E
Sbjct: 515 ---KQTSDGCEDG--ESILDCLGRLSIKNEECLVKLRSLSQTISLPNITDKYE------- 562
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+ FCL A L TA+SS L + M P+ FLVIDEAAQLKE ESTIPLQL G+ H +L
Sbjct: 563 MAKFCLMSARLIFCTAASSTKLFADGMTPVEFLVIDEAAQLKECESTIPLQLPGLHHVIL 622
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPA+V+S+VS EA +GRSLFERL LG+ KHLL++QYRMHPSIS FPN FYE
Sbjct: 623 IGDEKQLPAVVKSQVSQEAEYGRSLFERLVSLGHKKHLLNVQYRMHPSISLFPNKEFYEK 682
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLN 513
++ DS VR+ SY + FL G MY YSFIN+ G+E+ H +NMVE + V KI+ +
Sbjct: 683 QLSDSPFVREVSYNRHFLEGKMYDSYSFINIAKGKEKMPRGGHGWKNMVEAAAVCKIIES 742
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLI 572
L + + +K+SIGI+SPY+AQV IQE++ + V+ F+V V S+DGFQGGEED+I
Sbjct: 743 LENEFFSTGKKVSIGIISPYNAQVYEIQERITRQNLVSDPNFSVSVRSVDGFQGGEEDII 802
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
IISTVRSN G IGFL N +R NVALTRAR+CLWILGN TL+ S+W LV+DA R
Sbjct: 803 IISTVRSNKNGKIGFLDNRQRANVALTRARYCLWILGNENTLSSDYSLWRNLVNDAKERG 862
Query: 633 CFFNADDDKDLGKAILAVKKELDELDELLNPESRL 667
CF NADDDK L KAI ++ LDE +P +L
Sbjct: 863 CFHNADDDKKLAKAIEEESLLIELLDEYESPFKKL 897
>gi|357460653|ref|XP_003600608.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355489656|gb|AES70859.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 897
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 286/673 (42%), Positives = 396/673 (58%), Gaps = 83/673 (12%)
Query: 1 VDETCELC-SMQSEGVWNETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
V E C C S + + G + S LND+Q + VLSC+ C HK T++LIWGPP
Sbjct: 224 VGENCAQCFSSERHSIDTSRLGAVIRSFDLNDAQEEGVLSCIAARECSHKNTVKLIWGPP 283
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG 118
GTGKTKT S LL LL+ + RTL C PTNVA+ EL +R ++LV +S+ D L + LG
Sbjct: 284 GTGKTKTASSLLFALLKRRCRTLTCAPTNVAVLELTSRFIRLVMKSL-----DYLTYGLG 338
Query: 119 DILLLGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYH 176
DI+L GN +R+K+D+ + I+LDYR L+ CFAPL+GW H + L+N YH
Sbjct: 339 DIVLFGNRKRMKIDNDDDLFVIFLDYRANILSKCFAPLSGWKHHLELVTYLLENPEKQYH 398
Query: 177 TYIDNESMKQSEDINGDIIKEKE------------------------------------- 199
Y+ ++ + E N D +KE++
Sbjct: 399 EYLSSDVKRDYEVDNYDCLKEEKELLATADQQANQEKKDTYSQDRNVCKQNEWKGIVNKT 458
Query: 200 ------CGKEADVSDV---EIKPFL------------EFVRDRFKCIAAPLRSCIFNFCT 238
C KE + S E K FL EFV+ F I +R+ + CT
Sbjct: 459 LRENRLCFKEGNKSKYDKQEKKDFLYYENRIKRLTFHEFVKKEFNFIRTQMRTFAVHMCT 518
Query: 239 RIPKCYIGKDNFHVMATLISLLD---SFETLLFEDNLVSEELEELLSHSVDEGLSKSIVG 295
+P +I + V+ +L LD FET+L +++ + + L+ S D+ S
Sbjct: 519 HLPTSFI---SLRVVKSLFECLDWLKVFETVLSNNSITEQGFKLALATSCDDECKISSCN 575
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY 355
+Y L R EC L++L+S + L LP + E +KSFC K + + TASSS
Sbjct: 576 WQYKLGMTRKEC---LKRLKSLRDLLILPDFFD----EYSIKSFCFKTSRMIFCTASSSS 628
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
L+S ++ L LVIDEAAQLKE E+ IPLQL G++H VL GDE QLPA+V+S++S++A
Sbjct: 629 RLYSEGLDRLEMLVIDEAAQLKECEANIPLQLPGLRHVVLIGDEKQLPALVKSEISDKAG 688
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
FGRSLFERL LG+ KHLL++QYRMHPSIS FPN FY+N++ DS +V++++YEK FL
Sbjct: 689 FGRSLFERLVLLGHKKHLLNVQYRMHPSISLFPNMQFYDNQLVDSPSVKEKNYEKHFLSA 748
Query: 476 PMYGPYSFINVFGGREEFIEHSC-RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
M+ +SFI+V G +E E S RNMVEV+VV I+LNLYK + K+ +S+G++SPY
Sbjct: 749 DMFKSFSFIDVAFGEDELDEGSSRRNMVEVAVVSGIVLNLYKESVSRKQTVSVGVISPYK 808
Query: 535 AQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
AQVVAIQ+ L ++ GF+VKV ++DGFQGGEED+IIISTVR N+ G +GF+SN +
Sbjct: 809 AQVVAIQDTLDKRFGGDVNDGFSVKVSTVDGFQGGEEDVIIISTVRHNSMGVVGFISNIQ 868
Query: 593 RVNVALTRARHCL 605
R NV+LTRAR+ L
Sbjct: 869 RTNVSLTRARYVL 881
>gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis thaliana]
Length = 701
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/628 (42%), Positives = 386/628 (61%), Gaps = 34/628 (5%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+LSCL+ C+HK +++LIWGPPGTGKTKTV+ LL LL++ +T+VC
Sbjct: 76 SAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVCA 135
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDY 142
PTN AI E+ +R++ L K S + LG+I+L GN R+ + + +++LD
Sbjct: 136 PTNTAIVEVTSRLLSLFKTSSSEHST----YGLGNIVLSGNQARMGIKENDVLLDVFLDE 191
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGK 202
R+ L F+P +GW S++DFL+N + Y Y+ +K+ E ++ + K+K+
Sbjct: 192 RIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYV--HLLKEVERMSEEAEKKKKG-A 248
Query: 203 EADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
+ ++I F EFV+ F + L + + T +PK +I +N M T L
Sbjct: 249 DKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKALQR 308
Query: 263 FETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN 322
L E+ + + L G+S + C +LR L F
Sbjct: 309 VRYFLKENFSRDDFKKGSLKFDCFNGVS--------------AYCLQILRLLPERFEV-- 352
Query: 323 LPSAVEKDLLEDL-LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
D+LE+ K+FCL+ A + TAS + ++ + ++ LV+DEAAQLKE ES
Sbjct: 353 ------SDMLENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECES 406
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
LQLSG++HAVL GDE QLPAMV +++ +A FGRSLFERL LG++KHLL++QYRMH
Sbjct: 407 VAALQLSGLRHAVLIGDELQLPAMVHNEICEKAKFGRSLFERLVLLGHNKHLLNVQYRMH 466
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
PSIS FPN FY +I+D++ V++ Y+KRFL G M+G +SFINV G EEF + HS +N
Sbjct: 467 PSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKN 526
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG-FAVKVM 559
MVEV+V+ +I+ NL+K + + K+S+G+VSPY QV AIQE+ +KY + +G F + V
Sbjct: 527 MVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVR 586
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
S+DGFQGGEED+IIISTVRSN G +GFL+N +R NVALTRARHCLW++GN TL S
Sbjct: 587 SVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGS 646
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAI 647
W L+ ++ CF++A D+K+L A+
Sbjct: 647 SWAKLISESRTLGCFYDAADEKNLRDAM 674
>gi|356551976|ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
Length = 975
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 291/693 (41%), Positives = 407/693 (58%), Gaps = 88/693 (12%)
Query: 5 CELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTK 64
C+ C + + + P S LN+SQ A+ SCL CDH T +LIWGPPGTGKTK
Sbjct: 289 CQNCKCRKSVIPVCKWYPLRSQNLNESQEVAISSCLTM--CDHMVT-KLIWGPPGTGKTK 345
Query: 65 TVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
T++ LL LL+++ RTL C PTN A+ E+AAR+ LV S+ D + LGDI+L G
Sbjct: 346 TLACLLRCLLRVRHRTLACAPTNTAVLEVAARLRNLVNGSLGFDT-----YGLGDIVLFG 400
Query: 125 NNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNE 182
N R+KVDS G+ +++LD+RV+ L+ CF PL+GW H SM+ L++ Y +Y +
Sbjct: 401 NKSRMKVDSYTGLRDVFLDHRVQNLSKCFDPLSGWKHYLESMIQLLEDPKEQYSSYEKEK 460
Query: 183 SMKQSEDI-----------------------NGDIIKEKECGKEADVSD----------- 208
+ +D II E K D+ +
Sbjct: 461 GIVSFKDFVMQNYPSFGLQFHASKEGWELQSTDSIITEYVMQKRKDIVEQFLLDQQKKKK 520
Query: 209 --VEIKPFL--------------EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHV 252
+ ++ FL +F+ +RF AA L + T +PK ++ +
Sbjct: 521 NMMTMEQFLLHQQEKKKNMMTMEQFIVERFGEFAAKLMFFMQILYTHLPKSFLSLEVVMK 580
Query: 253 MATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLR 312
M ++ +L S E+ +L+ +L +E K+I+ +C +LR
Sbjct: 581 MFSVKDILTSLES----------KLKLILCGCKEE---KNIIDC---FQSSSGKCLSMLR 624
Query: 313 KLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDE 372
+ S+ + L + ++ FCL+ AS+ L TAS S L++ M P+ +++IDE
Sbjct: 625 SVSSAIPNTDF-------LAKGGIEKFCLQNASIILCTASGSIKLYAEDMTPIKYVIIDE 677
Query: 373 AAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH 432
AAQLKE ES IPL+L G+KH +L GDE QLPA+V+SK++ +A FGRSLFERL LG SKH
Sbjct: 678 AAQLKECESVIPLKLPGLKHIILVGDEKQLPALVKSKIAEKADFGRSLFERLVLLGDSKH 737
Query: 433 LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE 492
+L++QYRMHPSIS FP S FY+ KI D V +RSY +RFL G MYG YSFINV G+E+
Sbjct: 738 MLNVQYRMHPSISLFPFSEFYDEKISDGPNVLERSYNERFLEGEMYGSYSFINVSKGKEQ 797
Query: 493 FIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY-- 548
F +S +NMVE +V+ +I+ +L K ++ S++K+SIGI+SPY+AQV I+EK+ KY
Sbjct: 798 FGRGGYSSKNMVEAAVISEIIRSLKKEYLRSRKKVSIGIISPYNAQVYEIKEKV-EKYNS 856
Query: 549 VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWIL 608
V+ F+ V S+DGFQGGEED+IIISTVRSN G +GFLSN +R NVALTRAR+CLWI+
Sbjct: 857 VSFPDFSFSVRSVDGFQGGEEDIIIISTVRSNGSGKVGFLSNRQRANVALTRARYCLWII 916
Query: 609 GNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
GNA TL SVW +V DA R CF+NA+DDK
Sbjct: 917 GNATTLVNSDSVWRKVVLDAKIRDCFYNAEDDK 949
>gi|15240114|ref|NP_198530.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006763|gb|AED94146.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 692
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/628 (42%), Positives = 384/628 (61%), Gaps = 38/628 (6%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+LSCL+ C+HK +++LIWGPPGTGKTKTV+ LL LL++ +T+VC
Sbjct: 71 SAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVCA 130
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDY 142
PTN AI E+ +R++ L K S + LG+I+L GN R+ + + +++LD
Sbjct: 131 PTNTAIVEVTSRLLSLFKTSSSEHST----YGLGNIVLSGNQARMGIKENDVLLDVFLDE 186
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGK 202
R+ L F+P +GW S++DFL+N + Y Y+ +K+ E ++ + K+K+
Sbjct: 187 RIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYV--HLLKEVERMSEEAEKKKKG-A 243
Query: 203 EADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
+ ++I F EFV+ F + L + + T +PK +I +N M T L
Sbjct: 244 DKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKALQR 303
Query: 263 FETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN 322
L E+ + + L G+S + C +LR L F
Sbjct: 304 VRYFLKENFSRDDFKKGSLKFDCFNGVS--------------AYCLQILRLLPERFEV-- 347
Query: 323 LPSAVEKDLLEDL-LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
D+LE+ K+FCL+ A + TAS + ++ + ++ LV+DEAAQLKE ES
Sbjct: 348 ------SDMLENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECES 401
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
LQLSG++HAVL GDE QLPAMV NEA FGRSLFERL LG++KHLL++QYRMH
Sbjct: 402 VAALQLSGLRHAVLIGDELQLPAMVH----NEAKFGRSLFERLVLLGHNKHLLNVQYRMH 457
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
PSIS FPN FY +I+D++ V++ Y+KRFL G M+G +SFINV G EEF + HS +N
Sbjct: 458 PSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKN 517
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG-FAVKVM 559
MVEV+V+ +I+ NL+K + + K+S+G+VSPY QV AIQE+ +KY + +G F + V
Sbjct: 518 MVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVR 577
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
S+DGFQGGEED+IIISTVRSN G +GFL+N +R NVALTRARHCLW++GN TL S
Sbjct: 578 SVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGS 637
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAI 647
W L+ ++ CF++A D+K+L A+
Sbjct: 638 SWAKLISESRTLGCFYDAADEKNLRDAM 665
>gi|10177999|dbj|BAB11372.1| unnamed protein product [Arabidopsis thaliana]
Length = 880
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/643 (42%), Positives = 386/643 (60%), Gaps = 59/643 (9%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L CL C HK +++LIWGPPGTGKTKTV+ LL LL+++ +T+VC
Sbjct: 250 STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCA 309
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV---DSGVEEIYLD 141
PTN AI ++A+R++ L KE+ + + LG+I+L GN +R+ + D + +++LD
Sbjct: 310 PTNTAIVQVASRLLSLFKEN---STSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLD 366
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLY--HTYIDNESMKQSEDINGDIIKEKE 199
R+ +L F+P +GW S++ FL+N Y H Y E + E+ +
Sbjct: 367 ERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMEEEAERQEVV--- 423
Query: 200 CGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL 259
V I EFV+ F ++ + +CI + T +PK Y+ D+ +M
Sbjct: 424 ---------VNIPTIGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQS 474
Query: 260 LDSFETLLFEDNLVSEELEELLSHSVD--EGLSKSIVGIKYLLHKRRS-ECHFVLRKLQS 316
L L E+ S VD EG ++ KR S +C LR L
Sbjct: 475 LQRIRYFLREN-----------SSRVDFEEG------NFRFDCFKRLSVDCLKALRLLPK 517
Query: 317 SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQL 376
F +P +E ED+ K FCL+ A + L TAS + ++ + LV+DEAAQL
Sbjct: 518 RFE---IPDMLEN---EDIRK-FCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQL 570
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN---------EACFGRSLFERLSYL 427
KE ES LQL G++HA+L GDE QLPAMV ++ N +A FGRSLFERL L
Sbjct: 571 KECESVAALQLPGLRHAILIGDEFQLPAMVHNEYCNMGIMWQMCEKAKFGRSLFERLVLL 630
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G++KHLL +QYRMHPSIS FPN FY +I+D+ V++ Y+KRFL G M+G +SFINV
Sbjct: 631 GHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVG 690
Query: 488 GGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G+EEF + HS +NMVEV+VV +I+ NL+K + + K+S+G+VSPY Q+ AIQEK+G
Sbjct: 691 RGKEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGD 750
Query: 547 KYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
KY + +G F + V S+DGFQGGEED+IIISTVRSN+ G +GFL+N +R NVALTRARHC
Sbjct: 751 KYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHC 810
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
LW++GN TL S+W L+ ++ R CF++A D+ +L A+
Sbjct: 811 LWVIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAM 853
>gi|15242273|ref|NP_200022.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|10177744|dbj|BAB11057.1| unnamed protein product [Arabidopsis thaliana]
gi|332008787|gb|AED96170.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 676
Score = 481 bits (1238), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/632 (42%), Positives = 386/632 (61%), Gaps = 46/632 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L CL C HK +++LIWGPP TGKTKTV+ LL LL+++ +T+VC
Sbjct: 55 STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCA 114
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERL---KVDSGVEEIYLD 141
PTN AI ++ +R++ L KE+ + + LG+I+L GN +R+ K D + +++LD
Sbjct: 115 PTNTAIVQVTSRLLSLFKEN---STAENATYRLGNIILSGNRDRMGINKNDHVLLDVFLD 171
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECG 201
R+ +L F+P +GW S++ FL+N Y ++ +++ E +N +
Sbjct: 172 ERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHV--YELEEVERMNEE-------- 221
Query: 202 KEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLD 261
E + V I F EFV+ F ++ +++CI + T +PK Y+ ++ M L
Sbjct: 222 DEREEVVVNIPTFGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQ 281
Query: 262 SFETLLFEDNLVSEELEELLSHSVD--EGLSKSIVGIKYLLHKRRSE-CHFVLRKLQSSF 318
L E+ S VD EG ++ KR S+ C LR L F
Sbjct: 282 RIRYFLREN-----------SSRVDFEEG------NFRFDCFKRLSDDCLKALRLLPKRF 324
Query: 319 NELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKE 378
+P +E ED+ K FCL+ A + L TAS + ++ + LV+DEAAQLKE
Sbjct: 325 E---IPDMLEN---EDIRK-FCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKE 377
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQY 438
ES LQL G++HA+L GDE QLPAMV +++ +A FGRSLFERL LG++KHLL +QY
Sbjct: 378 CESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQY 437
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHPSIS FPN FY +I+D+ V++ Y+KRFL G M+ +SFINV G+EEF + HS
Sbjct: 438 RMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHS 497
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FA 555
+NMVEV+V+ +I+ NLYK + + K+S+G+VSPY Q+ AIQEK+G KY + +G F
Sbjct: 498 PKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFT 557
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
+ V S+DGFQGGEED+IIISTVRSN G +GFL+N +R NVALTRARHCLW++GN TL
Sbjct: 558 LNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 617
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
S+W L+ ++ R CF +A D+ +L A+
Sbjct: 618 LSGSIWATLISESRTRGCFHDATDEMNLRDAM 649
>gi|218184942|gb|EEC67369.1| hypothetical protein OsI_34480 [Oryza sativa Indica Group]
Length = 1437
Score = 477 bits (1228), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/662 (40%), Positives = 391/662 (59%), Gaps = 52/662 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ AV SC+ C H +++ LIWGPPGTGKT TVS++L +LL + R L C PTN
Sbjct: 368 LNDSQLDAVASCISASECCHNSSVGLIWGPPGTGKTTTVSVMLHMLLMKEQRILACAPTN 427
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
+A+ ++A+R+++L+++ C + GDI+L GN +RL + + ++YLD RV +L
Sbjct: 428 MAVLQVASRLIELIQDFSSSHC-----YSFGDIVLFGNKDRLHIGKELSKVYLDDRVHKL 482
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADVS 207
F GW S++ FL NC+S Y +D ++Q+ ++
Sbjct: 483 LRYFKREDGWKARVDSVMKFLMNCISRYQMSLD---IQQASSDGCNLT------------ 527
Query: 208 DVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLL 267
F ++ +F + L +CI F +P +G+ N M SLLD + LL
Sbjct: 528 ------FKKYFTSKFSTLVKELATCIDTFFDHLPTDSLGR-NLDRMMFAKSLLDKLQQLL 580
Query: 268 FEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE-LNLPSA 326
D+ VS+EL + DE + + H + + L S ++ L + S
Sbjct: 581 CADD-VSDELLFTIFKPSDEPIDS------FDSHDQTDDATVDLHDHDISLDDPLEIKSL 633
Query: 327 VEKDLL------------EDLLKSFCLKRASLFLSTASSSYMLHSVA-MEPLNFLVIDEA 373
K L+ E ++ CLKRA L TASSS+ L + + P++ LVIDEA
Sbjct: 634 CIKTLMDLSKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEA 693
Query: 374 AQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL 433
AQLKE E+ +PL L GI+H +L GDE QL ++V+SK++ +A FGRSL+ERL +GY KHL
Sbjct: 694 AQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHL 753
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L +QYRMHP I+ FPN+ FY+N+I D +V++ Y K +L GP+YG YSFI++ E
Sbjct: 754 LEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFIHIENDMEML 813
Query: 494 IE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
E S +NMVEV+V I+ L K + +++ S+G++SPY+AQV+A+QE+LG ++ N
Sbjct: 814 DELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNH 873
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
+V V SIDGFQGGEED+I+ISTVRSN G +GFLS++ R+NVALTRA++CLWILGN
Sbjct: 874 EFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNG 933
Query: 612 RTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQ 671
TL S+W LVHD+ R CFFNA DDK+L + I+ KE ++ ++ + +
Sbjct: 934 ATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQ--REQRSAHNAN 991
Query: 672 RW 673
RW
Sbjct: 992 RW 993
>gi|359490546|ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
Length = 1095
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 269/585 (45%), Positives = 370/585 (63%), Gaps = 31/585 (5%)
Query: 220 DRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEE 279
+RF + L+ T +P +I + V+ ++ LD + E L+E
Sbjct: 508 ERFDFVGEQLKLFTEALYTHLPTSFI---SLEVVKDMVRALD-----------LLERLKE 553
Query: 280 LLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF 339
+L D G ++ L+ R EC L+ L+ ++ LP+ +D +K F
Sbjct: 554 VLHECEDVGKCADLLP---ELYSTREEC---LQSLKCLCKKITLPNF----YTDDKIKKF 603
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
CL++A L TASSS L M P+ LVIDEAAQLKE ESTIPLQ+SG++HA+L GDE
Sbjct: 604 CLEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRHAILVGDE 663
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA+V+SK+S +A FGRSLFERL L + HLL+IQYRMHPSIS FPN FYEN+I D
Sbjct: 664 MQLPALVKSKISEKAGFGRSLFERLVLLKHEYHLLNIQYRMHPSISFFPNKEFYENQISD 723
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
+ V+ RSYEK+FL G MYGPYSF+NV G+EEF HS RNMVEV+VV +++ +L+K +
Sbjct: 724 APNVKDRSYEKQFLQGSMYGPYSFVNVAYGKEEFENHSSRNMVEVAVVSEVVTSLFKESV 783
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGGEEDLIIISTV 577
K+K+S+G++SPY AQV+AIQEKLG Y F+VKV ++DGFQGGEED+IIISTV
Sbjct: 784 SKKQKVSVGVISPYKAQVIAIQEKLGKIYNTDEERDFSVKVCTVDGFQGGEEDVIIISTV 843
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
R N G +GFLS +R NV+LTRARHCLWI G + TL +VW+ +V DA R CF+NA
Sbjct: 844 RGNEKGLVGFLSKRQRANVSLTRARHCLWIFGESETLVASGTVWKRVVEDAKERGCFYNA 903
Query: 638 DDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSV 697
+K+L +A+ E +LD+L + S LF RWKV FS+ F +S + + K V
Sbjct: 904 SAEKNLAQAMAISLVEQGQLDDLHDIASLLFGKARWKVFFSDEFWESMVSIFNTEVHKEV 963
Query: 698 IHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEG-FYIICTIDIVKESQY-FQVLKVW 755
+ LL KLS GWR K RN ++ G +++ Q+ V G F ++ ++DI+++ Y Q+LKV
Sbjct: 964 VSLLEKLSRGWRLKDRNFYTIHG---NLLVQYNVIGQFNLLWSVDILEDDSYCIQILKVC 1020
Query: 756 DILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTW 800
DI+ + + V +L +++ YT + I CK K +EG LEVP W
Sbjct: 1021 DIVSFRETSRAVKQLCSLFENYTDDRIQRCKFKRLEGKLEVPMIW 1065
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 8 CSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVS 67
C + S G +++ S LN SQ AVLSCL C H+ +++LI GPPGTGKT TV
Sbjct: 230 CKICSSGSVSDSVARINSFKLNRSQKAAVLSCLATANCHHQNSVELIKGPPGTGKTNTVG 289
Query: 68 MLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
LL LL MK RTL C PTN+A+ E+AARV+ LV+ES+E D + LGDI+L G++E
Sbjct: 290 SLLCALLGMKCRTLACAPTNIAVLEVAARVLSLVEESLEYDA-----YGLGDIVLFGSSE 344
Query: 128 RLKV--DSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMK 185
+ + DS + +++LD R + L CFA +GW HC SM++ L+ Y+++ + K
Sbjct: 345 GMNIDDDSDLHDVFLDTRARILVRCFARHSGWKHCLESMINLLEGTKEDRILYMEDRTNK 404
Query: 186 QS 187
+
Sbjct: 405 DN 406
>gi|222613192|gb|EEE51324.1| hypothetical protein OsJ_32291 [Oryza sativa Japonica Group]
Length = 1402
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/662 (40%), Positives = 390/662 (58%), Gaps = 52/662 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ AV SC+ C H +++ LIWGPPGTGKT TVS++L +LL + R L C PTN
Sbjct: 333 LNDSQLDAVASCISASECCHNSSVGLIWGPPGTGKTTTVSVMLHMLLMKEQRILACAPTN 392
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
+A+ ++A+R+++L+++ C + GDI+L GN +RL + + ++YLD RV +L
Sbjct: 393 MAVLQVASRLIELIQDFSSSHC-----YSFGDIVLFGNKDRLHIGKELSKVYLDDRVHKL 447
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADVS 207
F GW S++ FL NC+S Y +D ++Q+ ++
Sbjct: 448 LRYFKREDGWKARVDSVMKFLMNCISRYQMSLD---IQQASSDGCNLT------------ 492
Query: 208 DVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLL 267
F ++ +F + L CI F +P +G+ N M SLLD + LL
Sbjct: 493 ------FKKYFTSKFSTLVKELARCIDTFFDHLPTDSLGR-NLDRMMFAKSLLDKLQQLL 545
Query: 268 FEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE-LNLPSA 326
D+ VS+EL + DE + + H + + L S ++ L + S
Sbjct: 546 CADD-VSDELLFTIFKPSDEPIDS------FDSHDQTDDATVDLHDHDISLDDPLEIKSL 598
Query: 327 VEKDLL------------EDLLKSFCLKRASLFLSTASSSYMLHSVA-MEPLNFLVIDEA 373
K L+ E ++ CLKRA L TASSS+ L + + P++ LVIDEA
Sbjct: 599 CIKTLMDLSKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEA 658
Query: 374 AQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL 433
AQLKE E+ +PL L GI+H +L GDE QL ++V+SK++ +A FGRSL+ERL +GY KHL
Sbjct: 659 AQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHL 718
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L +QYRMHP I+ FPN+ FY+N+I D +V++ Y K +L GP+YG YSFI++ E
Sbjct: 719 LEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFIHIENDMEML 778
Query: 494 IE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
E S +NMVEV+V I+ L K + +++ S+G++SPY+AQV+A+QE+LG ++ N
Sbjct: 779 DELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNH 838
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
+V V SIDGFQGGEED+I+ISTVRSN G +GFLS++ R+NVALTRA++CLWILGN
Sbjct: 839 EFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNG 898
Query: 612 RTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQ 671
TL S+W LVHD+ R CFFNA DDK+L + I+ KE ++ ++ + +
Sbjct: 899 ATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQ--REQRSAHNAN 956
Query: 672 RW 673
RW
Sbjct: 957 RW 958
>gi|357491663|ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517454|gb|AES99077.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 860
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 278/648 (42%), Positives = 387/648 (59%), Gaps = 68/648 (10%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S LN+SQ AV S + C+H + ++LIWGPPGTGKTKTV+ LL LL++K RTL C
Sbjct: 257 SQKLNESQEDAVSSSANMINCNH-SNVKLIWGPPGTGKTKTVACLLFSLLELKTRTLTCA 315
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--GVEEIYLDY 142
PTN A+ ++A R+ +LV +S+E + + LGDI+L GN++R+K+ S G+ +I+LD
Sbjct: 316 PTNTAVLQVAIRLHRLVMDSLELET-----YGLGDIVLFGNSKRMKLSSHPGLVDIFLDN 370
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGK 202
RV+ L CF GW SM+ L + K+ + I K+K
Sbjct: 371 RVENLKRCFDSNIGWETNLRSMIRLLKSMEKFTLR-------KKYRAVFAFIYKQK---- 419
Query: 203 EADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
FV R K L+ + T +PK +I + M + LL S
Sbjct: 420 --------------FVEQREK-----LKLLMQTLYTHMPKSFISLETVKKMLQALDLLRS 460
Query: 263 FETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN 322
G+S + RR EC L+ L S + ++
Sbjct: 461 L------------------------GISLCFPAYIQAFYVRRDEC---LKVLSSLSDTIS 493
Query: 323 LPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESEST 382
LP ++D + + +FCL A L TASSS L++ + P+ FLVIDEAAQLKE EST
Sbjct: 494 LPKFDKRDNMRVEVGNFCLSNACLIFCTASSSVKLYTAEVSPIQFLVIDEAAQLKECEST 553
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHP 442
IPLQLSG+++ +L GDE QLPA+V+SK++++ FGRS+FERL LGY +H+L+IQYRMHP
Sbjct: 554 IPLQLSGLRNCILIGDERQLPALVKSKIADKCEFGRSMFERLVILGYKRHMLNIQYRMHP 613
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF--IEHSCRN 500
SIS FP FY+ K+ D+ V++ SY K FL G MY YSFIN+ G+E+ S +N
Sbjct: 614 SISLFPCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEKLGHCGQSLKN 673
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS-KYVNSAGFAVKVM 559
MVEV+V+ +++ +L K ++ +K+K+SIGI+SPY+AQV IQEK+ + ++ F+V V
Sbjct: 674 MVEVAVISEMIKSLNKVFMRTKKKVSIGIISPYNAQVNEIQEKVKQYTWDTTSDFSVNVR 733
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
S+DGFQGGEED+IIISTVRSN G++GFLSN +R NVA+TRAR+CLWILGNA TL S
Sbjct: 734 SVDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNAATLINSDS 793
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRL 667
VW +V DA R CF NA +DK+L +AI V E+ L+ +P +L
Sbjct: 794 VWRNVVLDAKRRDCFHNAVEDKNLARAINDVLFEIKLLEGSESPFMKL 841
>gi|297805252|ref|XP_002870510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316346|gb|EFH46769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 818
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 272/626 (43%), Positives = 390/626 (62%), Gaps = 44/626 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+LSCL+ C HK +++LIWGPPGTGKTKTV+ LL LL++K +T+VC
Sbjct: 199 SAKLNSSQEAAILSCLKTRNCIHKHSVKLIWGPPGTGKTKTVATLLFCLLKLKCKTVVCA 258
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDY 142
PTN AI E+ +R + L KE+ + + LG+I+L GN R+ + + +++LD
Sbjct: 259 PTNTAIVEVTSRPMSLFKETSSPEHST---YGLGNIVLSGNRARMGIKENDVLLDVFLDE 315
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGK 202
R+ LA+ F+P +GW S+++FL+N + Y Y+D +K+ E + +E K
Sbjct: 316 RIGILANLFSPTSGWKQRLESLINFLENTEAKYEHYVD--LLKEVETM------REEAEK 367
Query: 203 EADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
+A V+I F EFV+ F + L I + T +PK ++ + M +L
Sbjct: 368 KAKA--VKILTFGEFVKKTFDGFSEELEKNIVDLYTHLPKSFVSSEQVESMVAARQVLQR 425
Query: 263 FETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRS-ECHFVLRKLQSSFNEL 321
L E+ + + +G G K+ KR S +C LR L F E+
Sbjct: 426 VRYFLQEN---------FSRYDLKKG------GFKFDCFKRISADCVQTLRLLPQRF-EI 469
Query: 322 NLPSAVEKDLLEDL-LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
+ DLLE+ K+FCL+ A + TAS + ++ V ++ LV+DEAAQLKE E
Sbjct: 470 S-------DLLENKDTKTFCLQNADIIFCTASGAADMNPVRTGSIDLLVVDEAAQLKECE 522
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
S LQLSG++HAVL GDE QLPAM+ ++ +A FG SLFERL LG++KH L++QYRM
Sbjct: 523 SVAALQLSGLRHAVLIGDELQLPAMMW-QICEKAKFGSSLFERLVLLGHNKHFLNVQYRM 581
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCR 499
HPSIS FPN FY KI+D++ V++ Y+KRFL G M+G +SFINV G EEF + HS +
Sbjct: 582 HPSISRFPNKEFYGGKIKDAANVQESIYQKRFLQGNMFGSFSFINVGLGEEEFGDGHSPK 641
Query: 500 NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAVK 557
NMVEV+V+ +I+ +L+K + + K+S+G+VSPY QV AIQE+ +KY + +G F +
Sbjct: 642 NMVEVAVISEIISSLFKVSSERRIKMSVGVVSPYKGQVRAIQERTKNKYSSLSGELFTLN 701
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
V S+DGFQGGEED+IIISTVRSN G +GFL+N +R NVALTRARHCLW++GN TL
Sbjct: 702 VRSVDGFQGGEEDVIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVVGNETTLALS 761
Query: 618 KSVWEALVHDANARQCFFNADDDKDL 643
S+W L+ ++ R CF++A D+K+L
Sbjct: 762 GSIWAKLISESRTRGCFYDATDEKNL 787
>gi|297801236|ref|XP_002868502.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
gi|297314338|gb|EFH44761.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/639 (40%), Positives = 370/639 (57%), Gaps = 70/639 (10%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+LSCL HK +++LIWGPPGTGKTK VS LL LL+++ +T+VC
Sbjct: 230 STNLNSSQKSAILSCLETRNSKHKNSVKLIWGPPGTGKTKMVSTLLSALLKLRCKTVVCA 289
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERL--KVDSGVEEIYLDY 142
PTN A+ E+ +R++ L K S E + LG+I+L GN+ R+ K D + ++LD+
Sbjct: 290 PTNTAVVEVTSRLLALSKTSSEHAS-----YGLGNIVLAGNHNRMGIKNDDDLRNVFLDH 344
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGK 202
R+ F GW F S++ FL+N
Sbjct: 345 RISSFQKLFLSPYGWKQRFESVIHFLEN-------------------------------- 372
Query: 203 EADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
++ E K +++FV+ +F ++ L + + CT +PK I ++ M L
Sbjct: 373 ----TEAEFKEYVQFVKKKFNGLSEGLEKDMVDLCTHLPKSLISSNDVKKMIEARQALHR 428
Query: 263 FETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN 322
L E++ + +G K I+ + +C L + F
Sbjct: 429 VRYFLQENSSTFDS---------KKGSFKRIISV---------DCIQALSLIPKRFK--- 467
Query: 323 LPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESEST 382
+P E E+ ++ FCL+ A + TAS + ++ + FLV+DEAAQLKE ES
Sbjct: 468 VPELFEN---EEDIRKFCLQNADIIFCTASGAAEMNGERTGNVEFLVVDEAAQLKECESV 524
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHP 442
LQL G++HAVL GDE QLPAMV + +A FGRSLFERL LG+SKHLL +QYRMHP
Sbjct: 525 AALQLQGLRHAVLLGDEFQLPAMVHNDECEKAKFGRSLFERLVTLGHSKHLLDVQYRMHP 584
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNM 501
SI FPN FY +I+D++ V++ YEKR+L G M+G +SFINV G+EEF + HS +NM
Sbjct: 585 SIISFPNKEFYGGRIKDAANVQESIYEKRYLQGNMFGSFSFINVGHGKEEFGDGHSPKNM 644
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAVKVM 559
VEV+V+ +IL NL+K + K +S+G+++PY QV AIQ+++ KY + +G F + V
Sbjct: 645 VEVAVISEILSNLFKVSSERKINMSVGVITPYKGQVRAIQDRIIDKYSSLSGELFTLNVR 704
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
S+DGFQGGEED+IIISTVRSN +GFLSN +R NVALTRARHCLW++GN TL R S
Sbjct: 705 SVDGFQGGEEDVIIISTVRSNCNRKVGFLSNRQRANVALTRARHCLWVIGNETTLARSGS 764
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+W LV D+ R+CF++A DDK L A+ ++D+ D
Sbjct: 765 IWAKLVRDSKRRKCFYDAKDDKRLRDAMNDALLKVDKSD 803
>gi|242051270|ref|XP_002463379.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
gi|241926756|gb|EER99900.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
Length = 989
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 277/688 (40%), Positives = 388/688 (56%), Gaps = 81/688 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LNDSQ AV C+ + +++LIWGPPGTGKTKT+S +L +L RTL C PTN
Sbjct: 327 LNDSQLNAVADCVSSAIENRSPSLKLIWGPPGTGKTKTISTILWAMLMKGLRTLTCAPTN 386
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV--DSGVEEIYLDYRVK 145
A+ E+A+R+V+LV++S D L DI+L GN E++K+ + + ++LD R +
Sbjct: 387 TAVLEIASRIVRLVEQS-----SDGSVCFLNDIVLFGNKEKMKIRHEDDLSMVFLDSRAE 441
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN--ESMKQSEDINGDIIKEKECGKE 203
RL CF P TGW HC S++D L+N ++ Y +++ E ++ E + K+ C K
Sbjct: 442 RLLPCFMPCTGWMHCLRSLIDHLENPITSYRLHVEKILEDERKKESAKKNTCKDGIC-KA 500
Query: 204 ADVSD----------------VEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGK 247
DV D V I PF ++ +D F LR I P+
Sbjct: 501 HDVGDNSARASCVLLSEPSAKVRIPPFEDYFKDYFNKATKKLREYIEIMYNDHPRNPETG 560
Query: 248 DNFHVMATLISLLDSFETLL-----------FEDNLVSEELEELLSHSVDEGLSKSIVGI 296
+F M ++ L++ + L+ F D + ++ +L S +S
Sbjct: 561 HSFQCMLEVLELIEILQKLINYKNNDVWSDEFHDCNIEDDGNPIL-WSEQLARVRSNTSK 619
Query: 297 KYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYM 356
KY RS C LR L + L LP ++ L L+R L T SSS+
Sbjct: 620 KYKFKLARSLCVQELRYLHKN---LELPHYYSMRSIQIYL----LQRTKCILCTVSSSFR 672
Query: 357 LHSVAM------------EP-----LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L++V + +P L+ L++DEAAQLKE E+ IPLQL GI+ AV GDE
Sbjct: 673 LYNVPLGNPSTDICSLLKKPEKFKFLDMLIVDEAAQLKECETLIPLQLPGIRQAVFIGDE 732
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA+V+SK+S+ A FGRS+FERLS LG+ KHL FY+ KI +
Sbjct: 733 YQLPALVKSKISDSANFGRSVFERLSLLGHEKHLP-----------------FYDGKISN 775
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKA 517
V +SY++ FL ++GPYSFINV GG E +H S +N VEV+ V++I+ L+K
Sbjct: 776 GPNVTSKSYDRMFLASKIFGPYSFINVDGGHETTEKHGQSLKNTVEVAAVVRIVQRLFKE 835
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ ++ KLS+G+VSPY+AQV AI EK+G Y GF+VKV S+DGFQG EED+IIISTV
Sbjct: 836 SVSTRSKLSVGVVSPYNAQVRAIHEKVGKSYNTYDGFSVKVKSVDGFQGAEEDIIIISTV 895
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
RSN GS+GFL+N +R NVALTRA+HCLWI+GN TL+ KSVW+ +V DA R C+F A
Sbjct: 896 RSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSVWQKVVKDARDRGCYFEA 955
Query: 638 DDDKDLGKAILAVKKELDELDELLNPES 665
DDKDL A++ ELD+++ L+ ES
Sbjct: 956 SDDKDLSNAVVKAIIELDDVENLVKMES 983
>gi|302143702|emb|CBI22563.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/484 (51%), Positives = 330/484 (68%), Gaps = 8/484 (1%)
Query: 333 EDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
+D +K FCL++A L TASSS L M P+ LVIDEAAQLKE ESTIPLQ+SG++H
Sbjct: 459 DDKIKKFCLEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRH 518
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
A+L GDE QLPA+V+SK+S +A FGRSLFERL L + HLL+IQYRMHPSIS FPN F
Sbjct: 519 AILVGDEMQLPALVKSKISEKAGFGRSLFERLVLLKHEYHLLNIQYRMHPSISFFPNKEF 578
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILL 512
YEN+I D+ V+ RSYEK+FL G MYGPYSF+NV G+EEF HS RNMVEV+VV +++
Sbjct: 579 YENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNVAYGKEEFENHSSRNMVEVAVVSEVVT 638
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGGEED 570
+L+K + K+K+S+G++SPY AQV+AIQEKLG Y F+VKV ++DGFQGGEED
Sbjct: 639 SLFKESVSKKQKVSVGVISPYKAQVIAIQEKLGKIYNTDEERDFSVKVCTVDGFQGGEED 698
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+IIISTVR N G +GFLS +R NV+LTRARHCLWI G + TL +VW+ +V DA
Sbjct: 699 VIIISTVRGNEKGLVGFLSKRQRANVSLTRARHCLWIFGESETLVASGTVWKRVVEDAKE 758
Query: 631 RQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTS 690
R CF+NA +K+L +A+ E +LD+L + S LF RWKV FS+ F +S + +
Sbjct: 759 RGCFYNASAEKNLAQAMAISLVEQGQLDDLHDIASLLFGKARWKVFFSDEFWESMVSIFN 818
Query: 691 DPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEG-FYIICTIDIVKESQY- 748
K V+ LL KLS GWR K RN ++ G +++ Q+ V G F ++ ++DI+++ Y
Sbjct: 819 TEVHKEVVSLLEKLSRGWRLKDRNFYTIHG---NLLVQYNVIGQFNLLWSVDILEDDSYC 875
Query: 749 FQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVR 808
Q+LKV DI+ + + V +L +++ YT + I CK K +EG LE+ W R
Sbjct: 876 IQILKVCDIVSFRETSRAVKQLCSLFENYTDDRIQRCKFKRLEGKLEMI-NWKNMLTTER 934
Query: 809 FKNL 812
FK +
Sbjct: 935 FKRM 938
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 105/164 (64%), Gaps = 7/164 (4%)
Query: 8 CSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVS 67
C + S G +++ S LN SQ AVLSCL C H+ +++LI GPPGTGKT TV
Sbjct: 230 CKICSSGSVSDSVARINSFKLNRSQKAAVLSCLATANCHHQNSVELIKGPPGTGKTNTVG 289
Query: 68 MLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
LL LL MK RTL C PTN+A+ E+AARV+ LV+ES+E D + LGDI+L G++E
Sbjct: 290 SLLCALLGMKCRTLACAPTNIAVLEVAARVLSLVEESLEYDA-----YGLGDIVLFGSSE 344
Query: 128 RLKV--DSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLD 169
+ + DS + +++LD R + L CFA +GW HC SM++ L+
Sbjct: 345 GMNIDDDSDLHDVFLDTRARILVRCFARHSGWKHCLESMINLLE 388
>gi|224143928|ref|XP_002336092.1| predicted protein [Populus trichocarpa]
gi|222872079|gb|EEF09210.1| predicted protein [Populus trichocarpa]
Length = 1079
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/598 (45%), Positives = 369/598 (61%), Gaps = 49/598 (8%)
Query: 210 EIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFE 269
+I F EF++D F+ ++A L I T +P I + M + L + LL
Sbjct: 484 DILSFEEFLKDSFEFLSAKLDFLISGLFTHLPTSIISLEVVKNMIRAVDSLRCLKPLLCS 543
Query: 270 DNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEK 329
++ E L+++L D G S + G L R++C L L F+ +P+ E
Sbjct: 544 VSVGDEGLKQVLD-DFDNGGSSA--GQFSRLSFMRNDCIQTLNSLPRVFD---IPNIFEV 597
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
+ ++FCL A L TASSS LH+ +P+ LVIDEAAQLKE ESTIPLQLSG
Sbjct: 598 E--SKAARNFCLGNACLVFCTASSSAKLHTERAKPIKLLVIDEAAQLKECESTIPLQLSG 655
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPN 449
++HA+L GDE QLPAMV+SK+S EA FGRSLFERL L + KHLL+ QYRMHPSIS FPN
Sbjct: 656 LRHAILIGDERQLPAMVQSKISEEAKFGRSLFERLVILEHEKHLLNTQYRMHPSISLFPN 715
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVM 508
FY+ I+D+S V++R+Y+K+FL G MYGPYSFINV G+E+ + S +N+VEV+VV
Sbjct: 716 KEFYDMLIQDASNVKERNYQKQFLQGNMYGPYSFINVANGKEQSNDGRSKKNLVEVAVVS 775
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGE 568
I+ L+K + +++++SIG++SPY+AQV AIQ+K+G+ Y + FAV V S+DGFQG E
Sbjct: 776 AIVAGLFKEFKRARKRMSIGVISPYNAQVYAIQQKIGNTYSTFSDFAVNVRSVDGFQGSE 835
Query: 569 EDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
ED+IIISTVR N GS+GFLSN +R NVALTRAR+CLWILGN TL S+W+ LV DA
Sbjct: 836 EDVIIISTVRCNASGSVGFLSNRQRANVALTRARYCLWILGNGATLVNSGSIWKKLVTDA 895
Query: 629 NARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKL 688
R CF+NAD+DK L KAI+ ELD+LD+LLN LFR+ RW
Sbjct: 896 KERGCFYNADEDKSLSKAIMDALLELDQLDDLLNVNFLLFRNARW--------------- 940
Query: 689 TSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEG-FYIICTIDIVKESQ 747
KRN+ + G+S +++ ++V G +I T+DI+KE++
Sbjct: 941 -----------------------KRNIIVLHGTSSELLENYRVNGQLSLIWTVDIMKENK 977
Query: 748 Y-FQVLKVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATS 804
Q+LKVWD+L L D ++ LD + YT +N C+ K EG+L VP W+ +S
Sbjct: 978 NDTQILKVWDVLSLRDSLELARSLDAVVGNYTENKMNRCRHKCTEGDLVVPMRWSMSS 1035
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 110/166 (66%), Gaps = 7/166 (4%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
SS LN SQ A++SC+ C H++T++LIWGPPGTGKTK V +LL LL++K RTL C
Sbjct: 244 SSNLNFSQQDAIVSCIGLSECRHQSTVKLIWGPPGTGKTKMVGLLLFSLLKLKCRTLTCA 303
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVD--SGVEEIYLDY 142
PTN+A+ E+ +R+++LV +S+E + LGDI+L GN +R+K+ +E+I+LD+
Sbjct: 304 PTNIAVLEVTSRLLRLVTDSLEYKT-----YGLGDIVLFGNGKRMKISEKDDLEDIFLDH 358
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSE 188
RV+ L CF P TGW H S+++ L + Y Y++N+ K E
Sbjct: 359 RVEVLEYCFNPSTGWKHTVDSLINLLADPEHQYRRYLENKERKNEE 404
>gi|242076908|ref|XP_002448390.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
gi|241939573|gb|EES12718.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
Length = 895
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 276/660 (41%), Positives = 382/660 (57%), Gaps = 65/660 (9%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ + ++++LIWGPPGTG RTL C PTN
Sbjct: 278 LNTSQLNAVADCV-PVTGKFSSSVKLIWGPPGTG-----------------RTLACAPTN 319
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
A+ E+A+R+V LV E RD L L DI+L GN +R+K+D + I+L R +
Sbjct: 320 TAVLEVASRIVNLVHEFAAS--RDIL---LSDIVLFGNKKRMKIDEDHDLCTIFLSSRTQ 374
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
RL+ CFA WS +S+V FL+ V+ H ++ EK+
Sbjct: 375 RLSKCFAK-KPWSLYLSSLVHFLEKSVAEQHQLYTER-----------VLTEKQT----- 417
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFET 265
+ I P EFVR F +A L +C+ T P+ +F M + LL+ T
Sbjct: 418 ---LVILPLNEFVRATFNELAEDLFNCMEVLQTDFPRSPTMGQSFQCMTDVTELLNILHT 474
Query: 266 LLFEDN---LVSEELEELLSHSVDEGLSKSIVG-------IKYLLHKRRSECHFVLRKLQ 315
+ D+ + LEE + D ++ +K K RS C +++LQ
Sbjct: 475 YINSDDDDVWLDGLLEEQIKQDNDPAKWPDLLASVHAEECLKSKFRKARSLC---IQELQ 531
Query: 316 SSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAME----PLNFLVID 371
L LP + D D+ + + L++A L T SSS+ L++V ++ PL L++D
Sbjct: 532 YLSKHLELPFWIYYDYERDI-RMYLLQKARCILCTVSSSFSLYNVPVDKDTSPLQMLIVD 590
Query: 372 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK 431
EAAQLKE E+ IP+ L I+ AV GDECQLPA+V+SK+S A FGRS+FERLS L Y+K
Sbjct: 591 EAAQLKECETLIPMLLPSIRQAVFIGDECQLPALVKSKISENAYFGRSVFERLSSLEYNK 650
Query: 432 HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE 491
HLLS+QYRMHP IS FP + FY++K+ D V ++YE++FL G M+G YSFINV GG E
Sbjct: 651 HLLSVQYRMHPEISKFPVANFYDSKVSDGPNVVCKNYERKFLPGKMFGSYSFINVEGGHE 710
Query: 492 EFIEHS--CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYV 549
+HS +N +EV+ V+ I+ L++ + + KLS+G+VSPY+AQV AIQEKLG
Sbjct: 711 TTEKHSQSLKNTIEVAAVLWIVKRLFEESVLTGTKLSVGVVSPYNAQVRAIQEKLGKSCD 770
Query: 550 NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
GF+VKV S+DGFQG EED+II+STVRSN GS+GFL+N +R NVALTRA+HCLWI+G
Sbjct: 771 MYEGFSVKVKSVDGFQGAEEDIIIMSTVRSNGDGSVGFLTNLQRTNVALTRAKHCLWIVG 830
Query: 610 NARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFR 669
N TL + +SVW+ +V DA AR C F+A D+KDL A++ ELD+ D L +S R
Sbjct: 831 NVTTLAQSRSVWQRIVKDAMARGCLFDASDNKDLSNALVNAIIELDDSDNLARMDSLHIR 890
>gi|42566323|ref|NP_567301.2| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332657133|gb|AEE82533.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 689
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/614 (42%), Positives = 371/614 (60%), Gaps = 48/614 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L+CL K +++LIWGPPGTG TKTV+ LL LL + +T+VCT
Sbjct: 106 SANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCT 165
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE----IYL 140
PTN A+ +A+R++ L KES + + LG+I+L+GN R+ +D + ++L
Sbjct: 166 PTNTAVVAVASRLLALFKESSSTEHST---YGLGNIVLVGNRVRMGIDERGNDDLLNVFL 222
Query: 141 DYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI------DNESMKQSEDINGDI 194
D R+ +L + F+P W +++D L+N S Y Y+ +N+ K G+
Sbjct: 223 DDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYLLLSERKENQETKNILTAFGEF 282
Query: 195 IKEKECG-KEADVSDVEI-KPFLEFVRDRFKCIAAPLRSC---IFNFCTRIPKCYIGKDN 249
+ + G KE + EI F EFV ++F ++ ++ + + T +PK ++ ++
Sbjct: 283 VMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLSSND 342
Query: 250 FHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHF 309
M L T L E+ S + D +K + +C
Sbjct: 343 VKNMIVARQALRQARTFL---------QEKQGSFTFD-CFNKFVC----------VDCLR 382
Query: 310 VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLV 369
LR L F +P+ L+++ +++FCL+ A + TAS + + + ++ LV
Sbjct: 383 TLRLLSKRFE---IPAL----LMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLV 435
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
+DEAAQLKE ES LQL G+ HAVL GDE QLPAMV+S+V +A F RSLFERL LG+
Sbjct: 436 VDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGH 495
Query: 430 SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG 489
KHLL++QYRMHPSIS FPN FY KI D+ V++ +Y+KRFL G M+G +SFINV G
Sbjct: 496 KKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLG 555
Query: 490 REEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY 548
+EEF + HS +NMVE++VV +IL NL K ++K K+S+G++SPY AQV AIQE++G KY
Sbjct: 556 KEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKY 615
Query: 549 --VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLW 606
V+ F + V S+DGFQGGEED+IIISTVRSN G+IGFLSN +R NVALTRARHCLW
Sbjct: 616 TSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLW 675
Query: 607 ILGNARTLTRKKSV 620
++GN RTL+ S+
Sbjct: 676 VIGNERTLSLSGSI 689
>gi|302143701|emb|CBI22562.3| unnamed protein product [Vitis vinifera]
Length = 977
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/532 (47%), Positives = 341/532 (64%), Gaps = 19/532 (3%)
Query: 281 LSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFC 340
L +V + + +++ +K L R C LR L F+ L + E +KS C
Sbjct: 449 LKFNVMKNMVRALNLLKNLSDLRTEVCLQTLRSLGKMFSVPTLAN-------EYKIKSLC 501
Query: 341 LKRASL-FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
LK A L F + +SSS +LH M+ + LVIDEAAQLKE ESTIPLQ+SGI+HAVL GDE
Sbjct: 502 LKNAVLIFCTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHAVLVGDE 561
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA+V+SK F RSLFERL L + KHLL +QYRMHPSIS FPN+ FYE I +
Sbjct: 562 MQLPALVKSKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFYEGDIIN 621
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGG---REEF-IEHSCRNMVEVSVVMKILLNLY 515
+ V++ Y +RFLHG MYGP+SFINV EEF + HS +NMVEV+VV +I+ +L+
Sbjct: 622 APKVKEAIYSRRFLHGNMYGPFSFINVASTVPELEEFNVRHSSKNMVEVAVVSQIIASLF 681
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA--GFAVKVMSIDGFQGGEEDLII 573
+ KEK+S+GI+SPY AQV IQ+KLG Y A F++KV ++DGFQG EED+II
Sbjct: 682 EETKARKEKVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQGDEEDVII 741
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
ISTVR N+GG IGF+ N +R NV+LTRARHCLWI GNA+TL SVWE +V A ++C
Sbjct: 742 ISTVRCNSGGHIGFVKNYRRANVSLTRARHCLWITGNAKTLEDSHSVWEKVVQHAKGQRC 801
Query: 634 FFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPT 693
F+NA +D +L KA++ E LD + S+LFR+ RWKV F + F +S K+ +
Sbjct: 802 FYNAYEDTNLAKALIVCFLERYHLDGVHYMASQLFRNTRWKVFFDDKFWESMAKIMNTAV 861
Query: 694 KKSVIHLLLKLSNGWRPKKRNVDSVCGSSLHIIKQFKVEGFYIICTIDIVKE-SQYFQVL 752
K V+ LL KLS+GWRPK RN ++ G+ H+++ F+++ +DIV+E S Y QVL
Sbjct: 862 HKEVLSLLEKLSSGWRPKVRNPYAINGT--HLMQYIIKRQFHLLWAVDIVEENSCYIQVL 919
Query: 753 KVWDILPLEDVPKVVARLDNIYVKYTAEFINHCKEKSIEGNLEVPKTWTATS 804
KV++I+P + V L + K+T + IN CK S +G E P W S
Sbjct: 920 KVYNIVPSHETTGVTRDLCASFEKFTIDHINRCKYTSGQG--EAPMIWQMPS 969
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 112/213 (52%), Gaps = 29/213 (13%)
Query: 5 CELCSMQSEGVWNET--------FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWG 56
C LCS SE + T FG LN SQ +AVLSC+ C H+ +++LI G
Sbjct: 238 CALCSSGSEAFKSVTDLEDRIRSFG------LNLSQEEAVLSCISAAMCHHENSVKLIKG 291
Query: 57 PPGTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP 116
PPGTGKTKTV+ LL +L+MK RTL C PTN A+ R++ VK S+E +
Sbjct: 292 PPGTGKTKTVASLLFAVLKMKCRTLACAPTNTAVLLATERLLSFVKGSLENGT-----YG 346
Query: 117 LGDILLLGNNERLKVDSGVEE---IYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVS 173
+GDI+L G+ +++D +E I+LD R LA CFA +GW H SM+ L N
Sbjct: 347 MGDIVLFGSTRGMQIDDCDDELHDIFLDSRANILARCFAQGSGWKHSLESMITLLQNLEG 406
Query: 174 LYHTYIDN-------ESMKQSEDINGDIIKEKE 199
Y+ + N E KQ + G I EKE
Sbjct: 407 NYNLCLGNREDEGNEEQGKQGKLGKGIFIDEKE 439
>gi|5732068|gb|AAD48967.1|AF147263_9 contains similarity to nonsense-mediated mRNA decay trans-acting
factors [Arabidopsis thaliana]
gi|7267314|emb|CAB81096.1| AT4g05540 [Arabidopsis thaliana]
Length = 660
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/614 (42%), Positives = 369/614 (60%), Gaps = 48/614 (7%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L+CL K +++LIWGPPGTG TKTV+ LL LL + +T+VCT
Sbjct: 77 SANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCT 136
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE----IYL 140
PTN A+ +A+R++ L KES + + LG+I+L+GN R+ +D + ++L
Sbjct: 137 PTNTAVVAVASRLLALFKESSSTEHST---YGLGNIVLVGNRVRMGIDERGNDDLLNVFL 193
Query: 141 DYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI------DNESMKQSEDINGDI 194
D R+ +L + F+P W +++D L+N S Y Y+ +N+ K G+
Sbjct: 194 DDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYLLLSERKENQETKNILTAFGEF 253
Query: 195 IKEKECG-KEADVSDVEI-KPFLEFVRDRFKCIAAPLRSC---IFNFCTRIPKCYIGKDN 249
+ + G KE + EI F EFV ++F ++ ++ + + T +PK ++ ++
Sbjct: 254 VMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLSSND 313
Query: 250 FHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHF 309
M L T L E S + D +K + C
Sbjct: 314 VKNMIVARQALRQARTFLQEKQG---------SFTFD-CFNKFV-------------CVD 350
Query: 310 VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLV 369
LR L+ +P+ L+++ +++FCL+ A + TAS + + + ++ LV
Sbjct: 351 CLRTLRLLSKRFEIPAL----LMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLV 406
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
+DEAAQLKE ES LQL G+ HAVL GDE QLPAMV+S+V +A F RSLFERL LG+
Sbjct: 407 VDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGH 466
Query: 430 SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG 489
KHLL++QYRMHPSIS FPN FY KI D+ V++ +Y+KRFL G M+G +SFINV G
Sbjct: 467 KKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLG 526
Query: 490 REEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY 548
+EEF + HS +NMVE++VV +IL NL K ++K K+S+G++SPY AQV AIQE++G KY
Sbjct: 527 KEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKY 586
Query: 549 --VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLW 606
V+ F + V S+DGFQGGEED+IIISTVRSN G+IGFLSN +R NVALTRARHCLW
Sbjct: 587 TSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLW 646
Query: 607 ILGNARTLTRKKSV 620
++GN RTL+ S+
Sbjct: 647 VIGNERTLSLSGSI 660
>gi|414585753|tpg|DAA36324.1| TPA: hypothetical protein ZEAMMB73_446301 [Zea mays]
Length = 1465
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 277/677 (40%), Positives = 380/677 (56%), Gaps = 78/677 (11%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
E FG LNDSQ AV C+ M + ++I+L+WGPPGTGKTKT+S +L +L
Sbjct: 493 EKFG------LNDSQLNAVSDCVSLMDSN-SSSIKLLWGPPGTGKTKTISSILWAMLIKG 545
Query: 78 FRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--V 135
RTL C PTN A+ E+AAR+V L +S D F L DI+L GN +++K+D+ +
Sbjct: 546 RRTLACAPTNTAVLEIAARIVSLTVKS-----SDGTVF-LNDIVLFGNKKKMKIDNDYYL 599
Query: 136 EEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDII 195
++YL++R +RL CF TGW HC ++D L N V+ Y ++NE
Sbjct: 600 SKVYLNFRAERLLPCFKSNTGWRHCLCVLIDLLVNSVTKYQ--LNNED------------ 645
Query: 196 KEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMAT 255
K F + ++D + ++ L S I P+ +F M
Sbjct: 646 ----------------KTFKQHLKDDYNKLSRNLHSYITILYNDHPRNLETGQSFQCMLE 689
Query: 256 LISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECH------- 308
+ LL TL+ N +ELL +++E ++ + + L R + C+
Sbjct: 690 VRELLKILHTLINAGNGGDIWSDELLRSTIEEEVNPELWPSQ-LACIRTNSCNKSKFVAA 748
Query: 309 --FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAME--- 363
L++L + LP+ +D+ + + L R L + T SS+ L+++ M
Sbjct: 749 RSLCLQELIYLCKNMELPNCYSA---QDV-RLYLLSRTRLIICTVCSSFKLYNIPMRNSS 804
Query: 364 -PLNFLV-------------IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
L+ L+ IDEAAQLKE E+ IPLQL GI+HAVL GDE QLP++V+SK
Sbjct: 805 PSLHQLLNKPKILIPLELLIIDEAAQLKECETLIPLQLPGIRHAVLIGDEYQLPSLVKSK 864
Query: 410 VSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE 469
+S+ A FGRS+FERLS LGYSKHLL+IQYRMHP IS FP FY+ K+ D V + Y
Sbjct: 865 ISDSANFGRSVFERLSSLGYSKHLLNIQYRMHPDISRFPVGTFYDGKLSDGPNVSHKDYN 924
Query: 470 KRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
K FL G ++ PYSFIN+ G E E S +N +EV V+ I+ +L K + ++ KLSI
Sbjct: 925 KMFLAGKLFRPYSFINIDGSHETNEMHGRSLKNSLEVDAVVMIVQSLLKETLSTRSKLSI 984
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
G+V PY+AQV AIQEK+G F+VKV S+DGFQG EED+IIISTVRSN G++GF
Sbjct: 985 GVVCPYNAQVRAIQEKVGKPCRKYDYFSVKVKSVDGFQGAEEDIIIISTVRSNGAGTVGF 1044
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
LSN +R NVALTRA+HCLWI+GN TL SVW+ +V D R CFFNA D+K+L AI
Sbjct: 1045 LSNLQRTNVALTRAKHCLWIVGNGTTLFNSNSVWQKIVKDTRDRGCFFNATDEKELLNAI 1104
Query: 648 LAVKKELDELDELLNPE 664
E D L E
Sbjct: 1105 FKPAVEYPHADNLAKHE 1121
>gi|297809575|ref|XP_002872671.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318508|gb|EFH48930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 815
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/622 (41%), Positives = 366/622 (58%), Gaps = 53/622 (8%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+LSCL K +++LIWGPPGTGKTKTV+ LL LL + +T+VC
Sbjct: 223 SAKLNPSQESAILSCLETRNLRDKTSVKLIWGPPGTGKTKTVATLLFALLNLSCKTVVCA 282
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE----IYL 140
PTN A+ E+A+R++ L KE+ + + LG+I+L+GN R+ +D + ++L
Sbjct: 283 PTNTAVVEVASRLLALFKETSSSEHST---YGLGNIVLVGNRVRMGIDDRGNDDLLNVFL 339
Query: 141 DYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID-NESMKQSEDIN------GD 193
++R+ +L F+P TGW S++D L+N S Y Y+ NE + ED G+
Sbjct: 340 EHRISKLRKLFSPSTGWERSLESIIDILENSESNYKKYLLLNERREIKEDGKNILTTFGE 399
Query: 194 IIKEKECGKE------ADVSDVEIKPFLEFVRDRFKCIA---APLRSCIFNFCTRIPKCY 244
+ + G +I F EFV+ + ++ ++ + + T +PK +
Sbjct: 400 FVMKMFLGSNERSEKEEAEKKEKILTFGEFVKKNYYGLSETMGKVQKDMVDLYTHLPKSF 459
Query: 245 IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRR 304
++ M L + L E S ++ I
Sbjct: 460 TSSNDVKNMIAARKALRRARSFLQEKQ-----------GSFTFDCFNKVISI-------- 500
Query: 305 SECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEP 364
+C LR L F +P+ L+ + ++FCL+ A + TAS + + +
Sbjct: 501 -DCLQTLRLLSKRFE---IPAL----LVNEDTRTFCLQNAHIIFCTASGAAEMTAERTGS 552
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ LV+DEAAQLKE ES LQ+ G+ HAVL GDE QLPAMV+S+V +A FGRSLFERL
Sbjct: 553 IELLVVDEAAQLKECESVAALQIQGLHHAVLIGDELQLPAMVQSEVCEKAKFGRSLFERL 612
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG+ KHLL++QYRMH SIS FPN FY+ KI D+ V++ +Y+KRFL G M+G +SFI
Sbjct: 613 VLLGHKKHLLNVQYRMHTSISLFPNMEFYDGKISDAEIVKESTYQKRFLRGNMFGSFSFI 672
Query: 485 NVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
NV G+EEF + HS +NMVEV+VV +IL NL K ++K K+S+G++SPY AQV AIQE+
Sbjct: 673 NVGLGKEEFGDGHSPKNMVEVAVVSEILSNLLKVSSEAKTKMSVGVISPYKAQVRAIQER 732
Query: 544 LGSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+G KY V+ F + V S+DGFQGGEED+IIISTVR+N G IGFLSN +R NVALTRA
Sbjct: 733 IGDKYTSVSDQLFTLNVRSVDGFQGGEEDIIIISTVRNNGNGHIGFLSNRQRANVALTRA 792
Query: 602 RHCLWILGNARTLTRKKSVWEA 623
RHCLW++GN RTL+ S+ ++
Sbjct: 793 RHCLWVIGNERTLSLSGSIGQS 814
>gi|357491665|ref|XP_003616120.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517455|gb|AES99078.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 932
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 279/695 (40%), Positives = 386/695 (55%), Gaps = 99/695 (14%)
Query: 3 ETCELC----SMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
E C+LC QS + + S LN+SQ AV SC+ M C+H A I+LIWGPP
Sbjct: 293 ENCQLCPPEPDSQSSLIQEDVI--IRSQNLNESQEDAVSSCVSMMNCNH-ADIKLIWGPP 349
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG 118
GTGKTKTV+ LL LL+++ RTL C PTN AI ++A+R+ +LV +S+E D + LG
Sbjct: 350 GTGKTKTVACLLFSLLKLQTRTLTCAPTNTAILQVASRLNRLVMDSLEHDT-----YSLG 404
Query: 119 DILLLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYH 176
DI+L GN +R+ S G+ + +LDY V+ L +CF P TGW SM+ L
Sbjct: 405 DIVLFGNGKRMNFSSHQGLVKFFLDYHVENLMECFDPNTGWKTNLLSMIQLL-------- 456
Query: 177 TYIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNF 236
+SM EK K+ E K +FV+ + K L +
Sbjct: 457 -----KSM------------EKSANKKESSEVFEYKQ--KFVQQKEK-----LEFLMQTL 492
Query: 237 CTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGI 296
T +P I + M LL S + + + +SI
Sbjct: 493 YTHMPTSLISLEMVKKMLQAFDLLKSLGISIGQAKFKKRD--------------ESIPAY 538
Query: 297 KYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY- 355
LL+ +R EC +L L + + + + ++ FCL A L L T SSS
Sbjct: 539 FQLLYVKRDECLSILSSLSKTVSLPYFETDRRGGIKRVQVEKFCLSYACLVLCTVSSSIK 598
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
++H+ ++P+ FLV+DEAAQLKE E IPLQL G++ +L GDE QLPA+V+SK++++
Sbjct: 599 LIHASWLKPVQFLVVDEAAQLKECELAIPLQLHGLRRCILIGDERQLPALVKSKIADQCE 658
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
FGRS+FERL LGY + +L++QYRMHPSIS FP FY+ K+ D+ V + SY K FL G
Sbjct: 659 FGRSMFERLVMLGYERKMLNVQYRMHPSISLFPCKEFYDGKLCDAPVVGEESYNKLFLEG 718
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
MY YSFIN+ G+E+F S +NMVEV+V+ +I+ +LY+ ++ +++K+SIGIVSPY+
Sbjct: 719 EMYSSYSFINIAKGKEQFGHGQSLKNMVEVAVISEIIKSLYEVFMKTRKKVSIGIVSPYN 778
Query: 535 AQVVAIQEKLG--SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
AQV IQE++ +K NS F+V V S+DGFQGGEED+IIISTVR SN +
Sbjct: 779 AQVYEIQEEIEQYTKVANSK-FSVNVRSVDGFQGGEEDIIIISTVR----------SNGR 827
Query: 593 RVNVALTRA------------------------RHCLWILGNARTLTRKKSVWEALVHDA 628
R NVALTRA R+CLWILGNA TL SVW +V DA
Sbjct: 828 RTNVALTRARYDVYNVQFVMLFLCLLKTEFILCRYCLWILGNASTLINSGSVWRNVVIDA 887
Query: 629 NARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
R CF N ++DK L +AI V +L +L+E +P
Sbjct: 888 KKRDCFHNVEEDKKLSQAIKDVLPQLRQLEEFESP 922
>gi|357168352|ref|XP_003581605.1| PREDICTED: probable helicase senataxin-like [Brachypodium
distachyon]
Length = 787
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/675 (38%), Positives = 371/675 (54%), Gaps = 93/675 (13%)
Query: 2 DETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
D+ C +C LS LN SQ A+ S + +RC H +LIWGPPGTG
Sbjct: 197 DDICGICVKHDGDCLTSFTEQLLSINLNRSQVDAIESVISAIRCRHMDHTKLIWGPPGTG 256
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTVS LL +L +K RTL C PTNVA+ + AR ++ +K+ E + FPLGD+L
Sbjct: 257 KTKTVSALLWVLACLKCRTLTCAPTNVAVVGVCARFLQNLKDFNEHIDESSQPFPLGDVL 316
Query: 122 LLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN 181
L GN + + +E+++LD+RV L + F+ L+GW + AS++ ++C S Y +++
Sbjct: 317 LFGNKSNMDITEDLEDVFLDFRVDVLVESFSLLSGWKYRIASVISLFEDCASQYDMLLED 376
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIP 241
+ GK V L+F++ +F + L+ CI N +P
Sbjct: 377 D------------------GKSDPVC------LLDFIKKQFDVTSLALKRCIMNLWIHLP 412
Query: 242 KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG--LSKSIVGIKYL 299
+D ++ L+++L+ F LL + +L E L+ L E + + I+
Sbjct: 413 GRCFPRDK---VSKLLNMLEKFGVLLCDADLTDESLKRGLGCLSTENSVCVQPMSFIEKE 469
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L R C +L+ LQ S LNLP+ V+K ++ S+C++ A+L T SSSY LH
Sbjct: 470 LGGARFTCLKLLKDLQHS---LNLPTGVDKMWVQ----SYCMRNATLLFCTTSSSYRLHH 522
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+ + PL+ L++DEAAQ++E E IPL+L +KH VL GD+CQL AMV+S+V EA FG S
Sbjct: 523 MEIAPLDVLIVDEAAQVRECELVIPLRLHWLKHVVLVGDDCQLSAMVKSQVCKEAGFGTS 582
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LF RL L + K+LL+IQYRMHP IS FPN+ FYE KI D+ RKR+ + L +
Sbjct: 583 LFGRLVLLNFEKYLLNIQYRMHPCISSFPNAQFYERKILDA---RKRTGQG--LSIGVVS 637
Query: 480 PYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
PYS +QV A
Sbjct: 638 PYS----------------------------------------------------SQVDA 645
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
I+ +L Y GF V+V SIDGFQG E+D+II+STVRSN G +GFL++ +R NVALT
Sbjct: 646 IKRRLDKTYDKCDGFHVRVKSIDGFQGEEDDIIILSTVRSNGSGVVGFLADYQRTNVALT 705
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RARHCLWI+G+A TL + +VW LV DA R+C F+A DD + K +L VK+ELDELD+
Sbjct: 706 RARHCLWIVGHAHTLYKSGTVWTDLVADAQRRKCVFSATDDSAMCKLVLKVKQELDELDD 765
Query: 660 LLNPESRLFRSQRWK 674
LLN +S +F + RWK
Sbjct: 766 LLNADSVVFSNTRWK 780
>gi|242076912|ref|XP_002448392.1| hypothetical protein SORBIDRAFT_06g026440 [Sorghum bicolor]
gi|241939575|gb|EES12720.1| hypothetical protein SORBIDRAFT_06g026440 [Sorghum bicolor]
Length = 887
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 268/664 (40%), Positives = 392/664 (59%), Gaps = 72/664 (10%)
Query: 1 VDETCELCSMQSEGVWN--ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
V +TC+ S + G + E + + LN SQ AVL+ + +M C +T LIWGPP
Sbjct: 236 VPDTCQKKSTEDAGSIDSVEIWTKLSTMDLNTSQNDAVLNSISKMHC-KSSTFTLIWGPP 294
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKE-SVERDCRDALFFPL 117
GTGKTKT+S+LL ++ +MK TLVC PTN+AIK++A+R +K+++E SV+ C L
Sbjct: 295 GTGKTKTISVLLWLMREMKHGTLVCAPTNLAIKQVASRFLKVIQEHSVDTRC-------L 347
Query: 118 GDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHT 177
GD+LL+GN +R+ VD ++EIYL RV++L CFAPLTGW H +S+ +F +N S Y
Sbjct: 348 GDVLLIGNKQRMCVDGDLKEIYLHDRVRKLLGCFAPLTGWKHHLSSLSEFFENGYSQYLQ 407
Query: 178 YIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFC 237
++++ +E D PF + R RF I LR C
Sbjct: 408 HLED-------------------NQEGDT------PFFSYSRKRFASIYVDLRRCFKELL 442
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG--LSKSIVG 295
+PK I + N++ + +L+ +L+ F + F+ + + ++E+ + DE + S++
Sbjct: 443 LHVPKSSILEVNYNNILSLLEMLEEFNRM-FQWKYIGDAIKEVFLYINDEPDHTNSSVI- 500
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY 355
L K R +C L KL + + L LP K + D FC++ AS+ T S+S
Sbjct: 501 ---TLGKMRIKC---LEKLNTLLSCLKLPLISSKRTIRD----FCIESASIIFCTVSTST 550
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
+ + + L LV+DEAAQLKE E+ IPL+L +KHAVL GDECQLPA V+SKV +A
Sbjct: 551 KV--ITNKKLELLVVDEAAQLKECETLIPLRLWTLKHAVLIGDECQLPATVKSKVCTDAL 608
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
FGRSLFERLS LG+ KHLL++QYRMHPSIS FPNS FYE +I D+ ++ ++ +E+ +L
Sbjct: 609 FGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNSNFYEGRISDAPSLMEKVHERMYLPS 668
Query: 476 PMYGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILL-------NLYKAWIDSKEKLS 526
MYGPYSF+N+ GREE E HS RN VEV+V+ +IL +L+ +++K++
Sbjct: 669 SMYGPYSFVNIGDGREERDELGHSKRNFVEVAVIEEILYRLRRGTCSLFTTCFKTQKKVT 728
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
+G++ PY+AQVVAI+ K+G + VK+ S+DGFQGGEED+II+STVRSN+GG +
Sbjct: 729 VGVICPYTAQVVAIEGKIGK--IKFGPLQVKINSVDGFQGGEEDIIILSTVRSNSGGMVE 786
Query: 587 FLSNSKRVNVALTRARHCLWILGNART-------LTRKKSVWEALVHDANARQCFFNADD 639
S+S +N T + G+ + L R+ S E V D N +D
Sbjct: 787 MQSSSD-LNEQGTSSTSVSHYAGSPSSDIVLLSELQRQSSKKED-VEDITVIPTIPNKED 844
Query: 640 DKDL 643
DKD+
Sbjct: 845 DKDI 848
>gi|357140936|ref|XP_003572012.1| PREDICTED: uncharacterized protein LOC100831140 [Brachypodium
distachyon]
Length = 1373
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/627 (40%), Positives = 365/627 (58%), Gaps = 64/627 (10%)
Query: 64 KTVSMLLVILLQM------KFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPL 117
+ ++M I+L M K R L C PTN+A+ ++A+R++ L++ D +
Sbjct: 311 RGLTMDSRIILNMLGKNNHKQRILACAPTNMAVLQVASRLIGLIE-----DFSLKHHYSF 365
Query: 118 GDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHT 177
GDI+L GN +RL + + +IYLD RV +L CF GW HC S++ FL NC+S +
Sbjct: 366 GDIILFGNKDRLHIGKELSKIYLDDRVHKLLRCFKRENGWKHCVDSVLKFLTNCISRHRM 425
Query: 178 YIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFC 237
+D I+ G E +++ F ++ +F +A L +CI F
Sbjct: 426 SLD--------------IQPAGSG-ECNLT------FKKYFTSKFSSLAKELVACISTFS 464
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEEL-----------------EEL 280
+P +GK NF M L SLLD + LL D+ VS+EL +
Sbjct: 465 DHLPVDTLGK-NFDKMMFLKSLLDKMQHLLCADD-VSDELLFKIFKPSDKLPDPSTSHDD 522
Query: 281 LSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFC 340
L+ EGL + + L + +S C +L L +++ LP + + D+ C
Sbjct: 523 LADDATEGLPDLDISLDNPL-EIKSMCIKILMDL----SKMRLPCEDNESSIRDM----C 573
Query: 341 LKRASLFLSTASSSYMLHSV-AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
LK+A L TAS S+ L + ++ P++ LVIDEAAQLKESES +PL L GI+H +L GDE
Sbjct: 574 LKQAKLIFCTASGSFDLFRLQSVLPISILVIDEAAQLKESESLVPLLLPGIEHVLLIGDE 633
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QL ++V+SK++ + FGRSL+ERL + Y+KHLL +QYRMHP IS FPN+ FY N+I D
Sbjct: 634 NQLSSLVKSKIAKDVDFGRSLYERLCAMDYNKHLLEVQYRMHPCISKFPNAKFYGNRISD 693
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKA 517
S +V+K+ Y K +L GP+YG YSFI++ E + + S +NMVEV+V I+ L K
Sbjct: 694 SPSVKKKDYTKSYLPGPIYGSYSFIHIENDMEMLDDLGQSSKNMVEVAVAANIIERLAKE 753
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ S+G++SPY+AQV+A+QEKLG K+ +V V SIDGFQGGEED+I+ISTV
Sbjct: 754 CWKKSRRTSVGVISPYTAQVIALQEKLGRKFEKHEFLSVTVKSIDGFQGGEEDIILISTV 813
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
RSN G IGFLS++ R+NVALTRA+HCLWILGN TL S+W LV+D+ R CFF A
Sbjct: 814 RSNKDGKIGFLSDAGRINVALTRAKHCLWILGNGATLLASNSIWAELVNDSKRRGCFFEA 873
Query: 638 DDDKDLGKAI-LAVKKELDELDELLNP 663
DKDL + + L +K+ +D P
Sbjct: 874 RKDKDLAETMRLVMKRNGRRIDATGEP 900
>gi|21717153|gb|AAM76346.1|AC074196_4 putative helicase [Oryza sativa Japonica Group]
gi|31433282|gb|AAP54820.1| tRNA-splicing endonuclease positive effector, putative, expressed
[Oryza sativa Japonica Group]
Length = 1361
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/597 (39%), Positives = 350/597 (58%), Gaps = 50/597 (8%)
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN+A+ ++A+R+++L+++ C + GDI+L GN +RL + + ++
Sbjct: 343 RILACAPTNMAVLQVASRLIELIQDFSSSHC-----YSFGDIVLFGNKDRLHIGKELSKV 397
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
YLD RV +L F GW S++ FL NC+S Y +D ++Q+ ++
Sbjct: 398 YLDDRVHKLLRYFKREDGWKARVDSVMKFLMNCISRYQMSLD---IQQASSDGCNLT--- 451
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
F ++ +F + L CI F +P +G+ N M S
Sbjct: 452 ---------------FKKYFTSKFSTLVKELARCIDTFFDHLPTDSLGR-NLDRMMFAKS 495
Query: 259 LLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSF 318
LLD + LL D+ VS+EL + DE + + H + + L S
Sbjct: 496 LLDKLQQLLCADD-VSDELLFTIFKPSDEPIDS------FDSHDQTDDATVDLHDHDISL 548
Query: 319 NE-LNLPSAVEKDLL------------EDLLKSFCLKRASLFLSTASSSYMLHSVA-MEP 364
++ L + S K L+ E ++ CLKRA L TASSS+ L + + P
Sbjct: 549 DDPLEIKSLCIKTLMDLSKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMP 608
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++ LVIDEAAQLKE E+ +PL L GI+H +L GDE QL ++V+SK++ +A FGRSL+ERL
Sbjct: 609 ISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERL 668
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+GY KHLL +QYRMHP I+ FPN+ FY+N+I D +V++ Y K +L GP+YG YSFI
Sbjct: 669 CTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFI 728
Query: 485 NVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
++ E E S +NMVEV+V I+ L K + +++ S+G++SPY+AQV+A+QE
Sbjct: 729 HIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQE 788
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+LG ++ N +V V SIDGFQGGEED+I+ISTVRSN G +GFLS++ R+NVALTRA+
Sbjct: 789 RLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAK 848
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
+CLWILGN TL S+W LVHD+ R CFFNA DDK+L + I+ KE ++ ++
Sbjct: 849 YCLWILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQ 905
>gi|297805246|ref|XP_002870507.1| hypothetical protein ARALYDRAFT_355656 [Arabidopsis lyrata subsp.
lyrata]
gi|297316343|gb|EFH46766.1| hypothetical protein ARALYDRAFT_355656 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/631 (39%), Positives = 362/631 (57%), Gaps = 68/631 (10%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L CL +C+HK +++LIWGPPGTGKTKTV+ LL+ LL+++ +T+VC
Sbjct: 231 STKLNSSQEAAILGCLETRKCNHKNSVKLIWGPPGTGKTKTVATLLLSLLKLRCKTVVCA 290
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERL---KVDSGVEEIYLD 141
PTN AI ++A+R++ + KE+ + + LG+I+L GN +R+ K D + +++LD
Sbjct: 291 PTNTAIVQVASRLLSVFKENCSSE---HATYRLGNIVLSGNRDRMGINKNDHVLLDVFLD 347
Query: 142 YRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECG 201
R+ +L F+P +GW S++ FL+N Y ++ + +
Sbjct: 348 ERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMEEE---------- 397
Query: 202 KEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLD 261
E V I F EFV+ F ++ + + + T +PK YI + M L
Sbjct: 398 VERQEVVVNIPTFGEFVKKNFNSLSEEVDKRMVDLYTHLPKSYISSQDVKKMIASRQALQ 457
Query: 262 SFETLLFEDNLVSEELEELLSHSVD--EGLSKSIVGIKYLLHKR--RSECHFVLRKLQSS 317
L E+ S VD EG K+ KR +C LR L
Sbjct: 458 RVRYFLQEN-----------SSRVDFKEG------NFKFDCFKRLISVDCLAALRLLPKR 500
Query: 318 FNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLK 377
F +P +E ED+ K FCL+ A + L TAS + ++ + LV+DEAAQLK
Sbjct: 501 FE---IPDMLEN---EDIRK-FCLQNAHIILCTASGAAEMNPERTGNIELLVVDEAAQLK 553
Query: 378 ESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQ 437
E ES LQL G+ HA+L GDE QLPAMV +++ +A FGRSLFERL LG++KHLL +Q
Sbjct: 554 ECESVAALQLKGLHHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQ 613
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-H 496
YRMHPSIS FPN FY +I+D++ V++ Y+KRFL G M+G +SFINV G+EEF + H
Sbjct: 614 YRMHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGH 673
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S +NMVEV+V+ +I+ NL+K + + K+S+G+VSPY QV AIQE++G KY + +G
Sbjct: 674 SPKNMVEVAVISEIISNLFKVSSERRMKMSVGVVSPYKGQVRAIQERIGDKYSSLSG--- 730
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
++ + + S+GFLSN +R NVALTRARHCLW++GN TL
Sbjct: 731 QLFTFE--------------------CSVGFLSNRQRANVALTRARHCLWVIGNETTLAL 770
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAI 647
S W ++ ++ R CF++A D+K+L A+
Sbjct: 771 SGSFWAKMISESRTRGCFYDAADEKNLRDAM 801
>gi|410129750|dbj|BAM64829.1| hypothetical protein [Beta vulgaris]
Length = 1041
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/448 (49%), Positives = 297/448 (66%), Gaps = 19/448 (4%)
Query: 356 MLHSVAMEP-LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV-SNE 413
+L S+ M+ + +VIDEAAQLKE ES I LQ+ G+K A+L GD+ QLPAMV+S+V +
Sbjct: 535 LLSSIKMKSCVEMVVIDEAAQLKECESAISLQIPGVKTAILIGDDRQLPAMVQSEVLKKK 594
Query: 414 ACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFL 473
FGRSLFER+ LG KHLL+IQYRMHPSIS FPN FYENKI D+ V++ SY K FL
Sbjct: 595 INFGRSLFERMVRLGKKKHLLNIQYRMHPSISSFPNRQFYENKIVDAPNVKEISYVKNFL 654
Query: 474 HGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKA-WIDSKEKLSIGIVS 531
MYG YSFINV GG+E+F + HS RN+ E VV +I+ L+K + +K+K+S+G++S
Sbjct: 655 DKGMYGTYSFINVSGGKEDFKKGHSPRNLEEADVVDRIIAKLFKDFYCITKQKVSVGVIS 714
Query: 532 PYSAQVVAIQEKLGSKYV-NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
PY QV +QEKL KY + F + + S+DGFQGGEED+IIISTVR N GS+GFLSN
Sbjct: 715 PYKGQVGLLQEKLEKKYTKHKENFCINIRSVDGFQGGEEDIIIISTVRCNGNGSVGFLSN 774
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAV 650
+R NVALTRAR+CLWI+G+ TL SVW +LV DA R CF++ DD DL KA A
Sbjct: 775 CQRTNVALTRARYCLWIVGSGSTLGNSTSVWNSLVFDAKTRGCFYDVKDDIDLIKATPAG 834
Query: 651 KKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRP 710
K + +L RWKV FS +F S + S T+K V LL K+++GWR
Sbjct: 835 KTDFFGYLKL--------EKARWKVVFSNDFKISILSIKSVATQKRVKELLHKIADGWRQ 886
Query: 711 --KKRNVDSVC--GSSLHIIKQFKV-EGFYIICTIDIVKE-SQYFQVLKVWDILPLEDVP 764
++ V +V G++ +++Q+KV + + T+DIVK+ S Y QV+K+WD+LP +P
Sbjct: 887 SDSEKLVHAVTGYGAAYELLEQYKVADQLNLAWTVDIVKDNSHYTQVIKIWDVLPGFRIP 946
Query: 765 KVVARLDNIYVKYTAEFINHCKEKSIEG 792
+ L ++ KYT +F+N CK KS EG
Sbjct: 947 NLAKNLSILFEKYTVDFMNSCKYKSFEG 974
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 173/357 (48%), Gaps = 73/357 (20%)
Query: 1 VDETCELCS-------MQSEGVWN--ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKA-T 50
VD+ C C+ M+S ++N +FG L++SQ +A+LS + +C H+
Sbjct: 228 VDDECVNCNSEESCNVMRSSDMFNCLGSFG------LDESQKEAILSSISLRKCLHQEYK 281
Query: 51 IQLIWGPPGTGKTKTV-SMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC 109
++LIWGPPGTGKTKTV S+L VIL Q RTL C PTNVA+ ++A R+V L ES+
Sbjct: 282 VKLIWGPPGTGKTKTVASLLFVILKQRCCRTLTCAPTNVAVIQVAKRLVTLYLESLTYHT 341
Query: 110 RDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVKRLADCFAPLTGWSHCFASMVDF 167
+ LGDI+L GN +R+K+D E +++L YRV+ L +C PLTGW SM+
Sbjct: 342 -----YGLGDIVLFGNEKRMKIDDHYELVDVFLKYRVEILEECLKPLTGWRASLDSMMYL 396
Query: 168 LDNCVSLYHTYI--DNESMKQSEDING-----------------------DII------- 195
L + + Y+ YI D E+ + NG +II
Sbjct: 397 LSDPQARYNAYIAGDKETKIDKKAENGANVVATNVVKVDKERTTTTKKWKEIINKSMSEN 456
Query: 196 ----KEKECGKEAD-----------VSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRI 240
++K GKE D + +E+ F +F R++F +A L C N T +
Sbjct: 457 KKENRKKGKGKEQDGKTGDNEGDNEGTKMEVMTFEDFQRNKFCSVADRLVFCAENLYTHL 516
Query: 241 PKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIK 297
P + D M L+ LL S + + +V +E +L + +S I G+K
Sbjct: 517 PTSCLPLDVAKQMIRLVVLLSSIKMKSCVEMVVIDEAAQL--KECESAISLQIPGVK 571
>gi|222629428|gb|EEE61560.1| hypothetical protein OsJ_15908 [Oryza sativa Japonica Group]
Length = 738
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/593 (39%), Positives = 336/593 (56%), Gaps = 83/593 (13%)
Query: 78 FRTLVCTPTNVAIKELAARVVKLV------KESVERDCRDALFFPLGDILLLGNNERLKV 131
R C N A++ + + ++V KES +R C LGD+LL GN +R+ V
Sbjct: 162 IRIWRCLDYNTAVRRNQSLIQEMVHYPLVIKESSDRAC-------LGDVLLCGNKQRMCV 214
Query: 132 DSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDIN 191
D ++EIYL RV+ L CF P+TGW H +S+ D +N S Y Y++++
Sbjct: 215 DGNLKEIYLHDRVRTLLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQ--------- 265
Query: 192 GDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFH 251
KE D F + R RF LR C +PK I + N++
Sbjct: 266 ----------KEGDSLT-----FYSYTRKRFNATYPELRRCFKEVLFHVPKSTILEVNYN 310
Query: 252 VMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-----LHKRRSE 306
+ +L+ LL+ F N + +E++ + ++ D+ S K+ L K R
Sbjct: 311 NIISLLELLEDFNKKFMNKN-IEDEVKGIFLYNDDQSDSSVSSLTKFSKTAISLGKIRIR 369
Query: 307 CHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLN 366
C +L L SS L LP K + + FC++ AS+ T SSS + + ++
Sbjct: 370 CLELLNMLLSS---LKLPITSSKRTI----REFCMESASIVFCTVSSSSKISNKKLQ--- 419
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
LV+DEAAQLKE E IPL+L +KHA+L GDECQLPA V+SKV +A FGRSLFERLS
Sbjct: 420 LLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVCEDASFGRSLFERLSS 479
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG+ KHLL++QYRMHPSIS FPN FY+ K+ D+ V+++ + K++L G M+GPYSF N+
Sbjct: 480 LGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPGLMFGPYSFFNI 539
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
HS +K K+++G++ PY+AQV+AIQ+KLG
Sbjct: 540 EDA------HS----------------------KTKNKVTVGVICPYTAQVLAIQQKLGK 571
Query: 547 KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLW 606
+ VK+ S+DGFQGGEED+II+STVRSN+ G++GFLSN +R NV+LTRAR+CLW
Sbjct: 572 MKFDPV--IVKINSVDGFQGGEEDIIILSTVRSNSDGAVGFLSNRQRTNVSLTRARYCLW 629
Query: 607 ILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
ILGNA TL+R S+W LV DA RQCFFNA+ DKD+ + + K E +++ +
Sbjct: 630 ILGNATTLSRSGSIWADLVRDAKDRQCFFNANSDKDISRVLAKHKIETNKVKD 682
>gi|115483164|ref|NP_001065175.1| Os10g0537600 [Oryza sativa Japonica Group]
gi|113639784|dbj|BAF27089.1| Os10g0537600, partial [Oryza sativa Japonica Group]
Length = 985
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/558 (40%), Positives = 327/558 (58%), Gaps = 45/558 (8%)
Query: 118 GDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHT 177
GDI+L GN +RL + + ++YLD RV +L F GW S++ FL NC+S Y
Sbjct: 1 GDIVLFGNKDRLHIGKELSKVYLDDRVHKLLRYFKREDGWKARVDSVMKFLMNCISRYQM 60
Query: 178 YIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFC 237
+D ++Q+ ++ F ++ +F + L CI F
Sbjct: 61 SLD---IQQASSDGCNLT------------------FKKYFTSKFSTLVKELARCIDTFF 99
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIK 297
+P +G+ N M SLLD + LL D+ VS+EL + DE +
Sbjct: 100 DHLPTDSLGR-NLDRMMFAKSLLDKLQQLLCADD-VSDELLFTIFKPSDEPIDS------ 151
Query: 298 YLLHKRRSECHFVLRKLQSSFNE-LNLPSAVEKDLL------------EDLLKSFCLKRA 344
+ H + + L S ++ L + S K L+ E ++ CLKRA
Sbjct: 152 FDSHDQTDDATVDLHDHDISLDDPLEIKSLCIKTLMDLSKMRLPCEDNESSIRDLCLKRA 211
Query: 345 SLFLSTASSSYMLHSVA-MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLP 403
L TASSS+ L + + P++ LVIDEAAQLKE E+ +PL L GI+H +L GDE QL
Sbjct: 212 KLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLS 271
Query: 404 AMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV 463
++V+SK++ +A FGRSL+ERL +GY KHLL +QYRMHP I+ FPN+ FY+N+I D +V
Sbjct: 272 SLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSV 331
Query: 464 RKRSYEKRFLHGPMYGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDS 521
++ Y K +L GP+YG YSFI++ E E S +NMVEV+V I+ L K +
Sbjct: 332 QQEDYMKSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEK 391
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
+++ S+G++SPY+AQV+A+QE+LG ++ N +V V SIDGFQGGEED+I+ISTVRSN
Sbjct: 392 RQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNK 451
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
G +GFLS++ R+NVALTRA++CLWILGN TL S+W LVHD+ R CFFNA DDK
Sbjct: 452 NGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRGCFFNALDDK 511
Query: 642 DLGKAILAVKKELDELDE 659
+L + I+ KE ++ ++
Sbjct: 512 NLAEIIMHATKEGEQRNQ 529
>gi|218195426|gb|EEC77853.1| hypothetical protein OsI_17109 [Oryza sativa Indica Group]
Length = 1402
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/683 (36%), Positives = 358/683 (52%), Gaps = 124/683 (18%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ M + ++++LIWGPPGTGKTKT+S +L +L +TL C PTN
Sbjct: 338 LNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAMLIKGRKTLTCAPTN 396
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
AI E+A+R+V+LV R C D L DI+L GN +R+K+D G E I+LD R +
Sbjct: 397 TAILEVASRIVRLV-----RGCSDGSACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAE 451
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDIN-------------- 191
RL CF P TGW HC S++D L+N V+ Y YI+ + +++ +DI
Sbjct: 452 RLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIE-DVLEKRKDIEKETAEKDKGENVPW 510
Query: 192 ----GDIIKEKECGKEADVSD-VEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
G+ EK+CG+ D + + PF ++++D + ++ L CI P+
Sbjct: 511 RMQFGNGSCEKKCGRPEDKEEPSRLLPFKDYLKDGYNNLSQNLSYCIEILYNNHPRNSGT 570
Query: 247 KDNFHVMATLISLLDSFETLLF-----EDNLVSEELEELLSHSVDEGL-SKSIVGIKY-- 298
+ +F M ++ L+ ++ D E LE ++ D L S+ +V ++
Sbjct: 571 ERSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDPVLWSEQLVSVQTST 630
Query: 299 -LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
+ K R +++L+ L LP+ + K + L+R L T SSS+ L
Sbjct: 631 CIKSKFRLARLLCVQELKYLVKNLELPNCYSIQPI----KLYLLQRTKCILCTVSSSFRL 686
Query: 358 HSVAM------------EP-----LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
++V M +P L L++DEAAQLKE E+ IPLQL GI AV GDE
Sbjct: 687 YNVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPLQLPGITQAVFIGDEY 746
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QLPA+V+SK+++ +CF S F
Sbjct: 747 QLPALVKSKIADN-------------------------------ACFGRSVFER------ 769
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR---NMVEVSVVMKILLNLYKA 517
G E E +CR N +EV+ V++I+ L+K
Sbjct: 770 --------------------------LNGGHETTEKNCRSLKNTIEVATVLRIVQRLFKE 803
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ ++ KLS+G+VSPY+AQV AIQEK+G Y GF+VKV S+DGFQG EED+IIISTV
Sbjct: 804 AVSTQSKLSVGVVSPYNAQVRAIQEKVGKSYNMYDGFSVKVKSVDGFQGAEEDIIIISTV 863
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
RSN GS+GFL+N +R NVALTRA+HCLWI+GN TL+ KS+W+ ++ DA R CFF+A
Sbjct: 864 RSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSIWQKIIKDAQDRGCFFDA 923
Query: 638 DDDKDLGKAILAVKKELDELDEL 660
+DDKDL AI+ E D+ + L
Sbjct: 924 NDDKDLSNAIIKAIIEHDDAENL 946
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 164/225 (72%), Gaps = 4/225 (1%)
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC 498
RMHP IS FP + FY+ KI D S V ++YE++FL ++GPYSFINV GG E E +C
Sbjct: 1025 RMHPEISRFPVATFYDGKISDGSNVTSKNYERKFLASKIFGPYSFINVDGGHET-TEKNC 1083
Query: 499 R---NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
R N +EV+ V++I+ L+K + ++ KLS+G+VSPY+AQV AIQEK+G Y GF+
Sbjct: 1084 RSLKNTIEVATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQVRAIQEKVGKSYNMYDGFS 1143
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
VKV S+DGFQG EED+IIISTVRSN GS+GFL+N +R NVALTRA+HCLWI+GN TL+
Sbjct: 1144 VKVKSVDGFQGAEEDIIIISTVRSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLS 1203
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDEL 660
KS+W+ ++ DA R CFF+A+DDKDL AI+ E D+ + L
Sbjct: 1204 NSKSIWQKIIKDAQDRGCFFDANDDKDLSNAIIKAIIEHDDAENL 1248
>gi|38346802|emb|CAD41370.2| OSJNBa0088A01.9 [Oryza sativa Japonica Group]
Length = 769
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/587 (39%), Positives = 337/587 (57%), Gaps = 84/587 (14%)
Query: 9 SMQSEGVWNETFGPSLSST-LNDSQAQAVLSCLRQMRCDHKATIQ-LIWGPPGTGKTKTV 66
S+ S +W++ LS+ LN+SQ A+L+C+ M ++ ++ LIWGPPGTGKTKT+
Sbjct: 202 SIDSMEIWSK-----LSTMDLNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTI 256
Query: 67 SMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
S+LL ++ +M TL C PTN+A+K++A+R +K++KES +R C LGD+LL GN
Sbjct: 257 SVLLWLMREMDHGTLTCAPTNLAVKQVASRFLKVIKESSDRAC-------LGDVLLCGNK 309
Query: 127 ERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQ 186
+R+ VD ++EIYL RV+ L CF P+TGW H +S+ D +N S Y Y++++
Sbjct: 310 QRMCVDGNLKEIYLHDRVRTLLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQ---- 365
Query: 187 SEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
KE D F + R RF LR C +PK I
Sbjct: 366 ---------------KEGDSLT-----FYSYTRKRFNATYPELRRCFKEVLFHVPKSTIL 405
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-----LH 301
+ N++ + +L+ LL+ F N + +E++ + ++ D+ S K+ L
Sbjct: 406 EVNYNNIISLLELLEDFNKKFMNKN-IEDEVKGIFLYNDDQSDSSVSSLTKFSKTAISLG 464
Query: 302 KRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA 361
K R C +L L SS L LP K + + FC++ AS+ T SSS + +
Sbjct: 465 KIRIRCLELLNMLLSS---LKLPITSSKRTI----REFCMESASIVFCTVSSSSKISNKK 517
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
L LV+DEAAQLKE E IPL+L +KHA+L GDECQLPA V+SKV +A FGRSLF
Sbjct: 518 ---LQLLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVCEDASFGRSLF 574
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
ERLS LG+ KHLL++QYRMHPSIS FPN FY+ K+ D+ V+++ + K++L G M+GPY
Sbjct: 575 ERLSSLGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPGLMFGPY 634
Query: 482 SFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
SF N+ HS +K K+++G++ PY+AQV+AIQ
Sbjct: 635 SFFNIEDA------HS----------------------KTKNKVTVGVICPYTAQVLAIQ 666
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
+KLG + VK+ S DGFQGGEED+I +STVRSN+ G++GFL
Sbjct: 667 QKLGKMKFDPV--IVKINSGDGFQGGEEDIITLSTVRSNSDGAVGFL 711
>gi|357491677|ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 1046
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/516 (44%), Positives = 312/516 (60%), Gaps = 33/516 (6%)
Query: 161 FASMVDFLDN--CVSLYHTYIDNESMKQSED---INGDIIKEKECGKEADVSDV--EIKP 213
+ S+ DF N VS Y Y N + +D G + + ++ D+ ++ I
Sbjct: 533 YKSLDDFATNSIVVSAYSAYKQNIRYDKYDDSLTFEGYVKRARK-----DIIELYQSIMT 587
Query: 214 FLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLV 273
+FV+ R+ + L+ + +PK +I +N ++ LDS ++L E +L
Sbjct: 588 MEQFVKQRYLELREKLKFLLLTLYIHMPKSFISVNN------ILQALDSLKSL--EISLS 639
Query: 274 SEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLE 333
+ ++ +VD+ +SI R +C +L L S ++LP + +E
Sbjct: 640 QAKFKQ----AVDDCEEESIPACFGPSSLERKDCLHILSFLSKS---ISLPDFKVRHQVE 692
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
FCL ASL L T SSS L+S P+ FLVIDEAA LKE ESTIPLQL G+ H
Sbjct: 693 ----KFCLSNASLILCTVSSSIKLYSEEKSPVKFLVIDEAAMLKECESTIPLQLPGLCHC 748
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
+L GDE QLPA+V+SK+++E FGRS+FERL GY +H+L++QYRMHPSIS FP FY
Sbjct: 749 ILIGDERQLPALVKSKIADECEFGRSMFERLVTSGYKRHMLNVQYRMHPSISLFPCKEFY 808
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILL 512
+ KI D+ V K Y K FL G MY YSFIN+ G+E+F E+S +NMVEV+V+ KIL
Sbjct: 809 DGKISDAVIVGKEKYNKHFLEGKMYASYSFINIAKGKEQFGRENSLKNMVEVAVISKILE 868
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY-VNSAGFAVKVMSIDGFQGGEEDL 571
+L ++ +K+K+SIGI+SPY+AQV IQEK+ V+ F+V V S+DGFQGGEED+
Sbjct: 869 SLKHEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDI 928
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
IIISTVRSN G +GFLSN +RVNVA+TRAR+CLWILGNA TL SVW +V DA R
Sbjct: 929 IIISTVRSNESGKVGFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVVLDAKRR 988
Query: 632 QCFFNADDDKDLGKAILAVKKELDELDELLNPESRL 667
CF NA ++K L +AI V E+ LD +P +L
Sbjct: 989 DCFHNAAENKKLARAINDVLFEIKLLDGSESPFKKL 1024
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 216/462 (46%), Gaps = 79/462 (17%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S LN+SQ AV SC+R + C H A +LIWGPPGTGKTKTV+ LL LL++K RTL C
Sbjct: 281 SQNLNESQQDAVTSCVRMVDCSH-ANTKLIWGPPGTGKTKTVACLLFSLLKLKSRTLTCA 339
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDS--GVEEIYLDY 142
PTN AI ++A R+ LV +S++ D + LGDI+L GN +R+KVDS G+E+I+LDY
Sbjct: 340 PTNTAILQVAIRLHSLVTDSLDHDT-----YGLGDIVLFGNGKRMKVDSYPGLEDIFLDY 394
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDN---------------------CVSLYHTYIDN 181
RVK L C+A W+H ++++FL + S YH Y
Sbjct: 395 RVKNLMQCYAE---WNHSLVAIIEFLSDPSKQYFLEMSKKDFVMDKNRILASAYHAY--- 448
Query: 182 ESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIP 241
K ++ +G I++ + ++A ++ E D+ +C+ R RI
Sbjct: 449 ---KINKGNHGLIMRFENYVQKARTEITKLYQLDE--NDKKECMLTIERFVK----QRID 499
Query: 242 KCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLH 301
K + + NF M SL+ LFED + ++ S+D+ + SIV Y +
Sbjct: 500 KLRMNRVNF-FMTVFTSLMQ-----LFEDPR-EQIFSKMGYKSLDDFATNSIVVSAYSAY 552
Query: 302 KRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFC-----LKRASLFLSTASSSYM 356
K+ + K S KD++E L +S +K+ L L +
Sbjct: 553 KQ----NIRYDKYDDSLTFEGYVKRARKDIIE-LYQSIMTMEQFVKQRYLELREKLKFLL 607
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLS--GIKHAVLFGDECQLPAMVESKVSNEA 414
L P +F+ ++ Q +S ++ + LS K AV D+C+ ++ A
Sbjct: 608 LTLYIHMPKSFISVNNILQALDSLKSLEISLSQAKFKQAV---DDCEEESI-------PA 657
Query: 415 CFGRSLFER------LSYLGYSKHLLSIQYRMHPSISCFPNS 450
CFG S ER LS+L S L + R C N+
Sbjct: 658 CFGPSSLERKDCLHILSFLSKSISLPDFKVRHQVEKFCLSNA 699
>gi|413919136|gb|AFW59068.1| hypothetical protein ZEAMMB73_252554 [Zea mays]
Length = 1056
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/514 (43%), Positives = 300/514 (58%), Gaps = 43/514 (8%)
Query: 185 KQSEDINGDIIKEKECGKEADVSDVEIKP-FLEFVRDRFKCIAAPLRSCIFNFCTRIPKC 243
K SE + D E EC K + + I P F +++RD +K ++ L CI P+
Sbjct: 543 KYSEYKDNDCGNE-ECYKSGEAEEAVIVPSFKDYLRDEYKKLSGNLYDCIKILYNDHPRN 601
Query: 244 YIGKDNFHVMATLISLLDSFETLLFED----NLVSEEL------EELLSHSVDEGL---- 289
+F M ++ L+ L+ D ++ SEEL +E + E L
Sbjct: 602 PETGRSFQCMMEVLELIKILYALINSDVDDGDICSEELLASKVEDEWDPETWPEKLATVK 661
Query: 290 SKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLS 349
+ S +K+ L + +++L+ L LP+ +E L L RA L
Sbjct: 662 TNSCNKLKFSLAR-----SMFVQELRYLCTNLVLPNCYCARSVEQYL----LARAKCILC 712
Query: 350 TASSSYMLHSVAME----------------PLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
T SSS+ L++V M L L++DEAAQ+KE E+ IPLQL GIK A
Sbjct: 713 TVSSSFRLYNVPMRYSSSGLCGLPTKPENISLELLIVDEAAQVKECETLIPLQLPGIKQA 772
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
+L GDE QLPA+V+SK+S+ A FGRS+FERLS LGYSKHLL++QYRMHP IS FP S FY
Sbjct: 773 ILIGDEYQLPALVKSKISDSAKFGRSVFERLSSLGYSKHLLNVQYRMHPEISKFPVSKFY 832
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKIL 511
KI D V ++Y KRFL G +GPYSFINV G E E S +N +EV VV +++
Sbjct: 833 GGKISDGPNVTHKNYGKRFLAGKWFGPYSFINVDCGHETTEKNARSLKNTIEVVVVARMV 892
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
LY + ++ KLS+G+VSPY+AQV AIQE+L Y + GF+VKV S+DGFQG EED+
Sbjct: 893 QRLYNETVSTRTKLSVGVVSPYNAQVRAIQEELKKTYRSYDGFSVKVKSVDGFQGAEEDI 952
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
IIISTVRSN GS+GFLSN +R NVALTRA+HCLWI+GN TL S+W+ +++D R
Sbjct: 953 IIISTVRSNGAGSVGFLSNLQRANVALTRAKHCLWIVGNGTTLLSSNSIWQKIINDVQNR 1012
Query: 632 QCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
CFF+ DD+DL ++ ELD + L+ ES
Sbjct: 1013 GCFFDVRDDRDLSNKVMKATIELDAAENLVKMES 1046
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 14/184 (7%)
Query: 7 LCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV 66
C+ +G+ E F LNDSQ AV+ C M +H ++I+L+WGPPGTGKTKT+
Sbjct: 292 FCNGSVDGLGLEKF------NLNDSQLNAVVDCALAME-NHSSSIKLLWGPPGTGKTKTI 344
Query: 67 SMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
S +L +L +TL C PTN A+ E+AAR+V LV + D+ L DI+L G+
Sbjct: 345 STILWAMLIKGRKTLACAPTNTAVLEVAARIVNLVGKP-----SDSSVCFLNDIVLFGSK 399
Query: 127 ERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESM 184
+R+K+D+G + I+L+ R KRL CF P TGW HC S++D L+N + Y YI+ + +
Sbjct: 400 KRMKIDNGNPLSAIFLESRAKRLLPCFMPSTGWIHCLCSLIDLLENSSTKYQLYIEAKGI 459
Query: 185 KQSE 188
Q +
Sbjct: 460 IQQK 463
>gi|356518854|ref|XP_003528092.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
[Glycine max]
Length = 514
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/342 (54%), Positives = 242/342 (70%), Gaps = 22/342 (6%)
Query: 352 SSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVS 411
S SY H+++++PLN LVIDEAAQLK+ ES P+ L GI A+L GDECQLP+MV
Sbjct: 172 SGSYKRHTLSIKPLNILVIDEAAQLKDXESMTPMLLPGISQAILVGDECQLPSMV----C 227
Query: 412 NEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKR 471
EA FGRSLFERLS LG+ K+LL++QYRMHP I FPNS+FY N+I+D+ V + Y K
Sbjct: 228 YEAGFGRSLFERLSSLGHPKYLLNMQYRMHPQIRSFPNSFFYFNQIQDAQNVERNDYGKH 287
Query: 472 FLHGPMYGPYSFINVFGGREEF--IEHSCRNMVEVSVVMKILLNLYKA------------ 517
+L GPM+G SFIN+ G+E+F S +NM EV++++ IL NL+K+
Sbjct: 288 YLPGPMFGXLSFINIIRGKEKFEAAGRSYKNMAEVAIIVTILKNLHKSMTVPFGTTDIFS 347
Query: 518 --WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY--VNSAGFAVKVMSIDGFQGGEEDLII 573
W+ SKE+LSIGI+SPY+ QV AIQE LG Y N GF V V SIDGFQGGE+D+II
Sbjct: 348 LPWLTSKERLSIGIMSPYAGQVTAIQENLGKMYDRHNHDGFNVNVKSIDGFQGGEQDVII 407
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
+STVR+NN S+ F+++ +R NVALTRARHCLWILGN R LT ++VW+A+V DA +R+C
Sbjct: 408 LSTVRTNNRASLEFIASLQRTNVALTRARHCLWILGNERALTSNENVWKAIVLDAKSRKC 467
Query: 634 FFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKV 675
FFN D D ++ KAIL KE D+ D+LL+ S F++ WK+
Sbjct: 468 FFNVDRDNEMTKAILDAMKESDQFDDLLDTNSVHFKNAFWKI 509
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ +A+ +CL +C+H + ++L WGPPGTGKTK+++ L LL+MK+R LVC PTN
Sbjct: 11 LNESQNKAISACLSGHKCNHNSVVKLXWGPPGTGKTKSLATLXFALLKMKYRVLVCAPTN 70
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
+AIKE+A+RVV LVKES ++ D LF +GD+LL GNNERLK+ +++IYLD+ ++L
Sbjct: 71 IAIKEVASRVVTLVKESHAKESGD-LFCSMGDLLLSGNNERLKIGEDIKDIYLDHLAQQL 129
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
A+C AP TG S C SM+ FL+NC S YH D
Sbjct: 130 AECLAPSTGLSSCLKSMIGFLENCTSYYHIVKD 162
>gi|297603234|ref|NP_001053657.2| Os04g0582000 [Oryza sativa Japonica Group]
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa Japonica Group]
gi|255675717|dbj|BAF15571.2| Os04g0582000 [Oryza sativa Japonica Group]
Length = 813
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/391 (50%), Positives = 263/391 (67%), Gaps = 16/391 (4%)
Query: 297 KYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLED----LLKSFCLKRASLFLSTAS 352
K + K R C +LR L+ + L LP L +D ++ + L+R L T S
Sbjct: 418 KSKIRKARLLCVRILRYLKIN---LKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVS 474
Query: 353 SSYMLHSVAME-------PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAM 405
SSY+LH+V+M+ PL LV+DEAAQLKE E+ IP+QL GIK AV GDECQLPA+
Sbjct: 475 SSYVLHNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPAL 534
Query: 406 VESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRK 465
V+SK+S+ A FGRS+FERLS LGY+KHLL+IQYRM P IS FP + FY+ KI D V
Sbjct: 535 VKSKISDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVS 594
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKE 523
++Y++ L G M+GPYSFINV GG E +H S +N +EV+ V+ I+ L++ +
Sbjct: 595 KNYKRNILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGS 654
Query: 524 KLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG 583
KL++G+VSPY+AQV AIQEK+G Y F+VKV S+DGFQG EED+IIISTVRSN G
Sbjct: 655 KLTVGVVSPYNAQVRAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAG 714
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDL 643
S+GFL+N +R N+ALTRA+HCLWI+GN TL+ +SVW+ +V+DA R CFF A + K L
Sbjct: 715 SVGFLTNLQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASEYKHL 774
Query: 644 GKAILAVKKELDELDELLNPESRLFRSQRWK 674
AI+ ELD+ + L+ +S + R++
Sbjct: 775 SNAIVNAVIELDDAENLVKMDSLQITNPRFQ 805
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 22/107 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ AV C+ + + I+LIWGPP TG RTL C PTN
Sbjct: 313 LNNSQLNAVADCV-LVSEKISSPIKLIWGPPRTG----------------HRTLTCAPTN 355
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG 134
A+ E+A+R+VKLV ES + L DI+L GN +R+K+ G
Sbjct: 356 TAVLEVASRIVKLVHESPASSGQ-----YLSDIVLFGNKKRMKIGHG 397
>gi|222629425|gb|EEE61557.1| hypothetical protein OsJ_15904 [Oryza sativa Japonica Group]
Length = 822
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 196/391 (50%), Positives = 263/391 (67%), Gaps = 16/391 (4%)
Query: 297 KYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLED----LLKSFCLKRASLFLSTAS 352
K + K R C +LR L+ + L LP L +D ++ + L+R L T S
Sbjct: 427 KSKIRKARLLCVRILRYLKIN---LKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVS 483
Query: 353 SSYMLHSVAME-------PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAM 405
SSY+LH+V+M+ PL LV+DEAAQLKE E+ IP+QL GIK AV GDECQLPA+
Sbjct: 484 SSYVLHNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPAL 543
Query: 406 VESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRK 465
V+SK+S+ A FGRS+FERLS LGY+KHLL+IQYRM P IS FP + FY+ KI D V
Sbjct: 544 VKSKISDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVS 603
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKE 523
++Y++ L G M+GPYSFINV GG E +H S +N +EV+ V+ I+ L++ +
Sbjct: 604 KNYKRNILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGS 663
Query: 524 KLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG 583
KL++G+VSPY+AQV AIQEK+G Y F+VKV S+DGFQG EED+IIISTVRSN G
Sbjct: 664 KLTVGVVSPYNAQVRAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAG 723
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDL 643
S+GFL+N +R N+ALTRA+HCLWI+GN TL+ +SVW+ +V+DA R CFF A + K L
Sbjct: 724 SVGFLTNLQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASEYKHL 783
Query: 644 GKAILAVKKELDELDELLNPESRLFRSQRWK 674
AI+ ELD+ + L+ +S + R++
Sbjct: 784 SNAIVNAVIELDDAENLVKMDSLQITNPRFQ 814
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 24/126 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ AV C+ + + I+LIWGPP TG RTL C PTN
Sbjct: 299 LNNSQLNAVADCV-LVSEKISSPIKLIWGPPRTG----------------HRTLTCAPTN 341
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV--DSGVEEIYLDYRVK 145
A+ E+A+R+VKLV ES + L DI+L GN +R+K+ D + ++L R +
Sbjct: 342 TAVLEVASRIVKLVHESPASSGQ-----YLSDIVLFGNKKRMKIGEDHDLSVVFLSSRTE 396
Query: 146 RLADCF 151
RL+ CF
Sbjct: 397 RLSQCF 402
>gi|222629427|gb|EEE61559.1| hypothetical protein OsJ_15907 [Oryza sativa Japonica Group]
Length = 767
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 224/567 (39%), Positives = 326/567 (57%), Gaps = 60/567 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ M + ++++LIWGPPGTGKTKT+S +L +L +TL C PTN
Sbjct: 137 LNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAMLIKGRKTLTCAPTN 195
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
+I E+A+R+V+LV R C D L DI+L GN +R+K+D G E I+LD R +
Sbjct: 196 TSILEVASRIVRLV-----RGCSDGSACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAE 250
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDIN-------------- 191
RL CF P TGW HC S++D L+N V+ Y YI+ + +++ +DI
Sbjct: 251 RLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIE-DVLEKRKDIEKETAEKDKGENVPW 309
Query: 192 ----GDIIKEKECGKEADVSDV-EIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
G+ EK+CG+ D + + PF +++D + ++ L CI P+
Sbjct: 310 RMQFGNGSCEKKCGRPEDKEEASRLLPFKYYLKDGYNNLSQNLSYCIEILYNNHPRNSGT 369
Query: 247 KDNFHVMATLISLLDSFETLLF-----EDNLVSEELEELLSHSVDEGL-SKSIVGIKY-- 298
+ +F M ++ L+ ++ D E LE ++ D L S+ +V ++
Sbjct: 370 ERSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDPVLWSEQLVSVQTST 429
Query: 299 -LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
+ K R +++L+ L LP+ + K + L+R L T SSS+ L
Sbjct: 430 CIKSKFRLARLLCVQELKYLVKNLELPNYYSIQPI----KLYLLQRTKCILCTVSSSFRL 485
Query: 358 HSVAM------------EP-----LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
++V M +P L L++DEAAQLKE E+ IPLQL GI AVL GDE
Sbjct: 486 YNVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPLQLPGITQAVLIGDEY 545
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QLPA+V+SK+++ A FGRS+FERLS LGYSKHLL++QYRMHP IS FP + FY+ KI D
Sbjct: 546 QLPALVKSKIADNAFFGRSVFERLSLLGYSKHLLNVQYRMHPEISRFPVATFYDGKISDG 605
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKAW 518
S V ++YE++FL ++GPYSFINV GG E E S +N +EV+ V++I+ L+K
Sbjct: 606 SNVTSKNYERKFLASKIFGPYSFINVDGGHETAEKNGRSLKNTIEVATVLRIVQRLFKEA 665
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLG 545
+ ++ KLS+G+VSPY+AQV AIQEK+G
Sbjct: 666 VSTQSKLSVGVVSPYNAQVRAIQEKVG 692
>gi|449531179|ref|XP_004172565.1| PREDICTED: helicase SEN1-like, partial [Cucumis sativus]
Length = 606
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 220/526 (41%), Positives = 308/526 (58%), Gaps = 78/526 (14%)
Query: 2 DETCELCSMQSEGVWNETFGPSL---SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPP 58
++TC+ C+ Q++G + +L S +LN+SQ A+ SC+R+++C HK +I+LIWGPP
Sbjct: 148 NKTCKQCNNQTDGEDSTEDMATLRLASLSLNESQRVAIESCIRKVKCQHKPSIELIWGPP 207
Query: 59 GTGKTKTVSMLL--VILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP 116
GTGKTKT S+LL ++ + + RTL C PTNVAI LA++V+KL+K + R+A+F P
Sbjct: 208 GTGKTKTTSILLWKILAINHQIRTLACAPTNVAITNLASQVLKLLKH--DSLSRNAIFCP 265
Query: 117 LGDILLLGNNERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSL 174
LG++LL GN +RLK D +E+IYLD RV++L C G +SM+
Sbjct: 266 LGELLLFGNKDRLKFDYSHQLEDIYLDRRVEKLFKCLGQY-GLKFQISSMIG-------- 316
Query: 175 YHTYIDNESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIF 234
I +E + K ++ FK + L C+
Sbjct: 317 -------------------IFQENKLSK---------------LKRMFKSNVSSLLECVH 342
Query: 235 NFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIV 294
F T IP+ I + N+ + L+ + TLL ++N ++ D+ + ++++
Sbjct: 343 IFTTHIPQQVIMEHNWKKLEILVGFICDIGTLLSKNNY---------NYDDDDTMGEALI 393
Query: 295 GIKYLLHKRRSECHF--VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS 352
+K CHF VLR L S +E+ +PS + K+ +E FC ++ASL ST S
Sbjct: 394 DLK---------CHFLLVLRTLLVSLDEIEVPSKLSKNSIE----KFCFQKASLIFSTTS 440
Query: 353 SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+S+ L+SV LN +V+DEAAQLKE ES IPLQL I HA+L GDE QLPA V+SKV
Sbjct: 441 NSFKLNSVKKNSLNLVVVDEAAQLKECESLIPLQLPHISHAILVGDEFQLPATVKSKVCE 500
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
A FGRSL+ERLS +GYSKHLL QYRMHP +S FPNS FY NKI D+S V + YEK +
Sbjct: 501 RAKFGRSLYERLSLIGYSKHLLDTQYRMHPLVSYFPNSKFYGNKIMDASIVMNKEYEKEY 560
Query: 473 LHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSVVMKILLNLYK 516
L P++GPYSFINV GG EE S +NMVEV+VV +I+ LYK
Sbjct: 561 LPSPLFGPYSFINVCGGEEESNGDGQSKKNMVEVTVVTQIIQMLYK 606
>gi|297805244|ref|XP_002870506.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
gi|297316342|gb|EFH46765.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 176/315 (55%), Positives = 234/315 (74%), Gaps = 3/315 (0%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
++ FCL+ A + L TASS + + ++ LV+DEAAQLKE ES LQL G++HA+L
Sbjct: 526 IRKFCLQNADIILCTASSVANMVPERIGSVDLLVVDEAAQLKECESVTALQLPGLRHALL 585
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPAMV SK +A FGRSLFERL +G++KHLL++QYRMHPSISCFPN FY+
Sbjct: 586 IGDEYQLPAMVHSKECEKAKFGRSLFERLVLIGHNKHLLNVQYRMHPSISCFPNKEFYDG 645
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNL 514
+I D+S V++R YEKRFL G M+G +SFINV G+EEF + HS +NMVEV+V+ +I+ NL
Sbjct: 646 RITDASIVQERIYEKRFLQGKMFGSFSFINVGRGKEEFCDGHSPKNMVEVAVISEIISNL 705
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAVKVMSIDGFQGGEEDLI 572
+K +K+S+G++SPY QV AIQE++G KY + +G F + V S+DGFQGGEED+I
Sbjct: 706 FKVSSLRNQKMSVGVISPYKGQVRAIQERIGDKYGSLSGQLFTLNVQSVDGFQGGEEDII 765
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
IISTVRSN G++GFLSN +R NVALTRARHCLW++GN TL S+W L+ ++ R
Sbjct: 766 IISTVRSNVNGNVGFLSNHQRANVALTRARHCLWVIGNETTLALSGSIWAELISESRTRG 825
Query: 633 CFFNADDDKDLGKAI 647
CF++A DDK+L A+
Sbjct: 826 CFYDAVDDKNLRDAM 840
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 24/178 (13%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+ CL+ C+HK +++LIWGPPG KT+ ++ LL L+Q+K +T+VC
Sbjct: 234 SAKLNSSQEAAIFGCLKTRNCNHKKSVKLIWGPPG-AKTQDITTLLSALIQLKCKTVVCA 292
Query: 85 PTNVAIKELAARVVKLVKESV----------ERDCR-DALFFP----------LGDILLL 123
PTN AI +A+R++ L KE++ E R +LF+ +G+I+L
Sbjct: 293 PTNTAIVAVASRLLALSKETIVCAPTNSAIAEVVSRFSSLFYGTSILERTTYGMGNIVLS 352
Query: 124 GNNERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
GN ER+ + + + ++ + RV +L F GW S++DFL+N + Y ++
Sbjct: 353 GNRERMGIKNNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESVIDFLENTEAKYEQHV 410
>gi|297723397|ref|NP_001174062.1| Os04g0582800 [Oryza sativa Japonica Group]
gi|255675720|dbj|BAH92790.1| Os04g0582800 [Oryza sativa Japonica Group]
Length = 794
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 317/567 (55%), Gaps = 92/567 (16%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQ-LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPT 86
LN+SQ A+L+C+ M ++ ++ LIWGPPGTGKTKT+S+LL ++ +M TL C PT
Sbjct: 256 LNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPT 315
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
N+A+K++A+R +K++KES +R C LGD+LL GN +R+ VD ++EIYL RV+
Sbjct: 316 NLAVKQVASRFLKVIKESSDRAC-------LGDVLLCGNKQRMCVDGNLKEIYLHDRVRT 368
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADV 206
L CF P+TGW H +S+ D +N S Y Y++++ KE D
Sbjct: 369 LLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQ-------------------KEGDS 409
Query: 207 SDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETL 266
F + R RF LR C +PK I + N++ + +L+ LL+ F
Sbjct: 410 LT-----FYSYTRKRFNATYPELRRCFKEVLFHVPKSTILEVNYNNIISLLELLEDFNKK 464
Query: 267 LFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-----LHKRRSECHFVLRKLQSSFNEL 321
N + +E++ + ++ D+ S K+ L K R C +L L SS L
Sbjct: 465 FMNKN-IEDEVKGIFLYNDDQSDSSVSSLTKFSKTAISLGKIRIRCLELLNMLLSS---L 520
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
LP K + + FC++ AS+ T SSS + + L LV+DEAAQLKE E
Sbjct: 521 KLPITSSKRTI----REFCMESASIVFCTVSSSSKISNKK---LQLLVVDEAAQLKECEG 573
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
IPL+L +KHA+L GDECQLPA V+SKV +A FGRSLFERLS LG+ KHLL++QYRMH
Sbjct: 574 LIPLRLPTLKHAILIGDECQLPATVKSKVCEDASFGRSLFERLSSLGHEKHLLNMQYRMH 633
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNM 501
PSIS FPN FY+ K+ D+ V+++ + K++L HS
Sbjct: 634 PSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPA--------------------HS---- 669
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
+K K+++G++ PY+AQV+AIQ+KLG + VK+ S
Sbjct: 670 ------------------KTKNKVTVGVICPYTAQVLAIQQKLGKMKFDPV--IVKINSG 709
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFL 588
DGFQGGEED+I +STVRSN+ G++GFL
Sbjct: 710 DGFQGGEEDIITLSTVRSNSDGAVGFL 736
>gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006765|gb|AED94148.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 871
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 228/317 (71%), Gaps = 6/317 (1%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
++ FCL+ A + TASS ++ + ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 531 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 590
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPAMV ++ ++A FGRSLFERL +G+SKHLL++QYRMHPSIS FPN FY
Sbjct: 591 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 650
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNL 514
+I D++ V++ YEKRFL G M+G +SFINV G+EEF + HS +NMVEV+V+ KI+ NL
Sbjct: 651 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 710
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG----FAVKVMSIDGFQGGEED 570
+K K+K+S+G++SPY QV AIQE++G KY NS F + V S+DGFQGGE D
Sbjct: 711 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKY-NSLSVDQLFTLNVQSVDGFQGGEVD 769
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+IIISTVR N G++GFLSN +R NVALTRARHCLW++GN TL S+W L+ ++
Sbjct: 770 VIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRT 829
Query: 631 RQCFFNADDDKDLGKAI 647
R CF++A DDK+L A+
Sbjct: 830 RGCFYDAVDDKNLRDAM 846
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 25/181 (13%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L L+ C HK +++LIWGPPGTGKTKTV+ LL L+Q+K +T+VC
Sbjct: 241 SAKLNSSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCA 300
Query: 85 PTNVAIKELAARVVKLVKES-------------VERDCRDALF----------FPLGDIL 121
PTN I +A+R++ L KE+ V R LF + +G+I+
Sbjct: 301 PTNTTIVAVASRLLSLSKETIVCAPTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNIV 360
Query: 122 LLGNNERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L GN ER+ + S + ++ + RV +L F GW S++DFL+N + Y ++
Sbjct: 361 LSGNRERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHV 420
Query: 180 D 180
+
Sbjct: 421 N 421
>gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis thaliana]
Length = 834
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 228/317 (71%), Gaps = 6/317 (1%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
++ FCL+ A + TASS ++ + ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 494 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 553
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPAMV ++ ++A FGRSLFERL +G+SKHLL++QYRMHPSIS FPN FY
Sbjct: 554 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 613
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNL 514
+I D++ V++ YEKRFL G M+G +SFINV G+EEF + HS +NMVEV+V+ KI+ NL
Sbjct: 614 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 673
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG----FAVKVMSIDGFQGGEED 570
+K K+K+S+G++SPY QV AIQE++G KY NS F + V S+DGFQGGE D
Sbjct: 674 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKY-NSLSVDQLFTLNVQSVDGFQGGEVD 732
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+IIISTVR N G++GFLSN +R NVALTRARHCLW++GN TL S+W L+ ++
Sbjct: 733 VIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRT 792
Query: 631 RQCFFNADDDKDLGKAI 647
R CF++A DDK+L A+
Sbjct: 793 RGCFYDAVDDKNLRDAM 809
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 25/181 (13%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
S+ LN SQ A+L L+ C HK +++LIWGPPGTGKTKTV+ LL L+Q+K +T+VC
Sbjct: 241 SAKLNSSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCA 300
Query: 85 PTNVAIKELAARVVKLVKES-------------VERDCRDALF----------FPLGDIL 121
PTN I +A+R++ L KE+ V R LF + +G+I+
Sbjct: 301 PTNTTIVAVASRLLSLSKETIVCAPTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNIV 360
Query: 122 LLGNNERLKVDSG--VEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYI 179
L GN ER+ + S + ++ + RV +L F GW S++DFL+N + Y ++
Sbjct: 361 LSGNRERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHV 420
Query: 180 D 180
+
Sbjct: 421 N 421
>gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|50251934|dbj|BAD27870.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
Length = 372
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 219/322 (68%), Gaps = 10/322 (3%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L R++C L+KL+ + LP+ +K +ED F ++ A L TASSS LH
Sbjct: 54 LKDARAQC---LQKLKHLSDHFELPNVFDKRSIED----FLVRNAKSILCTASSSSRLHY 106
Query: 360 VA-MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ P + LV+DEAAQLKE ES IPLQL G++HAVL G E QLPA+V+S+V +A FGR
Sbjct: 107 LPEASPFDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGR 166
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFERLS LG+ KHLL +QYRMHP IS FP S FYENKI D V R YE++ L GPMY
Sbjct: 167 SLFERLSSLGHPKHLLDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMY 226
Query: 479 GPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
G YSFINV G+E +H S N +EV+ V +I+ L+K +D+ KL +G+VSPY Q
Sbjct: 227 GSYSFINVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQ 286
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V AIQE+LG Y GF VKV S+DGFQG EED+II S VRSN GS+GFLSN R NV
Sbjct: 287 VRAIQERLGKAYETHGGFTVKVRSVDGFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNV 346
Query: 597 ALTRARHCLWILGNARTLTRKK 618
ALTRA+HCLWILGNA TL K
Sbjct: 347 ALTRAKHCLWILGNANTLASSK 368
>gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006756|gb|AED94139.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 638
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/318 (54%), Positives = 223/318 (70%), Gaps = 12/318 (3%)
Query: 346 LFLSTASSSYMLHSV---------AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 396
LFLST L S+ + LV+DEAAQLKE ES LQL G++HA+L
Sbjct: 320 LFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQLKECESVAALQLPGLRHAILI 379
Query: 397 GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENK 456
GDE QLPAMV + +A FGRSLFERL LG+ KHLL +QYRMHPSIS FP FY +
Sbjct: 380 GDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEFYGGR 439
Query: 457 IRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLY 515
I+D++ V++ Y+KRFL G M+G +SFINV G+EEF + S +NMVEV+VV +I+ NL+
Sbjct: 440 IKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEIISNLF 499
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG--FAVKVMSIDGFQGGEEDLII 573
K + K K+S+G+++PY QV AIQE++ KY + +G F V V S+DGFQGGEED+II
Sbjct: 500 KVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIII 559
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
ISTVRSN+ G +GFLSN +R NVALTRARHCLW++GN TL R S+W L+ D+ R+C
Sbjct: 560 ISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSKRRKC 619
Query: 634 FFNADDDKDLGKAILAVK 651
F++A DDK L A+ AV+
Sbjct: 620 FYDAKDDKRLRDAMNAVQ 637
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCT 84
SS LN SQ A+LSCL +HK +++LIWGP KTKTV+ LL++LL+++ +T+VC
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCA 257
Query: 85 PTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDY 142
PTN AI E+ +R++ L + E + LG+I L GN +R+++ + ++LD+
Sbjct: 258 PTNTAIVEVTSRLLALSNKYSEHAT-----YGLGNIFLAGNQKRMRIKDTDYLRNVFLDH 312
Query: 143 RVKRLADCFAPLTGWSHCFASMVDFLDN 170
R+ +L F GW S++D L+N
Sbjct: 313 RISKLRKLFLSTCGWKQSLESIIDLLEN 340
>gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis thaliana]
Length = 536
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 215/290 (74%), Gaps = 3/290 (1%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ LV+DEAAQLKE ES LQL G++HA+L GDE QLPAMV + +A FGRSLFERL
Sbjct: 246 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 305
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG+ KHLL +QYRMHPSIS FP FY +I+D++ V++ Y+KRFL G M+G +SFI
Sbjct: 306 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 365
Query: 485 NVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
NV G+EEF + S +NMVEV+VV +I+ NL+K + K K+S+G+++PY QV AIQE+
Sbjct: 366 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQER 425
Query: 544 LGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ KY + +G F V V S+DGFQGGEED+IIISTVRSN+ G +GFLSN +R NVALTRA
Sbjct: 426 IRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRA 485
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK 651
RHCLW++GN TL R S+W L+ D+ R+CF++A DDK L A+ AV+
Sbjct: 486 RHCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRLRDAMNAVQ 535
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTL 81
P LN A+LSCL +HK +++LIWGP KTKTV+ LL++LL+++ +T+
Sbjct: 124 PRGVDDLNPLLLAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTV 180
Query: 82 VCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVD------SGV 135
VC PTN AI E+ +R++ L + E + LG+I L GN +R+++ SG
Sbjct: 181 VCAPTNTAIVEVTSRLLALSNKYSEHAT-----YGLGNIFLAGNQKRMRIKDTDYLPSGA 235
Query: 136 EEI 138
EI
Sbjct: 236 AEI 238
>gi|357491699|ref|XP_003616137.1| Ubiquitin [Medicago truncatula]
gi|355517472|gb|AES99095.1| Ubiquitin [Medicago truncatula]
Length = 1337
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/494 (42%), Positives = 282/494 (57%), Gaps = 46/494 (9%)
Query: 161 FASMVDFLDN--CVSLYHTYIDNESMKQSED---INGDIIKEKECGKEADVSDVEIKPFL 215
+ S+ DF N VS Y Y N + +D G + K KE I
Sbjct: 849 YKSLDDFATNSIVVSAYSAYKQNIGYDKYDDSLTFEGYV---KRARKEIMELYQSIMTME 905
Query: 216 EFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSE 275
+FV+ RF ++ L+ I CT +PK I +N M + LL S E L +
Sbjct: 906 QFVKQRFGELSEKLKFLIHTLCTHMPKSLISVNN---MLQALDLLKSMEISLSQAKF--- 959
Query: 276 ELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDL 335
+VD+ +SI R++C LR L N ++LP + +E
Sbjct: 960 ------KQTVDDFEEESIPACFGPSSLERNDC---LRILSFLSNSISLPEFKVRHQVE-- 1008
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
FCL ASL L T SSS L+S P+ FLVIDEAAQLKE ES IPLQL G++H +L
Sbjct: 1009 --KFCLSDASLILCTVSSSIKLYSEETSPVKFLVIDEAAQLKECESMIPLQLPGLQHCIL 1066
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GDE QLPA+V+SK+++ FGRS+FERL LGY KH+L++QYRMHPSIS FP FY+
Sbjct: 1067 IGDEKQLPALVKSKIADNCRFGRSMFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDE 1126
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNL 514
K D+ V+ +SY K FL G MY YSFIN+ G+E+F HS +NMVEV+V+ +I+ NL
Sbjct: 1127 KNLDALAVKDQSYNKSFLEGEMYSSYSFINISKGKEKFGHGHSLKNMVEVAVISEIIKNL 1186
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS-AGFAVKVMSIDGFQGGEEDLII 573
K ++ +K+K+SIGI+SPY+AQV IQEK+ +S + F+V V S+D
Sbjct: 1187 RKEFMRTKKKVSIGIISPYNAQVYEIQEKVKQDTWDSNSDFSVNVRSVD----------- 1235
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
+ G++GFLSN +R NVA+TRAR+CLWILGNA TL S+W L+ DA R C
Sbjct: 1236 ------DGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIIDAKRRDC 1289
Query: 634 FFNADDDKDLGKAI 647
+ NAD+DK L + I
Sbjct: 1290 YHNADEDKKLARVI 1303
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 12/171 (7%)
Query: 3 ETCELCSMQSEGVWNETFGPSL-SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTG 61
E C++C +S + + S LN+SQ AV SC + C H A +LIWGPPGTG
Sbjct: 595 ENCKICMSRSNSKASFITKDIIRSQNLNESQQDAVTSCASMVDCSH-ANTKLIWGPPGTG 653
Query: 62 KTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDIL 121
KTKTV+ LL LL++K RTL C PTN AI ++A R+ LV +S + D + LGDI+
Sbjct: 654 KTKTVACLLFSLLKLKSRTLTCAPTNTAILQVAIRLHSLVTDSPDHDT-----YGLGDIV 708
Query: 122 LLGNNERLKVDS--GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDN 170
L GN +R+KVDS G+E+I+LDYRVK L C+ T W+H F +M+ FL +
Sbjct: 709 LFGNGKRMKVDSCPGLEDIFLDYRVKNLMQCY---TEWNHSFEAMIKFLSD 756
>gi|358345417|ref|XP_003636775.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355502710|gb|AES83913.1| Lupus brain antigen-like protein [Medicago truncatula]
Length = 919
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 262/440 (59%), Gaps = 70/440 (15%)
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
+CLWILGN R L +VW ALV D+ R FF+ D + ++ KA+L KELD+ +LL+
Sbjct: 130 YCLWILGNERALVNNNNVWRALVIDSKNRGLFFSTDQNPEMAKAVLDSMKELDQSLDLLD 189
Query: 663 PESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCGSS 722
S +FR+ WKV F++ F KSF+K+ +K SVI++L +L+NGWRP+ R V+ VC +S
Sbjct: 190 TNSAIFRNTMWKVYFTDQFRKSFQKVRQPQSKISVINVLERLANGWRPRGRTVELVCENS 249
Query: 723 LHIIKQFKVEGFYIICTIDIVKESQ-YFQVLKVWDILPLEDVPKVVARLDNIYVKYTAEF 781
I+KQFKVE YIIC+I+IVK+ Q + QVLK+WDI+ LED+PK+ LD+ + KYT E+
Sbjct: 250 SKILKQFKVERRYIICSIEIVKDFQCHVQVLKMWDIVRLEDIPKLAKSLDSEFRKYTDEY 309
Query: 782 INHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAENSNVSE 841
I CKE +G +E P +W T+N+ +FK++ N N SDL + D++N AENS + E
Sbjct: 310 ILCCKENGFDGKIECPLSWPRTANIRKFKSVGAN-NTEESDLVDSE-DAKNAAENSMIEE 367
Query: 842 SLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTTV 901
S LMKF LS H+ + R E+DLPFE+T+EQ +++ PRSTF+LGRSGTGKTT
Sbjct: 368 STLLMKFCALSP---DHMRTGRDDIEVDLPFELTEEQRNIVIFPRSTFVLGRSGTGKTT- 423
Query: 902 LTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKLC 961
LFVT+SP LC
Sbjct: 424 --------------------------------------------------LFVTLSPGLC 433
Query: 962 FAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHKFLM 1021
IK H+S K S + E+ ID +DI +SF+D+P YPLVITFHKFL+
Sbjct: 434 QEIKHHVSCFKRS------IGENVSID-------EDINDSFSDVPTNLYPLVITFHKFLL 480
Query: 1022 MLDGTLGSSYFDRFHDIRKH 1041
MLD TLG+SY RF D++
Sbjct: 481 MLDLTLGNSYIKRFSDLKNQ 500
>gi|38346801|emb|CAD41369.2| OSJNBa0088A01.8 [Oryza sativa Japonica Group]
Length = 893
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 212/564 (37%), Positives = 309/564 (54%), Gaps = 82/564 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ M + ++++LIWGPPGTGKTKT+S +L +L +TL C PTN
Sbjct: 291 LNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAMLIKGRKTLTCAPTN 349
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
+I E+A+R+V+LV R C D L DI+L GN +R+K+D G E I+LD R +
Sbjct: 350 TSILEVASRIVRLV-----RGCSDGSACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAE 404
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDN----------ESMKQSEDIN---- 191
RL CF P TGW HC S++D L+N V+ Y YI++ E+ ++ + N
Sbjct: 405 RLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIEDVLEKRKDIEKETAEKDQGENVPWR 464
Query: 192 ---GDIIKEKECGKEADVSDV-EIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGK 247
G+ EK+CG+ D + + PF +++D + ++ L CI P+ +
Sbjct: 465 MQFGNGSCEKKCGRPEDKEEASRLLPFKYYLKDGYNNLSQNLSYCIEILYNNHPRNSGTE 524
Query: 248 DNFHVMATLISLLDSFETLLF-----EDNLVSEELEELLSHSVDEGL-SKSIVGIKY--- 298
+F M ++ L+ ++ D E LE ++ D L S+ +V ++
Sbjct: 525 RSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDPVLWSEQLVSVQTSTC 584
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
+ K R +++L+ L LP+ + K + L+R L T SSS+ L+
Sbjct: 585 IKSKFRLARLLCVQELKYLVKNLELPNYYSIQPI----KLYLLQRTKCILCTVSSSFRLY 640
Query: 359 SVAM------------EP-----LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
+V M +P L L++DEAAQLKE E+ IPLQL GI AVL GDE Q
Sbjct: 641 NVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPLQLPGITQAVLIGDEYQ 700
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
LPA+V+SK+++ A FGRS+FERLS LGYSKHLL++QYRMHP IS FP + FY+ KI D S
Sbjct: 701 LPALVKSKIADNAFFGRSVFERLSLLGYSKHLLNVQYRMHPEISRFPVATFYDGKISDGS 760
Query: 462 TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDS 521
V + EK GR S +N +EV+ V++I+ L+K + +
Sbjct: 761 NV---TTEK-----------------NGR------SLKNTIEVATVLRIVQRLFKEAVST 794
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLG 545
+ KLS+G+VSPY+AQV AIQEK+G
Sbjct: 795 QSKLSVGVVSPYNAQVRAIQEKVG 818
>gi|115460118|ref|NP_001053659.1| Os04g0582600 [Oryza sativa Japonica Group]
gi|113565230|dbj|BAF15573.1| Os04g0582600, partial [Oryza sativa Japonica Group]
Length = 717
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 308/564 (54%), Gaps = 82/564 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV C+ M + ++++LIWGPPGTGKTKT+S +L +L +TL C PTN
Sbjct: 115 LNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAMLIKGRKTLTCAPTN 173
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE--EIYLDYRVK 145
+I E+A+R+V+LV R C D L DI+L GN +R+K+D G E I+LD R +
Sbjct: 174 TSILEVASRIVRLV-----RGCSDGSACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAE 228
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMK------------QSEDIN-- 191
RL CF P TGW HC S++D L+N V+ Y YI++ K Q E++
Sbjct: 229 RLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIEDVLEKRKDIEKETAEKDQGENVPWR 288
Query: 192 ---GDIIKEKECGKEADVSDV-EIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGK 247
G+ EK+CG+ D + + PF +++D + ++ L CI P+ +
Sbjct: 289 MQFGNGSCEKKCGRPEDKEEASRLLPFKYYLKDGYNNLSQNLSYCIEILYNNHPRNSGTE 348
Query: 248 DNFHVMATLISLLDSFETLLF-----EDNLVSEELEELLSHSVDEGL-SKSIVGIKY--- 298
+F M ++ L+ ++ D E LE ++ D L S+ +V ++
Sbjct: 349 RSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDPVLWSEQLVSVQTSTC 408
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
+ K R +++L+ L LP+ + K + L+R L T SSS+ L+
Sbjct: 409 IKSKFRLARLLCVQELKYLVKNLELPNYYSIQPI----KLYLLQRTKCILCTVSSSFRLY 464
Query: 359 SVAM------------EP-----LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
+V M +P L L++DEAAQLKE E+ IPLQL GI AVL GDE Q
Sbjct: 465 NVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPLQLPGITQAVLIGDEYQ 524
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
LPA+V+SK+++ A FGRS+FERLS LGYSKHLL++QYRMHP IS FP + FY+ KI D S
Sbjct: 525 LPALVKSKIADNAFFGRSVFERLSLLGYSKHLLNVQYRMHPEISRFPVATFYDGKISDGS 584
Query: 462 TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDS 521
V + EK GR S +N +EV+ V++I+ L+K + +
Sbjct: 585 NV---TTEK-----------------NGR------SLKNTIEVATVLRIVQRLFKEAVST 618
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLG 545
+ KLS+G+VSPY+AQV AIQEK+G
Sbjct: 619 QSKLSVGVVSPYNAQVRAIQEKVG 642
>gi|218191369|gb|EEC73796.1| hypothetical protein OsI_08493 [Oryza sativa Indica Group]
Length = 352
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 207/306 (67%), Gaps = 10/306 (3%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHS 359
L R++C L+KL+ + LP+ +K +ED F ++ A L TASSS LH
Sbjct: 54 LKDARAQC---LQKLKHISDHFELPNVFDKRSIED----FLVRNAKSILCTASSSSRLHY 106
Query: 360 VA-MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ P + LV+DEAAQLKE ES IPLQL G++HAVL G E QLPA+V+S+V +A FGR
Sbjct: 107 LPEASPFDLLVVDEAAQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGR 166
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFERLS LG+ KHLL +QYRMHP IS FP S FYENKI D V R YE++ L GPMY
Sbjct: 167 SLFERLSSLGHPKHLLDVQYRMHPGISKFPVSSFYENKISDCENVLHRDYERKPLAGPMY 226
Query: 479 GPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
G YSFINV G+E +H S N +EV+ V +I+ L+K +D+ KL +G+VSPY Q
Sbjct: 227 GSYSFINVDAGKESKGKHDKSLMNPIEVAAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQ 286
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
V AIQE+LG Y GF VKV S+DGFQG EED+II S VRSN GS+GFLSN R NV
Sbjct: 287 VRAIQERLGKAYETHGGFTVKVRSVDGFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNV 346
Query: 597 ALTRAR 602
ALTRA+
Sbjct: 347 ALTRAK 352
>gi|255564992|ref|XP_002523489.1| conserved hypothetical protein [Ricinus communis]
gi|223537317|gb|EEF38948.1| conserved hypothetical protein [Ricinus communis]
Length = 675
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 215/311 (69%), Gaps = 13/311 (4%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
CL+ ASL TASSS + +EPLN L+IDEA QL+E ES IPLQL G KHAVL GD
Sbjct: 333 CLRTASLVFCTASSS-SMLLSGLEPLNLLIIDEATQLRECESFIPLQLQGFKHAVLIGDN 391
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
CQL A V S VS A FGRSLFERL+ G SKH L+ QYR HP IS FPN FY N+I D
Sbjct: 392 CQLAATVTSNVSARAGFGRSLFERLTSFGCSKHTLNKQYRTHPLISSFPNFKFYANQIWD 451
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILLNLYKA 517
+ VR +S+ K FL P++GPYSFIN+ G EE C +NM E++ +MKI+ L+K
Sbjct: 452 APYVRNKSFLKCFLPDPVFGPYSFINISCGNEELDSLRCSFKNMAELATMMKIVQILFKE 511
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
W SK+KLS+GI+S Y+AQ VAI EK+G +Y N GF++KV +I GFQGGEED+II+STV
Sbjct: 512 WSKSKQKLSVGIISFYTAQFVAINEKVGRRYENLEGFSLKVDTIGGFQGGEEDVIILSTV 571
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
R++ GS F+SN +R+NVALTR ARTL +VW++++ +A +CF+NA
Sbjct: 572 RTSADGSSEFISNLQRINVALTR----------ARTLADSSTVWKSIIQEAKDCKCFYNA 621
Query: 638 DDDKDLGKAIL 648
++DK+L +L
Sbjct: 622 EEDKELVDVVL 632
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 91/129 (70%), Gaps = 8/129 (6%)
Query: 23 SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLV 82
S S LN+SQ + ++ L +++C+H+++++LIWGPPGTGK KT+S+LL ILL++K+RTL+
Sbjct: 214 SSSMQLNESQRKVIVDILCKLQCNHRSSVELIWGPPGTGKPKTLSILLYILLRIKYRTLI 273
Query: 83 CTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDY 142
C T+ A++ +A+RVVKLVK S C LG IL G+N KVD+ + EIYL++
Sbjct: 274 CAATDTAVQRVASRVVKLVKNS--SSC------SLGSILYFGDNGVAKVDTDIVEIYLNH 325
Query: 143 RVKRLADCF 151
+VK L C
Sbjct: 326 QVKSLDSCL 334
>gi|224135133|ref|XP_002327574.1| predicted protein [Populus trichocarpa]
gi|222836128|gb|EEE74549.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 314 bits (805), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/321 (51%), Positives = 231/321 (71%), Gaps = 6/321 (1%)
Query: 477 MYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
MYGPYSFINV G+EEF S +N+VEV+VV +++ +L+K + +++++S+G++SPY+A
Sbjct: 1 MYGPYSFINVASGKEEFDNGGSKKNLVEVAVVSEVVASLFKEFTRARKRMSVGVISPYNA 60
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QV AIQEK+G Y + FAV + S+DGFQGGEED+IIISTVR N G IGFL++ +RVN
Sbjct: 61 QVYAIQEKIGKTYSAHSDFAVNIRSVDGFQGGEEDVIIISTVRCNANGKIGFLADRQRVN 120
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELD 655
VALTRARHCLWILGN TL S+W+ LV DA R CF+N ++DK L KAI ELD
Sbjct: 121 VALTRARHCLWILGNGATLVNSDSIWKKLVTDAKERGCFYNVEEDKSLSKAITDAFLELD 180
Query: 656 ELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWR--PKKR 713
+LD LLN S LFR+ RWK FS +F KS K+ ++ ++ VI LL KLS+GWR P++R
Sbjct: 181 QLDALLNVNSPLFRNARWKFCFSNDFRKSILKVRNE-ARQEVISLLSKLSSGWRESPEER 239
Query: 714 NVDSVCGSSLHIIKQFKV-EGFYIICTIDIVKE-SQYFQVLKVWDILPLEDVPKVVARLD 771
+ G+S +++ ++V + ++I T+DI+KE S + Q+LKVWD+LPL D+PK+ LD
Sbjct: 240 IIVVRHGTSSLLLEHYRVNDQLHLIWTVDIIKENSNHTQILKVWDVLPLPDLPKLARHLD 299
Query: 772 NIYVKYTAEFINHCKEKSIEG 792
+++ YT + +N CK K IEG
Sbjct: 300 DVFGNYTVDKMNRCKHKCIEG 320
>gi|358348332|ref|XP_003638201.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355504136|gb|AES85339.1| Lupus brain antigen-like protein [Medicago truncatula]
Length = 1498
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 263/448 (58%), Gaps = 25/448 (5%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V+E C+ C +++ + L S N+SQ + + +CL + C+HK+T+ LI PGT
Sbjct: 230 VEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKEIGACLSSIGCNHKSTVDLICSSPGT 289
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
KTK + LL L +M RTLVC P+ VAIKE+A+ + +V++ + F LGD+
Sbjct: 290 EKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVASGGLSMVRQLFQ-------FCYLGDM 342
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
LL GN+E+L V ++EIYLDYRVK+L CF P GW +CF SM+ FL+NC + Y I
Sbjct: 343 LLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPSNGWKYCFTSMIHFLENCFTHYQMSIL 402
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKP---FLEFVRDRFKCIAAPLRSCIFNFC 237
N+ K+ N + K+ +SD +++ F+EF ++F+ IA PL+ I
Sbjct: 403 NQKTKEQVQTNDN---NSNTAKDDSLSDSDVRTHQSFVEFFIEKFQAIALPLKKYIHILR 459
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEEL---LSHSVDEGLSKSIV 294
T I + +I + N V+A L LDSFE L+ + N+VSE LEEL L S +
Sbjct: 460 THIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVSERLEELFYPLETRDSSSESDVVS 519
Query: 295 GIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
+ + ++C +L+ LQ S + LP V E ++ FCL+ ASL LSTAS S
Sbjct: 520 ADERSFLENITKCISLLKSLQVSLGKQKLPDIVT----EKSIREFCLQTASLMLSTASDS 575
Query: 355 YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEA 414
+MLHS+ ++PL+ +VIDEAAQLKE ES IPL L I HAVL GDE Q P++ VS EA
Sbjct: 576 FMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINHAVLIGDEHQQPSI----VSLEA 631
Query: 415 CFGRSLFERLSYLG-YSKHLLSIQYRMH 441
FGRSLF RL G + HLL+ Q+RMH
Sbjct: 632 DFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 30/200 (15%)
Query: 844 SLMKFYRLSSVVVSHLLSDR----VGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKT 899
SL RL +HLL+++ ++++LPF+++DEQ ++ILS RS+F+LGRSGTGKT
Sbjct: 636 SLFHRLRLQGRHPNHLLNEQHRMHYIKDVNLPFQISDEQNDIILSERSSFVLGRSGTGKT 695
Query: 900 TVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPK 959
T+LT KL ++E+ + QE EA LRQ+F+T+SPK
Sbjct: 696 TILTAKLLKREK--------------APFFRADQEEEA---------ACLRQMFITMSPK 732
Query: 960 LCFAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHKF 1019
LC + + + + KF + + A+F+++P+S + +SYPLV+TF KF
Sbjct: 733 LCHHVIYKLKRFRCGE--SKFFEDETAAYESSLAQFENVPDSLVGLSVDSYPLVLTFRKF 790
Query: 1020 LMMLDGTLGS-SYFDRFHDI 1038
LMM DG++G S+F+RF+D+
Sbjct: 791 LMMFDGSVGGVSFFERFNDL 810
>gi|358343481|ref|XP_003635830.1| Lupus brain antigen-like protein, partial [Medicago truncatula]
gi|355501765|gb|AES82968.1| Lupus brain antigen-like protein, partial [Medicago truncatula]
Length = 1232
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 263/448 (58%), Gaps = 25/448 (5%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V+E C+ C +++ + L S N+SQ + + +CL + C+HK+T+ LI PGT
Sbjct: 230 VEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKEIGACLSSIGCNHKSTVDLICSSPGT 289
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
KTK + LL L +M RTLVC P+ VAIKE+A+ + +V++ + F LGD+
Sbjct: 290 EKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVASGGLSMVRQLFQ-------FCYLGDM 342
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
LL GN+E+L V ++EIYLDYRVK+L CF P GW +CF SM+ FL+NC + Y I
Sbjct: 343 LLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPSNGWKYCFTSMIHFLENCFTHYQMSIL 402
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKP---FLEFVRDRFKCIAAPLRSCIFNFC 237
N+ K+ N + K+ +SD +++ F+EF ++F+ IA PL+ I
Sbjct: 403 NQKTKEQVQTNDN---NSNTAKDDSLSDSDVRTHQSFVEFFIEKFQAIALPLKKYIHILR 459
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEEL---LSHSVDEGLSKSIV 294
T I + +I + N V+A L LDSFE L+ + N+VSE LEEL L S +
Sbjct: 460 THIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVSERLEELFYPLETRDSSSESDVVS 519
Query: 295 GIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
+ + ++C +L+ LQ S + LP V E ++ FCL+ ASL LSTAS S
Sbjct: 520 ADERSFLENITKCISLLKSLQVSLGKQKLPDIVT----EKSIREFCLQTASLMLSTASDS 575
Query: 355 YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEA 414
+MLHS+ ++PL+ +VIDEAAQLKE ES IPL L I HAVL GDE Q P++ VS EA
Sbjct: 576 FMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINHAVLIGDEHQQPSI----VSLEA 631
Query: 415 CFGRSLFERLSYLG-YSKHLLSIQYRMH 441
FGRSLF RL G + HLL+ Q+RMH
Sbjct: 632 DFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 30/200 (15%)
Query: 844 SLMKFYRLSSVVVSHLLSDR----VGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKT 899
SL RL +HLL+++ ++++LPF+++DEQ ++ILS RS+F+LGRSGTGKT
Sbjct: 636 SLFHRLRLQGRHPNHLLNEQHRMHYIKDVNLPFQISDEQNDIILSERSSFVLGRSGTGKT 695
Query: 900 TVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPK 959
T+LT KL ++E+ + QE EA LRQ+F+T+SPK
Sbjct: 696 TILTAKLLKREK--------------APFFRADQEEEA---------ACLRQMFITMSPK 732
Query: 960 LCFAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHKF 1019
LC + + + + KF + + A+F+++P+S + +SYPLV+TF KF
Sbjct: 733 LCHHVIYKLKRFRCGE--SKFFEDETAAYESSLAQFENVPDSLVGLSVDSYPLVLTFRKF 790
Query: 1020 LMMLDGTLGS-SYFDRFHDI 1038
LMM DG++G S+F+RF+D+
Sbjct: 791 LMMFDGSVGGVSFFERFNDL 810
>gi|358343475|ref|XP_003635827.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|358348338|ref|XP_003638204.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355501762|gb|AES82965.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355504139|gb|AES85342.1| Lupus brain antigen-like protein [Medicago truncatula]
Length = 1654
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 263/448 (58%), Gaps = 25/448 (5%)
Query: 1 VDETCELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
V+E C+ C +++ + L S N+SQ + + +CL + C+HK+T+ LI PGT
Sbjct: 230 VEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKEIGACLSSIGCNHKSTVDLICSSPGT 289
Query: 61 GKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDI 120
KTK + LL L +M RTLVC P+ VAIKE+A+ + +V++ + F LGD+
Sbjct: 290 EKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVASGGLSMVRQLFQ-------FCYLGDM 342
Query: 121 LLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYID 180
LL GN+E+L V ++EIYLDYRVK+L CF P GW +CF SM+ FL+NC + Y I
Sbjct: 343 LLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPSNGWKYCFTSMIHFLENCFTHYQMSIL 402
Query: 181 NESMKQSEDINGDIIKEKECGKEADVSDVEIKP---FLEFVRDRFKCIAAPLRSCIFNFC 237
N+ K+ N + K+ +SD +++ F+EF ++F+ IA PL+ I
Sbjct: 403 NQKTKEQVQTNDN---NSNTAKDDSLSDSDVRTHQSFVEFFIEKFQAIALPLKKYIHILR 459
Query: 238 TRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEEL---LSHSVDEGLSKSIV 294
T I + +I + N V+A L LDSFE L+ + N+VSE LEEL L S +
Sbjct: 460 THIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVSERLEELFYPLETRDSSSESDVVS 519
Query: 295 GIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
+ + ++C +L+ LQ S + LP V E ++ FCL+ ASL LSTAS S
Sbjct: 520 ADERSFLENITKCISLLKSLQVSLGKQKLPDIVT----EKSIREFCLQTASLMLSTASDS 575
Query: 355 YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEA 414
+MLHS+ ++PL+ +VIDEAAQLKE ES IPL L I HAVL GDE Q P++ VS EA
Sbjct: 576 FMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINHAVLIGDEHQQPSI----VSLEA 631
Query: 415 CFGRSLFERLSYLG-YSKHLLSIQYRMH 441
FGRSLF RL G + HLL+ Q+RMH
Sbjct: 632 DFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 119/201 (59%), Gaps = 32/201 (15%)
Query: 844 SLMKFYRLSSVVVSHLLSDR----VGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKT 899
SL RL +HLL+++ ++++LPF+++DEQ ++ILS RS+F+LGRSGTGKT
Sbjct: 636 SLFHRLRLQGRHPNHLLNEQHRMHYIKDVNLPFQISDEQNDIILSERSSFVLGRSGTGKT 695
Query: 900 TVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPK 959
T+LT KL ++E+ + QE EA LRQ+F+T+SPK
Sbjct: 696 TILTAKLLKREK--------------APFFRADQEEEA---------ACLRQMFITMSPK 732
Query: 960 LCFAIKQHISQMKSSAFG-GKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHK 1018
LC + I ++K G KF + + A+F+++P+S + +SYPLV+TF K
Sbjct: 733 LCHHV---IYKLKRFRCGESKFFEDETAAYESSLAQFENVPDSLVGLSVDSYPLVLTFRK 789
Query: 1019 FLMMLDGTLGS-SYFDRFHDI 1038
FLMM DG++G S+F+RF+D+
Sbjct: 790 FLMMFDGSVGGVSFFERFNDL 810
>gi|242061192|ref|XP_002451885.1| hypothetical protein SORBIDRAFT_04g009255 [Sorghum bicolor]
gi|241931716|gb|EES04861.1| hypothetical protein SORBIDRAFT_04g009255 [Sorghum bicolor]
Length = 602
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 277/566 (48%), Gaps = 96/566 (16%)
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VE 136
R L C PTN AI+++A+R+++L K+ D LGD+LL GN +R+ + +G ++
Sbjct: 7 RVLTCAPTNTAIRQVASRLLELRKQQHPSGASDDGGGCLGDLLLFGNRQRMSIATGSSLD 66
Query: 137 EIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIK 196
+I+LD R+ RL CF+P TGW C S+ FL ++ + + G
Sbjct: 67 DIFLDTRLNRLRACFSPDTGWRQCLRSVEVFLSG---RPRWWLHEDRRRNQVTFTG---- 119
Query: 197 EKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATL 256
R RF I L SC +P+ I + N+ + L
Sbjct: 120 ----------------------RSRFHQILQRLSSCFRTIMLHVPRAIIMESNYINIFAL 157
Query: 257 ISLLDSFETLL-FEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQ 315
I +L F LL + + S E + +E L + V I F+ R L
Sbjct: 158 IDMLQGFSRLLDWMCCMCSGNERE----ACNEKLERYKVDIL-----------FLTRALN 202
Query: 316 SSFNELNLP-SAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAA 374
L LP + EK ++E FC + ASL T S S + M+ L+IDEAA
Sbjct: 203 RG---LKLPLTRSEKQIME-----FCFESASLVFCTVSGSAKMLGQRMD---LLLIDEAA 251
Query: 375 QLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLL 434
QLKE ES IPLQL G+KHAVL GDECQLPA V+SKV+ A GRS+FERLS G+ KHLL
Sbjct: 252 QLKECESLIPLQLYGLKHAVLIGDECQLPATVKSKVAASALLGRSMFERLSLQGHKKHLL 311
Query: 435 SIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
+IQYRMHPSIS FPN+ FY +KI D V + +E+ +L G M+GPYSFIN+ GREE
Sbjct: 312 NIQYRMHPSISIFPNTSFYSSKILDGPNVMQGGHERSYLEGAMFGPYSFINI-DGREE-S 369
Query: 495 EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF 554
S RNM EV+V+ +IL KL G S SA+ + +
Sbjct: 370 GRSKRNMAEVAVIKEIL-----------HKLKEGYASAGSARQLRRR------------- 405
Query: 555 AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLS-NSKRVNVALTRARHCLWILGNART 613
+ G +GG R SI L + L ARHCLWILGNA T
Sbjct: 406 ------VPGQRGGHHHPFD----RQVQQQSIHRLPLRAPTCKRRLDGARHCLWILGNAAT 455
Query: 614 LTRKKSVWEALVHDANARQCFFNADD 639
L S+W LV DA R C FN +D
Sbjct: 456 LHGSGSIWAELVRDAEKRGCLFNWND 481
>gi|356569408|ref|XP_003552893.1| PREDICTED: LOW QUALITY PROTEIN: helicase SEN1-like [Glycine max]
Length = 522
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 227/400 (56%), Gaps = 51/400 (12%)
Query: 270 DNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEK 329
DNL + ++ S D+G +SI+ L ++ EC L KL+S +LP+ +K
Sbjct: 158 DNLFKPKFKQT-SDGCDDG--ESILDCLGRLGIKKEEC---LVKLKSLSQTTSLPNITDK 211
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
+ F L A L TA+SS L + M P+ FLVID
Sbjct: 212 YEM----AKFYLMSARLIFCTAASSTKLFTDGMTPVEFLVID------------------ 249
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPN 449
V+S+VS EA +G SLFERL LG+ KHLL++QYRMHPSIS FPN
Sbjct: 250 ----------------VKSQVSQEAEYGSSLFERLVSLGHKKHLLNVQYRMHPSISVFPN 293
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMK 509
FYE +I D+ VR+ SY +R L G MY YSFIN+ G +NM E + V K
Sbjct: 294 KEFYEKQISDALFVREMSYNRRSLEGKMYDSYSFINIAKGNTVX-----KNMAEAAAVCK 348
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG-SKYVNSAGFAVKVMSIDGFQGGE 568
I+ +L ++ + +K+SIGI+SPY+ QV IQE++ V F+V V S+DGFQGGE
Sbjct: 349 IIESLENEFLSTGKKVSIGIISPYNGQVYEIQERITWQNLVXDPNFSVSVRSVDGFQGGE 408
Query: 569 EDLIII-STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
+D+III STVRSN G IGFL N +R NVALTR+RHCLWILGN +TL+ S+W LV+D
Sbjct: 409 DDIIIIISTVRSNGNGKIGFLDNRQRANVALTRSRHCLWILGNEKTLSSGDSLWRNLVND 468
Query: 628 ANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRL 667
A R CF NA DDK L KAI ++ DE +P +L
Sbjct: 469 AKKRGCFHNAXDDKKLAKAIEEEALRIEIPDESESPFKKL 508
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 3 ETCELC-SMQSEGVWNETFGPSL-SSTLNDSQAQAVLSCL--RQMRCDHKATIQLIWGPP 58
E C+LC S ++ V + + S LN SQ +AV+SC+ R++ H TI+LIWGPP
Sbjct: 15 ENCQLCFSGENHSVACSSVQNIIRSQNLNQSQKEAVVSCVTSRKVITHHNDTIKLIWGPP 74
Query: 59 GTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG 118
GTGKTKTV+ LL LL++K RTL C PTN A+ E+AAR+ LVKES+E D F +
Sbjct: 75 GTGKTKTVASLLFSLLKLKTRTLACAPTNTAVLEVAARLQNLVKESLECDT-----FGIR 129
Query: 119 DILLLGNNERLKVDS--GVEEIYLDYRVKRLADCFAP 153
DI++ GN R+KVDS + +++LD+RV L F P
Sbjct: 130 DIVVFGNRSRMKVDSYWCLHDVFLDFRVDNL---FKP 163
>gi|440577309|emb|CCI55316.1| PH01B001I13.12 [Phyllostachys edulis]
Length = 558
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 250/467 (53%), Gaps = 64/467 (13%)
Query: 155 TGWSHCFASMVDFLDNCVSLYHTYIDN--ESMK--------------------------Q 186
GW HC S++D L+N V+ Y +I++ E MK +
Sbjct: 96 AGWRHCLCSLIDLLENPVTKYKLHIEDILEKMKDREKESPKNDKWQAHRGKHNCENNVER 155
Query: 187 SEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIG 246
ED KE EA + PF +F++D +K ++ L CI P+
Sbjct: 156 PEDEKEKYRKEGWYVSEAMEEAFTVLPFKDFLKDHYKKLSGNLCDCIEILYNDHPRNSET 215
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEEL--EELLSHSVDEGLSKSIVGIKYLLHKRR 304
+ F M ++ L+ L+ D + + ++ ELL ++E I+ L + R
Sbjct: 216 RQCFQCMLEVLELIKILHILINCD-MDNGDIWSNELLESKIEED-GNPILWSGQLAYVRT 273
Query: 305 SECH---------FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY 355
+ C +++L+ L LP+ + +K + L+R L T SSS+
Sbjct: 274 NTCKKSKFRLSRSLCVQELRYLCKNLELPNC----YITRPIKVYLLQRTRCILCTVSSSF 329
Query: 356 MLHSVAMEP----------------LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L++V M+ L L++DEAAQ+KE E+ IPLQL GI+ AV GDE
Sbjct: 330 RLYNVPMDNSSSDVYGVFKKPETSNLELLIVDEAAQVKECETLIPLQLPGIRLAVFIGDE 389
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
Q P++V+SK+S+ A FGRS+FERLS LGYSKHLLS+QYRMHP IS FP + FY+ KI D
Sbjct: 390 NQ-PSLVKSKISDNANFGRSVFERLSLLGYSKHLLSVQYRMHPEISKFPVATFYDGKISD 448
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKA 517
V ++Y++RFL ++GPYSFINV GG E +H S +N +EV+ V++I+ L+K
Sbjct: 449 GPNVTSKNYDRRFLASKIFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLRIVQRLFKE 508
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
+ + KL++G+VSPY+AQV AIQE++G Y GF+VKV S+DGF
Sbjct: 509 SVSTGSKLTVGVVSPYNAQVRAIQERVGKSYNMYDGFSVKVKSVDGF 555
>gi|218187407|gb|EEC69834.1| hypothetical protein OsI_00158 [Oryza sativa Indica Group]
Length = 1317
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 288/615 (46%), Gaps = 68/615 (11%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP 85
S LN Q ++ S + + C I+LI GPPG+GKT+ LL +L M + L+C P
Sbjct: 442 SHLNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCAP 501
Query: 86 TNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
+K L D FPL D L+L N +DS
Sbjct: 502 KTNIVKFLTN--------------LDKCLFPLEDALVLDN-----LDS-----------T 531
Query: 146 RLADCFAPLTGWSHCFASMV-DFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEA 204
LA F HC DFL ++L+ ++ + +N D ++C E
Sbjct: 532 ELAKEFQ-----RHCLCHRSQDFLVG-ITLFKKWLREMFVL----LNLDPYCTEKCDHEP 581
Query: 205 DVSDVEIKPFLEFVRDRFKCIAAPL---RSCIFNFCTRIPKCYIGKDNFHVMATLISLLD 261
L F FK L + + N R + Y+ D + + L+SLL
Sbjct: 582 TRIRCSTNSLLVFTLSSFKEKFTKLLMRKEWLTNLKERFSEIYLSADIANDITNLLSLLK 641
Query: 262 SFETLLFEDNLVSEELEELLS-HSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
FE LL + L + ++ SV L + K L+ R +C +++ +SS
Sbjct: 642 DFEDLLCHERLQDKRVQWTFGLSSVPCKLGGNSAARK--LNDLRLQCVDFIQRFRSS--- 696
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L LP E+ LED FC+K A + +ST S++ LH AMEP+N ++D+AA++ E +
Sbjct: 697 LKLPKLEERKSLED----FCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECD 752
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
IPL+L + H ++ GD+ L SKV A F + F+RL LG+ KH+L+ QY +
Sbjct: 753 LIIPLRLP-VTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAI 808
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRN 500
HPSI FPN FYE +I + +TV Y K+F G + Y FI+V G SC+N
Sbjct: 809 HPSIWQFPNEKFYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKN 863
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
+E++ + + +L + ++ E + +G++ + V I+ LG KY V + S
Sbjct: 864 TIELATI-QYMLEIISQGLEDTEVIDVGVLCLCGSNVGGIKSSLGKKYATHNKINVHIES 922
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D F+G L+I+S + + + +++N ALTRARHCLW+ G +++ + +
Sbjct: 923 ADSFEGETYHLVILSMLFKDENTILQI----EKINAALTRARHCLWMFGEVDSVSNRGGI 978
Query: 621 WEALVHDANARQCFF 635
+ LVHD R+C
Sbjct: 979 FAELVHDVIERKCIL 993
>gi|125570250|gb|EAZ11765.1| hypothetical protein OsJ_01634 [Oryza sativa Japonica Group]
Length = 1147
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 288/614 (46%), Gaps = 66/614 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP 85
S LN Q ++ S + + C I+LI GPPG+GKT+ LL +L M + L+C P
Sbjct: 272 SHLNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCAP 331
Query: 86 TNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
+K L D FPL D L+L N + ++ + + L +R +
Sbjct: 332 KTNIVKFLTN--------------LDKCLFPLEDALVLDNLDSTELAKEFQRLCLCHRSQ 377
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
DFL ++L+ ++ + +N D ++C E
Sbjct: 378 --------------------DFLVG-ITLFKKWLREMFVL----LNLDPYCTEKCDHEPT 412
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPL---RSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
L F FK L + + N R + Y+ D + + L+SLL
Sbjct: 413 RIRCSTNSLLVFTLSSFKEKFTKLLMRKEWLTNLKERFSEIYLSADIANDITNLLSLLKD 472
Query: 263 FETLLFEDNLVSEELEELLS-HSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNEL 321
FE LL + L + ++ SV L + K L+ R + +++ +SS L
Sbjct: 473 FEDLLCHERLQDKRVQWTFGLSSVPCKLGGNSAARK--LNDLRLQYVDFIQRFRSS---L 527
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
LP E+ LED FC+K A + +ST S++ LH AMEP+N ++D+AA++ E +
Sbjct: 528 KLPKLEERKSLED----FCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECDL 583
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
IPL+L + H ++ GD+ L SKV A F + F+RL LG+ KH+L+ QY +H
Sbjct: 584 IIPLRLP-VTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAIH 639
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNM 501
PSI FPN FYE +I + +TV Y K+F G + Y FI+V G SC+N
Sbjct: 640 PSIWQFPNEKFYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKNT 694
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
+E++ + + +L + ++ E + +G++ + V I+ LG KY V + S
Sbjct: 695 IELATI-QYMLKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKKYATHNKINVHIESA 753
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D F+G L+I+S + + + +++N ALTRARHCLW+ G +++ + ++
Sbjct: 754 DSFEGETYHLVILSMLFKDENTILQI----EKINAALTRARHCLWMFGEVDSVSDRGGIF 809
Query: 622 EALVHDANARQCFF 635
LVHD R+C
Sbjct: 810 AELVHDVIERKCIL 823
>gi|77552197|gb|ABA94994.1| hypothetical protein LOC_Os11g42910 [Oryza sativa Japonica Group]
Length = 1263
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 288/614 (46%), Gaps = 66/614 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP 85
S LN Q ++ S + + C I+LI GPPG+GKT+ LL +L M + L+C P
Sbjct: 441 SHLNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCAP 500
Query: 86 TNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
+K L D FPL D L+L N + ++ + + L +R +
Sbjct: 501 KTNIVKFLTN--------------LDKCLFPLEDALVLDNLDSTELAKEFQRLCLCHRSQ 546
Query: 146 RLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEAD 205
DFL ++L+ ++ + +N D ++C E
Sbjct: 547 --------------------DFLVG-ITLFKKWLREMFVL----LNLDPYCTEKCDHEPT 581
Query: 206 VSDVEIKPFLEFVRDRFKCIAAPL---RSCIFNFCTRIPKCYIGKDNFHVMATLISLLDS 262
L F FK L + + N R + Y+ D + + L+SLL
Sbjct: 582 RIRCSTNSLLVFTLSSFKEKFTKLLMRKEWLTNLKERFSEIYLSADIANDITNLLSLLKD 641
Query: 263 FETLLFEDNLVSEELEELLS-HSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNEL 321
FE LL + L + ++ SV L + K L+ R + +++ +SS L
Sbjct: 642 FEDLLCHERLQDKRVQWTFGLSSVPCKLGGNSAARK--LNDLRLQYVDFIQRFRSS---L 696
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESES 381
LP E+ LED FC+K A + +ST S++ LH AMEP+N ++D+AA++ E +
Sbjct: 697 KLPKLEERKSLED----FCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECDL 752
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
IPL+L + H ++ GD+ L SKV A F + F+RL LG+ KH+L+ QY +H
Sbjct: 753 IIPLRLP-VTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAIH 808
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNM 501
PSI FPN FYE +I + +TV Y K+F G + Y FI+V G SC+N
Sbjct: 809 PSIWQFPNEKFYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKNT 863
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
+E++ + + +L + ++ E + +G++ + V I+ LG KY V + S
Sbjct: 864 IELATI-QYMLKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKKYATHNKINVHIESA 922
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D F+G L+I+S + + + +++N ALTRARHCLW+ G +++ + ++
Sbjct: 923 DSFEGETYHLVILSMLFKDENTILQI----EKINAALTRARHCLWMFGEVDSVSDRGGIF 978
Query: 622 EALVHDANARQCFF 635
LVHD R+C
Sbjct: 979 AELVHDVIERKCIL 992
>gi|125577857|gb|EAZ19079.1| hypothetical protein OsJ_34605 [Oryza sativa Japonica Group]
Length = 1038
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/621 (27%), Positives = 292/621 (47%), Gaps = 53/621 (8%)
Query: 19 TFGPSLSSTL---NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
FG SS L N+ Q A+ + ++ C H ++ L+WGPPGTGKT+ + L + +L
Sbjct: 247 AFGIEDSSYLEKYNEEQQCAMTCIMSKVGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLN 306
Query: 76 MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL--LGNNERLKVDS 133
++ R LVC P R + + +S+++ D F G ++L L N+E +K +
Sbjct: 307 LRLRILVCVPKK--------RDIHIFLQSLQK--VDPSFDFRGIVVLNRLSNSESIKNCN 356
Query: 134 GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGD 193
+ E+ L+ R + L C + ++ C K+ D +G
Sbjct: 357 KLHEMNLENRAQALYCCIFLWRSFVKELGFVLGLKPYC-------------KEKCDHDGC 403
Query: 194 IIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVM 253
I C K S + + F F +++ +A + C + + N ++
Sbjct: 404 TI----CSK----SKLAVFSFSSF-KEKVCALAVDVEKCSRILIDSLSDILLSNYNIEIL 454
Query: 254 ATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-LHKRRSECHFVLR 312
L+S L E + ++ +E+ + S VG L++ R C L
Sbjct: 455 NKLLSGLSHLEDRIKNSDITQSGVEKEFGLASGIDFSWEEVGCNVAELNEIRMTC---LG 511
Query: 313 KLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDE 372
++ N + LP ++ LE+ FC++ + + + T S L + ++ ++ L++D+
Sbjct: 512 LIEVVMNSIELPQLDDRKDLEE----FCIRHSRIIICTPVCSSQLRELKLDTIDILLVDD 567
Query: 373 AAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH 432
AAQ+KE + IPL S +H V+FGD L MV+S+V EA + SLF+RL +
Sbjct: 568 AAQIKEIDMLIPLSFSP-RHIVMFGDHLHLQPMVKSEVCKEAGYASSLFQRLMHSSSENK 626
Query: 433 LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE 492
L+ QY M PSIS F + FYE +++D STV+ Y K P+ Y F ++ G E
Sbjct: 627 RLTKQYMMDPSISQFVSENFYEGRLKDDSTVKSDDYNKLLKEFPVPA-YGFFDISGVDE- 684
Query: 493 FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA 552
+ + VE SV+M +L L K ++ K+++GI+ Y+ ++ A++ LG KY N
Sbjct: 685 -LTGKGKGFVESSVIMFLLQFLCKGRTNAIGKINVGIICLYNNRMDALRNLLGIKYENHD 743
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+ D++I+S+V L ++NVA +R+R+CLWI+G +
Sbjct: 744 RINIEVNSLGNLHEKWYDVVILSSVSDEKAE----LLEGSKMNVAFSRSRYCLWIIGEGK 799
Query: 613 TLTRKKSVWEALVHDANARQC 633
L + +W+ L+ A C
Sbjct: 800 NLIASEDLWKKLIGYAKNLHC 820
>gi|357168354|ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839489 [Brachypodium
distachyon]
Length = 1806
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 169/266 (63%), Gaps = 18/266 (6%)
Query: 777 YTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYA-E 835
YT ++++HC+ +G LEVP W +++R+K D DL R+YA E
Sbjct: 2 YTDDYLDHCRRVQTQGKLEVPMVWDVEHDIIRYKKDCKADAQEEQDLV-----DRSYAME 56
Query: 836 NSNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSG 895
NS VSE LMKFY LSS V HLL+ G E+D+PFE+TDE+ +I P ++FILGRSG
Sbjct: 57 NSKVSECFLLMKFYSLSSGVAKHLLTATDGSEIDIPFELTDEEEVIIQFPLTSFILGRSG 116
Query: 896 TGKTTVLTRKLFQKEELHRMAMEEFYGVN-NSVTLHCSQESEAEEGLGETERPILRQLFV 954
TGKTTVLT KL QKE+ +A + G+N ++++ + + +GE+ ++Q+F+
Sbjct: 117 TGKTTVLTMKLIQKEQQSLIASQ---GLNLDAISGANDKNIMPVKDVGESS---VKQVFI 170
Query: 955 TVSPKLCFAIKQHISQMKSSAFGGKFVAESSLI----DIDDEAEFKDIPNSFADIPAESY 1010
TVSPKLC AIK HI ++K + G ++S++ IDD EF +IP++F+D+P E Y
Sbjct: 171 TVSPKLCSAIKNHICRLKRFS-SGDVSDDTSILHMHDSIDDLEEFTEIPDNFSDLPHEHY 229
Query: 1011 PLVITFHKFLMMLDGTLGSSYFDRFH 1036
PL IT+ KFLMMLDGT +S+FD F+
Sbjct: 230 PLTITYRKFLMMLDGTCKTSFFDVFY 255
>gi|222618365|gb|EEE54497.1| hypothetical protein OsJ_01623 [Oryza sativa Japonica Group]
Length = 1157
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/622 (27%), Positives = 289/622 (46%), Gaps = 65/622 (10%)
Query: 19 TFGPSLSSTL---NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
FG SS L N+ Q A+ + + C H ++ L+WGPPGTGKT+ + L + +L
Sbjct: 375 AFGIEDSSYLDKYNEEQQCAMTCIMSKAGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLN 434
Query: 76 MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGV 135
++ R LVC P R + + +S++ + F +G L+L N + + +
Sbjct: 435 LRLRILVCVPLK--------RDIHIFLKSLQENYPS---FNIGKALVLNNLLDKDMCNII 483
Query: 136 EEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDII 195
E L R L + L W M L Y + + ED+
Sbjct: 484 SETTLANRASEL---YVALFVWKAWVKEMAALLG-----LDMYCRKKCVHHDEDLT---- 531
Query: 196 KEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMAT 255
C K +E L + +F A LR C + + + +
Sbjct: 532 ----CNK---CEPIEFS--LMSFKKKFGNTAVELRKCSTCLIKSLSATSLSDLDVTNVNN 582
Query: 256 LISLLDSFETLLFEDNLVSEELEEL--LSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRK 313
L+ L FE L+ + + ++ ++ +VD K L RR+ L
Sbjct: 583 LLIALSQFENLMQKSEISDYSVKRAFGITIAVDYDFEDCCTA-KSLDQIRRT----CLAL 637
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEA 373
++ + + LP LED FC++ + + +ST L S+ M+ ++ L++D+A
Sbjct: 638 TETVLSSIELPQLEGWSDLED----FCIRHSHIIISTPGCFARLQSLKMDQVDVLIVDKA 693
Query: 374 AQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL 433
AQ+KE++ +PL + +H VL GD L +V+++ EA RSLF+RL +L +++H
Sbjct: 694 AQIKENDLLVPLSIPP-RHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLSFTRHK 752
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L QY MHP I FP+ +FY++KI D +V E L P Y + +++ E+F
Sbjct: 753 LIKQYMMHPLIRQFPSEHFYKDKIVDGQSV-----ESINLQFPAYTFFDVVDM----EDF 803
Query: 494 IEHSC--RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
SC + +E +VV+ +L L + ++ +L++GIV S QV AI +LG KY N
Sbjct: 804 ---SCMGKKSMEAAVVLFLLQKLCEGLTNAAGRLNVGIVCFCSNQVNAIITQLGRKYQNH 860
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
++V S++ D+II+S++ + L R+NVALT++RHCLWI+G A
Sbjct: 861 DRVNLEVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLWIIGQA 916
Query: 612 RTLTRKKSVWEALVHDANARQC 633
L + W++L+H + + C
Sbjct: 917 DILLQIPGTWKSLIHHSMQQNC 938
>gi|77552192|gb|ABA94989.1| hypothetical protein LOC_Os11g42860 [Oryza sativa Japonica Group]
Length = 1197
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 173/627 (27%), Positives = 290/627 (46%), Gaps = 65/627 (10%)
Query: 19 TFGPSLSSTL---NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
FG SS L N+ Q A+ + + C H ++ L+WGPPGTGKT+ + L + +L
Sbjct: 395 AFGIEDSSYLDKYNEEQQCAMTCIMSKAGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLN 454
Query: 76 MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGV 135
++ R LVC P R + + +S++ + F +G L+L N + + +
Sbjct: 455 LRLRILVCVPLK--------RDIHIFLKSLQENYPS---FNIGKALVLNNLLDKDMCNII 503
Query: 136 EEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDII 195
E L R L + L W M L Y + + ED+
Sbjct: 504 SETTLANRASEL---YVALFVWKAWVKEMAALLG-----LDMYCRKKCVHHDEDLT---- 551
Query: 196 KEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMAT 255
C K +E L + +F A LR C + + + +
Sbjct: 552 ----CNK---CEPIEFS--LMSFKKKFGNTAVELRKCSTCLIKSLSATSLSDLDVTNVNN 602
Query: 256 LISLLDSFETLLFEDNLVSEELEEL--LSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRK 313
L+ L FE L+ + + ++ ++ +VD K L RR+ L
Sbjct: 603 LLIALSQFENLMQKSEISDYSVKRAFGITIAVDYDFEDCCTA-KSLDQIRRT----CLAL 657
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEA 373
++ + + LP LED FC++ + + +ST L S+ M+ ++ L++D+A
Sbjct: 658 TETVLSSIELPQLEGWSDLED----FCIRHSHIIISTPGCFARLQSLKMDQVDVLIVDKA 713
Query: 374 AQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL 433
AQ+KE++ +PL + +H VL GD L +V+++ EA RSLF+RL +L +++H
Sbjct: 714 AQIKENDLLVPLSIPP-RHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLSFTRHK 772
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L QY MHP I FP+ +FY++KI D +V E L P Y + +++ E+F
Sbjct: 773 LIKQYMMHPLIRQFPSEHFYKDKIVDGQSV-----ESINLQFPAYTFFDVVDM----EDF 823
Query: 494 IEHSC--RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
SC + +E +VV+ +L L + ++ +L++GIV S QV AI +LG KY N
Sbjct: 824 ---SCMGKKSMEAAVVLFLLQKLCEGLTNAAGRLNVGIVCFCSNQVNAIITQLGRKYQNH 880
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
++V S++ D+II+S++ + L R+NVALT++RHCLWI+G A
Sbjct: 881 DRVNLEVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLWIIGQA 936
Query: 612 RTLTRKKSVWEALVHDANARQCFFNAD 638
L + W++L+H + + C D
Sbjct: 937 DILLQIPGTWKSLIHHSMQQNCVVVLD 963
>gi|242035239|ref|XP_002465014.1| hypothetical protein SORBIDRAFT_01g030480 [Sorghum bicolor]
gi|241918868|gb|EER92012.1| hypothetical protein SORBIDRAFT_01g030480 [Sorghum bicolor]
Length = 918
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 213/408 (52%), Gaps = 55/408 (13%)
Query: 5 CELCSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTK 64
C+ C +S +E G + LNDSQ AV SC+ C H++++ L+WGPPGTGKT
Sbjct: 8 CKYCINKSH---DEIKGDLCNFELNDSQLDAVASCVLASECSHRSSVGLVWGPPGTGKTT 64
Query: 65 TVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
TV+++L +LL + RTL C PTN+A+ ++A+R+++L+ + R+ + LGDI+L G
Sbjct: 65 TVAVMLQMLLMKEQRTLACAPTNMAVLQVASRLLELIGDFSLRE-----HYSLGDIILFG 119
Query: 125 NNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESM 184
N +RL++ + EIYLD RV++L F GW HC S+V FL +C+S Y T +D +
Sbjct: 120 NKDRLQIGKLLSEIYLDDRVQKLLSNFNRQHGWKHCVDSVVTFLVHCISRYRTSVD---I 176
Query: 185 KQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCY 244
+Q D D+ K ++ RF +A L CI F +P+
Sbjct: 177 QQG---------------SGDARDLTFK---KYFTSRFSTLANELVRCIDTFFDHLPRSS 218
Query: 245 IGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDE-----GLSKSIVGIKYL 299
+GK NF M + SL+ + L DN VS+EL + + DE G ++
Sbjct: 219 LGK-NFDKMMSAKSLVGKLQQSLSADN-VSDELLFTIFNPADEVPDSSGSHDDLIDDADD 276
Query: 300 LHKR----------RSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLS 349
H +S C L L +++ LP E ++ CLK A L
Sbjct: 277 FHDTNISLDSPLDIKSHCIKTLMAL----SKMRLPCEDN----EPSIRELCLKHAKLIFC 328
Query: 350 TASSSYMLHSV-AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 396
TASSS+ L + ++ P++ LVIDEAAQLKE ES +PL L GI+H +L
Sbjct: 329 TASSSFELFRLQSVRPISILVIDEAAQLKECESLVPLLLQGIEHVLLI 376
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 44/169 (26%)
Query: 459 DSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYK 516
D V+++ Y K +L GP+YG YSFI++ E + + S +NM EV+VV I+ L K
Sbjct: 377 DGPIVKQKDYAKSYLPGPIYGAYSFIHIDNDMEMLDSLGQSSKNMAEVAVVANIIERLAK 436
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
A QV+A+Q+KLG K+ +V V SIDGFQGGEED+I+IST
Sbjct: 437 A------------------QVIALQDKLGRKFEKHDFLSVTVKSIDGFQGGEEDIILIST 478
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
V R+CLWILGN TL S+W LV
Sbjct: 479 V------------------------RYCLWILGNGTTLLASNSIWADLV 503
>gi|218187408|gb|EEC69835.1| hypothetical protein OsI_00159 [Oryza sativa Indica Group]
Length = 1186
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 166/621 (26%), Positives = 289/621 (46%), Gaps = 53/621 (8%)
Query: 19 TFGPSLSSTL---NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
FG SS L N+ Q A+ + ++ C H ++ L+WGPPGTGKT+ + L + +L
Sbjct: 395 AFGIEDSSYLEKYNEEQQCAMTCIMSKVGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLN 454
Query: 76 MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL--LGNNERLKVDS 133
++ R LVC P R + + +S+++ D F G ++L L N+E +K +
Sbjct: 455 LRLRILVCVPKK--------RDIHIFLQSLQK--VDPSFDFRGIVVLNRLSNSESIKNCN 504
Query: 134 GVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGD 193
E+ L+ R + L C + ++ C K+ D +G
Sbjct: 505 KFHEMNLENRAQALYCCIFLWRSFVKELGFVLGLKPYC-------------KEKCDHDGC 551
Query: 194 IIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVM 253
I C K S + + F F +++ +A + C + + N ++
Sbjct: 552 TI----CSK----SKLAVFSFSSF-KEKVCALAIDVEKCSRILIDSLSDILLSNYNIEIL 602
Query: 254 ATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-LHKRRSECHFVLR 312
L+S L E + ++ +E+ + S VG L++ R C L
Sbjct: 603 NKLLSSLSHLEDRIKNSDITQSGVEKEFGLASGIDFSWEEVGCNVAELNEIRMTC---LG 659
Query: 313 KLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDE 372
++ N + P ++ LE+ FC++ + + + T S L + ++ ++ L++D+
Sbjct: 660 LIEVVMNSIEFPQLDDRKDLEE----FCIRHSRIIICTPVCSSQLRELKLDIIDILLVDD 715
Query: 373 AAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH 432
AAQ+KE + IPL S +H V+FGD L MV+S+V EA + SLF+RL +
Sbjct: 716 AAQIKEIDMLIPLSFSP-RHIVMFGDHLHLQPMVKSEVCKEAGYASSLFQRLMHSSSENK 774
Query: 433 LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE 492
L+ QY M PSIS F + FYE ++ D STV+ Y K P+ Y F ++ G E
Sbjct: 775 RLTKQYMMDPSISQFVSENFYEGRLEDDSTVKSDDYNKLLKEFPVPA-YGFFDISGVDE- 832
Query: 493 FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA 552
+ + VE SV+M +L L K ++ K+++GI+ Y+ ++ A++ LG KY +
Sbjct: 833 -LTGKGKGFVESSVIMFLLQFLCKGRTNAIGKINVGIICLYNNRMDALRNLLGIKYESHD 891
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+ D++I+S+V L ++NVA +R+R+CLWI+G +
Sbjct: 892 RINIEVNSLGNLHEKWYDVVILSSVSDEKAE----LLEGSKMNVAFSRSRYCLWIIGEGK 947
Query: 613 TLTRKKSVWEALVHDANARQC 633
L + +W+ L+ A C
Sbjct: 948 NLIASEDLWKKLIGYAKNLHC 968
>gi|357140222|ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
distachyon]
Length = 1452
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 180/326 (55%), Gaps = 10/326 (3%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 951 EDARSSLEASFANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLAL- 1009
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1010 GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFP 1069
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSV 506
+ YFY+ ++ DS +V K E + + PY F ++ GRE S +N+ E
Sbjct: 1070 SRYFYQGRLTDSESVVKLPDEA-YYRDALMSPYIFYDISHGRESHRGGSSSYQNVHEAQF 1128
Query: 507 VMKILLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+++ +L K + +K+S+GI++PY Q+ +Q + G + + ++D FQ
Sbjct: 1129 ALRLYEHLQKLMKANGGKKVSVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQ 1188
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + + W ALV
Sbjct: 1189 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED-WAALV 1246
Query: 626 HDANARQCFFNADDDKDLGKAILAVK 651
DA AR+CF + D + K LA+K
Sbjct: 1247 TDAKARKCFMDLD---SIPKDFLAMK 1269
>gi|224082154|ref|XP_002306584.1| predicted protein [Populus trichocarpa]
gi|222856033|gb|EEE93580.1| predicted protein [Populus trichocarpa]
Length = 1147
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 173/307 (56%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 739 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLAL-GAARCV 797
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY+
Sbjct: 798 LVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQ 857
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V E + P+ PY F +V GRE S +N+ E +++
Sbjct: 858 GRLTDSESVANLPDET-YYKDPLLRPYLFYDVTHGRESHRGGSVSYQNIHEAQFCLQLYE 916
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L K+ ++++GI++PY Q+ +Q++ + + G + + ++D FQG E D+
Sbjct: 917 HLQKSLKSLGMGRITVGIITPYKLQLKCLQQEFSAVLKSEEGKDIYINTVDAFQGQERDV 976
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++N G +GF+++ +R+NVALTRA+ LW++GNA +L + W ALV DA AR
Sbjct: 977 IIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNATSLVQSDD-WSALVADAKAR 1034
Query: 632 QCFFNAD 638
C+ N D
Sbjct: 1035 NCYMNMD 1041
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 193/327 (59%), Gaps = 20/327 (6%)
Query: 318 FNELNLPSAVEK---DLLEDLLKSFC---LKRASLFLSTASSSYMLHSV-AMEPLNFLVI 370
F E+ EK D+LE K+ L + ++ LST S S + A++ + ++I
Sbjct: 994 FKEIQATKDSEKKVSDVLESARKNMAHSLLNKCNIILSTLSGSGHQETFSAIKKFDVVII 1053
Query: 371 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS 430
DEAAQ E + IPL+ + +K +L GD QLP + S+++++ + SLF+RLS G
Sbjct: 1054 DEAAQAVEPSTLIPLKHNVMK-CILVGDPNQLPPTIISRMASQYQYETSLFQRLSSCGIP 1112
Query: 431 KHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGR 490
+ +L +QYRMHPSIS FP+ +FY N + D V+ +Y + F P +GP+ F +++
Sbjct: 1113 QQVLKVQYRMHPSISRFPSRHFYMNVLEDGPNVK--NYTEEFYKDPRFGPFIFYDIYDSN 1170
Query: 491 EEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYV 549
EE HS +N+ E +V ++ NL ++ + K+ SIG+++PY QV I+ ++ V
Sbjct: 1171 EESGPGHSLKNVTEAKLVALLITNLENSFPNIKK--SIGVITPYKQQVHEIKRRISP--V 1226
Query: 550 NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
N + V S+DGFQG E+D+II S VR++ GG+IGFLS+ +R+NV LTRAR L ++G
Sbjct: 1227 NQD---IDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDVRRMNVGLTRARSSLIVIG 1283
Query: 610 NARTLTRKKSVWEALV-HDANARQCFF 635
N+ L + WEALV H N +F
Sbjct: 1284 NS-NLLKLNPDWEALVMHSINVLNGYF 1309
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 16/85 (18%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF----- 78
L S LN SQ +A+ L H T L+ GPPGTGKTKT+ LL +LL
Sbjct: 807 LLSELNSSQMEAIYHSL----IPHGFT--LLQGPPGTGKTKTIMALLSVLLSTPLDSKIN 860
Query: 79 -----RTLVCTPTNVAIKELAARVV 98
+ LVC P+N A+ E+A+R++
Sbjct: 861 STAPPKILVCAPSNAAVDEIASRII 885
>gi|449465617|ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Cucumis sativus]
Length = 1363
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 172/311 (55%), Gaps = 7/311 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 944 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL- 1002
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1003 GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFP 1062
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSV 506
+ YFY+ ++ DS +V E + P+ PY+F ++ GRE S +N+ E
Sbjct: 1063 SRYFYQGRLTDSESVANLPDET-YYKDPLLRPYTFFDITHGRESHRGGSVSYQNIHEAQF 1121
Query: 507 VMKILLNLYKAWIDSK-EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+++ +L K S K+S+GI++PY Q+ +Q + + G + + ++D FQ
Sbjct: 1122 CLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQ 1181
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + W AL+
Sbjct: 1182 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSDD-WAALI 1239
Query: 626 HDANARQCFFN 636
DA AR C+ +
Sbjct: 1240 TDAKARNCYMD 1250
>gi|413934411|gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
Length = 1399
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 7/313 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 990 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL- 1048
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1049 GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFP 1108
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSV 506
+ YFY+ ++ DS +V K E + + PY F ++ GRE S +N+ E
Sbjct: 1109 SKYFYQGRLTDSESVVKLPDEA-YYRDALMAPYIFYDLSHGRESHRGGSSSYQNIHEAQF 1167
Query: 507 VMKILLNLYK-AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+++ +L K + +K+S+GI++PY Q+ +Q + G + + ++D FQ
Sbjct: 1168 ALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYINTVDAFQ 1227
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + + W +L+
Sbjct: 1228 GQERDIIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED-WASLI 1285
Query: 626 HDANARQCFFNAD 638
DA AR+CF + D
Sbjct: 1286 ADAKARKCFMDLD 1298
>gi|147779903|emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 7/308 (2%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+L SF + +F + +SS L S + +VIDEAAQ E PL L G
Sbjct: 994 NLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL-GAARC 1052
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY
Sbjct: 1053 VLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFY 1112
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKIL 511
+ ++ DS +V E + P+ PY F ++ GRE S +N+ E + +++
Sbjct: 1113 QGRLTDSESVTNLPDEA-YYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLY 1171
Query: 512 LNLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+L K K+S+GI++PY Q+ +Q + + G + + ++D FQG E D
Sbjct: 1172 EHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERD 1231
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+II+S VR+++ G +GF+++ +R+NVALTRAR LW++GNA L + W AL+ DA A
Sbjct: 1232 VIIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALMQSDD-WAALISDARA 1289
Query: 631 RQCFFNAD 638
R C+ + D
Sbjct: 1290 RSCYLDMD 1297
>gi|218184058|gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indica Group]
Length = 1360
Score = 199 bits (506), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 10/326 (3%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 954 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL- 1012
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1013 GAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFP 1072
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSV 506
+ +FY+ ++ DS +V K E + + PY F ++ GRE S +N+ E
Sbjct: 1073 SRHFYQGRLTDSESVVKLPDEA-YYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQF 1131
Query: 507 VMKILLNLYK-AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
V+++ NL K + +K S+GI++PY Q+ +Q + G + + ++D FQ
Sbjct: 1132 VLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQ 1191
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + + W L+
Sbjct: 1192 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNAGALMQSED-WALLI 1249
Query: 626 HDANARQCFFNADDDKDLGKAILAVK 651
DA AR+CF + D + K LA+K
Sbjct: 1250 ADAKARKCFMDLD---TIPKDFLAMK 1272
>gi|302141933|emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 7/308 (2%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+L SF + +F + +SS L S + +VIDEAAQ E PL L G
Sbjct: 745 NLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL-GAARC 803
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY
Sbjct: 804 VLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFY 863
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKIL 511
+ ++ DS +V E + P+ PY F ++ GRE S +N+ E + +++
Sbjct: 864 QGRLTDSESVTNLPDEA-YYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLY 922
Query: 512 LNLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+L K K+S+GI++PY Q+ +Q + + G + + ++D FQG E D
Sbjct: 923 EHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERD 982
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+II+S VR+++ G +GF+++ +R+NVALTRAR LW++GNA L + W AL+ DA A
Sbjct: 983 VIIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALMQSDD-WAALISDARA 1040
Query: 631 RQCFFNAD 638
R C+ + D
Sbjct: 1041 RSCYLDMD 1048
>gi|16924040|gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family protein [Oryza sativa]
gi|125573854|gb|EAZ15138.1| hypothetical protein OsJ_30554 [Oryza sativa Japonica Group]
Length = 1468
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 10/326 (3%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 954 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL- 1012
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1013 GAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFP 1072
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSV 506
+ +FY+ ++ DS +V K E + + PY F ++ GRE S +N+ E
Sbjct: 1073 SRHFYQGRLTDSESVVKLPDEA-YYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQF 1131
Query: 507 VMKILLNLYK-AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
V+++ NL K + +K S+GI++PY Q+ +Q + G + + ++D FQ
Sbjct: 1132 VLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQ 1191
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + + W L+
Sbjct: 1192 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNAGALMQSED-WALLI 1249
Query: 626 HDANARQCFFNADDDKDLGKAILAVK 651
DA AR+CF + D + K LA+K
Sbjct: 1250 ADAKARKCFMDLD---TIPKDFLAMK 1272
>gi|225459354|ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 7/308 (2%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+L SF + +F + +SS L S + +VIDEAAQ E PL L G
Sbjct: 961 NLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL-GAARC 1019
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY
Sbjct: 1020 VLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFY 1079
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKIL 511
+ ++ DS +V E + P+ PY F ++ GRE S +N+ E + +++
Sbjct: 1080 QGRLTDSESVTNLPDEA-YYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLY 1138
Query: 512 LNLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+L K K+S+GI++PY Q+ +Q + + G + + ++D FQG E D
Sbjct: 1139 EHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERD 1198
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+II+S VR+++ G +GF+++ +R+NVALTRAR LW++GNA L + W AL+ DA A
Sbjct: 1199 VIIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALMQSDD-WAALISDARA 1256
Query: 631 RQCFFNAD 638
R C+ + D
Sbjct: 1257 RSCYLDMD 1264
>gi|414868096|tpg|DAA46653.1| TPA: hypothetical protein ZEAMMB73_170269 [Zea mays]
Length = 809
Score = 199 bits (505), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 7/313 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E PL L
Sbjct: 402 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLAL- 460
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 461 GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFP 520
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI--EHSCRNMVEVSV 506
+ YFY+ ++ DS +V K E + + PY F ++ GRE S +N+ E
Sbjct: 521 SKYFYQGRLTDSESVVKLPDEA-YYRDALMAPYIFYDMSHGRESHRGGSSSYQNIHEAQF 579
Query: 507 VMKILLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+++ +L K + +K+S+GI++PY Q+ +Q + G + + ++D FQ
Sbjct: 580 ALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYINTVDAFQ 639
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + + W +L+
Sbjct: 640 GQERDIIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED-WASLI 697
Query: 626 HDANARQCFFNAD 638
DA AR+CF + D
Sbjct: 698 ADAKARKCFMDLD 710
>gi|449529064|ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
helicase C29A10.10c-like [Cucumis sativus]
Length = 1363
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 171/311 (54%), Gaps = 7/311 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+D L SF + +F + +SS L S + +VIDEAAQ E P L
Sbjct: 944 EDARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPXSL- 1002
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
G VL GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP
Sbjct: 1003 GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFP 1062
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSV 506
+ YFY+ ++ DS +V E + P+ PY+F ++ GRE S +N+ E
Sbjct: 1063 SRYFYQGRLTDSESVANLPDET-YYKDPLLRPYTFFDITHGRESHRGGSVSYQNIHEAQF 1121
Query: 507 VMKILLNLYKAWIDSK-EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+++ +L K S K+S+GI++PY Q+ +Q + + G + + ++D FQ
Sbjct: 1122 CLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQ 1181
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E D+II+S VR++N G +GF+++ +R+NVALTRAR LW++GNA L + W AL+
Sbjct: 1182 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSDD-WAALI 1239
Query: 626 HDANARQCFFN 636
DA AR C+ +
Sbjct: 1240 TDAKARNCYMD 1250
>gi|414884578|tpg|DAA60592.1| TPA: hypothetical protein ZEAMMB73_434278 [Zea mays]
Length = 723
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 216/417 (51%), Gaps = 57/417 (13%)
Query: 50 TIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDC 109
+++LIWG GKTKT+S LL +L RT+ C PTN A+ E+A+RV+ +++ES
Sbjct: 191 SVRLIWGL-RDGKTKTISALLWSMLIENQRTVTCAPTNTAVAEVASRVLGVIEESGGGGA 249
Query: 110 RDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASMVDFLD 169
FF GD++L GN +R+ VD +E I+LD RV+RL C P+TGW+ +SM+ +
Sbjct: 250 ATKCFF--GDVVLFGNEDRMAVDRKLENIFLDTRVRRLRQCLMPITGWTKSLSSMIALQE 307
Query: 170 NCVSLYHTY--------------------------IDNESMKQSEDINGDIIKEKECGKE 203
+ + Y Y + K+ ++I D+++ ++ +E
Sbjct: 308 DPMVPYERYDEAIQGCVLDLVSEEIKLRNVIVVCSLRTMDDKKVKEIQKDLLEVQKKARE 367
Query: 204 ADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSF 263
+ + F + + +K +A LR+C+ F +P+ ++NF MA ++ LLD+F
Sbjct: 368 VEREKIS---FETYFQSNYKKLAKDLRTCVETFVDDLPRSATSEENFCCMAEVLLLLDAF 424
Query: 264 ETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNL 323
L + SE +E+L + L K +++ L + S C LRKL + L
Sbjct: 425 GVL-----VQSEPVEQL------QALFKRHSDVRFRLREAISSC---LRKLWLLSSNFKL 470
Query: 324 PSAVEKDLLEDLLKSFCLKRASLFLSTASSSY-MLHSVAMEPLNFLVIDEAAQLKESEST 382
P + + DL F L+ A + L TASSSY +L+ +PL V+DEAAQLKE ES
Sbjct: 471 PEMYDSRTI-DL--EFLLQNAKIVLCTASSSYRLLYMQKAQPLEVPVVDEAAQLKECESL 527
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF-------ERLSYLGYSKH 432
IPLQL G++HAVL DE LPA+V+SK + G +L E+L YS H
Sbjct: 528 IPLQLPGVRHAVLIDDEYLLPALVKSKEGDPPGSGVALQGPGPAIEEKLGKQVYSMH 584
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY--VNSAGFAVKVMSIDGFQGGEEDL 571
L A + SKE G AI+EKLG + ++ F+VKV ++DGFQG EED+
Sbjct: 546 LLPALVKSKEGDPPGSGVALQGPGPAIEEKLGKQVYSMHDGSFSVKVRTVDGFQGAEEDV 605
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHC-----LWIL--------GNARTLTRKK 618
II STVRSN G IGFL+++ R NVALTRA +W + G ++
Sbjct: 606 IIFSTVRSNTAGKIGFLADTNRTNVALTRANALDDDVFVWYVLQTLPVDPGQREDAGERQ 665
Query: 619 SVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
+ A R CF +A DD+DL AI+ ELD ++ LL
Sbjct: 666 NDMAADRGRRKERGCFLDAKDDQDLACAIIKASIELDGVENLLK 709
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 196 bits (499), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 178/308 (57%), Gaps = 18/308 (5%)
Query: 336 LKSFCLKRASLFLSTASSS---YMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGI 390
L+ L+ A + ST S S YM + P +F +VIDEA Q E S IPL+ +
Sbjct: 1643 LRMQILQDADVVCSTLSGSGHDYM----SQLPFDFETVVIDEACQCVEPASLIPLRYNAT 1698
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYRMHPSISCFPN 449
+ +L GD QLP V S+ +++A + +SLF R+ HLLSIQYRMHPSIS FP+
Sbjct: 1699 Q-CILVGDPMQLPPTVLSQTASQAGYDQSLFVRMQRNAPDVAHLLSIQYRMHPSISTFPS 1757
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVM 508
FY++K+ D + ++ + G ++ PY+F + G REE HS N E S+ +
Sbjct: 1758 KAFYDSKLLDGPEMESKAVQPWHQSGSLFPPYAFYHPVGAREERGAHHSLMNRTEASLAV 1817
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGE 568
I + + +GI++ Y+AQV I+ +L +K+ S A+ V ++DGFQG E
Sbjct: 1818 SIYWRIANDYPHIDFAYRVGIITGYAAQVGEIRRQLRAKFPASTVAAIDVNTVDGFQGQE 1877
Query: 569 EDLIIISTVR-----SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
+D+II+S VR +N+GG IGFL + +R+NVALTRA+ ++I+GN R + + W+A
Sbjct: 1878 KDIIILSCVRGGRDDNNSGGGIGFLKDIRRMNVALTRAKSSMFIIGN-RAVLSQDPTWKA 1936
Query: 624 LVHDANAR 631
LV DA R
Sbjct: 1937 LVEDAAGR 1944
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 31/142 (21%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N+ Q +A++S L LI GPPGTGKT T+ L+ + + +
Sbjct: 1430 VNEPQGRAIISALA------TPGFSLIQGPPGTGKTSTIVGLIGAFIASRPKVGDPAGGG 1483
Query: 81 ---------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV 131
L+C P+N A+ E+A R +KE V R + L P ++ +G + KV
Sbjct: 1484 KQPSITRKILLCAPSNAAVDEVAKR----LKEGV-RGAQGELIIP--KLVRIGADS--KV 1534
Query: 132 DSGVEEIYLDYRVKRLADCFAP 153
+ V++I++D V ++ P
Sbjct: 1535 NLAVKDIFIDELVAAMSKDAEP 1556
>gi|184160102|gb|ACC68168.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1054
Score = 196 bits (498), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 733 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 791
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LL++QYRMHP I FP+ YFY+
Sbjct: 792 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 851
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
+++DS ++ + ++ + P+ PY F N+ GRE S N+ E + + +
Sbjct: 852 GRLKDSESI-SSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYM 910
Query: 513 NLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L K + K+S+G+++PY Q+ ++ + G+ + + ++D FQG E D+
Sbjct: 911 HLQKTLKLLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDV 970
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++ G +GF+S+ +R+NVALTRAR LW++GNA L + + W AL+ DA R
Sbjct: 971 IIMSCVRASGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALITDARGR 1028
Query: 632 QCFFNAD 638
CF D
Sbjct: 1029 NCFMEMD 1035
>gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|3176714|gb|AAD12029.1| putative DNA2-NAM7 helicase family protein [Arabidopsis thaliana]
gi|330251755|gb|AEC06849.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1090
Score = 196 bits (497), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 169/307 (55%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 745 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 803
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LL++QYRMHP I FP+ YFY+
Sbjct: 804 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 863
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
+++DS ++ + ++ + P+ PY F N+ GRE S N+ E + + +
Sbjct: 864 GRLKDSESI-SSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYM 922
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L K K+S+G+++PY Q+ ++ + G+ + + ++D FQG E D+
Sbjct: 923 HLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDV 982
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++ G +GF+S+ +R+NVALTRAR LW++GNA L + + W AL+ DA R
Sbjct: 983 IIMSCVRASGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALISDARGR 1040
Query: 632 QCFFNAD 638
CF D
Sbjct: 1041 NCFMEMD 1047
>gi|213408549|ref|XP_002175045.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212003092|gb|EEB08752.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1974
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 184/316 (58%), Gaps = 9/316 (2%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEP-LNF--LVIDEAAQLKESESTIPLQ 386
D+ + ++S LK A + ST S+S H + ++ ++F ++IDEAAQ E + IPL+
Sbjct: 1478 DIAKKQIQSQLLKDAEIICSTLSASG--HDILLKSGISFPSVIIDEAAQAVELSALIPLK 1535
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSKHLLSIQYRMHPSIS 445
G + ++ GD QLP V SK +++ + SL+ R+ S LLSIQYRMHP IS
Sbjct: 1536 Y-GCERCIMVGDPNQLPPTVLSKTASQNGYSESLYVRMHKQNPNSSFLLSIQYRMHPEIS 1594
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVS 505
FP+SYFY +++ D ++K + + + H P +G Y F +V I S N E S
Sbjct: 1595 RFPSSYFYGSRLLDGPDMQKLT-ARPWHHDPTFGIYRFFDVRTRESSSITKSVYNPEEAS 1653
Query: 506 VVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
V+ + L + +I+ + +GIV+PY Q+ ++ + +Y V ++DGFQ
Sbjct: 1654 FVLTLYDKLVQDYINVDMEGKVGIVTPYRRQLQELRMQFERRYGPLIFKRVDFNTVDGFQ 1713
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E+D+I+ S VR + GG IGFLS+++R+NVALTRA+ L+I+GN TLT+ K +W AL+
Sbjct: 1714 GQEKDIILFSCVRGDMGGGIGFLSDTRRLNVALTRAKSSLYIIGNVGTLTKDK-MWSALI 1772
Query: 626 HDANARQCFFNADDDK 641
DA R C + D+
Sbjct: 1773 TDAQTRSCLVTSSIDQ 1788
>gi|302811594|ref|XP_002987486.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
gi|300144892|gb|EFJ11573.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
Length = 2281
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 205/390 (52%), Gaps = 28/390 (7%)
Query: 261 DSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
DS + L+ + V+E++ E+L + S++ L +++++ + +RK + +F
Sbjct: 1656 DSAQELVSKLEQVTEKINEILRRKSEGVHDDSLMAKLTQLEQQKNDLNLDIRKSRKTFE- 1714
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLST-ASSSYMLHSVAMEP--------LNFLVID 371
+ K+ L K+ ++ A + L+T +++ M+ + +VID
Sbjct: 1715 ------ISKERRRKL-KNQNIRDADIVLTTLGGCGGDVYAACMDTSEKDTELFFDAVVID 1767
Query: 372 EAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
EA Q E S IPLQ G H VL GD QLPA V S+ ++ C+ RS+FER GY
Sbjct: 1768 EAGQALEPASLIPLQFLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFERFQKNGY 1827
Query: 430 SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG 489
+LS QYRMHP I FP+SYFY N++ D ++V F + PY+F +V G
Sbjct: 1828 PVTMLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRSSFHKDRFFRPYTFFDVIDG 1887
Query: 490 REEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ---EKLGS 546
+E S N+ EV V +K+ + + IG+++PY Q+ ++ ++ G
Sbjct: 1888 QERAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKRAFQRFGE 1947
Query: 547 KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHCL 605
K + F +IDGFQG E D++I+STVR++ IGF+++ +R+NVALTR R L
Sbjct: 1948 KISSILEFN----TIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSL 2003
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFF 635
WI+G+AR L R W AL+ DA +R +
Sbjct: 2004 WIIGSARAL-RSNRAWAALLEDATSRGAVY 2032
Score = 40.8 bits (94), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 13 EGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI 72
E +W + L N+SQ A+ + L R D I LI GPPGTGKT+T+ ++
Sbjct: 1486 EKLWRK-----LKEDYNESQLSAIKASLGDSRKDQH-EISLIQGPPGTGKTRTIVAIVSA 1539
Query: 73 LLQMK 77
LL +
Sbjct: 1540 LLHSR 1544
>gi|356522392|ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
Length = 1388
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 172/307 (56%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 949 LEASFANEAEVVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSL-GAARCV 1007
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY+
Sbjct: 1008 LVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQ 1067
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V K E + P+ PY F ++ GRE S +N+ E +++
Sbjct: 1068 GRLTDSESVAKLPDEP-YYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYE 1126
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
++ K K+++GI++PY Q+ +Q + + G + + ++D FQG E D+
Sbjct: 1127 HVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDV 1186
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR+++ G +GF+++ +R+NVALTRAR LW++GNA L + + W AL++DA +R
Sbjct: 1187 IIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALLQSED-WAALINDAKSR 1244
Query: 632 QCFFNAD 638
C+ + D
Sbjct: 1245 NCYMDMD 1251
>gi|356558781|ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 1328
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 172/307 (56%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 915 LEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSL-GAARCV 973
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY+
Sbjct: 974 LVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQ 1033
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V K E + P+ PY F ++ GRE S +N+ E +++
Sbjct: 1034 GRLTDSESVAKLPDEP-YYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYE 1092
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
++ K K+++GI++PY Q+ +Q + + G + + ++D FQG E D+
Sbjct: 1093 HVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDV 1152
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR+++ G +GF+++ +R+NVALTRAR LW++GNA L + + W AL++DA +R
Sbjct: 1153 IIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALLQSED-WAALINDAKSR 1210
Query: 632 QCFFNAD 638
C+ + D
Sbjct: 1211 NCYMDMD 1217
>gi|357513937|ref|XP_003627257.1| Helicase sen1 [Medicago truncatula]
gi|355521279|gb|AET01733.1| Helicase sen1 [Medicago truncatula]
Length = 1516
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 170/307 (55%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 1034 LEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSL-GAARCV 1092
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ YFY+
Sbjct: 1093 LVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQ 1152
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V K E + P+ PY F ++ GRE S +N+ E +++
Sbjct: 1153 GRLSDSESVIKLPDEA-YYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYE 1211
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
++ K K+S+GI++PY Q+ +Q + + G + + ++D FQG E D+
Sbjct: 1212 HIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERDV 1271
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++ G +GF+++ +R+NVALTRAR LW++GNA L + + W AL+ DA +R
Sbjct: 1272 IIMSCVRASTHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSED-WAALIADARSR 1329
Query: 632 QCFFNAD 638
C+ + D
Sbjct: 1330 NCYMDMD 1336
>gi|255545656|ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223546974|gb|EEF48471.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 1352
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 170/305 (55%), Gaps = 7/305 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 944 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLAL-GAPRCV 1002
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LLS+QYRMHP I FP+ +FY+
Sbjct: 1003 LVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRHFYQ 1062
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
+++ DS +V E + P+ PY F +V GRE S +N+ E ++
Sbjct: 1063 SRLTDSESVVNLPDEM-YYKDPLLRPYLFYDVTYGRESHRGGSVSFQNVHEAQFCFQLYE 1121
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L K ++S+GI++PY Q+ +Q + + + G + + ++D FQG E D+
Sbjct: 1122 HLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFAAILKSEEGKDIYINTVDAFQGQERDV 1181
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++N S+GF+++ +R+NVALTRAR LW++GNA +L K W AL+ DA AR
Sbjct: 1182 IIMSCVRASN-HSVGFVADIRRMNVALTRARRALWVMGNANSLV-KSDDWAALIDDAKAR 1239
Query: 632 QCFFN 636
C+ +
Sbjct: 1240 NCYMD 1244
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 191/343 (55%), Gaps = 19/343 (5%)
Query: 329 KDLLEDLLKSFC---LKRASLFLSTASSSYMLH-SVAMEPLNFLVIDEAAQLKESESTIP 384
K + ++ FC L A + ST SSS S ++ + L++DEAAQ E + IP
Sbjct: 1013 KKMYKEYYNQFCEKLLNDAEIICSTLSSSGSDKLSKYLDQIELLIVDEAAQCTEPSNIIP 1072
Query: 385 LQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSI 444
L+L GI+ +L GD QLPA S VSN+ + RSLFER+ + + L IQYRMH I
Sbjct: 1073 LRL-GIQKMILIGDPKQLPATTFSPVSNQTLYNRSLFERILDNNFQPYFLDIQYRMHSEI 1131
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEV 504
FP+ YFY+NK++D + R F + F+++ G+E+ S N E
Sbjct: 1132 RMFPSEYFYQNKLKDHESTNNRDLPTNFFKNRVL----FLDILDGQEQKDGTSNINEQEA 1187
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF---AVKVMSI 561
S I++N K + +IG++ Y +QV I+ L KY + + F + + ++
Sbjct: 1188 S----IIVNSIKCIKEEFPTQTIGVICAYKSQVRYIKTLLKQKYSDESLFDHSTISINTV 1243
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D FQG E+D+I+ S VRS+ G IGFL++ +R+NVALTRA++ L+ILGNA TL+ K +W
Sbjct: 1244 DSFQGQEKDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGNAITLS-KSDLW 1302
Query: 622 EALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPE 664
++++ + R + N + + + IL K E E ++ L+P+
Sbjct: 1303 KSMLKNIQKRGLYRNLESQQFQFQQIL--KDEWSEQNKTLSPK 1343
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 53 LIWGPPGTGKTKTVSMLL-----VILLQMKF---RTLVCTPTNVAIKELAARVVK 99
L+ GPPGTGKT T+ LL + L KF + L+C P+N AI E+ R+++
Sbjct: 840 LLQGPPGTGKTHTLIGLLSGVYEYMKLTNKFPRKKILICAPSNAAIDEIILRILQ 894
>gi|302796659|ref|XP_002980091.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
gi|300152318|gb|EFJ18961.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
Length = 2265
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 205/390 (52%), Gaps = 28/390 (7%)
Query: 261 DSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
DS + L+ + V+E++ E+L + S++ L +++++ + +RK + +F
Sbjct: 1659 DSAQELVSKLEQVTEKINEILRRKSEGVHDDSLMAKLTQLEQQKNDLNLDIRKSRKTFE- 1717
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLST-ASSSYMLHSVAMEP--------LNFLVID 371
+ K+ L K+ ++ A + L+T +++ M+ + +VID
Sbjct: 1718 ------ISKERRRKL-KNQNIRDADIVLTTLGGCGGDVYAACMDTSEKDTELFFDAVVID 1770
Query: 372 EAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
EA Q E S IPLQ G H VL GD QLPA V S+ ++ C+ RS+FER GY
Sbjct: 1771 EAGQALEPASLIPLQFLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFERFQKNGY 1830
Query: 430 SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG 489
+LS QYRMHP I FP+SYFY N++ D ++V F + + PY+F +V G
Sbjct: 1831 PVTMLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRASFHNDRFFRPYTFFDVIDG 1890
Query: 490 REEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ---EKLGS 546
+E S N+ EV V +K+ + + IG+++PY Q+ ++ ++ G
Sbjct: 1891 QERAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKRAFQRFGE 1950
Query: 547 KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHCL 605
K + F +IDGFQG E D++I+STVR++ IGF+++ +R+NVALTR R L
Sbjct: 1951 KISSILEFN----TIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSL 2006
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFF 635
WI+G+A L R W AL+ DA +R +
Sbjct: 2007 WIIGSAMAL-RSNRAWAALLEDATSRGAVY 2035
>gi|184160087|gb|ACC68154.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1071
Score = 193 bits (490), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 168/307 (54%), Gaps = 7/307 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 733 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 791
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LL++QYRMHP I FP+ YFY+
Sbjct: 792 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 851
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
+++DS ++ + ++ + P+ PY F N+ GRE S N+ E + + +
Sbjct: 852 GRLKDSESI-SSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYM 910
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L K K+S+G+++PY Q+ ++ + G+ + + ++D FQG E D+
Sbjct: 911 HLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDV 970
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++ G +GF+S+ +R+NVALTRAR LW++GNA L + + W AL+ DA R
Sbjct: 971 IIMSCVRASGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALITDARGR 1028
Query: 632 QCFFNAD 638
C D
Sbjct: 1029 NCVMEMD 1035
>gi|297723429|ref|NP_001174078.1| Os04g0599650 [Oryza sativa Japonica Group]
gi|255675747|dbj|BAH92806.1| Os04g0599650 [Oryza sativa Japonica Group]
Length = 1774
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 157/264 (59%), Gaps = 20/264 (7%)
Query: 777 YTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADNDNNSGSDLSGAAFDSRNYAEN 836
YT E+++ C+ EG LEVP W A +++R++ + + D D D EN
Sbjct: 2 YTDEYLDKCRRVKTEGKLEVPVIWDAEHDIIRYRKVLEVDAQEDHD----HVDISYAMEN 57
Query: 837 SNVSESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGT 896
S VSES LMKFY LSS V HLL+ G E+D+PFE+TDE+ +I P ++FILGRSGT
Sbjct: 58 SKVSESFLLMKFYSLSSGVAKHLLTATDGSEIDIPFELTDEEQAIIRFPLTSFILGRSGT 117
Query: 897 GKTTVLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTV 956
GKTTVLT KL Q + + ++ G+N + S A++ L E E ++Q+ +TV
Sbjct: 118 GKTTVLTMKLIQ---IWQQSLIASRGLNLD-----ERNSTAQKDLSEVE-TFVKQVLITV 168
Query: 957 SPKLCFAIKQHISQMKSSAFGGKFVAESSLI-----DIDDEAEFKDIPNSFADIPAESYP 1011
SPKL AI+ I ++ + +G V++ + I +DD +F DIP+SF +P E YP
Sbjct: 169 SPKLGSAIRNQICKL--TRYGSGDVSDQASILQMPDMVDDLEDFTDIPDSFIGLPCEHYP 226
Query: 1012 LVITFHKFLMMLDGTLGSSYFDRF 1035
L ITF KFLMMLDGT +S+F F
Sbjct: 227 LTITFRKFLMMLDGTCKTSFFGTF 250
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 176/304 (57%), Gaps = 17/304 (5%)
Query: 338 SFC---LKRASLFLSTASSSYMLH-SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
FC L A + ST SSS S ++ + L++DEAAQ E + IPL+L GIK
Sbjct: 1050 QFCEKLLNDAEIIFSTLSSSGSDKLSKYLDQIELLIVDEAAQCTEPSNIIPLRL-GIKKM 1108
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
+L GD QLPA S VS++ + RSLFER+ + L IQYRMH I FP+ YFY
Sbjct: 1109 ILIGDPKQLPATTFSPVSHQTLYNRSLFERILDNNVKPYFLDIQYRMHSEIRMFPSEYFY 1168
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLN 513
+NK++D + R+ +F + F+++ G+E+ S N E V+++++ +
Sbjct: 1169 QNKLKDHESTNTRNLPSKFFKNRVL----FLDILDGQEQKDGTSNINEQEAIVIVQLIKS 1224
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF---AVKVMSIDGFQGGEED 570
+ + + +IG++ Y +QV I+ L K+ + F + + ++D FQG EED
Sbjct: 1225 IKEEFPTQ----TIGVICAYKSQVRYIKTLLKQKFQDENIFDENTISINTVDSFQGQEED 1280
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+I+ S VRS+ G IGFL++ +R+NVALTRA++ L+ILGNA TL+ K ++W +++ +
Sbjct: 1281 IILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGNAITLS-KSNLWRSMLKNIQQ 1339
Query: 631 RQCF 634
R+ +
Sbjct: 1340 RKLY 1343
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL-----VI 72
++F + N SQA ++ R++ K I L+ GPPGTGKT + LL +
Sbjct: 838 DSFFQLVDEKYNKSQANSI----REIILKEKG-ICLVQGPPGTGKTHLLLGLLSGAYEYM 892
Query: 73 LLQMKF---RTLVCTPTNVAIKELAARVVK 99
L KF + L+CTP+N AI E+ R+V+
Sbjct: 893 KLTNKFPKKKILICTPSNAAIDEIILRIVQ 922
>gi|242034805|ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
gi|241918651|gb|EER91795.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
Length = 372
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 159/275 (57%), Gaps = 7/275 (2%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+VIDEAAQ E PL L G VL GD QLPA V SK + + RSLFER
Sbjct: 1 MVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQ 59
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
G LLS+QYRMHP I FP+ YFY+ ++ DS +V + E + + PY F ++
Sbjct: 60 AGCPTILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVQLPDEA-YYRDALMAPYIFYDM 118
Query: 487 FGGREEFI--EHSCRNMVEVSVVMKILLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEK 543
GRE S +N+ E +++ +L K + +K+S+GI++PY Q+ +Q +
Sbjct: 119 SHGRESHRGGSSSYQNIHEAQFALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQRE 178
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
G + + ++D FQG E D+II+S VR++N G +GF+++ +R+NVALTRAR
Sbjct: 179 FKDVMNTEEGKDIYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 237
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
LW++GNA L + + W +L+ DA AR+CF + D
Sbjct: 238 ALWVVGNANALMQSED-WASLIADAKARKCFMDLD 271
>gi|253757764|ref|XP_002488861.1| hypothetical protein SORBIDRAFT_3241s002010 [Sorghum bicolor]
gi|241947324|gb|EES20469.1| hypothetical protein SORBIDRAFT_3241s002010 [Sorghum bicolor]
Length = 403
Score = 189 bits (481), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 199/397 (50%), Gaps = 57/397 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ AV C+ M ++ ++I+L+WGPPGTGKTKT+S +L +L RTL C PTN
Sbjct: 33 LNNSQLNAVADCVATMD-NNSSSIKLLWGPPGTGKTKTISSILWAMLIKGRRTLACAPTN 91
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSG--VEEIYLDYRVK 145
A+ E+ AR+ KL+ ES D F L DI+L GN + LK+D G + ++YL+ R +
Sbjct: 92 TAVLEIVARIAKLIVES-----SDGSVF-LNDIVLFGNKKNLKIDDGNYLSKVYLNSRAE 145
Query: 146 RLADCFAPL--TGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKE 203
RL CF TGW HC S +D L N V++Y ++NE
Sbjct: 146 RLLPCFMSKSNTGWRHCLCSFIDLLVNSVTMYQ--LNNEG-------------------- 183
Query: 204 ADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSF 263
K F ++++ + ++ LRS + P+ +F M ++ L+
Sbjct: 184 --------KTFKQYLKHDYNKLSRNLRSYLTMLYNDHPRNLETGQSFQCMLEVLELIKIL 235
Query: 264 ETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECH---------FVLRKL 314
L+ N ELL +++E ++ + + L R + C+ +++L
Sbjct: 236 HALINVSNGGDLWSNELLESTIEEEVNPELWPSQ-LASIRTNSCNKSKFVAARSLCVQEL 294
Query: 315 QSSFNELNLPSAVE-KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEA 373
L LP +D ++ + L R + T SS+ L+ V M PL L+IDEA
Sbjct: 295 IYLRMNLELPDCNNTRD-----VQLYLLSRTRCIICTVCSSFRLYDVPMIPLELLIIDEA 349
Query: 374 AQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 410
AQLKE E+ +PLQL GI+H V GDE QLPA+V+ V
Sbjct: 350 AQLKECETLVPLQLPGIRHVVFIGDEYQLPALVKKTV 386
>gi|298715587|emb|CBJ28140.1| hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus]
Length = 1244
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 174/315 (55%), Gaps = 13/315 (4%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
L+ L A L ST +SS + P LV+DEAAQ E + IPL+L G +H VL
Sbjct: 459 LEVTLLDEAHLVFSTLNSSGLPCMDQTSPFEVLVVDEAAQSVEVSTIIPLRL-GCRHCVL 517
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA V S+ + + RSLF+RL + +L +QYRMHP+IS FP++ FY+
Sbjct: 518 VGDPNQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISAFPSATFYDG 577
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLN 513
K++D V +Y + F P++ P+ F ++ G + S N +E + + + +
Sbjct: 578 KLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVT 637
Query: 514 LYKAWIDSKEKLS---------IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
L +++ E+ S +G++SPY+ Q+ ++EK V++ ++D F
Sbjct: 638 LKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAF 697
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E+D+II+STVR+ IGFL++ +R+NVALTRARH L+++G+A L+ W+ L
Sbjct: 698 QGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPK-WKEL 756
Query: 625 VHDANARQCFFNADD 639
A +R+ D
Sbjct: 757 ADLAESREGLVKVTD 771
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 196/350 (56%), Gaps = 17/350 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E +VIDEAAQ E
Sbjct: 1504 NHSAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1562
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 1563 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 1621
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFI 494
RMHP IS FP+ FY+ K++D + +RK+ + HG + GPY F +V G
Sbjct: 1622 RMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPW-----HGSELLGPYRFFDVQGMHSSAA 1676
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E++V M++ L + + IGI++PY Q+ ++ + +KY +S
Sbjct: 1677 KGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIF 1736
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
AV+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++
Sbjct: 1737 TAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQS 1795
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
L R + W AL+HDA RQ + D K L K +++ E++ ++ + P
Sbjct: 1796 LVRGE-FWRALIHDARDRQLYTEGDILKILQKPQISLDMEMNNVEMVDAP 1844
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 36/113 (31%)
Query: 20 FGP-SLSSTL-----NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL 73
+GP SL S L N +QA+A+ S + D+ A LI GPPG+GKTKT+ ++ +
Sbjct: 1287 YGPESLKSILATYDLNLAQAKAIKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGAI 1340
Query: 74 L----------QMKFRT--------------LVCTPTNVAIKELAARVVKLVK 102
L Q K T LVC P+N A+ EL R + VK
Sbjct: 1341 LTPILAERRVSQPKISTDSVQANKSATSKKLLVCAPSNAAVDELVMRFKEGVK 1393
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 199/362 (54%), Gaps = 29/362 (8%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASS---SYM 356
+H++ +EC +R+L+ +A+ + E +L + + LS A S S +
Sbjct: 1735 MHQQLTECSGKIRRLRDEV------TAIRAKMTETILSKASI--IACTLSKAGSGDFSEL 1786
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
H + L+IDEAAQ E + +P++ + VL GD QLPA V+S V+ +A +
Sbjct: 1787 KHG-----FDALIIDEAAQAVELSTLVPIR-ERVARVVLVGDPKQLPATVKSVVAAKARY 1840
Query: 417 GRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE---KRFL 473
RSLFER++ G + +L +QYRMHP + FP+ FY + D +V +R + +
Sbjct: 1841 DRSLFERIAESGVAPSMLRVQYRMHPFLRDFPSKRFYGGMLTDGPSVMERVQKVCPGVYA 1900
Query: 474 HGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWID-SKEKLSIGIVSP 532
H + P+ +V REE + S N VE + + + N+++ D K K S+G VSP
Sbjct: 1901 HT-SFQPFLLYDVENSREEDMNGSKYNRVEAAFCISLCQNMFETIADVRKNKWSVGFVSP 1959
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y QV +++++ + + +++V ++DGFQG E+D+II S VR++ G IGFL + +
Sbjct: 1960 YKEQVRVLRQEITKSGIPTT-VSIEVNTVDGFQGREKDVIIFSCVRASKRGGIGFLRDIR 2018
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKK 652
R+NVA+TRAR CL+++GN TL R ++ W ALV A R+ + G+A AV K
Sbjct: 2019 RLNVAITRARFCLYVVGNVNTLVRDET-WAALVKSARDRKLII-----RTKGEAFPAVAK 2072
Query: 653 EL 654
L
Sbjct: 2073 RL 2074
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 196/350 (56%), Gaps = 17/350 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E ++IDEAAQ E
Sbjct: 1506 NHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVIIDEAAQSIEL 1564
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 1565 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 1623
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFI 494
RMHP IS FP+ FY+ K++D + +RK+ + HG + GPY F +V G
Sbjct: 1624 RMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPW-----HGSELLGPYRFFDVQGMHSSAA 1678
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E++V M++ L + + IGI++PY Q+ ++ + +KY +S
Sbjct: 1679 KGHSLVNIAELTVAMRLYERLVADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIF 1738
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
AV+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++
Sbjct: 1739 TAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQS 1797
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
L R + W AL+HDA RQ + D + L K +++ EL+ ++ + P
Sbjct: 1798 LVRGE-FWRALIHDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAP 1846
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV-----SMLLVILLQMKF---- 78
LN +QA+A+ S + D+ A LI GPPG+GKTKT+ ++L IL + K
Sbjct: 1303 LNPAQAKAIKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPK 1356
Query: 79 ---------------RTLVCTPTNVAIKELAARVVKLVK 102
+ LVC P+N A+ EL R + VK
Sbjct: 1357 IASDSAQASKSAPSKKLLVCAPSNAAVDELVMRFKEGVK 1395
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 193/347 (55%), Gaps = 11/347 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E ++IDEAAQ E
Sbjct: 1521 NQAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVIIDEAAQSIEL 1579
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 1580 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 1638
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE-H 496
RMHP IS FP+ FY+ K++D + K+ HG + GPY F +V G + H
Sbjct: 1639 RMHPEISKFPSQAFYDGKLQDGPAMG--PLRKKPWHGSELLGPYRFFDVQGMHSSATKGH 1696
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ E++V M++ L + + + IGI++PY Q+ ++ + +KY +S V
Sbjct: 1697 SLVNIAELTVAMRLYERLLADYRNYEFAGKIGIITPYKGQLRELKSRFAAKYGSSIFTTV 1756
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++L R
Sbjct: 1757 EFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVR 1815
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
+ W AL+HDA RQ + D + L K +++ EL+ ++ + P
Sbjct: 1816 GE-FWRALIHDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAP 1861
Score = 43.1 bits (100), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV-----SMLLVILLQMKFRT-- 80
LN +QA+A+ S + D+ A LI GPPG+GKTKT+ ++L IL + +
Sbjct: 1318 LNPAQAKAIKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPK 1371
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVK 102
LVC P+N A+ EL R + VK
Sbjct: 1372 IISDSAQASKSASSKKLLVCAPSNAAVDELVMRFKEGVK 1410
>gi|328873818|gb|EGG22184.1| putative splicing endonuclease [Dictyostelium fasciculatum]
Length = 1947
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 172/291 (59%), Gaps = 12/291 (4%)
Query: 338 SFCLKRASLFLSTASSS-YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 396
S L RAS+ LST S S Y S A++ + ++IDEAAQ E + IPL+ +K +L
Sbjct: 1588 SNMLNRASIILSTLSGSGYESLSAAVKQFDVVIIDEAAQAVELSTLIPLK-HNVKKCILV 1646
Query: 397 GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENK 456
GD QLPA V S+++ + +SLF+RLS G +L++QYRMHP+IS FP+ +FY +
Sbjct: 1647 GDPNQLPATVISRITTNFQYEQSLFQRLSQCGIPMQVLNVQYRMHPTISRFPSKHFYHGQ 1706
Query: 457 IRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE--HSCRNMVEVSVVMKILLNL 514
I+D V ++ +GP+ F ++ E+ + HS RN+ E + I+ L
Sbjct: 1707 IKDGHNVIALNH--NIYKDARFGPFIFYDITDSVEDSNQSSHSLRNVHEAKLANLIISQL 1764
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
+ EKLSIG+++PY Q + + +L + NS V+V ++DGFQG E+D+II
Sbjct: 1765 LVHFSKDCEKLSIGVITPYKQQQIELSRRLS--HFNS---MVEVNTVDGFQGREKDIIIF 1819
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
S VR++ GGSIGFLS+ +R+NV LTRA+ + ++G+ L S W L+
Sbjct: 1820 SCVRAHKGGSIGFLSDVRRMNVGLTRAKLSMIVIGHTNLLML-NSDWGELI 1869
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 23 SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-------- 74
+L +LNDSQ +A+ + L + L+ GPPGTGKTKT+ LL +LL
Sbjct: 1368 ALKESLNDSQIEAIHASLT------PSGFTLLQGPPGTGKTKTIIALLSVLLHTMTPIKD 1421
Query: 75 ------QMKFRTLVCTPTNVAIKELAARVV 98
Q + LV P+N A+ E+A R++
Sbjct: 1422 DSKLKNQAPIKILVTAPSNAAVDEIATRIL 1451
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 214/407 (52%), Gaps = 40/407 (9%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASS---SYM 356
+H++ +EC +R+L+ + + + E +L + + LS A S S +
Sbjct: 1744 MHQQLTECSGKIRRLRDEV------TTIRAKMTETILSKASI--IACTLSKAGSGDFSEL 1795
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
H + L+IDEAAQ E + +P++ + VL GD QLPA V+S V+ +A +
Sbjct: 1796 KHG-----FDALIIDEAAQAVELSTLVPIR-ERVARVVLVGDPKQLPATVKSVVAAKARY 1849
Query: 417 GRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE--KRFLH 474
RSLFER++ G + +L +QYRMHP + FP+ FY + D +V +R +
Sbjct: 1850 DRSLFERIAESGVAPSMLRVQYRMHPFLRDFPSRRFYGGMLTDGPSVMERVQKVCPGVYA 1909
Query: 475 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKE-KLSIGIVSPY 533
+ P+ +V REE + S N VE + + + N+++ D + K S+G VSPY
Sbjct: 1910 RTSFQPFLLYDVENSREEDMNGSKYNRVEAAFCVSLCQNMFECCADVRNNKWSVGFVSPY 1969
Query: 534 SAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
QV +++++ + A +++V ++DGFQG E+D+I+ S VRS+ G IGFL + +R
Sbjct: 1970 KEQVRVLRQEITRSGI-PASVSIEVNTVDGFQGREKDVIVFSCVRSSKRGGIGFLRDIRR 2028
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKE 653
+NVA+TRAR CL+++GN TL R ++ W ALV A R+ ++ G + AV K
Sbjct: 2029 LNVAITRARFCLYVVGNVNTLVRDET-WAALVKSARDRRLIIRSE-----GDSFPAVAKR 2082
Query: 654 L--DELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVI 698
L D+ EL + +K + LK+ T+ PTK S +
Sbjct: 2083 LESDKYREL---------AAHYKAMHDKAALKAV--ATAKPTKASAV 2118
>gi|393212617|gb|EJC98117.1| hypothetical protein FOMMEDRAFT_97735 [Fomitiporia mediterranea
MF3/22]
Length = 1825
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 168/283 (59%), Gaps = 16/283 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+EP +F ++IDEAAQ E S IPL+ + + V+ GD QLP V S +++ + +S
Sbjct: 1543 LEPFDFSMVIIDEAAQSIELSSLIPLKYTSTR-CVMVGDPQQLPPTVLSPEASKWGYDQS 1601
Query: 420 LFERLSYL-GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
LF RL + HLLSIQYRMHP IS P+ FY ++RD + K++ E+ + + P +
Sbjct: 1602 LFVRLQKCRPEAVHLLSIQYRMHPEISLLPSKVFYGGRLRDGPDMDKKT-EQLWHNEPRF 1660
Query: 479 GPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
G Y F +V G+EE I HS N E ++ L K + +GIVSPY +Q
Sbjct: 1661 GAYKFFSVENGKEEQARIGHSIYNQAECRTIIAAYDRLRKQFSSINFDYRVGIVSPYRSQ 1720
Query: 537 VVAIQ----EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNS 591
V+ ++ ++ G++ V+ F ++DGFQG E+D+I++S VR+ ++GFL++
Sbjct: 1721 VLEMRKLFTQRFGAEIVSKVDFN----TVDGFQGQEKDIIMLSCVRAGTSLATVGFLADI 1776
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+R+NVA+TRAR L+I G+A TL R VW+ +V DA +R CF
Sbjct: 1777 RRMNVAITRARSSLFIFGHAPTLQRSNRVWKDIVDDARSRACF 1819
>gi|110740248|dbj|BAF02022.1| hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 7/304 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 63 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 121
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LL++QYRMHP I FP+ YFY+
Sbjct: 122 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 181
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V + ++ + + PY F ++ GRE S N+ E + + L
Sbjct: 182 GRLTDSESV-STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYL 240
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L + K+S+G+++PY Q+ ++ + G+ + + ++D FQG E D+
Sbjct: 241 HLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDV 300
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++N G +GF+++ +R+NVALTRA+ LW++GNA L + + W AL+ DA AR
Sbjct: 301 IIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAKAR 358
Query: 632 QCFF 635
CF
Sbjct: 359 NCFM 362
>gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|4938486|emb|CAB43845.1| putative protein [Arabidopsis thaliana]
gi|7269910|emb|CAB81003.1| putative protein [Arabidopsis thaliana]
gi|332660321|gb|AEE85721.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1311
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 7/304 (2%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + +SS L S + +VIDEAAQ E PL L G V
Sbjct: 908 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 966
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA V SK + + RSLFER G LL++QYRMHP I FP+ YFY+
Sbjct: 967 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 1026
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC--RNMVEVSVVMKILL 512
++ DS +V + ++ + + PY F ++ GRE S N+ E + + L
Sbjct: 1027 GRLTDSESV-STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYL 1085
Query: 513 NLYKAWID-SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+L + K+S+G+++PY Q+ ++ + G+ + + ++D FQG E D+
Sbjct: 1086 HLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDV 1145
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++N G +GF+++ +R+NVALTRA+ LW++GNA L + + W AL+ DA AR
Sbjct: 1146 IIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAKAR 1203
Query: 632 QCFF 635
CF
Sbjct: 1204 NCFM 1207
>gi|357488337|ref|XP_003614456.1| Helicase sen1 [Medicago truncatula]
gi|355515791|gb|AES97414.1| Helicase sen1 [Medicago truncatula]
Length = 853
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 181/347 (52%), Gaps = 15/347 (4%)
Query: 294 VGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS- 352
V + L+ K+R+ + SS + N SA D D +++ L A++ ST S
Sbjct: 417 VSLDELVKKKRASANI------SSTGKQNNASAGSND---DSIRAAILDEATIVFSTLSF 467
Query: 353 SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
S + S + ++IDEAAQ E + +PL + K L GD QLPA V S ++
Sbjct: 468 SGSHVFSKLSRNFDVVIIDEAAQAVEPATLVPLA-NKCKKVFLVGDPAQLPATVISDIAT 526
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+G SLFERL GY +L QYRMHP I FP+ FY N + D V+ ++ E+ +
Sbjct: 527 NHGYGTSLFERLMQAGYPIKMLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQT-ERDW 585
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIV 530
+GP+SF ++ G+E S N+ EV V+ + L + K + I+
Sbjct: 586 HRYRCFGPFSFFDIHEGKEARPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAII 645
Query: 531 SPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
SPY AQV Q++ + SA V + ++DG QG E+D+ I S VR++ G IGFL +
Sbjct: 646 SPYKAQVNLFQQRFEETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDD 705
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+R+NV +TRA+ + ++G+A TL R+ W LV A R CFF A
Sbjct: 706 IRRMNVGITRAKSAVLVVGSASTL-RRSVQWNKLVESAEKRDCFFKA 751
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 182/314 (57%), Gaps = 8/314 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
K++ + L++ L A + ST S S L S++M+ + ++IDEA Q E + IPL+
Sbjct: 1460 KEIEKRQLQAKILSEAQVICSTLSGSAHDFLASMSMK-FDQVIIDEACQCVELSAIIPLR 1518
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSKHLLSIQYRMHPSIS 445
G K ++ GD QLP V S+ + + SLF R+ S +LL +QYRMHP IS
Sbjct: 1519 Y-GCKKCIMVGDPNQLPPTVLSQKAASFKYEESLFVRMQRTNPESVYLLDVQYRMHPQIS 1577
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEV 504
FP++ FY++K+ D + +++ P+ PY F ++ G ++ ++ S N E
Sbjct: 1578 KFPSAQFYKSKLTDGPHMMEKNNRPWHADFPL-SPYRFFDIGGRHQQNVQTKSFFNPSEA 1636
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
V ++++ L + K + IGI+SPY Q+ +++ KY N + ++DGF
Sbjct: 1637 KVALELVEKLMQILPQDKFRGRIGIISPYKEQIRTLKDTFVRKYGNLILNEIDFNTVDGF 1696
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E+++II+S VR++ GS+GFLS+ +R+NVALTRAR LWILGN ++L R K +W L
Sbjct: 1697 QGQEKEIIIMSCVRASESGSVGFLSDVRRMNVALTRARTTLWILGNKQSLRRDK-IWSKL 1755
Query: 625 VHDANARQCFFNAD 638
+ DA +R C +A+
Sbjct: 1756 IADAESRDCVTSAE 1769
>gi|428178714|gb|EKX47588.1| hypothetical protein GUITHDRAFT_137364 [Guillardia theta CCMP2712]
Length = 1135
Score = 186 bits (473), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 219/430 (50%), Gaps = 56/430 (13%)
Query: 323 LPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYM-LHSVAMEPLNFLVIDEAAQLKESES 381
+ S+ E+D D L++ L A + L+T SS+ + S ++ ++IDEA Q E+ +
Sbjct: 545 IKSSKEEDT--DQLRTMLLDDAQVILTTLSSAGLDCFSRLQNKIDTVIIDEACQSVEAGT 602
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
IPL L G + +L GD QLPA V S+ S+ A + RSLFERL + LL++QYRMH
Sbjct: 603 LIPLLL-GARRCILVGDPRQLPATVISQSSSAAIYQRSLFERLMSCNHPVALLNVQYRMH 661
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSC-RN 500
P I+ FP+ YFYE ++ D+ + +R +R+ P +GP+ F ++ +E+ + S RN
Sbjct: 662 PEITRFPSEYFYEGRLVDAENLGRRKEGERYQADPWFGPFHFFDLIDSKEQRSDGSSLRN 721
Query: 501 MVE---VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL----GSKYVNSA- 552
+ E V++++K L++ Y + K K I I++PY Q I L G V+ +
Sbjct: 722 VAEAKFVALLVKELISRYSQRGELKGK--IAILTPYRQQRNEITSSLKRLVGPHAVSESV 779
Query: 553 -------------GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
G+++ VM++D QG E D++I S VR+N G +GFL + +R+NVALT
Sbjct: 780 ENRSPEVVTELARGYSIDVMTVDSCQGQERDIVIFSCVRANTRG-VGFLEDVRRMNVALT 838
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQ-----------------------CFFN 636
RARH L ++GN+ +L + W+A + +A R+ + N
Sbjct: 839 RARHSLLVIGNSNSL-KASEPWKAFLANAKKRERVTVIESKKMPPDFTAGPPEPGSKYLN 897
Query: 637 ADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKS 696
DD+D+ + +E +E + + QR + +E + RK SD
Sbjct: 898 DHDDEDI---VPCETEECGRSEEADREKDQAMNEQRNALKLAEEEQRRKRKAESDTQGSK 954
Query: 697 VIHLLLKLSN 706
H+ KL +
Sbjct: 955 RRHVEKKLDD 964
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 197/372 (52%), Gaps = 17/372 (4%)
Query: 279 ELLSHSVDEGLSKSIVGIK--YLLHKR-RSECHFVLRKLQSSFNELN-LPSAVEKD--LL 332
E L H+ DE L K + ++ Y H E + RK Q+ ELN L ++ D +
Sbjct: 1434 ESLKHARDEKL-KEMTNLQNNYARHNALDQETQAMGRKRQALAAELNKLRDKLKSDGRSM 1492
Query: 333 EDLLKSF---CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
E L + ++ A + ST S S ++ + ++IDEAAQ E S IPL+
Sbjct: 1493 EALRRKARFEIIRDADVICSTLSGSGH-EALLDQTFEMVIIDEAAQAVELSSLIPLKYES 1551
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFP 448
K ++ GD QLP V S+ + + +SLF+R + HLLSIQYRMHP IS FP
Sbjct: 1552 -KRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFFKKSPKAVHLLSIQYRMHPEISRFP 1610
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCRNMVEVSVV 507
+ FY ++I+D +++ + R H P+ G Y NV G EE ++S +N EV V
Sbjct: 1611 SKAFYNDRIQDGPNMKELT--ARPWHAEPLLGIYKIFNVNGNAEEGPQNSLKNRAEVEVA 1668
Query: 508 MKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGG 567
+ L + + + IGIVSPY AQ+ ++ + S + ++DGFQG
Sbjct: 1669 TALYRRLSTQFREFGLERKIGIVSPYRAQIKELERSFFQAFGQSVLDEIDFNTVDGFQGQ 1728
Query: 568 EEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E+D+II+S VR G SIGF+++ +R+NVA+TRA+ L+ILGN TL R +S+W+ +
Sbjct: 1729 EKDIIILSCVRGGPGVKSIGFMADVRRLNVAITRAKSALFILGNVPTLERSESIWKQAIA 1788
Query: 627 DANARQCFFNAD 638
DA R N D
Sbjct: 1789 DARERNLIVNVD 1800
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 21/85 (24%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
+N+ QA A++ + LI GPPGTGKT T+ L+ +
Sbjct: 1289 INEPQATAIIGAM------ASTGFVLIQGPPGTGKTSTICALVARFMSRRAIPITAPGSK 1342
Query: 76 ---MKFRTLVCTPTNVAIKELAARV 97
K + L+C P+N AI E+A R+
Sbjct: 1343 EVPAKPKILICAPSNAAIDEIAQRL 1367
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 175/318 (55%), Gaps = 19/318 (5%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
D L ++ L A + ST S + ++A L+IDEAAQ E S IPL+ +
Sbjct: 1502 DTLRRGIQRDILNEADVVCSTLSGAGH-DTLAQHDFEMLIIDEAAQAIELSSLIPLKYNS 1560
Query: 390 IKHAVLFGDECQLPAMVESKVSNEAC---FGRSLFERLS-YLGYSKHLLSIQYRMHPSIS 445
+ VL GD QLP V +S EAC + +SLF RL + HLLSIQYRMHP IS
Sbjct: 1561 AR-CVLVGDPQQLPPTV---LSQEACRYSYNQSLFVRLQKRCPNAVHLLSIQYRMHPDIS 1616
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVS 505
FP+ FYE+KI+D + + + + H +G Y F NV G EE S +N+ E
Sbjct: 1617 RFPSRVFYESKIQDGPRMDEVTKQPWHTHV-KFGTYKFFNVSQGVEEQSGRSIKNLAECQ 1675
Query: 506 VVMKI---LLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
V + + L YKA+ DS+ +G+VS Y AQ+V ++ ++ + ++
Sbjct: 1676 VAVALYNRLCQEYKAFNFDSR----VGVVSMYRAQIVELRRHFEKRFGKDIIGRIDFNTV 1731
Query: 562 DGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
DGFQG E+D+II+S VRS G S+GFLS+ +R+NVALTRA+ L+ILGNA TL R
Sbjct: 1732 DGFQGQEKDVIILSCVRSGPGLQSVGFLSDVRRMNVALTRAKSSLFILGNAPTLERSNDT 1791
Query: 621 WEALVHDANARQCFFNAD 638
W +V DA +R D
Sbjct: 1792 WREIVVDARSRLALLQVD 1809
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 27/91 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N+ QA A++S + LI GPPGTGKT T+ L+ + + R
Sbjct: 1295 VNEPQAAAIISSM------EAEGFSLIQGPPGTGKTSTICGLVARFVSRRQRPSVPIVIG 1348
Query: 81 --------------LVCTPTNVAIKELAARV 97
L+C P+N AI E+A R+
Sbjct: 1349 RNAPPAEKPSVAKILICAPSNAAIDEIAHRL 1379
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 195/350 (55%), Gaps = 17/350 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E ++IDEAAQ E
Sbjct: 1514 NHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVIIDEAAQSIEL 1572
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 1573 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 1631
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFI 494
RMHP IS FP+ FY+ K++D + +RK+ + HG + GPY F +V G
Sbjct: 1632 RMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPW-----HGSELLGPYRFFDVQGMHSSAA 1686
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E++V M++ L + + IGI++PY Q+ ++ + +KY +S
Sbjct: 1687 KGHSLINIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIF 1746
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++
Sbjct: 1747 TTVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQS 1805
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
L R + W AL+HDA RQ + D + L K +++ EL+ ++ + P
Sbjct: 1806 LVRGE-FWRALIHDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAP 1854
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV-----SMLLVILLQMKF---- 78
LN +QA+A+ S + D+ A LI GPPG+GKTKT+ ++L IL + +
Sbjct: 1311 LNPAQAKAIKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPK 1364
Query: 79 ---------------RTLVCTPTNVAIKELAARVVKLVK 102
+ LVC P+N A+ EL R + VK
Sbjct: 1365 ITSDSAQANKSGPSKKLLVCAPSNAAVDELVMRFKEGVK 1403
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 177/314 (56%), Gaps = 14/314 (4%)
Query: 341 LKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
LK A + ST ASS ML S+ + ++IDEA Q E IP++ G +A++ GD
Sbjct: 1440 LKEAEIICSTLSASSHNMLKSLGVA-FETVIIDEACQCIELSVLIPMKY-GCTNAIMVGD 1497
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S V+ ++ + +SLF R+ S H+L QYRMHP IS FP FY +
Sbjct: 1498 PNQLPPTVLSTVAAKSKYEQSLFVRMQTANPSALHMLDTQYRMHPDISVFPREQFYRGIL 1557
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
+D + + +++ +K + PY+F +V G +E HS N EV + + LY+
Sbjct: 1558 KDGAGMAEKT-KKPWHEYKQLAPYAFFDVAGNQEATRNHSFFNDAEVHLADQ----LYRL 1612
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ K+ IGI+SPY QV+ ++ +Y ++ S+DGFQG E+D+II+S V
Sbjct: 1613 MSNMYGKIDIGIISPYKQQVLRLKRHFTREYGGDILDKIEFNSVDGFQGQEKDIIIMSCV 1672
Query: 578 R-SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
R S + S+GFL++ +R+NVA TRAR +WILGNA TL+R ++W +V+DA R
Sbjct: 1673 RASPDSDSVGFLADKRRMNVAFTRARSSMWILGNADTLSR-NTIWRKVVNDARNRDMLM- 1730
Query: 637 ADDDKDLGKAILAV 650
D ++ L K L V
Sbjct: 1731 -DGNRPLRKQDLIV 1743
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------R 79
+NDSQA A+ L + LI GPPGTGKTKT+ ++ L K R
Sbjct: 1235 VNDSQAAAIYGSL------NNTGFSLIQGPPGTGKTKTILGIVGSFLSKKASDIGNDNRR 1288
Query: 80 TLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
L+C P+N A+ EL R+ + S + I+ +G +E V+S V++
Sbjct: 1289 ILLCAPSNAAVDELVLRLSDGIYSSSGQKSEPK-------IIRIGRSE--AVNSKVKKYV 1339
Query: 140 LDYRVKRL 147
L+ RV L
Sbjct: 1340 LEERVDAL 1347
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 196/350 (56%), Gaps = 17/350 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E ++IDEAAQ E
Sbjct: 1507 NHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVIIDEAAQSIEL 1565
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 1566 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 1624
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFI 494
RMHP IS FP+ FY+ K++D + +RK+ + HG + GPY F +V G
Sbjct: 1625 RMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPW-----HGSELLGPYRFFDVQGMHSSAA 1679
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E++V M++ L + + IGI++PY Q+ ++ + +KY +S
Sbjct: 1680 KGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIF 1739
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
AV+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++
Sbjct: 1740 TAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQS 1798
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
L R + W AL++DA RQ + D + L K +++ EL+ ++ + P
Sbjct: 1799 LVRGE-FWRALIYDARERQLYTEGDILRILQKPQISLDMELNNVEMVDAP 1847
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV-----SMLLVILLQMKF---- 78
LN +QA+A+ S + D+ A LI GPPG+GKTKT+ ++L IL + K
Sbjct: 1304 LNPAQAKAIKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPK 1357
Query: 79 ---------------RTLVCTPTNVAIKELAARVVKLVK 102
+ LVC P+N A+ EL R + VK
Sbjct: 1358 IASDSAQASKSTPSKKLLVCAPSNAAVDELVMRFKEGVK 1396
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 182/336 (54%), Gaps = 18/336 (5%)
Query: 311 LRKLQSSFNELNLPSAVEKDLLEDL---LKSFCLKRASLFLSTASSS---YMLHSVAMEP 364
+ +L +E A K L+ L+ L+ A + ST S S YM + P
Sbjct: 1 MHELSQQLDEARDQQAASKRYLDAATRKLRMQILQDADVICSTLSGSGHDYM----SQLP 56
Query: 365 LNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFE 422
+F +VIDEA Q E S IPL+ + + +L GD QLP V S+ +++A + +SLF
Sbjct: 57 FDFETVVIDEACQCTEPASLIPLRYNATQ-CILVGDPLQLPPTVLSQAASKAGYDQSLFV 115
Query: 423 RLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
R+ + HLLSIQYRMHP+IS FP+ FY++++ D + R+ ++ + PY
Sbjct: 116 RMQRFAPTAVHLLSIQYRMHPAISAFPSKAFYDSRLMDGPDMASRTTQRWHTEDTFFPPY 175
Query: 482 SFINVFGGREE-FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
+F + G REE HS N E + + I L + + D +GI++ Y+ QV I
Sbjct: 176 TFYHPIGAREERGRHHSFINRTEAGMTVAIYSRLTRTFPDIDFAYRVGIITAYAGQVGEI 235
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS--NNGGSIGFLSNSKRVNVAL 598
+ + + + + ++DGFQG E+D+II+S VR ++ IGFL +++R+NVAL
Sbjct: 236 RRQFRQSFPADVVSTLDINTVDGFQGQEKDIIILSCVRGGKDDDNGIGFLKDTRRMNVAL 295
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRA+ L+++GN L + K+ W+AL+ DA R F
Sbjct: 296 TRAKSSLFVIGNQSALVQDKN-WKALIDDARERGTF 330
>gi|42566850|ref|NP_193292.3| protein MAGATAMA 3 [Arabidopsis thaliana]
gi|384950687|sp|B6SFA4.1|MAA3_ARATH RecName: Full=Probable helicase MAGATAMA 3; AltName: Full=SEN1-like
protein
gi|209574484|gb|ACI63222.1| MAA3 [Arabidopsis thaliana]
gi|332658227|gb|AEE83627.1| protein MAGATAMA 3 [Arabidopsis thaliana]
Length = 818
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 170/309 (55%), Gaps = 13/309 (4%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L+ A++ +T S S L + + + ++IDEAAQ E + IPL + K
Sbjct: 452 DSIRTAILEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLA-TRCKQ 510
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S V+ ++ +G S+FERL GY +L QYRMHP I FP+ F
Sbjct: 511 VFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQF 570
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEH-----SCRNMVEVSV 506
YE + D S + ++ R H +GP+ F ++ G+E +H S N+ EV
Sbjct: 571 YEGALEDGSDIEAQT--TRDWHKYRCFGPFCFFDIHEGKES--QHPGATGSRVNLDEVEF 626
Query: 507 VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQG 566
V+ I L + + K + I+SPY+ QV +++ + A V + ++DGFQG
Sbjct: 627 VLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQG 686
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E+D+ I S VR+N G IGFLSNS+R+NV +TRA+ + ++G+A TL + +W+ L+
Sbjct: 687 REKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIE 745
Query: 627 DANARQCFF 635
A R F
Sbjct: 746 SAEQRNRLF 754
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 181/330 (54%), Gaps = 15/330 (4%)
Query: 312 RKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLV 369
R++ +S +E L S DL + L A + +T S S M +++E ++
Sbjct: 1457 RQIDNSKDEERLQSR-NSDLSRRRAQEAILNDAHIICATLSGSGHEMFQGLSIE-FETVI 1514
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
IDEAAQ E + IPL+ G VL GD QLP V SKV++ + +SLF R+
Sbjct: 1515 IDEAAQCVELSALIPLKY-GCAKCVLVGDPKQLPPTVFSKVASRHQYSQSLFARMEKNHP 1573
Query: 430 SK-HLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFIN 485
+ HLL QYRMHP IS FP+ FY+ K+ D +T+RK+ + + L +GPY F +
Sbjct: 1574 NDVHLLDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQPWHQSML----FGPYRFFD 1629
Query: 486 VFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
V G + + HS N E+ V MK+ L + D + IGI++PY +Q+ ++ +
Sbjct: 1630 VAGQQSAAPKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRGKIGIITPYKSQLTELKTRF 1689
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
S Y ++ + D FQG E ++II S VR+++ G +GFL + +R+NV LTRA+
Sbjct: 1690 ASVYGAQIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLEDIRRMNVGLTRAKSS 1749
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCF 634
+W+LG+A +L+R + W LV DA R+ F
Sbjct: 1750 MWVLGHAPSLSRGE-FWRGLVEDAQERKRF 1778
Score = 46.2 bits (108), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 36/142 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N +QA+A+ S + D+ A LI GPPG+GKTKT++ ++ +L R
Sbjct: 1267 VNKAQAKAIKSAI-----DNDA-FTLIQGPPGSGKTKTITAIVGAVLSDSLRNRGTTITV 1320
Query: 81 -------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
LVC P+N A+ EL R +K ++ + R +I+ LG +
Sbjct: 1321 PGQQRSETASKKLLVCAPSNAAVDELVMRFKAGIK-TLNGEVRKV------NIVRLGRQD 1373
Query: 128 RLKVDSGVEEIYLDYRV-KRLA 148
+L ++ V+++ L+ + KRL
Sbjct: 1374 KL--NAAVQDVCLEGLISKRLG 1393
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E ++IDEAAQ E
Sbjct: 1498 NHSAARDADLNRRRIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVIIDEAAQSIEL 1556
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ + HLL IQY
Sbjct: 1557 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQANHPRDVHLLDIQY 1615
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP IS FP+S FY+ K++D + R + + G + GPY F +V G + + HS
Sbjct: 1616 RMHPEISAFPSSTFYDGKLQDGPDM-ARLRTRPWHQGELLGPYRFFDVQGLHQSAAKGHS 1674
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
NM E+ V M++ L + IGI++PY Q+ ++ + ++Y N +
Sbjct: 1675 LINMAELRVAMQLYERLSTDFRGIDFAGKIGIITPYKGQLREMKNQFAARYGNEIFSKID 1734
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1735 FNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1793
Query: 618 KSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ W L+ DA R + D K L + K +D D
Sbjct: 1794 E-FWNGLIKDARRRNVYTEGDILKILQRPQFTGYKNIDMFD 1833
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 162/278 (58%), Gaps = 6/278 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++IDEAAQ E S IP + S H VL GDE QLP V S + + + +SLF RL
Sbjct: 1533 FQMIIIDEAAQAIELSSLIPFKFS-CSHCVLVGDEKQLPPTVISMQATKFRYNQSLFVRL 1591
Query: 425 SYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSF 483
+ +LLSIQYRMHPSIS P+ FY+++++D + ++ + + P +G Y F
Sbjct: 1592 QRQSPNAVNLLSIQYRMHPSISALPSKVFYDSRLKDGPDMEAKTKQP-WQFDPKFGAYRF 1650
Query: 484 INVFGGREEFI-EHSCRNMVEVSVVMKILLNLYKAWIDSKE-KLSIGIVSPYSAQVVAIQ 541
NVF G E+ S +N+ E V + + L + S + +GI++ Y Q+V ++
Sbjct: 1651 FNVFRGVEDRAGAKSSKNIAECEVAVALYSRLVTQFGSSGDFAAKVGIIAGYKGQIVELR 1710
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNSKRVNVALTR 600
+ +++ + ++DGFQG E+D+II S VR+ G + IGF+S+++R+NVALTR
Sbjct: 1711 RRFENRFGRDITKKIAFNTVDGFQGQEKDVIIFSCVRAGTGTTNIGFMSDTRRMNVALTR 1770
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
A+ L+ILG+A TL+R W+ +V DAN R+ + D
Sbjct: 1771 AKSSLFILGHADTLSRSDETWKQIVADANERKLMTDVD 1808
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 20/85 (23%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------ 74
++N+ QA A+ + H LI GPPGTGKT T+ L+ L
Sbjct: 1301 SVNEPQAVAITKSI------HTKGFSLIQGPPGTGKTSTICGLVSAYLYEANRRITRPME 1354
Query: 75 --QMKFRTLVCTPTNVAIKELAARV 97
+ R L+C P+N AI E+A R+
Sbjct: 1355 NDPNQPRILLCAPSNAAIDEVAFRL 1379
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 194/353 (54%), Gaps = 17/353 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + A + +T S S M S+++E +VIDEAAQ E
Sbjct: 1494 NQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1552
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G VL GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1553 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1610
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP IS FP++ FY+ +++D + +R R + K L GPY F +V G
Sbjct: 1611 YRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYRFFDVQGLHSSAP 1666
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E+ V MK+ L + IGI++PY Q+ ++ + +KY NS
Sbjct: 1667 KGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSIF 1726
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1727 TKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1785
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESR 666
L + + W L+ DA +R + D L K +++ KEL +++ + P ++
Sbjct: 1786 LVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDVEMIDAPSAK 1837
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 31/104 (29%)
Query: 18 ETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
E+ P + + +N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L
Sbjct: 1281 ESLKPIIDTYNVNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTP 1334
Query: 77 KF------------------------RTLVCTPTNVAIKELAAR 96
F + LVC P+N A+ EL R
Sbjct: 1335 VFAEQKIARPGSSVNLKPATRTTNSKKLLVCAPSNAAVDELVMR 1378
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 194/353 (54%), Gaps = 17/353 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + A + +T S S M S+++E +VIDEAAQ E
Sbjct: 1494 NQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1552
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G VL GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1553 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1610
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP IS FP++ FY+ +++D + +R R + K L GPY F +V G
Sbjct: 1611 YRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYRFFDVQGLHSSAP 1666
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E+ V MK+ L + IGI++PY Q+ ++ + +KY NS
Sbjct: 1667 KGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSIF 1726
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1727 TKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1785
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESR 666
L + + W L+ DA +R + D L K +++ KEL +++ + P ++
Sbjct: 1786 LVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDVEMIDAPSAK 1837
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 31/104 (29%)
Query: 18 ETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
E+ P + + +N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L
Sbjct: 1281 ESLKPIIDTYNVNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTP 1334
Query: 77 KF------------------------RTLVCTPTNVAIKELAAR 96
F + LVC P+N A+ EL R
Sbjct: 1335 VFAEQKIARPGSSVNLKPATRTTNSKKLLVCAPSNAAVDELVMR 1378
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 194/353 (54%), Gaps = 17/353 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + A + +T S S M S+++E +VIDEAAQ E
Sbjct: 1494 NQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1552
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G VL GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1553 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1610
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP IS FP++ FY+ +++D + +R R + K L GPY F +V G
Sbjct: 1611 YRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYRFFDVQGLHSSAP 1666
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E+ V MK+ L + IGI++PY Q+ ++ + +KY NS
Sbjct: 1667 KGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSIF 1726
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1727 TKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1785
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESR 666
L + + W L+ DA +R + D L K +++ KEL +++ + P ++
Sbjct: 1786 LVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDVEMIDAPSAK 1837
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 31/104 (29%)
Query: 18 ETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
E+ P + + +N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L
Sbjct: 1281 ESLKPIIDTYNVNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTP 1334
Query: 77 KF------------------------RTLVCTPTNVAIKELAAR 96
F + LVC P+N A+ EL R
Sbjct: 1335 VFAEQKIARPGSSVNLKPATRTTNSKKLLVCAPSNAAVDELVMR 1378
>gi|336370055|gb|EGN98396.1| hypothetical protein SERLA73DRAFT_109860 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382798|gb|EGO23948.1| hypothetical protein SERLADRAFT_450249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1935
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 187/340 (55%), Gaps = 27/340 (7%)
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLSTASSSYMLHSVAMEPLNF--L 368
L F+ L ++ L+ + F L+ A + ST S + H V +E L+F +
Sbjct: 1465 LTQQFDRLKDKQKSDRRTLDATRRKFRVEVLQEADVICSTLSGAG--HDV-LEQLDFEMV 1521
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC---FGRSLFERLS 425
+IDEAAQ E S IPL+ + ++ GD QLP V +S EAC + +SLF RL
Sbjct: 1522 IIDEAAQAIELSSLIPLKFK-CQRCIMVGDPQQLPPTV---LSQEACKFQYNQSLFVRLQ 1577
Query: 426 -YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+ + HLLSIQYRMHP IS P+ FY+ ++ D + ++ + H P +G Y F
Sbjct: 1578 KHRPEAVHLLSIQYRMHPDISQLPSRIFYQGRLLDGPDMDVKTKQPWHSH-PKFGTYRFF 1636
Query: 485 NVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV----A 539
NV G+E E HS +N +E V + + L K + +GIV+ Y QV+ A
Sbjct: 1637 NVSKGQEQEAGGHSLKNNLESQVAVAMYSRLCKEFPAIDFDFRVGIVTMYRGQVLELKRA 1696
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVAL 598
Q + GS ++ F ++DGFQG E+D+II+S VR+ G S+GFL++ +R+NVA+
Sbjct: 1697 FQRRFGSDIISKVHF----HTVDGFQGQEKDVIILSCVRAGPGLQSVGFLADVRRMNVAI 1752
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
TRAR L+ILGNA TL R W ++V+DA +R F + D
Sbjct: 1753 TRARSSLFILGNAPTLERSDENWRSIVNDARSRSFFTDTD 1792
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 37/152 (24%)
Query: 17 NETFGPSLSS-TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
N T ++++ ++N+ QA+A+L L+ LI GPPGTGKT T+ L+ +
Sbjct: 1263 NSTIKQAMAAYSVNEPQAKAILGSLQAQ------GFVLIQGPPGTGKTSTICGLVEAFMS 1316
Query: 76 MKFR---------------------TLVCTPTNVAIKELAARVVKLVKESVERDCRDALF 114
+ R L+C P+N A+ E+A R+ + + + R AL
Sbjct: 1317 RRPRPATAIHVGRGQRPTDKAPPKKALLCAPSNAAVDEVAHRLKEGYRGAERRGA--AL- 1373
Query: 115 FPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
++ +GN++ + + V++I LDY V++
Sbjct: 1374 ----KVVRVGNDKVMNI--SVKDISLDYLVEQ 1399
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 11/347 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A +L ++ + A + ST S S M S+++E ++IDEAAQ E
Sbjct: 851 NHSAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIE-FETVIIDEAAQSIEL 909
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQY 438
+ IPL+ G VL GD QLP V SK ++ + +SLF R+ + HLL QY
Sbjct: 910 SALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPNDVHLLDTQY 968
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE-H 496
RMHP IS FP+ FY+ K++D + K+ HG + GPY F +V G + H
Sbjct: 969 RMHPEISKFPSQAFYDGKLQDGPGMG--PLRKKPWHGSELLGPYRFFDVQGMHSNAAKGH 1026
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ E++V M++ L + + IGI++PY Q+ ++ + +KY S AV
Sbjct: 1027 SLVNIAELTVAMRLYDRLLADYKNYDFTGKIGIITPYKGQLRELKARFAAKYGGSIFTAV 1086
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+ + D FQG E ++II S VR+++ G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1087 EFNTTDAFQGRECEIIIFSCVRASSRG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQ 1145
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNP 663
+ W AL+HDA R + D + L K +++ EL+ ++ + P
Sbjct: 1146 GE-FWRALIHDAQGRDLYTEGDIIRILQKPQISLDMELNNVEMVDAP 1191
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +Q++AV S + D+ A LI GPPG+GKTKT+ ++ LL
Sbjct: 648 LNPAQSKAVKSAV-----DNDA-FTLIQGPPGSGKTKTIVAIVGALLTPILAERRISQPK 701
Query: 75 ------QMKFRT-----LVCTPTNVAIKELAARVVKLVK 102
QM T LVC P+N A+ EL R + +K
Sbjct: 702 PTSDPAQMSKSTPSKKLLVCAPSNAAVDELVMRFKEGIK 740
>gi|358055281|dbj|GAA98737.1| hypothetical protein E5Q_05425 [Mixia osmundae IAM 14324]
Length = 1976
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 211/450 (46%), Gaps = 47/450 (10%)
Query: 225 IAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISL-LDSFETLLFEDNLVSEELEELL-- 281
I AP + I R+ +DN V+ ++ + DS +D + E+++ LL
Sbjct: 1356 ICAPSNAAIDEIAARLKNGVRAEDNRMVVPKIVRIGADSAIHAAVKDLFIDEQIDALLND 1415
Query: 282 -SHS---VDEGLS----------------KSIVGIKYLLHKRRSECHFVLRKLQSSFNEL 321
SH DE LS + ++ + L + R V R EL
Sbjct: 1416 GSHGDDKADEALSALRRQMEELKAERAQTQDMLARQGLDDQERGRLADVRRIQTREIYEL 1475
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASL-------------FLSTASSSYMLHSVAMEPLNF- 367
L EKD D ++ +R + LS + YM A P F
Sbjct: 1476 GLRLDAEKDKTGDRRRAQDTRRFQMRNQVLCDCDIICATLSGSGHDYM----AQLPFQFE 1531
Query: 368 -LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
++IDEAAQ E S IPL+ G K ++ GD QLP V S V+ +A + SLF R+
Sbjct: 1532 TVIIDEAAQSVEISSLIPLRY-GAKRCIMVGDPRQLPPTVLSTVAKDANYASSLFVRMQK 1590
Query: 427 -LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
HLLSIQYRMHPSIS +P+ FY ++RD + + + P+ PYSF++
Sbjct: 1591 NHADGVHLLSIQYRMHPSISAWPSEVFYGGELRDGPGIAALTASS-WHRNPLLPPYSFLH 1649
Query: 486 VFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G ++ HS N E V + I K D+ + +G+V+ Y AQV ++
Sbjct: 1650 CSGAQQTGRNHSVFNPEEARVGVAIFKQFLKEVGDAISDIRVGVVTMYKAQVFELRRLFK 1709
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG-SIGFLSNSKRVNVALTRARHC 604
+ + + ++DGFQG E+D+II S VRS G IGFL +++R+NVALTRA+
Sbjct: 1710 LAFGDDIVHRLDFSTVDGFQGQEKDVIIFSCVRSGQGSDPIGFLRDARRMNVALTRAKSS 1769
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCF 634
L+ILG+A TL R W L+ +A AR +
Sbjct: 1770 LFILGHAPTL-RTDPTWRRLIENAQARAMY 1798
Score = 48.9 bits (115), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 30/176 (17%)
Query: 53 LIWGPPGTGKTKTVSMLLVILLQMKF--------RTLVCTPTNVAIKELAARVVKLVKES 104
LI GPPGTGKTKT+ L+ L + + L+C P+N AI E+AAR+ V+
Sbjct: 1319 LIQGPPGTGKTKTIIGLVGAFLARRKPSDGLPSEKLLICAPSNAAIDEIAARLKNGVRAE 1378
Query: 105 VERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPLTGWSHCFASM 164
R + P I+ +G + + + V+++++D ++ L L SH
Sbjct: 1379 DNR-----MVVP--KIVRIGADS--AIHAAVKDLFIDEQIDAL------LNDGSHGD--- 1420
Query: 165 VDFLDNCVSLYHTYIDN---ESMKQSEDINGDIIKEKECGKEADVSDVEIKPFLEF 217
D D +S ++ E + + + + ++E G+ ADV ++ + E
Sbjct: 1421 -DKADEALSALRRQMEELKAERAQTQDMLARQGLDDQERGRLADVRRIQTREIYEL 1475
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 13/357 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + + + +T S S M S+++E +VIDEAAQ E
Sbjct: 1495 NQAAARNADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1553
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1554 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1611
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE- 495
YRMHP IS FP++ FY+ +++D + K R H + GPY F +V G +
Sbjct: 1612 YRMHPEISRFPSTAFYDGRLKDGPDMAK--LRVRPWHSSELLGPYRFFDVQGLHSSAPKG 1669
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
HS N+ E+ V MK+ L ++ K IGI++PY Q+ ++ + +KY NS
Sbjct: 1670 HSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSIFTT 1729
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1730 VEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQSLV 1788
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQR 672
+ + W L+ DA +R + D K L + +++ EL ++ + P ++ R
Sbjct: 1789 QGE-FWNGLITDAQSRNLYTQGDVLKLLQRPQISLDMELKDVQMIDAPSAKSLPPSR 1844
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 30/93 (32%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
+N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L F
Sbjct: 1293 VNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPG 1346
Query: 79 ---------------RTLVCTPTNVAIKELAAR 96
+ LVC P+N A+ EL R
Sbjct: 1347 SSGDFRPATRATTSGKLLVCAPSNAAVDELVMR 1379
>gi|409042014|gb|EKM51498.1| hypothetical protein PHACADRAFT_199007 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1989
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 154/281 (54%), Gaps = 6/281 (2%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+EP F +VIDEAAQ E S IPL+ + V+ GD QLP V+S+ + + +S
Sbjct: 1545 LEPYEFEMVVIDEAAQAVELSSLIPLKYR-CQRCVMVGDPQQLPPTVQSQQATGFSYNQS 1603
Query: 420 LFERLS-YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
LF RL + + HLLSIQYRMHP IS P+ FY ++ D + ++ H P +
Sbjct: 1604 LFVRLQKHHPEAVHLLSIQYRMHPDISLLPSRLFYNGRLLDGPDMASKTQRPWHRH-PKF 1662
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
GPY F NV G E HS N E + + + L + + IGIV+ Y AQ++
Sbjct: 1663 GPYRFYNVHRGVETTASHSYLNQAEAEIAVALYNRLRQEFSAHDFDFKIGIVTMYKAQML 1722
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVA 597
++ ++ + V ++DGFQG E+++I++S VR+ G +GFL + +R+NVA
Sbjct: 1723 ELRRAFERRFGTNIHGLVDFNTVDGFQGQEKEIIVLSCVRAGPGVERVGFLRDVRRMNVA 1782
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
LTRA+ ++ILGNA TL R W +V DA R C + D
Sbjct: 1783 LTRAKSSIFILGNAATLERSDEDWRTIVKDARERSCLVDVD 1823
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 62/140 (44%), Gaps = 37/140 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN+ QA A+LS LR A LI GPPGTGKT T+ L+ L + RT
Sbjct: 1307 LNEPQANAILSALR------TAGFSLIQGPPGTGKTSTICGLVQAFLAKRGRTATAIHAG 1360
Query: 81 --------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
L+C P+N AI E+ R +KE + R L P ++ G
Sbjct: 1361 RNSGPADKEPKKKILLCAPSNAAIDEITYR----LKEGISGPGRQ-LVIP--KVVRTGGG 1413
Query: 127 ERLKVDSGVEEIYLDYRVKR 146
KV V ++ LDY V++
Sbjct: 1414 ---KVGLSVRDVTLDYLVEQ 1430
>gi|125564230|gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indica Group]
Length = 2181
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 173/307 (56%), Gaps = 23/307 (7%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPAMV 406
TAS+S + + +VIDEAAQ E + IPLQL G K ++ GD QLPA V
Sbjct: 1535 TASASKFANFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTK-CIMVGDPKQLPATV 1593
Query: 407 ESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR 466
S ++++ + S+FERL GY +L+ QYRMHP IS FP+ +FYENK+ D + +
Sbjct: 1594 MSGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADK 1653
Query: 467 SYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR----NMVEVSVVMKILLNLYKAWIDS 521
S HG GPY F +V GRE+ +++ N E ++IL L +
Sbjct: 1654 SAP---FHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYPSE 1710
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
+ IGI++PY +Q+ ++ + S + +++ ++DGFQG E D++++STVR++N
Sbjct: 1711 FSCMKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASN 1770
Query: 582 GG----------SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
IGF+++ +R+NVALTRAR LWI+GNA+TL + S W +L+ +A R
Sbjct: 1771 SSDSRHHTGEARGIGFVADVRRMNVALTRARFSLWIVGNAKTL-QTNSHWASLLQNAKER 1829
Query: 632 QCFFNAD 638
F + +
Sbjct: 1830 NLFISVN 1836
Score = 47.0 bits (110), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
L S+ NDSQ +AV +R K + LI GPPGTGKT+T+ ++ LL +
Sbjct: 1227 LKSSYNDSQLEAVSIAIRSTSLKAKFDLSLIQGPPGTGKTRTIVAIVSALLSL 1279
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 13/357 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + + + +T S S M S+++E +VIDEAAQ E
Sbjct: 1495 NQAAARNADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1553
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1554 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1611
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE- 495
YRMHP IS FP++ FY+ +++D + K R H + GPY F +V G +
Sbjct: 1612 YRMHPEISRFPSAAFYDGRLKDGPDMDK--LRVRPWHSSELLGPYRFFDVQGLHSSAPKG 1669
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
HS N+ E+ V MK+ L ++ K IGI++PY Q+ ++ + +KY NS
Sbjct: 1670 HSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSIFTT 1729
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1730 VEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQSLV 1788
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQR 672
+ + W L+ DA +R + D K L + +++ EL ++ + P ++ R
Sbjct: 1789 QGE-FWNGLIIDAQSRNLYTQGDILKLLQRPQISLDMELKDVQMIDAPSAKSLPPSR 1844
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 30/93 (32%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
+N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L F
Sbjct: 1293 VNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPG 1346
Query: 79 ---------------RTLVCTPTNVAIKELAAR 96
+ LVC P+N A+ EL R
Sbjct: 1347 SSGDFRPATRATTSGKLLVCAPSNAAVDELVMR 1379
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 192/351 (54%), Gaps = 13/351 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + + + +T S S M S+++E +VIDEAAQ E
Sbjct: 1495 NQAAARNADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1553
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1554 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1611
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE- 495
YRMHP IS FP++ FY+ +++D + K R H + GPY F +V G +
Sbjct: 1612 YRMHPEISRFPSAAFYDGRLKDGPDMAK--LRVRPWHSSELLGPYRFFDVQGLHSSAPKG 1669
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
HS N+ E+ V MK+ L ++ K IGI++PY Q+ ++ + +KY NS
Sbjct: 1670 HSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSIFTT 1729
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1730 VEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQSLV 1788
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESR 666
+ + W L+ DA +R + D K L + +++ EL ++ + P +
Sbjct: 1789 QGE-FWNGLITDAQSRNLYTQGDILKLLQRPQISLDMELKDVQMIDAPSEK 1838
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 30/93 (32%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
+N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L F
Sbjct: 1293 VNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPG 1346
Query: 79 ---------------RTLVCTPTNVAIKELAAR 96
+ LVC P+N A+ EL R
Sbjct: 1347 SSGDFRPATRATTSGKLLVCAPSNAAVDELVMR 1379
>gi|301112122|ref|XP_002905140.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095470|gb|EEY53522.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1372
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 170/307 (55%), Gaps = 12/307 (3%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
L A + +T SS+ + A + LV+DEAAQ E + IP++ G K VL GD
Sbjct: 880 LDTAHIVFTTLSSAGVAALDASARYDVLVVDEAAQAVELSTIIPMKF-GSKQCVLVGDPQ 938
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QL A V S+ S ++ + RSLFERL + H+L QYR HP IS FP +YFY K++D
Sbjct: 939 QLSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRNYFYGGKLQDG 998
Query: 461 STVRKRSYEKRFLH-GPMYGPYSFINVFGGREEFIEHSCR-NMVEVSVVMKILLNLYKAW 518
V+ Y K + + GP + P F N+ RE+ + R N+ E + + + L L +
Sbjct: 999 DNVKGDEYAKPYHNLGPAFMPLVFWNLLSSREKATKSVSRMNVGEAELAVNLFLTLKNSC 1058
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEK----LGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
+ +G+++PYS Q+ ++ + LG +Y V++ ++DGFQG E+D+II+
Sbjct: 1059 PPNAISGKVGMITPYSQQMDELRNRFRHALGERYEQE----VEINTVDGFQGREKDIIIL 1114
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
STVR++ +GFL++ +R+NVALTRA+ +++G TL R W AL+ A C
Sbjct: 1115 STVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTL-RSSKPWSALLDHAYNHHCI 1173
Query: 635 FNADDDK 641
+ + K
Sbjct: 1174 VHVESPK 1180
>gi|357154159|ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
distachyon]
Length = 2045
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 168/294 (57%), Gaps = 27/294 (9%)
Query: 365 LNFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
+ +VIDEAAQ E + IPLQL G K ++ GD QLPA V S ++++ + S+F
Sbjct: 1387 FDVVVIDEAAQALEPATLIPLQLLKSKGTK-CIMVGDPKQLPATVMSGLASKFLYECSMF 1445
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
ERL GY +L+ QYRMHP+IS FP+ +FYENK+ D + ++S F GPY
Sbjct: 1446 ERLQRAGYPVIMLTKQYRMHPNISRFPSLHFYENKLLDGVQMAEKSAP--FHEHNHLGPY 1503
Query: 482 SFINVFGGREE----FIEHSCRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYS 534
F ++ GRE S N E ++I L N Y A ++ IGI++PY
Sbjct: 1504 MFFDIADGRERSGTNAATQSLCNQYEADAALEILSFLKNRYPAEFSCRK---IGIITPYR 1560
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG----------S 584
+Q+ ++ + S + +++ ++DGFQG E D++++STVR++N S
Sbjct: 1561 SQLSLLRSRFTSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSSGDRHHAGEARS 1620
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
IGF+++ +R+NVALTRAR LWI+GNARTL + S W +LV +A R F + +
Sbjct: 1621 IGFVADVRRMNVALTRARFSLWIVGNARTL-QTNSHWASLVQNAKERNMFISVE 1673
Score = 47.4 bits (111), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
L S+ NDSQ QAV + K + LI GPPGTGKTKT+ ++ LL +
Sbjct: 1061 LKSSYNDSQLQAVSIAIGPTSSKMKCDLSLIQGPPGTGKTKTIVAIVSALLSL 1113
>gi|222641848|gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
Length = 2215
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 174/307 (56%), Gaps = 23/307 (7%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPAMV 406
TAS++ ++ + +VIDEAAQ E + IPLQL G K ++ GD QLPA V
Sbjct: 1606 TASANKFVNFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTK-CIMVGDPKQLPATV 1664
Query: 407 ESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR 466
S ++++ + S+FERL GY +L+ QYRMHP IS FP+ +FYENK+ D + +
Sbjct: 1665 MSGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADK 1724
Query: 467 SYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR----NMVEVSVVMKILLNLYKAWIDS 521
S HG GPY F +V GRE+ +++ N E ++IL L +
Sbjct: 1725 SAP---FHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYPSE 1781
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
IGI++PY +Q+ ++ + S + +++ ++DGFQG E D++++STVR++N
Sbjct: 1782 FSCRKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASN 1841
Query: 582 GG----------SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
SIGF+++ +R+NVALTRAR LWI+GNA+TL + S W +L+ +A R
Sbjct: 1842 SSDSRHHTGEARSIGFVADVRRMNVALTRARFSLWIVGNAKTL-QTNSHWASLLQNAKER 1900
Query: 632 QCFFNAD 638
F + +
Sbjct: 1901 NLFISVN 1907
Score = 47.0 bits (110), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
L S+ NDSQ +AV +R K + LI GPPGTGKT+T+ ++ LL +
Sbjct: 1298 LKSSYNDSQLEAVSIAIRSTSLKAKFDLSLIQGPPGTGKTRTIVAIVSALLSL 1350
>gi|426195915|gb|EKV45844.1| hypothetical protein AGABI2DRAFT_72010 [Agaricus bisporus var.
bisporus H97]
Length = 1864
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 170/302 (56%), Gaps = 17/302 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L+F +++DE+AQ E + IPL+ S + +L GD QLP V S+ +++ + +S
Sbjct: 1531 IERLDFDMIIVDESAQAIELSTLIPLKYS-CQRCILVGDPQQLPPTVLSQEASKYRYNQS 1589
Query: 420 LFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
LF R+ HLLSIQYRMHP IS P+S FY+ ++ D ++ +++ + + +
Sbjct: 1590 LFVRMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQP-WHKNAHF 1648
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQ 536
G Y F NV G EE HS +N+ E V + + L + + + +GIVS Y AQ
Sbjct: 1649 GIYKFFNVSKGLEEMSRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQ 1708
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVN 595
+ ++ + ++ V ++DGFQG E+D+II+S VR+ G ++GFLS+ +R+N
Sbjct: 1709 IAELKRQFEQRFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMN 1768
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ-----CFFNADDDK----DLGKA 646
VALTRA+ L+ILGNA TL R W +V DA R C A D K DLG++
Sbjct: 1769 VALTRAKSSLYILGNAATLERSDPNWRRIVGDARGRSRLVEVCLSPAHDSKTEFGDLGRS 1828
Query: 647 IL 648
L
Sbjct: 1829 YL 1830
Score = 43.5 bits (101), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 26/90 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-------- 79
+N+ QA A+L + LI GPPGTGKT T+ L+ + L + R
Sbjct: 1299 INEPQAIAILKSM------ATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPAVHIQIG 1352
Query: 80 ------------TLVCTPTNVAIKELAARV 97
L+C P+N AI E+A R+
Sbjct: 1353 KGPPPERPPLPKVLLCAPSNAAIDEIARRI 1382
>gi|345562914|gb|EGX45922.1| hypothetical protein AOL_s00112g111 [Arthrobotrys oligospora ATCC
24927]
Length = 1999
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 170/293 (58%), Gaps = 11/293 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY- 426
++IDEAAQ E + IP++ G K ++ GD QLP V S+ +++ + +SLF R+
Sbjct: 1536 VIIDEAAQSIELSALIPMKF-GCKKCIMVGDPKQLPPTVLSREASKFAYEQSLFVRMQKN 1594
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSF 483
S HLLSIQYRMHP+IS FP+ FY +++ D + +R + + + +GPY F
Sbjct: 1595 HPESVHLLSIQYRMHPAISSFPSEMFYNSQLEDGPDMTMLRSQPWHQSLF----FGPYRF 1650
Query: 484 INVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
NV G +E HS +N+ EV+V + I L + ++ IGI++PY Q+ A+++K
Sbjct: 1651 FNVVG-QEAMSGHSMKNIHEVNVALMIYKRLVADFPETNFSGKIGIITPYKTQLHALRQK 1709
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
Y + ++ + D FQG E ++II S VR++ +IGFLS+ +R+NV LTRAR
Sbjct: 1710 FVDTYNDQILRTIEFNTTDAFQGREREIIIFSCVRASQKSTIGFLSDIRRMNVGLTRARS 1769
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDE 656
L++LGNA TL +K W +LV +A R + + ++ L + K++++
Sbjct: 1770 SLFVLGNANTL-KKNEFWASLVENAQDRGYYTEGNFEQLLRRPCRTTMKQIEK 1821
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 36/139 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
+N QA+A++ +R LI GPPGTGKTKTV ++ LL
Sbjct: 1284 VNKPQARAIIGAVRN------DGFSLIQGPPGTGKTKTVIAVIGALLPDDKGVTISIPGS 1337
Query: 76 -------MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
+ + LVC P+N A+ EL R +KE V + D F P ++ LG R
Sbjct: 1338 KQPSSGVVSKKLLVCAPSNAAVDELVIR----LKEGVVKQSGDK-FTPA--VVRLG---R 1387
Query: 129 LKV-DSGVEEIYLDYRVKR 146
L V + V ++ L+ V++
Sbjct: 1388 LDVINQAVHDVALETLVEK 1406
>gi|414886089|tpg|DAA62103.1| TPA: hypothetical protein ZEAMMB73_701312 [Zea mays]
Length = 688
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 35/294 (11%)
Query: 365 LNFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
+ ++IDEAAQ E + IPLQ+ G K ++ GD QLPA V S ++++ + S+F
Sbjct: 62 FDVVIIDEAAQALEPATLIPLQILKSRGTK-CIMVGDPKQLPATVMSGLASKFLYECSMF 120
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
ERL GY +L+ QYRMHP IS FP+ +FYENK+ D V +S F GPY
Sbjct: 121 ERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGVEVADKSASFHFHE--CLGPY 178
Query: 482 SFINVFGGREEFIEHSCRNMVEVSV-----------VMKILLNLYKAWIDSKEKLSIGIV 530
F ++ GR EH RN S+ ++ L N Y S++ IGI+
Sbjct: 179 MFFDIADGR----EHCGRNAATQSLCNDFEADAALEILSFLNNRYPLEFTSRK---IGII 231
Query: 531 SPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG------- 583
+PY +Q+ ++ K S + +++ ++DGFQG E D++++STVR++N
Sbjct: 232 TPYRSQLSILRSKFTSSFGPEIVAEMEINTVDGFQGREVDILLLSTVRASNSSDDSHRTG 291
Query: 584 ---SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
SIGF+++ +R+NVALTRAR LWI+GNARTL R S W +LV DA R F
Sbjct: 292 EARSIGFVADVRRMNVALTRARLSLWIVGNARTL-RINSHWNSLVCDAEERNLF 344
>gi|295662663|ref|XP_002791885.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279537|gb|EEH35103.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 2130
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 191/349 (54%), Gaps = 11/349 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
NL +A DLL ++ L+ A + +T S S M S+ +E +VIDEAAQ E
Sbjct: 1491 NLVAARNADLLRRKIQQNVLEDAHVLCATLSGSGHEMFQSLDIE-FETVVIDEAAQSIEL 1549
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + HLL QY
Sbjct: 1550 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQANHPQDVHLLDTQY 1608
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPMYGPYSFINVFGGREEFIE-H 496
RMHP IS FP++ FY+ +++D + K R H ++GPY F +V G + H
Sbjct: 1609 RMHPEISRFPSAAFYDGRLQDGPDMDK--LRSRIWHKSELFGPYRFFDVQGLHSSAPKGH 1666
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ EV V MK+ L + IGI++PY Q+ ++ + +KY NS +
Sbjct: 1667 SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGNSIFTMI 1726
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+ + D FQG E ++II S VR+++ G IGFL++ +R+NV LTRA+ LW+LG++++L +
Sbjct: 1727 EFNTTDAFQGRECEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQ 1785
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
+ W L++DA+ R D L K + EL++++ + P S
Sbjct: 1786 GE-FWRGLINDAHTRNLVTQGDILGILQKPQIIPNIELNDVEMIDAPTS 1833
>gi|119467162|ref|XP_001257387.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119405539|gb|EAW15490.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 2076
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 189/344 (54%), Gaps = 15/344 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1497 NHSAARDADLNRRRIQQEIINGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1555
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ + HLL QY
Sbjct: 1556 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQANHPRDVHLLDTQY 1614
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE 495
RMHP IS +P++ FY+ K++D + +R R + + L GPY F +V G + +
Sbjct: 1615 RMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSEL----LGPYRFFDVQGLHQNTTK 1670
Query: 496 -HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF 554
HS N+ E+ V M++ L + D IGI++PY Q+ ++ + ++Y NS
Sbjct: 1671 GHSLINLAELRVAMQLYERLISDFRDYDFSGKIGIITPYKGQLRELKTQFAARYGNSIFN 1730
Query: 555 AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1731 MVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQSL 1789
Query: 615 TRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ + W L+ DA R + + D L + K++D +D
Sbjct: 1790 MQGE-FWNGLIKDARRRNVYTDGDILDILQRPQFTGYKDIDMMD 1832
Score = 44.7 bits (104), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 32/101 (31%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N +QA+A+ S L D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1293 VNPAQAKAIKSAL-----DNDA-FTLIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISR 1346
Query: 75 -------QMKFRT------LVCTPTNVAIKELAARVVKLVK 102
++ RT LVC P+N A+ EL R + VK
Sbjct: 1347 PMGVANPRVPVRTTTSKKLLVCAPSNAAVDELVMRFKEGVK 1387
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 13/351 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A DL ++ + + + +T S S M S+++E +VIDEAAQ E
Sbjct: 1495 NQAAARNADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIE-FETVVIDEAAQSIEL 1553
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + K HLL Q
Sbjct: 1554 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPKDVHLLDTQ 1611
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIE- 495
YRMHP IS FP++ FY+ +++D + K R H + GPY F +V G +
Sbjct: 1612 YRMHPEISRFPSAAFYDGRLKDGPDMAK--LRVRPWHSSELLGPYRFFDVQGLHSSAPKS 1669
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
HS N+ E+ V MK+ L ++ K IGI++PY Q+ ++ + +KY +S
Sbjct: 1670 HSLVNLAELRVAMKLYERLTIDYLTYDFKGKIGIITPYKGQLREMKNQFANKYGSSIFTT 1729
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
V+ + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1730 VEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSSLWVLGNSQSLV 1788
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESR 666
+ + W L+ DA +R + D K L + +++ EL ++ + P ++
Sbjct: 1789 QGE-FWNGLITDAQSRNLYTQGDILKLLQRPQISLDMELKDVQMIDAPSAK 1838
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 30/93 (32%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
+N +QA+AV S + D+ A LI GPPG+GKTKT+ L+ +L F
Sbjct: 1293 VNPAQAKAVRSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPG 1346
Query: 79 ---------------RTLVCTPTNVAIKELAAR 96
+ LVC P+N A+ EL R
Sbjct: 1347 SSGDFRPVTRATTCGKLLVCAPSNAAVDELVMR 1379
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 184/340 (54%), Gaps = 20/340 (5%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ ++IDEAAQ E S IPL+ + + +L GD QLP V S+ + + + RSLF RL
Sbjct: 1520 FDLVIIDEAAQAIELSSLIPLKFAS-QRCILVGDPQQLPPTVLSQTATKMGYNRSLFVRL 1578
Query: 425 S-YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYS 482
+ HLLSIQYRMHP IS P+ FYE K++D + ++ +R H G Y
Sbjct: 1579 QDSMPDRIHLLSIQYRMHPEISRLPSVLFYERKLQDGPDMAVKT--RRPWHDDSNLGVYR 1636
Query: 483 FINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYK---AWIDSKEKLSIGIVSPYSAQVV 538
++ G E+ + +S N+ EV K L LYK A + + +++IGI+S Y AQ+
Sbjct: 1637 LFDIRGNEEQADLGYSQYNLAEV----KAALELYKRLSATLRTPTEVTIGIISMYRAQLT 1692
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVA 597
+++ ++Y V ++DGFQG E+D+II+S VR+ N SIGFLS+++R+NVA
Sbjct: 1693 KLRDAFIARYGREILSKVDFNTVDGFQGQEKDVIILSCVRAGPNVSSIGFLSDARRINVA 1752
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDEL 657
+TR R L+ILG+A TL R +W ++ DAN+R D G + D
Sbjct: 1753 ITRCRSSLFILGDAATLRRSDQLWSKIIEDANSRGSLLQVHDGDPPGS-----RFSTDGY 1807
Query: 658 DELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSV 697
D P + SQR + N +N L + T+D T ++
Sbjct: 1808 DRQKYPTTSSRLSQR-EPNAPQNTLGNKSASTTDTTSAAL 1846
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 33/136 (24%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
LN QA+AVLS L H LI GPPGTGKT T+ L+ L
Sbjct: 1282 LNYPQARAVLSSL------HTRGFSLIQGPPGTGKTSTICGLVGAFLSSRDSATTSITVG 1335
Query: 76 ------MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERL 129
+ + LVC P+N AI E+A R+ + V +S + R ++ LG +
Sbjct: 1336 GPSQKPIPRKVLVCAPSNAAIDEVARRIHEGVWKSDGQRTRP-------QVVRLGPISAM 1388
Query: 130 KVDSGVEEIYLDYRVK 145
+ GV +I LD V+
Sbjct: 1389 SL--GVRDISLDRMVE 1402
>gi|255564990|ref|XP_002523488.1| conserved hypothetical protein [Ricinus communis]
gi|223537316|gb|EEF38947.1| conserved hypothetical protein [Ricinus communis]
Length = 1335
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 133/199 (66%), Gaps = 11/199 (5%)
Query: 841 ESLSLMKFYRLSSVVVSHLLSDRVGRELDLPFEVTDEQLEMILSPRSTFILGRSGTGKTT 900
+SL LMKFY +S+ ++ HLLS G E+D+PFE+TDEQ+E+I RS+FIL RSGTGKT
Sbjct: 30 DSLVLMKFYSMSTSIIRHLLSGCDGNEMDIPFELTDEQMEIIRFNRSSFILARSGTGKTA 89
Query: 901 VLTRKLFQKEELHRMAMEEFYGVNNSVTLHCSQESEAEEGLGETERPILRQLFVTVSPKL 960
L KL +KE+LH +++E F+ V + ++ S ET+ ILRQ+FVT + +L
Sbjct: 90 DLIMKLLRKEQLHHLSLEGFHEVECNSSMSVSLRK-------ETDGCILRQIFVTSNARL 142
Query: 961 CFAIKQHISQMKSSAFGGKFVAESSLIDIDDEAEFKDIPNSFADIPAESYPLVITFHKFL 1020
C +KQ SSA E D D+ EF DIP+SF+D+P SYPLVI+F+KFL
Sbjct: 143 CLFVKQSTCGWNSSAESSDHEEE----DFDEILEFSDIPDSFSDLPQSSYPLVISFNKFL 198
Query: 1021 MMLDGTLGSSYFDRFHDIR 1039
MML+GT+G S+F++F ++R
Sbjct: 199 MMLNGTVGRSFFEKFPELR 217
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 191/344 (55%), Gaps = 13/344 (3%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K++++ L + S + N +A +L ++ + A + +T S S M
Sbjct: 1400 LLKKKKAQ----LSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEM 1455
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E ++IDEAAQ E + IPL+ G +L GD QLP V SK ++ +
Sbjct: 1456 FQTLSIE-FETVIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQY 1513
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ + HLL QYRMHP IS FP++ FY+ +++D + K + + +
Sbjct: 1514 EQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRI-RPWHNT 1572
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ GPY F +V G + HS NM E+ V M++ L + + IGI++PY
Sbjct: 1573 ELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYK 1632
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
Q+ +++ +KY N+ AV+ + D FQG E ++II S VR++N G IGFL++ +R+
Sbjct: 1633 GQLRELKQHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRM 1691
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
NV LTRA+ LW+LGN+++L R + W L++DA RQ + + D
Sbjct: 1692 NVGLTRAKSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1734
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +QA+AV S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1221 LNLAQAKAVKSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPR 1274
Query: 75 -------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ + LVC P+N A+ EL R + VK R + + +L LG ++
Sbjct: 1275 PGDKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKIS-------VLRLGRSD 1327
Query: 128 RLKVDSGVEEIYLDYRV 144
+++ V ++ LD RV
Sbjct: 1328 --AINTNVLDVTLDERV 1342
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 191/344 (55%), Gaps = 13/344 (3%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K++++ L + S + N +A +L ++ + A + +T S S M
Sbjct: 1475 LLKKKKAQ----LSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEM 1530
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E ++IDEAAQ E + IPL+ G +L GD QLP V SK ++ +
Sbjct: 1531 FQTLSIE-FETVIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQY 1588
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ + HLL QYRMHP IS FP++ FY+ +++D + K + + +
Sbjct: 1589 EQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRI-RPWHNT 1647
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ GPY F +V G + HS NM E+ V M++ L + + IGI++PY
Sbjct: 1648 ELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYK 1707
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
Q+ +++ +KY N+ AV+ + D FQG E ++II S VR++N G IGFL++ +R+
Sbjct: 1708 GQLRELKQHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRM 1766
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
NV LTRA+ LW+LGN+++L R + W L++DA RQ + + D
Sbjct: 1767 NVGLTRAKSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1809
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +QA+AV S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1296 LNLAQAKAVKSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPR 1349
Query: 75 -------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ + LVC P+N A+ EL R + VK R + + +L LG ++
Sbjct: 1350 PGDKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKIS-------VLRLGRSD 1402
Query: 128 RLKVDSGVEEIYLDYRV 144
+++ V ++ LD RV
Sbjct: 1403 --AINTNVLDVTLDERV 1417
>gi|159122655|gb|EDP47776.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus A1163]
Length = 2076
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 194/355 (54%), Gaps = 18/355 (5%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1497 NHSAARDADLNRRRIQQEIINNAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1555
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ + K HLL Q
Sbjct: 1556 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA-NHPKDVHLLDTQ 1613
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP IS +P++ FY+ K++D + +R R + + L GPY F +V G +
Sbjct: 1614 YRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSEL----LGPYRFFDVQGLHQNTT 1669
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E+ V M++ L + + IGI++PY Q+ ++ + ++Y N+
Sbjct: 1670 KGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQFAARYGNAIF 1729
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1730 NMVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1788
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD-ELLNPESRL 667
L + + W L+ DA R + + D L + K +D +D E NP + L
Sbjct: 1789 LVQGE-FWNGLIKDARRRNVYTDGDILGILQRPQFTGYKNIDMMDAESPNPTASL 1842
>gi|70984729|ref|XP_747871.1| tRNA-splicing endonuclease [Aspergillus fumigatus Af293]
gi|66845498|gb|EAL85833.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus Af293]
Length = 2076
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 194/355 (54%), Gaps = 18/355 (5%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1497 NHSAARDADLNRRRIQQEIINNAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1555
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQ 437
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ + K HLL Q
Sbjct: 1556 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA-NHPKDVHLLDTQ 1613
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP IS +P++ FY+ K++D + +R R + + L GPY F +V G +
Sbjct: 1614 YRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSEL----LGPYRFFDVQGLHQNTT 1669
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ HS N+ E+ V M++ L + + IGI++PY Q+ ++ + ++Y N+
Sbjct: 1670 KGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQFAARYGNAIF 1729
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1730 NMVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1788
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD-ELLNPESRL 667
L + + W L+ DA R + + D L + K +D +D E NP + L
Sbjct: 1789 LVQGE-FWNGLIKDARRRNVYTDGDILGILQRPQFTGYKNIDMMDAESPNPTASL 1842
>gi|409079006|gb|EKM79368.1| hypothetical protein AGABI1DRAFT_91927 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1901
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 162/283 (57%), Gaps = 8/283 (2%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L+F +++DE+AQ E + IPL+ S + +L GD QLP V S+ +++ + +S
Sbjct: 1504 IERLDFDMIIVDESAQAIELSTLIPLKYS-CQRCILVGDPQQLPPTVLSQEASKYRYNQS 1562
Query: 420 LFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
LF R+ HLLSIQYRMHP IS P+S FY+ ++ D ++ +++ + + +
Sbjct: 1563 LFVRMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQP-WHKNAHF 1621
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQ 536
G Y F NV G EE HS +N+ E V + + L + + + +GIVS Y AQ
Sbjct: 1622 GIYKFFNVSKGLEEMSRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQ 1681
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVN 595
+ ++ + ++ V ++DGFQG E+D+II+S VR+ G ++GFLS+ +R+N
Sbjct: 1682 IAELKRQFEQRFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMN 1741
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
VALTRA+ L+ILGNA TL R W +V DA R AD
Sbjct: 1742 VALTRAKSSLYILGNAATLERSDPNWRKIVGDARGRSRLVEAD 1784
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 25/89 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-------- 79
+N+ QA AVL + LI GPPGTGKT T+ L+ + L + R
Sbjct: 1273 INEPQAIAVLKSM------ATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPAVPIQIG 1326
Query: 80 -----------TLVCTPTNVAIKELAARV 97
L+C P+N AI E+A R+
Sbjct: 1327 KGPTERPPLPKVLLCAPSNAAIDEIARRI 1355
>gi|407035278|gb|EKE37635.1| tRNA splicing endonuclease, putative [Entamoeba nuttalli P19]
Length = 1159
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 165/282 (58%), Gaps = 13/282 (4%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
L+T+ S L+ + E + ++IDEAAQ E + IPL+ G + +L GD QLPA V
Sbjct: 523 LNTSGSDIFLNCIK-EKIENVIIDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVI 580
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS--STVRK 465
S + + + RSLFERL G S +L IQYRMHP I FP++ FY ++ D ++
Sbjct: 581 SVAAQNSGYDRSLFERLYKCGVSVDMLKIQYRMHPLIREFPSNQFYSGELIDGRDESILP 640
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
S +K F GP F + GG EE + + N VEV +V+ +L L K + + KE
Sbjct: 641 CSIDKGF------GPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-W 693
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGS 584
IGIV+PY Q++ I+ + + + + V +IDGFQG E D+II S VRS+ S
Sbjct: 694 DIGIVTPYRQQLLLIKMAIETSLLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPS 753
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFLS+ +R+NVALTRA++ LW++GN+ TL K+ W+ +
Sbjct: 754 IGFLSDIRRMNVALTRAKNALWVIGNSNTLCTNKT-WKQYIE 794
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 39/128 (30%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSST-------------------LNDSQAQAVLSCLRQM 43
E LC++Q + PSL T N SQ + + S L
Sbjct: 242 EYLSLCTVQHLSLLKTLLKPSLKDTSPSNGIFGKYLQTMKETNIFNSSQIECINSAL--- 298
Query: 44 RCDHKATIQLIWGPPGTGKTKTVSMLLVIL-------------LQMKF-RTLVCTPTNVA 89
K LI GPPGTGKTKT+ +L + ++MK + LVC P+N A
Sbjct: 299 ---SKKGFSLIQGPPGTGKTKTLLGILGAIIFGKPASFNKQGTIKMKHSKILVCAPSNAA 355
Query: 90 IKELAARV 97
+ E+ R+
Sbjct: 356 VDEIVLRI 363
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 188/348 (54%), Gaps = 10/348 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1370 NHSAARDADLNRRKIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1428
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ S HLL IQY
Sbjct: 1429 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQSNHPRDVHLLDIQY 1487
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP IS +P + FY+ K++D + R + + + PY F +V G + + HS
Sbjct: 1488 RMHPEISAYPRNAFYDGKLQDGPDM-ARLRARPWHQSELLSPYRFFDVQGLHQSAAKGHS 1546
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
NM E+ V M++ L + IGI++PY Q+ ++ +KY N+ +
Sbjct: 1547 LVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMID 1606
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1607 FNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1665
Query: 618 KSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
+ W +L+ DA R + + D K L + K +D LD PES
Sbjct: 1666 E-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLDA-DGPES 1711
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1493 NHSAARDADLNRRKIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1551
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ S HLL IQY
Sbjct: 1552 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQSNHPRDVHLLDIQY 1610
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP IS +P + FY+ K++D + R + + + PY F +V G + + HS
Sbjct: 1611 RMHPEISAYPRNAFYDGKLQDGPDM-ARLRARPWHQSELLSPYRFFDVQGLHQSAAKGHS 1669
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
NM E+ V M++ L + IGI++PY Q+ ++ +KY N+ +
Sbjct: 1670 LVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMID 1729
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1730 FNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1788
Query: 618 KSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ W +L+ DA R + + D K L + K +D LD
Sbjct: 1789 E-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLD 1828
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1431 NHSAARDADLNRRKIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1489
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ S HLL IQY
Sbjct: 1490 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQSNHPRDVHLLDIQY 1548
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP IS +P + FY+ K++D + R + + + PY F +V G + + HS
Sbjct: 1549 RMHPEISAYPRNAFYDGKLQDGPDM-ARLRARPWHQSELLSPYRFFDVQGLHQSAAKGHS 1607
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
NM E+ V M++ L + IGI++PY Q+ ++ +KY N+ +
Sbjct: 1608 LVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMID 1667
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1668 FNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1726
Query: 618 KSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ W +L+ DA R + + D K L + K +D LD
Sbjct: 1727 E-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLD 1766
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 9/341 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1493 NHSAARDADLNRRKIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1551
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ S HLL IQY
Sbjct: 1552 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQSNHPRDVHLLDIQY 1610
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP IS +P + FY+ K++D + R + + + PY F +V G + + HS
Sbjct: 1611 RMHPEISAYPRNAFYDGKLQDGPDM-ARLRARPWHQSELLSPYRFFDVQGLHQSAAKGHS 1669
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
NM E+ V M++ L + IGI++PY Q+ ++ +KY N+ +
Sbjct: 1670 LVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMID 1729
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1730 FNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1788
Query: 618 KSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ W +L+ DA R + + D K L + K +D LD
Sbjct: 1789 E-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLD 1828
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 175/307 (57%), Gaps = 10/307 (3%)
Query: 336 LKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
L+S L A++ ST S S L S+ M + ++IDEA Q E + IPL+ G K
Sbjct: 1501 LQSKILSEANVICSTLSGSAHDFLASMNM-VFDQVIIDEACQCVELSALIPLRY-GCKKC 1558
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH--LLSIQYRMHPSISCFPNSY 451
++ GD QLP V S+V++ + +SLF R+ Y H LL IQYRMHP IS FP++
Sbjct: 1559 IMVGDPNQLPPTVLSQVASSFNYEQSLFVRMQK-KYPSHVYLLDIQYRMHPDISRFPSAE 1617
Query: 452 FYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG-REEFIEHSCRNMVEVSVVMKI 510
FY +++ D +++ + + P+ PY F N+ G ++ S N E V +++
Sbjct: 1618 FYNSRLHDGEGMKELNQREWHSDFPL-SPYRFFNITGKHKQSEYTRSLYNYSEAQVALEM 1676
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ L K ++ IGI+SPY Q+ +++ Y + + ++DGFQG E++
Sbjct: 1677 VKTLMKILPQNEFSGRIGIISPYKEQIRVLKDVFRKNYGQTILNEIDFNTVDGFQGQEKE 1736
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+II+S VR+++ G++GFLS+ +R+NVALTRAR LWILGN +L+R K+ W L+ DA
Sbjct: 1737 IIIMSCVRASDSGNVGFLSDVRRMNVALTRARTTLWILGNKESLSRNKT-WNHLLEDAKE 1795
Query: 631 RQCFFNA 637
R +A
Sbjct: 1796 RDAVTDA 1802
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 26/97 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
+N SQA A+L +Q LI GPPGTGKTKT+ ++ L
Sbjct: 1293 VNRSQASAILGTYKQ------DGFSLIQGPPGTGKTKTILGIVGYALAKSQNNSISVPTN 1346
Query: 77 ---------KFRTLVCTPTNVAIKELAARVVKLVKES 104
+ L+C P+N A+ EL R+ + VK S
Sbjct: 1347 TQGSNKQVNNSKLLICAPSNAAVDELVLRLRQGVKSS 1383
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 180/328 (54%), Gaps = 16/328 (4%)
Query: 337 KSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 396
KS + RAS+ ST S S + +++DE+ Q E S IPL + I+ +L
Sbjct: 1351 KSDSIYRASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILV 1410
Query: 397 GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENK 456
GD QLP + S S E SLFERLS + +L +QYRMHP+IS FP++ FY ++
Sbjct: 1411 GDPLQLPPTIFSTESAENGLNISLFERLSKV-LPVEMLHVQYRMHPTISRFPSNQFYRDR 1469
Query: 457 IRDSSTVRKRSYEKRFLHGPM-YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLY 515
+ D V+ Y + H + YGP F +V +EE + S +N +E+++V ++ L
Sbjct: 1470 LLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLV 1529
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ + + K K S GI++PY Q I+E+ K N ++ +IDGFQG E+D+II+S
Sbjct: 1530 QDYPECK-KFSFGIITPYKLQKSEIKEQ--HKQFNYP-LNIETSTIDGFQGSEKDIIILS 1585
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
VRS IGFLS+ +R+NVALTRA+ L+++GN++ L +K W ++
Sbjct: 1586 CVRSER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPFCQYVHSINSMV 1641
Query: 636 NADDDKDLGKAILAVKKELDELDELLNP 663
+ D K I +++++ E D LNP
Sbjct: 1642 SID-----SKGISVLEQQIQEYD-YLNP 1663
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTP 85
LN SQ ++ + L I LI GPPGTGKT T+ LL ILL + +F+ LVC P
Sbjct: 1243 LNTSQFNSIETSLST------KGITLIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGP 1296
Query: 86 TNVAIKELAARVVK 99
++ ++ E+A R K
Sbjct: 1297 SHASVDEIAKRCSK 1310
>gi|356528070|ref|XP_003532628.1| PREDICTED: probable helicase DDB_G0274399-like [Glycine max]
Length = 939
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 162/307 (52%), Gaps = 8/307 (2%)
Query: 333 EDLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIK 391
+D L++ L A++ ST S S + S + ++IDEAAQ E + +PL + K
Sbjct: 564 DDSLRAAILDEATIVFSTLSFSGSHVFSKLNRSFDVVIIDEAAQAVEPATLVPLA-NQCK 622
Query: 392 HAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSY 451
L GD QLPA V S V+ +G SLFERL GY +L QYRMHP I FP+
Sbjct: 623 KVFLVGDPAQLPATVISDVAKNHGYGTSLFERLKQAGYPVKMLKTQYRMHPEIRSFPSRE 682
Query: 452 FYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVM 508
FYE+ + D V+ R+ R H +GP+ F ++ G+E S N+ EV V+
Sbjct: 683 FYEDSLEDGDEVKSRTI--RAWHDYRCFGPFCFFDIHEGKEARPPGSGSWINVEEVDFVL 740
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGE 568
+ L + K + I+SPYS QV Q++ + SA V + ++DG QG E
Sbjct: 741 FLYQKLISLYPTLKSGNQVAIISPYSQQVKLFQKRFEETFGMSAEKVVDICTVDGCQGRE 800
Query: 569 EDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
+D+ I S VR++ IGF+ + +R+NV +TRA+ + ++G+A TL R+ W LV A
Sbjct: 801 KDIAIFSCVRASKDKGIGFVEDIRRMNVGITRAKSAVLVVGSASTL-RRSEQWNKLVESA 859
Query: 629 NARQCFF 635
R C F
Sbjct: 860 EKRNCLF 866
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 195/407 (47%), Gaps = 30/407 (7%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL--------- 346
+ YLL H V R + + V++ + D ++ RA+L
Sbjct: 658 LAYLLDNLGPNAHHVTRNQR-------IDGKVDRQMKYDQQRAIRKVRAALEASFVDDAE 710
Query: 347 --FLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
F + SSS + + ++IDEAAQ E + IP L G + VL GD QLP+
Sbjct: 711 IVFTTLTSSSRKVFRQLTHGFDTVLIDEAAQANEMATLIPF-LHGARRCVLVGDPQQLPS 769
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V SK + + F RSLFER + LG LLS+QYRMHP I FP+ FYE ++ DS+ V
Sbjct: 770 TVISKHAQQVSFQRSLFERFNELGAEALLLSVQYRMHPEIREFPSEEFYEGRLMDSACVI 829
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK 524
KR E G Y + G E +S N E +V+ + + K D +
Sbjct: 830 KRRPEPYQQKESGLGTYRIFDAHGLEERTTSNSVINHFEAILVVCLYKKIDKVLRDGTGE 889
Query: 525 LSIG---IVSPYSAQVVAIQ---EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ G +V+PY QV I+ E+L ++ V++ +IDG+QG E D+II STVR
Sbjct: 890 SAEGKVSVVTPYKEQVTVIRKAFEQLCGGEGAASRLRVQINTIDGYQGQESDVIIFSTVR 949
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK-----SVWEALVHDANARQC 633
+ G IGFLS+ +R+NVA+TRA+ L+I+G L + +VW LV +A R C
Sbjct: 950 GSGDGGIGFLSDIRRLNVAITRAKKALYIVGRVGKLRAAQAGGEFTVWRDLVQNAMDRGC 1009
Query: 634 FFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSEN 680
+ D + ++ V+++ + +L R + K EN
Sbjct: 1010 IVDDADPRVTFADVVPVEEQERAMSKLTKGNRRGVGFKPLKPRHPEN 1056
>gi|167390586|ref|XP_001739415.1| splicing endonuclease positive effector sen1 [Entamoeba dispar
SAW760]
gi|165896907|gb|EDR24206.1| splicing endonuclease positive effector sen1, putative [Entamoeba
dispar SAW760]
Length = 1156
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 164/282 (58%), Gaps = 13/282 (4%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
L+T+ S L+ V E + +++DEAAQ E + IPL+ G + +L GD QLPA V
Sbjct: 523 LNTSGSDIFLNCVK-EKIENVIVDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVI 580
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS--STVRK 465
S + + + RSLFERL G S +L IQYRMHP I FP+ FY ++ D ++
Sbjct: 581 SVAAQNSGYDRSLFERLYKCGVSVDMLKIQYRMHPLIREFPSKQFYSGELIDGRDESILP 640
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
S +K F GP F + GG EE + + N VEV +V+ +L L K + + KE
Sbjct: 641 CSIDKGF------GPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-W 693
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGS 584
IGIV+PY Q++ I+ + S + + V +IDGFQG E D+II S VRS+ S
Sbjct: 694 DIGIVTPYRQQLLLIKIAIESSPLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPS 753
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFLS+ +R+NVALTRA++ LW++GN+ TL K+ W+ +
Sbjct: 754 IGFLSDIRRMNVALTRAKNALWVIGNSNTLCTNKT-WKQYIE 794
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 9 SMQSEGVWNETFGPSL-----SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKT 63
S++ N FG L ++ N SQ + + S L K LI GPPGTGKT
Sbjct: 262 SLKDTSPSNGIFGKYLQTMKETNIFNSSQIECINSAL------SKKGFSLIQGPPGTGKT 315
Query: 64 KTVSMLLVILL-------------QMKF-RTLVCTPTNVAIKELAARV 97
KT+ +L ++ +MK + LVC P+N A+ E+ R+
Sbjct: 316 KTLLGILGAIIFGKPASINKQGTVKMKHSKILVCAPSNAAVDEIVLRI 363
>gi|294909689|ref|XP_002777827.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239885789|gb|EER09622.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 959
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 162/275 (58%), Gaps = 6/275 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ +V+DEA+Q E + IPLQ+ G + VL GD QLPA V S + +G+SLF+RL
Sbjct: 547 FDTVVVDEASQGVEMGTLIPLQM-GCQRMVLVGDPKQLPATVFSATAERFGYGKSLFQRL 605
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+ +LLS Q+RMHP+I+ FP++ FY+ ++++ + + ++ + H P++GP SF
Sbjct: 606 QQSDFQVNLLSTQFRMHPAIAEFPSNEFYDGGVKNAENIMELVGDQPWSHIPIFGPVSFF 665
Query: 485 NVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
NV G+EE S N E + ++ I L W + + ++SPY+ QV I++K
Sbjct: 666 NV-PGQEEKSYTSLTNEAEANFIIHIFKMLQVCWPKEPWREKLAVISPYAEQVRLIRQKF 724
Query: 545 GSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRA 601
Y V S V+V ++DGFQG E+D +++STVR++ + S+GF+ + +R+NV+LTR
Sbjct: 725 RQLYNMVESKVCPVEVNTVDGFQGREKDCVVVSTVRADPDATSVGFVRDVRRMNVSLTRG 784
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
R LW+ G+ R L+ W++ + + FN
Sbjct: 785 RTNLWVCGHQRMLSNNPH-WKSFIVKQQKAKRLFN 818
>gi|67903368|ref|XP_681940.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
gi|40740903|gb|EAA60093.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
Length = 2234
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 180/321 (56%), Gaps = 9/321 (2%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ + A + +T S S M ++++E +VIDEAAQ E
Sbjct: 1496 NHSAARDADLNRRRIQQEIIDGAHVICATLSGSGHEMFQNLSIE-FETVVIDEAAQSIEL 1554
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ S HLL IQY
Sbjct: 1555 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKYQYEQSLFVRMQSNHPNDVHLLDIQY 1613
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HS 497
RMHP+IS FP + FY+ +++D + R + + + PY F +V G + + HS
Sbjct: 1614 RMHPAISMFPRTAFYDGRLQDGPDM-ARLRTRPWHQSELLSPYRFFDVQGLHQSAPKGHS 1672
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
N E+ V M++ L K + + +GI++PY Q+ ++ + +KY N+ +
Sbjct: 1673 LVNFAELKVAMQLYERLLKDFKEYDFSGKVGIITPYKGQLRELKTQFANKYGNAIFNMID 1732
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L +
Sbjct: 1733 FNTTDAFQGREAEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQG 1791
Query: 618 KSVWEALVHDANARQCFFNAD 638
+ W +LV DA R + + D
Sbjct: 1792 E-FWRSLVTDARQRNVYTDGD 1811
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 9/292 (3%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S M ++++E ++IDEAAQ E + IPL+ G +L GD QLP V SK
Sbjct: 1524 SGSGHEMFQTLSIE-FETVIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSK 1581
Query: 410 VSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
++ + +SLF R+ + HLL QYRMHP IS FP++ FY+ +++D ++ K
Sbjct: 1582 EASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAK--L 1639
Query: 469 EKRFLHGP-MYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
R H + GPY F +V G + HS NM E+ V M++ L + +
Sbjct: 1640 RIRPWHSTELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGK 1699
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
IGI++PY Q+ +++ +KY N+ AV+ + D FQG E ++II S VR++N G IG
Sbjct: 1700 IGIITPYKGQLRELKQHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IG 1758
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
FL++ +R+NV LTRA+ LW+LGN+++L R + W L++DA RQ + + D
Sbjct: 1759 FLADIRRMNVGLTRAKSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1809
Score = 47.4 bits (111), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +QA+AV S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1296 LNLAQAKAVKSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPR 1349
Query: 75 -------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ + LVC P+N A+ EL R + VK R + + +L LG ++
Sbjct: 1350 PGDKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKIS-------VLRLGRSD 1402
Query: 128 RLKVDSGVEEIYLDYRV 144
+++ V ++ LD RV
Sbjct: 1403 --AINTNVLDVTLDERV 1417
>gi|121704136|ref|XP_001270332.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398476|gb|EAW08906.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 2137
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 189/344 (54%), Gaps = 15/344 (4%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
N +A + DL ++ ++ A + +T S S M ++++E ++IDEAAQ E
Sbjct: 1495 NHSAARDADLNRRRIQQEIIEGAHIICATLSGSGHEMFQNLSIE-FETVIIDEAAQSIEL 1553
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV+++ + +SLF R+ + HLL QY
Sbjct: 1554 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQANHPRDVHLLDTQY 1612
Query: 439 RMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE 495
RMHP IS +P++ FY+ K+RD + +R R + + L PY F +V G + +
Sbjct: 1613 RMHPEISAYPSAAFYDGKLRDGPNMAQLRARPWHQSEL----LSPYRFFDVQGLHQNTTK 1668
Query: 496 -HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF 554
HS N+ E+ V M++ + + D IGI++PY Q+ ++ + ++Y NS
Sbjct: 1669 GHSLINLAELRVAMQLYERITTDFRDYDFSGKIGIITPYKGQLRELKTQFAARYGNSIFN 1728
Query: 555 AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
V + D FQG E ++II S VR++N G IGFLS+ +R+NV LTRA+ LW+LGN+++L
Sbjct: 1729 KVDFNTTDAFQGRESEIIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSSLWVLGNSQSL 1787
Query: 615 TRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
+ + W L+ D+ R + + D + L + K +D +D
Sbjct: 1788 VQGE-FWNGLIKDSRRRNVYTSGDILEILQRPQFTGYKNVDMMD 1830
>gi|390603202|gb|EIN12594.1| hypothetical protein PUNSTDRAFT_118369 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1879
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 177/314 (56%), Gaps = 24/314 (7%)
Query: 337 KSFCLKRASLFLSTASSSYMLHSV--AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
++ L+ A + ST S + H V A+E ++ ++IDEAAQ E + IPL+ K V
Sbjct: 1445 RTEVLQEADVICSTLSGAG--HDVLEALE-IDLVIIDEAAQAIELSTLIPLKYP-CKRCV 1500
Query: 395 LFGDECQLPAMVESKVSNEAC---FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNS 450
+ GD QLP V +S EAC + +SLF RL + HLLSIQYRMHP IS P+
Sbjct: 1501 MVGDPQQLPPTV---LSQEACKYQYNQSLFVRLLKDQPEAIHLLSIQYRMHPEISRLPSQ 1557
Query: 451 YFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMK 509
FY+ +++D + +++ + H +GPY F NV G+EE S N E V +
Sbjct: 1558 IFYDGRLQDGPDMAEKTKQPWHRHA-KFGPYRFFNVNRGQEEPGRAKSLMNKAECQVAVA 1616
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVV----AIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+ L + + +G+VS Y AQ+ A +++ G++ V F ++DGFQ
Sbjct: 1617 LYTRLRREFSSIDLDFRVGVVSMYRAQIFEMRRAFEQRFGAEIVGKVDFN----TVDGFQ 1672
Query: 566 GGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
G E+D+II+S VR+ N S+GFLS+++R+NVALTRAR L++LG++ TL W +
Sbjct: 1673 GQEKDVIILSCVRAGANLHSVGFLSDTRRMNVALTRARSSLFVLGHSPTLENGDKTWSKI 1732
Query: 625 VHDANARQCFFNAD 638
V+DA +R C + D
Sbjct: 1733 VNDARSRSCHIDVD 1746
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 36/140 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
LN+ QA+AVLS LR + LI GPPGTGKT T+ L+ L +
Sbjct: 1228 LNEPQAKAVLSSLR------AESFSLIQGPPGTGKTSTICGLVQAYLASRRKPATNIQAG 1281
Query: 79 ------------RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
+ LVC P+N AI E+A+R+ + + S +R + ++ +G +
Sbjct: 1282 RATAASDTAPVKKVLVCAPSNAAIDEVASRLKEGLSGSGKRGIQP-------KVVRVGAD 1334
Query: 127 ERLKVDSGVEEIYLDYRVKR 146
+ L + V++I LD V++
Sbjct: 1335 KALNI--SVKDIALDALVEQ 1352
>gi|449298811|gb|EMC94826.1| hypothetical protein BAUCODRAFT_93353, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1803
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 171/316 (54%), Gaps = 10/316 (3%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
E +L + L A + +T S S M S+ +E ++IDEAAQ E S IPL
Sbjct: 1487 EAELSRKRAQQAVLDEAHVICATLSGSGHDMFQSLNIE-FETVIIDEAAQCVEMSSLIPL 1545
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSI 444
+ IK ++ GD QLP V SK + + + +SLF R+ + HLL QYRMHP I
Sbjct: 1546 KYGCIK-CIMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQNNHPEQVHLLDTQYRMHPDI 1604
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIE-HSCRNMV 502
S FP+ FY+ ++D + + S +R H + PY F +V G + + HS N+
Sbjct: 1605 SVFPSRTFYDGLLKDGTGMA--SLRQRPWHASAVLAPYRFFDVHGQHQSAPKGHSLVNIA 1662
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
EV + M + L + + IGI++PY +Q+ ++++ ++ N+ V+ + D
Sbjct: 1663 EVEIAMALYERLISDFKGYEYNGRIGIITPYKSQLRMLRDRFSQRFGNTISDVVEFNTTD 1722
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
FQG E ++II S VR++ G IGFL + +R+NV LTRA+ LW+LGN+ +L+R + W
Sbjct: 1723 AFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSDSLSRGQ-YWR 1781
Query: 623 ALVHDANARQCFFNAD 638
LV DA AR + D
Sbjct: 1782 KLVEDARARDAYITGD 1797
>gi|212723756|ref|NP_001131829.1| uncharacterized protein LOC100193203 [Zea mays]
gi|194692656|gb|ACF80412.1| unknown [Zea mays]
Length = 346
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 193/361 (53%), Gaps = 49/361 (13%)
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
RT+ C PTN A+ E+A+RV+ +++ES FF GD++L GN +R+ VD +E I
Sbjct: 7 RTVTCAPTNTAVAEVASRVLGVIEESSGGGAATKCFF--GDVVLFGNEDRMAVDRKLENI 64
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTY-----------------IDN 181
+LD RV+RL C P+TGW+ +SM+ ++ + Y Y + N
Sbjct: 65 FLDTRVRRLRQCLMPITGWTKSLSSMIALQEDSMVPYERYDEAIQGCVLDLVSEEIKLRN 124
Query: 182 ESM---------KQSEDINGDIIKEKECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSC 232
++ K+ +++ D++ E K+A + E F + + +K +A LR+C
Sbjct: 125 VTVVCSLRTMDDKKVKEMQKDLL---EVQKKAREVEREKMSFETYFQSNYKKLAKDLRTC 181
Query: 233 IFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKS 292
+ F +P+ ++NF MA ++ LLD+F L + SE +E+L + L K
Sbjct: 182 VETFVDDLPRSATSEENFCCMAEVLLLLDAFGVL-----VQSEPVEQL------QALFKR 230
Query: 293 IVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS 352
+++ L + S C LRKL + LP + + DL F L+ A + L TAS
Sbjct: 231 HSDVRFRLREAISSC---LRKLWLLSSNFKLPEMYDSRTI-DL--EFLLQNAKIVLCTAS 284
Query: 353 SSY-MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVS 411
SSY +L+ +PL V+DEAAQLKE ES IPLQL G++HAVL DE LPA+V+SK++
Sbjct: 285 SSYRLLYMQKAQPLEVPVVDEAAQLKECESLIPLQLPGVRHAVLIDDEYLLPALVKSKLN 344
Query: 412 N 412
+
Sbjct: 345 S 345
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 25/381 (6%)
Query: 261 DSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
D+ L D+L S+E++EL S + ++ +G + L + R + R+++
Sbjct: 1437 DNLRRKLQTDSLSSKEIDELESALREINKKRTELGKQLDLQRERVSIAYRTREIERR--- 1493
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKE 378
+ +L D A + ST S S L ++ + + +VIDEA Q E
Sbjct: 1494 -----NAQAKILND---------AQIICSTLSGSAHDFLANMGIT-FDQVVIDEACQCVE 1538
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSKHLLSIQ 437
S IPL+ G K ++ GD QLP V S+ + + +SLF R+ S +LL +Q
Sbjct: 1539 LSSIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQQNNPNSVYLLDVQ 1597
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEH 496
YRMHP IS FP++ FY+++++D + ++ P+ PY F ++ + +
Sbjct: 1598 YRMHPQISAFPSAQFYQSRLKDGEGMAAKNERPWHSQYPL-SPYRFFDIVSRHQRNELSR 1656
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N E V ++++ L + + IGI+SPY Q+ +++ KY S +
Sbjct: 1657 SLFNTGEARVALELVEKLMTLLPEDQFSGRIGIISPYKEQIKTLRDVFIKKYGYSITTQI 1716
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
++DGFQG E+++II+S VR+++ G++GFLS+ +R+NVALTRAR LWILGN +L R
Sbjct: 1717 DFNTVDGFQGQEKEIIIMSCVRASDNGNVGFLSDVRRMNVALTRARTTLWILGNKESLMR 1776
Query: 617 KKSVWEALVHDANARQCFFNA 637
K +W L+ DA R C A
Sbjct: 1777 NK-IWNKLLTDATDRNCVSQA 1796
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 29/100 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N SQA+A++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1282 VNKSQAKAIIGSY------NSEGFSLIQGPPGTGKTKTILGIVGYSLSQQVDEKIIIKID 1335
Query: 75 ----------QMKFRTLVCTPTNVAIKELAARVVKLVKES 104
+ K + L+C P+N A+ EL R+ V+ S
Sbjct: 1336 QGNGNVISGNEKKPKVLICAPSNAAVDELVVRLRDGVRNS 1375
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 175/301 (58%), Gaps = 8/301 (2%)
Query: 341 LKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L +A + ST S S L S++++ + +++DEA Q E + IPL+ G + ++ GD
Sbjct: 1474 LSQAQVICSTLSGSAHDFLASLSLK-FDKVIVDEACQCVELSAIIPLRY-GCRTCIMVGD 1531
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S+ + + +SLF R+ S +LL +QYRMHP IS FP++ FY +K+
Sbjct: 1532 PNQLPPTVLSQAAASYNYEQSLFVRMQKNHPDSVYLLDVQYRMHPQISQFPSAEFYNSKL 1591
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYK 516
+D + +++ ++ + P PY F ++ E + S N+ E V ++++ L
Sbjct: 1592 KDGEGMLEKN-DRPWHKDPPLTPYRFFDIVSKHERDDQSRSLFNVEEARVALELVQKLMT 1650
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
K + IGI+SPY Q+ +I+ + +Y + + ++DGFQG E+++II+S
Sbjct: 1651 ILPQDKFRGRIGIISPYKEQIRSIKNEFIRRYGRAIQDDIDFNTVDGFQGQEKEIIIMSC 1710
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VR++ G++GFLS+ +R+NVALTRAR LWILGN +L+R +VW L+ DA+ R C
Sbjct: 1711 VRASPSGNVGFLSDVRRMNVALTRARTTLWILGNKDSLSR-NNVWRRLLEDASNRDCISK 1769
Query: 637 A 637
A
Sbjct: 1770 A 1770
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 24/94 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT-IQLIWGPPGTGKTKTVSMLLVILLQMK--------- 77
LN SQA+A+L H++ LI GPPGTGKTKT+ ++ L K
Sbjct: 1265 LNVSQAKAILGT-------HQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKILDIPG 1317
Query: 78 -------FRTLVCTPTNVAIKELAARVVKLVKES 104
+ L+C P+N A+ EL R+ VK S
Sbjct: 1318 HTPTTDPAKILICAPSNAAVDELVLRLRDGVKNS 1351
>gi|357163474|ref|XP_003579743.1| PREDICTED: probable helicase DDB_G0274399-like isoform 3
[Brachypodium distachyon]
Length = 780
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ E + +PL + G +
Sbjct: 410 DRIRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQAVEPATLVPL-VHGCRQ 468
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 469 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 528
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + K KR H +GP+ F ++ G + S N EV + I
Sbjct: 529 YEGILQDGEGLNK----KRPWHSYSCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLI 584
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K + ++SPYS QV ++++ S + + + + V ++DGFQG E++
Sbjct: 585 YHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKE 644
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N +IGF+S+ +R+NVA+TRAR + ++G+A TL + K W LV A
Sbjct: 645 VVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLVIGSASTLKQDKH-WNNLVESAKE 703
Query: 631 RQCFFN 636
R FF
Sbjct: 704 RDRFFT 709
>gi|357163471|ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
[Brachypodium distachyon]
Length = 820
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 166/306 (54%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ E + +PL + G +
Sbjct: 450 DRIRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQAVEPATLVPL-VHGCRQ 508
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 509 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 568
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + K KR H +GP+ F ++ G + S N EV + I
Sbjct: 569 YEGILQDGEGLNK----KRPWHSYSCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLI 624
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K + ++SPYS QV ++++ S + + + + V ++DGFQG E++
Sbjct: 625 YHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKE 684
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N +IGF+S+ +R+NVA+TRAR + ++G+A TL + K W LV A
Sbjct: 685 VVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLVIGSASTLKQDKH-WNNLVESAKE 743
Query: 631 RQCFFN 636
R FF
Sbjct: 744 RDRFFT 749
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 9/292 (3%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S M ++++E ++IDEAAQ E + IPL+ G +L GD QLP V SK
Sbjct: 469 SGSGHEMFQTLSIE-FETVIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSK 526
Query: 410 VSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
++ + +SLF R+ + HLL QYRMHP IS FP++ FY+ +++D ++ K
Sbjct: 527 EASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAK--L 584
Query: 469 EKRFLHGP-MYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
R H + GPY F +V G + HS NM E+ V M++ L + +
Sbjct: 585 RIRPWHSTELLGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGK 644
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
IGI++PY Q+ +++ +KY N+ AV+ + D FQG E ++II S VR++N G IG
Sbjct: 645 IGIITPYKGQLRELKQHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IG 703
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
FL++ +R+NV LTRA+ LW+LGN+++L R + W L++DA RQ + + D
Sbjct: 704 FLADIRRMNVGLTRAKSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 754
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +QA+AV S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 241 LNLAQAKAVKSAM-----DNDA-FTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPR 294
Query: 75 -------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ + LVC P+N A+ EL R + VK R + + +L LG ++
Sbjct: 295 PGDKTARTLAKKLLVCAPSNAAVDELVMRFKEGVKTLQGRAQKIS-------VLRLGRSD 347
Query: 128 RLKVDSGVEEIYLDYRV 144
+++ V ++ LD RV
Sbjct: 348 --AINTNVLDVTLDERV 362
>gi|9954728|gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
[Arabidopsis thaliana]
Length = 2142
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 232/472 (49%), Gaps = 62/472 (13%)
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG---LSKSIVGIKYL-LHK 302
+ N + I+ ++ + +++L +++ E H+ D+ +S + +GI+ L++
Sbjct: 1390 RSNLEKVVDQITHFEAKRANINQESLDAKDKPENEHHNKDDDGKLMSDAELGIRLRRLYE 1449
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASS-SYMLHSVA 361
++ + + L +Q+ + N E L+ L+ LK A + ++T S L+SV
Sbjct: 1450 QKRKIYKDLSAVQAQERKANY----EMRTLKQKLRKSILKEAQIVVTTLSGCGGDLYSVC 1505
Query: 362 MEPL--------------NFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPA 404
E L + +VIDEAAQ E + IPLQL G K ++ GD QLPA
Sbjct: 1506 AESLAAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPKQLPA 1564
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V S V+++ + S+FERL GY +L+ QYRMHP I FP+ +FY+NK+ + +
Sbjct: 1565 TVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMS 1624
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK 522
+S F GPY F ++ G+E S N E +++L K +
Sbjct: 1625 SKSAP--FHENHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEF 1682
Query: 523 EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-- 580
IGI++PY Q+ ++ + + +++ ++DGFQG E D++++STVR+
Sbjct: 1683 VAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHS 1742
Query: 581 -----NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
N IGF+++ +R+NVALTRA+ LW+LGN RTL R + W ALV DA R+
Sbjct: 1743 APDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREV-- 1799
Query: 636 NADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRK 687
I+ VK+ P + +F + N SEN K+F K
Sbjct: 1800 -----------IIPVKR----------PYNYMFGENVMEQNHSENLPKNFPK 1830
Score = 40.8 bits (94), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL 74
L S+ N+SQ QA+ + I LI GPPGTGKT+T+ ++ LL
Sbjct: 1193 LKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGLL 1243
>gi|226500364|ref|NP_001146818.1| uncharacterized protein LOC100280423 [Zea mays]
gi|219888873|gb|ACL54811.1| unknown [Zea mays]
Length = 399
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 165/306 (53%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ E + IPL + G +
Sbjct: 27 DRIRASILDEAAIVFSTLSFSGSSIFSRMTRAFDVVIIDEAAQAVEPATLIPL-IHGCRQ 85
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S+ + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 86 IFLVGDPVQLPATVISQTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISTFPSKEF 145
Query: 453 YENKIRDSSTV-RKRSYEKRFLHGPMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + RKR + +GP+ F +V G + S N EV + +
Sbjct: 146 YEGVLQDGEGLSRKRPWHSY----SCFGPFCFFDVDGIESQPSGSGSWVNQDEVEFITLL 201
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K +G++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 202 YHQLALRYPELKSSPEVGVISPYRHQVKLLKDSFRSTFGDQSRELIDVSTVDGFQGREKE 261
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRA+ + ++G+A TL + K W LV A
Sbjct: 262 IVIFSCVRCNKEQKIGFVSDFRRMNVAITRAKSAVLVVGSASTLKQDKH-WNNLVESAKE 320
Query: 631 RQCFFN 636
R C F
Sbjct: 321 RNCLFK 326
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 180/344 (52%), Gaps = 10/344 (2%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--M 356
++H RR + R +E N + E++L + L +A + +T S S M
Sbjct: 1468 IVHVRRRKAELGARIDNVKDSERN--AGREQELNRKRAQQAVLDQAHVICATLSGSGHDM 1525
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
S+ +E +VIDEAAQ E S IPL+ IK ++ GD QLP V SK + + +
Sbjct: 1526 FQSLNIE-FETVVIDEAAQCVEMSSLIPLKYGCIK-CIMVGDPKQLPPTVFSKEAAKFQY 1583
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ + HLL QYRMHP IS FP+ FY+ ++D ++ K + +
Sbjct: 1584 EQSLFVRMQNNFPDEVHLLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQP-WHKS 1642
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ PY F +V G E + HS N E+++ + L + D IGI++PY
Sbjct: 1643 ALLAPYRFFDVAGQHESAPKGHSLVNRAEIAIAELLYDRLRADFPDYDFTSKIGIITPYK 1702
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+Q+ ++ + SKY ++ + D FQG E ++II S VR++ G IGFL + +R+
Sbjct: 1703 SQLRELKNRFASKYGQQIFDFIEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRM 1762
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
NV LTRA+ LW+LGN+ +L R + W+ LV DA R C + D
Sbjct: 1763 NVGLTRAKSSLWVLGNSESLMRGQ-YWKRLVEDARERDCLTSGD 1805
>gi|226287635|gb|EEH43148.1| DEAD-box type RNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 2162
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 191/349 (54%), Gaps = 11/349 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
NL +A DLL ++ L+ A + +T S S M S+ +E ++IDEAAQ E
Sbjct: 1511 NLVAARNADLLRRKIQQNILEDAHVLCATLSGSGHEMFQSLDIE-FETVIIDEAAQSIEL 1569
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + HLL QY
Sbjct: 1570 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQANHPQDVHLLDTQY 1628
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPMYGPYSFINVFGGREEFIE-H 496
RMHP IS FP++ FY+ +++D + K R H + GPY F +V G + H
Sbjct: 1629 RMHPEISRFPSAAFYDGRLQDGPDMDK--LRSRIWHKSELLGPYRFFDVQGLHSSAPKGH 1686
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ EV V MK+ L + IGI++PY Q+ ++ + +KY +S +
Sbjct: 1687 SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSIFTMI 1746
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+ + D FQG E ++II S VR+++ G IGFL++ +R+NV LTRA+ LW+LG++++L +
Sbjct: 1747 EFNTTDAFQGRECEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQ 1805
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
+ W L++DA+ R+ D L K + EL++++ + P S
Sbjct: 1806 GE-FWRGLINDAHTRKLVTQGDILGILQKPQIIPDIELNDVEMIDAPRS 1853
>gi|67484740|ref|XP_657590.1| tRNA splicing endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474851|gb|EAL52205.1| tRNA splicing endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709011|gb|EMD48361.1| splicing endonuclease positive effector sen1, putative [Entamoeba
histolytica KU27]
Length = 1140
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 164/282 (58%), Gaps = 13/282 (4%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
L+T+ S L+ + E + ++IDEAAQ E + IPL+ G + +L GD QLPA V
Sbjct: 523 LNTSGSDIFLNCIK-EKIENVIIDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVI 580
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS--STVRK 465
S + + + RSLFERL G +L IQYRMHP I FP++ FY ++ D ++
Sbjct: 581 SVAAQNSGYDRSLFERLYKCGVFVDMLKIQYRMHPLIREFPSNQFYSGELIDGRDESILP 640
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
S +K F GP F + GG EE + + N VEV +V+ +L L K + + KE
Sbjct: 641 CSIDKGF------GPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-W 693
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGS 584
IGIV+PY Q++ I+ + + + + V +IDGFQG E D+II S VRS+ S
Sbjct: 694 DIGIVTPYRQQLLLIKMAIETSLLLKDMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPS 753
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFLS+ +R+NVALTRA++ LW++GN+ TL K+ W+ +
Sbjct: 754 IGFLSDIRRMNVALTRAKNALWVIGNSNTLCTNKT-WKQYIE 794
Score = 46.2 bits (108), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 39/128 (30%)
Query: 3 ETCELCSMQSEGVWNETFGPSLSST-------------------LNDSQAQAVLSCLRQM 43
E LC++Q + PSL T N SQ + + S L
Sbjct: 242 EYLSLCTVQHLSLLKTLLKPSLKDTSPSNGIFGKYLQTMKETNIFNSSQIECINSAL--- 298
Query: 44 RCDHKATIQLIWGPPGTGKTKTVSMLLVIL-------------LQMKF-RTLVCTPTNVA 89
K LI GPPGTGKTKT+ +L + ++MK + LVC P+N A
Sbjct: 299 ---SKKGFSLIQGPPGTGKTKTLLGILGAIIFGKPVSFNKQGTIKMKHSKILVCAPSNAA 355
Query: 90 IKELAARV 97
+ E+ R+
Sbjct: 356 VDEIVLRI 363
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 179/304 (58%), Gaps = 19/304 (6%)
Query: 341 LKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L + + ST S S +L S+ ++ + ++IDEA Q E S IPL+ G K ++ GD
Sbjct: 1553 LAESDIICSTLSGSAHDVLASLGVK-FDTIIIDEACQCTELSSIIPLRYGG-KRCIMVGD 1610
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLP V S +++ + +SLF R+ S +LL +QYRMHP+IS FP+ FY+ K++
Sbjct: 1611 PNQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQ 1669
Query: 459 DSSTVRK---RSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLN 513
D S+V++ R + K++ +GPY F ++ G+++ S N E V ++++ N
Sbjct: 1670 DGSSVQEVNTRDWHKKY----PFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVEN 1725
Query: 514 LYKAWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
L + +SK + IGI+SPY Q+ ++ + + + + +IDGFQG E+D+
Sbjct: 1726 LLATY-ESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDI 1784
Query: 572 IIISTVRS-NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
IIIS VR+ +N S+GFL + +R+NVALTRA+ LWILG+ ++L K +W+ L+ DA
Sbjct: 1785 IIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNK-LWKHLISDAKE 1843
Query: 631 RQCF 634
R C
Sbjct: 1844 RNCL 1847
>gi|449533284|ref|XP_004173606.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
isoform 1 [Cucumis sativus]
Length = 176
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 9/149 (6%)
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
++ A +DSK K+SIG+VSPYSAQVV IQ K+G KY N GF VKV S+DGFQGGEED+II
Sbjct: 1 MFVACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGEEDIII 59
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
ISTV N G SIGFLS+++R NVALTRAR+CLWILGN +TL++ SVWE LV DA R C
Sbjct: 60 ISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKSNSVWEELVMDAKNRGC 119
Query: 634 FFNADDDKDLGKAILAVKKELDELDELLN 662
FFNA+ + A+ K++ ++ LL+
Sbjct: 120 FFNANAN--------AITKDIQQIVPLLD 140
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 167/299 (55%), Gaps = 20/299 (6%)
Query: 341 LKRASLFLSTASS--SYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L RA + L T SS S + S + +IDEA Q E + IPL+L G+K VL GD
Sbjct: 343 LGRARVVLGTLSSFGSSTITSNFVARDATCIIDEACQAIEPSALIPLKLRGVKRLVLVGD 402
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLPA V S + + RSLFERL G+ HLL QYRM P I+ F + FY+ +++
Sbjct: 403 PQQLPATVVSMEAKALRYERSLFERLIGAGWKAHLLDEQYRMLPEIANFASKEFYDGRLK 462
Query: 459 DSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAW 518
+ + R S L P+ P F++ G E+ S N E +V K++ +
Sbjct: 463 TAESCRFPSS----LGQPLR-PLLFLDSRLGSEQRGGTSLVNTEEAIIVGKMVEAV---- 513
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ KLS+G+V+PY Q + I+ + V+ +G +V ++D +QG E+D+II+S VR
Sbjct: 514 --ANRKLSVGVVTPYRQQALLIR-----RTVSMSG--AEVDTVDAYQGQEKDIIIMSCVR 564
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
SN G IGF+++ +R+NV+LTRA++ LWI+GNA +L R VW L+H + +A
Sbjct: 565 SNRDGGIGFVADYRRLNVSLTRAKYALWIVGNAESLGRSSKVWADLIHYCQEHESLVDA 623
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 23 SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLV 82
++ LN +Q +AV S D + I L+ GPPGTGKTKT+ ++ LL+ ++
Sbjct: 150 TVQGDLNQAQLRAVTSA-----ADVSSPITLVQGPPGTGKTKTIVAMVKALLKTTNTLVI 204
Query: 83 CTPTNVAIKELAARVV 98
C P+N A+ ELA+R++
Sbjct: 205 CAPSNAAVDELASRIM 220
>gi|326488401|dbj|BAJ93869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 165/315 (52%), Gaps = 13/315 (4%)
Query: 324 PSAVEKDLLEDLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESEST 382
P A E+D L ++ L A++ ST S S + + + ++IDEAAQ E +
Sbjct: 452 PGAGERDRL----RASLLDEAAIVFSTLSFSGSAIFTRMTRAFDVVIIDEAAQAIEPATL 507
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHP 442
+PL + G + L GD QLPA V S + + +GRSLF+R G+ +L IQYRMHP
Sbjct: 508 VPL-VHGCRQVFLVGDPVQLPATVISTTARKLGYGRSLFQRFQAAGFPVQMLKIQYRMHP 566
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRN 500
IS FP+ FYE + D + K KR H +GP+ F +V G S N
Sbjct: 567 EISVFPSKEFYEGILEDGEGLDK----KRPWHSYSCFGPFCFFDVDGVESHLSGSGSMVN 622
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
EV + + L + + K + ++SPY QV + + S + + + + V +
Sbjct: 623 EDEVEFITLLYHQLATRYPELKSSSQVAVISPYRGQVKLLTDHFRSTFGDQSKEVIDVNT 682
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
+DGFQG E++L+I S VR N SIGF+S+ +R+NVA+TRAR + ++G++ T + K
Sbjct: 683 VDGFQGREKELVIFSCVRCNKEQSIGFVSDFRRMNVAITRARSAVLVIGSSSTFKKDKH- 741
Query: 621 WEALVHDANARQCFF 635
W LV A R +F
Sbjct: 742 WTNLVESAKERNRYF 756
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 180/313 (57%), Gaps = 8/313 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
K++ L++ L + + ST S S L +++M+ + ++IDEA Q E + IPL+
Sbjct: 1517 KEIERRQLQAKILNSSQIICSTLSGSAHDFLANMSMK-FDQVIIDEACQSVELSAIIPLR 1575
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL-GYSKHLLSIQYRMHPSIS 445
G K ++ GD QLP V S+ + + +SLF R+ + S +LL +QYRMHP+IS
Sbjct: 1576 Y-GCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQKMYPESVYLLDVQYRMHPAIS 1634
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEV 504
FP+S FY +++ D + ++ P+ PY F ++ G ++ + S N E
Sbjct: 1635 KFPSSEFYFSRLHDGEGMAAKNSRPWHKDYPL-SPYMFFDIVGKHQQNELSRSLFNYAEA 1693
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
V ++++ L + ++ IGI+SPY Q+ +++ KY +S + ++DGF
Sbjct: 1694 QVALELVDKLIQILPQTEFSGRIGIISPYKEQIRTLKDVFKRKYGHSILSEIDFNTVDGF 1753
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E+++II+S VR++ G++GFLS+ +R+NVALTRAR LWILGN ++L+R +VW+ L
Sbjct: 1754 QGQEKEIIIMSCVRASESGNVGFLSDVRRMNVALTRARTSLWILGNKKSLSR-NTVWKRL 1812
Query: 625 VHDANARQCFFNA 637
+ DA R A
Sbjct: 1813 LDDAAERNAVSEA 1825
>gi|334182633|ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
gi|332191377|gb|AEE29498.1| hydrolase domain-containing protein [Arabidopsis thaliana]
Length = 2127
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 232/472 (49%), Gaps = 62/472 (13%)
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG---LSKSIVGIKYL-LHK 302
+ N + I+ ++ + +++L +++ E H+ D+ +S + +GI+ L++
Sbjct: 1484 RSNLEKVVDQITHFEAKRANINQESLDAKDKPENEHHNKDDDGKLMSDAELGIRLRRLYE 1543
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASS-SYMLHSVA 361
++ + + L +Q+ + N E L+ L+ LK A + ++T S L+SV
Sbjct: 1544 QKRKIYKDLSAVQAQERKANY----EMRTLKQKLRKSILKEAQIVVTTLSGCGGDLYSVC 1599
Query: 362 MEPL--------------NFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPA 404
E L + +VIDEAAQ E + IPLQL G K ++ GD QLPA
Sbjct: 1600 AESLAAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPKQLPA 1658
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V S V+++ + S+FERL GY +L+ QYRMHP I FP+ +FY+NK+ + +
Sbjct: 1659 TVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMS 1718
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK 522
+S F GPY F ++ G+E S N E +++L K +
Sbjct: 1719 SKSAP--FHENHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEF 1776
Query: 523 EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-- 580
IGI++PY Q+ ++ + + +++ ++DGFQG E D++++STVR+
Sbjct: 1777 VAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHS 1836
Query: 581 -----NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
N IGF+++ +R+NVALTRA+ LW+LGN RTL R + W ALV DA R+
Sbjct: 1837 APDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREV-- 1893
Query: 636 NADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRK 687
I+ VK+ P + +F + N SEN K+F K
Sbjct: 1894 -----------IIPVKR----------PYNYMFGENVMEQNHSENLPKNFPK 1924
Score = 40.8 bits (94), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL 74
L S+ N+SQ QA+ + I LI GPPGTGKT+T+ ++ LL
Sbjct: 1287 LKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGLL 1337
>gi|302801241|ref|XP_002982377.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
gi|300149969|gb|EFJ16622.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
Length = 1811
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 153/273 (56%), Gaps = 12/273 (4%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFE 422
+ ++IDEAAQ E + IPLQL +L GD QLPA V S ++ F S+FE
Sbjct: 735 FDAVIIDEAAQAVEPSTLIPLQLLKATRGKCILIGDPKQLPATVLSVPASRLLFDCSMFE 794
Query: 423 RLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYS 482
R GY +L+ QYRMHP I FP++++Y +++D STV + F + PY
Sbjct: 795 RFQKHGYPVSMLTTQYRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSATFHRERCFEPYR 854
Query: 483 FINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
F ++ G+E S N E + ++L L + + + IG+++PY Q +Q
Sbjct: 855 FFDIRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQ 914
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS---IGFLSNSKRVNVAL 598
E + S + + V ++D FQG E D+I++STVR++ G S +GFL++ +R+NVAL
Sbjct: 915 ENMRSLHS-----GIDVNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVAL 969
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
TRA+ LW++GNARTL R W+AL+ D R
Sbjct: 970 TRAKFSLWVVGNARTLERNPD-WKALLQDCRRR 1001
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 41/117 (35%)
Query: 17 NETFGPSLSSTL----NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI 72
++ P L S L N+SQ ++ + QM I LI GPPGTGKT+T+ ++
Sbjct: 460 TQSLPPQLRSKLRREYNESQLSSIAAVADQM-------ISLIQGPPGTGKTRTILGIVSA 512
Query: 73 LL-----------------------QMKF-------RTLVCTPTNVAIKELAARVVK 99
LL Q KF R LVC +N A+ EL R+ K
Sbjct: 513 LLAHANEEAGKAEEHEMLDVLTDKHQTKFRDKLKATRILVCAQSNAAVDELVTRISK 569
>gi|225678137|gb|EEH16421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2216
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 190/349 (54%), Gaps = 11/349 (3%)
Query: 322 NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKES 379
NL +A DLL ++ L+ A + +T S S M S+ +E ++IDEAAQ E
Sbjct: 1511 NLVAARNADLLRRKIQQNILEDAHVLCATLSGSGHEMFQSLDIE-FETVIIDEAAQSIEL 1569
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQY 438
+ IPL+ G +L GD QLP V SKV++ + +SLF R+ + HLL QY
Sbjct: 1570 SALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQANHPQDVHLLDTQY 1628
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPMYGPYSFINVFGGREEFIE-H 496
RMHP IS FP++ FY+ +++D + K R H + GPY F +V G + H
Sbjct: 1629 RMHPEISRFPSAAFYDGRLQDGPDMDK--LRSRIWHKSELLGPYRFFDVQGLHSSAPKGH 1686
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ EV V MK+ L + IGI++PY Q+ ++ + +KY +S +
Sbjct: 1687 SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSIFTMI 1746
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
+ + D FQG E ++II S VR+++ G IGFL++ +R+NV LTRA+ LW+LG++++L +
Sbjct: 1747 EFNTTDAFQGRECEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQ 1805
Query: 617 KKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPES 665
+ W L+ DA+ R+ D L K + EL++++ + P S
Sbjct: 1806 GE-FWRGLISDAHTRKLVTQGDILGILQKPQIIPDIELNDVEMIDAPRS 1853
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 149/263 (56%), Gaps = 9/263 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E ES +PL + G K V GD CQL +V SK + +A FG+SLFERL L
Sbjct: 619 VLIDEATQATEPESLLPL-IHGCKQVVFVGDHCQLGPVVTSKTAAKAGFGQSLFERLVAL 677
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L+IQYRMHPS++ FP++ FYE +++ T +R P+ F V
Sbjct: 678 GIRPLRLTIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKPSSVSFPWPVAAKPFFFYVQ 737
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-VVAIQEKL 544
G EE S N VE V KI+ + K +D + IG+++PY Q +Q L
Sbjct: 738 TGPEEVSASGTSFLNRVEADAVEKIVSHFLKNGVDPQR---IGVITPYEGQRAFIVQHFL 794
Query: 545 GSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S + + ++V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRAR
Sbjct: 795 RSGTMRLELYKEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRARF 854
Query: 604 CLWILGNARTLTRKKSVWEALVH 626
L ILGN + L KK +W L+
Sbjct: 855 GLIILGNPKVLA-KKWLWACLLQ 876
Score = 43.5 bits (101), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 17 NETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLV----- 71
N P L LN SQ AV + L ++ + L+ GPPGTGKT T + ++
Sbjct: 431 NNLNAPGLPE-LNPSQKAAVKAAL-------ESPLSLVQGPPGTGKTVTSATIVYHLANN 482
Query: 72 ---ILLQMKFR-----TLVCTPTNVAIKELAARV 97
I + K R LVC P+N+A+ +LA ++
Sbjct: 483 VKNITQRQKTRKCSRQILVCAPSNIAVDQLAEKI 516
>gi|68465577|ref|XP_723150.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|68465870|ref|XP_723003.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445015|gb|EAL04286.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445171|gb|EAL04441.1| potential nuclear RNA processing factor [Candida albicans SC5314]
Length = 2018
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 219/426 (51%), Gaps = 38/426 (8%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--ML 357
++K+RSE + +KL + ++ + K++ +++ L A + ST S S ++
Sbjct: 1473 INKKRSE---LAKKLDEQREKASIANRT-KEINRRNIQARILSEAQVLCSTLSGSAHDLV 1528
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+++++ + ++IDEA Q E + IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1529 ANLSVQ-FDQVIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNYE 1586
Query: 418 RSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFL 473
+SLF R+ S ++L +QYRMHP IS FP+S FY +K++D + R + K
Sbjct: 1587 QSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHK--- 1643
Query: 474 HGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
P PY F ++ G E+ + S N E V +++ L + K IGI+SP
Sbjct: 1644 -DPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISP 1702
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y Q+ I+E KY + ++DGFQG E+++II+S VR++ G++GFLS+ +
Sbjct: 1703 YKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVR 1762
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC-------FFNADDDKDLGK 645
R+NVALTRA+ LWILGN +L+R + VW+ L+ DA R C F N + K
Sbjct: 1763 RMNVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGERNCITQAYPGFLNPSNPNSGLK 1821
Query: 646 AILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFR----KLTSDPTKKSVIHLL 701
+KE + + P+ F ++ N SE + R K T PT V+
Sbjct: 1822 -----RKE----ENVFTPQQTKFAKKQKVSNESERNVHKIRNNLTKPTYRPTNAGVLPSK 1872
Query: 702 LKLSNG 707
K SNG
Sbjct: 1873 SKSSNG 1878
Score = 46.6 bits (109), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 26/97 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
+NDSQA+A++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1297 VNDSQARAIMGTFKS------EGFSLIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISG 1350
Query: 77 ---------KFRTLVCTPTNVAIKELAARVVKLVKES 104
K + L+C P+N A+ EL R+ V+ S
Sbjct: 1351 SGSSPTPSDKAKILICAPSNAAVDELVLRLRDGVRNS 1387
>gi|402223041|gb|EJU03106.1| hypothetical protein DACRYDRAFT_115362 [Dacryopinax sp. DJM-731 SS1]
Length = 2132
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 156/274 (56%), Gaps = 5/274 (1%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E S IPL+ K +L GD QLP V S+++ + + RSLF R+ +
Sbjct: 1593 VVIDEAAQSVEMSSLIPLKYQ-CKRCILVGDPEQLPPTVLSQIAEQQGYSRSLFVRIMHR 1651
Query: 428 -GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+ HLLSIQYRMHP IS ++ FY+N+++D + +++ + + P++ PY F +V
Sbjct: 1652 RPEAVHLLSIQYRMHPEISALDSAMFYDNRLKDGPGMAEKTAQP-WHADPLFSPYRFFDV 1710
Query: 487 FGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G + HS N E S+++ + + + IGIV+ Y Q+ ++
Sbjct: 1711 DGQETKARAGHSLVNDAEASMILGLFGRIRAEFPAVNFDYRIGIVTMYREQMFKLRRMFR 1770
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHC 604
Y AV ++DGFQG E+D+II+S VR+ N S+GFL++ +R NVA+TRAR
Sbjct: 1771 DYYGEHILTAVDFNTVDGFQGQEKDIIILSCVRAGPNQSSVGFLADRRRTNVAITRARSN 1830
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
L+I GNA TL R ++W+++V +A R D
Sbjct: 1831 LFIFGNAATLERSDAIWKSIVQNAQERNVLMKVD 1864
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 21/92 (22%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
+N+ QA A+L M+ D LI GPPGTGKTKT+ L+ L
Sbjct: 1352 VNEPQANAILGS---MQGD---GFTLIQGPPGTGKTKTICGLVGCWLSKRGSATHPARPS 1405
Query: 76 ---MKFRTLVCTPTNVAIKELAARVVKLVKES 104
K + L+C P+N AI E+A R+ V+ S
Sbjct: 1406 EKPAKSKILICAPSNAAIDEVARRIKDGVRTS 1437
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 193/345 (55%), Gaps = 18/345 (5%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--ML 357
++K+RSE + +KL + ++ + K++ +++ L A + ST S S ++
Sbjct: 1474 INKKRSE---LAKKLDEQREKASIANRT-KEINRRNIQARILSEAQVLCSTLSGSAHDLV 1529
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+++++ + ++IDEA Q E + IPL+ G + ++ GD QLP V S+ + +
Sbjct: 1530 ANLSVQ-FDQVIIDEACQCLELSAIIPLRY-GCRKCIMVGDPNQLPPTVLSQAAASYNYE 1587
Query: 418 RSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV---RKRSYEKRFL 473
+SLF R+ S ++L +QYRMHP IS FP+S FY +K++D + R + K
Sbjct: 1588 QSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELNTRPWHK--- 1644
Query: 474 HGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
P PY F ++ G E+ + S N E V +++ L + K ++GI+SP
Sbjct: 1645 -DPPLTPYRFFDILGKHEKNELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSGNVGIISP 1703
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y Q+ I+E KY + ++DGFQG E+++II+S VR++ G++GFLS+ +
Sbjct: 1704 YKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVR 1763
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
R+NVALTRA+ LWILGN +L+R + VW L+ DA+ R+C A
Sbjct: 1764 RMNVALTRAKTTLWILGNKESLSRNE-VWRKLLTDADERKCVTQA 1807
Score = 46.2 bits (108), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 26/97 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
+NDSQA+A++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1298 VNDSQARAIMGTFKS------EGFSLIQGPPGTGKTKTILGIVGYSLSQEKNKKVIDISE 1351
Query: 77 ---------KFRTLVCTPTNVAIKELAARVVKLVKES 104
K + L+C P+N A+ EL R+ V+ S
Sbjct: 1352 SGSSPAPSDKAKILICAPSNAAVDELVLRLRDGVRNS 1388
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S M ++ +E +V+DEAAQ E + IPL+ G A+L GD QLP V SK
Sbjct: 1517 SGSGHEMFQNLNIE-FETVVVDEAAQCVEMSALIPLKY-GCAKAILVGDPKQLPPTVFSK 1574
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
+ + +SLF R+ + HLL QYRMHP IS FP+ FY+ ++ D + +
Sbjct: 1575 EAARFQYEQSLFVRMQTNHPNDVHLLDTQYRMHPEISYFPSQTFYDGRLLDGADMAALR- 1633
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKI---LLNLYKAWIDSKEK 524
EK + + PY F +V G + + HS N+ E+ V M + L+N +K +D + K
Sbjct: 1634 EKPWHSSTLLAPYRFFDVQGQHQSAPKGHSLINIAEIDVAMALYSRLMNDFKDSVDLRGK 1693
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
IGI++PY +Q+ ++++ +Y ++ V+ + D +QG E ++II S VR++ G
Sbjct: 1694 --IGIITPYKSQLRELKDRFARQYGDTVFEYVEFNTTDAYQGRESEIIIFSCVRASPAGG 1751
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
IGFL + +R+NV LTRA+ LW+LGN+++L R + W+ LV DA R+ + D
Sbjct: 1752 IGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGQ-FWKLLVEDAQKRERYTTGD 1804
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 180/324 (55%), Gaps = 16/324 (4%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
++ A++ ST S+S + N +++DE+ Q E S IPL + I+ +L GD
Sbjct: 1507 IRNANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPL 1566
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QLP + S S E SLFERLS + +L+ QYRMHP+IS FP++ FY++++ D
Sbjct: 1567 QLPPTIFSSGSAENGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFYKDRLLDG 1625
Query: 461 STVRKRSYEKRFLHGPM-YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
V+ Y + H + YGP F +V +EE + S +N +E+++V ++ L + +
Sbjct: 1626 DNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYP 1685
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ K K S GI++PY Q I+E+ K N ++ +IDG QG E+D+II+S VRS
Sbjct: 1686 ECK-KFSFGIITPYKLQKSEIKEQ--HKQFN-YPLNIETSTIDGVQGSEKDIIILSCVRS 1741
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
IGFLS+ +R+NVALTRA+ L+++GN++ L +K W ++ + D
Sbjct: 1742 ER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPFCQYVHSINSMVSID- 1796
Query: 640 DKDLGKAILAVKKELDELDELLNP 663
K I +++++ E D LNP
Sbjct: 1797 ----SKGISVLEQQIQEYDS-LNP 1815
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTP 85
LN SQ A+ + L K I LI GPPGTGKT T+ LL ILL + KF+ LVC P
Sbjct: 1395 LNASQFNAIETSL------SKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1448
Query: 86 TNVAIKELAARVVK 99
++ ++ E+A R +K
Sbjct: 1449 SHASVDEVAKRCLK 1462
>gi|299115307|emb|CBN74123.1| SEN1 protein [Ectocarpus siliculosus]
Length = 1430
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 167/292 (57%), Gaps = 21/292 (7%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ +V+DEAAQ E S IPL+ + + ++ GD QLPA + SK + A + +SLF RL
Sbjct: 774 FDAVVMDEAAQAVEPSSMIPLKYN-PRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRL 832
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G+ K +L QYRMHP I+ F ++ FY +R + TV + S+ + F P + PY F
Sbjct: 833 QRGGHPKTMLDTQYRMHPDIASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFH 892
Query: 485 NVFGGR-----EEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
NV GGR E + S N EVS + +L +L + + IG+++PY Q+
Sbjct: 893 NVSGGRLKRGGEGYGGAKSLSNPTEVSYITSLLQDLITTFPGTDFNGRIGVIAPYRNQIR 952
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS-----------NNGGSIGF 587
A+Q + S + G V+V ++DGFQG E+D++I S VR+ ++GG IGF
Sbjct: 953 ALQRGMWSTGLRHDG--VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGF 1010
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
L + +R+NVA+TRA+ +WI+G+A L ++ + W L++D+ R F ++ +
Sbjct: 1011 LDDWRRLNVAITRAKFAMWIVGHAGVL-KQSTDWRELINDSKKRNAFIDSSN 1061
>gi|396463537|ref|XP_003836379.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
gi|312212932|emb|CBX93014.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
Length = 1964
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 164/301 (54%), Gaps = 12/301 (3%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S M +++E +++DEAAQ E + IPL+ G +L GD QLP V SK
Sbjct: 1503 SGSGHEMFQGLSIE-FETVIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTVFSK 1560
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRK 465
+ + +SLF R+ HLL QYRMHP IS FP+ FY+ K+ D + +RK
Sbjct: 1561 EAARFQYEQSLFVRMQKNHPDDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMAGLRK 1620
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEK 524
+ + + L GPY F +V G +E + HS NM E+ + +++ L + D K
Sbjct: 1621 KPWHQSML----LGPYRFFDVQGQQEAAPKGHSLINMKEIDIAIQLYTRLISDYPDYDFK 1676
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
+GI++PY +Q+ ++ + +++ + + D FQG E ++II S VR++ G
Sbjct: 1677 GKVGIITPYKSQLRELKARFMARFGEKTDEMIDFNTTDAFQGRESEIIIFSCVRASPAGG 1736
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLG 644
IGFL + +R+NV LTRA+ LW+LGN+++L R + W+ LV DA R + D K L
Sbjct: 1737 IGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGE-FWKKLVLDAKNRDRYTGGDVTKMLN 1795
Query: 645 K 645
+
Sbjct: 1796 Q 1796
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 35/139 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N++QA+A+ S L D+ A LI GPPG+GKTKT++ ++ +L RT
Sbjct: 1275 VNNAQAKAIKSAL-----DNDA-FTLIQGPPGSGKTKTITAIVGAILTDSLRTRGTTINV 1328
Query: 81 -------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
LVC P+N A+ EL R + + ++ + R+ +I+ LG ++
Sbjct: 1329 PGQQRPNTATKKLLVCAPSNAAVDELVMRFMDGIT-TLNGEKRNV------NIVRLGRSD 1381
Query: 128 RLKVDSGVEEIYLDYRVKR 146
+KV+ V+E+ L+ V +
Sbjct: 1382 AIKVE--VQEVTLETLVAK 1398
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 12/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E + +P+ G + VL GD QLP V S+ + + G+SLFERL+
Sbjct: 389 VLMDEATQASEPSALVPIT-RGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTEC 447
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G H+L+ QYRMHP+I +P++ FYE+++ D T R FL P +F+ +
Sbjct: 448 GLDTHMLTTQYRMHPTIREYPSARFYEDRLDDGCTPADRPPAAGFLWPDWDHPVAFVPID 507
Query: 488 GGREEFIEH---SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV---VAIQ 541
G E ++ S N+ E + V+ I+ L A IG+++PYS QV V +
Sbjct: 508 G--SEIVDEEGSSKSNLDEAAKVLSIVNGLLSA--GDLTPADIGVITPYSGQVRLLVDLF 563
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
E+ G + + +++ S+DG+QG E+++I+ S VR+N G IGFL + +R+NVA+TRA
Sbjct: 564 EQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRA 623
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
R L +LGN +TL R W A + A R F
Sbjct: 624 RRGLIVLGNTKTL-RHDGTWRAWLDWAEERNLF 655
Score = 40.8 bits (94), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP- 85
TLN SQ AV S L + + LI GPPGTGKT T LL L+ + ++ T
Sbjct: 213 TLNPSQRAAVESALERR-------LTLIQGPPGTGKTHTAVHLLSALVNIGRGPILATAE 265
Query: 86 TNVAI 90
+NVA+
Sbjct: 266 SNVAV 270
>gi|238880881|gb|EEQ44519.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 2018
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 219/426 (51%), Gaps = 38/426 (8%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--ML 357
++K+RSE + +KL + ++ + K++ +++ L A + ST S S ++
Sbjct: 1473 INKKRSE---LAKKLDEQREKASIANRT-KEINRRNIQARILSEAQVLCSTLSGSAHDLV 1528
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+++++ + ++IDEA Q E + IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1529 ANLSVQ-FDQVIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNYE 1586
Query: 418 RSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFL 473
+SLF R+ S ++L +QYRMHP IS FP+S FY +K++D + R + K
Sbjct: 1587 QSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHK--- 1643
Query: 474 HGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
P PY F ++ G E+ + S N E V +++ L + + IGI+SP
Sbjct: 1644 -DPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDRFSGKIGIISP 1702
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
Y Q+ I+E KY + ++DGFQG E+++II+S VR++ G++GFLS+ +
Sbjct: 1703 YKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVR 1762
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC-------FFNADDDKDLGK 645
R+NVALTRA+ LWILGN +L+R + VW+ L+ DA R C F N + K
Sbjct: 1763 RMNVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGERNCITQAYPGFLNPSNPNPGLK 1821
Query: 646 AILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFR----KLTSDPTKKSVIHLL 701
+KE + + P+ F ++ N SE + R K T PT V+
Sbjct: 1822 -----RKE----ENVFTPQQTKFAKKQKVSNESERNVHKIRNNLTKPTYRPTNAGVLPSK 1872
Query: 702 LKLSNG 707
K SNG
Sbjct: 1873 SKSSNG 1878
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 26/97 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
+NDSQA+A++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1297 VNDSQARAIMGTFKS------EGFSLIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISG 1350
Query: 77 ---------KFRTLVCTPTNVAIKELAARVVKLVKES 104
K + L+C P+N A+ EL R+ V+ S
Sbjct: 1351 SGSSPTPSDKAKILICAPSNAAVDELVLRLRDGVRNS 1387
>gi|449549000|gb|EMD39966.1| hypothetical protein CERSUDRAFT_150792 [Ceriporiopsis subvermispora
B]
Length = 1925
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 167/310 (53%), Gaps = 12/310 (3%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHA 393
++ L+ A + ST S S + +E L+F ++IDEAAQ E S IPL+
Sbjct: 1496 FRAEVLREADVICSTLSGSAYEY---LEELDFDLIIIDEAAQSIELSSLIPLKYR-CSRC 1551
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYRMHPSISCFPNSYF 452
V+ GD QLP V+S+ + + + +SLF RL + HLLSIQYRMHP IS P+ F
Sbjct: 1552 VMVGDPQQLPPTVKSQEACKFGYDQSLFVRLHKQNSNVAHLLSIQYRMHPDISRLPSQLF 1611
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE---HSCRNMVEVSVVMK 509
Y +++D + ++ H P +G Y F NV GREE HS N E V +
Sbjct: 1612 YNKRLQDGPDMAVKTRRPWHSH-PKFGTYRFFNVGEGREEAGHGGGHSLVNRSEAQVAVA 1670
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
+ L + + +GI+S Y Q+ ++ ++ + + ++DGFQG E+
Sbjct: 1671 LYNRLRQEFKAFDFDFKVGIISMYRGQIWELRRVFEQRFGSDITGTIDFNTVDGFQGQEK 1730
Query: 570 DLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
D+II+S VR+ G S+GFL + +R+NVALTRA+ L++LG+A TL R VW +V DA
Sbjct: 1731 DVIILSCVRAGPGVTSVGFLRDIRRMNVALTRAKSSLFVLGHASTLERSDDVWRDIVVDA 1790
Query: 629 NARQCFFNAD 638
R C + D
Sbjct: 1791 RTRSCLADTD 1800
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 36/148 (24%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-------- 79
+N+ QA+A+L+ L+ GPPGTGKT T+ L+ L + R
Sbjct: 1280 VNEPQARAILNAFAVQ------GFSLVQGPPGTGKTSTICGLVHAFLSRRPRPVTAVTIG 1333
Query: 80 -------------TLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
L+C P+N AI E+A R +KE V R ++ ++ +GN+
Sbjct: 1334 RTAGPADKEPAKKVLLCAPSNAAIDEIAHR----LKEGVSGAGRRSI---CPQVVRVGNS 1386
Query: 127 ERLKVDSGVEEIYLDYRVKRLADCFAPL 154
+ V V +I L+ +++ + + L
Sbjct: 1387 NSMNV--SVRDISLESLIEQKLNAYPGL 1412
>gi|392591642|gb|EIW80969.1| hypothetical protein CONPUDRAFT_104043 [Coniophora puteana RWD-64-598
SS2]
Length = 1855
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 173/311 (55%), Gaps = 12/311 (3%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQL 387
D + ++ L+ A + ST S + H +E L F ++IDEAAQ E S IPL+
Sbjct: 1414 DAIRRRFRAEILQEADVICSTLSGAG--HET-IEQLEFEMVIIDEAAQAIELSSLIPLKF 1470
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS-YLGYSKHLLSIQYRMHPSISC 446
+ +L GD QLP V S+ + + + +SLF RL + + HLLSIQYRMHP IS
Sbjct: 1471 PCAR-CILVGDPQQLPPTVLSQDACKYLYNQSLFVRLQKHRPDAVHLLSIQYRMHPDISR 1529
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLH-GPMYGPYSFINVFGGRE-EFIEHSCRNMVEV 504
P+ FY+ +++D + +++ ++ H P+ G Y F NV G+E E S +N++E
Sbjct: 1530 LPSRIFYQGRLQDGPGMAEKT--RQVWHDNPLLGTYRFFNVSKGQESESNGRSLKNVLES 1587
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
V + + L + +G+VS Y QV+ +Q ++ V+ ++DGF
Sbjct: 1588 QVAVALFSRLRTEYKGIDFDFRVGVVSMYRGQVLELQRAFEQRFGADIKGKVQFHTVDGF 1647
Query: 565 QGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
QG E+D+II+S VR+ G S+GFLS+ +R+NV++TRA+ L+ILGNA TL R S W
Sbjct: 1648 QGQEKDIIILSCVRAGPGLQSVGFLSDVRRMNVSITRAKSSLFILGNAATLERSDSNWRQ 1707
Query: 624 LVHDANARQCF 634
++ DA R
Sbjct: 1708 IIQDARTRNVL 1718
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 197/367 (53%), Gaps = 19/367 (5%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K++++ L + S + N +A + +L ++ + A + +T S S M
Sbjct: 1472 LLKKKKTQ----LSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGHEM 1527
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E +VIDEAAQ E + IPL+ G +L GD QLP V SKV+++ +
Sbjct: 1528 FQNLSIE-FETVVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRF 472
+SLF R+ + HLL IQYRMHP IS FP+S FY+ +++D + +R R + +
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSE 1645
Query: 473 LHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVS 531
L PY F +V G + + HS N+ E+ V M++ L + IGI++
Sbjct: 1646 L----LSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRKIGIIT 1701
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
PY Q+ ++ + ++Y N + + D FQG E ++II S VR++N G IGFL++
Sbjct: 1702 PYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADI 1760
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK 651
+R+NV LTRA+ LW+LGN++ L + + W L+ DA R + + D K L +
Sbjct: 1761 RRMNVGLTRAKSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGDVLKILQRPQFTGY 1819
Query: 652 KELDELD 658
+ +D LD
Sbjct: 1820 QNVDMLD 1826
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 203/371 (54%), Gaps = 27/371 (7%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K++++ L + S + N +A + +L ++ + A + +T S S M
Sbjct: 1472 LLKKKKTQ----LSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGHEM 1527
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E +VIDEAAQ E + IPL+ G +L GD QLP V SKV+++ +
Sbjct: 1528 FQNLSIE-FETVVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRF 472
+SLF R+ + HLL IQYRMHP IS FP+S FY+ +++D + +R R + +
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSE 1645
Query: 473 LHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKI---LLNLYKAW-IDSKEKLSI 527
L PY F +V G + + HS N+ E+ V M++ L+ ++A+ D K I
Sbjct: 1646 L----LSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRK----I 1697
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
GI++PY Q+ ++ + ++Y N + + D FQG E ++II S VR++N G IGF
Sbjct: 1698 GIITPYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGF 1756
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
L++ +R+NV LTRA+ LW+LGN++ L + + W L+ DA R + + D K L +
Sbjct: 1757 LADIRRMNVGLTRAKSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGDVLKILQRPQ 1815
Query: 648 LAVKKELDELD 658
+ +D LD
Sbjct: 1816 FTGYQNVDMLD 1826
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 154/263 (58%), Gaps = 8/263 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
F++IDEA Q E E +P+ L G KH +L GD QL +V+S+ + RSLFERL
Sbjct: 543 FVLIDEATQAIEPECLLPM-LKGAKHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQ 601
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG L +QYRMHP ++ FP++ FYE +++ T+ R++ F P FINV
Sbjct: 602 LGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINV 661
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEK 543
G +E + S + + + + +Y + ++ + IGI++PY Q +++ ++
Sbjct: 662 TG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYILSYLQR 719
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
G N ++V S+DGFQG E+D IIIS VRSN+ IGFL+N +R+NV +TRAR+
Sbjct: 720 NGQLPYNQYR-DIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARY 778
Query: 604 CLWILGNARTLTRKKSVWEALVH 626
L ++GNAR L+ K ++W +++
Sbjct: 779 GLIVIGNARVLS-KDNLWNNMLN 800
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 13 EGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI 72
E + + P+L LN QA AV L K+ + LI GPPGTGKT T + ++
Sbjct: 361 ESIPQKLSAPNLPD-LNVYQADAVKKAL-------KSPLSLIQGPPGTGKTVTSATIVYQ 412
Query: 73 LL------QMKFRTLVCTPTNVAIKELAARVVK 99
L+ + + + LVC P+N+ + +LA ++ K
Sbjct: 413 LVKAMEKQKQRGQILVCAPSNIVVDQLAEKINK 445
>gi|392566307|gb|EIW59483.1| hypothetical protein TRAVEDRAFT_71533 [Trametes versicolor FP-101664
SS1]
Length = 1937
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 10/303 (3%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L+ A + ST S+S + +E +F ++IDEAAQ E S IP++ + ++ GD
Sbjct: 1503 LQEADVICSTLSASAYEY---LESFDFELVIIDEAAQAIELSSLIPMKYR-CRTCIMVGD 1558
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V+S+ + + + +SLF RL + HLLSIQYRMHP IS P++ FY ++
Sbjct: 1559 PQQLPPTVKSQEACKLGYDQSLFVRLQRSQPEAVHLLSIQYRMHPDISQLPSNLFYGGRL 1618
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYK 516
D + +++ H P +G Y F NV G EE HS N E V + + L K
Sbjct: 1619 LDGPDMAEKTKRAWQTH-PKFGTYRFFNVQAGVEESGAGHSLVNRAEAQVAVALYNRLCK 1677
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ + +G++S Y Q++ ++ ++ V ++DGFQG E+D+II+S
Sbjct: 1678 EFSSANMDFKVGVISMYRGQILELRRAFQQRFGEEVLSMVDFNTVDGFQGQEKDIIILSC 1737
Query: 577 VRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
VR+ G ++GFL + +R+NVALTRA+ L++LGNA TL R W +V +A +R
Sbjct: 1738 VRAGPGVQTVGFLRDVRRMNVALTRAKASLFVLGNAPTLERSDETWRKIVENARSRSSLV 1797
Query: 636 NAD 638
N D
Sbjct: 1798 NVD 1800
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N+ QA A++ L LI GPPGTGKT T+ L+ + L + +T
Sbjct: 1286 VNEPQANAIIKSL------ATEGFALIQGPPGTGKTSTICGLVQLYLARRPKTSSVIHPG 1339
Query: 81 -----------LVCTPTNVAIKELAARV 97
L+C P+N AI E+A R+
Sbjct: 1340 RPAERELPKKILLCAPSNAAIDEIAFRL 1367
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 197/367 (53%), Gaps = 19/367 (5%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K++++ L + S + N +A + +L ++ + A + +T S S M
Sbjct: 1472 LLKKKKTQ----LSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGHEM 1527
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E +VIDEAAQ E + IPL+ G +L GD QLP V SKV+++ +
Sbjct: 1528 FQNLSIE-FETVVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRF 472
+SLF R+ + HLL IQYRMHP IS FP+S FY+ +++D + +R R + +
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSE 1645
Query: 473 LHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVS 531
L PY F +V G + + HS N+ E+ V M++ L + IGI++
Sbjct: 1646 L----LSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRKIGIIT 1701
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
PY Q+ ++ + ++Y N + + D FQG E ++II S VR++N G IGFL++
Sbjct: 1702 PYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADI 1760
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK 651
+R+NV LTRA+ LW+LGN++ L + + W L+ DA R + + D K L +
Sbjct: 1761 RRMNVGLTRAKSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGDVLKILQRPQFTGY 1819
Query: 652 KELDELD 658
+ +D LD
Sbjct: 1820 QNVDMLD 1826
>gi|255081534|ref|XP_002507989.1| predicted protein [Micromonas sp. RCC299]
gi|226523265|gb|ACO69247.1| predicted protein [Micromonas sp. RCC299]
Length = 1002
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 165/307 (53%), Gaps = 7/307 (2%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
E+ L +D +K L A++ ST S S + + + +VIDEAAQ E + +PL
Sbjct: 496 ERALEKDRVKLAILDEAAVVCSTLSFSGSGMFARMTRQFDVVVIDEAAQAVEPSTLVPL- 554
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISC 446
G K L GD QLPA V S ++ + + +SLF+R GY HLL QYRMHP+I
Sbjct: 555 CYGAKQVFLVGDPRQLPATVLSSIATDHNYDQSLFKRFEQCGYPIHLLKTQYRMHPAIRE 614
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINVFGGREEFIEHSCRNMVEVS 505
FP++ FY ++ D + ++ KR H M + P+ FI+V G + S N E +
Sbjct: 615 FPSTQFYSGELEDGPKMAAKT--KRPWHDNMLFRPFVFIDVAGKEYQGGGMSWANDDEAT 672
Query: 506 VVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+ + ++ L K + + IG++SPY AQV I+ +L V V SIDGFQ
Sbjct: 673 LAVALVATLVKNYAELASGEKIGVISPYKAQVKNIRRRLAETLGEERARKVDVNSIDGFQ 732
Query: 566 GGEEDLIIISTVRS-NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
G E+D+ I S VR+ G +GF+++ +R+NV LTR++ L +LG+A+ L + W L
Sbjct: 733 GREKDVCIFSVVRAPAKGRGLGFVADERRINVGLTRSKSSLIVLGSAKAL-KGDDNWGGL 791
Query: 625 VHDANAR 631
V A R
Sbjct: 792 VASARDR 798
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 155/266 (58%), Gaps = 5/266 (1%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS-Y 426
++IDEA Q E + IPL+ G ++ GD QLP V S+ + + +SLF R+
Sbjct: 923 VIIDEACQCVELSAIIPLRY-GCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
S +LL +QYRMHP IS FP++ FY +++ D + + +++ P + PY F ++
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVP-FSPYRFFDI 1040
Query: 487 FGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G ++ S N E VV++++ +L + + IG++SPY Q+ +++
Sbjct: 1041 VGKHQQHESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDIFA 1100
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
KY V ++DG+QG E+++II+S VR++ G++GFLS+ +R+NVALTRAR L
Sbjct: 1101 KKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTL 1160
Query: 606 WILGNARTLTRKKSVWEALVHDANAR 631
WILGN ++L R K VW L+ DA+ R
Sbjct: 1161 WILGNQKSLMRNK-VWSRLLQDASDR 1185
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 43/137 (31%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+SQA A++S +++ LI GPPGTGKTKT+ ++ L
Sbjct: 684 VNESQANAIIST------HNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPLGLIEVDG 737
Query: 75 -----QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGD-----ILLLG 124
Q + LVC P+N A+ EL R+ RD +F G+ ++ LG
Sbjct: 738 QQGKPQTSSKILVCAPSNAAVDELVVRL------------RDGVFNFKGERITPSVVRLG 785
Query: 125 NNERLKVDSGVEEIYLD 141
++ V+S V ++ L+
Sbjct: 786 RSD--AVNSAVRDLTLE 800
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 189/344 (54%), Gaps = 13/344 (3%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--M 356
LL ++R++ L + S + N +A +L ++ + A + +T S S M
Sbjct: 1474 LLKRKRAQ----LSQAIDSARDKNQAAARNAELTRRKIQQEIIDGAHVICATLSGSGHDM 1529
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++++E ++IDEAAQ E + IPL+ G +L GD QLP V SK ++ +
Sbjct: 1530 FQTLSIE-FETVIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQY 1587
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ + HLL QYRMHP IS FP++ FY+ +++D + R + + +
Sbjct: 1588 EQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSTAFYDGRLQDGPDM-ARLRMRPWHNT 1646
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ GPY F +V G + HS N+ E+ V M++ L + IGI++PY
Sbjct: 1647 SLLGPYRFFDVQGMHASAPKGHSLVNLAELRVAMRLYERLIADFPTYDFSGKIGIITPYK 1706
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
Q+ ++++ +KY N+ AV+ + D FQG E ++II S VR+++ G IGFL++ +R+
Sbjct: 1707 GQLRELKQQFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASSHG-IGFLADIRRM 1765
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
NV LTRA+ LW+LGN+++L R + W LV DA R + + D
Sbjct: 1766 NVGLTRAKSSLWVLGNSQSLVRGE-FWRGLVKDARERNLYTDGD 1808
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 26/95 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN +Q++AV S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1295 LNLAQSKAVKSAI-----DNDA-FTLIQGPPGSGKTKTIVALVGALLSNTLSEHRIAPPR 1348
Query: 75 -------QMKFRTLVCTPTNVAIKELAARVVKLVK 102
M + LVC P+N A+ EL R + VK
Sbjct: 1349 PGDKTARSMAKKLLVCAPSNAAVDELVMRFKEGVK 1383
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 155/266 (58%), Gaps = 5/266 (1%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS-Y 426
++IDEA Q E + IPL+ G ++ GD QLP V S+ + + +SLF R+
Sbjct: 923 VIIDEACQCVELSAIIPLRY-GCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
S +LL +QYRMHP IS FP++ FY +++ D + + +++ P + PY F ++
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVP-FSPYRFFDI 1040
Query: 487 FGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G ++ S N E VV++++ +L + + IG++SPY Q+ +++
Sbjct: 1041 VGKHQQHESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDIFA 1100
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
KY V ++DG+QG E+++II+S VR++ G++GFLS+ +R+NVALTRAR L
Sbjct: 1101 KKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTL 1160
Query: 606 WILGNARTLTRKKSVWEALVHDANAR 631
WILGN ++L R K VW L+ DA+ R
Sbjct: 1161 WILGNQKSLMRNK-VWSRLLQDASDR 1185
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 43/137 (31%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+SQA A++S +++ LI GPPGTGKTKT+ ++ L
Sbjct: 684 VNESQANAIIST------HNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPSGLIEVDG 737
Query: 75 -----QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGD-----ILLLG 124
Q + LVC P+N A+ EL R+ RD +F G+ ++ LG
Sbjct: 738 QQGKPQTSSKILVCAPSNAAVDELVVRL------------RDGVFNFKGERITPSVVRLG 785
Query: 125 NNERLKVDSGVEEIYLD 141
++ V+S V ++ L+
Sbjct: 786 RSD--AVNSAVRDLTLE 800
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 187/343 (54%), Gaps = 16/343 (4%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--M 356
+L +R+ + ++ + +SS N A E ++ ++ L A + +T S S M
Sbjct: 1524 VLKRRQMQLGSMIDREKSSGNTY----AREAEVKRRGIQQSILADAHVLCATLSGSGHDM 1579
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++ +E ++IDEAAQ E + IPL+ G VL GD QLP V S+ + +
Sbjct: 1580 FKTLQVE-FETVIIDEAAQCVELSALIPLKY-GASKCVLVGDPKQLPPTVLSQSAARYGY 1637
Query: 417 GRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ +K HLL QYRMHP IS FP+ FYE ++ D + K ++ +
Sbjct: 1638 DQSLFVRMQQNHPTKVHLLDCQYRMHPEISLFPSKEFYEGRLADGDDMAKLR-QQPWHEN 1696
Query: 476 PMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSK---EKLSIGIVS 531
P+ GPY F +V G +E S N EVSV ++I N + S+ K IGI++
Sbjct: 1697 PLLGPYRFFDVEGIQERGNRGQSLVNTNEVSVALQIF-NRFSTDFSSRCGDLKGKIGIIT 1755
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
PY AQ+ A++++ +Y + ++ + D FQG E ++II S VR++ G IGF+++
Sbjct: 1756 PYKAQLHALRQRFLDRYGEAVLEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDI 1815
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+R+NV LTRAR LW+LG++R L ++ W L+ DA AR +
Sbjct: 1816 RRMNVGLTRARSSLWVLGDSRAL-KQGPFWAKLIEDAKARDRY 1857
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 37/147 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN QA A+++ L+ GPPGTGKTKT+ ++ LL
Sbjct: 1341 LNKGQASAIINA------KENDGFTLVQGPPGTGKTKTIIAMVGALLTGNIKINKPPPVP 1394
Query: 75 ---------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGN 125
M + LVC P+N A+ EL R+ +K++ + + ++L LG
Sbjct: 1395 VRPGVNGEAPMARKLLVCAPSNAAVDELVLRLKAGIKDT------NGQMHKI-NVLRLGR 1447
Query: 126 NERLKVDSGVEEIYLDYRVKRLADCFA 152
++ V+ V+++ LD VK D A
Sbjct: 1448 SD--AVNQAVKDVTLDELVKEKMDALA 1472
>gi|389744605|gb|EIM85787.1| hypothetical protein STEHIDRAFT_58796 [Stereum hirsutum FP-91666 SS1]
Length = 2031
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 164/284 (57%), Gaps = 9/284 (3%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L+F ++IDEAAQ E S IPL+ + + D QLP V S +++ + +S
Sbjct: 1540 LEQLDFDMIIIDEAAQAIELSSLIPLKYRSSR-IFMCTDPQQLPPTVISMEASKYMYNQS 1598
Query: 420 LFERLS-YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPM 477
LF RL + + HLLSIQYRMHP IS P++ FY +++D + +++ KR H P
Sbjct: 1599 LFVRLQKHRPDAVHLLSIQYRMHPDISQLPSALFYNGRLQDGPGMVEKT--KRPWHTSPK 1656
Query: 478 YGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
+G Y F NV G+E + HS N EV + + + L + + +G+VS Y Q
Sbjct: 1657 FGTYRFFNVTNGQESQGSSHSYMNTAEVRIAVSLFHRLRQEFSSVDFDFRVGVVSMYREQ 1716
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVN 595
+ +++ ++ V ++DGFQG E+D+II+S VR+ G ++GFL++ +R+N
Sbjct: 1717 IFSLRRAFEQRFGREIIGKVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLADVRRMN 1776
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
VALTR+R L+ILG+A TL R W+A+V DA +R F+ D+
Sbjct: 1777 VALTRSRASLFILGHAPTLERSDQNWKAIVTDARSRSRLFDVDE 1820
Score = 43.5 bits (101), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 26/90 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK---------- 77
+N+ QA A+ S +R I LI GPPGTGKT T+ L+ L +
Sbjct: 1301 VNEPQAVAIASVMR------TEGISLIQGPPGTGKTSTICALVQAFLSKRKTATNIQVGR 1354
Query: 78 ----------FRTLVCTPTNVAIKELAARV 97
+ L+C P+N AI E+ R+
Sbjct: 1355 SSGPADKVPPKKVLLCAPSNAAIDEVVHRL 1384
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 9/305 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ E + IPL + G +
Sbjct: 446 DRIRASILDEAAIVFSTLSFSGSSIFSRMSRAFDVVIIDEAAQAVEPATLIPL-VHGCRQ 504
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S+ + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 505 IFLVGDPVQLPATVISQTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISMFPSKEF 564
Query: 453 YENKIRDSSTV-RKRSYEKRFLHGPMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + RKR + +GP+ F +V G + S N EV + +
Sbjct: 565 YEGVLQDGEGLSRKRPWHSY----SCFGPFCFFDVDGIESQPSGSGSWVNQDEVEFITLL 620
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K +G++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 621 YHQLAMRYPELKSSPEVGVISPYRHQVKLLKDSFRSTFGDQSKELIDVSTVDGFQGREKE 680
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRA+ + ++G+A TL + K W LV A
Sbjct: 681 IVIFSCVRCNEEQKIGFVSDFRRMNVAITRAKSAVLVVGSASTLKQDKH-WNNLVESAKE 739
Query: 631 RQCFF 635
R FF
Sbjct: 740 RNRFF 744
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S + M S+ +E ++IDEAAQ E + I
Sbjct: 1534 AREAEIKRRNIQQSILSEAHVLCATLSGAGHDMFKSLQVE-FETVIIDEAAQCVELSALI 1592
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ K HLL QYRMHP
Sbjct: 1593 PLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQYRMHP 1651
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNM 501
IS +P+ FYE + D S + K ++ + P+ GPY F +V G +E S N
Sbjct: 1652 EISLYPSKEFYEGLLADGSDMAKLR-QQPWHDNPLLGPYRFFDVEGIQERGSRGQSLVNT 1710
Query: 502 VEVSVVMKILLNL---YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
E++V ++I Y + ID K K IGI++PY AQ+ A+++K ++ ++
Sbjct: 1711 NEINVAIQIYTKFQADYASSIDMKGK--IGIITPYKAQLFALRQKFQERWGEGVLEDIEF 1768
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L R+
Sbjct: 1769 NTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRAL-RQG 1827
Query: 619 SVWEALVHDANARQCF 634
W L+ D+ AR +
Sbjct: 1828 EFWNKLIEDSKARDRY 1843
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 35/149 (23%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
LN QA A+++ L+ GPPGTGKTKT+ ++ LL K
Sbjct: 1327 LNRGQAAAIINA------KENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1380
Query: 79 -----------RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ LVC P+N A+ EL R+ +K++ + ++L LG ++
Sbjct: 1381 PANGADEPMAQKLLVCAPSNAAVDELVLRLKAGIKDTNGNTHKI-------NVLRLGRSD 1433
Query: 128 RLKVDSGVEEIYLDYRVKRLADCFAPLTG 156
+++ V ++ LD VK D + G
Sbjct: 1434 --AINAAVRDVTLDELVKEKMDAALNVNG 1460
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 210/405 (51%), Gaps = 25/405 (6%)
Query: 267 LFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL------LHKRRSECHFVLRKLQSSFNE 320
L+E++ ++ + L +DE +K + + L + K+RS+ + K + +
Sbjct: 1445 LYEEHKTTDTSFKELRARLDEARAKGLPPPEELEREFDLMKKKRSQLSTSIDKARDQNHT 1504
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKE 378
L A D+ + ++ + + + +T S S + S+ +E ++IDEAAQ E
Sbjct: 1505 L----ARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQSMNVE-FETVIIDEAAQCIE 1559
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQ 437
+ IPL+ G VL GD QLP V SK++++ + +SLF R+ HLL +Q
Sbjct: 1560 LSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDVHLLDVQ 1618
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP+IS FP+ FY+ K++D +T+R+R + + L GPY F +V G +
Sbjct: 1619 YRMHPAISHFPSVTFYDGKLQDGPDMATLRQRPWHQSEL----LGPYRFFDVQGMHSSAV 1674
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
HS N E+ V M++ L + IGI++PY Q+ ++ + +Y
Sbjct: 1675 RGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDIL 1734
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1735 RKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1793
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
L + + W L+ +A R + D K L K KE++ +D
Sbjct: 1794 LEQGQ-FWNGLIKNARERNVYTEGDIMKILEKPQFTGYKEIEMVD 1837
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 25/100 (25%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
++N +QA+A+ S + D+ A LI GPPG+GKTKT++ L+ LL
Sbjct: 1305 SINRAQARAIKSAV-----DNDA-FTLIQGPPGSGKTKTITALVGSLLSDVLGKQVVKVN 1358
Query: 76 --------MKFRTLVCTPTNVAIKELAARVVKLVKESVER 107
+ + L+C P+N A+ EL R+ VK + R
Sbjct: 1359 GAPVARNALSKKLLLCAPSNAAVDELVMRLKDGVKTTHGR 1398
>gi|410075095|ref|XP_003955130.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
gi|372461712|emb|CCF55995.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
Length = 2250
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 210/390 (53%), Gaps = 30/390 (7%)
Query: 310 VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNF 367
VL K + E N + +DL +S L + + +T S S +L S+ ++ +
Sbjct: 1498 VLGKERDEIRERNSVNYRNRDLDRRNAQSQVLASSDIICATLSGSAHDVLISLGVK-FDT 1556
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1557 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVVSGAASNFKYNQSLFVRMEK- 1614
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINV 486
+ +LL++QYRMHP+IS FP+S FY ++D + + +R H P PY F N+
Sbjct: 1615 NTTPYLLNVQYRMHPAISYFPSSEFYGGLLKDGPNMD--AINQRPWHNTPPLTPYKFFNI 1672
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKE--KLSIGIVSPYSAQVVAIQE 542
GR+E S N+ E+ V ++++ L++ + D K K IGI+SPY Q+ +
Sbjct: 1673 VSGRQEQNSKTMSYTNIEEIKVAIELIDYLFRNF-DQKVNFKGKIGIISPYREQM----Q 1727
Query: 543 KLGSKYVNSAGFAVKVM----SIDGFQGGEEDLIIISTVRSNN-GGSIGFLSNSKRVNVA 597
K+ ++V G ++K +IDGFQG E+++IIIS VR+++ S+GFL + +R+NVA
Sbjct: 1728 KMRREFVVYFGASIKNFIDFNTIDGFQGQEKEIIIISCVRADDTSSSVGFLKDFRRMNVA 1787
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQC-------FFNADDDKDLGKAILAV 650
TRA+ +WILG+ ++L + K +W L+ D++ R C F + + GK
Sbjct: 1788 FTRAKTSMWILGHQKSLYKNK-LWRNLIDDSSRRDCMETAYSGFLSGNKSITYGKTSKER 1846
Query: 651 KKELDELDELLNPESRLFRSQRWKVNFSEN 680
+DE +++ +P S+L K F E+
Sbjct: 1847 FHSIDEDNDIYDPNSQLPSYTAEKREFQED 1876
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 41/139 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV--------------------- 66
LN SQA+A+++ + LI GPPGTGKTKT+
Sbjct: 1305 LNTSQAEAIVNTV------STEGFSLIQGPPGTGKTKTILGIIGYFLSTRSSSPSNAIKV 1358
Query: 67 ----SMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
+ L + L K + L+C P+N A+ E+ R +KE V D +F P +++
Sbjct: 1359 AAETTTLNIEQLLKKQKILICAPSNAAVDEICIR----LKEGV-YDKNGKVFKP--NLVR 1411
Query: 123 LGNNERLKV---DSGVEEI 138
+G ++ + + D +EEI
Sbjct: 1412 VGRSDAVNIAIKDLTLEEI 1430
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S + M S+ +E ++IDEAAQ E + I
Sbjct: 1483 AREAEIKRRNIQQSILSEAHVLCATLSGAGHDMFKSLQVE-FETVIIDEAAQCVELSALI 1541
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ K HLL QYRMHP
Sbjct: 1542 PLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQYRMHP 1600
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNM 501
IS +P+ FYE + D S + K ++ + P+ GPY F +V G +E S N
Sbjct: 1601 EISLYPSKEFYEGLLADGSDMAKLR-QQPWHDNPLLGPYRFFDVEGIQERGSRGQSLVNT 1659
Query: 502 VEVSVVMKILLNL---YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
E++V ++I Y + ID K K IGI++PY AQ+ A+++K ++ ++
Sbjct: 1660 NEINVAIQIYTKFQADYASSIDMKGK--IGIITPYKAQLFALRQKFQERWGEGVLEDIEF 1717
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L R+
Sbjct: 1718 NTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRAL-RQG 1776
Query: 619 SVWEALVHDANARQCF 634
W L+ D+ AR +
Sbjct: 1777 EFWNKLIEDSKARDRY 1792
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 35/149 (23%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
LN QA A+++ L+ GPPGTGKTKT+ ++ LL K
Sbjct: 1276 LNRGQAAAIINA------KENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1329
Query: 79 -----------RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE 127
+ LVC P+N A+ EL R+ +K++ + ++L LG ++
Sbjct: 1330 PANGADEPMAQKLLVCAPSNAAVDELVLRLKAGIKDTNGNTHKI-------NVLRLGRSD 1382
Query: 128 RLKVDSGVEEIYLDYRVKRLADCFAPLTG 156
+++ V ++ LD VK D + G
Sbjct: 1383 --AINAAVRDVTLDELVKEKMDAALNVNG 1409
>gi|255556880|ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
gi|223541336|gb|EEF42887.1| conserved hypothetical protein [Ricinus communis]
Length = 826
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A + ST S S + S + ++IDEAAQ E + +PL +G K
Sbjct: 455 DTIRTAILDEAVIVFSTLSFSGSAMFSKLNHGFDVVIIDEAAQAVEPATLVPL-ANGCKQ 513
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S ++ + + SLFERL GY ++L +QYRMHP I FP+ F
Sbjct: 514 VFLVGDPKQLPATVISPIAEKFGYKTSLFERLQRAGYPVNMLKMQYRMHPQIRDFPSKEF 573
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMK 509
Y +++D+ + +++ KR H +GP+ F ++ G+E S N EV V+
Sbjct: 574 YSEELQDAEKMDEKT--KRDWHEYRCFGPFCFFDIHEGKESQPSGSGSWVNNDEVDFVLH 631
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
+ L + I+SPY QV +Q++ + + V + ++DGFQG E+
Sbjct: 632 MYHKLVTMHPKLRSSSQFAIISPYRNQVKLLQDRFRDMFGQESEQFVDIQTVDGFQGREK 691
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
D+ I S VR+N IGF+S+S+R+NV +TRA+ + ++G+A TL +S W+ LV A
Sbjct: 692 DVAIFSCVRANKDRGIGFVSDSRRMNVGITRAKSTVLVVGSASTLKSDES-WKRLVESAE 750
Query: 630 ARQCFFNADDDKD 642
R F D D
Sbjct: 751 QRGVLFKVDKPYD 763
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 180/325 (55%), Gaps = 16/325 (4%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
++ A++ +T S+S + N +++DE+ Q E S IPL + I+ +L GD
Sbjct: 1705 IIRNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDP 1764
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP + S S + SLFERLS + +L+ QYRMHP+IS FP++ FY++++ D
Sbjct: 1765 LQLPPTIFSSESAKNGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFYKDRLLD 1823
Query: 460 SSTVRKRSYEKRFLHGPM-YGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAW 518
V+ Y + H + YGP F +V +EE + S +N +E+++V ++ L + +
Sbjct: 1824 GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDY 1883
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ K K S GI++PY Q I+E+ K N ++ +IDG QG E+D+II+S VR
Sbjct: 1884 PECK-KFSFGIITPYKLQKSEIKEQ--HKQFN-YPLNIETSTIDGVQGSEKDIIILSCVR 1939
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
S IGFLS+ +R+NVALTRA+ L+++GN++ L +K W ++ + D
Sbjct: 1940 SER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPFCQYVHSINSMVSID 1995
Query: 639 DDKDLGKAILAVKKELDELDELLNP 663
K I +++++ E D LNP
Sbjct: 1996 -----SKGISVLEQQIQEYDS-LNP 2014
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTP 85
LN SQ AV + L I LI GPPGTGKT T+ LL ILL + KF+ LVC P
Sbjct: 1594 LNTSQFSAVETSLST------KGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1647
Query: 86 TNVAIKELAARVVK 99
++ ++ E+A R +K
Sbjct: 1648 SHASVDEVAKRCLK 1661
>gi|449018313|dbj|BAM81715.1| probable tRNA splicing endonuclease positive effector Sen1p
[Cyanidioschyzon merolae strain 10D]
Length = 1250
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 159/286 (55%), Gaps = 13/286 (4%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+VIDEAAQ E + IPLQ G + VL GD QLPA V S+ RSL ERL
Sbjct: 725 IVVIDEAAQATELATLIPLQY-GCERCVLAGDPQQLPATVFSRGDAGVALARSLMERLLQ 783
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF----LHGPMYGPYS 482
G++ HLL QYRMHP+I+ FP +FY+N++++ VR Y F P+ GPY
Sbjct: 784 AGWTGHLLDTQYRMHPAIATFPTRWFYQNQLKNDDCVRSELYRPAFHRTGPPPPLLGPYC 843
Query: 483 FINVFGGREE--FIEHSCRNMVEVSVVMKILLNLY-KAWIDSKEKLSIGIVSPYSAQVVA 539
F+++ EE S N E + M+++ LY + W S +GI++PY AQ+
Sbjct: 844 FVDIAEATEERDATTASLSNPKEAAFAMQLVEILYERYWKASDRVWHLGILTPYRAQMRL 903
Query: 540 IQEKLGSKYVNSAG----FAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNSKRV 594
+Q+ L + G +++ ++D FQG E+D+II S VR+ S IGF+ + +R+
Sbjct: 904 LQQALDQSGLILPGQQMPCTIEIDTVDAFQGREKDVIIFSAVRTAQHRSGIGFVGDVRRL 963
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
NVALTRA+ L +LG+A L + W+AL+ DA R +F + D
Sbjct: 964 NVALTRAKVSLVVLGHAAALRAHSADWDALLCDAEQRGLYFESSSD 1009
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 163/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1588 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1645
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + + PY F
Sbjct: 1646 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL----EPFAPYKFF 1701
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1702 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1760
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1761 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1820
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1821 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1854
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 159/276 (57%), Gaps = 18/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1565 VIVDEACQCTELSSIIPLRY-GAKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1622
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S HLL++QYRMHP+IS FP+ FY+ K+ D T+ R + R P GPY F
Sbjct: 1623 QCSPHLLNVQYRMHPAISKFPSIEFYKGKLTDGPDMETINTRPWHSR----PPLGPYKFF 1678
Query: 485 NVFGGREEFIEHSCR--NMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
++ G++E + + N E V +++ LLN Y+ D K IGI+SPY Q+
Sbjct: 1679 DIATGKQEQNKKTMSFVNFEECKVAIELVEYLLNSYEKSFDFSGK--IGIISPYREQMQT 1736
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNSKRVNVAL 598
++ + + N+ V +IDGFQG E+++IIIS VR+++ S +GFL + +R+NVAL
Sbjct: 1737 MRREFRRYFGNTIAGYVDFNTIDGFQGQEKEIIIISCVRADDTKSGVGFLKDFRRMNVAL 1796
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRA+ +WILG+ +L + K +W L+ DA R C
Sbjct: 1797 TRAKTSMWILGHHSSLFKNK-LWRNLITDAKDRNCL 1831
>gi|384248536|gb|EIE22020.1| hypothetical protein COCSUDRAFT_17170, partial [Coccomyxa
subellipsoidea C-169]
Length = 367
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 177/339 (52%), Gaps = 26/339 (7%)
Query: 324 PSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESES 381
P + K +E L+ + A + +T SS+ + + P ++IDEAAQ E +
Sbjct: 28 PQGINKREVECSLEMSFVMEAEMVFTTLSSTGRRIFQRLEGTPFETVLIDEAAQASEIAA 87
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMH 441
PL + G K AVL GD QLPA V+S E RSLFERL G +LS+QYRMH
Sbjct: 88 LQPL-VFGAKRAVLVGDPQQLPATVKSAKGKELELERSLFERLQRAGCPVKMLSVQYRMH 146
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH---SC 498
P+I FP++YFY ++ D +V K + F P+ PY +V GRE+ S
Sbjct: 147 PTIREFPSNYFYNGRLEDGKSV-KEAKPPVFYEHPLLKPYVIFDVSHGREQRGGSNGGSL 205
Query: 499 RNMVEVSVVMKILL--NLYKAWIDSK-EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG-- 553
RN L +++ W+ + +G+V+PY Q +++ ++ +AG
Sbjct: 206 RNQASPFFYSCFLTSHSIFSGWLAMQLGGCEVGVVTPYKQQKTCLRD----TFLRAAGPE 261
Query: 554 --------FAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNSKRVNVALTRARHC 604
V + ++D FQG + D+II+S VR+++ S +GFL++ +R+NVA+TRA+
Sbjct: 262 ASAKARPLLTVMIETVDSFQGKQLDVIILSCVRASDRKSGVGFLADVRRMNVAITRAKQA 321
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDL 643
LW+LG+A TL R VW AL+ +A R C + + L
Sbjct: 322 LWVLGSAATLER-NPVWAALLANARERGCVIKEANARCL 359
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 14/306 (4%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L+ A + ST S+S + +E +F ++IDEAAQ E S IP++ + ++ GD
Sbjct: 1488 LQEADVICSTLSASAYEY---LESFDFEVVIIDEAAQAIELSSLIPMKYR-CRTCIMVGD 1543
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V+S+ + + +SLF RL HLLSIQYRMHP IS P++ FY+ ++
Sbjct: 1544 PQQLPPTVKSQEACRLGYDQSLFVRLQKSQPDAVHLLSIQYRMHPDISQLPSNLFYDGRL 1603
Query: 458 RDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIE---HSCRNMVEVSVVMKILLN 513
D + ++ KR H P +G Y F +V G EE + HS N E V + +
Sbjct: 1604 SDGPEMAAKT--KRPWHNHPKFGTYRFFSVESGTEENMPGTGHSLVNRSEAQVAVALYNR 1661
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
L K + + +G++S Y Q+V ++ ++ V ++DGFQG E+D+II
Sbjct: 1662 LIKEFSSTDFDFKVGVISMYRGQIVELKRAFRQRFGEEVLSTVDFNTVDGFQGQEKDIII 1721
Query: 574 ISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
+S VRS ++GFL + +R+NVALTRA+ L++LGNA TL R +W +V +A +R
Sbjct: 1722 LSCVRSGPSLQTVGFLRDVRRMNVALTRAKASLFVLGNAPTLERSDDIWRKIVDNARSRT 1781
Query: 633 CFFNAD 638
AD
Sbjct: 1782 SLIKAD 1787
Score = 47.0 bits (110), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N+ QA A+L L LI GPPGTGKT T+ L+ + L + +T
Sbjct: 1276 VNEPQANAILKSL------DTEGFALIQGPPGTGKTSTICGLVQLYLSRRSKTIGRPGDK 1329
Query: 81 ------LVCTPTNVAIKELAARVVKLVKESVER 107
L+C P+N AI E+A R+ + V + R
Sbjct: 1330 EIPKKILLCAPSNAAIDEIAFRLKEGVSGAGHR 1362
>gi|118349864|ref|XP_001008213.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89289980|gb|EAR87968.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1866
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 183/356 (51%), Gaps = 26/356 (7%)
Query: 312 RKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAME----PLNF 367
RKLQS + L L +D ++++ L A + T +SS S +E +
Sbjct: 1031 RKLQSKISILKLEKVARRDQIKNISDQL-LGLADVVCCTLASSM---SEKLERFKNQVEV 1086
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
L++DEAAQ E + IPL K +L GD QLPA SN + RSLFER+
Sbjct: 1087 LIVDEAAQCTEPNNIIPLYYQPNK-MILIGDPKQLPATTFQPESNITKYNRSLFERIIDN 1145
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
+ L QYRMHP+I FP+ FY+NK++D +V R + +L FI++
Sbjct: 1146 KIKPYFLDQQYRMHPNIREFPSIQFYDNKLKDGPSVANRPF-PNYLQRLERFNTQFIDIV 1204
Query: 488 GGREEFIEHSCRNMVE----VSVVMKILLNL---YKAWIDSKEKLSIGIVSPYSAQVVAI 540
RE+ + S N E +S+ +I+ + K +SKE LSIGI++PY Q I
Sbjct: 1205 FSREKMNQKSYENEAEGLASISICNQIIDEIERQQKVQPESKETLSIGIITPYKQQTRLI 1264
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-----IGFLSNSKRVN 595
E + + S ++V ++D FQG E+D+II +TVR N+ IGFL + +R+N
Sbjct: 1265 NELIRKQIPKSYHKFIQVNTVDSFQGQEKDIIIFTTVRVNSKQEWRENMIGFLQDERRMN 1324
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVH---DANARQCFFNADDDKDLGKAIL 648
VALTRA++CL +LG+A TL VW A V N F N D D+GK +L
Sbjct: 1325 VALTRAKYCLIVLGHADTLN-SNPVWGAFVDFMAKNNRYGKFRNKDQISDIGKMVL 1379
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 194/352 (55%), Gaps = 27/352 (7%)
Query: 305 SECHFVLRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
S+ +R+L NEL N + +DL ++ L + + ST S S
Sbjct: 472 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 531
Query: 355 Y--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+L ++ ++ + ++IDEA Q E S IPL+ G K ++ GD QLP V S ++
Sbjct: 532 AHDVLATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAAS 589
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +SLF R+ S +LL +QYRMHPSIS FP+S FY+ +++D + KR
Sbjct: 590 NFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRP 646
Query: 473 LHG--PMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS-- 526
H P+ PY F ++ GR+E S NM E+ V ++++ L++ + D+K +
Sbjct: 647 WHQLEPL-APYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGK 704
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSI 585
IGI+SPY Q+ ++++ + ++ +IDGFQG E+++I+IS VR+++ S+
Sbjct: 705 IGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSV 764
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
GFL + +R+NVALTRA+ +W+LG+ R+L + K +W L+ DA R C A
Sbjct: 765 GFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCLAYA 815
>gi|297850080|ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
gi|297338763|gb|EFH69180.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
Length = 2129
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 231/472 (48%), Gaps = 62/472 (13%)
Query: 247 KDNFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG---LSKSIVGIKYL-LHK 302
+ N + I+ ++ + +++L +++ E H+ D+ +S + +GI+ L++
Sbjct: 1389 RSNLEKIVDQITHFEAKRANINQESLDAKDKPENEHHNKDDDGKPMSDAELGIRLRRLYE 1448
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASS-SYMLHSVA 361
++ + + L +Q+ + N E L+ L+ LK A + ++T S L+SV
Sbjct: 1449 QKRKIYKDLSAVQAQERKANY----EMRALKHKLRKSILKEAQIVVTTLSGCGGDLYSVC 1504
Query: 362 MEPL--------------NFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPA 404
E L + +VIDEAAQ E + IPLQL G K ++ GD QLPA
Sbjct: 1505 AESLSAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPKQLPA 1563
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V S V+++ + S+FERL GY +L+ QYRMHP I FP+ +FY+ K+ + +
Sbjct: 1564 TVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDYKLLNGVDMS 1623
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK 522
+S F GPY F ++ G+E S N E +++L K +
Sbjct: 1624 SKSAP--FHESHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEF 1681
Query: 523 EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-- 580
IGI++PY Q+ ++ + + +++ ++DGFQG E D++++STVR+
Sbjct: 1682 VAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGREVDILVLSTVRATHS 1741
Query: 581 -----NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
N IGF+++ +R+NVALTRA+ LW+LGN RTL R + W ALV DA R+
Sbjct: 1742 DPDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREV-- 1798
Query: 636 NADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSENFLKSFRK 687
I+ VK+ P + +F + N SEN K+F K
Sbjct: 1799 -----------IIPVKR----------PYNNMFGEYVMEQNHSENLPKNFPK 1829
Score = 40.8 bits (94), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL 74
L S+ N+SQ QA+ + I LI GPPGTGKT+T+ ++ LL
Sbjct: 1192 LKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGLL 1242
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ E + IPL + G K
Sbjct: 417 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQ 475
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 476 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 535
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 536 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 591
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 592 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 651
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 652 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 710
Query: 631 RQCFFN 636
R +F
Sbjct: 711 RGRYFQ 716
>gi|27764657|gb|AAO23082.1| putative component of a tRNA splicing complex [Oryza sativa
Japonica Group]
Length = 788
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ E + IPL + G K
Sbjct: 417 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQ 475
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 476 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 535
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 536 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 591
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 592 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKE 651
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 652 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 710
Query: 631 RQCFFN 636
R +F
Sbjct: 711 RGRYFQ 716
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 163/274 (59%), Gaps = 14/274 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1457 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1514
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGPYSFIN 485
S +LL +QYRMHPSIS FP+S FY+ +++D + KR H P+ PY F +
Sbjct: 1515 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWHQLEPL-APYKFFD 1571
Query: 486 VFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAIQ 541
+ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ ++
Sbjct: 1572 IISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKMR 1630
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTR 600
++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALTR
Sbjct: 1631 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1690
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
A+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1691 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1723
>gi|365991108|ref|XP_003672383.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
gi|343771158|emb|CCD27140.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
Length = 2238
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 176/304 (57%), Gaps = 22/304 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1555 VIVDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1612
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSST---VRKRSYEKRFLHGPMYGPYSFI 484
S +LL++QYRMHP IS FP+ FY+ K++D + + +R + + + PY F
Sbjct: 1613 NSSPYLLNVQYRMHPDISKFPSEEFYQGKLKDGPSMDIINRRPWHQMV----PFAPYKFF 1668
Query: 485 NVFGGREEFIEHSCR--NMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
++ G+++ + N+ E+ V +++ L N + A ID K IG++SPY Q+
Sbjct: 1669 DISTGKQQQNSKTMSYVNLEEIQVAIELVDKLFNEFDAKIDFTGK--IGVISPYREQMQR 1726
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVAL 598
++ + + S ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVA
Sbjct: 1727 MRREFTRYFGGSISKSIDFNTIDGFQGQEKEIILISCVRADDTKTSVGFLKDFRRMNVAF 1786
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD----DDKDLGKAILAVKKEL 654
TRA+ +WILG+ ++L + K +W+ L++DA +R C A + K L + LA KE+
Sbjct: 1787 TRAKTSMWILGHQQSLLKNK-LWKHLINDARSRDCLVVAKPGFLNGKTLSNSRLAELKEI 1845
Query: 655 DELD 658
++D
Sbjct: 1846 PQMD 1849
Score = 43.5 bits (101), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 40/144 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV--------------------- 66
LN SQA+A++ + LI GPPGTGKTKT+
Sbjct: 1303 LNTSQAEAIVHTVSN------EGFSLIQGPPGTGKTKTILGIVGYFLSTRKILSSNIIKT 1356
Query: 67 ----SMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
S L + L K + L+C P+N A+ E+ R +KE V D LF P +++
Sbjct: 1357 PTDGSKLSIDQLLKKQKVLICAPSNAAVDEICIR----LKEGV-YDKNGRLFKP--NLVR 1409
Query: 123 LGNNERLKVDSGVEEIYLDYRVKR 146
+G ++ + V ++ + L+ V R
Sbjct: 1410 IGRSDVVNV--AIKNLTLEELVDR 1431
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 163/274 (59%), Gaps = 14/274 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1468 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1525
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGPYSFIN 485
S +LL +QYRMHPSIS FP+S FY+ +++D + KR H P+ PY F +
Sbjct: 1526 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWHQLEPL-APYKFFD 1582
Query: 486 VFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAIQ 541
+ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ ++
Sbjct: 1583 IISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKMR 1641
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTR 600
++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALTR
Sbjct: 1642 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1701
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
A+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1702 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1734
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1586 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1643
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + P+ PY F
Sbjct: 1644 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-APYKFF 1699
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1700 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1758
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1759 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1818
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1819 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1852
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 174/318 (54%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1526 ARETEIKRRQIQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 1584
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + + +SLF R+ + K HLL +QYRMH
Sbjct: 1585 PLKY-GCNKCILVGDPKQLPPTVLSQSAAKYGYDQSLFVRMQK-NHPKDVHLLDMQYRMH 1642
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
P IS FP+ FYE ++D + + + + + + GPY F +V G +E + S N
Sbjct: 1643 PEISRFPSKEFYEGLLQDGADMARLRLQP-WHQSVLLGPYRFFDVKGSQERGPKNQSLVN 1701
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
EV V M++ + + D IGI++PY AQ+ +++K +Y S ++ +
Sbjct: 1702 EEEVKVAMQLYMRFRSDYRDIDLTGKIGIITPYKAQLQRLRQKFVERYGESITEQIEFNT 1761
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 1762 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALVQGE-F 1820
Query: 621 WEALVHDANARQCFFNAD 638
W L+ DA R + N +
Sbjct: 1821 WAKLIEDAKQRDRYTNGN 1838
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 40/148 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL ++
Sbjct: 1318 LNPGQARAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNTGAVQ 1371
Query: 81 ------------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
LVC P+N A+ EL R+ VK + F + ++L
Sbjct: 1372 ISRPGAGPTNGTAPSKKLLVCAPSNAAVDELVLRLKAGVK------TMNGTFHKI-EVLR 1424
Query: 123 LGNNERLKVDSGVEEIYLDYRVKRLADC 150
LG ++ +++ V+++ LD VK D
Sbjct: 1425 LGRSD--VINAAVKDVTLDELVKARMDA 1450
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + P+ PY F
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-APYKFF 1700
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1701 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1759
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1760 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1819
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1820 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ E + IPL + G K
Sbjct: 477 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQ 535
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 536 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 595
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 596 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 651
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 652 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 711
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 712 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 770
Query: 631 RQCFFN 636
R +F
Sbjct: 771 RGRYFQ 776
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 195/378 (51%), Gaps = 22/378 (5%)
Query: 275 EELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLED 334
++L E L D L I + Y K ++ + + F+E S +++L +
Sbjct: 1524 KDLAERLKQQEDNKLRNEITKLNYTREKYNNDLKLA-KDEERRFHEQY--SNTKRNLYIN 1580
Query: 335 LLKSFCLKRASLFLSTASSS-YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
++ R+ + LST S S Y A + + +++DEAAQ E + IPL+ +K
Sbjct: 1581 IIG-----RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKC 1634
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
+L GD QLP SKV+ + + SLF+RL G + +L QYRMHP IS FP+ FY
Sbjct: 1635 ILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFY 1694
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKIL 511
++ D VR+ + +GP F ++F E S RN EV + I+
Sbjct: 1695 RGELEDGKNVREYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIV 1754
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
L + ++K+ L IG+++PY +Q V + Y N V+V +IDGFQG E+D
Sbjct: 1755 DQLISNYPNTKD-LEIGVITPYKSQSVDLFNAFKG-YQN-----VEVSTIDGFQGKEKDF 1807
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD-ANA 630
+I S+VR+++G SIGFLS+ +R+NV LTRA++ + ILGN+ L+ W LV+D
Sbjct: 1808 VIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYSMVILGNSSLLSNNDD-WGNLVNDLRQT 1866
Query: 631 RQCFFNADDDKDLGKAIL 648
C+F K + K +L
Sbjct: 1867 NNCYFPI-SSKSIDKGVL 1883
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM------- 76
L S+LN+SQ A+ S L+ + L+ GPPGTGKTKT+ LL + +
Sbjct: 1368 LRSSLNESQLSAIASTLKNL-----GGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKS 1422
Query: 77 --KFRTLVCTPTNVAIKELAARVVK 99
+ LVC P+N A+ E+A R+ K
Sbjct: 1423 HSDPKILVCAPSNAAVDEIALRIKK 1447
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1589 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + P+ PY F
Sbjct: 1647 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-APYKFF 1702
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1703 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1761
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1762 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1821
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1822 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1855
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + P+ PY F
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-APYKFF 1700
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1701 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1759
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1760 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1819
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1820 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 9/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ E + IPL + G K
Sbjct: 609 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQ 667
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 668 VFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 727
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 728 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 783
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 784 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 843
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 844 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 902
Query: 631 RQCFFN 636
R +F
Sbjct: 903 RGRYFQ 908
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 164/275 (59%), Gaps = 16/275 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFI 484
S +LL +QYRMHPSIS FP+S FY+ +++D + KR + + P+ PY F
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQL---EPL-APYKFF 1700
Query: 485 NVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAI 540
++ GR+E S NM E+ V ++++ L++ + D+K + IGI+SPY Q+ +
Sbjct: 1701 DIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKM 1759
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALT 599
+++ + ++ +IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALT
Sbjct: 1760 RKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALT 1819
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ +W+LG+ R+L + K +W L+ DA R C
Sbjct: 1820 RAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 218/417 (52%), Gaps = 45/417 (10%)
Query: 311 LRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLH 358
+R+L NEL N + +DL ++ L ++ + ST S S +L
Sbjct: 1485 IRELSRQLNELGRERDLMRERNSVNYRNRDLDRRNAQARTLAKSDIICSTLSGSAHDVLS 1544
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
S+ ++ + ++IDEA Q E S IPL+ G + ++ GD QLP V S ++ + +
Sbjct: 1545 SLGVK-FDTVIIDEACQCTELSSIIPLRYGG-RRCIMVGDPNQLPPTVLSGAASSFKYNQ 1602
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLF R+ + +LL +QYRMH SIS FP+ FY+++++D V + +R H Y
Sbjct: 1603 SLFVRMEK-NITPYLLDVQYRMHSSISKFPSMEFYKSRLKDGPEVD--TLNQRPWHELKY 1659
Query: 479 G-PYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAW--IDSKEKLSIGIVSPY 533
PY F ++ GRE+ + N+ E+ V M+++ L+ + ID K IG++SPY
Sbjct: 1660 SRPYKFFDILTGREQQSAKTMSYVNLDEIKVAMELVEYLFHKFDKIDFTSK--IGVISPY 1717
Query: 534 SAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSK 592
Q ++ + S++ + V +IDGFQG E+++IIIS VR+++ S+GFL + +
Sbjct: 1718 KEQASRMRREFLSRFGGTITREVDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLRDFR 1777
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC-------FFNADDDK---D 642
R+NVALTRA+ +WILG+ ++L + K +W L+ DA R C F N+ + K
Sbjct: 1778 RMNVALTRAKTSMWILGHQKSLVKNK-LWNRLITDAQQRGCMEVACPGFLNSRNHKAQET 1836
Query: 643 LGKAILAVKKEL--DELDELLN--PESRLFRSQRWKVNFSENFLKSFRKLTSDPTKK 695
L K L D+ D L N PES+ +R S+N RK+T D K+
Sbjct: 1837 LEKYRARNDPSLLNDDYDPLANMKPESKTPSKRR-----SDNLDAHPRKMTFDEKKR 1888
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 177/311 (56%), Gaps = 19/311 (6%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSS-YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
D+L+ +++ L+ A + +T S+S + L A ++IDEAAQ E S IPL+
Sbjct: 1474 DVLKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKY- 1532
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-----LLSIQYRMHPS 443
G + V+ GD QLP V SK S + + +SL+ R+ + +H LLSIQYRM+P
Sbjct: 1533 GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRM----FKQHNESACLLSIQYRMNPE 1588
Query: 444 ISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRN 500
IS FP+ +FY +K+ D S V R + + P G Y F NV G S N
Sbjct: 1589 ISRFPSKFFYNSKLLDGPNMSAVTSRPWHE----DPQLGIYRFFNVHGTEAFSNSKSLYN 1644
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
+ E S ++ + L + +++ + IG+V+PY +QV ++ + KY + + + +
Sbjct: 1645 VEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHT 1704
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
+DGFQG E+D+II S VRS+ G IGFL + +R+NVALTRA+ L+I+GN++ L ++ +
Sbjct: 1705 VDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLM-QEDI 1763
Query: 621 WEALVHDANAR 631
+ +L+ DA R
Sbjct: 1764 FYSLIEDAKTR 1774
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 179/337 (53%), Gaps = 21/337 (6%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEP-LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L +A + ST S S M+ + +VIDEA Q E + IPL+ G K ++ GD
Sbjct: 1495 LSQAQIICSTLSGSAHDFLATMDTSFDTVVIDEACQCIELSAIIPLRY-GCKRCIMVGDP 1553
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYL-GYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLP V S+ + E + +SLF R+ + S +LL++QYRMHP IS FP+ FY K+
Sbjct: 1554 NQLPPTVLSQAAAEYKYEQSLFVRMMNVHPKSVYLLNVQYRMHPQISVFPSKEFYNGKLI 1613
Query: 459 D---SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNL 514
D + T RS+ K+ PY FI+V G + S N E V+ ++ L
Sbjct: 1614 DGEGTETKNTRSWHKKI------PPYCFIDVTGKESTNTSNKSLFNRAEAQAVVSLIDAL 1667
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
D IG++SPY QVV +++ + K+ + G + V ++DGFQG E+D+I+
Sbjct: 1668 LGLDRDFNFASKIGVISPYKQQVVLLRDMILRKFGRNIG--IDVNTVDGFQGQEKDVILF 1725
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
S VR++ +GFL++ +R+NVALTRA+ L I+G+A L+ S+W LV D+ R F
Sbjct: 1726 SCVRADETKGVGFLADVRRLNVALTRAKSTLLIVGHASNLS-GHSLWRHLVQDSKDRNVF 1784
Query: 635 FNADDDKDLGK-----AILAVKKELDELDELLNPESR 666
F D GK +L K +++ +L PE R
Sbjct: 1785 FTQRSLLDGGKGDVTVGVLPSGKGKRKIEGILPPEKR 1821
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 24/339 (7%)
Query: 312 RKLQSSFNELNLPSAV-------------EKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
++LQ+ NE NL E DLL + LK+A + +T S S H
Sbjct: 1305 KELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSG--H 1362
Query: 359 S-VAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
VA LNF ++IDEAAQ E ++ IPL+ G K +L GD QLP V SK +
Sbjct: 1363 DLVAHSSLNFSTVIIDEAAQAVELDTIIPLRY-GAKKCILVGDPNQLPPTVLSKKAASLN 1421
Query: 416 FGRSLFERLSYLGYSKH--LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFL 473
+ +SLF R+ +S LLSIQYRMHP IS FP+ FY++++ D + +++ ++ +
Sbjct: 1422 YSQSLFVRIQK-NFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKT-QQVWH 1479
Query: 474 HGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPY 533
P + Y +V G S N+ EV ++ ++ L + D IG+++PY
Sbjct: 1480 VNPKFTQYRLFDVRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPY 1539
Query: 534 SAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
+Q+ ++ KY S + + ++DGFQG E+D+I S V+S + IGFL + +R
Sbjct: 1540 RSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRR 1599
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
+NVALTRAR L I+GN TL + +W +LV DA +R+
Sbjct: 1600 LNVALTRARSSLLIIGNMETL-KTDDLWGSLVDDALSRK 1637
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 35/138 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT----VSMLLVIL---------- 73
+N+ QA+A++ L D+ LI GPPGTGKTKT +S LLV L
Sbjct: 1130 VNEPQAKAIMCAL-----DNNG-FTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQ 1183
Query: 74 ----LQMKFRTLVCTPTNVAIKELAARVVK-LVKESVERDCRDALFFPLGDILLLGNNER 128
+ K + L+C P+N A+ E+ R+ + + E+ E+ + P ++ +GN E
Sbjct: 1184 QSKSTESKQQILLCAPSNAAVDEVLLRLKRGFLLENGEK------YIP--RVVRIGNPET 1235
Query: 129 LKVDSGVEEIYLDYRVKR 146
+ V V ++ L+Y+ ++
Sbjct: 1236 INV--SVRDLSLEYQTEK 1251
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 198/387 (51%), Gaps = 20/387 (5%)
Query: 254 ATLISLLDSFETLLFEDNLVSEELEELLSHSVDEG-LSKSIVGIKYLLHKRRSECHFVL- 311
A + L +L E + ++LE+ + S+D G L I + L + R
Sbjct: 1373 ADMDELRQKHRAILDERDAKLKQLEDARAKSIDPGTLQSEIDSLNATLRETRRSLDLKRD 1432
Query: 312 RKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLV 369
+K +SS N L ++++++++ A + +T S + +L ++ ++ ++
Sbjct: 1433 QKKESSRNAEVLKRRIQQEIMDE---------AHIICATLSGTGHDLLRNINVD-FETVI 1482
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
IDEAAQ E + IPL+ G + +L GD QLP V S+ + + + +SLF R+ +
Sbjct: 1483 IDEAAQSVELSALIPLKF-GCEKCILVGDPKQLPPTVLSREAAKFSYEKSLFVRMQE-NH 1540
Query: 430 SK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
K HLLSIQYRMHP IS FP FY++++ D +++ E + P+Y PY F N+
Sbjct: 1541 PKDVHLLSIQYRMHPMISSFPRKQFYDSELEDGENMKELRTEV-WHKNPIYAPYRFFNIA 1599
Query: 488 GGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK 547
G HS N E + + L + + IGI++PY Q+ ++
Sbjct: 1600 GQESAGGLHSLVNRQEAQSALSLYQRLTADFPQTNFDGKIGIITPYKQQINLLKTTFRDV 1659
Query: 548 YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
Y + + + D FQG E D+II S VR++ G IGFLS+ +R+NV LTRA+ L++
Sbjct: 1660 YGENICDTIDFNTTDAFQGRERDIIIFSCVRASQEGGIGFLSDVRRMNVGLTRAKFSLFV 1719
Query: 608 LGNARTLTRKKSVWEALVHDANARQCF 634
LG++ +L R + +W +LV DA R F
Sbjct: 1720 LGHSTSLMRNR-LWASLVQDAKDRGVF 1745
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 26/92 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--------- 78
+N+ QA+A+LS ++ LI GPPGTGKTKTV ++ LL K
Sbjct: 1236 VNEPQARAILSAVKN------TGFTLIQGPPGTGKTKTVVGIVGALLTPKVGSTVIQIPG 1289
Query: 79 -----------RTLVCTPTNVAIKELAARVVK 99
+ LVC P+N A+ EL R K
Sbjct: 1290 SMNKSPKPTTKKLLVCAPSNAAVDELVLRFKK 1321
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 179/337 (53%), Gaps = 21/337 (6%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEP-LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L +A + ST S S M+ + +VIDEA Q E + IPL+ G K ++ GD
Sbjct: 1495 LSQAQIICSTLSGSAHDFLATMDTSFDTVVIDEACQCIELSAIIPLRY-GCKRCIMVGDP 1553
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYL-GYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLP V S+ + E + +SLF R+ + S +LL++QYRMHP IS FP+ FY K+
Sbjct: 1554 NQLPPTVLSQAAAEYKYEQSLFVRMMNVHPKSVYLLNVQYRMHPQISVFPSKEFYNGKLI 1613
Query: 459 D---SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNL 514
D + T RS+ K+ PY FI+V G + S N E V+ ++ L
Sbjct: 1614 DGEGTETKNTRSWHKKI------PPYCFIDVTGKESTNTSNKSLFNRAEAQAVVSLIDAL 1667
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
D IG++SPY QVV +++ + K+ + G + V ++DGFQG E+D+I+
Sbjct: 1668 LGLDRDFNFASKIGVISPYKQQVVLLRDMILRKFGRNIG--IDVNTVDGFQGQEKDVILF 1725
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
S VR++ +GFL++ +R+NVALTRA+ L I+G+A L+ S+W LV D+ R F
Sbjct: 1726 SCVRADETKGVGFLADVRRLNVALTRAKSTLLIVGHASNLS-GHSLWRHLVQDSKDRNVF 1784
Query: 635 FNADDDKDLGK-----AILAVKKELDELDELLNPESR 666
F D GK +L K +++ +L PE R
Sbjct: 1785 FTQRSLLDGGKGDVTVGVLPSGKGKRKIEGILPPEKR 1821
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 152/263 (57%), Gaps = 8/263 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
F++IDEA Q E E +P+ + G +H +L GD QL +V+S+ + RSLFERL
Sbjct: 536 FVLIDEATQAIEPECLLPM-IKGAQHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQ 594
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG L +QYRMHP ++ FP++ FYE +++ T+ R++ F P FINV
Sbjct: 595 LGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINV 654
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEK 543
G +E + S + + + + +Y + ++ + IGI++PY Q +++ ++
Sbjct: 655 QG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYIISYLQR 712
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
G N ++V S+DGFQG E+D IIIS VRSN+ IGFL+N +R+NV +TRAR
Sbjct: 713 NGQLPYNQYR-DIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARF 771
Query: 604 CLWILGNARTLTRKKSVWEALVH 626
L I+GNAR L K ++W +++
Sbjct: 772 GLIIIGNARVLC-KDNLWNNMLN 793
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 13 EGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT----VSM 68
E + + P+L LN QA AV L K+ + LI GPPGTGKT T V
Sbjct: 354 ENIPQKLSAPNLPD-LNVYQADAVKKAL-------KSPLSLIQGPPGTGKTVTSATIVHQ 405
Query: 69 LLVILLQMKFR--TLVCTPTNVAIKELAARVVK 99
L+ L + K R LVC P+N+ + +LA ++ K
Sbjct: 406 LVKALEKQKQRGQILVCAPSNIVVDQLAEKINK 438
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 158/273 (57%), Gaps = 12/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E + IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1547 VIVDEACQCTELSAIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFGYNQSLFVRMEK- 1604
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
S +LL +QYRMHP+IS FP++ FY +++D V + + P+ PY F ++
Sbjct: 1605 NSSPYLLDVQYRMHPAISKFPSAEFYNGRLKDGPDVEILNIRPWHKNAPL-TPYRFFDIV 1663
Query: 488 GGREEFIEHSCR--NMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
G+E S N E+ V +++ L+N Y+ +D K IG++SPY Q + ++
Sbjct: 1664 TGKESQNAKSMSYVNTEEIRVAIELVENLVNKYERELDFSGK--IGVISPYKEQAMTMRR 1721
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRA 601
+ S + S V +IDGFQG E+++IIIS VR+++ S+GFL + +R+NVALTRA
Sbjct: 1722 QFRSHFGASIAQYVDFNTIDGFQGQEKEIIIISCVRADDSKTSVGFLRDFRRMNVALTRA 1781
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ +WILG+ ++L + K +W L+ DA R C
Sbjct: 1782 KTSMWILGHQKSLVKNK-LWRNLITDAQGRGCL 1813
>gi|218195430|gb|EEC77857.1| hypothetical protein OsI_17113 [Oryza sativa Indica Group]
Length = 1127
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 114/155 (73%), Gaps = 2/155 (1%)
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
S K L + +A+ +K K+++G++ PY+AQV+AIQ+KLG + VK+ S+DGF
Sbjct: 787 SQYQKYLEDQKEAYSKTKNKVTVGVICPYTAQVLAIQQKLGKMKFDPV--IVKINSVDGF 844
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QGGEED+II+STVRSN+ G++GFLSN +R NV+LTRAR+CLWILGNA TL+R S+W L
Sbjct: 845 QGGEEDIIILSTVRSNSDGAVGFLSNRQRTNVSLTRARYCLWILGNATTLSRSGSIWADL 904
Query: 625 VHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
V DA RQCFFNA+ DKD+ + + K E +++ +
Sbjct: 905 VRDAKDRQCFFNANSDKDISRVLAKHKIETNKVKD 939
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 134/244 (54%), Gaps = 42/244 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQ-LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPT 86
LN+SQ A+L+C+ M ++ ++ LIWGPPGTGKTKT+S+LL ++ +M TL C PT
Sbjct: 256 LNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPT 315
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
N+A+K++A+R +K++KES +R C LGD+LL GN +R+ VD ++EIYL RV+
Sbjct: 316 NLAVKQVASRFLKVIKESSDRAC-------LGDVLLCGNKQRMCVDGNLKEIYLHDRVRT 368
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKECGKEADV 206
L CF P+TGW H +S+ D +N S Y Y++++ KE D
Sbjct: 369 LLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQ-------------------KEGDS 409
Query: 207 SDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETL 266
F + R RF LR C F RIP + + L S L+S+ +
Sbjct: 410 -----LTFYSYTRKRFNATYPELRRC-FKEMKRIPSTF---------SDLKSYLESYTSP 454
Query: 267 LFED 270
L E+
Sbjct: 455 LLEE 458
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 110/165 (66%), Gaps = 8/165 (4%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQ-LIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPT 86
LN+SQ A+L+C+ M ++ ++ LIWGPPGTGKTKT+S+LL ++ +M TL C PT
Sbjct: 648 LNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPT 707
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
N+A+K++A+R +K++KES +R C LGD+LL GN +R+ VD ++EIYL RV+
Sbjct: 708 NLAVKQVASRFLKVIKESSDRAC-------LGDVLLCGNKQRMCVDGNLKEIYLHDRVRT 760
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDIN 191
L CF P+TGW H +S+ D +N S Y Y++++ S+ N
Sbjct: 761 LLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQKEAYSKTKN 805
>gi|403415166|emb|CCM01866.1| predicted protein [Fibroporia radiculosa]
Length = 1926
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 9/283 (3%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L+F +VIDEAAQ E S IPL+ + ++ GD QLP V+S+ + + + +S
Sbjct: 1511 LEQLDFELIVIDEAAQAIELSSLIPLKYR-CRRCIMVGDPQQLPPTVKSQEACKFGYNQS 1569
Query: 420 LFERLS-YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPM 477
LF R + HLLSIQYRMHP IS P+ FY+ K++D + ++ KR H
Sbjct: 1570 LFVRFQRQRPEAVHLLSIQYRMHPDISLVPSQLFYDRKLQDGPDMATKT--KRPWHSNEK 1627
Query: 478 YGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
G Y F +V GGREE HS N E V + + L + + +GIVS Y Q
Sbjct: 1628 LGTYHFFDVAGGREEAGRNHSFINRAECQVAIALFNRLRREYSTFDFDYKVGIVSMYRGQ 1687
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVN 595
+ ++ ++ V ++DGFQG E+D+II+S VR+ N ++GFL + +R+N
Sbjct: 1688 IFELRRMFEQRFGADISSIVDFHTVDGFQGQEKDVIILSCVRAGPNVQTVGFLRDMRRMN 1747
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
VALTRA+ L++LG+A TL R W ++ DA R N D
Sbjct: 1748 VALTRAKSSLFVLGHAATLERSDGTWRQIISDARERSRLVNVD 1790
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 27/92 (29%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-------- 78
++N+ QA+A+L L+ D A IQ GPPGTGKT T+ L+ L +
Sbjct: 1272 SVNEPQAKAILYSLK---ADGFALIQ---GPPGTGKTSTICGLVHAFLSRRPKPATLVAV 1325
Query: 79 -------------RTLVCTPTNVAIKELAARV 97
+ L+C P+N AI E+A R+
Sbjct: 1326 GRTTNMPNKEPVKKVLLCAPSNAAIDEIAFRL 1357
>gi|50293955|ref|XP_449389.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528703|emb|CAG62365.1| unnamed protein product [Candida glabrata]
Length = 1979
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 185/346 (53%), Gaps = 27/346 (7%)
Query: 311 LRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLH 358
+R+L S NEL N + +DL ++ L + ST S S +L
Sbjct: 1478 IRELTKSINELGREKDEMREKNAINYRNRDLDRRNAQAQVLASCDIICSTLSGSAHDVLA 1537
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
++ M+ +VIDEA Q E + IPL+ G K ++ GD QLP V S ++ + +
Sbjct: 1538 TLGMK-FETVVIDEACQCTELSAIIPLRY-GSKRCIMVGDPNQLPPTVLSGAASNFKYNQ 1595
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPM 477
SLF R+ LL +QYRMHP+IS FP++ FY+ ++ D + S KR H
Sbjct: 1596 SLFVRMEK-NSKPFLLDVQYRMHPAISKFPSAEFYDGRLMDGPDME--SLNKRIWHEQEP 1652
Query: 478 YGPYSFINVFGGRE----EFIEHSCRNMVEVSVVM-KILLNLYKAWIDSKEKLSIGIVSP 532
+ PY F ++ G++ + + ++ + +EV++ M L LY ID K IG++SP
Sbjct: 1653 FKPYKFFDITSGQQVQNVKTMSYTNKEEIEVAIEMVDKLFRLYDNKIDFSNK--IGVISP 1710
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNS 591
Y Q+ ++ + + S V +IDGFQG E+++IIIS VR+++ S +GFL +
Sbjct: 1711 YKEQIQRMRREFMRYFGGSITKFVDFNTIDGFQGQEKEIIIISCVRADDSQSGVGFLKDF 1770
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+R+NVALTRAR +WILG+ ++L RK +W L+ DA R C A
Sbjct: 1771 RRMNVALTRARTSIWILGHQKSL-RKSKLWSHLIDDAEGRGCLQQA 1815
Score = 43.1 bits (100), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 31/100 (31%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
LN+SQA+A+++ + + LI GPPGTGKTKT+ ++ L +
Sbjct: 1295 LNESQARAIVNTV------ISSGFSLIQGPPGTGKTKTILGIVGYFLSLRNATPTGTIQA 1348
Query: 77 --------------KFRTLVCTPTNVAIKELAARVVKLVK 102
K + L+C P+N A+ E+ R+ +K
Sbjct: 1349 PTDKKSTTLDQMLKKPKILICAPSNAAVDEICLRLKSGIK 1388
>gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae]
Length = 757
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 182/315 (57%), Gaps = 17/315 (5%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
+DL ++ L + + ST S S +L ++ ++ + ++IDEA Q E S IPL+
Sbjct: 73 RDLDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIK-FDTVIIDEACQCTELSSIIPLR 131
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISC 446
G K ++ GD QLP V S ++ + +SLF R+ S +LL +QYRMHPSIS
Sbjct: 132 YGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISK 189
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGPYSFINVFGGREE--FIEHSCRNMV 502
FP+S FY+ +++D + KR H P+ PY F ++ GR+E S NM
Sbjct: 190 FPSSEFYQGRLKDGPGMD--ILNKRPWHQLEPL-APYKFFDIISGRQEQNAKTMSYTNME 246
Query: 503 EVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V ++++ L++ + D+K + IGI+SPY Q+ ++++ + ++ +
Sbjct: 247 EIRVAIELVDYLFRKF-DNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNT 305
Query: 561 IDGFQGGEEDLIIISTVRSNN-GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
IDGFQG E+++I+IS VR+++ S+GFL + +R+NVALTRA+ +W+LG+ R+L + K
Sbjct: 306 IDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK- 364
Query: 620 VWEALVHDANARQCF 634
+W L+ DA R C
Sbjct: 365 LWRDLIEDAKDRSCL 379
>gi|452824849|gb|EME31849.1| tRNA-splicing endonuclease positive effector-related protein
[Galdieria sulphuraria]
Length = 895
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 190/366 (51%), Gaps = 35/366 (9%)
Query: 302 KRRSECHFVLRKLQSSFNELNLPSAVEK---DLLEDLLKSFCLKRASLFLSTASSSYMLH 358
+++ E + L +LQ N L L + E+ ++ +L S+ +K A + T S +++L
Sbjct: 498 EKKMENYERLEQLQRDLNRLTLVFSKERSKDQIISELTLSY-VKTAQIVFCTLSGAFLLF 556
Query: 359 SVAMEP--------------LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
S++ + ++IDEAAQ E IP L IK VL GD QLPA
Sbjct: 557 SLSGNSAISHTRNQMDKYFWFDTVIIDEAAQATEPACLIPF-LFQIKRCVLIGDPQQLPA 615
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV- 463
V S +G+SL ER +G +L QYRMHP+IS FPN YFY+ +++ ++V
Sbjct: 616 TVFSCGDLGTAYGQSLLERFCRVGRPVIMLDTQYRMHPAISLFPNQYFYQGLLKNDTSVC 675
Query: 464 ---RKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEVSVVMKILLNLYKAW 518
R FL P+ GPY+ I++ G+E S N E ++ +I +
Sbjct: 676 NDNRSHICHSDFLK-PLLGPYAVIDISDGKEFRSSSSGSFYNEKEADIIARIYKYFQHKY 734
Query: 519 I-------DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+ ++ K +GIV+PY Q++++++ +++ G V++ S+D FQG E+D
Sbjct: 735 LPKETNETNTPFKKRVGIVTPYRRQLLSLRQAFEKHHISLRG--VEIDSVDAFQGREKDW 792
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR + IGF+ + +R+NVA+TRA++ L I+GN + L+ + W ALV +A R
Sbjct: 793 IILSCVRCSFEKGIGFVRDIRRMNVAITRAKYSLLIVGNMKALSHHSTDWFALVENAKQR 852
Query: 632 QCFFNA 637
N
Sbjct: 853 GVLLNG 858
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 176/344 (51%), Gaps = 28/344 (8%)
Query: 314 LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVID 371
L+ FN+ P L + L++A + T S + S +E NF +++D
Sbjct: 650 LERMFNDRTGPE-------RSLAQQRALRQADVVCCTCSGA---GSDMLEKFNFSAVLLD 699
Query: 372 EAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK 431
EA+Q+ E S +PL G VL GD QLP V + + A SLF+RL+ +G
Sbjct: 700 EASQVTEPSSLVPLS-KGCHQLVLVGDHKQLPPTVTCRDAGNAGLSTSLFDRLANMGVKP 758
Query: 432 HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV----- 486
LL +Q+RMHP++S FP+ FY+ +++ + R R F P +F+ V
Sbjct: 759 KLLDVQFRMHPALSRFPSDAFYDGRVKSGTLARDRPAPSGFAWPNAGVPIAFVPVGVPGV 818
Query: 487 ---FGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
+GG E + S N E VV+ +L L +A E +G+V+PY+AQV I+
Sbjct: 819 SGAYGGHERREGNGSFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRR 878
Query: 543 KLGSKYVNSA------GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+L ++ + + V+V S+DG+QG E++++++STVRSN+ G++GF+S+++R NV
Sbjct: 879 QLRNRGIQTGIDRETGKPGVEVSSVDGYQGREKEVMVVSTVRSNDRGTMGFVSDARRCNV 938
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
LTRA+ + + G+ TL W + A A A D
Sbjct: 939 TLTRAKRGVVVCGDPNTLASDHVTWGRWLRWAAAGGLVIGAPGD 982
>gi|213405365|ref|XP_002173454.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212001501|gb|EEB07161.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1719
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 165/304 (54%), Gaps = 5/304 (1%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSS-YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
D+ ++ LK + ST S S + L + A N ++IDEAAQ E ++ IPL+
Sbjct: 1346 DMTRRKIQQALLKECDVVCSTLSGSGHELVARANLTFNTVIIDEAAQAVELDTIIPLKY- 1404
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCF 447
G VL GD QLP + SK + + + +S+F R+ + LLSIQYRMHP IS F
Sbjct: 1405 GAARCVLVGDPNQLPPTILSKKAVKLNYSQSMFVRIQNNFPEQLELLSIQYRMHPEISQF 1464
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVV 507
P+ FY +++ D V ++ + + P++G Y +V G ++ S N E V
Sbjct: 1465 PSCQFYNSRLLDGDNVATKTLQP-WHKNPLFGQYRVFDVRGTEKQSKTFSLYNPEEAKSV 1523
Query: 508 MKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGG 567
+ + ++ IGIV+PY +Q+ ++ KY + + +IDGFQG
Sbjct: 1524 TDLFDLMTSSFPTVDFASKIGIVTPYRSQLKELRRAFSRKYGRAFASKFDMNTIDGFQGQ 1583
Query: 568 EEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
E+D+II+S VRS GGSIGFL + +R+NVALTRAR L+I+GN TL +W +L+ +
Sbjct: 1584 EKDIIILSCVRSETGGSIGFLRDFRRLNVALTRARSSLFIVGNVETLF-SDDLWGSLLAN 1642
Query: 628 ANAR 631
A R
Sbjct: 1643 AKER 1646
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 24/88 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+ QA A+L+ L LI GPPGTGKTKT+ ++ LL
Sbjct: 1140 VNEPQAHAILASL------DNVGFTLIQGPPGTGKTKTIVGIVSALLLDLNNYHITRPDS 1193
Query: 75 -----QMKFRTLVCTPTNVAIKELAARV 97
+ K + L+C P+N A+ E+ R+
Sbjct: 1194 KQDSEKTKQKILLCAPSNAAVDEVILRL 1221
>gi|242083574|ref|XP_002442212.1| hypothetical protein SORBIDRAFT_08g016427 [Sorghum bicolor]
gi|241942905|gb|EES16050.1| hypothetical protein SORBIDRAFT_08g016427 [Sorghum bicolor]
Length = 422
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 135/250 (54%), Gaps = 53/250 (21%)
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
L ++V+ +++ EA +GRSLFERL +G+ KHLL++QYRMHP IS FP FY+ I D++
Sbjct: 119 LQSVVKIQIAKEAKYGRSLFERLCEIGWHKHLLNVQYRMHPDISRFPMKVFYDETIIDAT 178
Query: 462 TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDS 521
+++ K F+ G ++G YSFI V G E S +N+VE V I+ L K
Sbjct: 179 ---EKTSAKIFI-GDIFGNYSFIIVEYGIEHQTGQSVQNVVEAVVAATIVSKLSK----- 229
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
G E+D+II+S VR+N
Sbjct: 230 --------------------------------------------GDEKDIIILSIVRNNK 245
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
G+IGFL + R NVALTRAR CLWILGN +TLT+ KSVW LV DA R CFF+A D
Sbjct: 246 FGNIGFLDSGGRANVALTRARDCLWILGNEKTLTKSKSVWSELVQDAKGRSCFFDARADL 305
Query: 642 DLGKAILAVK 651
+L K I + K
Sbjct: 306 ELDKVISSFK 315
>gi|403214571|emb|CCK69072.1| hypothetical protein KNAG_0B06440 [Kazachstania naganishii CBS 8797]
Length = 2187
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 156/269 (57%), Gaps = 10/269 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E + IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1549 VIIDEACQCTELSAIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1606
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINV 486
+LL++QYRMHP IS FP+ FY+ K+ D + + KR H P PY F ++
Sbjct: 1607 NSQPYLLNVQYRMHPDISSFPSKEFYDGKLTDGPGMEE--INKRPWHSCPPLSPYKFFDI 1664
Query: 487 FGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKE-KLSIGIVSPYSAQVVAIQEK 543
GR+E S N EV +K++ +L+K + ++ IGI+SPY Q++ ++ +
Sbjct: 1665 AMGRQEQNLKSMSFTNAEEVRAALKLIDHLFKKFDNTVNFTGKIGIISPYREQMLRMRRE 1724
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRAR 602
++ S + +IDGFQG E+++IIIS VR+++ S+GFL + +R+NVA TRA+
Sbjct: 1725 FTRQFGGSITKYIDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLKDFRRMNVAFTRAK 1784
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANAR 631
+WILG+ R+L + K +W L+ DA R
Sbjct: 1785 TSMWILGHQRSLVKNK-LWRNLIEDARNR 1812
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 40/144 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
LN SQA+A+++ + K LI GPPGTGKTKT+ ++ L
Sbjct: 1297 LNKSQAEAIVNTV------IKDGFSLIQGPPGTGKTKTILGIIGYFLSTRRTAPSNVIKI 1350
Query: 77 --------------KFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
K + L+C P+N A+ E+ R+ +S D LF P +++
Sbjct: 1351 PGEKATLSLEQQLKKQKILICAPSNAAVDEICLRL-----KSGVYDAHGKLFQP--NLVR 1403
Query: 123 LGNNERLKVDSGVEEIYLDYRVKR 146
+G ++ + V ++++ L+ V+R
Sbjct: 1404 IGRSDVVNV--AIKDLTLEELVER 1425
>gi|302921016|ref|XP_003053198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734138|gb|EEU47485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2035
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 172/320 (53%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E +L ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1526 AREMELRRRQVQQEILNSAQVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1584
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + + +SLF R+ S HLL +QYRMHP
Sbjct: 1585 PLKY-GCCKCILVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQNHPKSVHLLDMQYRMHP 1643
Query: 443 SISCFPNSYFYENKIRDSSTV---RKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHSC 498
IS FP+ FYE ++ D + R++ + K L GPY F +V G +E S
Sbjct: 1644 EISMFPSREFYEGQLADGQNMHELRQQPWHKSAL----LGPYRFFDVQGVQERGHRGQSL 1699
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V M++ K + IGI++PY AQ+ ++ + S+Y + ++
Sbjct: 1700 VNTKELDVAMQLYDRFSKEYQQCDLTGKIGIITPYKAQLYELRNRFRSRYGEAITNIIEF 1759
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1760 NTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1819
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ DA AR + D
Sbjct: 1820 -FWRKLIEDAQARDRYTKGD 1838
>gi|403367834|gb|EJY83741.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1199
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 155/285 (54%), Gaps = 21/285 (7%)
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+ + + FL+IDEA Q E + IP +L G +L GD+ QLPA S S + RS
Sbjct: 756 IVKDQVEFLIIDEACQCIEPSTLIPFEL-GPARVILVGDQNQLPATTFSDNSERTKYSRS 814
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY- 478
FERL GY +++L IQYRMHP I +P+ FYEN+I D T+ R Y
Sbjct: 815 FFERLLDNGYQRYMLQIQYRMHPVIRQYPSQTFYENRITDDKTISTREIPPVIESIKTYF 874
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKE------------KLS 526
P F ++ +E E S N E + ++ L + SK K
Sbjct: 875 TPSVFFDLINSQETLAETSKSNNEEAQFTLNLIQLLKEISNQSKSAAQQKSNSFDFLKNK 934
Query: 527 IGIVSPYSAQVVAIQEKLGS--KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-- 582
IGI++PY +QV +++++ + + S +++ ++D +QG E+D+II + VRSN+
Sbjct: 935 IGIITPYKSQVKILKDQIAPWLRSIGSRLQDIEINTVDAYQGREKDIIIFNCVRSNSSNQ 994
Query: 583 --GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
S+GFL + +R+NVA+TRA+H L+++GN+ TL R ++ W+ LV
Sbjct: 995 LKNSLGFLVDKRRMNVAITRAKHFLFVVGNSNTLNRDQT-WKGLV 1038
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 8 CSMQSEGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVS 67
C + + F N SQ +A++ + M D + LI GPPGTGKT T++
Sbjct: 500 CEYHKNTIQMQQFVQQFGGKFNPSQREALVEVTK-MVDDQ---LLLIQGPPGTGKTHTIT 555
Query: 68 MLLVILLQMKF-RTLVCTPTNVAIKELAARV 97
++ +L++ + LVC P+N A+ E+ R+
Sbjct: 556 GIISMLIRSGVEKILVCAPSNAAVDEIITRI 586
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 168/297 (56%), Gaps = 15/297 (5%)
Query: 341 LKRASLFLSTASSSYM-LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
LKR+++ +T SSS L VA + LVIDEA Q E+ + IPL+ + K VL GD
Sbjct: 234 LKRSNVVCATLSSSAKELIKVANIDFDILVIDEACQSVETSTLIPLKFNPTK-VVLVGDP 292
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP V +SN + +SLF RL Y LL++QYRMHP+I FPN YFY+ +++
Sbjct: 293 KQLPPTV---ISNCKPYEQSLFVRLQK-TYQSVLLNVQYRMHPTIVEFPNQYFYDKRLQT 348
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
+V+KR + + P SFI V G S N+ E + I+ L K
Sbjct: 349 HKSVKKRENP----YQNVVPPISFIQVNGEERTDSYFSFYNVAEARYIGNIISELMKNVK 404
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IGI++PY AQ+ I+E L + F V V ++DGFQG E+D+I+ISTV+S
Sbjct: 405 NYDLSNKIGIITPYKAQMKKIKEVLLGIRKDILDF-VCVNTVDGFQGQEKDVILISTVKS 463
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
N IGFLS+ +R+NV++TRA+H L I+GN + L+ + W++++ + FN
Sbjct: 464 KN---IGFLSDLRRINVSITRAKHSLIIIGNTKVLSTSNA-WKSMLSHYRKKNLVFN 516
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 20/85 (23%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL---------------VI 72
LN SQ A+ + A LI GPPGTGKTK + L+ +
Sbjct: 87 LNGSQQIAIKNVYTSA-----AFFSLIHGPPGTGKTKMIVSLIESLFSAPIISALKSKMF 141
Query: 73 LLQMKFRTLVCTPTNVAIKELAARV 97
+ + R L+C P+N A+ ELA R+
Sbjct: 142 ITNREPRILICAPSNAAVDELAKRI 166
>gi|430813344|emb|CCJ29314.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1924
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 169/306 (55%), Gaps = 17/306 (5%)
Query: 341 LKRASLFLSTASSS-YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L A + ST S S Y + ++IDEAAQ E + IPL+ G K +L GD
Sbjct: 1513 LTNADIICSTLSGSGYEFFGNLAFDFSTVIIDEAAQCIELSTIIPLRY-GCKLCILVGDP 1571
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLP V S+++ + +SLF R+ S H+LSIQYRMHP IS FP+ +FY N++
Sbjct: 1572 NQLPPTVFSQMATNYSYEQSLFVRMQKNCPSSVHMLSIQYRMHPCISQFPSKFFYSNRLI 1631
Query: 459 DSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
+ + +++ KR H ++GPY F ++ G +E S N++E + I Y A
Sbjct: 1632 NDEGIEEKT--KRSWHQVDLFGPYRFFDIHGYEDE-TSRSPFNLMEARATLLI----YDA 1684
Query: 518 WIDSKEKLS----IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
I S ++ GI++PY Q+ I+E KY +S + ++DGFQG E+D+I+
Sbjct: 1685 IIRSFPSINFNGYFGIITPYKQQLNKIKELFIKKYGDSILKNIDFNTVDGFQGQEKDIIM 1744
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
+S VRS+ G IGFLS+ +R+NV+LTRA+ + ILGN TL+ W +L+ DA R
Sbjct: 1745 LSCVRSSAKG-IGFLSDIRRMNVSLTRAKSSMIILGNVETLS-GHFYWRSLIEDAEQRGL 1802
Query: 634 FFNADD 639
DD
Sbjct: 1803 LTKFDD 1808
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 23/98 (23%)
Query: 17 NETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV-SMLLVILLQ 75
NE L+ +N QA+A++ + LI GPPGTGKT+T+ M+ L +
Sbjct: 1289 NEIQSAMLAYNVNKPQAEAIVGV------TNSTGFHLIQGPPGTGKTRTILGMINAFLSK 1342
Query: 76 MKFRT----------------LVCTPTNVAIKELAARV 97
K ++ LVC P+N AI ++ R+
Sbjct: 1343 SKNKSACLGKVQKDSPVSSKILVCAPSNAAIDQIVLRL 1380
>gi|242057435|ref|XP_002457863.1| hypothetical protein SORBIDRAFT_03g016948 [Sorghum bicolor]
gi|241929838|gb|EES02983.1| hypothetical protein SORBIDRAFT_03g016948 [Sorghum bicolor]
Length = 245
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
+++ E FGRSLFERLS LG+ KH+L+ QYRMHP IS FPN FY+ KI D V Y
Sbjct: 44 EIARENEFGRSLFERLSGLGFPKHMLNTQYRMHPFISQFPNQMFYDGKIIDGPNV--EDY 101
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA-----W----- 518
+L G MYG YSFI+V G EE +N+VE +VV I+ L + W
Sbjct: 102 NNTYLDGHMYGTYSFIHVEDGFEENSNQGSKNIVEAAVVANIVGRLVEVPSMFLWSKTTT 161
Query: 519 --IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
K+K S+GIVS Y+AQV+A+QE++ S Y +V+V ++D QG E+D+II+ST
Sbjct: 162 TCTKKKKKTSVGIVSAYAAQVIALQERVQS-YKQHDFLSVEVCTVDSCQGSEKDIIILST 220
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRA 601
VR N GG+IGFL+ KR NVALTRA
Sbjct: 221 VRHNRGGNIGFLNCDKRTNVALTRA 245
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 13/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S S +E + F ++IDEAAQ E + I
Sbjct: 1550 AREMEMRRRQVQQEILNNAQVLCATLSGSGHEMFRNLEDVEFETVIIDEAAQCVELSALI 1609
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + + +SLF R+ S HLL +QYRMHP
Sbjct: 1610 PLKY-GCYKCILVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQNHPRSVHLLDMQYRMHP 1668
Query: 443 SISCFPNSYFYENKIRDSSTV---RKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE ++ D + R++ + K L GPY F +V G +E + S
Sbjct: 1669 EISLFPSREFYEGQLADGQNMHELRQQPWHKSAL----LGPYRFFDVQGVQERGHKGQSL 1724
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V +++ + + IGI++PY AQ+ ++ + S+Y + ++
Sbjct: 1725 VNTKELDVAIQMYDRFSNEYRECDLTGKIGIITPYKAQLYELRNRFRSRYGENITSIIEF 1784
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1785 NTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1844
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ DA AR + N D
Sbjct: 1845 -FWRKLIEDAQARDRYTNGD 1863
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 166/303 (54%), Gaps = 17/303 (5%)
Query: 339 FC---LKRASLFLSTASSSYMLH-SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
FC L A + ST +SS S M+ + L++DEAAQ E + IPL+L G++ +
Sbjct: 734 FCEKILNEAEIICSTLNSSGSEKLSKYMDQIELLIVDEAAQCTEPSNIIPLRL-GVEKMI 792
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QL A S S + RSLFER+ + H L+IQYRM I FP+ FY+
Sbjct: 793 LIGDPKQLAATTFSPSSTTGFYNRSLFERILDNNFQPHFLNIQYRMDSEIRKFPSFEFYQ 852
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL 514
NK+ D +V +R + + M F+++ G+E+ S N E ++V++ L+N
Sbjct: 853 NKLIDHESVIQRKLPENYFKKQML----FLDIIDGQEKRDNTSYINEKEANLVIQ-LINS 907
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI---DGFQGGEEDL 571
K ++ +IG++S Y AQV IQ + K++S+ D FQG E+D+
Sbjct: 908 IKEQFKTQ---TIGVISSYKAQVKLIQTLIKQSNTRLKDIDNKILSVNTVDSFQGQEKDI 964
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II S VRS+ IGFL++ +R+NVALTRA+ L+++GN TL+ K +W L+ + R
Sbjct: 965 IIFSCVRSSECKGIGFLNDGRRINVALTRAKFALFVIGNGLTLS-KGQLWRNLLQNMQER 1023
Query: 632 QCF 634
Q +
Sbjct: 1024 QLY 1026
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 26/107 (24%)
Query: 14 GVWNETFGPSLSST-------------LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGT 60
G W F +S++ N SQA ++ L+Q + I L+ GPPGT
Sbjct: 507 GSWTAQFRNQVSNSEYLTKFFKLVDQKFNKSQANSIKEILQQEKG-----ISLLQGPPGT 561
Query: 61 GKTKTVSMLL-----VILLQMKF---RTLVCTPTNVAIKELAARVVK 99
GKT T+ +L + + KF + L+C P+N AI E+ R+++
Sbjct: 562 GKTHTLIGILSGAYEYMKMTDKFPRKKILICAPSNAAIDEIILRIMR 608
>gi|330917057|ref|XP_003297659.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
gi|330935060|ref|XP_003304815.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311318413|gb|EFQ87087.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311329531|gb|EFQ94249.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
Length = 1967
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 172/316 (54%), Gaps = 16/316 (5%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
D D + L A + ST S S M ++ +E + +++DEAAQ E + IPL+
Sbjct: 1483 DARRDKAIAAILNDAHVVCSTLSGSGHNMFRTIEVE-FDTVIVDEAAQCVEMSALIPLKY 1541
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISC 446
G +L GD QLP + SK + + +SLF R+ + HLL QYRMHP IS
Sbjct: 1542 -GCAKCILVGDPKQLPPTIFSKEAARFRYAQSLFMRMQQNHPNDVHLLDTQYRMHPEISL 1600
Query: 447 FPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMV 502
FP+ FY+ K+ D +++RK+ + + L GPY F +V G +++ S N+
Sbjct: 1601 FPSQTFYDGKLLDGGDMASLRKQPWHQSSL----LGPYRFFDVKGQQQKAPSGKSLMNIA 1656
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E++V +++ L + D K IGI++PY +Q+ I+++ Y + + + D
Sbjct: 1657 EINVALQLYNRLTSDYPDYNFKGKIGIITPYKSQLQEIKQRFMKAYGQTIIEDIDFNTTD 1716
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
FQG E ++II S VR+N G IGFL + +R+NV LTRA+ LW+LGN+ +L + W
Sbjct: 1717 AFQGRESEIIIFSCVRANGG--IGFLDDVRRMNVGLTRAKSSLWVLGNSASL-QSGEFWN 1773
Query: 623 ALVHDANARQCFFNAD 638
L+ +A AR+ F + D
Sbjct: 1774 KLIVNAQARKRFTDGD 1789
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 42/158 (26%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKAT--------IQLIWGPPGTGKTKTVSMLLVIL 73
PS T DSQ Q ++S KA LI GPPG+GKTKT++ ++ +
Sbjct: 1253 PSPLLTYKDSQIQPLISNYNVNMAQGKAIKSAIDNDGFTLIQGPPGSGKTKTITAIVGAI 1312
Query: 74 LQMKFRT--------------------LVCTPTNVAIKELAARVVKLVK--ESVERDCRD 111
L FR LVC P+N A+ EL R + +K ER
Sbjct: 1313 LSGSFRNRGTNIAVPGQPQSDAAPKKILVCAPSNAAVDELCMRFRQGIKTLNGEERQI-- 1370
Query: 112 ALFFPLGDILLLGNNERLKVDSGVEEIYLDYRV-KRLA 148
I+ LG +E +K + ++++ LD V KRL
Sbjct: 1371 -------SIVRLGRSEAVK--ASIQDLTLDELVDKRLG 1399
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 172/301 (57%), Gaps = 8/301 (2%)
Query: 341 LKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L A + ST S S ++ ++A+ + ++IDEA Q E + IPL+ G K ++ GD
Sbjct: 1544 LSEAQVLCSTLSGSAHDLVANLAVS-FDQVIIDEACQCLELSAIIPLRY-GCKKCIMVGD 1601
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGY-SKHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S+ + + +SLF R+ S ++L +QYRM+P IS FP++ FY++K+
Sbjct: 1602 PNQLPPTVLSQAAASYNYEQSLFVRMQKNNPESVYMLDVQYRMNPMISKFPSAEFYDSKL 1661
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKILLNLYK 516
+D + + + P+ PY F ++ G ++ + S N E V +++ L +
Sbjct: 1662 KDGEGMLELNTRPWHKDDPL-TPYRFFDISGKHQKNALTQSLFNRDEARVALELTEKLMQ 1720
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
D + +GI+SPY QV I+ + +K+ + ++DGFQG E+++II+S
Sbjct: 1721 YLPDGEFSGKVGIISPYKEQVNTIKREFIAKFGRVILNEIDFNTVDGFQGQEKEIIIMSC 1780
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VR++ GS+GFLS+ +R+NVALTRA+ LWILGN +L R+ +VW L+ DA R+C
Sbjct: 1781 VRASESGSVGFLSDFRRMNVALTRAKTTLWILGNEDSL-RRDAVWNRLLADATDRKCVSK 1839
Query: 637 A 637
A
Sbjct: 1840 A 1840
>gi|66827407|ref|XP_647058.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
gi|60475110|gb|EAL73046.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
Length = 4540
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 173/294 (58%), Gaps = 16/294 (5%)
Query: 337 KSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG--IKH 392
K L+ +S+ ST AS S ++ S + +P N +++DEA Q E+ IPL L +K
Sbjct: 3665 KKMILEHSSICFSTLSASGSNLVQS-SFKP-NVVIVDEATQSCETSCIIPLSLGAKSMKK 3722
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
+L GD QLP + SK S G SLFERLS + +L++QYRMHP IS FP+S F
Sbjct: 3723 LILVGDPVQLPPTIFSKESIHCGLGISLFERLSKV-LPVSMLNVQYRMHPLISKFPSSQF 3781
Query: 453 YENKIRDS-STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKIL 511
Y + ++D + V +Y RF YG F +V REE + S +N +E+++V ++
Sbjct: 3782 YHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVFTLI 3841
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
L + ++K+ S GIV+PY Q I++ K +N +++ +ID FQG E+D+
Sbjct: 3842 KKLTQDHPETKQ-YSFGIVTPYKLQRKEIED--AYKQLN-LSLNIEIKTIDSFQGSEKDI 3897
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
+I+S VR+ SIGFLS+ +R+NV++TRA++ L+I+GNA TL + W L+
Sbjct: 3898 MIMSCVRNE---SIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKLDRTWGELI 3947
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK--FRTLV 82
+ TLN+SQ A+ L ++I LI GPPGTGKT T++ L+ I+L + F+ LV
Sbjct: 3553 NQTLNESQLAAINESLVH------SSITLIQGPPGTGKTHTITSLISIILAINPDFKILV 3606
Query: 83 CTPTNVAIKELAARVV 98
C P++ A+ E+A RV+
Sbjct: 3607 CGPSHAAVDEVAKRVI 3622
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 175/320 (54%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1517 AREMEMRRRQVQQEILNSAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1575
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1576 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPRSVHLLDMQYRMHP 1634
Query: 443 SISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE +++D +R++ + + L GPY F +V G +E+ + S
Sbjct: 1635 EISMFPSKEFYEGQLQDGQDMLQLRQQPWHQSAL----LGPYRFFDVEGVQEKGRKGQSL 1690
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V M+I K + IGI++PY AQ+ ++ + S+Y + ++
Sbjct: 1691 VNTRELQVAMEIYDRFSKEYKQCDLTGKIGIITPYKAQLFELRNRFTSRYGENITDIIEF 1750
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1751 NTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1810
Query: 619 SVWEALVHDANARQCFFNAD 638
W+ L+ DA AR + D
Sbjct: 1811 -FWKKLIEDAKARDRYTKGD 1829
>gi|308800562|ref|XP_003075062.1| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
gi|119358871|emb|CAL52334.2| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
Length = 799
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 166/313 (53%), Gaps = 9/313 (2%)
Query: 329 KDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
+++ +DL SF + + + S S + P +++DEA Q E + IPL +
Sbjct: 472 REISDDLAASFVDEAEIVCCTLTSLSKRFFRINSRPFKTIIVDEACQAIEPATLIPLTIY 531
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFP 448
H VL GD QLPA V+S+V+ A + RSLFERL G LLSIQYRMHP I CFP
Sbjct: 532 N-AHCVLVGDPQQLPATVKSRVAKTARYDRSLFERLMEAGVPAKLLSIQYRMHPEIRCFP 590
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR-NMVEVSVV 507
+ FY + D+ + + Y + P + P+ +V G+EE R N E +
Sbjct: 591 SCVFYSGALVDAPKLDQSRYLPAHKYWP-FKPFMVFDVVQGQEERASTLSRYNKNEAVFI 649
Query: 508 MKILLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQG 566
+ +L+ + + K +L I ++S Y Q + L + + V V +ID FQG
Sbjct: 650 VDLLVRYLTLFPLTRKSRLDIMVLSGYREQCTLVHRLLQQTSIVN---CVNVSTIDAFQG 706
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E D+I++S VR+ + IGFL++ +R+NVA+TRAR LW++ T++ K +W+ L+
Sbjct: 707 QESDVIVLSCVRT-SATDIGFLADLRRLNVAITRARCSLWVICKCETVS-KFHIWQLLLK 764
Query: 627 DANARQCFFNADD 639
+A R C+ + D
Sbjct: 765 NAKERGCYTTSLD 777
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 63/213 (29%)
Query: 14 GVWNETFGPSLSSTLNDSQAQAVL----SCLRQMRCDHKAT-IQLIWGPPGTGKTKTVSM 68
G+ N F L STLND Q +A+L R DH + LI GPPGTGKTK ++
Sbjct: 223 GLENSKFATLLKSTLNDPQFEALLLSAHHATRFSCSDHYSVPFSLIQGPPGTGKTKVITS 282
Query: 69 L--LVILLQMKF-------------------------------------RTLVCTPTNVA 89
L + LLQ ++ R L+C P+N A
Sbjct: 283 LANALHLLQFQYYFDSITALISRQSKAQAPSMKRKRTMVHAVDTQTLKPRILICAPSNAA 342
Query: 90 IKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRLAD 149
+ + R++ ++ D + + P D++ L + E V + + +++RVK L +
Sbjct: 343 VDNVLDRIIH--NRFLQMDA--SQYSP--DVMRLVSGE-ANVSMTAQAVSIEHRVKSLVE 395
Query: 150 CFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNE 182
A WS ++ YHT+ +E
Sbjct: 396 MSA--DDWSAWYSRQ----------YHTFTTSE 416
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 169/287 (58%), Gaps = 14/287 (4%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
LSTA + + S ++ L++DEAAQ E + IPL+L G++ +L GD QLPA
Sbjct: 710 LSTAGTDKL--SKFIDSFELLIVDEAAQCTEPSNNIPLRL-GMRKMILIGDPKQLPATTF 766
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
S VS + RSLFER+ + L +QYRMHP I FP+ FY+NK+ D +V +R
Sbjct: 767 SSVSQITHYNRSLFERILDNDFKPFFLDMQYRMHPQIREFPSLNFYDNKLIDHFSVYERL 826
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
F + + FI+V E E S +N E ++++++L N+ A+ S+
Sbjct: 827 IPNNFFNQRVL----FIDV-ESEETKDEKSFQNQTECNMIVEVLKNIKNAYPSQ----SL 877
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
G++ Y AQV I+ ++ + + +++ ++D FQG E D+I+ S VRS++ G+IGF
Sbjct: 878 GVICAYKAQVRLIKLEI-KRQLGDLMDEIQINTVDSFQGQERDVILFSCVRSSSSGNIGF 936
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
L + +RVNVALTRA++ L+I GNA TL + + +W+ L+ + ++R+ +
Sbjct: 937 LQDGRRVNVALTRAKNALFIFGNAITLGQCQ-LWKNLLLNLHSRKLY 982
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL-----VILLQMKF 78
++ N SQA A+ + Q R I L+ GPPGTGKT T+ LL + + KF
Sbjct: 496 INQNYNFSQATAIQQIILQDRG-----ISLLQGPPGTGKTHTLIGLLSGVYEYMKIMNKF 550
Query: 79 ---RTLVCTPTNVAIKELAARVVK 99
+ L+C P+N AI E+ R+++
Sbjct: 551 PKKKILICAPSNAAIDEIIFRILQ 574
>gi|361125646|gb|EHK97679.1| putative Helicase SEN1 [Glarea lozoyensis 74030]
Length = 1377
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 165/299 (55%), Gaps = 9/299 (3%)
Query: 344 ASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
A + ST S S M +++E ++IDEAAQ E + IPL+ G +L GD Q
Sbjct: 953 AHVLCSTLSGSGHDMFKHLSIE-FETVIIDEAAQCIELSALIPLKY-GCSKCILVGDPEQ 1010
Query: 402 LPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
LP V S+ + + +SLF R+ HLL QYRMHP IS FP+ FY+ ++ D
Sbjct: 1011 LPPTVLSRSAQSYGYEQSLFVRMQKNHPQDVHLLDTQYRMHPDISSFPSQQFYKGRLLDG 1070
Query: 461 STVRKRSYEKRFLHGP-MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
+ K ++ H + GPY F +V G + + HS N+ E++ M++ L +
Sbjct: 1071 DGMAK--LRRQAWHASTILGPYRFFDVEGVQTQGAGHSFINVPELNAAMQLYQRLKTDYQ 1128
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IGI++ Y AQ+ A++++ +++ S ++ + D FQG E ++II S VR+
Sbjct: 1129 NIDFTGKIGIITTYKAQLNALKDRFQNRFGESIFNEIEFNTTDAFQGREREIIIFSCVRA 1188
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
+ G IGFLS+ +R+NV LTRA+ LW+LG++R+L R+ W L+ DA R+ + D
Sbjct: 1189 KSTGGIGFLSDIRRMNVGLTRAKSSLWVLGDSRSL-RQGEFWNKLIEDAKTRKKYSGGD 1246
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 43/147 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT----VSMLLVILLQM------- 76
LN Q+QA+LS + LI GPPG+GKTKT V LL LQ
Sbjct: 724 LNKGQSQAILSA------NDNDGFTLIQGPPGSGKTKTIIAMVGALLTQALQQQNAQPRA 777
Query: 77 -----------------KFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGD 119
K + L+C P+N A+ EL R +KE ++ L P
Sbjct: 778 LAPMPGRADKSTPSIGPKKKLLICAPSNAAVDELVVR----LKEGIQ-----PLSGPHQK 828
Query: 120 ILLLGNNERLKVDSGVEEIYLDYRVKR 146
I ++ ++GV+++ LD V+R
Sbjct: 829 INVIRIGRSDVANAGVQDVMLDELVRR 855
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 174/317 (54%), Gaps = 8/317 (2%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1532 AREMEMRRRQVQQEILNSAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1590
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1591 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHP 1649
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNM 501
IS FP+ FYE +++D + + ++ + + GPY F +V G +E+ + S N
Sbjct: 1650 EISMFPSKEFYEGQLQDGQDMLQLRHQP-WHQSALLGPYRFFDVEGVQEKGRKGQSLVNT 1708
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
E+ V M++ K + IGI++PY AQ+ ++ + S+Y + ++ +
Sbjct: 1709 RELQVAMEMYDRFSKEYKQCDLTGKIGIITPYKAQLFELRNRFTSRYGENITDIIEFNTT 1768
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + + W
Sbjct: 1769 DAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE-FW 1827
Query: 622 EALVHDANARQCFFNAD 638
+ L+ DA AR + D
Sbjct: 1828 KKLIEDAKARDRYTKGD 1844
>gi|212526670|ref|XP_002143492.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
gi|210072890|gb|EEA26977.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
Length = 2105
Score = 169 bits (429), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 194/350 (55%), Gaps = 25/350 (7%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K+R++ + + NE+ A DL ++ + A + +T S S M
Sbjct: 1467 LLKKKRTQLSQEIDNTRDRNNEI----ARNNDLTRRRIQQEIVDGAHVICATLSGSGHEM 1522
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++ ++ ++IDEAAQ E + IPL+ G +L GD QLP V SK ++ +
Sbjct: 1523 FQNLNID-FETVIIDEAAQSIELSALIPLKY-GCAKCILVGDPKQLPPTVLSKEASRFQY 1580
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRF 472
+SLF R+ S HLL IQYRMHP+IS FP+ FY+ ++D + +R R +
Sbjct: 1581 EQSLFVRMQSNHPNDVHLLDIQYRMHPAISQFPSVTFYDGLLQDGPDMAKLRARPWH--- 1637
Query: 473 LHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIG 528
+ + PY F +V G + + HS N+ E++V M++ LL +K++ S + IG
Sbjct: 1638 -NSQLLSPYRFFDVQGLHQSASKGHSLINIAELNVAMQLYERLLADFKSYDFSGK---IG 1693
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
I++PY Q+ ++ + ++Y NS V+ + D FQG E ++II S VR++N G IGFL
Sbjct: 1694 IITPYKGQLREMRTRFAARYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKG-IGFL 1752
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
S+ +R+NV LTRA+ LW+LGN+++L + + W+ L+ D+ R + + D
Sbjct: 1753 SDIRRMNVGLTRAKSSLWVLGNSQSLIQGE-FWKKLITDSRQRNVYTDGD 1801
>gi|297735762|emb|CBI18449.3| unnamed protein product [Vitis vinifera]
Length = 2154
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
Query: 368 LVIDEAAQLKESESTIPLQL--SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+VIDEAAQ E + IPLQL S ++ GD QLPA V S V+++ + S+FERL
Sbjct: 1635 VVIDEAAQALEPATLIPLQLLKSSGTRCIMVGDPKQLPATVLSSVASKFRYQCSMFERLQ 1694
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
GY +L+ QYRMHP I FP+ +FY++K+ + + + F GPY F +
Sbjct: 1695 RAGYPVTMLTKQYRMHPEICRFPSLHFYDSKLLNGENMSSKLAP--FHETEGLGPYVFFD 1752
Query: 486 VFGGREEFIEHSCR----NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
V G+E +S N E +++L K IGI++PY Q+ ++
Sbjct: 1753 VVDGQESHGRNSGTFSLCNEREADAAVEVLRLFRKRHPSEFVGGRIGIITPYKCQLSLLR 1812
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN---------NGGSIGFLSNSK 592
+ S + +S ++ ++DGFQG E D++++STVR+ N SIGF+++ +
Sbjct: 1813 SRFSSAFGSSITSDMEFNTVDGFQGREVDILVLSTVRAAGPCSAASGINSSSIGFVADVR 1872
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
R+NVALTRA+ LWILGNARTL + W ALV DA R +A
Sbjct: 1873 RMNVALTRAKLSLWILGNARTL-QTNCNWAALVKDAKERNLVISA 1916
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 24/98 (24%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL--------- 74
L S+ N SQ QA+ + + LI GPPGTGKT+T+ ++ LL
Sbjct: 1423 LESSYNSSQLQAISVAIASPDSKKNFDLSLIQGPPGTGKTRTIVAIVSGLLASPLKGVNM 1482
Query: 75 ---------------QMKFRTLVCTPTNVAIKELAARV 97
++ R L+C +N A+ EL +R+
Sbjct: 1483 KNSVDGKQSLKPMGTSVRQRVLICAQSNAAVDELVSRI 1520
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 171/323 (52%), Gaps = 14/323 (4%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
DL + L A + +T S S M +++E +++DEAAQ E + IPL+
Sbjct: 1476 DLNRRRAQEAVLNEAHVICATLSGSGHEMFQGLSIE-FETVIVDEAAQCVEMSALIPLKY 1534
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISC 446
G +L GD QLP V SK + + +SLF R+ + HLL QYRMHP IS
Sbjct: 1535 -GCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQKNHPNDVHLLDTQYRMHPEISL 1593
Query: 447 FPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMV 502
FP+ FY++++ D + +RK+ + + + GPY F +V G + + HS N+
Sbjct: 1594 FPSQTFYDSRLLDGGDMAGLRKQPWHQSMV----LGPYRFFDVKGQQAAAPKGHSLINVA 1649
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E+ V M++ L + D K +GI++PY +Q+ +++ Y S + + D
Sbjct: 1650 EIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQLRELKQSFMQVYGQSIIEDIDFNTTD 1709
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
FQG E ++II S VR++ G IGFL + +R+NV LTRA+ LW+LGN+ +L R + W
Sbjct: 1710 AFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLQRGQ-YWN 1768
Query: 623 ALVHDANARQCFFNADDDKDLGK 645
L+ +A R F + D K L +
Sbjct: 1769 KLIVNAKERNRFTDGDVPKMLNQ 1791
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 26/89 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N +QA+A+ S + D+ A LI GPPG+GKTKT++ ++ +L R
Sbjct: 1271 VNTAQAKAIKSAI-----DNDA-FTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTTISV 1324
Query: 81 -------------LVCTPTNVAIKELAAR 96
LVC P+N A+ EL R
Sbjct: 1325 PGQQRSEAASKKLLVCAPSNAAVDELVMR 1353
>gi|281211277|gb|EFA85442.1| adenylyl cyclase [Polysphondylium pallidum PN500]
Length = 1439
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 166/294 (56%), Gaps = 15/294 (5%)
Query: 337 KSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
K +KR+ + LST S S +L P + +++DE+ Q E + IPL + +
Sbjct: 616 KKIMIKRSRIILSTLSGSGSMILAQPEFYP-SVVIVDESTQSCEPSTLIPLLRNPYSKVI 674
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLP V S +S+ + SLFERL+ + H+L QYRMHP IS FP++ FY
Sbjct: 675 LIGDPKQLPPTVFSTISSRFNYDVSLFERLAKY-FPVHMLDTQYRMHPKISKFPSNQFYS 733
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLN 513
K++D V K Y F P YGP +F ++ +E + I S +N +E+ +V +L
Sbjct: 734 AKLKDGENVVK--YNNSFYTDPKYGPINFYHIPDSQELKTIGKSIKNSLEIRLVFTLLKK 791
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
L + + K +S+GI++PY Q +Q+ +K + V V ++DGFQG E+D+II
Sbjct: 792 LVQDHPEVKS-MSVGIITPYKLQKKELQD---AKSHFNEKMDVVVNTVDGFQGAEKDIII 847
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
S VRS IGFL +++R+NV +TRAR L+I+G+++ L + + W A + +
Sbjct: 848 FSCVRSEK---IGFLKDTRRINVGITRARRALYIVGSSKLLEQDPN-WGAYLRN 897
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI---LLQMK 77
G L + LN SQ A+ L + LI GPPGTGKTKT+ LL I +L M
Sbjct: 499 GTILRNQLNQSQFNAISESLASRH------VSLIQGPPGTGKTKTIISLLAIFNAILPMT 552
Query: 78 FRTLVCTPTNVAIKELAARVVK 99
+ LVC P+NVA+ E+ RV+K
Sbjct: 553 AKILVCAPSNVAVDEVGLRVLK 574
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 195/353 (55%), Gaps = 36/353 (10%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS--SSYML 357
LH + +EC +R+++ L E L L +A++ T S S M
Sbjct: 1701 LHTKSTECFGRIRRMREELRNL-----------ESTLTLAILNKANIIACTLSKAGSGMF 1749
Query: 358 HSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
S+ P F LVIDEAAQ E + IP++ + +L GD QLPA V+S ++ +A
Sbjct: 1750 SSL---PRGFDALVIDEAAQAVELSALIPIR-ERVARVILVGDPKQLPATVKSSLAAQAR 1805
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF-LH 474
+ RSLFERL G + +L +QYRMHP + FP+ FY+ ++ D S V +R R+ L+
Sbjct: 1806 YDRSLFERLVECGLTPSMLRVQYRMHPFMREFPSDRFYDGQLTDGSAVLQRMRNVRWNLY 1865
Query: 475 GPMY-GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLY-KAWIDSKEKL----SIG 528
+Y P+ +V EE + S N E + + +++ +A + +L SIG
Sbjct: 1866 EHLYFQPFLLYHVETSSEESVNGSKCNRDEAKFCVDLCVSMLDEAGRNGAPRLTSQWSIG 1925
Query: 529 IVSPYSAQVVA----IQEKLGSKYVNS-----AGFAVKVMSIDGFQGGEEDLIIISTVRS 579
VSPY QV A +Q + S+++ + A +V+V ++DGFQG E+D+I+ S+VRS
Sbjct: 1926 FVSPYKEQVHALRRQVQRSVLSQWLATSPNAQAAVSVEVNTVDGFQGREKDMIVFSSVRS 1985
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
++ G IGFL + +R+NVA+TRAR+CL+++GN TL R ++ W A V A RQ
Sbjct: 1986 SSRGGIGFLRDIRRLNVAITRARYCLFVVGNTNTLKRDRT-WAAFVKSAEDRQ 2037
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 29 NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
N SQ Q++ + L ++K+ I L+ GPPGTGKT+T+ LL L +K
Sbjct: 1441 NTSQLQSIANVLN----NYKSGISLLQGPPGTGKTRTIMGLLSCFLSLK 1485
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 208/381 (54%), Gaps = 25/381 (6%)
Query: 261 DSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
D +T L ++L S+E+++L + + +S + K + R+ + R++
Sbjct: 1500 DQIKTRLSTESLSSKEIDKLETRLREVNKERSDLAKKLDEQRERASIAYRSREIGRR--- 1556
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
++ +L+D + C A+L + S+ ++ S++++ + ++IDEA Q E
Sbjct: 1557 -----TIQTKILDDA-QVLC---ATL---SGSAHELISSLSVK-FDQVIIDEACQCLELS 1603
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYR 439
+ IPL+ G + ++ GD QLP V S+ ++ + +SLF R+ + S +LL++QYR
Sbjct: 1604 AIIPLRY-GCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRMQTNYPDSVYLLNVQYR 1662
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGPYSFINVFGGR-EEFIEH 496
MHP IS FP++ FY++K++D + +++ KR H P+ PY F ++ + +
Sbjct: 1663 MHPQISQFPSAEFYQSKLKDGPNMEEKN--KRPWHSIKPL-SPYRFFDIASRHTKNELTR 1719
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV 556
S N+ E + ++++ L +GI+SPY Q+ I++ +Y +
Sbjct: 1720 SLFNLEEARICLQLVQKLITLIPQQAFAGKVGIISPYKEQIRTIKDVFVREYGKIILNEI 1779
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
++DGFQG E+++II+S VR++ G++GFLS+ +R+NVALTRAR LWILGN +L R
Sbjct: 1780 DFNTVDGFQGQEKEIIIMSCVRASADGNVGFLSDVRRMNVALTRARTTLWILGNRESLLR 1839
Query: 617 KKSVWEALVHDANARQCFFNA 637
K VW L+ DA R NA
Sbjct: 1840 NK-VWNRLLKDAEQRNAVTNA 1859
>gi|384249658|gb|EIE23139.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1148
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 162/305 (53%), Gaps = 18/305 (5%)
Query: 348 LSTASSSYM-LHSVAMEPLNFLVIDEA----AQLKESESTIPLQ-LSGIKHAVLFGDECQ 401
LS+A + + + +E + ++IDEA AQ E + IPLQ L VL GD Q
Sbjct: 789 LSSAGGELLAIQAGGLEAFDAVIIDEASTLAAQAVEPAALIPLQMLKPDGKVVLVGDPKQ 848
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
LPA V S+ + A RSLFERL G + LL+ QYRMHP+IS +P+S+FY ++D+
Sbjct: 849 LPATVVSREAEAAGLSRSLFERLQQGGVAVSLLAEQYRMHPAISAWPSSFFYSGHLKDAP 908
Query: 462 TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR-------NMVEVSVVMKILLNL 514
V + F P + P++F + G E S N EV + + L
Sbjct: 909 AVLGNARTAPFHRTPCFPPFAFFDCREGEESRGSGSGSGAAASLYNSTEVDLASSLFTGL 968
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
K K S+ ++S Y AQV A+ + + +V+ +IDGFQG E D++I
Sbjct: 969 MKE--HGKALGSVAVLSSYKAQVTALCSHFQRVHGAAKMASVEFATIDGFQGREADVVIF 1026
Query: 575 STV--RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
S V R+++ G +GFL++ +R+NVALTRAR LW++G TL + + W AL+ A A+
Sbjct: 1027 SCVRARASDSGGLGFLADVRRMNVALTRARQSLWVIGRVSTL-QGCAPWAALIKHAAAKG 1085
Query: 633 CFFNA 637
C F A
Sbjct: 1086 CLFAA 1090
>gi|281211278|gb|EFA85443.1| Regulator of nonsense transcripts-like protein [Polysphondylium
pallidum PN500]
Length = 1412
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 162/281 (57%), Gaps = 14/281 (4%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
LS A S ++HS P + +++DE+ Q ES + IPL + +L GD QLP V
Sbjct: 633 LSGAGSQLIIHS-GFRP-SVVIVDESTQSCESSTLIPLLRNPNSKIILIGDPKQLPPTVF 690
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
S +S+ + SLFERL+ + H+L QYRMHP IS FP+ FY +K++D V K
Sbjct: 691 SGISSRFNYDVSLFERLAKY-FPVHMLDTQYRMHPKISKFPSLQFYNSKLKDGENVAK-- 747
Query: 468 YEKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
Y F P YGP +F ++ +E + I +S N +E+ +V +L L + + K +S
Sbjct: 748 YHNSFYTDPKYGPINFYHIPDSQELKTIGNSIMNDLEIRLVFTLLKKLVQDHPEVKS-MS 806
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
+GI++PY Q +Q+ +K + V V ++DGFQG E+D+II S VRS IG
Sbjct: 807 VGIITPYKLQKKVLQD---AKNHFNEKMDVVVNTVDGFQGAEKDIIIFSCVRSE---KIG 860
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
FL +++R+NV +TRAR L+I+G+A+ L + + W A + D
Sbjct: 861 FLKDTRRINVGITRARRALYIVGSAKLLEQDPN-WGAYLRD 900
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVI---LLQMKFRTLVCTPTNVAIKELAARVVK 99
I LI GPPGTGKTKT+ LL I +L+ + LVC P+NVA+ E+ RV+K
Sbjct: 526 ISLIQGPPGTGKTKTIISLLAIFNTILKPTEQILVCAPSNVAVDEVGLRVLK 577
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 14/323 (4%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
DL + L A + +T S S M +++E +++DEAAQ E + IPL+
Sbjct: 1475 DLNRRRAQEAVLNEAHVICATLSGSGHEMFQGLSIE-FETVIVDEAAQCVEMSALIPLKY 1533
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISC 446
G +L GD QLP V SK + + +SLF R+ HLL QYRMHP IS
Sbjct: 1534 -GCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQKNHPDDVHLLDTQYRMHPEISL 1592
Query: 447 FPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMV 502
FP+ FY+ ++ D + +RK+ + + + GPY F +V G + + HS N+
Sbjct: 1593 FPSQTFYDGRLLDGGDMAGLRKQPWHQSMV----LGPYRFFDVKGQQAAAPKGHSLINVA 1648
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E+ V M++ L + D K +GI++PY +Q+ +++ Y S + + D
Sbjct: 1649 EIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQLRELKQSFMQVYGQSIIEDIDFNTTD 1708
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE 622
FQG E ++II S VR++ G IGFL + +R+NV LTRA+ LW+LGN+ +L R + W
Sbjct: 1709 AFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLQRGQ-YWN 1767
Query: 623 ALVHDANARQCFFNADDDKDLGK 645
L+ +A R F + D K L +
Sbjct: 1768 KLIVNAKERNRFTDGDVPKMLNQ 1790
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 26/95 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N +QA+A+ S + D+ A LI GPPG+GKTKT++ ++ +L R
Sbjct: 1270 VNTAQAKAIKSAI-----DNDA-FTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTAISV 1323
Query: 81 -------------LVCTPTNVAIKELAARVVKLVK 102
LVC P+N A+ EL R +K
Sbjct: 1324 PGQQRSEAASKKLLVCAPSNAAVDELVMRFKDGIK 1358
>gi|303281096|ref|XP_003059840.1| superfamily I helicase [Micromonas pusilla CCMP1545]
gi|226458495|gb|EEH55792.1| superfamily I helicase [Micromonas pusilla CCMP1545]
Length = 1122
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 166/329 (50%), Gaps = 14/329 (4%)
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
L SF + +F + S+S + + + +DEAAQ E E+ IP L G + V
Sbjct: 759 LEASFVDEAEIVFTTLTSASRRVFQKLTHGFDTVFVDEAAQSSEVETLIPF-LHGARRCV 817
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLP+ V S + F RSLFER + LG LLS+QYRMHP I FP+ FYE
Sbjct: 818 LVGDPQQLPSTVLSTAAQGVSFQRSLFERFTSLGAEAVLLSVQYRMHPEIRAFPSRAFYE 877
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKILLN 513
++RDS +V E P+ PY + G+E+ S N E +V+ ++
Sbjct: 878 GRLRDSESVIAAPPESYHASWPLR-PYVLFDASQGKEKRSTVGSVSNPYEALIVVSLVRR 936
Query: 514 LYKA-WIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAG---FAVKVMSIDGFQGG 567
L + W + E + I++PY AQ I++ Y + + + V ++DGFQG
Sbjct: 937 LERTLWRKNGETVDGRCAIITPYKAQRSKIRDAFARVYGDESAMHRLGIVVSTVDGFQGQ 996
Query: 568 EEDLIIISTV-RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E D+II STV G IGFL + KR+NVALTRAR LWI+G L +W+ LV
Sbjct: 997 EADVIIFSTVRGGAGRGGIGFLQDVKRMNVALTRARRSLWIVGRVDALE-GNPMWKDLVD 1055
Query: 627 DANARQCFFNADDDKDLGKAILAVKKELD 655
DA R C D +LG + ++ D
Sbjct: 1056 DARERGCVV---PDSELGDVLEVAGEDYD 1081
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 178/355 (50%), Gaps = 44/355 (12%)
Query: 321 LNLPSAVEKDLLEDLLKSFC--------------------LKRASLFLSTASSSYMLHSV 360
+ P AV +DL+ +++S L++A + +T + + S
Sbjct: 37 IGRPEAVRQDLMPYMIESIAGIDQDCRWSKQQQRSAITNALRQAEVICATCAGA---GSD 93
Query: 361 AMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+E +F +IDEA Q E + IPL G K VL GD+ QLP + S+ + A G
Sbjct: 94 ILEKYSFQACLIDEATQATEPATVIPL-TKGCKQVVLIGDQNQLPPTIISREAEAAGLGE 152
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFER G ++L +QYRMHP+I+ FP+ FY+ ++ + +R F
Sbjct: 153 SLFERFIRAGIRTYMLKVQYRMHPAIALFPSKTFYKGELLSGTPPSQRRAPVGFDWPVPA 212
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQ 536
P +F+NV G E S N E+ V +N+ K E L IG+V+PYSAQ
Sbjct: 213 VPMAFVNVEEGAERSDGSSQTNPAEIQRV----VNIVKKLAGQHEVLPGDIGVVTPYSAQ 268
Query: 537 VVAIQEKLGSKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
AI++ L F AV+V ++DGFQG E+++I+ S R+N G++G
Sbjct: 269 ARAIKKILRGNAPERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCTRANMNGNVG 328
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ--CFFNADD 639
FL++++RVNV LTRA+ L I+G+ +TL + + VW+ + A C +A D
Sbjct: 329 FLADTRRVNVMLTRAKRGLIIVGHMKTLQQDEIVWKGWLKWARESGLICGLSATD 383
>gi|225461912|ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
Length = 831
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 8/306 (2%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEP-LNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + + ++IDEAAQ E + +PL +G K
Sbjct: 455 DSVRSSILSEAAIVFSTLSFSGSSLFSKLNSGFDVVIIDEAAQAVEPATLVPLA-NGCKQ 513
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
L GD QLPA V S ++ + +G SLF+R GY +L QYRMHP I FP+ F
Sbjct: 514 VFLVGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEF 573
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMK 509
Y+ + D V+ ++ R H +GP+ F ++ G+E S N+ EV V+
Sbjct: 574 YDEALEDGPDVKDQTV--RLWHDYRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLL 631
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
+ L + + K + I+SPY QV +E+ + + V + ++DGFQG E+
Sbjct: 632 MYHKLVTRYPELKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDINTVDGFQGREK 691
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
D+ I S VR++ IGF+++ +R+NV +TRAR + ++G+A TL +K W L+ A
Sbjct: 692 DVAIFSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGSASTL-KKDEHWNNLLESAE 750
Query: 630 ARQCFF 635
R C
Sbjct: 751 KRNCLL 756
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 175/321 (54%), Gaps = 14/321 (4%)
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESEST 382
+A E ++ ++ L A + +T S S M ++ +E ++IDEAAQ E +
Sbjct: 1514 AAREVEMKRRQIQQEILNNAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSAL 1572
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMH 441
IPL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMH
Sbjct: 1573 IPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKSVHLLDMQYRMH 1631
Query: 442 PSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHS 497
P IS FP+ FYE ++RD + +R++ + K L GPY F +V G +E S
Sbjct: 1632 PEISLFPSKEFYEGQLRDGQDMAGLRQQPWHKSAL----LGPYRFFDVQGVQERGHRGQS 1687
Query: 498 CRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVK 557
N E+ V +++ K + + IGI++PY AQ+ ++++ ++Y ++
Sbjct: 1688 LVNTRELEVALQMYDRFRKEYSECNLVGKIGIITPYKAQLFELRKRFRARYGEDICDIIE 1747
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
+ D FQG E ++II S VR++ G IGF+++ +R+NV LTRA+ LWILG++R L +
Sbjct: 1748 FNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQG 1807
Query: 618 KSVWEALVHDANARQCFFNAD 638
+ W+ L+ DA +R F D
Sbjct: 1808 E-FWKKLIEDAKSRDRFTQGD 1827
>gi|77552196|gb|ABA94993.1| hypothetical protein LOC_Os11g42900 [Oryza sativa Japonica Group]
Length = 1133
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 195/386 (50%), Gaps = 16/386 (4%)
Query: 249 NFHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL-LHKRRSEC 307
N ++ L+S L E + ++ +E+ + S VG L++ R C
Sbjct: 545 NIEILNKLLSGLSHLEDRIKNSDITQSGVEKEFGLASGIDFSWEEVGCNVAELNEIRMTC 604
Query: 308 HFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF 367
L ++ N + LP ++ LE+ FC++ + + + T S L + ++ ++
Sbjct: 605 ---LGLIEVVMNSIELPQLDDRKDLEE----FCIRHSRIIICTPVCSSQLRELKLDTIDI 657
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
L++D+AAQ+KE + IPL S +H V+FGD L MV+S+V EA + SLF+RL +
Sbjct: 658 LLVDDAAQIKEIDMLIPLSFSP-RHIVMFGDHLHLQPMVKSEVCKEAGYASSLFQRLMHS 716
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
L+ QY M PSIS F + FYE +++D STV+ Y K P+ Y F ++
Sbjct: 717 SSENKRLTKQYMMDPSISQFVSENFYEGRLKDDSTVKSDDYNKLLKEFPVPA-YGFFDIS 775
Query: 488 GGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK 547
G E + + VE SV+M +L L K ++ K+++GI+ Y+ ++ A++ LG K
Sbjct: 776 GVDE--LTGKGKGFVESSVIMFLLQFLCKGRTNAIGKINVGIICLYNNRMDALRNLLGIK 833
Query: 548 YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
Y N ++V S+ D++I+S+V L ++NVA +R+R+CLWI
Sbjct: 834 YENHDRINIEVNSLGNLHEKWYDVVILSSVSDEKAE----LLEGSKMNVAFSRSRYCLWI 889
Query: 608 LGNARTLTRKKSVWEALVHDANARQC 633
+G + L + +W+ L+ A C
Sbjct: 890 IGEGKNLIASEDLWKKLIGYAKNLHC 915
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 160/275 (58%), Gaps = 10/275 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEAAQ E + IPL+ G +L GD QLP V S+ + + + +SLF R+
Sbjct: 1548 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSREAAKFQYEQSLFARMEN- 1605
Query: 428 GYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-GPMYGPYSFI 484
+ K HLL QYRMHP+IS FP+ FY+++++D + + K +R H ++ PY F
Sbjct: 1606 NHKKDVHLLDTQYRMHPAISLFPSKTFYDSRLKDGADMAK--LRRRPWHQSDLFAPYRFF 1663
Query: 485 NVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
+V G + + HS N+ E++V M++ L K IG+++PY Q+ ++ +
Sbjct: 1664 DVQGMSQAAPKGHSLVNIAELNVAMQLYDRLVKDVPKYDFAGKIGVITPYKGQLKELKLR 1723
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
+Y ++ + D FQG E ++II S VR++ G IGFL++ +R+NV LTRA+
Sbjct: 1724 FTQRYGQDITSKIEFNTTDAFQGRESEIIIFSCVRASTHG-IGFLNDIRRMNVGLTRAKS 1782
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
LW+LGN+++L + + W ALV+DA AR + + D
Sbjct: 1783 SLWVLGNSQSLMQGE-YWRALVNDAKARNVYTHGD 1816
>gi|242083582|ref|XP_002442216.1| hypothetical protein SORBIDRAFT_08g016446 [Sorghum bicolor]
gi|241942909|gb|EES16054.1| hypothetical protein SORBIDRAFT_08g016446 [Sorghum bicolor]
Length = 282
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 150/302 (49%), Gaps = 56/302 (18%)
Query: 363 EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFE 422
E + LVIDEAA LKE ES IPL ++G KH VL GD+ QL ++ +S+ +LFE
Sbjct: 8 EQYDILVIDEAAYLKECESMIPLSINGKKHLVLIGDDLQLQSVAKSQ---RPSMDEALFE 64
Query: 423 RLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYS 482
RL +G+ KHLL++QYRMH IS P FY+ I D++ +++ K F+ G ++G YS
Sbjct: 65 RLCEIGWHKHLLNVQYRMHLDISRLPMKVFYDETIIDAT---EKTSAKIFI-GDIFGNYS 120
Query: 483 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
FINV E S +N+VE +V I+ L K
Sbjct: 121 FINVEYAIEHQTGQSVQNVVEAAVAATIVSKLSK-------------------------- 154
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G E+D+II+STVR+N G IGFL + R NVALTRAR
Sbjct: 155 -----------------------GDEKDIIILSTVRNNKFGKIGFLDSCGRANVALTRAR 191
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
CLWILG+ + + +A R CFF+A D +L A A K ++E +
Sbjct: 192 DCLWILGHEQYSHLDSISMVLAIQNAKGRSCFFDARADLELDTAESAEAKSVEEQERYAK 251
Query: 663 PE 664
E
Sbjct: 252 QE 253
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 172/335 (51%), Gaps = 42/335 (12%)
Query: 321 LNLPSAVEKDLLEDLLKSFC--------------------LKRASLFLSTASSSYMLHSV 360
+ P AV +DL+ +++S L+RA + +T + + S
Sbjct: 801 IGRPEAVRQDLMPFMVESIAGIEPGSNMSKDQQYQAINGVLRRAEVICATCAGA---GSD 857
Query: 361 AMEPLNFL--VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+E +F +IDEA Q E + +P+ G K VL GD+ QLP + S+ ++E G
Sbjct: 858 ILERFSFAACLIDEATQATEPATVVPM-TKGCKQIVLIGDQNQLPPTIISRDADERGLGT 916
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFER+ G +L +QYRMHP+I+ FP+ FY N++ + +R + F
Sbjct: 917 SLFERMLSRGIRTFMLKVQYRMHPAIAKFPSQQFYSNELLSGTPPSQRRAPQGFDWPVPA 976
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--IGIVSPYSAQ 536
P +F++ G E S N +E V + L K + E L+ IGIVSPY+AQ
Sbjct: 977 VPLAFVDCPEGEERSDGASQMNTIEAQKV----VTLVKKLMAEHEVLACDIGIVSPYAAQ 1032
Query: 537 VVAIQEKLGSKYVNSAGFA----------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
V AI++ L V F ++V SIDGFQG E+++I+ S R+N G++G
Sbjct: 1033 VRAIKKLLQPNAVKRTRFDAPAAPDSDAAIEVCSIDGFQGREKEVIVFSCTRANLMGNVG 1092
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
FL++ +RVNV LTRAR L I+G+ RTL + VW
Sbjct: 1093 FLADRRRVNVMLTRARRGLIIVGHLRTLRGEPEVW 1127
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP-T 86
+N SQ +A+ + L Q I LI GPPGTGKT T L+ + L+ + ++CT +
Sbjct: 728 MNKSQHEALRAALFQR-------ITLIQGPPGTGKTHTAVALVQMWLKCRTMPILCTSDS 780
Query: 87 NVAIKEL-------AARVVKLVK-ESVERD 108
N+A+ L RV ++ + E+V +D
Sbjct: 781 NIAVDNLVDGLSRAGVRVARIGRPEAVRQD 810
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 155/267 (58%), Gaps = 7/267 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
+++DEAAQ E S IPL+ + +L GD QLP V S V+ + + +SLF RL
Sbjct: 1372 VIVDEAAQSIEISSLIPLKFD-TQRCILVGDPNQLPPTVMSTVAAKYDYQQSLFMRLEKT 1430
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFIN 485
+G +LLSIQYRMHP IS FP+ FY+++++D + K S H P + PY F +
Sbjct: 1431 VGKEVNLLSIQYRMHPEISTFPSKLFYQSRLQDGPGMDKIS--SAIWHALPEFPPYCFYD 1488
Query: 486 VFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
V G+E+ S N+ E + ++ L K IG+++PY QV ++ +
Sbjct: 1489 VRDGQEKMGRGKSIFNVAEADAAVCLVDLLLTKLPTIKFASKIGVITPYKQQVGQLKARF 1548
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
++ N A+ ++DGFQG E++++I S VR+ +G IGFL++ +R+NV LTRA+
Sbjct: 1549 QKRFGNGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCS 1608
Query: 605 LWILGNARTLTRKKSVWEALVHDANAR 631
L++LG+AR+L+R + W LV DA R
Sbjct: 1609 LFVLGHARSLSRSE-YWGDLVRDAEKR 1634
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK---FRTLVCT 84
+N+ QA+A+ S +++ K LI GPPGTGKTKT+ L+V LL + + LVC
Sbjct: 1141 VNEPQAEAIASAIQK-----KKGFSLIQGPPGTGKTKTILALIVSLLDQRQGYSKLLVCA 1195
Query: 85 PTNVAIKELAARV 97
P+N A+ E+ R+
Sbjct: 1196 PSNAAVDEITKRL 1208
>gi|255544500|ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223547219|gb|EEF48714.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 2110
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 190/367 (51%), Gaps = 43/367 (11%)
Query: 305 SECHFVLRKL----QSSFNELNLPSAVEKDLLEDL------LKSFCLKRASLFLSTASSS 354
+E LRKL + F +L+ A EK E++ L+ LK A + ++T S S
Sbjct: 1378 AELEVKLRKLYEQKKQIFKDLSTAQAQEKKTNEEIKNMKHKLRKSILKEAEIVVTTLSGS 1437
Query: 355 ----YMLHSVAMEPLNF-----------LVIDEAAQLKESESTIPLQL--SGIKHAVLFG 397
Y + S +M F ++IDEAAQ E + IPLQL S ++ G
Sbjct: 1438 GGDLYGVCSESMSSYKFGNPSERTLFDAVIIDEAAQALEPATLIPLQLLKSNGTKCIMVG 1497
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
D QLPA V S V+++ + S+FERL G+ +L+ QYRMHP I FP+ +FY+ K+
Sbjct: 1498 DPKQLPATVLSNVASKFLYECSMFERLQRAGHPVTMLTKQYRMHPDICQFPSLHFYDGKL 1557
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR----NMVEVSVVMKILLN 513
+ + + F GPY+F +V G+E ++S N E +++L
Sbjct: 1558 LNGENMSSKLVP--FHETEGLGPYAFYDVIDGQELRGKNSAAFSLYNEREADAAVELLRF 1615
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
K E IGI++PY Q+ ++ +L S + +S ++ ++DGFQG E D++I
Sbjct: 1616 FKKRHPSEFEGGKIGIITPYKCQLSLLRSRLSSAFGSSVIADMEFNTVDGFQGREVDILI 1675
Query: 574 ISTVRSN---------NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
+S+VR+ N SIGF+++ +R+NVALTRA+ LWI GNARTL + W AL
Sbjct: 1676 LSSVRAGEAYTHVNGVNSSSIGFVADVRRMNVALTRAKLSLWIFGNARTLQANHN-WAAL 1734
Query: 625 VHDANAR 631
+ DA R
Sbjct: 1735 IKDAKQR 1741
>gi|222628875|gb|EEE61007.1| hypothetical protein OsJ_14822 [Oryza sativa Japonica Group]
Length = 344
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 147/274 (53%), Gaps = 8/274 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ ++IDEAAQ E + IPL + G K L GD QLPA V S + + +G SLF+R
Sbjct: 5 FDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRF 63
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSF 483
G+ +L IQYRMHP IS FP+ FYE + D + K KR H +GP+ F
Sbjct: 64 QAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK----KRPWHSYSCFGPFCF 119
Query: 484 INVFGGREEFI-EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
+V G + S N EV + + + + + K + ++SPY QV +++
Sbjct: 120 FDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKD 179
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
S + + + + V ++DGFQG E++++I S VR N IGF+S+ +R+NVA+TRAR
Sbjct: 180 HFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRAR 239
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
+ ++G+A TL K W LV A R +F
Sbjct: 240 SAVLVVGSASTLKEDKH-WNNLVESAKERGRYFQ 272
>gi|328871491|gb|EGG19861.1| Regulator of nonsense transcripts [Dictyostelium fasciculatum]
Length = 1534
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 170/297 (57%), Gaps = 18/297 (6%)
Query: 332 LEDLLKSFCLKR-ASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
++DL + + R A + LST S+S ML P + +++DE+ Q E + IPL +
Sbjct: 724 IDDLKRRIMMIRSARIVLSTLSGSASTMLAKAGCRP-SIIIVDESTQSCEPSTLIPLLRN 782
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS-YLGYSKHLLSIQYRMHPSISCF 447
+L GD QLP V S +S+ + SLFERLS YL H+L QYRMHPSIS F
Sbjct: 783 FRSKVILIGDPKQLPPTVFSDISSRFNYDVSLFERLSNYLPV--HMLDTQYRMHPSISKF 840
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE-FIEHSCRNMVEVSV 506
P+ FY+ K++D V K Y F + YGP +F ++ +E+ I S +N +E+ +
Sbjct: 841 PSDQFYQAKLKDGENVVK--YSNSFYNDKKYGPINFYHIPDSQEDTTIGKSIKNNLEIKL 898
Query: 507 VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQG 566
V +L L + + + K K+S+GI++PY Q +E L +K + V V ++DGFQG
Sbjct: 899 VYVLLKKLVQEYPEVK-KMSVGIITPYKLQK---KELLEAKGAFNEKMDVVVNTVDGFQG 954
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
E+D+II S VR+ IGFL +++R+NV +TRAR ++++G + +L + W A
Sbjct: 955 AEKDIIIFSCVRNK---KIGFLRDTRRINVGITRARRAIYVVGYS-SLLEQDPNWGA 1007
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI---LLQMKFRTLVCT 84
LN SQ A+ C+ Q + LI GPPGTGKT T+ LL I +L + + LVC
Sbjct: 619 LNPSQMIAIKQCMIQ------DELTLIQGPPGTGKTTTILSLLGIYHSILPPQCQILVCA 672
Query: 85 PTNVAIKELAARVVK--LVKESVERD 108
P+N A+ E+ R ++ LV E E +
Sbjct: 673 PSNTAVDEIGIRFLRDGLVSEEEENE 698
>gi|242781508|ref|XP_002479814.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
gi|218719961|gb|EED19380.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
Length = 1391
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 193/350 (55%), Gaps = 25/350 (7%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YM 356
LL K+R++ + + N + A DL ++ + A + +T S S M
Sbjct: 763 LLKKKRTQLSQEIDNARDRNNAI----ARNNDLTRRRIQQEIVDGAHVICATLSGSGHEM 818
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
+++++ ++IDEAAQ E + IPL+ G +L GD QLP V SK ++ +
Sbjct: 819 FQNLSID-FETVIIDEAAQSIELSALIPLKY-GCAKCILVGDPKQLPPTVLSKEASRFQY 876
Query: 417 GRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRF 472
+SLF R+ S HLL IQYRMHP+IS FP+ FY+ ++D + +R R +
Sbjct: 877 EQSLFVRMQSNHPNDVHLLDIQYRMHPAISRFPSVTFYDGLLQDGPDMAKLRARPWH--- 933
Query: 473 LHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIG 528
+ + PY F +V G + + HS N+ E++V M++ LL +K+ ID K IG
Sbjct: 934 -NSQLLSPYRFFDVQGLHQSASKGHSLINVAELNVAMQLYERLLTDFKS-IDFSGK--IG 989
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
I++PY Q+ ++ + +KY NS V+ + D FQG E ++II S VR++N G IGFL
Sbjct: 990 IITPYKGQLREMKIRFAAKYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKG-IGFL 1048
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
S+ +R+NV LTRA+ LW+LGN+++L + + W L+ DA R + + D
Sbjct: 1049 SDIRRMNVGLTRAKSSLWVLGNSQSLIQGE-FWGKLITDARQRNLYTDGD 1097
>gi|320580258|gb|EFW94481.1| DEAD-box type RNA helicase [Ogataea parapolymorpha DL-1]
Length = 968
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 154/264 (58%), Gaps = 8/264 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
+VIDEAAQ E + IPL+ G K ++ GD QLP V S+ + + +SLF R+ +
Sbjct: 471 VVIDEAAQCIELSAIIPLRY-GAKRCIMVGDPNQLPPTVLSQKAASFNYEQSLFVRMQNN 529
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFIN 485
+ +LL++QYRMHP IS FP+ FY++K+ D S + +++ R H YGPY F N
Sbjct: 530 HDNAVYLLNVQYRMHPEISKFPSKEFYDSKLLDGSGMAEKT--ARPWHAIQEYGPYRFFN 587
Query: 486 VFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+ G ++ + S N E + ++I+ +L+ + D + IGI+SPY Q+ I+E
Sbjct: 588 IEGSHQQNEQTKSLYNYAEAKIALEIVSDLFALFPDEQWPGKIGIISPYKEQIRCIREVF 647
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNSKRVNVALTRARH 603
K+ + ++DGFQG E+D+++ S VR+ S +GFL + +R+NVALTRAR
Sbjct: 648 VQKFGFPITKEIDFNTVDGFQGQEKDIVLFSCVRAGEQNSGVGFLGDVRRMNVALTRARS 707
Query: 604 CLWILGNARTLTRKKSVWEALVHD 627
LW+LG+ TL K+ W L+ D
Sbjct: 708 SLWVLGSRETLMSNKT-WRDLIDD 730
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV 66
+NDSQA+A+ + HK LI GPPGTGKTKT+
Sbjct: 313 AVNDSQARAIAGTV------HKDGFSLIQGPPGTGKTKTI 346
>gi|66821529|ref|XP_644230.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|75013564|sp|Q86AS0.1|Y4399_DICDI RecName: Full=Probable helicase DDB_G0274399
gi|60472139|gb|EAL70092.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 967
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 163/309 (52%), Gaps = 26/309 (8%)
Query: 336 LKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
+++ L A + +T S S L + + ++IDEAAQ E+ + IP+Q G K V
Sbjct: 555 IRTLVLDEADIVATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQ-HGCKKVV 613
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA + S ++ + + +SLF+RL S H+L+ QYRMH I FP+ +FY+
Sbjct: 614 LVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFYQ 672
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF-------GGREEFIEHSCRNMVEVSVV 507
+ + D + R+ + P +GP F ++ GG F EH C+ +
Sbjct: 673 DLLLDGPNIPSRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECK------MA 724
Query: 508 MKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGG 567
M + K + D IGI+SPY QV+A++E + N G ++ ++DGFQG
Sbjct: 725 MYLFQLFTKVYPDEDFASRIGIISPYRQQVLALREI----FKNYPGISID--TVDGFQGR 778
Query: 568 EEDLIIISTVRS--NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
E ++II S VR+ G IGFLS+ +R+NVALTR R L ILGN + L+ K E +
Sbjct: 779 EREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKALSINKDWNELIQ 838
Query: 626 HDANARQCF 634
H N +Q
Sbjct: 839 HTQNNQQLI 847
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
SST NDSQ A+ S L I LI GPPGTGKT + L+ +LL
Sbjct: 331 FSSTYNDSQLNALTSAL------EGNAITLIQGPPGTGKTHVILGLISVLLH 376
>gi|449533286|ref|XP_004173607.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
isoform 2 [Cucumis sativus]
Length = 165
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 104/138 (75%), Gaps = 9/138 (6%)
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
+SIG+VSPYSAQVV IQ K+G KY N GF VKV S+DGFQGGEED+IIISTV N G S
Sbjct: 1 MSIGVVSPYSAQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGEEDIIIISTVWCNTGSS 59
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLG 644
IGFLS+++R NVALTRAR+CLWILGN +TL++ SVWE LV DA R CFFNA+ +
Sbjct: 60 IGFLSSNQRTNVALTRARYCLWILGNFKTLSKSNSVWEELVMDAKNRGCFFNANAN---- 115
Query: 645 KAILAVKKELDELDELLN 662
A+ K++ ++ LL+
Sbjct: 116 ----AITKDIQQIVPLLD 129
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 167/303 (55%), Gaps = 10/303 (3%)
Query: 341 LKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L +A + +T S S M ++ +E ++IDEAAQ E + IPL+ G +L GD
Sbjct: 1538 LDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALIPLKY-GCSKCILVGD 1595
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENK 456
QLP V S+ + + +SLF R+ ++K HLL +QYRMHP IS FP+ FYE
Sbjct: 1596 PKQLPPTVLSQSAARYGYDQSLFVRMQK-NHAKDVHLLDMQYRMHPEISRFPSKVFYEGL 1654
Query: 457 IRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLY 515
++D + + K + + + GPY F +V G +E + S N E+ V +++
Sbjct: 1655 LQDGADMGKLRLQP-WHQSVLLGPYRFFDVKGSQERGPKNQSLVNEEELKVALQLYRRFR 1713
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ + K IGI++PY AQ+ ++++ KY ++ + D FQG E ++II S
Sbjct: 1714 TDYSNVDLKGKIGIITPYKAQLFRLRQRFTEKYGEGITEEIEFNTTDAFQGRECEIIIFS 1773
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
VR++ G IGF+++ +R+NV LTRA+ LWILG++R L + + W L+ DA R +
Sbjct: 1774 CVRASPTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE-FWAKLIEDAKQRDRYT 1832
Query: 636 NAD 638
N +
Sbjct: 1833 NGN 1835
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 30/99 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL ++
Sbjct: 1317 LNPGQARAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNGGVAL 1370
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVK 102
LVC P+N A+ EL R+ VK
Sbjct: 1371 ARPGGAAPAGSAPSKKLLVCAPSNAAVDELVLRLKAGVK 1409
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 150/269 (55%), Gaps = 21/269 (7%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++IDE+ Q E E IPL L G K VL GD CQL ++ +K EA +SLFERL
Sbjct: 684 YVLIDESTQASEPECLIPLML-GAKQVVLVGDHCQLGPVLLAKKVIEAGLSQSLFERLIN 742
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGPYSFIN 485
LG+ L+ QYRMHPS+S FP+S FYE ++ + + + R Y +F P F N
Sbjct: 743 LGHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKDRVYNDIKFPWPSPNNPMFFYN 802
Query: 486 VFGGRE------EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--- 536
G E FI N +E S KI+ L + + IGI++PY Q
Sbjct: 803 STGAEEISSSGTSFI-----NRMEASTTEKIVTKLLELGTKPHQ---IGIITPYEGQRSF 854
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+V +K G K ++V S+D FQG E+D II+S VRSN+ IGFL + +R+NV
Sbjct: 855 LVNNMQKTG-KLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQGIGFLHDPRRLNV 913
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALV 625
ALTRAR+ L ILGNAR L+R + +W L+
Sbjct: 914 ALTRARYGLIILGNARVLSRDQ-LWNNLI 941
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF----RTLVC 83
LN+SQ A + L K+ + LI GPPGTGKT S ++ +++ + LVC
Sbjct: 518 LNNSQISAAMKVL-------KSPLSLIQGPPGTGKTVVSSFIVHHIVKHAIKKNEKVLVC 570
Query: 84 TPTNVAIKELAARV 97
P+NVAI +L ++
Sbjct: 571 APSNVAIDQLTGKL 584
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 180/346 (52%), Gaps = 10/346 (2%)
Query: 295 GIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLSTA 351
G K L + ++E + ++S F+E + LE L + L A + +T
Sbjct: 422 GDKALATQLKAEIRNLSANVKSKFDEAKGKQKSQHRQLEALRRRARLEILGEADVICTTL 481
Query: 352 SSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
S + ML VA + +VIDEAAQ E + IPL+ G K ++ GD QLP V S+
Sbjct: 482 SGAGHKMLSRVAFD-FETVVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQ 539
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
+++ + +SLF R+ + HLLSIQYRMHP IS FP FY +K++D + + ++
Sbjct: 540 QADKLGYSQSLFARMFERAPQEVHLLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTH 599
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIG 528
+ + + P+ F++ HS N E +V + + L IG
Sbjct: 600 QPWHRY-ELTRPFKFLSTKAPESPGPFHSIINKEEANVALALYGRLRTDHAQENFDYRIG 658
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS-NNGGSIGF 587
IV+ Y AQV +++ +Y + ++DGFQG E+D+II+S VRS SIGF
Sbjct: 659 IVTMYKAQVFELKQTFQQRYGKDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGF 718
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
L + +R+NVA+TRA+ L+I+GNA L R ++WE+LV A R+
Sbjct: 719 LRDGRRLNVAVTRAKSNLFIIGNAEHLRRGDAIWESLVAAAEQREA 764
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+ QA+A+L L LI GPPGTGKTKT+ L+ +
Sbjct: 252 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSRQKGPSTSVQAG 305
Query: 75 --QMKF----RTLVCTPTNVAIKELAARV 97
Q K + L+C P+N AI E+A R
Sbjct: 306 QAQGKVDATKKILLCAPSNAAIDEVAKRA 334
>gi|400600684|gb|EJP68352.1| helicase sen1 [Beauveria bassiana ARSEF 2860]
Length = 3005
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 173/320 (54%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1517 AREVEMKRRQIQQEILNNAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1575
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1576 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPNSVHLLDMQYRMHP 1634
Query: 443 SISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE ++RD + +R++ + + L GPY F +V G +E S
Sbjct: 1635 EISMFPSKEFYEGQLRDGQDMAGLRQQPWHRSAL----LGPYRFFDVQGVQERGRRGQSL 1690
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V +++ K + D IGI++PY AQ+ ++ + ++Y ++
Sbjct: 1691 VNTRELDVALQMYDRFRKDYSDCNLVGKIGIITPYKAQLFELRNRFRARYGEDITDIIEF 1750
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1751 NTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1810
Query: 619 SVWEALVHDANARQCFFNAD 638
W+ L+ DA +R + D
Sbjct: 1811 -FWKKLIEDAQSRDRYTQGD 1829
>gi|189198704|ref|XP_001935689.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187982788|gb|EDU48276.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1954
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 163/292 (55%), Gaps = 14/292 (4%)
Query: 351 ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 410
S +M ++ +E + +++DEAAQ E + IPL+ G +L GD QLP + SK
Sbjct: 1500 GSGHHMFRTIEVE-FDTVIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTIFSKE 1557
Query: 411 SNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKR 466
+ + +SLF R+ + HLL +QYRMHP IS FP+ FY+ K+ D ++VRK+
Sbjct: 1558 AVRFRYAQSLFMRMQQNHPNDVHLLDVQYRMHPEISQFPSQTFYDGKLLDGGDMASVRKQ 1617
Query: 467 SYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
+ + L GPY F +V G +++ S N+ E++V +++ L + + K
Sbjct: 1618 PWHQSSL----LGPYRFFDVKGQQQKATSGKSLMNIAEINVALQLYHRLTSDFPNYNFKG 1673
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
IGI++PY +Q+ I+E+ Y + + + D FQG E ++II S VR+N G I
Sbjct: 1674 KIGIITPYKSQLYEIKERFKRTYGQTIVEDIDFNTTDAFQGRENEIIIFSCVRANGG--I 1731
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
GFL + +R+NV LTRA+ LW+LG++ +L + W L+ +A R+ F +
Sbjct: 1732 GFLDDVRRMNVGLTRAKSSLWVLGDSTSL-QSGEYWRKLILNAQERKRFTDG 1782
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 38/156 (24%)
Query: 22 PSLSSTLNDSQAQAVLS----CLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVIL 73
PS T DSQ Q ++ L Q + A LI GPPGTGKT+T++ ++ +
Sbjct: 1253 PSPLLTYKDSQIQPLILNYDLTLAQGKAIKSAIDNDGFTLIQGPPGTGKTRTITAIVGAI 1312
Query: 74 LQMKFRT--------------------LVCTPTNVAIKELAARVVKLVKESVERDCRDAL 113
L FR LVC P+N A+ EL R+ +K +++ + R
Sbjct: 1313 LSGSFRNRGTNIAVPGKSQSDPTPKKILVCAPSNAAVDELCMRLRPGIK-TLDGEVRQI- 1370
Query: 114 FFPLGDILLLGNNERLKVDSGVEEIYLDYRV-KRLA 148
+I+ LG ++ V++ ++++ LD V KRL
Sbjct: 1371 -----NIVRLGRSD--AVEANLQDLTLDELVDKRLG 1399
>gi|145342493|ref|XP_001416216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576441|gb|ABO94509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 795
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 154/275 (56%), Gaps = 12/275 (4%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P ++IDEA Q E + IP+ LS H VL GD QLPA V+S + +A F RSLFER
Sbjct: 518 PFKTIIIDEACQANELSTLIPMTLSN-AHCVLVGDPKQLPATVKSLNAKQAKFDRSLFER 576
Query: 424 LSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSF 483
L G +LL++QYRMHP I FP+S FY N + D+ + K P + PY
Sbjct: 577 LMVAGMRCNLLTVQYRMHPQIRMFPSSIFYSNALIDAPGLAKIRDLPSHRCWP-FQPYMV 635
Query: 484 INVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWI---DSKEKLSIGIVSPYSAQVVA 539
+ G+E + S N VE S ++ +L Y+ + DS +K + ++S Y Q
Sbjct: 636 FDAVDGQEIQAASFSRYNQVEASFIIDLLEKYYQLFPLVDDSTQK--VVVLSGYRKQCEL 693
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
IQ L K + G + V +ID FQG E DL+I+S VR+ + IGF+S+ +R+NVALT
Sbjct: 694 IQNMLHQK--PTLGQLISVSTIDAFQGQEGDLVILSCVRT-SANDIGFVSDMRRLNVALT 750
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA+ LWI+ ++ K + W+AL+ +A R C+
Sbjct: 751 RAKSSLWIVCKCEAVS-KFNFWKALLKNAKERGCY 784
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 67/220 (30%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKA---TIQLIWGPPGTGKTKTVSML--LVILL 74
F + +TLN Q A+L+C++++ K+ LI GPPGTGKTK + L +V LL
Sbjct: 240 FVAPMQATLNTPQLDALLACVQRIHNSKKSDQPPFSLIQGPPGTGKTKVILSLANVVHLL 299
Query: 75 Q--------------------------------------MKFRTLVCTPTNVAIKELAAR 96
Q K R L+C P+N A+ + R
Sbjct: 300 QFHDYFEKVMSLVKAGKVAQADSLKRKRQTEQDNANTHNFKPRILICAPSNAAVDNILER 359
Query: 97 VVKLVKESVERDCR--DALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRLADCFAPL 154
+++ ER + ++ + P DIL L + + V + + + ++ RV+ L +
Sbjct: 360 IIR------ERFAQLDNSRYSP--DILRLVSGD-ANVSTTAQSVSVEQRVRNLME--MST 408
Query: 155 TGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDI 194
WS ++ YHT +E +K E + DI
Sbjct: 409 LDWSSWYSRQ----------YHTVTVSE-LKIKEHLRDDI 437
>gi|224140843|ref|XP_002323788.1| predicted protein [Populus trichocarpa]
gi|222866790|gb|EEF03921.1| predicted protein [Populus trichocarpa]
Length = 565
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 165/324 (50%), Gaps = 25/324 (7%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L+ + + ST S S L S + ++IDEAAQ E + +PL ++G K
Sbjct: 176 DSIRAAILEESVIVFSTLSFSGSALFSKLNHGFDVVIIDEAAQAVEPATLVPL-VNGCKQ 234
Query: 393 AVLF-------------------GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL 433
L GD QLPA V S + + +G SLFER GY ++
Sbjct: 235 VFLVSKIHTNIKRLLDNLTVLIVGDPVQLPATVISPTAGKFGYGTSLFERFQRAGYPVNM 294
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L +QYRMHP I FP+S FY ++D+ + +R+ + + +GP+ F +V G+E
Sbjct: 295 LKMQYRMHPEIRSFPSSEFYAEALQDADDLERRT-TRDWHQYHCFGPFCFFDVHEGKESQ 353
Query: 494 IEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
S N+ EV V+ + L + + + I+SPY QV Q++ +
Sbjct: 354 PSGSGSWVNVDEVEFVLLLYHKLVTMYPELRSSSQFAIISPYRHQVKLFQDRFRDAFGQE 413
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
+ V + ++DGFQG E+D+ I S VRSN+ IGF+S+++R+NV +TRA+ + ++G+A
Sbjct: 414 SKKFVDIQTVDGFQGREKDVAIFSCVRSNDDRRIGFVSDARRMNVGITRAKSAVLVVGSA 473
Query: 612 RTLTRKKSVWEALVHDANARQCFF 635
TL R W LV A R F
Sbjct: 474 STL-RNDEHWNNLVESAEKRNVLF 496
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 148/262 (56%), Gaps = 23/262 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E E IP+ L G K VL GD CQL +V SK + A SLF RL L
Sbjct: 795 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 853
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP++S FP+ +FYE ++++ T+ +R+Y F GP G + F
Sbjct: 854 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTY---FHRGP--GEHRFPWPS 908
Query: 488 GGREEFIEHSCR------------NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
R F HS N VE S + KI+ L K + + + IG+++PY
Sbjct: 909 EERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 965
Query: 536 QVVAIQEKLGSK-YVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
Q I + + A FA ++V S+D FQG E+D I++S VRSN+ IGFL++S+R
Sbjct: 966 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1025
Query: 594 VNVALTRARHCLWILGNARTLT 615
+NVA+TRA++ L I GNA L
Sbjct: 1026 LNVAMTRAKYGLIICGNASVLA 1047
>gi|145353141|ref|XP_001420883.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581119|gb|ABO99176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 187/349 (53%), Gaps = 21/349 (6%)
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
EGL+K+ V + L +++++ P A + + E L++ +A
Sbjct: 3 EGLAKAGVNVIRLGRPEAVRPDLARYQIENAIP----PGATKHEAYEAQLRAVRYAQAVC 58
Query: 347 FLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
+ S S L + NF +++DEA+Q+ E + +PL +G + VL GD QLP
Sbjct: 59 ATCSGSGSDFLDRI-----NFSAVMLDEASQVTEPMALVPLA-NGCQQLVLVGDHKQLPP 112
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V S+ + A SLF+RL G +LL Q+RMHP+IS FP+ FY+ ++ +
Sbjct: 113 TVVSREAELAGMTLSLFDRLIRAGVKPYLLDTQFRMHPAISYFPSLSFYKGLVKSGTPAA 172
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKE 523
+R K F P +F E ++ S N VE VMKIL +L +A
Sbjct: 173 ERPAPKGFAWPIPSVPIAFCPSPQDAMETNDNMSYSNKVEAERVMKILTDLLQA--KELR 230
Query: 524 KLSIGIVSPYSAQVVAIQEKLGSKYVNSA-----GFA-VKVMSIDGFQGGEEDLIIISTV 577
+ +IGIV+PY++QV I+ L ++ V + G A V+V S+DG+QG E++L+I+STV
Sbjct: 231 ECNIGIVTPYASQVRLIRSMLRARGVRTGVDRETGEAGVEVSSVDGYQGREKELMIVSTV 290
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
R+NN +IGF+++++R NV LTRAR + ++G+A TL+R + W V
Sbjct: 291 RANNLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSRDRRTWGPWVR 339
>gi|308807350|ref|XP_003080986.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
gi|116059447|emb|CAL55154.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
Length = 958
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 209/429 (48%), Gaps = 35/429 (8%)
Query: 290 SKSIVGIKYLLHKRRSECH---FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
S +IV + +H + H + ++L L+ E + D LK L+ AS+
Sbjct: 476 SPTIVRVGVNVHHSVKQVHMDTLISQRLGELGAHLDSVRRFEAAIERDRLKQAILEEASV 535
Query: 347 FLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAM 405
ST S S + S + + ++IDEAAQ E + IPL SG K L GD QLPA
Sbjct: 536 VCSTLSFSGSGMFSRMSKTFDAVIIDEAAQAVEPSTLIPL-CSGAKQVFLVGDPRQLPAT 594
Query: 406 VESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRK 465
V + ++ + + S+F+R GY H+L QYRMHPSI FP+ FY+N++ D + K
Sbjct: 595 VLNSIAIDHGYDTSMFKRFQSCGYPVHVLKTQYRMHPSIRVFPSMLFYDNELIDGPGLDK 654
Query: 466 RSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
+ + H ++ P+ F +V G HS N E ++ ++ L+ + +
Sbjct: 655 LTTRRWHKHS-VFRPFVFFDVKGKERASAGHSWVNDEESEFIVALVQTLFARFPELIAGE 713
Query: 526 SIGIVSPYSAQVVA----IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
+ ++SPY AQV I+EKLG+K V V +IDGFQG E+D+ I S VR+
Sbjct: 714 HVAVISPYKAQVRNIRRLIKEKLGAK----KALRVDVNTIDGFQGHEKDICIFSVVRAPK 769
Query: 582 ------GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
GG +GF+++ +R+NV LTRAR L+++G A ++ + W +LV A R C
Sbjct: 770 RGAGSSGGGLGFVADERRINVGLTRARSSLFVVGAAESI-KGDDRWGSLVESARRRNC-- 826
Query: 636 NADDDKDLGKAILAVKKELDELDELLNPES--RLFRSQRWKVNFSENFLKSFRKLTSDPT 693
A+ K D L++ S R RS R +V F ++F T+ T
Sbjct: 827 ----------ALTPSKPYRDFLNKHSARASWERQLRSSRKRVRMKICFERTFGMKTTYTT 876
Query: 694 KKSVIHLLL 702
+ + L L
Sbjct: 877 RTGAVRLSL 885
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 14/376 (3%)
Query: 269 EDNLVSEELEELLSHSVDEGLS---KSIVGIKYL-LHKRRSECHFVLRKLQSSFNELNLP 324
E N +++E + L S DE L K V K L ++K+RSE + +KL ++
Sbjct: 1411 ELNKMTQERDRLRSRLNDETLDPKEKDGVQQKLLEINKQRSE---LTKKLDDQRERSSI- 1466
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTI 383
+ K++ +++ L A++ +T S S++ L + + ++IDEA Q ES + I
Sbjct: 1467 AYRNKEIDRRNIQARILSEANILCATLSGSAHDLVANLSVTFDQVIIDEACQCLESAAII 1526
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G K ++ GD QLP V S+ + + +SLF R+ S +LL+ QYRMHP
Sbjct: 1527 PLRY-GCKKCIMVGDPNQLPPTVLSQSAASLNYDQSLFVRMQQNYPDSVYLLNTQYRMHP 1585
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNM 501
IS FP++ FY++K+ D +++++ L P+ PY F ++ E+ + S N
Sbjct: 1586 MISKFPSAEFYQSKLIDGPGMKEKNTRPWHLIDPL-SPYRFFDIVSRHEKNELTRSLFNK 1644
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
E +V ++++ + S IGI+SPY Q+ I+ Y + ++
Sbjct: 1645 EEANVCLQLVQKMMTMVPQSDIAGKIGIISPYKEQIRTIKSVFERAYGRLIFNEIDFNTV 1704
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
DGFQG E+++II+S VR++ G++GFLS+ +R+NVALTRA LWILGN +L R +VW
Sbjct: 1705 DGFQGQEKEIIIMSCVRASANGNVGFLSDVRRMNVALTRACTTLWILGNKTSLER-DAVW 1763
Query: 622 EALVHDANARQCFFNA 637
+ L+ DA R A
Sbjct: 1764 KRLLEDAEKRNTVTKA 1779
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 28/97 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N SQA+A++ + LI GPPGTGKTKT+ L ++ + T
Sbjct: 1272 VNMSQAKAIIGSYQS------EGFSLIQGPPGTGKTKTI--LGIVGYSLSHGTNEKVIEM 1323
Query: 81 -------------LVCTPTNVAIKELAARVVKLVKES 104
L+C P+N A+ EL R+ VK S
Sbjct: 1324 PSKSSSPPSKAKILICAPSNAAVDELVVRLRNGVKNS 1360
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 206/405 (50%), Gaps = 25/405 (6%)
Query: 267 LFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL------LHKRRSECHFVLRKLQSSFNE 320
L+E++ ++ + L +DE +K + + L + K+RS+ + K + +
Sbjct: 1445 LYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDLMKKKRSQLSTSIDKARDQNHT 1504
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKE 378
L A D+ + ++ + + + +T S S + + +E ++IDEAAQ E
Sbjct: 1505 L----ARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMNVE-FETVIIDEAAQCIE 1559
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQ 437
+ IPL+ G VL GD QLP V SK++++ + +SLF R+ HLL IQ
Sbjct: 1560 LSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDVHLLDIQ 1618
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP+IS FP+ FY+ K++D + +R+R + + L PY F +V G
Sbjct: 1619 YRMHPAISHFPSVTFYDGKLQDGPDMAKLRQRPWHQSEL----LSPYRFFDVQGMHSSAA 1674
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
HS N E+ V M++ L + IGI++PY Q+ ++ + +Y
Sbjct: 1675 RGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDIL 1734
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1735 RKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1793
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
L + + W L+ +A R + D K L K KE++ +D
Sbjct: 1794 LEQGQ-FWNGLIKNARERNVYTEGDIVKILQKPQFTGYKEIEMVD 1837
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 25/100 (25%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
++N +QA+A+ S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1305 SINRAQARAIKSAV-----DNDA-FTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVN 1358
Query: 76 --------MKFRTLVCTPTNVAIKELAARVVKLVKESVER 107
+ + L+C P+N A+ EL R+ V+ + R
Sbjct: 1359 GAPVARNALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGR 1398
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 206/405 (50%), Gaps = 25/405 (6%)
Query: 267 LFEDNLVSEELEELLSHSVDEGLSKSIVGIKYL------LHKRRSECHFVLRKLQSSFNE 320
L+E++ ++ + L +DE +K + + L + K+RS+ + K + +
Sbjct: 1445 LYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDLMKKKRSQLSTSIDKARDQNHT 1504
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKE 378
L A D+ + ++ + + + +T S S + + +E ++IDEAAQ E
Sbjct: 1505 L----ARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMNVE-FETVIIDEAAQCIE 1559
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQ 437
+ IPL+ G VL GD QLP V SK++++ + +SLF R+ HLL IQ
Sbjct: 1560 LSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDVHLLDIQ 1618
Query: 438 YRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
YRMHP+IS FP+ FY+ K++D + +R+R + + L PY F +V G
Sbjct: 1619 YRMHPAISHFPSVTFYDGKLQDGPDMAKLRQRPWHQSEL----LSPYRFFDVQGMHSSAA 1674
Query: 495 E-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
HS N E+ V M++ L + IGI++PY Q+ ++ + +Y
Sbjct: 1675 RGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDIL 1734
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
V + D FQG E ++II S VR++N G IGFL++ +R+NV LTRA+ LW+LGN+++
Sbjct: 1735 RKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSSLWVLGNSQS 1793
Query: 614 LTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
L + + W L+ +A R + D K L K KE++ +D
Sbjct: 1794 LEQGQ-FWNGLIKNARERNVYTEGDIVKILQKPQFTGYKEIEMVD 1837
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 25/100 (25%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
++N +QA+A+ S + D+ A LI GPPG+GKTKT+ L+ LL
Sbjct: 1305 SINRAQARAIKSAV-----DNDA-FTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVN 1358
Query: 76 --------MKFRTLVCTPTNVAIKELAARVVKLVKESVER 107
+ + L+C P+N A+ EL R+ V+ + R
Sbjct: 1359 GAPVARNALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGR 1398
>gi|302766231|ref|XP_002966536.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
gi|300165956|gb|EFJ32563.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
Length = 1019
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 149/270 (55%), Gaps = 19/270 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
++IDEAAQ E + IPLQL +L GD QLPA V S ++ F S+FER
Sbjct: 742 VIIDEAAQAVEPSTLIPLQLLKATRGKCILIGDPKQLPATVLSVPASRLLFDCSMFERFQ 801
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
GY YRMHP I FP++++Y +++D STV + F + PY F +
Sbjct: 802 KNGYP-------YRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSAPFHRERRFEPYRFFD 854
Query: 486 VFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+ G+E S N E + ++L L + + + IG+++PY Q +QE +
Sbjct: 855 IRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQENM 914
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS---IGFLSNSKRVNVALTRA 601
S + + V ++D FQG E D+I++STVR++ G S +GFL++ +R+NVALTRA
Sbjct: 915 RSLHS-----GIDVNTVDSFQGREADIIVLSTVRASFGESQAGVGFLADVRRMNVALTRA 969
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANAR 631
+ LW++GNARTL R S W+AL+ D R
Sbjct: 970 KFSLWVVGNARTLER-NSDWKALLQDCRRR 998
>gi|308810817|ref|XP_003082717.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061186|emb|CAL56574.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 878
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 170/318 (53%), Gaps = 26/318 (8%)
Query: 330 DLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
D +ED ++ L RA L T +SS +MEP + L++DEAAQ E E IP L
Sbjct: 571 DRVEDFVRE-ALHRARLVFCTLASSGQSLCQSMEPPDVLLVDEAAQALEPEIAIPF-LRL 628
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFP 448
+ +L GD QLPA + S+++ RSL ERL L S +LL QYRMHP IS +P
Sbjct: 629 PRKVLLVGDPAQLPATMCSELARRLGHARSLMERLMSLDDSAANLLDTQYRMHPRISSWP 688
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV-----FGGREEFIEHSCRNMV 502
++ +Y ++ D+ V +R F P + PY F++V +GGR S RN
Sbjct: 689 SARYYSGRVMDAEHVIEREQPLDF---PRWLPPYVFVDVKRGVEYGGRG----MSKRNDA 741
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E V + + + SI +++ YSAQV I+ L ++ + GF V S+D
Sbjct: 742 EAEAVCDAIQAIRRG-----STFSIVVITFYSAQVRKIRAALAARGLR--GF--DVHSVD 792
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR-KKSVW 621
FQG E D+++ S VRSN +GFLS+S+R+NVALTRA+H L L ++ TL+R
Sbjct: 793 SFQGSEADVVVCSAVRSNTKARVGFLSDSRRLNVALTRAKHSLVFLASSDTLSRCDVDDL 852
Query: 622 EALVHDANARQCFFNADD 639
+LV DA + + +D
Sbjct: 853 RSLVEDAREKDSWVTEED 870
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ +A+ R + H +Q++ GPPG GKT+ V LL L++ R LVC P+N
Sbjct: 377 LNASQRRAMQ---RFLNASHSNALQMVQGPPGCGKTRFVVALLRRLMRDDQRVLVCAPSN 433
Query: 88 VAI 90
A+
Sbjct: 434 KAV 436
>gi|452846946|gb|EME48878.1| hypothetical protein DOTSEDRAFT_117955, partial [Dothistroma
septosporum NZE10]
Length = 1788
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 174/310 (56%), Gaps = 14/310 (4%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
E++L + ++ L+ A + +T S S + ++++E ++IDEAAQ E ES IPL
Sbjct: 1487 EEELNKRRVQQTVLEEAHVVCATLSGSGHDIFQTLSVE-FESVIIDEAAQCVEMESLIPL 1545
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSI 444
+ +K ++ GD QLP V SK + + + +SLF R+ + HLL QYRMHP I
Sbjct: 1546 KYGCVK-CIMVGDPNQLPPTVFSKEAQKFQYEQSLFVRMQNNFPNHVHLLDTQYRMHPDI 1604
Query: 445 SCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNM 501
S FP+ FY+ K+ D + +RK+ + L PY F +V G+++ S N+
Sbjct: 1605 SFFPSETFYDRKLMDGPNMAELRKQPWHASAL----LAPYRFFDV-AGQQQTSAKSFINL 1659
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSI 561
E+ + M + + + + IGI++PY +Q+ ++ + +KY ++ +
Sbjct: 1660 AEIDIAMLLYDRVRADFSELDWNNKIGIITPYKSQLRELKRRFANKYGEGIQDFIEFNTT 1719
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D FQG E ++II S VR++ G IGFL + +R+NV LTRA+ LW+LGN+ +L+R + W
Sbjct: 1720 DAFQGRECEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLSRGR-YW 1778
Query: 622 EALVHDANAR 631
+ LV +A AR
Sbjct: 1779 KLLVDNAKAR 1788
>gi|366997484|ref|XP_003678504.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
gi|342304376|emb|CCC72166.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
Length = 2314
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 161/276 (58%), Gaps = 12/276 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1556 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1613
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
+ +LL +QYRMHP IS FP++ FY +++D + + + P + PY F ++
Sbjct: 1614 NTTPYLLDVQYRMHPEISKFPSAEFYNGRLKDGPNMEEVNMRPWHSTSP-FSPYKFFDIV 1672
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAW---IDSKEKLSIGIVSPYSAQVVAIQE 542
G+++ + + NM E+ V ++++ +L++ + ID K IG++SPY Q+ +++
Sbjct: 1673 SGKQQQNKKTMSYINMEEIQVALELVDSLFQQFENRIDFTGK--IGVISPYREQMQRMRK 1730
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRA 601
+ + + V +IDGFQG E+++IIIS VR+++ S+GFL + +R+NVA TRA
Sbjct: 1731 EFLRYFGGTIMQYVDFNTIDGFQGQEKEIIIISCVRADDTQSSVGFLKDFRRMNVAFTRA 1790
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+ LWILG+ ++L + K +W L+ DA R C A
Sbjct: 1791 KASLWILGHQQSLIKNK-LWRDLIIDAKNRNCLTTA 1825
Score = 42.4 bits (98), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 33/97 (34%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV--------------------- 66
LN SQA A+++ + K LI GPPGTGKTKT+
Sbjct: 1302 LNTSQADAIVNTV------AKDGFSLIQGPPGTGKTKTILGIIGYFLSTRKMLPSNAIKT 1355
Query: 67 ------SMLLVILLQMKFRTLVCTPTNVAIKELAARV 97
S + + + K + L+C P+N A+ E+ R+
Sbjct: 1356 PTNSSTSSMTIDQMLKKQKILICAPSNAAVDEICIRL 1392
>gi|340519570|gb|EGR49808.1| hypothetical protein TRIREDRAFT_59544 [Trichoderma reesei QM6a]
Length = 2034
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 173/320 (54%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E +L ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1544 AREMELRRRQIQQEILNSAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1602
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1603 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHP 1661
Query: 443 SISCFPNSYFYENKIRDSSTV---RKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE++++D + R+ + K L + PY F +V G +E + S
Sbjct: 1662 EISSFPSREFYESQLKDGQDMLRLRQAPWHKDAL----FAPYRFFDVEGVQERGRKGQSL 1717
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V +++ + + D IGI++PY AQ+ ++ + ++Y + ++
Sbjct: 1718 VNTKELDVALQMYERFSRDYRDCDLTRKIGIITPYKAQLHELRSRFQARYGENITNIIEF 1777
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1778 NTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1837
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ DA R + D
Sbjct: 1838 -FWRKLIEDAQGRDRYTKGD 1856
>gi|440634637|gb|ELR04556.1| hypothetical protein GMDG_06846 [Geomyces destructans 20631-21]
Length = 1897
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 7/290 (2%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S M +++E ++IDEAAQ E + IPL+ + K +L GD QLP V S
Sbjct: 1559 SGSGHEMFKKLSVE-FETVIIDEAAQSIEMSALIPLKYNCTK-CILVGDPKQLPPTVLST 1616
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
V+ E + +SLFER+ + HLL QYRMHP IS FP FY+ ++ D + + K
Sbjct: 1617 VAAEFGYDQSLFERMQKNHPDRIHLLDTQYRMHPEISSFPRGEFYDGELVDGAGLEKLR- 1675
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIG 528
+K + + GPY F ++ G HS N E+ V +++ L + K +G
Sbjct: 1676 QKPWHASALLGPYRFFDLKGTSSRSGGHSMVNYDEIKVALQLYKRLKTDYPFFDIKGKVG 1735
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
I++PY Q+ I+ L +Y + + + D FQG E ++II S VR+ G +GFL
Sbjct: 1736 IITPYKGQLREIRFALQREYGDDILDDIDTNTTDAFQGREAEVIIFSCVRTMGG--VGFL 1793
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
+ +R+NV LTRA+ LW++G++ TL R + VW ++ DA R F + D
Sbjct: 1794 KDVRRMNVGLTRAKSSLWVIGDSSTLQRDR-VWSNMIQDAKRRDRFTSGD 1842
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 148/262 (56%), Gaps = 23/262 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E E IP+ L G K VL GD CQL +V SK + A SLF RL L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP++S FP+ +FYE ++++ T+ +R+Y F GP G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTY---FHQGP--GDHRFPWPN 901
Query: 488 GGREEFIEHSCR------------NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
R F HS N VE S + KI+ L K + + + IG+++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 536 QVVAIQEKLGSK-YVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
Q I + + A FA ++V S+D FQG E+D I++S VRSN+ IGFL++S+R
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 594 VNVALTRARHCLWILGNARTLT 615
+NVA+TRA++ L I GNA L
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLA 1040
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 9/289 (3%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
+K AS+ ST + S + ++IDE+ Q E S IPL L +K +L GD
Sbjct: 1304 IKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPV 1363
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QLP + SK + SLFERL+ L+ QYRMHP S F + FY ++D
Sbjct: 1364 QLPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVTSKFISEEFYNGTLKDG 1422
Query: 461 STVRKRSYEK-RFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
V SY +F P +GP F ++ ++ I+ S N E+ V ++ L + +
Sbjct: 1423 ENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEKYP 1482
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLG-SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ K KLS GI++PY Q+ I+E+L S++ N + V +IDG QG E+D+II+S VR
Sbjct: 1483 ECK-KLSFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIMSCVR 1538
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA-LVH 626
S IGFLS+ +R+NVALTRA+ L+++G + L K + WE L+H
Sbjct: 1539 SIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVLA-KDNTWEKFLIH 1586
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 12/86 (13%)
Query: 20 FGPSLSST----LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
F P+L + LN+SQ A+ S L + + I LI GPPGTGKT T++ LL +LL
Sbjct: 1181 FPPTLETICKEKLNESQLNAIKSSLVE------SGITLIQGPPGTGKTTTINYLLSVLLA 1234
Query: 76 M--KFRTLVCTPTNVAIKELAARVVK 99
+ KF+ LVC P++ ++ E+A R +K
Sbjct: 1235 IDKKFKILVCGPSHASVDEVAKRCLK 1260
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 167/303 (55%), Gaps = 10/303 (3%)
Query: 341 LKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L +A + +T S S M ++ +E ++IDEAAQ E + IPL+ G +L GD
Sbjct: 1540 LDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALIPLKY-GCSKCILVGD 1597
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENK 456
QLP V S+ + + +SLF R+ ++K HLL +QYRMHP IS FP+ FYE
Sbjct: 1598 PKQLPPTVLSQSAARYGYDQSLFVRMQK-NHAKDVHLLDMQYRMHPEISKFPSKEFYEGL 1656
Query: 457 IRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLY 515
++D + + + + + + GPY F +V G + S N E+ V M++
Sbjct: 1657 LQDGADMGQLRMQP-WHQSELLGPYRFFDVKGSQSRGPRNQSLVNDEELKVAMQLYHRFR 1715
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ + + K IGI++PY AQ+ ++++ KY + ++ + D FQG E ++II S
Sbjct: 1716 TDYGNVELKGKIGIITPYKAQLFRLRQRFAEKYGDGIAEEIEFNTTDAFQGRECEIIIFS 1775
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
VR++ G IGF+++ +R+NV LTRAR LWILG++R L + + W L+ DA R +
Sbjct: 1776 CVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALVQGE-FWGKLIEDAKERDRYT 1834
Query: 636 NAD 638
+ +
Sbjct: 1835 SGN 1837
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 29/98 (29%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ L+ GPPGTGKTKT+ ++ LL ++
Sbjct: 1320 LNPGQARAILNA------KENDGFTLVQGPPGTGKTKTIVAMVGCLLTGVLKSSSGAVPV 1373
Query: 81 ----------------LVCTPTNVAIKELAARVVKLVK 102
LVC P+N A+ EL R+ VK
Sbjct: 1374 VRPGAASINQAPSKKLLVCAPSNAAVDELVLRLKAGVK 1411
>gi|392575976|gb|EIW69108.1| hypothetical protein TREMEDRAFT_31469 [Tremella mesenterica DSM 1558]
Length = 1969
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 150/284 (52%), Gaps = 6/284 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEAAQ E IPL+ G ++ GD QLP + + + SLF RL+
Sbjct: 1665 VIIDEAAQAIELSCLIPLKY-GCTRCIMVGDPQQLPPTTLNPDGEKYAYNESLFVRLARE 1723
Query: 428 GYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
S HLLSIQYRMHP IS P+ FY ++D + +R+ + + YGPY F N+
Sbjct: 1724 NRSNVHLLSIQYRMHPDISRLPSKVFYHGALKDGPNM-ERNTKAVWHENKNYGPYRFFNI 1782
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKE-KLSIGIVSPYSAQVVAIQEKLG 545
G E S +N E + I +L + + D L +GI++ Y Q+ I+ +
Sbjct: 1783 EGS-EIKAGTSTKNPEEAIAAVNIYKHLEEDFGDRTNLALRVGIITMYREQMYEIKRQFL 1841
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHC 604
+ S ++ ++DGFQG E+D+II+S VRS N +IGFL + +R+NVALTRA+
Sbjct: 1842 QAFGGSIMEMIEFNTVDGFQGQEKDIIILSCVRSGPNLRTIGFLRDERRMNVALTRAKSS 1901
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAIL 648
LWI+GN TL R W+ +V DA R F D ++L
Sbjct: 1902 LWIVGNGSTLERSDERWKVIVGDARERGFFLEVSSDLTFTPSLL 1945
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 20/91 (21%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
+N+ QA+A+L M+ + A IQ GPPGTGKTKT+S L+ +
Sbjct: 1429 VNEPQAKAILGA---MQVNGFALIQ---GPPGTGKTKTISGLVGKFMSERSIPIAMGHGE 1482
Query: 76 --MKFRTLVCTPTNVAIKELAARVVKLVKES 104
+K + LVC P+N AI E+ R++ V S
Sbjct: 1483 KPVKPKLLVCAPSNAAIDEVCKRLMNGVPSS 1513
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 167/317 (52%), Gaps = 17/317 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ ++G + +L GD CQL +V K + A +SLFERL L
Sbjct: 584 VLIDESTQATEPECLIPI-MTGARQVILVGDHCQLGPVVMCKKAARAGLNQSLFERLVIL 642
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S P++ FYE +++ T ++R E P F
Sbjct: 643 GNRPIRLQVQYRMHPLLSSLPSNLFYEGTLQNGVTEQERILEGVDFRWPNPTVPMFFWCT 702
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-VVAIQEKL 544
+EE S N E + + KI ++ I + + IGI++PY Q +Q L
Sbjct: 703 ASQEEISSSGTSFLNRAEAAHIEKIATKFLRSGIRADQ---IGIITPYEGQRAYIVQHML 759
Query: 545 GSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S +N+ + ++V S+D FQG E+D+I++S VRSN IGFL++ +R+NVALTRAR+
Sbjct: 760 LSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDPRRLNVALTRARY 819
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNA--------DDDKDLGKAILAVKKELD 655
L I+GN + L+R + +W +L+ C + D + GK+ L V K +
Sbjct: 820 GLIIVGNPKVLSR-QPMWHSLLRFCRENHCLLDGPLNALKEYKVDFNKGKSNLPVMKTIT 878
Query: 656 ELDELLNPESRLFRSQR 672
D LLN ++ S R
Sbjct: 879 VKDMLLNSRPKVSSSYR 895
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L + +I LI GPPGTGKT T + ++ L + LVC P+
Sbjct: 436 LNHSQVMAVREVLTR-------SISLIQGPPGTGKTVTSASIVYHLAKAGGTPILVCAPS 488
Query: 87 NVAIKELAARVVKLVKESV 105
NVA+ + A+ + + V
Sbjct: 489 NVAVIRMCAKSREAIDSPV 507
>gi|156842218|ref|XP_001644478.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115121|gb|EDO16620.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 2267
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 192/346 (55%), Gaps = 27/346 (7%)
Query: 305 SECHFVLRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
S+ +R+L NEL N + +DL ++ L +S+ ST S S
Sbjct: 1505 SKLQLEIRELSKEINELGKERDEIREQNSITYRNRDLDRRNAQARILASSSIICSTLSGS 1564
Query: 355 Y--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+L S+ ++ + ++IDEA Q E + IPL+ G K ++ GD QLP V S ++
Sbjct: 1565 AHDVLASLGVK-FDTVIIDEACQCTELSAIIPLRYGG-KRCIMVGDPNQLPPTVLSGAAS 1622
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ + +SLF R+ + +LL +QYRM+P+IS FP+ FY +++D + + KR
Sbjct: 1623 KLNYNQSLFVRIEK-NSTPYLLDVQYRMNPAISVFPSLEFYCGRLKDGPNME--AITKRP 1679
Query: 473 LH--GPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS-- 526
H P+ Y F ++ GR+E S NM E+ V ++++ L K + ++K S
Sbjct: 1680 WHDVAPL-STYRFFDIVSGRQEQNIKTMSYVNMEEIRVAIELIDYLLKKF-ENKYDFSGK 1737
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR-SNNGGSI 585
IGI+SPY QV+ ++ + + + + V +IDGFQG E+++IIIS VR S++G S+
Sbjct: 1738 IGIISPYKEQVIKMRREFRNFFGSPISKYVDFNTIDGFQGQEKEIIIISCVRASDSGTSV 1797
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL + +R+NVALTRA+ +WILG+ ++L K +W L+ DA R
Sbjct: 1798 GFLKDFRRMNVALTRAKSSMWILGHHKSLQNNK-LWNHLISDAKER 1842
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 148/262 (56%), Gaps = 23/262 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E E IP+ L G K VL GD CQL +V SK + A SLF RL L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP++S FP+ +FYE ++++ T+ +R+Y F GP G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTY---FHQGP--GDHRFPWPN 901
Query: 488 GGREEFIEHSCR------------NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
R F HS N +E S + KI+ L K + + + IG+++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 536 QVVAIQEKLGSK-YVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
Q I + + A FA ++V S+D FQG E+D I++S VRSN+ IGFL++S+R
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 594 VNVALTRARHCLWILGNARTLT 615
+NVA+TRA++ L I GNA L
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLA 1040
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 148/262 (56%), Gaps = 23/262 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E E IP+ L G K VL GD CQL +V SK + A SLF RL L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP++S FP+ +FYE ++++ T+ +R+Y F GP G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTY---FHQGP--GDHRFPWPN 901
Query: 488 GGREEFIEHSCR------------NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
R F HS N +E S + KI+ L K + + + IG+++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 536 QVVAIQEKLGSK-YVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
Q I + + A FA ++V S+D FQG E+D I++S VRSN+ IGFL++S+R
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 594 VNVALTRARHCLWILGNARTLT 615
+NVA+TRA++ L I GNA L
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLA 1040
>gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gibberella zeae PH-1]
Length = 2078
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 164/302 (54%), Gaps = 8/302 (2%)
Query: 341 LKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L A + +T S S M ++ +E ++IDEAAQ E + IPL+ G VL GD
Sbjct: 1563 LNNAQVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALIPLKY-GCYRCVLVGD 1620
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S+ + + + +SLF R+ HLL +QYRMHP IS FP+ FYE ++
Sbjct: 1621 PKQLPPTVLSQSAAKFGYDQSLFVRMQQNHPDWVHLLDMQYRMHPEISMFPSREFYEGQL 1680
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYK 516
D + + ++ + + GPY F +V G + + S N E+ V M++
Sbjct: 1681 ADGQNMHELR-QQPWHQSALLGPYRFFDVQGVQARGHKGQSLVNTRELDVAMQMYDRFSN 1739
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ D IGI++PY AQ+ ++ + S+Y ++ + D FQG E ++II S
Sbjct: 1740 EYGDCDLTGKIGIITPYKAQLFELRNRFRSRYGEGITDIIEFNTTDAFQGRECEIIIFSC 1799
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + + W+ L+ DA +R +
Sbjct: 1800 VRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE-FWKKLIEDAQSRDRYTK 1858
Query: 637 AD 638
D
Sbjct: 1859 GD 1860
>gi|412990245|emb|CCO19563.1| predicted protein [Bathycoccus prasinos]
Length = 688
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 150/267 (56%), Gaps = 8/267 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ L+IDEAAQ E + IPL L G+KH +L GD QLP+ + S+ + A FGRSLF+RL
Sbjct: 407 FDVLLIDEAAQANELATLIPLTL-GVKHCILIGDNFQLPSTIISERAKTAKFGRSLFQRL 465
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+ LSIQYRM P I FP+ +FY+ + D ++ + + Y +
Sbjct: 466 LENDFDFISLSIQYRMLPEIRHFPSRFFYDGILTDDPSMSNKGVMNKMWPSEPYLLFDTG 525
Query: 485 NVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+ F R S N+ EVS++ LL + + + SI +++PY Q I++ L
Sbjct: 526 DTFETRSN--RGSVVNLFEVSLIFS-LLKCFTSMNPGRTLQSIAVITPYKEQKDLIEQTL 582
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
+ S V +IDGFQG E + +IIS VR+ N +IGFLS+++R+NVA+TRA+
Sbjct: 583 RKTFGRSTSVPC-VSTIDGFQGKECEFVIISCVRATN--NIGFLSDAQRLNVAITRAKKR 639
Query: 605 LWILGNARTLTRKKSVWEALVHDANAR 631
WILGN +L R K +W +V DA +R
Sbjct: 640 CWILGNLNSLCRDK-IWRHVVEDAVSR 665
>gi|336463474|gb|EGO51714.1| hypothetical protein NEUTE1DRAFT_70677 [Neurospora tetrasperma FGSC
2508]
Length = 2064
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 171/318 (53%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1521 ARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 1579
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + +SLF R+ + K HLL QYRMH
Sbjct: 1580 PLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK-NHEKDVHLLDTQYRMH 1637
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
P IS FP + FYE ++D + K S + + + GPY F +V G +E + S N
Sbjct: 1638 PEISSFPRAAFYEGLLQDGDDMAK-SRLQPWHRSTLLGPYRFFDVRGSQERGPKNQSLVN 1696
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V M++ + + K IGI++PY AQ+ ++ + ++ ++ ++ +
Sbjct: 1697 EEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQFAQRFGDTITDEIEFNT 1756
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 1757 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGE-F 1815
Query: 621 WEALVHDANARQCFFNAD 638
W L+ D+ R + +
Sbjct: 1816 WAKLIEDSKRRDRYTTGN 1833
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 39/142 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL +
Sbjct: 1314 LNPGQAKAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPSAGVAI 1367
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLL 123
LVC P+N A+ EL R+ VK ++ + +++ L
Sbjct: 1368 GRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVK------TQNGTTHQI-EVVRL 1420
Query: 124 GNNERLKVDSGVEEIYLDYRVK 145
G ++ ++S V+++ LD VK
Sbjct: 1421 GRSD--AINSAVKDVTLDELVK 1440
>gi|350297309|gb|EGZ78286.1| hypothetical protein NEUTE2DRAFT_102083 [Neurospora tetrasperma FGSC
2509]
Length = 2078
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 172/318 (54%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1521 ARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 1579
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + +SLF R+ + K HLL QYRMH
Sbjct: 1580 PLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK-NHEKDVHLLDTQYRMH 1637
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRN 500
P IS FP + FYE ++D + K S + + + GPY F +V G +E ++ S N
Sbjct: 1638 PEISSFPRAAFYEGLLQDGDDMAK-SRLQPWHRSTLLGPYRFFDVRGSQERGPKNQSLVN 1696
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V M++ + + K IGI++PY AQ+ ++ + ++ ++ ++ +
Sbjct: 1697 EEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQFAQRFGDTITDEIEFNT 1756
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 1757 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGE-F 1815
Query: 621 WEALVHDANARQCFFNAD 638
W L+ D+ R + +
Sbjct: 1816 WAKLIEDSKRRDRYTTGN 1833
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 39/142 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL +
Sbjct: 1314 LNPGQAKAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPSAGVAI 1367
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLL 123
LVC P+N A+ EL R+ VK ++ + +++ L
Sbjct: 1368 GRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVK------TQNGTTHQI-EVVRL 1420
Query: 124 GNNERLKVDSGVEEIYLDYRVK 145
G ++ ++S V+++ LD VK
Sbjct: 1421 GRSD--AINSAVKDVTLDELVK 1440
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 180/358 (50%), Gaps = 39/358 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E +PL L G KHA+L GD QL +V + + A +SLFERL +
Sbjct: 489 VLIDEATQAIEPECLLPL-LKGAKHAILVGDHRQLGPVVTCRDTANAGLNKSLFERLVSM 547
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE + + T R + F P F+N
Sbjct: 548 GVRPTRLQVQYRMHPDLSIFPSNTFYEGTLLNGVTFNDRQFHGDFPWPNKNKPLMFLNSC 607
Query: 488 GGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL-- 544
G E S N E ++ +I+ L K + + IGI++PY Q I + L
Sbjct: 608 GVEEISSSGTSYLNRQETMLIEEIVYKLIKGKVRPDQ---IGIITPYKGQRFYIGDYLQK 664
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
K + ++ S+DGFQG E+D IIIS VRSN IGFL++++R+NVA+TRAR+
Sbjct: 665 NGKLNPTLYQEIECCSVDGFQGREKDYIIISCVRSNESQGIGFLTDARRLNVAITRARYG 724
Query: 605 LWILGNARTLTRKKSVWEALVH---------DAN---ARQC----------------FFN 636
L I+GNA+ L R ++W L++ D N RQC F
Sbjct: 725 LIIVGNAKVLAR-DNLWNNLLNFMKESKVLVDGNLNDLRQCNLKFRPSQKYVPERSDFQK 783
Query: 637 ADDDKDLGKAILAVKKE-LDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPT 693
+D+ D ++ ++ + + ++ D L P + FR+ + N N + F+K+ D T
Sbjct: 784 NNDENDDARSTISYRNDNINNFDNEL-PIGQGFRNSEFGFNKIPN-MAQFKKIQKDIT 839
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 13/76 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------L 81
LN Q +AV L+Q C LI GPPGTGKT T + ++ L+Q RT L
Sbjct: 320 LNYYQVEAVKKALQQPLC-------LIQGPPGTGKTFTSTAIIYHLVQNIKRTGQRGQIL 372
Query: 82 VCTPTNVAIKELAARV 97
VC P+N+ + +LA R+
Sbjct: 373 VCAPSNIVVDQLAERM 388
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 182/342 (53%), Gaps = 21/342 (6%)
Query: 311 LRKLQSSFN---ELNLPSAVEKDLLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPL 365
L+KLQ N EL+ AVE L + ++ + ST + + L S+ +
Sbjct: 505 LQKLQDKKNAEGELSAKEAVEFHKLTRKAEKSVMEDCEVICSTCVGAGDHRLDSMVFRAV 564
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL
Sbjct: 565 ---LIDESTQASEPEIMIPI-VKGAKQVILVGDHQQLGPVILHKKAGDAGLKQSLFERLV 620
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFI 484
LG+ L +QYRMHP +S FP++ FYE +++ + R+++ P+ P F
Sbjct: 621 VLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFW 680
Query: 485 NVFGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
+G REE +S N VE V KI+ L+K + +++ IG+V+PY Q I +
Sbjct: 681 ANYG-REEISASGYSYLNRVEAMNVEKIITRLFKQGVKAEQ---IGVVTPYEGQRAYILQ 736
Query: 543 KL---GSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
+ GS ++ V+V S+D FQG E+D II+S VR+N IGFLS+S+R+NVAL
Sbjct: 737 HMSLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVAL 796
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
TRA++ L I+GN R L++ K +W L+ + C D
Sbjct: 797 TRAKYGLVIVGNPRCLSKNK-LWNHLLIHFREKGCLVEGPLD 837
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 26/97 (26%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-------- 73
P+L++ LN+SQ AV + L++ + LI GPPGTGKT T + ++ L
Sbjct: 382 PNLTA-LNESQENAVRTVLQR-------PLSLIQGPPGTGKTFTSATIIYHLRNMINKKP 433
Query: 74 ----------LQMKFRTLVCTPTNVAIKELAARVVKL 100
Q + LVC P+NVA+ LA ++ L
Sbjct: 434 SGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANL 470
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 155/281 (55%), Gaps = 21/281 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL +L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP +S FP++ FYE +++ T R E+ P+
Sbjct: 661 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 720
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
GREE +S N VE V KI+ L+K I ++ IG+++PY Q + + +
Sbjct: 721 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 777
Query: 546 ---------SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+Y+N V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NV
Sbjct: 778 VNSTLLDKRDQYLN-----VEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNV 832
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
ALTRA++ L ILGN R+L R + +W L+ + C +
Sbjct: 833 ALTRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 872
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 436 PKLTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLNKQKI 487
Query: 81 LVCTPTNVAIKELAAR-------VVKLVKESVE 106
LVC P+NVA+ LAA+ VV+L +S E
Sbjct: 488 LVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSRE 520
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 144/264 (54%), Gaps = 9/264 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IP+ + G K L GD QL +V + EA G S+ +RL L
Sbjct: 554 VIIDEATQAVEPEILIPI-MHGSKQVCLVGDHMQLGPVVTNPKCVEAGLGNSIVQRLVQL 612
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L QYRMHP +S FP++ FY+ ++ + KR+ ++ + P P F N
Sbjct: 613 GLRPQRLLTQYRMHPVLSEFPSNTFYDGELMNGIPAEKRTPQQPVFNWPKPSFPLMFYNN 672
Query: 487 FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
EE N E ++V +I+ L KA +D ++ IGI+SPYS Q +Q L
Sbjct: 673 VNNEEEISNSGTSYINAFEATIVSQIVTQLCKAGVDPQQ---IGIISPYSGQKFYLQNFL 729
Query: 545 GSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
S + F + + S+D FQGGE+D II+S VR N GSIGFL + +R+NVALTRA+
Sbjct: 730 ASMATLPSSFYQRLAIASVDSFQGGEKDYIIMSCVRCNPHGSIGFLKDYRRLNVALTRAK 789
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ L I+G AR L++ + L H
Sbjct: 790 YGLIIVGCARVLSKSILWYNLLRH 813
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTP 85
TLN SQ AV L+ C +I GPPGTGKT T++ L+ LQ K LVC P
Sbjct: 390 TLNLSQVNAVSYALKSPFC-------MIQGPPGTGKTTTIAALVTRFLQAKAGPVLVCAP 442
Query: 86 TNVAIKELAARVVKLVKESVERDCR 110
+N A++ RV + + + CR
Sbjct: 443 SNAAVE----RVTEAIASTHASVCR 463
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 155/281 (55%), Gaps = 21/281 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL +L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP +S FP++ FYE +++ T R E+ P+
Sbjct: 661 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 720
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
GREE +S N VE V KI+ L+K I ++ IG+++PY Q + + +
Sbjct: 721 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 777
Query: 546 ---------SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+Y+N V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NV
Sbjct: 778 VNSTLLDKRDQYLN-----VEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNV 832
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
ALTRA++ L ILGN R+L R + +W L+ + C +
Sbjct: 833 ALTRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 872
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 436 PKLTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLNKQKI 487
Query: 81 LVCTPTNVAIKELAAR-------VVKLVKESVE 106
LVC P+NVA+ LAA+ VV+L +S E
Sbjct: 488 LVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSRE 520
>gi|413933077|gb|AFW67628.1| hypothetical protein ZEAMMB73_310303 [Zea mays]
Length = 824
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 151/280 (53%), Gaps = 15/280 (5%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ ++IDEAAQ E + IPL + G + L GD QLPA V S+ + + +G SLF+R
Sbjct: 477 FDVVIIDEAAQAVEPATLIPL-IHGCRQIFLVGDPVQLPATVISQTAQKLGYGTSLFKRF 535
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV-RKRSYEKRFLHGPMYGPYSF 483
G+ +L IQYRMHP IS FP+ FYE ++D + RKR + +GP+ F
Sbjct: 536 QAAGFPVQMLKIQYRMHPEISTFPSKEFYEGVLQDGEGLSRKRPWHSY----SCFGPFCF 591
Query: 484 INVFG-GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
+V G + S N EV + + L + + K +G++SPY QV +++
Sbjct: 592 FDVDGIESQPSGSGSWVNQDEVEFITLLYHQLALRYPELKSSPEVGVISPYRHQVKLLKD 651
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA- 601
S + + + + V ++DGFQG E++++I S VR N IGF+S+ +R+NVA+TRA
Sbjct: 652 SFRSTFGDQSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNVAITRAK 711
Query: 602 ------RHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
R + ++G+A TL + K W LV A R C F
Sbjct: 712 SAVLKGRPGVVVVGSASTLKQDKH-WNNLVESAKERNCLF 750
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 189/348 (54%), Gaps = 25/348 (7%)
Query: 305 SECHFVLRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
S+ LR+L + NEL N ++L + ++ L + + ST S S
Sbjct: 1488 SKIQLKLRELSKTINELGKQRDELRERNSVIYRNRELNKRKAQARILAESDIICSTLSGS 1547
Query: 355 Y--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+L S+ ++ + ++IDEA Q E S IPL+ G K ++ GD QLP V S ++
Sbjct: 1548 AHDVLASLGVK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAAS 1605
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +SLF R+ HLL +QYRMH IS FP+ FY+ K++D + + ++++
Sbjct: 1606 TYKYNQSLFVRMEN-NCKPHLLDVQYRMHSMISSFPSLEFYDGKLKDGPDMDNIN-QRQW 1663
Query: 473 LHGPMYGPYSFINVFGGREE----FIEHSCRNMVEVSVVM-KILLNLYKAWIDSKEKLSI 527
+ PY F ++ G+++ + + + +VS+ M LL LY+ +D K I
Sbjct: 1664 HETQPFAPYKFFDILTGKQQQNAKTMSYVNYDECQVSIEMVDKLLRLYEKKVDFTGK--I 1721
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIG 586
GI+SPY Q+ +++ S + + + +IDGFQG E+++IIIS VR+++ ++G
Sbjct: 1722 GIISPYREQMQMMKKAFRSYFGGTIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVG 1781
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
FL + +R+NVALTRA+ LWILG+ ++L R K +W L+ DA R C
Sbjct: 1782 FLKDFRRMNVALTRAKTSLWILGHHKSLCRNK-LWMNLISDAKTRGCL 1828
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 31/95 (32%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
LN SQA AV+S ++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1310 LNTSQATAVVSTVKNL------GFSLIQGPPGTGKTKTILGIVGYFLSTIRVSPSNVIKN 1363
Query: 76 -------------MKFRTLVCTPTNVAIKELAARV 97
K + L+C P+N A+ EL R+
Sbjct: 1364 PTQVGNISTEQLLQKQKVLICAPSNAAVDELVLRL 1398
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 152/267 (56%), Gaps = 5/267 (1%)
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+ +VIDEAAQ E + IPL+ + +L GD QLP V S+ + + +SLF R+
Sbjct: 1389 DTVVIDEAAQAVELSTLIPLRYECTR-CILVGDPKQLPPTVLSQEAERRQYAQSLFVRMF 1447
Query: 426 YLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+ HLLSIQYRMHP IS FP++ FY ++ D + ++ + + + ++GP+ F
Sbjct: 1448 NASPDRVHLLSIQYRMHPDISLFPSTAFYGRQLIDGPQMASKTLQP-WHNTQLFGPFRFF 1506
Query: 485 NVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+V E HS +N E M++ L A + + +G VS Y AQV ++
Sbjct: 1507 HVDALEEPGRSHSIQNQSEAYTAMQVYEALC-ACAQTSLRGRVGFVSMYKAQVDLLRTLF 1565
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
S+Y +A V S+DGFQG E+D+II+S VRSN +GFLS+ +R+NVALTRAR
Sbjct: 1566 VSQYGRAAAMDVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTRARSN 1625
Query: 605 LWILGNARTLTRKKSVWEALVHDANAR 631
+ ++GNA L ++W ++ +A +R
Sbjct: 1626 MIVIGNASMLG-NDTIWRDMISEARSR 1651
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 35/133 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK---------- 77
LN+ QA+AV++ +R LI GPPGTGKTKT+ L+ L +
Sbjct: 1152 LNEPQARAVVATMR------TPGFSLIQGPPGTGKTKTIRALVASFLSRRAGTSVGPKKA 1205
Query: 78 ---------FRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
R L+C P+N AI EL +R +K+ V+ D + + ++ LG +E
Sbjct: 1206 AAPARDGPSARMLLCAPSNAAIDELVSR----IKDGVDIDGKRV----VPRLVRLGRDE- 1256
Query: 129 LKVDSGVEEIYLD 141
V+ V ++ LD
Sbjct: 1257 -AVNPAVRDVTLD 1268
>gi|16945408|emb|CAC10094.2| related to SEN1 protein [Neurospora crassa]
Length = 2126
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 171/318 (53%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1521 ARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 1579
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + +SLF R+ + K HLL QYRMH
Sbjct: 1580 PLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK-NHEKDVHLLDTQYRMH 1637
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
P IS FP + FYE ++D + K S + + + GPY F +V G +E + S N
Sbjct: 1638 PEISSFPRAAFYEGLLQDGDDMAK-SRLQPWHRSTLLGPYRFFDVRGSQERGPKNQSLVN 1696
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V M++ + + K IGI++PY AQ+ ++ + ++ ++ ++ +
Sbjct: 1697 EEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQFAQRFGDAITDEIEFNT 1756
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 1757 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGE-F 1815
Query: 621 WEALVHDANARQCFFNAD 638
W L+ D+ R + +
Sbjct: 1816 WAKLIEDSKRRDRYTTGN 1833
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 39/142 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL +
Sbjct: 1314 LNPGQAKAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAI 1367
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLL 123
LVC P+N A+ EL R+ VK ++ + +++ L
Sbjct: 1368 GRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVK------TQNGTTHQI-EVVRL 1420
Query: 124 GNNERLKVDSGVEEIYLDYRVK 145
G ++ ++S V+++ LD VK
Sbjct: 1421 GRSD--AINSAVKDVTLDELVK 1440
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 149/262 (56%), Gaps = 8/262 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E +P+ L G KH +L GD QL +V + + +A +SLFER+ +
Sbjct: 611 VLIDEATQAIEPECLLPM-LKGAKHVILVGDHRQLGPVVTCRDTAKAGLNKSLFERMVSM 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T R + F P F+N
Sbjct: 670 GIRPIRLQVQYRMHPDLSIFPSNTFYEGTLQNGVTFNDRQFHGEFPWPNKNKPLMFLNSC 729
Query: 488 GGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G E S N E +++ I+ L KA + ++ IGI++PY Q I + L
Sbjct: 730 GVEEISSSGTSYLNRQETALIEDIVFRLIKAKVKPEQ---IGIITPYKGQRFYIGDYLSK 786
Query: 547 K-YVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
+N + +++ S+DGFQG E+D IIIS VRSN IGFL++ +R+NVA+TRAR+
Sbjct: 787 NGRLNHVLYRQIEIASVDGFQGREKDYIIISCVRSNECQGIGFLTDPRRLNVAITRARYG 846
Query: 605 LWILGNARTLTRKKSVWEALVH 626
L I+GNA+ L R ++W L++
Sbjct: 847 LIIVGNAKVLAR-DNLWNNLLN 867
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 13/76 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------MKFRTL 81
LN Q +AV L+Q C LI GPPGTGKT T + ++ L++ + + L
Sbjct: 442 LNYYQVEAVKKALQQPLC-------LIQGPPGTGKTFTSTAIIYHLVKNIQKSGQRGQVL 494
Query: 82 VCTPTNVAIKELAARV 97
VC P+N+ + +LA R+
Sbjct: 495 VCAPSNIVVDQLAERI 510
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 159/282 (56%), Gaps = 23/282 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL +L
Sbjct: 604 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 662
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRMHP +S FP++ FYE +++ T R E+ P+ P F
Sbjct: 663 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 722
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VV 538
+G REE +S N VE V KI+ L+K I ++ IG+++PY Q +
Sbjct: 723 YG-REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFM 778
Query: 539 AIQEKLGSK---YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
++ L K Y+N V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+N
Sbjct: 779 SVNSTLLDKRDQYLN-----VEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLN 833
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
VALTRA++ L ILGN R+L R + +W L+ + C +
Sbjct: 834 VALTRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 874
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 438 PKLTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLNKQKI 489
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ LAA +VV+L +S E
Sbjct: 490 LVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSRE 522
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 155/282 (54%), Gaps = 17/282 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL +L
Sbjct: 570 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 628
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP +S FP++ FYE +++ T + R E+ P+
Sbjct: 629 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSKDRLVEEAMFPWPVLDTPMMFWAN 688
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
GREE +S N VE V +I+ L+K I ++ IG+++PY Q + + +
Sbjct: 689 YGREELSGSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 745
Query: 546 SKYVNSA-------GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
+NS V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NVAL
Sbjct: 746 ---INSTILDKRDQYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 802
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
TRA++ L ILGN R L R K +W L+ + C + D
Sbjct: 803 TRAKYGLLILGNPRALCRNK-LWNHLLIHFREKGCLVDGPLD 843
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L + K +
Sbjct: 404 PKLTE-LNISQTNAVRSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSRSNKEKI 455
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ LAA +VV+L +S E
Sbjct: 456 LVCAPSNVAVDHLAAKLDTLGLKVVRLTAKSRE 488
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 13/296 (4%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
++ L++A + T + VA +P +++DEA Q E E IPL L G +L
Sbjct: 719 IEDIFLRKADVICCTCAGGGDRRIVAGKPYRTVLVDEATQATEPEILIPLVL-GANQVIL 777
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD CQL +V K + A SLFERL G L +QYRMHP++S FP++ FYE
Sbjct: 778 VGDHCQLGPVVMCKKAANAGLAHSLFERLVVHGVRPVRLQVQYRMHPALSEFPSNTFYEG 837
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG--GREEFIEH--SCRNMVEVSVVMKIL 511
+++ T +R E+ + P P + + GREE S N E + V KI+
Sbjct: 838 SLQNGVTAAER--EQPAVDFPWPNPEVPMLFYASMGREEMAASGSSYLNRTEAANVEKIV 895
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEE 569
+A I + IGI++PY Q I + + F A++V S+D FQG E+
Sbjct: 896 TRFMRAGITPDQ---IGIITPYEGQRAHIVQYMNFHGAARRSFYEALEVASVDSFQGREK 952
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
D II+S RSN+ IGFL++ +R+NVALTRA++ L ++GN R L+ K+++W L+
Sbjct: 953 DYIILSCTRSNDHQGIGFLNDPRRLNVALTRAKYGLILVGNPRALS-KQALWHNLL 1007
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 14/97 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ A+ + L+Q + LI GPPGTGKT T + L+ L+Q + + LVC P+N
Sbjct: 589 LNHSQLNAIRTVLQQ-------PLSLIQGPPGTGKTVTSATLVYHLVQQRGQVLVCAPSN 641
Query: 88 VAIKELAAR-------VVKLVKESVERDCRDALFFPL 117
+A++ LA R VV++ ++ E+ DA F L
Sbjct: 642 IAVEHLAQRIHLTGVKVVRVAAKTREQLEGDASFLSL 678
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 180/345 (52%), Gaps = 16/345 (4%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS--YML 357
L KRR+ + +SS N E ++ ++ L +A + +T S S M
Sbjct: 1528 LMKRRAHIGARIEADKSSGNTFQR----EVEIKRRQVQQEILDKAQVLCATLSGSGHEMF 1583
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
++ +E ++IDEAAQ E + IPL+ G +L GD QLP V S+ + +
Sbjct: 1584 KNLNVE-FETVIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYD 1641
Query: 418 RSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLF R+ ++K HLL +QYRMHP IS FP+ FYE ++D + + + H
Sbjct: 1642 QSLFVRMQK-NHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQP--WHQ 1698
Query: 476 PMY-GPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPY 533
+Y GPY F +V G + + S N E+ V MK+ + + + IGI++PY
Sbjct: 1699 SVYLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMKLYQRFRSDYSNVDARGKIGIITPY 1758
Query: 534 SAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
AQ+ ++++ KY ++ + D FQG E ++II S VR++ G IGF+++ +R
Sbjct: 1759 KAQLHRLRQRFTDKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRR 1818
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
+NV LTRA+ LWILG++R L ++ W L+ DA R + +
Sbjct: 1819 MNVGLTRAKSSLWILGDSRAL-QQGEYWNKLIEDAKERDRYTTGN 1862
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 39/142 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ L+ GPPGTGKTKT+ ++ LL +
Sbjct: 1344 LNLGQAKAILNA------KENDGFTLVQGPPGTGKTKTIVAMVGCLLSNSLKGSNGAVSI 1397
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLL 123
LVC P+N A+ EL R+ + VK + + ++L L
Sbjct: 1398 PRPGLTAKPTTAPARKLLVCAPSNAAVDELVLRLKQGVK------TMNGTHHKI-EVLRL 1450
Query: 124 GNNERLKVDSGVEEIYLDYRVK 145
G + +++GV+++ LD +VK
Sbjct: 1451 GRTD--AINAGVKDVTLDEQVK 1470
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 183/349 (52%), Gaps = 21/349 (6%)
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL 346
EGL+K+ V + L +++++ P A + + E L++ +A
Sbjct: 693 EGLAKAGVNVIRLGRPEAVRPDLARYQIENAIP----PGATKHEAYEAQLRAVRYAQAIC 748
Query: 347 FLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
+ + S L + NF +++DEA+Q+ E S +PL +G + VL GD QLP
Sbjct: 749 ATCSGAGSDFLDRI-----NFSAVMLDEASQVTEPMSLVPLA-NGCQQLVLVGDHKQLPP 802
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V S+ + A SLF+RL+ G +LL Q+RMHP+IS FP+ FY ++ + +
Sbjct: 803 TVVSREAELAGMTLSLFDRLTRAGVKPYLLDTQFRMHPAISHFPSHSFYNGLVKSGTPAK 862
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKE 523
R K F P +F +E ++ S N VE V++ILL + A
Sbjct: 863 DRPAPKGFQWPIPSVPIAFCPTPENSKETNDNLSYSNRVEAERVLEILLGVLSA--GELR 920
Query: 524 KLSIGIVSPYSAQVVAIQEKLGSKYV------NSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+GIV+PY+AQV I+ L + V ++ ++V S+DG+QG E++L+I+STV
Sbjct: 921 PCHVGIVTPYAAQVKLIRSMLRQRGVRTGVDRDTGEAGIEVSSVDGYQGREKELMIVSTV 980
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
R+N+ +IGF+++++R NV LTRAR + ++G+A TL++ + W V
Sbjct: 981 RANDLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSKDRRTWGPWVR 1029
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 154/278 (55%), Gaps = 5/278 (1%)
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
ML VA + +VIDEAAQ E + IPL+ G K ++ GD QLP V S+ +++
Sbjct: 1739 MLSGVAFD-FETVVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQQADKLG 1796
Query: 416 FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
+ +SLF R+ + HLLSIQYRMHP IS FP+ FY++K++D + + + + +
Sbjct: 1797 YSQSLFVRMFERAPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPDMAELTRQPWHKY 1856
Query: 475 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ P+ F++ HS N E +V + + L IGIV+ Y
Sbjct: 1857 E-LTRPFKFLSTKAPESPGRFHSIINKEEANVALALYERLRTDNPRENFDYRIGIVTMYK 1915
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS-NNGGSIGFLSNSKR 593
AQV ++ +Y + ++DGFQG E+D+II+S VRS SIGFLS+ +R
Sbjct: 1916 AQVFELKRTFQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLSDRRR 1975
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
+NVA+TRA+ L+I+GNA L R ++WE+LV A R
Sbjct: 1976 LNVAVTRAKSNLFIIGNAEHLRRGDAIWESLVAAAEQR 2013
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 25/89 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK---------- 77
+N+ QA+A+L L LI GPPGTGKTKT+ L+ + +
Sbjct: 1500 VNEPQARAILGSL------ATGGFSLIQGPPGTGKTKTICALIGAFVSRRKGPSTSVQAG 1553
Query: 78 ---------FRTLVCTPTNVAIKELAARV 97
+ L+C P+N AI E+A R
Sbjct: 1554 QAQGKVGATKKILLCAPSNAAIDEVAKRA 1582
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 156/285 (54%), Gaps = 23/285 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL L
Sbjct: 594 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAGDAGLKQSLFERLVVL 652
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T ++R E P+ P F
Sbjct: 653 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTAKQRLIENSIFPWPVLDNPMMFWAN 712
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE +S N VE V KI+ L+K D E IG+++PY Q I +
Sbjct: 713 YG-REEISGSGNSFLNRVEAMNVEKIITKLFK---DGIEPSQIGVITPYEGQRAYIVQYM 768
Query: 543 -------KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
+L KY+ V++ S+D FQG E+D II+S VR+N+ IGFLS+ +R+N
Sbjct: 769 SMNSTLTELKEKYL-----EVEITSVDAFQGREKDFIILSCVRANDSQVIGFLSDPRRLN 823
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
VALTRA++ L ILGN R L R ++W L+ + C + D
Sbjct: 824 VALTRAKYGLVILGNPRALCR-NTLWNHLLIHFREKGCLVDGSLD 867
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P+L+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 428 PNLTE-LNMSQTNAVRSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLSKEKI 479
Query: 81 LVCTPTNVAIKELA-------ARVVKLVKESVE 106
LVC P+NVA+ LA +V++L +S E
Sbjct: 480 LVCAPSNVAVDHLADKLNLLGLKVIRLTAKSRE 512
>gi|336264808|ref|XP_003347180.1| hypothetical protein SMAC_05480 [Sordaria macrospora k-hell]
gi|380093874|emb|CCC08839.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 2146
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1526 ARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 1584
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + +SLF R+ + K HLL QYRMH
Sbjct: 1585 PLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK-SHEKDVHLLDTQYRMH 1642
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
P IS FP FYE ++D + K S + + + GPY F +V G +E + S N
Sbjct: 1643 PEISSFPREAFYEGLLQDGDGMAK-SRLQPWHRSALLGPYRFFDVRGLQERGPKNQSLVN 1701
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V M++ + D K IGI++PY AQ+ ++ + ++ ++ ++ +
Sbjct: 1702 EEELKVAMQLYRRFKADYGDVDLKGKIGIITPYKAQLHRLRSQFAQRFGDAITDEIEFNT 1761
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 1762 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGE-F 1820
Query: 621 WEALVHDANARQCFFNAD 638
W L+ D+ R + +
Sbjct: 1821 WAKLIEDSKKRDRYTTGN 1838
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 38/146 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL +
Sbjct: 1320 LNPGQAKAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAI 1373
Query: 81 ----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
LVC P+N A+ EL R+ VK ++ + +++ LG
Sbjct: 1374 GRPGLGAAKNAPSKKLLVCAPSNAAVDELVLRLKNGVK------TQNGTTHKI-EVVRLG 1426
Query: 125 NNERLKVDSGVEEIYLDYRVKRLADC 150
++ +++GV ++ LD VK D
Sbjct: 1427 RSD--AINAGVRDVTLDELVKAKMDA 1450
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 192/347 (55%), Gaps = 35/347 (10%)
Query: 336 LKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+++ L A + ST S + M+ ++ ++ + +VIDEA Q E + IPL+ G +
Sbjct: 1482 IQAQILNEAEIICSTLSGAAHDMVANIGIK-FDSVVIDEACQCTELSAIIPLRY-GCQRC 1539
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLL-SIQYRMHPSISCFPNSYF 452
++ GD QLP V S V+ E+ + +SLF R++ +SK LL +QYRMH IS FP+ F
Sbjct: 1540 IMVGDPNQLPPTVLSSVAAESKYDQSLFVRMT--SHSKPLLLDVQYRMHSDISKFPSKKF 1597
Query: 453 YENKIRDSSTV---RKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVV 507
Y+ ++D ++ KR + K + PY F ++ G+E S N +E+ +
Sbjct: 1598 YDGHLQDGPSMDVLTKREWHKNV----SFPPYRFYDIAEGKESQNSKTFSYVNKMEIKIA 1653
Query: 508 MKILLNLYKAW--IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
++++ LY + ID + K IG+++PY Q AIQ+ + N + +IDGFQ
Sbjct: 1654 IELIDTLYTKFGRIDYRNK--IGVITPYKEQNRAIQQAFIRHFGNQIRGDITFNTIDGFQ 1711
Query: 566 GGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
G E+++II+S VR++ N +GFL + +R+NVALTR++ LWILG+ +L K +W L
Sbjct: 1712 GQEKEIIIMSCVRADSNKSGVGFLKDFRRMNVALTRSKCSLWILGHNNSLV-KNDLWSDL 1770
Query: 625 VHDANARQCF------FNADDDKDLGKAILAVKKELDELDELLNPES 665
+ DA R F F ++ ++ + + +A D L+E NP+S
Sbjct: 1771 ITDAKDRNMFETVYYGFTSNSNRSIKPSTVA-----DNLEE--NPQS 1810
>gi|403367086|gb|EJY83352.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1679
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 38/322 (11%)
Query: 339 FCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLF 396
+ RA + +T S S L + + +L++DEA Q E + IP + K +L
Sbjct: 1117 MIINRAQIICTTLSMSVSDKLEIIKQGDIEYLIVDEACQCVELTNLIPFEHEP-KKVILV 1175
Query: 397 GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENK 456
GD+ QLPA S S++ + RSLFER G +K +LSIQYRMHPSI FP++ FYE
Sbjct: 1176 GDQQQLPATTFSDNSDKTFYSRSLFERFLNCGVNKFMLSIQYRMHPSIRQFPSNQFYEGG 1235
Query: 457 IRDSSTVRKRSYE-------KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMK 509
++DS +V +R + R L+ + F ++ G+E + S N E ++
Sbjct: 1236 LKDSESVIQRQQDFSTLPVGLRVLNQTVSN-LIFFDLKYGQESVNDTSKSNKDEAQFILT 1294
Query: 510 ILLNLYK------------AWIDSKE----------KLSIGIVSPYSAQVVAIQEKLGSK 547
+ ++ K A ++S + + +GI+SPY +QV +++ +
Sbjct: 1295 LFQDIIKIILQKASQTDFPANVNSDDQKMKHILGDLRQRVGIISPYKSQVRTLKDYMYP- 1353
Query: 548 YVNSAGFA---VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
++ GF +++ ++D +QG E+D+IIIS VR + +GFL++ +R+NVA+TRARH
Sbjct: 1354 FLKKNGFPIDLIEINTVDAYQGREKDIIIISCVRGSQERQLGFLNDYRRMNVAVTRARHF 1413
Query: 605 LWILGNARTLTRKKSVWEALVH 626
LW++GN+ TL R K+ W V
Sbjct: 1414 LWVVGNSTTLNRNKN-WNNFVE 1434
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
+ F + S NDSQ +A+ ++ + D LI GPPGTGKT T+ +L +L+
Sbjct: 881 QAFVYNFRSNFNDSQREALEQVVKMKKED----FLLIQGPPGTGKTHTIQGILGMLISSN 936
Query: 78 FRT-LVCTPTNVAIKELAARVVK-----LVKESVERD------CRDALFFPLGDILLLGN 125
+ L+C P+N AI E+ R+V L+ ES RD D PL +L
Sbjct: 937 VKKILICGPSNAAIDEILIRIVTHKLFGLLNESQLRDKLLRVGSMDYEPLPLVKKYIL-- 994
Query: 126 NERLKVDSGVEE 137
+E+++ + G EE
Sbjct: 995 DEKIREEMGDEE 1006
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 181/331 (54%), Gaps = 15/331 (4%)
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKD---LLEDLLKSFCLKRASLFLSTASSSYMLHS 359
R+ E + L+KLQ +E S+V++ +L+ L + L+ A + T +
Sbjct: 537 RKMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRL 596
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
V ++ + ++IDE+ Q E E +P+ L G+K +L GD CQL +V K + A +S
Sbjct: 597 VRLK-FHSILIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMCKKAARAGLSQS 654
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL LG L +QYRMHP +S FP+++FYE +++ +R K P+
Sbjct: 655 LFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVID 714
Query: 480 PYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
F +V G+EE S N E + V KI ++ + ++ IG+++PY Q
Sbjct: 715 RPMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQ---IGVITPYEGQR 771
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V + GS + + +++ S+D FQG E+D+II+S VRSN IGFL++ +R+
Sbjct: 772 AYLVQYMQYQGSLHSKTYQ-EIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 830
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALV 625
NVALTRA++ + I+GN + L+ K+ +W L+
Sbjct: 831 NVALTRAKYGIIIVGNPKVLS-KQPLWNHLL 860
Score = 47.0 bits (110), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 442 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ K V R C R+A+ P+ + L +++ ++ ++++
Sbjct: 495 NTAVDQLTEKIHK-TNLKVVRLCAKSREAIDSPVSFLALHNQIRKMEANTELQKL 548
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 181/331 (54%), Gaps = 15/331 (4%)
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKD---LLEDLLKSFCLKRASLFLSTASSSYMLHS 359
R+ E + L+KLQ +E S+V++ +L+ L + L+ A + T +
Sbjct: 542 RKMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRL 601
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
V ++ + ++IDE+ Q E E +P+ L G+K +L GD CQL +V K + A +S
Sbjct: 602 VRLK-FHSILIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMCKKAARAGLSQS 659
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL LG L +QYRMHP +S FP+++FYE +++ +R K P+
Sbjct: 660 LFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVID 719
Query: 480 PYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
F +V G+EE S N E + V KI ++ + ++ IG+++PY Q
Sbjct: 720 RPMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQ---IGVITPYEGQR 776
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V + GS + + +++ S+D FQG E+D+II+S VRSN IGFL++ +R+
Sbjct: 777 AYLVQYMQYQGSLHSKTYQ-EIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 835
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALV 625
NVALTRA++ + I+GN + L+ K+ +W L+
Sbjct: 836 NVALTRAKYGIIIVGNPKVLS-KQPLWNHLL 865
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 447 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 499
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ K V R C R+A+ P+ + L +++ ++ ++++
Sbjct: 500 NTAVDQLTEKIHK-TNLKVVRLCAKSREAIDSPVSFLALHNQIRKMEANTELQKL 553
>gi|326677548|ref|XP_690945.4| PREDICTED: probable helicase senataxin [Danio rerio]
Length = 2310
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 178/339 (52%), Gaps = 46/339 (13%)
Query: 337 KSFCLKRASLFLSTASSSYML------HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGI 390
++ L+ A + T S+S + + EP + ++IDEA+Q KE+E+ IP+ L
Sbjct: 1835 QALVLQNAHVICCTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAKETETLIPM-LYRC 1893
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-------LLSIQYRMHPS 443
+L GD QLP V S+ + E F +SL RL + + LLS+QYRMHP
Sbjct: 1894 PSVILVGDPNQLPPTVVSQKAKEFGFDQSLMARLCKSLHPSNSKLPPILLLSMQYRMHPD 1953
Query: 444 ISCFPNSYFYENKIRDSSTVRKRSYEK----------RFLHGPM--------------YG 479
I FP+ Y Y + +++ + R ++ R L GP +
Sbjct: 1954 ICEFPSKYIYNSALKNDWQGQCRQEQEIRTVSEFRLLRSLSGPCVCETAQKRCSLSWPFK 2013
Query: 480 PYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
PY +V GRE S N EVS+V +L L K ++ + +G+++PY+AQ
Sbjct: 2014 PYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCK-----EQAVRVGVITPYNAQKHR 2068
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR-SNNGGSIGFLSNSKRVNVAL 598
I + + + +N V+V ++DGFQG E D II+S VR S+ GSIGF+ N +R+NV +
Sbjct: 2069 ILDAIKTSGINKQ-LQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRMNVTI 2127
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
TRA+ L+ILG+ RTL R++S W AL+ DA R+C N
Sbjct: 2128 TRAKFSLFILGHLRTL-REQSDWGALIEDAGRRECIINT 2165
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 21 GPSL--SSTLNDSQAQAVLSCLRQMRCDHKAT-IQLIWGPPGTGKTKTVSMLLVILL--- 74
GPS + N QA+A+ + + K LI GPPGTGK+KT+ LL LL
Sbjct: 1620 GPSDLDAPEFNRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLLYKLLSSA 1679
Query: 75 -------------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCR--DALFFPLGD 119
+ R L+C P+N AI L +V+ + KE CR +A GD
Sbjct: 1680 TNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKKVILIFKEK----CRNINAPQGNCGD 1735
Query: 120 ILLLG-NNERLKVDSGVEEIYLDYRVKRLA 148
I L+ NER + ++ LD++ K A
Sbjct: 1736 INLVRLGNERT-ISKSLKPFSLDHQTKARA 1764
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 167/303 (55%), Gaps = 10/303 (3%)
Query: 341 LKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L +A + +T S S M ++ +E ++IDEAAQ E + IPL+ G +L GD
Sbjct: 1541 LDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALIPLKY-GCSKCILVGD 1598
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENK 456
QLP V S+ + + +SLF R+ ++K HLL +QYRMHP IS FP+ FYE
Sbjct: 1599 PKQLPPTVLSQSAARYGYDQSLFVRMQK-NHAKDVHLLDMQYRMHPEISRFPSQEFYEGL 1657
Query: 457 IRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLY 515
++D + + + + + + GPY F +V G + + S N E+ V M++
Sbjct: 1658 LQDGADMGRLRLQP-WHESELLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMQLYRRFR 1716
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ + K IGI++PY AQ++ ++++ KY ++ + D FQG E ++II S
Sbjct: 1717 TDYGKVELKGKIGIITPYKAQLLRLRQRFTEKYGEGITEEIEFNTTDAFQGRECEIIIFS 1776
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
VR++ G IGF+++ +R+NV LTRA+ LWILG++R L + + W L+ DA R +
Sbjct: 1777 CVRASPTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE-FWSKLIEDAKRRDRYT 1835
Query: 636 NAD 638
+ +
Sbjct: 1836 SGN 1838
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 38/145 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL ++
Sbjct: 1321 LNPGQARAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSSNAVPL 1374
Query: 81 ----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
LVC P+N A+ EL R+ VK + F + ++L LG
Sbjct: 1375 SRPGAASANQAPSKKLLVCAPSNAAVDELVLRLKAGVK------TMNGTFHKI-EVLRLG 1427
Query: 125 NNERLKVDSGVEEIYLDYRVKRLAD 149
++ +++ V+++ LD VK D
Sbjct: 1428 RSD--AINAAVKDVTLDELVKARLD 1450
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K VL GD QL ++ + + +A +SLFERL L
Sbjct: 567 VLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL 625
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ + P++ P F
Sbjct: 626 GHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWAN 685
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E KI+ L+K D + IG+++PY Q + +
Sbjct: 686 YG-REEISGNGTSYLNRIEAMNCEKIITRLFK---DGVKPEQIGVITPYEGQRAYVVQYM 741
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ S V+V S+D FQG E+D II+S VR+N +IGFLS+ +R+NVALTRA+
Sbjct: 742 QMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAK 801
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R L+R S+W L+ + C
Sbjct: 802 YGLIILGNPRALSR-NSLWSHLLLHFREKGCL 832
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC P+
Sbjct: 407 LNQSQSNAVKHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPS 459
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ LAA +VV+L +S E
Sbjct: 460 NVAVDHLAAKLHSMGLKVVRLTAKSRE 486
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 169/336 (50%), Gaps = 43/336 (12%)
Query: 321 LNLPSAVEKDLLEDLLKSFC--------------------LKRASLFLSTASSSYMLHSV 360
+ P AV +DL++ +++S L+RA + +T + + S
Sbjct: 726 IGRPEAVRQDLMQFMVESIAGIEPGSNMSKDQQYQAINGVLRRAEVVCATCAGA---GSD 782
Query: 361 AMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+E +F +IDEA Q E + +PL G VL GD+ QLP + S+ ++ A G
Sbjct: 783 ILERFSFQACLIDEATQATEPATVVPL-TKGCSQVVLIGDQKQLPPTIISREADAAGLGT 841
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
SLFER+ G +L +QYRMHP+I+ +P+ FY + + R F
Sbjct: 842 SLFERMLARGIRAFMLKVQYRMHPAIAAYPSKAFYSGALLSGTPPSARRAPMGFDWPVPA 901
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL--SIGIVSPYSAQ 536
P +F++V G E S N VE V +N+ K + + IGIV+PYSAQ
Sbjct: 902 VPLAFVDVPDGYERSDGSSQTNPVEAQKV----VNIVKKLAAGHDVIFGEIGIVTPYSAQ 957
Query: 537 VVAIQEKL-GSKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
V AI+ L G+K + F A++V S+DGFQG E+++I+ R+N G++
Sbjct: 958 VRAIKRLLNGNKPEVRSRFDAPADPNTLQALEVCSVDGFQGREKEVIVFCCTRANPNGNV 1017
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
GFL++ +RVNV LTRAR L I+GN TL R VW
Sbjct: 1018 GFLADPRRVNVMLTRARRGLIIIGNLGTLRRDPEVW 1053
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 16/90 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP-T 86
+N SQ A+ + L Q + LI GPPGTGKT T L+ + L+ + ++CT +
Sbjct: 653 MNKSQTDALEAALFQR-------VTLIQGPPGTGKTHTAVALVQMWLRNRTSPILCTSDS 705
Query: 87 NVAIKEL-------AARVVKLVK-ESVERD 108
N+A+ L RV ++ + E+V +D
Sbjct: 706 NIAVDNLVDGLSRAGVRVARIGRPEAVRQD 735
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 151/276 (54%), Gaps = 11/276 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL +L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP +S FP++ FYE +++ T R E PM
Sbjct: 661 GHVPIRLEVQYRMHPCLSDFPSNMFYEGSLQNGVTSDDRLIEDATFPWPMVDTPMMFWAN 720
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE--K 543
GREE +S N VE V KI+ L+K + + IG+++PY Q + +
Sbjct: 721 YGREELSSSGNSFLNRVEAMNVEKIITRLFKDGVTPDQ---IGVITPYEGQRAYLVQFMS 777
Query: 544 LGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ S ++ V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NVALTRA
Sbjct: 778 MNSTLLDKRDQYLDVEITSVDAFQGREKDFIILSCVRANDAQSIGFLSDPRRLNVALTRA 837
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
++ L +LGN R L R + +W L+ + C +
Sbjct: 838 KYGLIVLGNPRALCRNR-LWNCLLVHFREKGCLVDG 872
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P+L+ LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 436 PALTE-LNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLNKEKI 487
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ LA +VV+L +S E
Sbjct: 488 LVCAPSNVAVDHLAEKLDLLGLKVVRLTAKSRE 520
>gi|328866781|gb|EGG15164.1| Regulator of nonsense transcripts 1 like protein [Dictyostelium
fasciculatum]
Length = 1358
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 161/277 (58%), Gaps = 19/277 (6%)
Query: 337 KSFCLKRASLFLSTAS--SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
K ++ A + L+T S +S +L + + ++IDE+ Q E + IPL L+ +
Sbjct: 590 KKRMIREARILLTTLSGAASKILDASP----SVIIIDESTQSCEPSTLIPLLLNPNSKVI 645
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLS-YLGYSKHLLSIQYRMHPSISCFPNSYFY 453
L GD QLP V SK+S+ + SLFERLS YL H+L QYRMHPSIS FP+ FY
Sbjct: 646 LIGDPKQLPPTVFSKISSRHGYNVSLFERLSNYLPV--HMLDTQYRMHPSISKFPSQRFY 703
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILL 512
++K++D V K Y F + YGP +F N+ +E +S +N++E V +L
Sbjct: 704 QSKLKDGENVVK--YTNSFYNNAKYGPINFYNIPESQEVSENGNSLKNILESKYVFVLLK 761
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLI 572
L + + + K K+S+GI++PY Q +E L ++ + V V ++DGFQG E+D+I
Sbjct: 762 KLVQEYPEVK-KMSVGIITPYKLQK---KELLEARGAFNEKMDVVVNTVDGFQGAEKDII 817
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
I S VR+ IGFLS+ +R+NV +TRAR ++++G
Sbjct: 818 IFSCVRNKR---IGFLSDIRRINVGITRARKAIYVVG 851
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI---LLQMKFRTLVCT 84
LN SQ A+ + Q + LI GPPGTGKT + LL I +L K LVC
Sbjct: 483 LNPSQLSAIQKSMIQ------DELTLIQGPPGTGKTTIILNLLRIFHSILGEKETILVCA 536
Query: 85 PTNVAIKEL 93
P+N A+ E+
Sbjct: 537 PSNTAVDEV 545
>gi|347832212|emb|CCD47909.1| similar to similar to tRNA-splicing endonuclease [Botryotinia
fuckeliana]
Length = 2019
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S L +V +E ++IDEAAQ E + IPL+ K +L GD QLP V S+
Sbjct: 1559 SGSGHDFLRNVNVE-FETVIIDEAAQCIELSALIPLKYGATK-CILVGDPEQLPPTVLSR 1616
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
++ + +SLF R+ HLL QYRMHP IS FP+ FY +++ D + +
Sbjct: 1617 LAKSYGYEQSLFVRMQRNHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRV 1676
Query: 469 EKRFLHGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
+ + + GPY F +V G + +E HS N+ E++ +++ L + + I
Sbjct: 1677 QP-WHASSILGPYRFFDVVGVQSKEARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI 1735
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
GI++ Y AQ+ ++ + G+K+ + ++ + D FQG E ++II S VR+ G IGF
Sbjct: 1736 GIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGF 1795
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
L++ +R+NV LTRA+ LW+LG++R L + + W L+ DA +R+ + + D
Sbjct: 1796 LNDIRRMNVGLTRAKSSLWVLGDSRALEQGE-FWNRLIQDAKSRERYTSGD 1845
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 200/376 (53%), Gaps = 31/376 (8%)
Query: 275 EELEELLSH-SVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLE 333
E+ E L+SH S+ + ++ ++ L K+ +E +L K F++L EK ++E
Sbjct: 483 EDAESLVSHLSLHNLIVQTNKRLQKLQDKKNAEGE-LLAKEAVEFHKLT--RKAEKSVME 539
Query: 334 D--LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIK 391
D ++ S C+ + + L S+ + +IDE+ Q E E IP+ + G K
Sbjct: 540 DCEVICSTCV---------GAGDHRLDSMVFRAV---LIDESTQASEPEIMIPI-VKGAK 586
Query: 392 HAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSY 451
+L GD QL ++ K + +A +SLFERL LG+ L +QYRMHP +S FP++
Sbjct: 587 QVILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMHPCLSEFPSNM 646
Query: 452 FYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINVFGGREEFIE--HSCRNMVEVSVVM 508
FYE +++ + R+++ P+ P F +G REE +S N VE V
Sbjct: 647 FYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFWANYG-REEISASGYSYLNRVEAMNVE 705
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL---GSKYVNSAGFA-VKVMSIDGF 564
KI+ L+K + +++ IG+V+PY Q I + + GS ++ V+V S+D F
Sbjct: 706 KIITRLFKQGVKAEQ---IGVVTPYEGQRAYILQHMLLTGSLVDKREQYSEVEVASVDAF 762
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E+D II+S VR+N IGFLS+S+R+NVALTRA++ L I+GN R L++ K +W L
Sbjct: 763 QGREKDYIILSCVRANETHGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNK-LWNHL 821
Query: 625 VHDANARQCFFNADDD 640
+ + C D
Sbjct: 822 LIHFREKGCLVEGPLD 837
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 26/97 (26%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-------- 73
P+L++ LN+SQ AV + L++ + LI GPPGTGKT T + ++ L
Sbjct: 382 PNLTA-LNESQENAVRTVLQR-------PLSLIQGPPGTGKTFTSATIIYHLRNMINKKP 433
Query: 74 ----------LQMKFRTLVCTPTNVAIKELAARVVKL 100
Q + LVC P+NVA+ LA ++ L
Sbjct: 434 SGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANL 470
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 161/291 (55%), Gaps = 6/291 (2%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S L +V +E ++IDEAAQ E + IPL+ K +L GD QLP V S+
Sbjct: 1559 SGSGHDFLRNVNVE-FETVIIDEAAQCIELSALIPLKYGATK-CILVGDPEQLPPTVLSR 1616
Query: 410 VSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
++ + +SLF R+ HLL QYRMHP IS FP+ FY +++ D + +
Sbjct: 1617 LAKSYGYEQSLFVRMQRNHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRV 1676
Query: 469 EKRFLHGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
+ + + GPY F +V G + +E HS N+ E++ +++ L + + I
Sbjct: 1677 QP-WHASSILGPYRFFDVVGVQSKEARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI 1735
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
GI++ Y AQ+ ++ + G+K+ + ++ + D FQG E ++II S VR+ G IGF
Sbjct: 1736 GIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGF 1795
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
L++ +R+NV LTRA+ LW+LG++R L + + W L+ DA +R+ + + D
Sbjct: 1796 LNDIRRMNVGLTRAKSSLWVLGDSRALEQGE-FWNRLIQDAKSRERYTSGD 1845
>gi|164429654|ref|XP_964658.2| hypothetical protein NCU02036 [Neurospora crassa OR74A]
gi|157073565|gb|EAA35422.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 682
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 172/318 (54%), Gaps = 10/318 (3%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E ++ ++ L +A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 213 ARETEIKRRQVQQEILDKAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALI 271
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMH 441
PL+ G +L GD QLP V S+ + + +SLF R+ + K HLL QYRMH
Sbjct: 272 PLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK-NHEKDVHLLDTQYRMH 329
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH-SCRN 500
P IS FP + FYE ++D + K S + + + GPY F +V G +E ++ S N
Sbjct: 330 PEISSFPRAAFYEGLLQDGDDMAK-SRLQPWHRSTLLGPYRFFDVRGSQERGPKNQSLVN 388
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
E+ V M++ + + K IGI++PY AQ+ ++ + ++ ++ ++ +
Sbjct: 389 EEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQFAQRFGDAITDEIEFNT 448
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
D FQG E ++II S VR++ G IGF+++ +R+NV LTRAR LWILG++R L + +
Sbjct: 449 TDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGE-F 507
Query: 621 WEALVHDANARQCFFNAD 638
W L+ D+ R + +
Sbjct: 508 WAKLIEDSKRRDRYTTGN 525
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 39/142 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
LN QA+A+L+ LI GPPGTGKTKT+ ++ LL +
Sbjct: 6 LNPGQAKAILNA------KENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAI 59
Query: 81 -----------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLL 123
LVC P+N A+ EL R+ VK ++ + +++ L
Sbjct: 60 GRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVK------TQNGTTHQI-EVVRL 112
Query: 124 GNNERLKVDSGVEEIYLDYRVK 145
G ++ ++S V+++ LD VK
Sbjct: 113 GRSD--AINSAVKDVTLDELVK 132
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 179/332 (53%), Gaps = 14/332 (4%)
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLSTASSSYMLHS 359
R ++ + L +LQ NE+ S++++ + L K+ L A + T +
Sbjct: 549 RMNDTNVELTRLQLLKNEVGELSSLDEKKFKQLTKAAEKEILNNADVVCCTCVGAGDPRL 608
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
M+ N L IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +S
Sbjct: 609 AKMKFRNVL-IDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 666
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL LG++ L++QYRMHP ++ FP++ FYE +++ T+++R + P+
Sbjct: 667 LFERLVKLGFAPIRLNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLRKDVDFPWPVVD 726
Query: 480 -PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
P F + G E S N E S V K++ +KA + + IG+++PY Q
Sbjct: 727 TPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPAD---IGVITPYEGQR 783
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V + G+ + + V+V S+D FQG E+D I++S VRSN IGFLS+ +R+
Sbjct: 784 SYIVTTMQNTGT-FKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGFLSDPRRL 842
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVH 626
NVALTRA++ + ILGN + L + + + LVH
Sbjct: 843 NVALTRAKYGIVILGNPKVLAKHELWYHLLVH 874
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 454 LNGSQISAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLAKMNNSQVLVCAPS 506
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 507 NVAVDQLCERV 517
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 162/292 (55%), Gaps = 8/292 (2%)
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
+ S L +V +E ++IDEAAQ E + IPL+ K +L GD QLP V S+
Sbjct: 1558 SGSGHDFLRNVNVE-FETVIIDEAAQCIELSALIPLKYGATK-CILVGDPEQLPPTVLSR 1615
Query: 410 VSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
++ + +SLF R+ + K HLL QYRMHP IS FP+ FY +++ D + +
Sbjct: 1616 LAKSYGYEQSLFVRMQR-NHPKDVHLLDTQYRMHPEISQFPSQQFYNSRLIDGDGMAQLR 1674
Query: 468 YEKRFLHGPMYGPYSFINVFGGR-EEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
+ + + GPY F +V G + +E HS N+ E++ +++ L + +
Sbjct: 1675 VQP-WHASSILGPYRFFDVVGVQSKETKGHSLINVPELNAAIQLYQRLKTDYRSYDFRGK 1733
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
IGI++ Y AQ+ ++ + G+K+ + ++ + D FQG E ++II S VR+ G IG
Sbjct: 1734 IGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIG 1793
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
FL++ +R+NV LTRA+ LW+LG++R L + + W L+ DA +R + + D
Sbjct: 1794 FLNDIRRMNVGLTRAKSSLWVLGDSRALEQGE-FWNRLIQDARSRSRYTSGD 1844
Score = 39.7 bits (91), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 33/97 (34%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
LN+ QA+A+LS + LI GPPG+GKTKT+ ++ LL
Sbjct: 1322 LNNGQAKAILSA------NDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGF 1375
Query: 77 ----------------KFRTLVCTPTNVAIKELAARV 97
K + L+C P+N A+ EL R+
Sbjct: 1376 RPQGQNGGAGAQAQAPKKKLLICAPSNAAVDELVLRL 1412
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 186/348 (53%), Gaps = 25/348 (7%)
Query: 305 SECHFVLRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
S+ LR L NEL N + ++L + ++ L + + ST S S
Sbjct: 1485 SKIQLKLRDLSKKINELGKQRDELRERNAVNYRNRELNKRKAQARILAESDIICSTLSGS 1544
Query: 355 Y--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+L S+ ++ + +++DEA Q E S IPL+ G K ++ GD QLP V S ++
Sbjct: 1545 AHDVLASLGVK-FDTVIVDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAAS 1602
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +SLF R+ HLL +QYRMH IS FP+ FY+ ++++ + + +
Sbjct: 1603 NFKYNQSLFVRMEK-NCKPHLLDVQYRMHSMISAFPSLEFYDGRLKNGPNMDQVNTRPWH 1661
Query: 473 LHGPMYGPYSFINVFGGREE----FIEHSCRNMVEVSVVM-KILLNLYKAWIDSKEKLSI 527
P +GPY F ++ G+++ + + + +VS+ M LL+ Y+ +D K I
Sbjct: 1662 ESQP-FGPYRFFDIITGKQQQNAKTMSYVNYDECQVSIEMIDKLLSQYEKKVDFSGK--I 1718
Query: 528 GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIG 586
GI+SPY Q+ ++ S + + + +IDGFQG E+++IIIS VR+++ G +G
Sbjct: 1719 GIISPYREQMQMMKRAFRSYFGGTIFKYIDFNTIDGFQGQEKEIIIISCVRADDSKGGVG 1778
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
FL + +R+NVALTRA+ LWILG+ ++L + K +W L+ DA R C
Sbjct: 1779 FLKDFRRMNVALTRAKASLWILGHHKSLYKNK-LWMHLISDAKGRDCL 1825
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 40/146 (27%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT----VSMLLVI----------- 72
LN SQA+AV+S ++++ LI GPPGTGKTKT V L
Sbjct: 1307 LNTSQAKAVISSVKKL------GFSLIQGPPGTGKTKTILGVVGFFLTTAKALPSNVIRN 1360
Query: 73 ----------LLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILL 122
+L K + L+C P+N A+ EL V++L + V+ D + LF P ++
Sbjct: 1361 PTESNATSTEMLLQKQKVLICAPSNAAVDEL---VLRLREGLVDTDGK--LFKP--KLVR 1413
Query: 123 LGNNERLKVDSGVEEIYLDYRVKRLA 148
+G ++ V++ + ++ L+ V + A
Sbjct: 1414 IGKSD--AVNAAIRDLTLEELVDKRA 1437
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 168/321 (52%), Gaps = 30/321 (9%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ T+ R P+ P F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSN 704
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + K+ IGI++PY Q +V+ +
Sbjct: 705 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPKD---IGIITPYEGQRSYIVSSMQ 761
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRAR
Sbjct: 762 ANGT-FKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRAR 820
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELL- 661
L ILGN + L+ K +W L+ R C V+ L L E L
Sbjct: 821 FGLVILGNPKVLS-KHPLWNCLLQHFKERHCL---------------VEGPLSNLQESLI 864
Query: 662 ---NPESRLFRSQRWKVNFSE 679
P+ QR++++FS+
Sbjct: 865 QFSRPKQAYRGPQRFQMSFSQ 885
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 424 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 476
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 477 NVAVDQLCERI 487
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 168/321 (52%), Gaps = 30/321 (9%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ T+ R P+ P F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSN 704
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 705 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPRD---IGIITPYEGQRSYIVSSMQ 761
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRAR
Sbjct: 762 ATGT-FKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRAR 820
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELL- 661
L ILGN + L+ K +W L+ R C V+ L L E L
Sbjct: 821 FGLVILGNPKVLS-KHPLWNCLLQHFKERHCL---------------VEGPLSNLQESLI 864
Query: 662 ---NPESRLFRSQRWKVNFSE 679
P+ QR++++FS+
Sbjct: 865 QFSRPKQAYRGPQRFQMSFSQ 885
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 424 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 476
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 477 NVAVDQLCERI 487
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 168/312 (53%), Gaps = 23/312 (7%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L ++ EK+LL+ D++ + C+ L A + ++IDE+ Q E E
Sbjct: 616 LKTSAEKELLQHADVICTTCIGAGDPRLRVAKLRFRC----------VLIDESTQATEPE 665
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ + G K VL GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 666 CMVPI-VHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQSLFERLVVLGIRPIRLQVQYRM 724
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HPS+S FP++ FY+ +++ TV +RS P+ F G+EE S
Sbjct: 725 HPSLSEFPSNLFYDGTLQNGVTVAERSQPGVDFPWPVGDKPMFFYATTGQEEISSSGTSY 784
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFA 555
N E + V KI +A + ++ +GI++PY Q +VA + GS + +S
Sbjct: 785 LNRTEAATVEKIATRFLRAGVKPEQ---MGIITPYEGQRAYIVAYMQFSGSLH-SSLYQN 840
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
++V S+D FQG E+D II+S RSN IGFL + +R+NVALTR+++ L I+GN + L+
Sbjct: 841 IEVASVDAFQGREKDYIIMSCARSNEHQGIGFLKDPRRLNVALTRSKYGLIIIGNPKVLS 900
Query: 616 RKKSVWEALVHD 627
K+ +W L++D
Sbjct: 901 -KQPLWNHLLND 911
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 16/114 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L + + LVC P+
Sbjct: 489 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLAKQGLGQILVCAPS 541
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE 136
N+A+ +L ++ +K+V+ + + R+A+ P+G + L +N+ +DS E
Sbjct: 542 NIAVDQLTEKIHKTGLKVVRLAAK--SREAIDSPVGFLAL--HNQVRNMDSMPE 591
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E +L ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1545 AREMELRRRQIQQEILNSAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1603
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1604 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHP 1662
Query: 443 SISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE+++ D +R+ + K L + PY F +V G +E + S
Sbjct: 1663 EISHFPSREFYESQLHDGQDMLQLRQAPWHKDTL----FAPYRFFDVEGVQERGRKGQSL 1718
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V +++ + + D IGI++PY AQ+ ++ + ++Y + ++
Sbjct: 1719 VNTRELEVALQLYERFSREYRDIDLTRKIGIITPYKAQLYELRSRFQARYGENITDIIEF 1778
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1779 NTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1838
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ DA R + D
Sbjct: 1839 -FWRKLIVDAQERDRYTKGD 1857
>gi|408388581|gb|EKJ68262.1| hypothetical protein FPSE_11565 [Fusarium pseudograminearum CS3096]
Length = 2079
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 164/302 (54%), Gaps = 8/302 (2%)
Query: 341 LKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L A + +T S S M ++ +E ++IDEAAQ E + IPL+ G VL GD
Sbjct: 1563 LNNAQVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALIPLKY-GCYRCVLVGD 1620
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S+ + + + +SLF R+ HLL +QYRMHP IS FP+ FYE ++
Sbjct: 1621 PKQLPPTVLSQSAAKFGYDQSLFVRMQQNHPDWVHLLDMQYRMHPEISMFPSREFYEGQL 1680
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYK 516
D + + ++ + + GPY F +V G + + S N E+ V M++
Sbjct: 1681 ADGQNMHELR-QQPWHQSALLGPYRFFDVQGVQARGHKGQSLVNTRELDVAMQMYDRFSN 1739
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ + IGI++PY AQ+ ++ + S+Y ++ + D FQG E ++II S
Sbjct: 1740 EYGECDLTGKIGIITPYKAQLFELRNRFRSRYGEGITNIIEFNTTDAFQGRECEIIIFSC 1799
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VR+++ G IGF+++ +R+NV LTRA+ LWILG++R L + + W+ L+ DA +R +
Sbjct: 1800 VRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE-FWKKLIEDAQSRDRYTK 1858
Query: 637 AD 638
D
Sbjct: 1859 GD 1860
>gi|340504056|gb|EGR30545.1| hypothetical protein IMG5_129630 [Ichthyophthirius multifiliis]
Length = 801
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 183/321 (57%), Gaps = 16/321 (4%)
Query: 313 KLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDE 372
+++ E+NL + +++ + +L+ + +L S+A S +++S + ++IDE
Sbjct: 456 QVKQKLGEMNLRAEEAENIRKKILQEAKIICGTL--SSAGSQLLINSNFY--FDTVIIDE 511
Query: 373 AAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH 432
AAQ E + IPLQ K +L GD QLPA + SK + + +SLFERL G + +
Sbjct: 512 AAQAAEISTLIPLQYH-CKRLILIGDPNQLPATIFSKKCEKFNYDQSLFERLMKCGLNVY 570
Query: 433 LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE 492
+L QYRM+P IS F ++ FYE KI D+ +++ F ++ P +NV G E
Sbjct: 571 MLKQQYRMNPIISKFISNTFYEGKIDDAQKIKEIVGNPEFYQFRIFSPIVVLNV-NGNEI 629
Query: 493 FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA 552
F + S +N E +++I L K + S + +GI++PYS+QV I+ K+ ++ +
Sbjct: 630 FHKSSYKNEEESEAIVEIYAQLKKRF-PSFDLTQLGIITPYSSQVSEIRRKI-KQFDGTD 687
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRS-------NNGGSIGFLSNSKRVNVALTRARHCL 605
V+V ++DGFQG E+D+II STVR+ NN +IGFL++ +R+NV+L+RAR L
Sbjct: 688 KCLVEVHTVDGFQGREKDIIIFSTVRASIQNGVKNNKKTIGFLNDKRRMNVSLSRARLSL 747
Query: 606 WILGNARTLTRKKSVWEALVH 626
++G+ + L K +W+ L
Sbjct: 748 IVVGDLKQLKYSK-LWKGLAE 767
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 153/278 (55%), Gaps = 5/278 (1%)
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
ML VA + +VIDEAAQ E S IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1708 MLAGVAFD-FETVVIDEAAQAVELSSMIPLRY-GCKQCIMVGDPNQLPPTVISQQAEKLG 1765
Query: 416 FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
+ +SLF R+ + HLLSIQYRMHP IS FP+ FY++K+ D + + + + +
Sbjct: 1766 YSQSLFVRMFEKAPQAVHLLSIQYRMHPEISVFPSKAFYDSKLLDGPDMAELTRQPWHKY 1825
Query: 475 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ P+ F++ HS N E +V + + L IGIV+ Y
Sbjct: 1826 -ELTRPFKFLSTKAPESPGRFHSIINREEANVALALYERLRTDHPRENFDYRIGIVTMYK 1884
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS-NNGGSIGFLSNSKR 593
AQV ++ +Y + ++DGFQG E+D+II+S VRS + SIGFLS+ +R
Sbjct: 1885 AQVFELRRTFQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRR 1944
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
+NVA+TRA+ L+++GNA L R ++WE+LV A R
Sbjct: 1945 LNVAVTRAKSNLFVIGNAEHLRRGDAIWESLVATAEQR 1982
Score = 46.6 bits (109), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 34/134 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+ QA+A+L L LI GPPGTGKTKT+ L+ +
Sbjct: 1470 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSNRKGPSTSVQAG 1523
Query: 75 --QMKF----RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
Q K + L+C P+N AI E+A R + R F P ++ +G ++
Sbjct: 1524 QAQGKVGATKKILLCAPSNAAIDEVAKRA-----RAGMRLADGKTFHP--KVVRVGRDDS 1576
Query: 129 LKVDSGVEEIYLDY 142
+ V V++I LDY
Sbjct: 1577 MNV--SVKDISLDY 1588
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T ++R + P+ P F
Sbjct: 628 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWAN 687
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE HS N VE V KI+ L+K I ++ IG+++PY Q + + +
Sbjct: 688 YG-REEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQ---IGVITPYEGQRAYLIQYM 743
Query: 545 GSKYVNSA-------GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
+NS V++ S+D FQG E+D II+S VR+N+ +IGFLS+S+R+NVA
Sbjct: 744 S---INSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVA 800
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
LTRA++ L ILGN R L R ++W L+ + C + D
Sbjct: 801 LTRAKYGLVILGNPRALCR-NTLWNHLLVHFREKGCLVDGTLD 842
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 406 TELNSSQTNAVKSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCA 458
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LA +VV+L +S E
Sbjct: 459 PSNVAVDHLANKLNLLGLKVVRLTAKSRE 487
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 21/348 (6%)
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLH 358
H RR + R Q+ EL + E++L + L A + +T S S M
Sbjct: 1436 HVRRRKAELGSRIDQTKDREL--AAGREQELNRKRAQQAVLDEAHVICATLSGSGHDMFQ 1493
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
S+ +E ++IDEAAQ E S IPL+ +K ++ GD QLP V SK + + +
Sbjct: 1494 SLNIE-FETVIIDEAAQCVEMSSLIPLKYGCVK-CIMVGDPKQLPPTVFSKEAARFQYEQ 1551
Query: 419 SLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS---TVRKRSYEKRFLH 474
SLF R+ + HLL QYRMHP IS FP++ FY++K++D S +RK+S+ L
Sbjct: 1552 SLFVRMQNNFPNEVHLLDTQYRMHPDISAFPSATFYDHKLKDGSNMAALRKKSWHASNL- 1610
Query: 475 GPMYGPYSFINVFGGREEFIEH-SCRNMVEVSVVMKILLNL---YKAWIDSKEKLSIGIV 530
PY F +V G + S N EV V M + L + + D + IGI+
Sbjct: 1611 ---LAPYRFYDVKGQHSAAPKGFSLVNHAEVEVAMALYSRLTTDFGSTYDFSNR--IGII 1665
Query: 531 SPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
+PY +Q+ +++K + + V+ + D FQG E ++II S VR+++ G +GFL +
Sbjct: 1666 TPYKSQLELLRKKFSTAFGLEILEKVEFNTTDAFQGREAEIIIFSCVRASDKGGVGFLQD 1725
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
+R+NV LTRA+ LW+LGN+ +L+R + W L+ D + D
Sbjct: 1726 IRRMNVGLTRAKCSLWVLGNSESLSRGQ-YWRLLIEDVERKGAMVKGD 1772
>gi|326930440|ref|XP_003211355.1| PREDICTED: probable helicase senataxin-like [Meleagris gallopavo]
Length = 2717
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 159/296 (53%), Gaps = 31/296 (10%)
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
++P + +++DEA Q E E+ IPL + VL GD QLP ++S + E +G+SL
Sbjct: 2202 GLDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSL 2260
Query: 421 FERLSYLGYSKHL----------------LSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
RL +HL L++QYRMHP I FP+SY Y ++
Sbjct: 2261 MARLQ-----RHLEDQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYVYGRTLK----TD 2311
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK 524
K + E R + PY +V GREE + S N EV +V++I+ + + D +
Sbjct: 2312 KATEENRCSSEWPFQPYLVFDVGDGREERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLR 2371
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-G 583
IGI++PYSAQ IQE+L + N++ +V ++D FQG E+D II++ VR+N+ G
Sbjct: 2372 -RIGIITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKG 2428
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
SIGFL++ +R+NV +TRAR L+ILG +TL K W L+ DA R D
Sbjct: 2429 SIGFLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNELIQDAQRRGAIIKTSD 2483
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT---------------LVCTPTNVAIKEL 93
A I LI GPPGTGK+KT+ LL +L RT LVC P+N A+ EL
Sbjct: 1989 AKICLIHGPPGTGKSKTIVGLLSRVLSENTRTEKTSKKNARMKQSRFLVCAPSNAAVDEL 2048
Query: 94 AARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD----YRVKR 146
+++ KE + + GDI L+ ++S V LD +R+KR
Sbjct: 2049 MKKIIIAFKEKCQN--KQEPLGNCGDIKLVRLGAERSINSEVRAFSLDKQVEHRMKR 2103
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 186/356 (52%), Gaps = 37/356 (10%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY 355
+++L RSE H L++L+ EL+ S+ EK K LKRA+ + S+
Sbjct: 577 VRHLDTSERSELH-KLQQLKDEQGELS--SSDEK-------KYKALKRATEREISQSADV 626
Query: 356 MLHSV--AMEPL--NF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
+ + A +P NF ++IDE+ Q E E IPL L G K AVL GD CQL ++
Sbjct: 627 ICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVL-GAKQAVLVGDHCQLGPVIM 685
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
K + A +SLFERL LG L +QYRMHPS+S FP++ FYE +++ T+ +R
Sbjct: 686 CKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 745
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
P+ F V G+EE S N E + V KI+ ++ + +
Sbjct: 746 STGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-- 803
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVR 578
IG+++PY Q I Y++ G ++V S+D FQG E+D II+S VR
Sbjct: 804 -IGVITPYEGQRAYI-----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 857
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
SN IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 858 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 912
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 475 FGAPGLPELNASQVFAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 527
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 528 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 571
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 572 TLHYQVRHL 580
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T ++R + P+ P F
Sbjct: 628 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWAN 687
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE HS N VE V KI+ L+K I ++ IG+++PY Q + + +
Sbjct: 688 YG-REEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQ---IGVITPYEGQRAYLIQYM 743
Query: 545 GSKYVNSA-------GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
+NS V++ S+D FQG E+D II+S VR+N+ +IGFLS+S+R+NVA
Sbjct: 744 S---INSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVA 800
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
LTRA++ L ILGN R L R ++W L+ + C + D
Sbjct: 801 LTRAKYGLVILGNPRALCR-NTLWNHLLVHFREKGCLVDGTLD 842
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 406 TELNSSQTNAVKSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCA 458
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LA +VV+L +S E
Sbjct: 459 PSNVAVDHLANKLNLLGLKVVRLTAKSRE 487
>gi|354545469|emb|CCE42197.1| hypothetical protein CPAR2_807460 [Candida parapsilosis]
Length = 1950
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 169/300 (56%), Gaps = 8/300 (2%)
Query: 336 LKSFCLKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
+++ L A++ +T S S ++ ++A+ + ++IDEA Q ES + IPL+ G +
Sbjct: 1480 IQARILSEANILCATLSGSAHDLVANLAVT-FDQVIIDEACQCSESAAIIPLRY-GCRRC 1537
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYF 452
++ GD QLP V S+ + + +SLF R+ S +LL+ QYRMHP IS FP++ F
Sbjct: 1538 IMVGDPNQLPPTVLSQTAASLNYDQSLFVRMQKNHPDSIYLLNTQYRMHPMISKFPSAEF 1597
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKIL 511
Y++K+ D +++++ P+ PY F ++ E+ + S N E +V ++++
Sbjct: 1598 YQSKLIDGPGMQEKNTRPWHSVDPL-SPYRFFDIVSRHEKNELTRSLYNTEEANVCLQLV 1656
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+ IGI+SPY Q+ I+ + + ++DGFQG E+++
Sbjct: 1657 QKMMTMVPQKDIAGKIGIISPYKEQIKTIKRVFERAFGRLIFNEIDFNTVDGFQGQEKEI 1716
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VR++ GSIGFLS+ +R+NVALTRA LWILGN +L R + VW+ L+ DA R
Sbjct: 1717 IIMSCVRASANGSIGFLSDIRRMNVALTRACTTLWILGNKNSLARDE-VWKRLIEDAEKR 1775
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 24/95 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------------ 75
+N SQA+A++ + LI GPPGTGKTKT+ ++ L
Sbjct: 1274 VNMSQAKAIIGSYQS------EGFSLIQGPPGTGKTKTILGIVGYSLSHGVNEKAIEAPS 1327
Query: 76 ------MKFRTLVCTPTNVAIKELAARVVKLVKES 104
+ + L+C P+N A+ EL R+ V+ S
Sbjct: 1328 KSASPSSRAKILICAPSNAAVDELVVRLRNGVRNS 1362
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 146/268 (54%), Gaps = 18/268 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE+ Q E E IPL + G K V+ GD CQL +V SK + A G+S+FERL L
Sbjct: 528 VLMDESTQATEPECLIPL-IMGAKQVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISL 586
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINV 486
G L +QYRMHP +S FP++ FYE +++ R P P F ++
Sbjct: 587 GVQPIRLQVQYRMHPCLSEFPSNAFYEGALQNGVAAADRLLTHVDFPWPNPTSPMMFWSM 646
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E + V K++ +L +A +D IG+V+PY Q +
Sbjct: 647 TGAEEISASGTSYLNRAEAAGVEKVVTHLLRAGVDPGR---IGVVTPYEGQRAYV----- 698
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
S+++ AG V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVA+
Sbjct: 699 SQHMTRAGVLATRLYGEVEVASVDAFQGREKDFIILSCVRSNEKTGIGFLNDPRRLNVAM 758
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVH 626
TRAR L ILGN + L+R++ + L H
Sbjct: 759 TRARSGLVILGNPKVLSRQRLFHDLLNH 786
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 24/121 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A + L++ + LI GPPGTGKT T + ++ L Q + +VC P+
Sbjct: 364 LNHSQESAARAVLQR-------PLSLIQGPPGTGKTVTSATIVYQLAQQHLGQVIVCAPS 416
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
NVA+ +LA E +ER ++ L R V S VE + L Y+V
Sbjct: 417 NVAVDQLA--------EKIERTGL--------RVVRLAARSREHVASPVEHLTLHYQVAH 460
Query: 147 L 147
L
Sbjct: 461 L 461
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 186/356 (52%), Gaps = 37/356 (10%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY 355
+++L RSE H L++L+ EL+ S+ EK K LKRA+ + S+
Sbjct: 577 VRHLDTSERSELH-KLQQLKDEQGELS--SSDEK-------KYKALKRATEREISQSADV 626
Query: 356 MLHSV--AMEPL--NF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
+ + A +P NF ++IDE+ Q E E IPL L G K AVL GD CQL ++
Sbjct: 627 ICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVL-GAKQAVLVGDHCQLGPVIM 685
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
K + A +SLFERL LG L +QYRMHPS+S FP++ FYE +++ T+ +R
Sbjct: 686 CKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQ 745
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
P+ F V G+EE S N E + V KI+ ++ + +
Sbjct: 746 STGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-- 803
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVR 578
IG+++PY Q I Y++ G ++V S+D FQG E+D II+S VR
Sbjct: 804 -IGVITPYEGQRAYI-----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVR 857
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
SN IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 858 SNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 912
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 475 FGAPGLPELNASQVFAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 527
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 528 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 571
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 572 TLHYQVRHL 580
>gi|299472182|emb|CBN79685.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Ectocarpus
siliculosus]
Length = 1201
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 176/365 (48%), Gaps = 62/365 (16%)
Query: 327 VEKDLLEDLLKSFCLKRASL--------FLSTASSSYMLHSVAMEPLNF--LVIDEAAQL 376
V K D L+S ++R + LS S M+ +V++ F +++DEA Q
Sbjct: 362 VAKQRRRDALRSLEVERGKIRRSLVVCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQA 421
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSI 436
E + IPL L G K +L GD QLPA V S+ + SLFERL GY H+L++
Sbjct: 422 TEPSTLIPLSL-GCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTV 480
Query: 437 QYRMHPSISCFPNSYFYENKIRDSSTVRKR--------SYEKRFLH--GPMYGPYSFINV 486
QYRMHP I FP++ FY ++ D+ VR + S E L GP + P+ ++V
Sbjct: 481 QYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPPLGPCFPPFLLVDV 540
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDS---------------------KEK- 524
G E S +N E S V L L + + S +EK
Sbjct: 541 SSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRGVKAGGGGGDGTAAGGGQDREKS 600
Query: 525 --LSIGIVSPYSAQVVAIQEKLG-----------SKYVNSAGFAVKVMSIDGFQGGEEDL 571
+ +G+++PY QV IQ++L V G +V ++DGFQG E D+
Sbjct: 601 GVVRVGVITPYRGQVHCIQQELSGGGGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDV 660
Query: 572 IIISTVRSNNG-----GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
++ S VR+ + G IGFL++ +R+NVALTRAR L +LGN L+ W+ALV
Sbjct: 661 VLFSCVRAPSSGGGGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLS-SDGTWKALVD 719
Query: 627 DANAR 631
+ +R
Sbjct: 720 HSKSR 724
>gi|363740551|ref|XP_415453.3| PREDICTED: probable helicase senataxin [Gallus gallus]
Length = 2713
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 31/296 (10%)
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
++P + +++DEA Q E E+ IPL + VL GD QLP ++S + E +G+SL
Sbjct: 2190 GLDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSL 2248
Query: 421 FERLSYLGYSKHL----------------LSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
RL +HL L++QYRMHP I FP+SY Y+ ++
Sbjct: 2249 MARLQ-----RHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLK----TD 2299
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK 524
K + E R + PY +V G EE + S N EV +V++I+ + + D +
Sbjct: 2300 KATEENRCSSEWPFQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLR 2359
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-G 583
IGI++PYSAQ IQE+L + N++ +V ++D FQG E+D II++ VR+N+ G
Sbjct: 2360 -RIGIITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKG 2416
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
SIGFL++ +R+NV +TRAR L+ILG +TL K W L+ DA R D
Sbjct: 2417 SIGFLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTSD 2471
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT---------------LVCTPTNVAIKEL 93
A I LI GPPGTGK+KT+ LL +L+ R LVC P+N AI EL
Sbjct: 1977 AKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDEL 2036
Query: 94 AARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD----YRVKR 146
+++ KE + R GDI L+ ++S V LD +R+KR
Sbjct: 2037 MKKIIIAFKEKCQN--RQEPLGNCGDIKLVRLGAERSINSEVRAFSLDKQVEHRMKR 2091
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS-STVRKRSYEKRFLHGPMYGPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ S++ + + F M P F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMDNPMMFWSN 699
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQD---IGIITPYEGQRSYIVSSMQ 756
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 757 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 816 YGLAILGNPKVLS-KHPLWNCLLQHFKERHCL 846
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 419 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 471
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E + L+
Sbjct: 472 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELMKLN 526
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 19/299 (6%)
Query: 341 LKRASLFLSTASSSYM-LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
LKR+++ +T SSS L VA + L+IDEA Q E+ + IPL+ + IK VL GD
Sbjct: 1277 LKRSNVVCATLSSSAKELIKVANIDFDILIIDEACQSVETSTLIPLKFNPIK-VVLVGDP 1335
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP + +S + +SLF RL Y LL++QYRMHP I FPN YFY ++
Sbjct: 1336 KQLPPTL---ISKHKPYEQSLFARLQK-TYPSVLLNVQYRMHPLIVEFPNQYFYRARLLT 1391
Query: 460 SSTVRKRS--YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
+++KR YE + P SFI + G + S N+ E + I+ L +
Sbjct: 1392 HKSIQKRQNPYEN------VIPPISFIQINGEEKTDNCFSFYNIEEAQYIGSIISELMEQ 1445
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ IGI++PY AQ+ I+E L S + F V V ++DGFQG E+D+I+ISTV
Sbjct: 1446 VKNYDFFNKIGIITPYKAQMKKIKEVLLSIRQDIFDF-VCVNTVDGFQGQEKDVILISTV 1504
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
+S N +GFLS+ +R+NV++TRA+H L I+GN++ L+ W+++++ + FN
Sbjct: 1505 KSKN---MGFLSDVRRINVSITRAKHSLIIIGNSKVLS-SSGAWKSMLNHYGKKNFVFN 1559
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 53 LIWGPPGTGKTKTVSML--------LVILLQMKF-------RTLVCTPTNVAIKELAARV 97
LI GPPGTGKTK + L +V +L+ K R L+C P+N A+ ELA R+
Sbjct: 1150 LIHGPPGTGKTKMIVSLIESLFNAQIVSVLKSKMFITNREPRVLICAPSNAAVDELARRI 1209
Query: 98 VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
L +RD + +G + NN +D ++ + LD +KR
Sbjct: 1210 NDL--HLKDRDVKRLQVLRIG----VQNN----IDDNLKMLTLDCIIKR 1248
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 156/280 (55%), Gaps = 13/280 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL +L
Sbjct: 598 VLVDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 656
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRMHP +S FP++ FYE ++D T R P+ P F
Sbjct: 657 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRVVADSSFPWPVIDTPMMFWAN 716
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE +S N VE V +I+ L+K I ++ IG+++PY Q + +
Sbjct: 717 YG-REELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFM 772
Query: 543 KLGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
+ S +N V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NVALTR
Sbjct: 773 SMNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGFLSDPRRLNVALTR 832
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
A++ L +LGN R L+R + +W L+ + C + D
Sbjct: 833 AKYGLLVLGNPRALSRNR-LWNHLLVHFREKGCLVDGPLD 871
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQA AV S L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 432 PKLTE-LNVSQANAVRSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRLNKEKI 483
Query: 81 LVCTPTNVAIKELAAR-------VVKLVKESVE 106
LVC P+NVA+ LAA+ VV+L +S E
Sbjct: 484 LVCAPSNVAVDHLAAKLDSLGLNVVRLTAKSRE 516
>gi|242095510|ref|XP_002438245.1| hypothetical protein SORBIDRAFT_10g010515 [Sorghum bicolor]
gi|241916468|gb|EER89612.1| hypothetical protein SORBIDRAFT_10g010515 [Sorghum bicolor]
Length = 534
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 135/249 (54%), Gaps = 53/249 (21%)
Query: 353 SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSN 412
+ +M + E + LVIDEAA LKE ES +PL ++GIKH VL GD+ QL ++V+S+++
Sbjct: 339 TPFMSARLNNEQYDILVIDEAAYLKECESMVPLSINGIKHLVLIGDDLQLQSVVKSQIAK 398
Query: 413 EACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
EA +GRSLFERL +G+ KHLL++QYRMHP IS P FY+ I D++ +++ K F
Sbjct: 399 EAKYGRSLFERLCEIGWHKHLLNVQYRMHPDISRLPMKVFYDETIIDAT---EKTSAKIF 455
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+ G ++G YSFINV E S +N+VE +V I+ L K
Sbjct: 456 I-GDIFGNYSFINVEYAIEHQTGQSVQNVVEAAVAATIVSKLSK---------------- 498
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSK 592
G E+D+II+STVR+N G IGFL +
Sbjct: 499 ---------------------------------GDEKDIIILSTVRNNKFGKIGFLDSCG 525
Query: 593 RVNVALTRA 601
R NVALTRA
Sbjct: 526 RANVALTRA 534
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 29/117 (24%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ+ AV SC+ ++ +++++LIWGPPGTGKTKTVS++L ++
Sbjct: 219 LNESQSDAVASCISAIKSG-ESSVRLIWGPPGTGKTKTVSVILSLV-------------- 263
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNE----RLKVDSGVEEIYL 140
+LA+R++ LV +S E LG+I+L G+++ K D + +I+L
Sbjct: 264 ----QLASRLISLVDKSTETK------HLLGNIILFGSDKLSSCWKKTDKTLSKIFL 310
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 183/351 (52%), Gaps = 22/351 (6%)
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN-LPSAVEKD--LLEDLLKSFCLKR 343
E L+ + + + + + H LRKLQ +E L A EK LL+ L+ L
Sbjct: 388 EALASPVSHLMLHVQAQHVKGHSELRKLQQLKDETGELSQADEKRYRLLKRELERELLVA 447
Query: 344 ASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
A + T ++ +E L+F ++IDE+ Q E E IPL + G + VL GD CQ
Sbjct: 448 ADVVCCTCVTA---GDQRLERLSFHSVLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQ 503
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
L ++ K + A +SLFER LG L +QYRMHP++S FP++ FYE +++
Sbjct: 504 LGPVITCKKAANAGLTQSLFERFVLLGIRPMRLQVQYRMHPALSAFPSNVFYEGSLQNGV 563
Query: 462 TVRKRSYEKRFLHGPMYGP--YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKA 517
T R + F P P F G+EE + S N E + V KI+ + K
Sbjct: 564 TAEDRCKQIDF---PWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKI 620
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLG-SKYVNSAGFA-VKVMSIDGFQGGEEDLIIIS 575
+ +IG+++PY Q + L S +NS + +++ S+D FQG E+D II+S
Sbjct: 621 GVHPN---TIGVITPYEGQRAYLAHYLHYSGSLNSKLYQEIEIASVDAFQGREKDYIILS 677
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
VR+N IGFL++ +R+NVALTRAR+ L ++GN + L K+ +W L+H
Sbjct: 678 CVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALC-KQPLWNQLLH 727
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + + LV P+
Sbjct: 309 LNHSQVFAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPS 361
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILL 122
N A+ +L ++ + V R C R+AL P+ ++L
Sbjct: 362 NTAVDQLCEKISR-TGLKVVRLCARSREALASPVSHLML 399
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 613 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 671
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 672 GLAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSN 731
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + IG+++PY Q VV+ +
Sbjct: 732 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---QPADIGVITPYEGQRSYVVSSMQ 788
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 789 NTGT-FKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 847
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 848 YGLVILGNPKVLS-KHPLWHYLLQHFKERNCL 878
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 451 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATVIYHLSKVNGGQVLVCAPS 503
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 504 NVAVDQLCERIHRTGLKVVRLTAKSRE 530
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 173/320 (54%), Gaps = 14/320 (4%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A E +L ++ L A + +T S S M ++ +E ++IDEAAQ E + I
Sbjct: 1528 AREMELRRRQIQQEILNSAHVLCATLSGSGHEMFRNLDVE-FETVIIDEAAQCVELSALI 1586
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHP 442
PL+ G +L GD QLP V S+ + + +SLF R+ S HLL +QYRMHP
Sbjct: 1587 PLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPKSIHLLDMQYRMHP 1645
Query: 443 SISCFPNSYFYENKIRDSS---TVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSC 498
IS FP+ FYE++++D +R+ + K L + PY F +V G +E+ + S
Sbjct: 1646 EISSFPSREFYESQLQDGQDMLQLRQAPWHKDTL----FAPYRFFDVEGVQEKGRKGQSL 1701
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E+ V +++ + + + IGI++PY AQ+ ++ + ++Y + ++
Sbjct: 1702 VNTRELEVALQMYERFSRDYHECDLTRKIGIITPYKAQLYELRSRFQARYGENITNIIEF 1761
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR++ G IGF+++ +R+NV LTRA+ LWILG++R L + +
Sbjct: 1762 NTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGE 1821
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ DA R + D
Sbjct: 1822 -FWRKLIVDAQDRDRYTKGD 1840
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL +L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVHL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T+++R P+ P F +
Sbjct: 673 GLNPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLRRDVDFPWPVADTPMMFWSN 732
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + IG+++PY Q VV +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPGD---IGVITPYEGQRSYVVTSMQ 789
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 790 NAGS-FKKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 848
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GN + L+ K +W L+ R C
Sbjct: 849 YGLVIVGNPKVLS-KHPLWHYLLQHFKDRSCL 879
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 452 LNSSQISAVKSVLQK-------PLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPS 504
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 505 NVAVDQLCERIHRTQLKVVRLTAKSRE 531
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 25/311 (8%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L E++LLE D+L C+ + L+ + +L IDE+ Q E E
Sbjct: 578 LKRQAERELLEAADVLACTCVGAGDVRLARIKFASIL------------IDESMQATEPE 625
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G + +L GD CQL +V K + +A +SLFERL LG L +QYRM
Sbjct: 626 CMVPVVL-GARQLILVGDHCQLGPVVMCKPAAKAGLSQSLFERLVVLGIRPFRLEVQYRM 684
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ R PM F V G+EE S
Sbjct: 685 HPRLSEFPSNFFYEGSLQNGVCAEDRILRGVDFPWPMPDRPMFFYVTLGQEEIAGSGTSY 744
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFA 555
N E S V KI ++ + ++ IGI++PY Q +V + GS +
Sbjct: 745 LNRTEASNVEKIATRFLRSGVKPEQ---IGIITPYEGQRAYLVQYMQHQGSLHAKLYQ-D 800
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
+++ S+D FQG E+DLII+S VRSN IGFL++ +R+NVA+TRAR+ + I+GN + L
Sbjct: 801 IEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDPRRLNVAMTRARYGIIIVGNPKVLA 860
Query: 616 RKKSVWEALVH 626
K+ VW L+H
Sbjct: 861 -KQPVWNHLLH 870
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L ++ LVC P+
Sbjct: 451 LNRSQVFAVKQAVQR-------PLTLIQGPPGTGKTVTSATIVYHLAKLGSGPVLVCAPS 503
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 504 NIAVDQLTEKI 514
>gi|444322031|ref|XP_004181671.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
gi|387514716|emb|CCH62152.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
Length = 2235
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 189/346 (54%), Gaps = 27/346 (7%)
Query: 311 LRKLQSSFNEL----------NLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--MLH 358
+R+L + NEL N + +DL ++ L + + ST S S +L
Sbjct: 1479 IRQLSKNINELGKQRDEIRERNSINYRNRDLDRRNTQASILAGSDIICSTLSGSAHDVLA 1538
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
S+ ++ + ++IDEA Q E S IPL+ G K ++ GD QLP V S +++ + +
Sbjct: 1539 SLGVQ-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASDFNYNQ 1596
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PM 477
SLF R+ +LL++QYRMHP IS FP+ FY+ +++D + K + R H
Sbjct: 1597 SLFVRMEK-NTKPYLLNVQYRMHPLISRFPSKEFYKRELKDGPDMEKIT--ARPWHSLEA 1653
Query: 478 YGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSP 532
GPY F ++ G++E S N EV V +++ LL ++ +D K IG++SP
Sbjct: 1654 LGPYKFFDIVSGKQEQNIKTMSYVNPEEVRVAIELIDYLLRHFEKKVDFTGK--IGVISP 1711
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS-IGFLSNS 591
Y Q++ ++ S + V +IDGFQG E+++I++S VR++ + +GFL +
Sbjct: 1712 YREQMMKMKRDFNSYFGGVISTYVDFNTIDGFQGQEKEIILLSCVRADASKTGVGFLKDF 1771
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+R+NVALTRA+ +WILG+ ++L + K +W+ L+ DA+ R +A
Sbjct: 1772 RRMNVALTRAKSSMWILGHHKSLYKNK-LWKHLIEDAHKRNALTSA 1816
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 183/355 (51%), Gaps = 35/355 (9%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNEL---------NLPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL NL A E+++ + D++ C+ A
Sbjct: 580 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAA 638
Query: 345 SLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
L LS ++ V +IDE+ Q E E IPL L G+K VL GD CQL
Sbjct: 639 DLRLS----NFRFRQV--------LIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGP 685
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
++ K + A +SLFERL LG L +QYRMHP++S FP++ FYE +++ T+
Sbjct: 686 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 745
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSK 522
+R P+ F V G+EE S N E + V K++ K+ +
Sbjct: 746 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPS 805
Query: 523 EKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IG+++PY Q +V + GS ++V S+D FQG E+D II+S VRS
Sbjct: 806 Q---IGVITPYEGQRAYIVNYMARNGS-LRQQLYKEIEVASVDSFQGREKDYIILSCVRS 861
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
N IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W L+ +C
Sbjct: 862 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECL 915
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 478 FGVPGLPELNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 530
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 531 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEYL 574
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 575 TLHYQVRHL 583
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 183/355 (51%), Gaps = 35/355 (9%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNEL---------NLPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL NL A E+++ + D++ C+ A
Sbjct: 583 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAA 641
Query: 345 SLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
L LS ++ V +IDE+ Q E E IPL L G+K VL GD CQL
Sbjct: 642 DLRLS----NFRFRQV--------LIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGP 688
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
++ K + A +SLFERL LG L +QYRMHP++S FP++ FYE +++ T+
Sbjct: 689 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 748
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSK 522
+R P+ F V G+EE S N E + V K++ K+ +
Sbjct: 749 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPS 808
Query: 523 EKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IG+++PY Q +V + GS ++V S+D FQG E+D II+S VRS
Sbjct: 809 Q---IGVITPYEGQRAYIVNYMARNGS-LRQQLYKEIEVASVDSFQGREKDYIILSCVRS 864
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
N IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W L+ +C
Sbjct: 865 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECL 918
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 481 FGVPGLPELNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 533
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 534 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEYL 577
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 578 TLHYQVRHL 586
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 417 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 475
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 476 GLAPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSN 535
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + ++ IG+++PY Q VV+ +
Sbjct: 536 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPQD---IGVITPYEGQRSFVVSSMQ 592
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 593 NTGT-FKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 651
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 652 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 682
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 255 LNSSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNGGQVLVCAPS 307
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 308 NVAVDQLCERIHRTGLKVVRLTAKSRE 334
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 150/276 (54%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 638 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 696
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP++ FYE +++ T+ +R P+ F V
Sbjct: 697 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQ 756
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 757 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 808
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 809 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 868
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 869 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 903
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 466 FGAPGLPELNASQVFAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 518
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 519 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 562
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 563 TLHYQVRHL 571
>gi|406861529|gb|EKD14583.1| hypothetical protein MBM_07304 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1997
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 10/300 (3%)
Query: 344 ASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
A + ST S S ML + +E ++IDEAAQ E + IPL+ G +L GD Q
Sbjct: 1526 AHVLCSTLSGSGHDMLRKLNVE-FETVIIDEAAQCIELSALIPLKY-GCSKCILVGDPEQ 1583
Query: 402 LPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRD 459
LP V S+ + + +SLF R+ + K HLL QYRMHP IS FP+ FY +++ D
Sbjct: 1584 LPPTVLSRSAQSFGYEQSLFVRMQK-NHPKDVHLLDTQYRMHPEISSFPSEQFYNSRLID 1642
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAW 518
+ K ++ + + GPY F +V G + + + HS N+ E++ +++ L +
Sbjct: 1643 GPDMAKLR-QQPWHASTILGPYRFFDVAGTQTKQVHGHSFINIPELNAALQLYSRLKTDY 1701
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ K IGI++ Y AQ+ ++ + Y ++ + D FQG E ++II S VR
Sbjct: 1702 TNVDFKGKIGIITTYKAQLNEMKLRFAHTYGEEIFQEIEFNTTDAFQGREREIIIFSCVR 1761
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
+ G IGFL + +R+NV LTRA+ LW+LG++R+L ++ W L+ DA +R + D
Sbjct: 1762 AKATGGIGFLGDIRRMNVGLTRAKSSLWVLGDSRSL-KQGQFWNRLIEDAKSRDRYTTGD 1820
Score = 40.8 bits (94), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 54/155 (34%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL----------------- 70
LN QA+A+LS + LI GPPG+GKTKT+ ++
Sbjct: 1297 LNTGQAKAILSA------NDNDGFTLIQGPPGSGKTKTIVAMVGSLLTQTLQQQAQEQAQ 1350
Query: 71 ----------VILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG-- 118
K + L+C P+N A+ EL R +KE + PL
Sbjct: 1351 QKPAAPGQKAASTAAPKKKLLICAPSNAAVDELVVR----LKEGI---------LPLSGS 1397
Query: 119 ----DILLLGNNERLKVDSGVEEIYLDYRVKRLAD 149
+++ LG ++ +++ V+++ LD V++ D
Sbjct: 1398 RQKINVIRLGRSD--AINTAVKDVMLDELVQKKLD 1430
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L +QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 721 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGD---IGIITPYEGQRSYVVSSMQ 777
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 778 ATGS-FKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 836
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 837 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 867
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + + LVC P+
Sbjct: 440 LNASQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPS 492
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 493 NVAVDQLCERI 503
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS Y V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 815 FSGSLYTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 873
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 874 YGVIIVGNPKALS-KQPLWNHLL 895
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 477 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 529
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 530 NIAVDQLTEKI 540
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 183/355 (51%), Gaps = 35/355 (9%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNEL---------NLPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL NL A E+++ + D++ C+ A
Sbjct: 572 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAA 630
Query: 345 SLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
L LS ++ V +IDE+ Q E E IPL L G+K VL GD CQL
Sbjct: 631 DLRLS----NFRFRQV--------LIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGP 677
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
++ K + A +SLFERL LG L +QYRMHP++S FP++ FYE +++ T+
Sbjct: 678 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 737
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSK 522
+R P+ F V G+EE S N E + V K++ K+ +
Sbjct: 738 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPS 797
Query: 523 EKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IG+++PY Q +V + GS ++V S+D FQG E+D II+S VRS
Sbjct: 798 Q---IGVITPYEGQRAYIVNYMARNGS-LRQQLYKEIEVASVDSFQGREKDYIILSCVRS 853
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
N IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W L+ +C
Sbjct: 854 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECL 907
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 470 FGVPGLPELNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 522
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 523 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEYL 566
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 567 TLHYQVRHL 575
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 178/340 (52%), Gaps = 34/340 (10%)
Query: 311 LRKLQSSFNELN---------LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHS 359
L +L+S EL+ L A E+D+L D++ C+ LS
Sbjct: 555 LAQLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRLSK--------- 605
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
M+ N L IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +S
Sbjct: 606 --MKFRNVL-IDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL L L+IQYRMHP +S FP++ FY+ +++ TVR+R P+
Sbjct: 662 LFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVRRDVDFPWPVVD 721
Query: 480 -PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
P F + G E S N E S V K++ +KA + + L IG+++PY Q
Sbjct: 722 MPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGV---KPLDIGVITPYEGQR 778
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V+ + G+ + + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+
Sbjct: 779 SYIVSTMQNTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRL 837
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
NVALTRA++ L I+GN + L+ K +W L+ R+C
Sbjct: 838 NVALTRAKYGLVIIGNPKVLS-KHELWHHLLVHFKDRKCL 876
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 449 LNTSQIAAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPS 501
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 502 NVAVDQLCERIHRTGLKVVRLTAKSRE 528
>gi|328871485|gb|EGG19855.1| hypothetical protein DFA_06958 [Dictyostelium fasciculatum]
Length = 1406
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 160/277 (57%), Gaps = 19/277 (6%)
Query: 337 KSFCLKRASLFLSTAS--SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
K ++ A + L+T S +S +L + + ++IDE+ Q E + IPL L+ +
Sbjct: 638 KKRMIREARILLTTLSGAASKILDASP----SVIIIDESTQSCEPSTLIPLLLNPNSKVI 693
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLS-YLGYSKHLLSIQYRMHPSISCFPNSYFY 453
L GD QLP V SK+S+ + SLFERLS YL H+L QYRMHPSIS FP+ FY
Sbjct: 694 LIGDPKQLPPTVFSKISSRHGYNVSLFERLSNYLPV--HMLDTQYRMHPSISKFPSQRFY 751
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILL 512
++K++D V K Y F + YGP +F N+ +E +S +N++E V +L
Sbjct: 752 QSKLKDGENVVK--YTNSFYNNAKYGPINFYNIPESQEVSENGNSLKNILESKYVFVLLK 809
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLI 572
L + + + K K+ +GI++PY Q +E L ++ + V V ++DGFQG E+D+I
Sbjct: 810 KLVQEYPEVK-KMIVGIITPYKLQK---KELLEARGAFNEKMDVVVNTVDGFQGAEKDII 865
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
I S VR+ IGFLS+ +R+NV +TRAR ++++G
Sbjct: 866 IFSCVRNKR---IGFLSDIRRINVGITRARKAIYVVG 899
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI---LLQMKFRTLVCT 84
LN SQ A+ + Q + LI GPPGTGKT + LL I +L K LVC
Sbjct: 531 LNPSQLSAIQKSMIQ------DELTLIQGPPGTGKTTIILNLLRIFHSILGEKETILVCA 584
Query: 85 PTNVAIKEL 93
P+N A+ E+
Sbjct: 585 PSNTAVDEV 593
>gi|281208036|gb|EFA82214.1| DNA2/NAM7 helicase family protein [Polysphondylium pallidum PN500]
Length = 864
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 163/300 (54%), Gaps = 25/300 (8%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+++ L+ A + +T S S + M + ++IDEAAQ E+ + +P+Q K VL
Sbjct: 487 IRTLVLEDAEIIATTLSFSGSSILMKMNGFDIVIIDEAAQAVETSTLVPMQ-HKCKKIVL 545
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA + S ++ + + +SLF+RL + H+L+ QYRMH SI FP+ +FY +
Sbjct: 546 VGDPKQLPATIISPIAIKQKYDQSLFQRLQE-KRTPHMLTTQYRMHSSIRAFPSKHFYND 604
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF-------GGREEFIEHSCRNMVEVSVVM 508
+ D + R+ + P +GP F ++ GG F E CR + +
Sbjct: 605 LLEDGPNIPSRA--TNYHANPFFGPLIFYDLSFSVETKPGGGSVFNEDECR------MAL 656
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGE 568
++ L K + D IGI+SPY QV++++E + N +G ++ ++DGFQG E
Sbjct: 657 QLYQLLLKTYPDELFSGRIGIISPYRQQVLSLREY----FKNYSGISID--TVDGFQGRE 710
Query: 569 EDLIIISTVRS--NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
++II S VR+ G IGFL++ +R+NVALTR R L I+GN+++L +E + H
Sbjct: 711 REIIIFSCVRAPAEKGAGIGFLADVRRMNVALTRPRSSLLIIGNSKSLCINPDWYELIKH 770
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 165/316 (52%), Gaps = 13/316 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G +L GD QL ++ S+ + +A +SLFERL YL
Sbjct: 528 VLIDESTQASEPECLIPI-VKGANQVILVGDHQQLGPVILSRKAGDAGLRQSLFERLIYL 586
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRMHP +S F ++ FY+ +++ T RS P+ P F V
Sbjct: 587 GHMPIRLEVQYRMHPCLSEFSSNVFYDGSLQNGVTAESRSRPDSTFPWPIREIPMMFWAV 646
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
FG REE S N E KI+ L K +D + IG+++PY+ Q +V
Sbjct: 647 FG-REELSASGTSYLNRTEAMNCEKIITRLLKEGVDPGK---IGVITPYAGQATFIVQYM 702
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
E G S V+V S+D FQG E+D II+S VR+N+ IGFLS+ +R+NVALTRA
Sbjct: 703 EMNGLIADKSRYSEVEVASVDSFQGREKDYIILSCVRANDNQLIGFLSDPRRLNVALTRA 762
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD-DDKDLGKAILAVKKELDELDEL 660
R + ILGN +TL+ K +W L+ + C + ++ L L+ + +
Sbjct: 763 RFGMAILGNPKTLS-KNPMWNRLLMHFREKGCLVDGSLENLKLCNIPLSRGGQATNGEFG 821
Query: 661 LNPESRLFRSQRWKVN 676
L P + RSQ + N
Sbjct: 822 LAPSTATGRSQSYDTN 837
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ A+ + L + + LI GPPGTGKT T + ++ L ++ K + LVC
Sbjct: 365 AKLNASQENAIHNVLSK-------PLSLIQGPPGTGKTVTSATIVYQLTKLHKGQILVCA 417
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+N+A+ LA+ RV++L+ +S E
Sbjct: 418 PSNIAVDHLASKLEQLGLRVLRLIAKSRE 446
>gi|449434252|ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like [Cucumis sativus]
Length = 841
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 148/284 (52%), Gaps = 17/284 (5%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ ++IDEAAQ E + +PL +G K L GD QLPA V S + + + +SLF+R
Sbjct: 489 FDVVIIDEAAQAVELATLVPLA-NGCKQVFLVGDPEQLPATVISTTAKKFGYDKSLFKRF 547
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSF 483
GY +L IQYRMHP I FP+ FY + D+ V+ R+ R H YGP+ F
Sbjct: 548 QTAGYPVTMLKIQYRMHPEIRSFPSREFYAESLEDAQDVKLRT--TRAWHAYRCYGPFCF 605
Query: 484 INVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
++ G+E S N+ E V+ + L ++ + K + I+SPYS QV +Q
Sbjct: 606 FDLHEGKESQPPGSGSWVNIDEADFVLHLYHKLVISYPELKSNSQVAIISPYSQQVKLLQ 665
Query: 542 EKLGSKYVNSAGFAVKVMSIDG----------FQGGEEDLIIISTVRSNNGGSIGFLSNS 591
EK + ++++ + QG E+D+ I S VR++ SIGFLS+
Sbjct: 666 EKFVDLFGMDPSDPLRMLKLGILEMNALCLILLQGREKDIAIFSCVRASENRSIGFLSDC 725
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
+R+NV +TRAR + ++G+A TL R + W LV A R C F
Sbjct: 726 RRMNVGITRARASILVVGSASTLKRDEH-WNNLVESAQKRDCLF 768
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 150/273 (54%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 609 VLIDESTQSAEPECIIPLML-GCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQL 667
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
LL+ QYRMHP +S FP++ FY+ +++ T +R + P+ P F +
Sbjct: 668 RLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSN 727
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ----VVAIQ 541
G E S N E S V KI+ +KA + E IG+++PY Q V +Q
Sbjct: 728 IGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGVKPAE---IGVITPYEGQRSYIVTTMQ 784
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
SK G V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA
Sbjct: 785 NSGTSKKDLYKG--VEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRA 842
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
++ L ILGN R L+ K +W L+ R+CF
Sbjct: 843 KYGLVILGNPRVLS-KHELWYNLLTHFRDRRCF 874
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 447 LNQSQVDAIRSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKMSGNQVLVCAPS 499
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 500 NVAVDQLCERIHRTGLKVVRLTAKSRE 526
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 603 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 661
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L +QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 662 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVADSPMMFWSN 721
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 722 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGD---IGIITPYEGQRSYVVSSMQ 778
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 779 ATGS-FKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 837
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 838 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 868
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 441 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLCKISASQVLVCAPS 493
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 494 NVAVDQLCERI 504
>gi|357163477|ref|XP_003579744.1| PREDICTED: probable helicase DDB_G0274399-like isoform 4
[Brachypodium distachyon]
Length = 762
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ
Sbjct: 410 DRIRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQA---------------- 453
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 454 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 510
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + K KR H +GP+ F ++ G + S N EV + I
Sbjct: 511 YEGILQDGEGLNK----KRPWHSYSCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLI 566
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K + ++SPYS QV ++++ S + + + + V ++DGFQG E++
Sbjct: 567 YHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKE 626
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N +IGF+S+ +R+NVA+TRAR + ++G+A TL + K W LV A
Sbjct: 627 VVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLVIGSASTLKQDKH-WNNLVESAKE 685
Query: 631 RQCFFN 636
R FF
Sbjct: 686 RDRFFT 691
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 155/275 (56%), Gaps = 11/275 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 673 GLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSN 732
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K++ +KA + + IG+V+PY Q +V+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGD---IGVVTPYEGQRSYIVSTMQ 789
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 790 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAK 848
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+ + I+GN + L+ K +W L+ R+C +
Sbjct: 849 YGVVIIGNPKVLS-KHELWHHLLIHFRDRKCLVDG 882
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 452 LNGSQISAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPS 504
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 505 NVAVDQLCERV 515
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ K + +A +SLFERL L
Sbjct: 596 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAGDAGLRQSLFERLVIL 654
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T +R E P+Y P F
Sbjct: 655 GHVPIRLEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIESSTFPWPVYDSPMMFWAN 714
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE +S N VE V KI+ L+K + +++ IG+++PY Q + +
Sbjct: 715 YG-REEISGSGNSYLNRVEAMNVEKIITRLFKDGVKAEQ---IGVITPYEGQRAYLVSYM 770
Query: 545 GSKYVNS--AGFA-----VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
+NS A F V+V S+D FQG E+D II+S VR+N+ IGFLS+ +R+NVA
Sbjct: 771 S---INSTLAEFKEQYLEVEVTSVDAFQGREKDYIILSCVRANSSHQIGFLSDPRRLNVA 827
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
LTRA++ L +LGN R L R + +W L+ + C + D
Sbjct: 828 LTRAKYGLVVLGNPRALCRNR-LWNQLLIHFREKGCLVDGPLD 869
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P+L+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 430 PNLTE-LNVSQINAVRSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLTKLNKEKI 481
Query: 81 LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYL 140
LVC P+NVA+ LA ++ D+L +L L R V+S V + L
Sbjct: 482 LVCAPSNVAVDHLAEKL-------------DSLGL---KVLRLTARSREDVESSVSHLSL 525
Query: 141 DYRVKRLA 148
V R A
Sbjct: 526 HNLVNRTA 533
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 11/276 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL +L
Sbjct: 592 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 650
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHP +S FP++ FYE +++ T R E P+
Sbjct: 651 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEDSTFPWPVIDTPMMFWAN 710
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE--K 543
GREE +S N VE V KI+ L+K I ++ IG+++PY Q + +
Sbjct: 711 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIQPEQ---IGVITPYEGQRAYLVQFMS 767
Query: 544 LGSKYVNSAG--FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ S ++ V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NVALTR+
Sbjct: 768 MNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSCVRANDSQSIGFLSDPRRLNVALTRS 827
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
++ L ILGN R L R + +W L+ + C +
Sbjct: 828 KYGLIILGNPRALCRNR-LWNHLLIHFREKGCLVDG 862
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + +
Sbjct: 426 PKLTE-LNISQTNAVRSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLNREKI 477
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ LAA +VV+L S E
Sbjct: 478 LVCAPSNVAVDHLAAKLDLLGLKVVRLTARSRE 510
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL + G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 599 VLIDESTQSSEPECMIPLVM-GCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 657
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T R + P+ P F +
Sbjct: 658 GCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSN 717
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + +IGI++PY Q V +
Sbjct: 718 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---AIGIITPYEGQRSYVVSSMQ 774
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L Y A ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 775 LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 834
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ C
Sbjct: 835 GLVILGNPKVLS-KHPLWNYLLRHFKEGNCL 864
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 437 LNPSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATVIYHLAKISGGQVLVCAPS 489
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 490 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 523
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 170/330 (51%), Gaps = 28/330 (8%)
Query: 310 VLRK---LQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEP 364
VLRK L+ ELN + +L+ L+ LK A + +T + L +
Sbjct: 653 VLRKFKALREETGELNPEDERKFLVLKGSLERNILKEADVICTTCVGAGDPRLRDIKFP- 711
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+++IDEA Q E E IPL L G + VL GD CQL ++ K EA SLFERL
Sbjct: 712 --YVLIDEATQASEPECLIPLVL-GARQVVLVGDHCQLGPVLLCKKVQEAGLSLSLFERL 768
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+LG+ L+ QYRMHP++S FP++ FYE ++ + + R R F+ P F
Sbjct: 769 IHLGHHPFRLTTQYRMHPALSEFPSNTFYEGQLVNEISYRDRVTNNGFVWPHPNRPMFFH 828
Query: 485 NVFGGRE------EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-- 536
N G E FI N E ++ KI+ + + IGI++PY Q
Sbjct: 829 NSTGHEEISSSGTSFI-----NRTEATLCEKIVTRFLELGTKPSQ---IGIITPYEGQRS 880
Query: 537 -VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
+V ++ G + + ++V S+D FQG E+D II+S VRSN IGFL + +R+N
Sbjct: 881 FLVNNMQRTG-RLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNENQGIGFLQDPRRLN 939
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALV 625
VALTRAR+ L ILGNAR L+R +W L+
Sbjct: 940 VALTRARYGLIILGNARVLSRDL-LWNNLI 968
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL----LQMKFRTLVC 83
LN SQ A S L K+ + LI GPPGTGKT + L+ L ++ K + LVC
Sbjct: 546 LNASQISAACSVL-------KSPLSLIQGPPGTGKTLVSAFLVHHLVNHGIKGKEKLLVC 598
Query: 84 TPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYR 143
P+NVAI +LA + + V V R C R +V S VE + L ++
Sbjct: 599 APSNVAIDQLAGK-LHSVGLKVVRLCSKL---------------REEVSSPVENLTLHHQ 642
Query: 144 VKRL 147
V +L
Sbjct: 643 VAQL 646
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L +QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 721 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGD---IGIITPYEGQRSYVVSSMQ 777
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 778 ATGS-FKKENYKEVEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRAK 836
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 837 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 867
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + + LVC P+
Sbjct: 440 LNASQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPS 492
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 493 NVAVDQLCERI 503
>gi|388579514|gb|EIM19837.1| hypothetical protein WALSEDRAFT_40862 [Wallemia sebi CBS 633.66]
Length = 1987
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 160/290 (55%), Gaps = 30/290 (10%)
Query: 364 PLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
P+ F ++IDEAAQ E + IP + G K +L GD+ QLP V S +++ + RSLF
Sbjct: 1525 PVEFETVIIDEAAQAVEVSALIPFKY-GCKRPILIGDQHQLPPTVMSTEASKKGYSRSLF 1583
Query: 422 ERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
RL + HLL+ QYRMHP IS P++ FY ++D + +++ + + ++G
Sbjct: 1584 VRLMESNQGRVHLLNEQYRMHPDISKLPSAVFYNGHLKDGPMMAEKT-KAPWHSNDLFGT 1642
Query: 481 YSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAW-----IDSKEKLSIGIVSPYSA 535
Y F + F G E ++HS +N E SVV+ + L K + +D + + I++ Y
Sbjct: 1643 YKFFD-FAGGERRVDHSYQNPDEASVVISLYERLRKQYGGEFSLDYR----VAIIATYKQ 1697
Query: 536 QVVAIQEKLGSKYVNSAG---FAVKVMSIDGFQGGEEDLIIISTVRSN-----------N 581
QV I+ +L ++ N V V ++DGFQG E+ +II+STVRS
Sbjct: 1698 QVRYIRNELKKRFWNVDKDILSKVDVNTVDGFQGQEKTIIILSTVRSTKFEDDGIYKERG 1757
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GG IGFL + +R+NVALTRA+ L+I+G+A L + W+ +V DA R
Sbjct: 1758 GGPIGFLKDIRRMNVALTRAQSSLFIVGHADKL-KYDQTWQHIVDDAEQR 1806
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLV----- 82
LN+SQA AVLS L LI GPPGTGK+KT+ L+ L M+ + LV
Sbjct: 1281 LNESQALAVLSSLI---GPADGAFSLIQGPPGTGKSKTILALVAKFLSMRAKPLVGRTNP 1337
Query: 83 -------------CTPTNVAIKELAARV 97
C P+N AI E+ R+
Sbjct: 1338 NAAENYVPPKILICAPSNAAIDEVVNRL 1365
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 182/363 (50%), Gaps = 51/363 (14%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELN---------LPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL+ L A E+++L+ D++ C+
Sbjct: 601 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAG 659
Query: 345 SLFLSTASSSYMLHSVAMEPLNF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
LS NF ++IDE+ Q E E IPL L G+K VL GD C
Sbjct: 660 DPRLS----------------NFRFRQVLIDESTQATEPECLIPLVL-GVKQVVLVGDHC 702
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QL ++ K + A +SLFERL LG L +QYRMHP +S FP++ FYE +++
Sbjct: 703 QLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNG 762
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAW 518
TV +R P+ F V G+EE S N E + V KI+ ++
Sbjct: 763 VTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG 822
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF-------AVKVMSIDGFQGGEEDL 571
+ + IG+++PY Q I Y++ G ++V S+D FQG E+D
Sbjct: 823 VVPSQ---IGVITPYEGQRAYI-----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDY 874
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VRSN IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W +L+
Sbjct: 875 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNSLLTHYKEH 933
Query: 632 QCF 634
+C
Sbjct: 934 ECL 936
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T + ++ + Q +
Sbjct: 499 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSAAIVYHMAKQGQG 551
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 552 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 595
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 596 TLHYQVRHL 604
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL + G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 611 VLIDESTQSSEPECMIPLVM-GCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T R + P+ P F +
Sbjct: 670 GCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSN 729
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + +IGI++PY Q V +
Sbjct: 730 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---AIGIITPYEGQRSYVVSSMQ 786
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L Y A ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 787 LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 846
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ C
Sbjct: 847 GLVILGNPKVLS-KHPLWNYLLRHFKEGNCL 876
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 449 LNPSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATVIYHLAKISGGQVLVCAPS 501
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 502 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 535
>gi|357163468|ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-like isoform 1
[Brachypodium distachyon]
Length = 802
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +++ L A++ ST S S + S + ++IDEAAQ
Sbjct: 450 DRIRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQA---------------- 493
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 494 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 550
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFG-GREEFIEHSCRNMVEVSVVMKI 510
YE ++D + K KR H +GP+ F ++ G + S N EV + I
Sbjct: 551 YEGILQDGEGLNK----KRPWHSYSCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLI 606
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + + K + ++SPYS QV ++++ S + + + + V ++DGFQG E++
Sbjct: 607 YHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKE 666
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N +IGF+S+ +R+NVA+TRAR + ++G+A TL + K W LV A
Sbjct: 667 VVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLVIGSASTLKQDKH-WNNLVESAKE 725
Query: 631 RQCFFN 636
R FF
Sbjct: 726 RDRFFT 731
>gi|449478203|ref|XP_002195542.2| PREDICTED: probable helicase senataxin [Taeniopygia guttata]
Length = 2162
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 166/304 (54%), Gaps = 34/304 (11%)
Query: 348 LSTASSSYMLHSVA---MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
LST+ S + + + ++P + +++DEA Q E E+ IPL + VL GD QLP
Sbjct: 1818 LSTSGGSLLESAFSRQGLDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPKQLPP 1876
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHL----------------LSIQYRMHPSISCFP 448
V+S + + + +SL RL +HL L++QYRMHP I FP
Sbjct: 1877 TVKSIKAQQYGYDQSLMARLQ-----RHLEEQVQQNILHSLPVVQLTVQYRMHPDICLFP 1931
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVM 508
++Y Y ++ + + E R + PY +V GREE S N EV +VM
Sbjct: 1932 SNYVYGRTLKTAKAIE----ENRCSSEWPFQPYLIFDVADGREERDNDSYSNPREVKLVM 1987
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGE 568
+++ + + D + IGI++PYSAQ IQE+L S + N++ +V ++D FQG E
Sbjct: 1988 ELIRTIKEKRKDLGLR-RIGIITPYSAQKRKIQEQLDSVFKNNS--PGEVDTVDAFQGRE 2044
Query: 569 EDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHD 627
+D II+S VR+N+ GSIGFLS+ +R+NV +TRAR L+ILG +TL K+ W L+ D
Sbjct: 2045 KDCIIVSCVRANSTKGSIGFLSSLQRLNVTITRARFSLFILGRLQTLMEDKN-WNHLIQD 2103
Query: 628 ANAR 631
A R
Sbjct: 2104 AQKR 2107
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKFRT----------------LVCTPTNVAIKELA 94
I LI GPPGTGK+KT+ LL +L+ R+ LVC P+N A+ EL
Sbjct: 1620 ICLIHGPPGTGKSKTIVGLLSRVLRENTRSEKTAREKNSKIKPNRFLVCAPSNAAVDELM 1679
Query: 95 ARVVKLVKESVER------DCRDALFFPLGDILLLGNNER-LKVDSGVEEIYLDYRVKR- 146
+++ KE + +C D LG + N R +D VE +R+KR
Sbjct: 1680 KKIIIAFKEKCQNKQEPLGNCGDIKLVRLGAEKSINNEVRGFSLDKQVE-----HRMKRK 1734
Query: 147 LADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEKE 199
DC + +D L +++ + + D G + KE++
Sbjct: 1735 PGDCDQDIQKKKEALDQKLDMLSRERAMHRCEKREVASQMLNDEIGRLAKERQ 1787
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 148/264 (56%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IP+ + G KH V+ GD CQL +V +K + A +SLF+RL L
Sbjct: 613 VLIDEATQATEPECLIPI-VQGAKHVVMVGDHCQLGPVVMNKRAASAGLNQSLFDRLLKL 671
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
+ L +QYRMHP +S FP++ FYE ++++ + +R + P +F +
Sbjct: 672 DHRPFRLRVQYRMHPCLSEFPSNTFYEGELQNGVSSTERQLKNVDFPWPNPNKPTFFYIC 731
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G EE S N E S V KI+ K + + IG+++PY Q VV +
Sbjct: 732 LGAEEISSSGTSYLNRTEASNVEKIVTAFLKCGVLPAQ---IGVITPYEGQRAYVVNYMQ 788
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ GS V+V S+D FQG E+DLII+S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 789 RNGSMRAQLYK-DVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDRRRLNVALTRAK 847
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + ILGN R L K+ +W L++
Sbjct: 848 YGVIILGNPRVLA-KQELWNRLLN 870
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCTPT 86
LN Q +AV L Q + LI GPPGTGKT T S++ + Q + LV P+
Sbjct: 449 LNPPQMEAVKGVLSQ-------PLSLIQGPPGTGKTVTSASIVYHMSRQNMGQVLVTAPS 501
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
N+A+ L A +VV+L +S E
Sbjct: 502 NIAVDHLTAKISAIGLKVVRLAAKSRE 528
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 166/314 (52%), Gaps = 31/314 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 569 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 616
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 617 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 675
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P+ F V G+EE S
Sbjct: 676 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPVQDKPMFFYVTQGQEEIAGSGTSY 735
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI------QEKLGSKYVNSA 552
N E S V KI + + S++ IG+++PY Q + Q L SK
Sbjct: 736 LNRTEASNVEKITTRFLRCGVKSEQ---IGVITPYEGQRAFLVQHMQYQGSLHSKLYQE- 791
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 792 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 848
Query: 613 TLTRKKSVWEALVH 626
L+ K+++W L++
Sbjct: 849 VLS-KQALWNHLLN 861
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 495 NTAVDQLTEKIHK 507
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 156/282 (55%), Gaps = 17/282 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL +L
Sbjct: 615 VLVDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRMHP +S FP++ FYE ++D T R P+ P F
Sbjct: 674 GHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRLVADSSFPWPVVDTPMMFWAN 733
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VV 538
+G REE +S N VE V +I+ L+K I ++ IG+++PY Q +
Sbjct: 734 YG-REELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFM 789
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
++ L SK V++ S+D FQG E+D II+S VR+N+ SIGFLS+ +R+NVAL
Sbjct: 790 SMNSTLLSK--RDEYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 847
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
TRA++ L +LGN R L+R + +W L+ + C + D
Sbjct: 848 TRAKYGLLVLGNPRALSRNR-LWNHLLVHFREKGCLVDGPLD 888
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 16/93 (17%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRT 80
P L+ LN SQA AV S L++ + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 449 PKLTE-LNISQANAVRSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLNKEKI 500
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ LAA +VV+L +S E
Sbjct: 501 LVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSRE 533
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 25/323 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD CQL ++ K + A +SLFERL L
Sbjct: 641 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 699
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 700 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQ 759
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ K+ + + IG+++PY Q I
Sbjct: 760 MGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI----- 811
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 812 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 871
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRAR+ + ILGN + L+ K+ +W L+ +C + +L ++++ +K
Sbjct: 872 TRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECLVEGPLN-NLKQSMVQFQKP----K 925
Query: 659 ELLNPESRLFRSQRWKVNFSENF 681
++ N E RLF V ++NF
Sbjct: 926 KIYN-ERRLFYGGGPGVAANDNF 947
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + L+ + Q +
Sbjct: 469 FGAPGLPELNASQVYAVKSVLQR-------PISLIQGPPGTGKTVTSAALVYHMAKQGQG 521
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 522 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 565
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 566 TLHYQVRHL 574
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQ 789
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 790 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 841
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 842 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 901
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 902 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 936
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T ++ + Q +
Sbjct: 499 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSGAIVYHMAKQGQG 551
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ V R C + R V S VE +
Sbjct: 552 QVLVCAPSNVAVDQLAEKISS-TGLKVVRLCAKS---------------REAVSSPVEHL 595
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 596 TLHYQVRHL 604
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 735
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 736 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 795
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 796 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 847
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 848 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 907
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 908 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 942
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 505 FGAPGLPELNASQVLAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 557
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 558 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 601
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 602 TLHYQVRHL 610
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 152/275 (55%), Gaps = 17/275 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 609 VLIDESTQSAEPECIIPLML-GCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQL 667
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
LL+ QYRMHP +S FP++ FY+ +++ T +R + P+ P F +
Sbjct: 668 RLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSN 727
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + E IG+++PY Q +V +
Sbjct: 728 IGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGVKPSE---IGVITPYEGQRSYIVTTMQ 784
Query: 543 KLGS---KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
G+ +Y S V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALT
Sbjct: 785 NAGTSKKEYYKS----VEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALT 840
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
RA++ + ILGN R L+ K +W L+ R+CF
Sbjct: 841 RAKYGVVILGNPRVLS-KHELWYNLLTHFRDRRCF 874
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 447 LNQSQVDAIRSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKISGNQVLVCAPS 499
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 500 NVAVDQLCERIHRTGLKVVRLTAKSRE 526
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 735
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 736 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 795
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 796 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 847
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 848 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 907
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 908 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 942
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 505 FGAPGLPELNASQVLAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 557
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ V R C + R V S VE +
Sbjct: 558 QVLVCAPSNVAVDQLAEKISS-TGLKVVRLCAKS---------------REAVSSPVEHL 601
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 602 TLHYQVRHL 610
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 143/260 (55%), Gaps = 12/260 (4%)
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+ ++IDE+ Q E S IPL L IK +L GD QL + SK + SLFERL+
Sbjct: 823 DIVLIDESTQSSEPTSIIPLSLGSIKKLILVGDPVQLAPTIFSKDGADCGLKISLFERLA 882
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGPYSFI 484
L+ QYRMHP IS F + FY ++D V S+ +F P +GP F
Sbjct: 883 K-SIDVQFLNTQYRMHPVISKFISEEFYNGTLKDGENVSIDSFNNCKFHFDPSFGPMKFF 941
Query: 485 NVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
N+ + I+ S N E+ V ++ L + + + K KLS GI++PY Q++ I+E+L
Sbjct: 942 NLPKSDQIVIKKSIMNQDEIDKVFTLIKELIEKYPECK-KLSFGIITPYKLQMIQIKEQL 1000
Query: 545 GS---KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+Y+N + V +IDG QG E+D+II+S VR IGFLS+ +R+NVALTRA
Sbjct: 1001 NRSEHRYLN-----ISVSTIDGVQGSEKDIIIMSCVRCTEKYGIGFLSDRRRINVALTRA 1055
Query: 602 RHCLWILGNARTLTRKKSVW 621
+ L+++G + L K + W
Sbjct: 1056 KLGLYVIGTSWVL-EKDNTW 1074
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 12/86 (13%)
Query: 20 FGPSLSST----LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ 75
F P+L + LN+SQ A+ S L + + I LI GPPGTGKT T++ LL +LL
Sbjct: 675 FPPTLETICKEKLNESQLNAIKSSLVE------SGITLIQGPPGTGKTTTINYLLSVLLA 728
Query: 76 M--KFRTLVCTPTNVAIKELAARVVK 99
+ KF+ LVC P++ ++ E+A R +K
Sbjct: 729 IDKKFKILVCGPSHASVDEVAKRCLK 754
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 521 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 579
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 580 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 639
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 640 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 691
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 692 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 751
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 752 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 786
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 349 FGAPGLPELNASQVLAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 401
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ V R C + R V S VE +
Sbjct: 402 QVLVCAPSNVAVDQLAEKISS-TGLKVVRLCAKS---------------REAVSSPVEHL 445
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 446 TLHYQVRHL 454
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 25/323 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD CQL ++ K + A +SLFERL L
Sbjct: 650 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 708
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 709 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQ 768
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ K+ + + IG+++PY Q I
Sbjct: 769 MGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI----- 820
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 821 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 880
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRAR+ + ILGN + L+ K+ +W +L+ +C + +L ++++ +K
Sbjct: 881 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECLVEGPLN-NLKQSMVQFQKP----K 934
Query: 659 ELLNPESRLFRSQRWKVNFSENF 681
++ N E RLF + ++NF
Sbjct: 935 KIYN-ERRLFYGGGPGIASNDNF 956
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + L+ + Q +
Sbjct: 478 FGAPGLPELNASQVFAVKSVLQR-------PISLIQGPPGTGKTVTSAALVYHMAKQGQG 530
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 531 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 574
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 575 TLHYQVRHL 583
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 343 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 401
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 402 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 461
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 462 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 518
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 519 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 577
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 578 YGVIIVGNPKALS-KQPLWNHLLN 600
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 181 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 233
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 234 NIAVDQLTEKI 244
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 168/323 (52%), Gaps = 25/323 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD CQL ++ K + A +SLFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 705
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 706 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFYVQ 765
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ K+ + + IG+++PY Q I
Sbjct: 766 MGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI----- 817
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 818 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 877
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRAR+ + ILGN + L+ K+ +W +L+ +C + +L ++++ +K
Sbjct: 878 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECLVEGPLN-NLKQSMVQFQKP----K 931
Query: 659 ELLNPESRLFRSQRWKVNFSENF 681
++ N E RLF + ++NF
Sbjct: 932 KIYN-ERRLFYGGGPGIAANDNF 953
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + L+ + Q +
Sbjct: 475 FGAPGLPELNASQVFAVKSVLQR-------PISLIQGPPGTGKTVTSAALVYHMAKQGQG 527
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 528 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 571
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 572 TLHYQVRHL 580
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L +QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 721 LGVEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPSD---IGIITPYEGQRSYVVSSMQ 777
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 778 ATGS-FKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 836
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 837 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 867
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 440 LNASQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLCKISGSQVLVCAPS 492
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 493 NVAVDQLCERI 503
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 150/275 (54%), Gaps = 5/275 (1%)
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
ML VA + +VIDEAAQ E + IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1714 MLSGVAFD-FETVVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQEAEKLG 1771
Query: 416 FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
+ +SLF R+ + HLLSIQYRMHP IS FP+ FY++K++D + + + + +
Sbjct: 1772 YSQSLFVRMFERSPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAELTRQPWHKY 1831
Query: 475 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
M P+ F++ HS N E +V + + L IG+V+ Y
Sbjct: 1832 ELMR-PFKFLSTKAPESPGRMHSIINKEEANVALALYERLRTDNPSENFDYRIGVVTMYK 1890
Query: 535 AQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNSKR 593
AQV ++ +Y + ++DGFQG E+D+II+S VRS SIGFLS+ +R
Sbjct: 1891 AQVFELKRTFQQRYGLDIADRIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDRRR 1950
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
+NVA+TRA+ L+++GNA L R +WE LV A
Sbjct: 1951 LNVAVTRAKSNLFVIGNAEHLRRGDPIWERLVATA 1985
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+ QA+A+L L LI GPPGTGKTKT+ L+ +
Sbjct: 1475 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSNRKGPSMSVQAG 1528
Query: 75 --QMKF----RTLVCTPTNVAIKELAARV 97
Q K + L+C P+N AI E+A R
Sbjct: 1529 QAQGKLGATKKILLCAPSNAAIDEVAKRA 1557
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 631 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 689
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 690 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 749
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 750 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 806
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 807 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 865
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 866 YGVIIVGNPKALS-KQPLWNHLLN 888
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 469 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 521
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 522 NIAVDQLTEKI 532
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLLN 890
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 634 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 692
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 693 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 752
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 753 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 809
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 810 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 868
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 869 YGVIIVGNPKALS-KQPLWNHLLN 891
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 472 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 524
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 525 NIAVDQLTEKI 535
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLLN 890
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLLN 890
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS-STVRKRSYEKRFLHGPMYGPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ S++ + + F P F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSN 699
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPGD---IGIITPYEGQRSYIVSSMQ 756
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 757 ATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 816 YGLAILGNPKVLS-KHPLWNCLLQHFKERHCL 846
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 419 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPS 471
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E + L+
Sbjct: 472 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELLKLN 526
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQ 789
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 790 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 841
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 842 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 901
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 902 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 936
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T ++ + Q +
Sbjct: 499 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSGAIVYHMAKQGQG 551
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 552 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 595
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 596 TLHYQVRHL 604
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLLN 890
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 556 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 614
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 615 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 674
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 675 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 731
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 732 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 790
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 791 YGVIIVGNPKALS-KQPLWNHLLN 813
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPTNVAIKELAARV 97
+ LI GPPGTGKT T + ++ L Q LVC P+N+A+ +L ++
Sbjct: 410 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKI 457
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 750
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 751 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 807
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 808 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 866
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 867 YGVIIVGNPKALS-KQPLWNHLLN 889
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 470 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 522
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 523 NIAVDQLTEKI 533
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 696 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 755
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 756 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 812
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 813 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 871
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 872 YGVIIVGNPKALS-KQPLWNHLLN 894
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 475 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 527
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 528 NIAVDQLTEKI 538
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 148/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K +L GD CQL ++ K + A +SLFERL L
Sbjct: 660 VLIDESTQATEPECLIPLVL-GAKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 718
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP++ FYE +++ TV +R P+ F V
Sbjct: 719 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQ 778
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 779 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 830
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 831 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 890
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 891 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 925
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 488 FGAPGLPELNASQVFAVKSVLQR-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 540
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 541 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 584
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 585 TLHYQVRHL 593
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLLN 890
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQ 789
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 790 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 841
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 842 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 901
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 902 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 936
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T ++ + Q +
Sbjct: 499 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSGAIVYHMAKQGQG 551
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 552 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 595
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 596 TLHYQVRHL 604
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 804 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 862
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 863 YGVIIVGNPKALS-KQPLWNHLL 884
Score = 46.6 bits (109), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 466 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 518
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 519 NIAVDQLTEKI 529
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 804 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 862
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 863 YGVIIVGNPKALS-KQPLWNHLL 884
Score = 46.6 bits (109), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 466 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 518
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 519 NIAVDQLTEKI 529
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G+K VL GD CQL ++ K + A +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQ 789
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 790 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 841
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 842 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 901
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 902 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 936
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T ++ + Q +
Sbjct: 499 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSGAIVYHMAKQGQG 551
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 552 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 595
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 596 TLHYQVRHL 604
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 809 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 867
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 868 YGVIIVGNPKALS-KQPLWNHLL 889
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 471 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQDNGPVLVCAPS 523
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 524 NIAVDQLTEKI 534
>gi|58270392|ref|XP_572352.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228610|gb|AAW45045.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2245
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 15/303 (4%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
LK A + +T S + ++A ++IDEAAQ E IPL+ G K V+ GD
Sbjct: 1701 LKDADIICATLSGAGH-DTLAAHTFETVIIDEAAQAIEMSCLIPLKY-GCKRCVMVGDPN 1758
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP S + + + +SLF R++ S LLSIQYRMHP IS P+ FY +++D
Sbjct: 1759 QLPPTTFSTNAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKD 1818
Query: 460 SSTVRKRS---YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYK 516
++ K++ + +R + +GPY F NV G E S +N E +++ L
Sbjct: 1819 GPSMAKKTAAIWHQRNI----FGPYRFFNV-EGTEMKTGTSTKNPAEALAAVELYRRL-S 1872
Query: 517 AWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
A ++ L+ +G++S Y Q+ ++ K + ++ V+ ++DGFQG E+D+II+
Sbjct: 1873 ADFGTRVNLAMRVGVISMYREQLWELKRKFTEAFGSAILELVEFNTVDGFQGQEKDIIIL 1932
Query: 575 STVRSN-NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
S VRS N IGFL +++R+NVALTRA+ L+I GN TL R W+ +V DA R
Sbjct: 1933 SCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDARDRGF 1992
Query: 634 FFN 636
F N
Sbjct: 1993 FVN 1995
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 19/85 (22%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
+LN+ QA+AVL L ++R LI GPPGTGKTKT+S L+ +
Sbjct: 1492 SLNEPQAKAVLGAL-EVRG-----FALIQGPPGTGKTKTISGLVGKWMSERRVPISVDGQ 1545
Query: 76 --MKFRTLVCTPTNVAIKELAARVV 98
+K + LVC P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 342 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 400
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 401 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 460
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 461 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 517
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 518 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 576
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 577 YGVIIVGNPKALS-KQPLWNHLLN 599
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 180 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 232
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 233 NIAVDQLTEKI 243
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 519 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 577
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 578 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 637
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 638 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 694
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 695 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 753
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 754 YGVIIVGNPKALS-KQPLWNHLLN 776
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 357 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 409
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 410 NIAVDQLTEKI 420
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 149/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL + G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 585 VLIDESTQSSEPECMIPLVM-GCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 643
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T R + P+ P F +
Sbjct: 644 GCAPIRLNVQYRMHPCLSSFPSNMFYDGSLQNGVTSDDRLLKDVDFPWPISDKPMMFWSN 703
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + +IGI++PY Q V +
Sbjct: 704 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---AIGIITPYEGQRSYVVSSMQ 760
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L Y A ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 761 LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 820
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 821 GLVILGNPKVLS-KHPLWNYLLRHFKEQDCL 850
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 423 LNPSQVNAVKAVLQK-------PLSLIQGPPGTGKTVTSATVIYHLAKLTGGQVLVCAPS 475
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 476 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 509
>gi|302789261|ref|XP_002976399.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
gi|300156029|gb|EFJ22659.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
Length = 766
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 171/340 (50%), Gaps = 9/340 (2%)
Query: 301 HKRRSEC--HFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTAS-SSYML 357
H +S C H V ++LQS ++ + ++ L+ A++ ST S S +
Sbjct: 367 HSVQSVCMDHLVDQRLQSIDRSMSSARGGGGGRERERVRLAILEEAAIVCSTLSFSGSSV 426
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
S + +VIDEAAQ E + +PL G K A L GD QLPA V S + + +G
Sbjct: 427 FSRMKRGFDVVVIDEAAQAVEPSTLVPLT-HGCKQAFLVGDPIQLPATVLSTEAVKHGYG 485
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
S+F+R GY +L+ QYRMHP I FP+ FY + D + V +++ + +
Sbjct: 486 TSMFKRFQKAGYPVQMLNTQYRMHPQIRDFPSKEFYGEALEDGAEVEQQT-SRAWHEYCC 544
Query: 478 YGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
+GP++F ++ GRE S N E V+ + +L + + K + ++SPY
Sbjct: 545 FGPFAFFDI-EGRETQPPGSGSYINSDEAEFVLVLYRHLIALYPELKGGPHVAVISPYKY 603
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
QV ++ + A + + ++DGFQG E+D+ I S VR+N IGF+S+ +R+N
Sbjct: 604 QVTTLRTRFAEVLGKDAARLIDINTVDGFQGREKDIAIFSCVRANKSKGIGFVSDFRRMN 663
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
V LTRAR + ++G A L R+ W L+ A R F
Sbjct: 664 VGLTRARASMLVVGCAAAL-RQDEHWGNLIKHAQQRNRMF 702
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 151/283 (53%), Gaps = 17/283 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ IDEA Q E IP+ + G + +L GD QLP + + + E+ SLFERL
Sbjct: 435 FQVVAIDEATQSHEPGLLIPI-IKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERL 493
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G +LL QYRMHPSI+ FP+ YFY + + + S F P +FI
Sbjct: 494 VRSGVEPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCTQ--SISNYFPWPNPQTPIAFI 551
Query: 485 NVFGGREEFIEH---SCRNMVEVSVVMKILLNLYKAWIDSKEK--------LSIGIVSPY 533
V G EE++ S N E VV++ + + + W+ ++ +IGI++PY
Sbjct: 552 PVLG--EEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPY 609
Query: 534 SAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
+ Q+ I +++ + V+V ++DGFQG E+D+IIISTVRSN S+GFL + +R
Sbjct: 610 AGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRR 669
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
+NVA+TR+R L ++GNA TL+R W+ + + C +
Sbjct: 670 LNVAITRSRSGLIVIGNANTLSRNDH-WKRWLEWISHHGCIYT 711
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 819
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 820 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 878
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 879 YGVIIVGNPKALS-KQPLWNHLLN 901
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 482 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 534
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 535 NIAVDQLTEKI 545
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 155/277 (55%), Gaps = 24/277 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E + IPL+ G K ++ GD QLP V S ++ + +SLF R+
Sbjct: 1593 VIIDEACQCTELSAIIPLRY-GAKRCIMVGDPNQLPPTVLSSKASSLNYDQSLFVRMEK- 1650
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINV 486
S +LL++QYRMHPSIS FP+ FY+ K++D + + KR H GPY F ++
Sbjct: 1651 KCSPYLLNVQYRMHPSISAFPSLEFYDGKLKDGPDM--ANITKRPWHSIDSLGPYKFFDI 1708
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
GR E S N E V +++ LL ++ D K IG++SPY QV
Sbjct: 1709 ISGRHEQNSRTMSYNNPEEARVAVELVDFLLKRFENKYDFTGK--IGVISPYKEQVF--- 1763
Query: 542 EKLGSKYVNSAGFAVK----VMSIDGFQGGEEDLIIISTVRSNN---GGSIGFLSNSKRV 594
KL ++ N G ++ +IDGFQG E+++II+S VR+N+ +GFL + +R+
Sbjct: 1764 -KLRREFRNHFGLLIEKYVDFNTIDGFQGQEKEIIILSCVRANDSDHASGVGFLKDFRRM 1822
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
NVA TRA+ LWILG+ R+L R K +W L+ +A R
Sbjct: 1823 NVAFTRAKSSLWILGHHRSLKRDK-LWNHLITNAKQR 1858
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 819
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 820 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 878
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 879 YGVIIVGNPKALS-KQPLWNHLLN 901
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 482 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 534
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 535 NIAVDQLTEKI 545
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 815 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 873
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 874 YGVIIVGNPKALS-KQPLWNHLL 895
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 477 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 529
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 530 NIAVDQLTEKI 540
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 815 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 873
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 874 YGVIIVGNPKALS-KQPLWNHLL 895
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 477 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 529
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 530 NIAVDQLTEKI 540
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 804 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 862
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 863 YGVIIVGNPKALS-KQPLWNHLL 884
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + I GPPGTGKT T + ++ L Q LVC P+
Sbjct: 466 LNHSQVYAVKTVLQR-------PLSFIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 518
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 519 NIAVDQLTEKI 529
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 804 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 862
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 863 YGVIIVGNPKALS-KQPLWNHLL 884
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 466 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 518
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 519 NIAVDQLTEKI 529
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 670 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 729
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 730 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 786
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 787 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 845
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 846 YGVIIVGNPKALS-KQPLWNHLLN 868
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 449 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 501
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 502 NIAVDQLTEKI 512
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 578 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 636
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 637 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 696
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 697 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 753
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 754 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 812
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 813 YGVIIVGNPKALS-KQPLWNHLLN 835
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 416 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 468
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 469 NIAVDQLTEKI 479
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 147/276 (53%), Gaps = 17/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K V GD CQL ++ K + A +SLFERL L
Sbjct: 635 VLIDESTQATEPECLIPLVL-GAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 693
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP++ FYE +++ TV +R P+ F V
Sbjct: 694 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQ 753
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 754 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV-VPSQACIGVITPYEGQRAYI----- 807
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 808 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 867
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 868 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 902
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 33/128 (25%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR 79
FG LN SQ AV + L++ I LI GPPGTGKT T + ++
Sbjct: 474 FGAPGLPELNASQVLAVKNVLQK-------PISLIQGPPGTGKTVTSAAIV--------- 517
Query: 80 TLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 518 -LVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHLT 560
Query: 140 LDYRVKRL 147
L Y+V+ L
Sbjct: 561 LHYQVRHL 568
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 607 ILIDECMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKGAARAGLSQSLFERLVVL 665
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP+++FYE +++ +R + P F
Sbjct: 666 GIRPLRLEVQYRMHPSLSEFPSNFFYEGSLQNGVYAEERRLKGVDFPFPQPDKPMFFYCC 725
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-VVAIQEKL 544
G+EE S N E ++V KI+ K+ + ++ IG+++PY Q +Q
Sbjct: 726 NGQEEIAASGTSYLNRTEAALVEKIVTRFLKSSVKPEQ---IGVITPYEGQRAFLVQYMQ 782
Query: 545 GSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S ++S + ++V S+D FQG E+DLII+S VRSN IGFL++ +R+NVALTRAR+
Sbjct: 783 YSGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRARY 842
Query: 604 CLWILGNARTLTRKKSVWEALV 625
+ I+GN + L+ K+ +W L+
Sbjct: 843 GIIIVGNPKVLS-KQPLWNHLL 863
Score = 47.4 bits (111), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 440 LNRSQVYAVRHALQR-------PLSLIQGPPGTGKTVTSATIVYQLAKQGHGPVLVCAPS 492
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDS 133
N+A+ +L ++ + + V R C R+A+ P+ + L ++V++
Sbjct: 493 NIAVDQLTEKIHR-TRLKVVRLCAKSREAINSPVSFLALHNQVRNMEVNA 541
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 666 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 724
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 725 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 784
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 785 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 841
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 842 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 900
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 901 YGVIIVGNPKALS-KQPLWNHLLN 923
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 504 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 556
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 557 NIAVDQLTEKI 567
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 730
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 731 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 787
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 788 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 846
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 847 YGVIIVGNPKALS-KQPLWNHLLN 869
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 450 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 502
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
N+A+ +L +VV+L +S R+A+ P+ L L N R
Sbjct: 503 NIAVDQLTEKIHQTGLKVVRLCAKS-----REAIDSPV-SFLALHNQTR 545
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 646 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 704
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 705 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 764
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 765 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 821
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 822 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 880
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 881 YGVIIVGNPKALS-KQPLWNHLL 902
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 484 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 536
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 537 NIAVDQLTEKI 547
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 630 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 688
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 689 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 748
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 749 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 805
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 806 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 864
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 865 YGVIIVGNPKALS-KQPLWNHLLN 887
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 468 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 520
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 521 NIAVDQLTEKI 531
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 696 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 755
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 756 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 812
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 813 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 871
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 872 YGVIIVGNPKALS-KQPLWNHLLN 894
Score = 46.6 bits (109), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 475 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 527
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 528 NIAVDQLTEKI 538
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 647 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 705
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 706 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 765
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 766 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 822
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 823 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 881
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 882 YGVIIVGNPKALS-KQPLWNHLLN 904
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 485 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 537
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 538 NIAVDQLTEKI 548
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 179/360 (49%), Gaps = 40/360 (11%)
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN------------LPSAVEKDLL-- 332
E L+ + + + + + H LRKLQ +E L +E++LL
Sbjct: 528 EALASPVSRLMLHIQAQNVKGHTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMA 587
Query: 333 EDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D++ C+ L S HSV +IDE+ Q E E IPL + G +
Sbjct: 588 ADVVCCTCVTAGDARLERLS----FHSV--------LIDESTQATEPECLIPL-MVGCRQ 634
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
VL GD CQL ++ K + A +SLFER LG L +QYRMHP++S FP++ F
Sbjct: 635 VVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVF 694
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGP--YSFINVFGGREEFIEH--SCRNMVEVSVVM 508
YE +++ T R + F P P F G+EE + S N E + V
Sbjct: 695 YEGSLQNGVTAEDRCKKIDF---PWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVE 751
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG-SKYVNSAGFA-VKVMSIDGFQG 566
KI+ + K + +IG+++PY Q + L S +N+ + +++ S+D FQG
Sbjct: 752 KIVTKMLKIGVHPN---TIGVITPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQG 808
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E+D II+S VR+N IGFL++ +R+NVALTRAR+ L ++GN + L K+ +W L+H
Sbjct: 809 REKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALC-KQPLWNQLLH 867
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 20/103 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q+ + + LV P+
Sbjct: 449 LNHSQVFAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPS 501
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILL 122
N A+ +L +VV+L S R+AL P+ ++L
Sbjct: 502 NTAVDQLCEKIDRTGLKVVRLCARS-----REALASPVSRLML 539
>gi|384247387|gb|EIE20874.1| hypothetical protein COCSUDRAFT_48445 [Coccomyxa subellipsoidea
C-169]
Length = 863
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 161/345 (46%), Gaps = 48/345 (13%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D +K L+ A + ST S S L + P + +VIDEAAQ E + +PL ++G
Sbjct: 424 DRIKLSILEEAHIVCSTLSFSGSGLFARMSRPFDVVVIDEAAQAVEPSTLVPL-VTGCHQ 482
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-------------------- 432
L GD QLPA V S + E + +SLF+RL G+
Sbjct: 483 VYLVGDPVQLPATVISSRAVEHGYDKSLFKRLQSSGFPVQASPQGSPTQNQLDESRPAPC 542
Query: 433 -----------------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+L QYRMHP+IS FP++ FY+ +RD + H
Sbjct: 543 NACYSMVSTTIPKLPCKMLDTQYRMHPAISAFPSAEFYQGSLRDGEGTEASTTRAWHEHA 602
Query: 476 PMYGPYSFINVFGGREEFIEHSCRNMV---EVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+GP + V G E +E +++ E +V+ I L + + + I+SP
Sbjct: 603 -CFGPLALFQVAG--REMVEEGATSIINKQEAEMVLCIYRELVSRYPHLRTSHQVAIISP 659
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN--GGSIGFLSN 590
YSAQV ++ K V V +IDGFQG E+D++I S VRS+ G IGF+++
Sbjct: 660 YSAQVKLLRAKFVEALGAEGRHLVDVNTIDGFQGREKDIVIFSAVRSSTQRKGKIGFVAD 719
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
+RVNVALTRAR L ++ N + L R W LV A A +C +
Sbjct: 720 ERRVNVALTRARASLLVVANFKVLERDGH-WRNLVKHATANKCLY 763
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 579 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 637
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 638 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 697
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 698 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 754
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 755 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 813
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 814 YGVIIVGNPKALS-KQPLWNHLLN 836
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 417 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 469
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 470 NIAVDQLTEKI 480
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 565 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 623
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 624 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 683
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 684 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 740
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 741 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 799
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 800 YGVIIVGNPKALS-KQPLWNHLLN 822
Score = 46.6 bits (109), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 403 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 455
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 456 NIAVDQLTEKI 466
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 621 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 679
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 680 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 739
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 740 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 796
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 797 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 855
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 856 YGVIIVGNPKALS-KQPLWNHLLN 878
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 459 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGSGPVLVCAPS 511
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
N+A+ +L +VV+L +S R+A+ P+ L L N R
Sbjct: 512 NIAVDQLTEKIHQTGLKVVRLCAKS-----REAIDSPV-SFLALHNQTR 554
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 181/355 (50%), Gaps = 35/355 (9%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNEL---------NLPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL NL E+++ + D++ C+ A
Sbjct: 583 VRHLDTSEKSELH-KLQQLKDEQGELSSSDEKKYKNLKRQTEREITQSADVICCTCVGAA 641
Query: 345 SLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPA 404
L LS ++ V +IDE+ Q E E IPL L G+K VL GD CQL
Sbjct: 642 DLRLS----NFRFRQV--------LIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGP 688
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
++ K + A +SLFERL LG L +QYRMHP++S FP++ FYE +++ T+
Sbjct: 689 VIMCKKAARAGLAQSLFERLVLLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 748
Query: 465 KRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK 522
+R P+ F V G+EE N E + V K++ K+ +
Sbjct: 749 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPS 808
Query: 523 EKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+ IG+++PY Q +V + GS ++V S+D FQG E+D II+S VRS
Sbjct: 809 Q---IGVITPYEGQRAYIVNYMARNGS-LRQQLYKEIEVASVDSFQGREKDYIILSCVRS 864
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
N IGFL++ +R+NVALTRAR+ + ILGN + L+ K+ +W L+ +C
Sbjct: 865 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS-KQPLWNGLLTHYKEHECL 918
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 481 FGVPGLPELNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 533
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 534 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 577
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 578 TLHYQVRHL 586
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 591 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 649
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 650 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 709
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 710 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 766
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 767 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 825
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 826 YGVIIVGNPKALS-KQPLWNHLLN 848
Score = 46.6 bits (109), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 429 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 481
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 482 NIAVDQLTEKI 492
>gi|134117856|ref|XP_772309.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 2245
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 15/303 (4%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
LK A + +T S + ++A ++IDEAAQ E IPL+ G K ++ GD
Sbjct: 1701 LKDADIICATLSGAGH-DTLAAHTFETVIIDEAAQAIEMSCLIPLKY-GCKRCIMVGDPN 1758
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP S + + + +SLF R++ S LLSIQYRMHP IS P+ FY +++D
Sbjct: 1759 QLPPTTFSTNAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKD 1818
Query: 460 SSTVRKRS---YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYK 516
++ K++ + +R + +GPY F NV G E S +N E +++ L
Sbjct: 1819 GPSMAKKTAAIWHQRNI----FGPYRFFNV-EGTEMKTGTSTKNPAEALAAVELYRRL-S 1872
Query: 517 AWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
A ++ L+ +G++S Y Q+ ++ K + ++ V+ ++DGFQG E+D+II+
Sbjct: 1873 ADFGTRVNLAMRVGVISMYREQLWELKRKFTEAFGSAILELVEFNTVDGFQGQEKDIIIL 1932
Query: 575 STVRSN-NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
S VRS N IGFL +++R+NVALTRA+ L+I GN TL R W+ +V DA R
Sbjct: 1933 SCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDARDRGF 1992
Query: 634 FFN 636
F N
Sbjct: 1993 FVN 1995
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
+LN+ QA+AVL L LI GPPGTGKTKT+S L+ +
Sbjct: 1492 SLNEPQAKAVLGAL------EVKGFALIQGPPGTGKTKTISGLVGKWMSERRVPISVDGQ 1545
Query: 76 --MKFRTLVCTPTNVAIKELAARVV 98
+K + LVC P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 670 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 729
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 730 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 786
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 787 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 845
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 846 YGVIIVGNPKALS-KQPLWNHLLN 868
Score = 46.2 bits (108), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 449 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 501
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 502 NIAVDQLTEKI 512
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 556 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 614
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 615 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 674
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 675 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 731
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 732 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 790
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 791 YGVIIVGNPKALS-KQPLWNHLLN 813
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 394 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 446
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 447 NIAVDQLTEKI 457
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 179/360 (49%), Gaps = 40/360 (11%)
Query: 287 EGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELN------------LPSAVEKDLL-- 332
E L+ + + + + + H LRKLQ +E L +E++LL
Sbjct: 504 EALASPVSRLMLHIQAQNVKGHTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMA 563
Query: 333 EDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D++ C+ L S HSV +IDE+ Q E E IPL + G +
Sbjct: 564 ADVVCCTCVTAGDARLERLS----FHSV--------LIDESTQATEPECLIPL-MVGCRQ 610
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
VL GD CQL ++ K + A +SLFER LG L +QYRMHP++S FP++ F
Sbjct: 611 VVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVF 670
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGP--YSFINVFGGREEFIEH--SCRNMVEVSVVM 508
YE +++ T R + F P P F G+EE + S N E + V
Sbjct: 671 YEGSLQNGVTAEDRCKKIDF---PWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVE 727
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG-SKYVNSAGFA-VKVMSIDGFQG 566
KI+ + K + +IG+++PY Q + L S +N+ + +++ S+D FQG
Sbjct: 728 KIVTKMLKIGVHPN---TIGVITPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQG 784
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E+D II+S VR+N IGFL++ +R+NVALTRAR+ L ++GN + L K+ +W L+H
Sbjct: 785 REKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALC-KQPLWNQLLH 843
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 20/103 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q+ + + LV P+
Sbjct: 425 LNHSQVFAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPS 477
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILL 122
N A+ +L +VV+L S R+AL P+ ++L
Sbjct: 478 NTAVDQLCEKIDRTGLKVVRLCARS-----REALASPVSRLML 515
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 628
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 629 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 688
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 689 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 745
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 746 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 804
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 805 YGVIIVGNPKALS-KQPLWNHLLN 827
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 408 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 460
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 461 NIAVDQLTEKI 471
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 602 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T +R + P F V
Sbjct: 661 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFDFQWPQPDKPMFFYVT 720
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 721 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 777
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 778 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 836
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 837 YGVIIVGNPKALS-KQPLWNHLLN 859
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 440 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 492
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 493 NIAVDQLTEKI 503
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T++ R P+ P F +
Sbjct: 661 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQDRLRPDVDFPWPVADSPMMFWSN 720
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + SIG+++PY Q +V+ +
Sbjct: 721 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVHPQ---SIGVITPYEGQRSFIVSSMQ 777
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 778 TNGT-FKKELYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 836
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 837 YGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 867
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 440 LNSSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKINGGQVLVCAPS 492
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 493 NVAVDQLCERI 503
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 567 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 625
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 626 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 685
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 686 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 742
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 743 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 801
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 802 YGVIIVGNPKALS-KQPLWNHLLN 824
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 405 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 457
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 458 NIAVDQLTEKI 468
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 626
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 627 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 686
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 687 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 744 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 802
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 803 YGVIIVGNPKALS-KQPLWNHLLN 825
Score = 46.6 bits (109), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 406 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 458
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 459 NIAVDQLTEKI 469
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 730
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 731 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 787
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 788 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 846
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 847 YGVIIVGNPKALS-KQPLWNHLLN 869
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 450 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 502
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 503 NIAVDQLTEKI 513
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 628
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 629 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 688
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 689 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 745
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 746 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 804
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 805 YGVIIVGNPKALS-KQPLWNHLLN 827
Score = 46.6 bits (109), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 408 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 460
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 461 NIAVDQLTEKI 471
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVT 731
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 732 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 788
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 789 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 847
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 848 YGVIIVGNPKALS-KQPLWNHLLN 870
Score = 46.6 bits (109), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 451 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 503
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 504 NIAVDQLTEKI 514
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 634
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 635 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 694
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 695 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 751
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 752 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 810
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 811 YGVIIVGNPKALS-KQPLWNHLL 832
Score = 46.6 bits (109), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 414 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 466
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 467 NIAVDQLTEKI 477
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 610 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 668
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 669 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 728
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 729 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 785
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 786 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 844
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 845 YGVIIVGNPKALS-KQPLWNHLLN 867
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 448 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGSGPVLVCAPS 500
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
N+A+ +L +VV+L +S R+A+ P+ L L N R
Sbjct: 501 NIAVDQLTEKIHQTGLKVVRLCAKS-----REAIDSPV-SFLALHNQTR 543
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 11/289 (3%)
Query: 332 LEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
LED + + L +A + +T + +L S A +++DE+ Q E S L +
Sbjct: 467 LEDYIHNDVLGKADVICATCIGAGHDLLASRA---FPIVILDESTQATEPASLCAL-VHN 522
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPN 449
+H VL GD QLP V S + + SLF R+ +G ++L IQYRMHP IS FP+
Sbjct: 523 SQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPS 582
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVM 508
+FY KI+D +R P +F+NV G ++ + +S N E V
Sbjct: 583 VHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVF 642
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE---KLGSKYVNSAGFAVKVMSIDGFQ 565
+ L++ + D + IG+++PY+ QV + + + G N + + S+DG+Q
Sbjct: 643 Q-LVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQ 701
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
G E+++II + VRSN+ G +GFL + +R+NVALTRAR L ++GN RTL
Sbjct: 702 GREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLLVVGNRRTL 750
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 626
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 627 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 686
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 687 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 744 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 802
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 803 YGVIIVGNPKALS-KQPLWNHLLN 825
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 406 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 458
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 459 NIAVDQLTEKI 469
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 679 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 737
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 738 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 797
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 798 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 854
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 855 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 913
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 914 YGVIIVGNPKALS-KQPLWNHLLN 936
Score = 46.2 bits (108), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 517 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 569
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 570 NIAVDQLTEKI 580
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + +R P+ P F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSN 699
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQD---IGIITPYEGQRSYIVSSMQ 756
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 757 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 816 YGLAILGNPKVLS-KHPLWNCLLQHFKERHCL 846
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 419 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 471
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKV-DSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L +E++++ D+ +E I L+
Sbjct: 472 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG---FLSLHEQVRINDTNIELIKLN 526
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 11/289 (3%)
Query: 332 LEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG 389
LED + + L +A + +T + +L S A +++DE+ Q E S L +
Sbjct: 468 LEDYIHNDVLGKADVICATCIGAGHDLLASRA---FPIVILDESTQATEPASLCAL-VHN 523
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPN 449
+H VL GD QLP V S + + SLF R+ +G ++L IQYRMHP IS FP+
Sbjct: 524 SQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPS 583
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVM 508
+FY KI+D +R P +F+NV G ++ + +S N E V
Sbjct: 584 VHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVF 643
Query: 509 KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE---KLGSKYVNSAGFAVKVMSIDGFQ 565
+ L++ + D + IG+++PY+ QV + + + G N + + S+DG+Q
Sbjct: 644 Q-LVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQ 702
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
G E+++II + VRSN+ G +GFL + +R+NVALTRAR L ++GN RTL
Sbjct: 703 GREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLLVVGNRRTL 751
>gi|302811082|ref|XP_002987231.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
gi|300145128|gb|EFJ11807.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
Length = 820
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 7/298 (2%)
Query: 341 LKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
L+ A++ ST S S + S + +VIDEAAQ E + +PL G K A L GD
Sbjct: 453 LEEAAIVCSTLSFSGSSVFSRMKRGFDVVVIDEAAQAVEPSTLVPLT-HGCKQAFLVGDP 511
Query: 400 CQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA V S + + +G S+F+R GY +L+ QYRMHP I FP+ FY + D
Sbjct: 512 IQLPATVLSTEAVKHGYGTSMFKRFQKAGYPVQMLNTQYRMHPQIRDFPSKEFYGEALED 571
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKA 517
+ V +++ + + +GP++F ++ GRE S N E V+ + +L
Sbjct: 572 GAEVEQQT-SRAWHEYCCFGPFAFFDI-EGRETQPPGSGSYINSDEAEFVLVLYRHLIAL 629
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ + K + ++SPY QV ++ + A + + ++DGFQG E+D+ I S V
Sbjct: 630 YPELKGGPHVAVISPYKHQVTTLRTRFAEVLGKDAARLIDINTVDGFQGREKDIAIFSCV 689
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
R+N IGF+S+ +R+NV LTRAR + ++G A L R+ W L+ A R F
Sbjct: 690 RANKSKGIGFVSDFRRMNVGLTRARASMLVVGCAAAL-RQDEHWGNLIKHAQQRNRMF 746
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + +R P+ P F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSN 699
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQD---IGIITPYEGQRSYIVSSMQ 756
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 757 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 816 YGLAILGNPKVLS-KHPLWNCLLQHFKERHCL 846
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 419 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 471
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKV-DSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L +E++++ D+ +E I L+
Sbjct: 472 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG---FLSLHEQVRINDTNIELIKLN 526
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 43/346 (12%)
Query: 303 RRSECHFVLRKLQSSFNELN------------LPSAVEKDLLE--DLLKSFCLKRASLFL 348
R+ C+ L+K Q +E L A E++LL+ D++ + C+ L
Sbjct: 545 RKMSCNVELQKFQQLKDETGELSMADEKRYRALKKAAERELLKAADVICTTCVGAGDPRL 604
Query: 349 STASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
+ HS+ +IDE+ Q E E +P+ L G+K +L GD CQL +V
Sbjct: 605 V----RFKFHSI--------LIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMC 651
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
K + A +SLFERL LG L +QYRMHP +S FP+++FYE +++ R
Sbjct: 652 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADDRKL 711
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
K P+ V G+EE S N E + V KI + + +
Sbjct: 712 SKIEFPWPVADKPMLFYVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRCGVKPDQ--- 768
Query: 527 IGIVSPYSA------QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN 580
IGI++PY Q + Q L +K +++ S+D FQG E+DLII+S VRSN
Sbjct: 769 IGIITPYEGQRAYLVQYMQYQAPLPAKVYQE----IEIASVDAFQGREKDLIIMSCVRSN 824
Query: 581 NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFL++ +R+NVALTRA++ + I+GN + L+ K+ +W L++
Sbjct: 825 EHQGIGFLNDPRRLNVALTRAKYGILIVGNPKVLS-KQQLWNHLLN 869
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 16/114 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+++ LVC P+
Sbjct: 450 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKINGGPVLVCAPS 502
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVE 136
N+A+ +L ++ +K+V+ V R+A+ P+ + L +N+ K+ VE
Sbjct: 503 NIAVDQLTEKIHRTGLKVVR--VCAKSREAIDSPVSFLAL--HNQVRKMSCNVE 552
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 286 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 344
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 345 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 404
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 405 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 461
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 462 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 520
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 521 YGVIIVGNPKALS-KQPLWNHLL 542
Score = 46.6 bits (109), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 124 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 176
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 177 NIAVDQLTEKI 187
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 179/338 (52%), Gaps = 45/338 (13%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPA 404
LS +SS ML ++DEAAQ E E+ L+GI + AVL GD QL
Sbjct: 575 LSLCTSSIMLKQKFFAS----IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQP 625
Query: 405 MVESKVSNEACFGRSLFER-LSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV 463
S + EA F +S+FER ++ + +L QYRMHP+IS F N FY +K+ + +
Sbjct: 626 TCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSS 685
Query: 464 RKRSYEKRFLHG-PMY-GPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWI 519
+ R ++ R ++ P Y P FIN G E++ S N EV ++ +++ K I
Sbjct: 686 KDR-FDNRIINFFPDYTNPIMFINC-DGTEQYGSSGTSYNNAGEVQIIQEVVEKFLKNKI 743
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
E IGI+SPY AQ ++L S+YV++ +KV +IDGFQG E++ II S VRS
Sbjct: 744 KENE---IGIISPYQAQ-----QELISQYVSTK---IKVANIDGFQGNEKEYIIFSCVRS 792
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF---- 635
N +GF+++ KR+NVALTRA+ L I+GN TL K VW L+H ++ F
Sbjct: 793 NQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSK-VWNMLIHHFYLKKALFELKG 851
Query: 636 ------NADDDKD----LGKAILAVKKELDELDELLNP 663
N ++ K+ L K+ V+ E+D+ D P
Sbjct: 852 HKFVQYNVENQKEFNCPLEKSPFQVQYEVDDFDSCWKP 889
Score = 43.5 bits (101), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-- 79
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K+R
Sbjct: 307 PNLSN-LNDYQRKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKYRFY 358
Query: 80 --------TLVCTPTNVAIKELAARV-------VKLVKESVERDCRDAL 113
LVC +N A+ + +++ V++V + +C D +
Sbjct: 359 NINRGEKKLLVCASSNNAVDVICSKLIEKDIPTVRVVADEQFENCSDKI 407
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + +R P+ P F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSN 699
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQD---IGIITPYEGQRSYIVSSMQ 756
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 757 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 816 YGLAILGNPKVLS-KHPLWNCLLQHFKERHCL 846
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 419 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 471
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKV-DSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L +E++++ D+ +E I L+
Sbjct: 472 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG---FLSLHEQVRINDTNIELIKLN 526
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 571 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 629
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR-SYEKRFLHGPMYGPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ T R E F + P F +
Sbjct: 630 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSN 689
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + K+ IGI++PY Q +V+ +
Sbjct: 690 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQRSYIVSSMQ 746
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 747 ATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 805
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R
Sbjct: 806 YGLVILGNPKVLS-KHPLWNCLLQHFKERHTL 836
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 409 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPS 461
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 462 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 516
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 179/356 (50%), Gaps = 18/356 (5%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSY--M 356
++H RR + R NE + + E++L + L A + +T S S M
Sbjct: 1461 IVHIRRRKAELGQRIDSVKDNEKS--AGREQELNRKRAQQAVLDEAHVICATLSGSGHDM 1518
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
+++E ++IDEAAQ E S IPL+ +K V+ GD QLP V SK + + +
Sbjct: 1519 FSGLSIE-FETVIIDEAAQCVEMSSLIPLKYGCVK-CVMVGDPKQLPPTVFSKEAAKFQY 1576
Query: 417 GRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKR 471
+SLF R+ + K HLL QYRMHP IS FP+ FY+ ++D + +RK+ +
Sbjct: 1577 EQSLFVRMQN-NHPKDVHLLDTQYRMHPDISVFPSRTFYDGLLKDGPSMANLRKQPWHAS 1635
Query: 472 FLHGPMYGPYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIV 530
L PY F +V G +S N E+ V + + L + IGI+
Sbjct: 1636 SL----LAPYRFFDVAGQHSSAPRGNSLVNKAEIEVAIMLYTRLRTDFPTYDFTGKIGII 1691
Query: 531 SPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
Y AQ+ ++ SK+ ++ + D FQG E ++II S VR++ G+IGFL +
Sbjct: 1692 VTYKAQLREMKGTFISKFGPDIADYIEFNTTDAFQGRESEIIIFSCVRASPAGTIGFLQD 1751
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKA 646
+R+NV LTRA+ LW+LGNA TL+ + W+ LV DA R + + LG++
Sbjct: 1752 IRRMNVGLTRAKSSLWVLGNASTLSSGR-YWKKLVDDAKGRDNYTTGNLKSMLGQS 1806
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 772 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 830
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 831 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 890
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 891 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 947
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 948 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 1006
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 1007 YGVIIVGNPKALS-KQPLWNHLLN 1029
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 610 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 662
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 663 NIAVDQLTEKI 673
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 166/296 (56%), Gaps = 10/296 (3%)
Query: 341 LKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L A + ST S S +L S+++ + +VIDEAAQ E + IPL+ G V+ GD
Sbjct: 611 LNDAEVVCSTLSGSAHDVLASMSLT-FDTVVIDEAAQCTELSAIIPLRY-GCTKCVMVGD 668
Query: 399 ECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
QLP V S+ + + +SLF R+ + S +LL++QYRMHP IS FP+ FY +++
Sbjct: 669 PNQLPPTVLSQKAASYKYEQSLFVRIQNNHKXSVYLLNVQYRMHPEISMFPSKEFYHSRL 728
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF-IEHSCRNMVEVSVVMKILLNLYK 516
D + + + + +YGPY F +V G E+ S N E S+ ++++ +L++
Sbjct: 729 LDGPNMAENNSKP---WNSLYGPYRFFDVKGAEEQNEATKSVFNYTEASLALELVEDLFE 785
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ + +GI+SPY QV +++ +++ + ++DGFQG E+++I+ S
Sbjct: 786 KFSEINWAGLVGIISPYKEQVKLLKKLFINRFGRIITTQIDFNTVDGFQGQEKEVIVFSC 845
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
V + N IGFL++ +R+NVALTRAR LWILG+ L K+ W L+ +A R
Sbjct: 846 VXAENHTGIGFLADIRRMNVALTRARSSLWILGSKXALVNNKT-WRDLIENATERH 900
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 581 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLRQSLFERLISL 639
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P++S FP++ FYE +++ T+ +R+ P++G P F
Sbjct: 640 GHVPIRLEVQYRMNPNLSEFPSNMFYEGSLQNGVTIEQRTVSNSTFPWPIHGVPMMFWAN 699
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +I+ L+K D + IG+++PY Q I + +
Sbjct: 700 YG-REEISANGTSYLNRIEAMNCERIITRLFK---DGVKPEQIGVITPYEGQRAYILQYM 755
Query: 545 GSKYVNSAGFAVKV--MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
V VKV S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 756 QMNGVLDKNLYVKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 815
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L+R +W L+ + C
Sbjct: 816 YGLIILGNPRSLSRNL-LWNHLLIHFREKGCL 846
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LNDSQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 419 TKLNDSQSNAVKKVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 471
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 472 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 500
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 21/307 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K A+L GD QL ++ + + +A +SLFERL L
Sbjct: 631 VLIDESTQASEPECLIPI-VKGAKQAILVGDHQQLGPVILERKAADAGLKQSLFERLISL 689
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 690 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 749
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +I+ L++ + ++ IG+++PY Q I + +
Sbjct: 750 YG-REEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 805
Query: 545 ---GSK----YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
GS Y+N V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV
Sbjct: 806 QMNGSLDKDLYIN-----VEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVG 860
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDEL 657
LTRA++ L ILGN R+L R ++W L+ + C D + V+ + +
Sbjct: 861 LTRAKYGLVILGNPRSLAR-NTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQPRKT 919
Query: 658 DELLNPE 664
++ +NP+
Sbjct: 920 EQQINPQ 926
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 469 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 521
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 522 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 550
>gi|328770910|gb|EGF80951.1| hypothetical protein BATDEDRAFT_24512 [Batrachochytrium dendrobatidis
JAM81]
Length = 1938
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 156/268 (58%), Gaps = 7/268 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
+++DEA Q E IPL G + ++ GD QLP + S+V+ + + +SLF+RL
Sbjct: 1578 VIVDEACQAVELSCLIPL-CYGAQKCIMVGDPNQLPPTILSQVAQDYSYDQSLFQRLMKS 1636
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
S HLLSIQYRMHP IS FP+ FY + ++D+ + H ++ PY +N
Sbjct: 1637 CKDSIHLLSIQYRMHPHISLFPSLNFYNSALKDAPGLNTICSAPWHSHR-LFPPYLLLNA 1695
Query: 487 FGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+E+F S N E S+ + ++ + + D K IGI++ Y Q +++
Sbjct: 1696 VSGQEQFGSRKSLFNHEEASLCVGLVKTICTNFPDIKFFARIGIITFYKLQARKLRDMFV 1755
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS--NNGGSIGFLSNSKRVNVALTRARH 603
+ ++ +V + ++DGFQG E+D+I++S VR+ + S+GF+S+++R+NVALTRA+H
Sbjct: 1756 KHFGHAILNSVDINTVDGFQGQEKDIILLSCVRASKDTDRSVGFISDTRRMNVALTRAKH 1815
Query: 604 CLWILGNARTLTRKKSVWEALVHDANAR 631
L I+GN+ +L + VW+ LV++A R
Sbjct: 1816 SLIIIGNSHSL-KTDPVWKNLVNNAKQR 1842
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 145/277 (52%), Gaps = 13/277 (4%)
Query: 365 LNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFE 422
+NF +++DEA Q E E IPL + G K V GD QL ++ +K + A +SLFE
Sbjct: 642 INFRTVLVDEATQAAEPECMIPLVM-GCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFE 700
Query: 423 RLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PY 481
RL LG L IQYRMHP +S FP++ FYE +++ T ++R K P+ P
Sbjct: 701 RLIMLGNRPIRLEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKVDFPWPVPSLPM 760
Query: 482 SFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVA 539
F G +EE N E S V KI+ +KA + E IGIV+PY Q
Sbjct: 761 MFFQNLG-QEEISSSGTSFLNRTEASNVEKIVTRFFKAGV---EPWQIGIVTPYEGQRSY 816
Query: 540 I--QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
I +L V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVA
Sbjct: 817 IVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVA 876
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
LTRAR L ILGN + L K +W L+ + C
Sbjct: 877 LTRARFGLVILGNPKVLN-KHPLWHYLLVHYKEKGCL 912
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L K + LI GPPGTGKT T + ++ L +M LVC P+
Sbjct: 485 LNHSQVNAVKSVL-------KKPLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPS 537
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL---LGNNE 127
NVA+ +L ++ +K+V+ + + R+AL P+G + L + NN+
Sbjct: 538 NVAVDQLTEKIHATGLKVVRLTAK--SREALDSPIGFLTLHEQVANND 583
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 678 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 736
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 737 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 796
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 797 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 853
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 854 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 912
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 913 YGVIIVGNPKALS-KQPLWNHLLN 935
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 516 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 568
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 569 NIAVDQLTEKI 579
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 594 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 652
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 653 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 712
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 713 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 769
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 770 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 828
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 829 YGVIIVGNPKALS-KQPLWNHLLN 851
Score = 46.2 bits (108), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 432 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 484
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 485 NIAVDQLTEKI 495
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 148/270 (54%), Gaps = 22/270 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL K VL GD QL +V +K + +A +SLFERL L
Sbjct: 560 VLIDEATQASEPECMIPLT-HVYKQVVLVGDHQQLGPVVMNKKAAQAGLSQSLFERLIIL 618
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G S L++QYRMHP +S FP++ FYE +++ T +R R+L P P + +
Sbjct: 619 GNSPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVTTAERL--ARYLDFPWPQPEEPLMFY 676
Query: 488 G--GREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
G+EE S N E S KI+ +KA + ++ IGI++PY Q I
Sbjct: 677 ANFGQEEISASGTSYLNRTEASTCEKIVTQFFKAGVTPEQ---IGIITPYDGQRSYI--- 730
Query: 544 LGSKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+Y+ + G AV+V S+D FQG E+D II+S VRS+ IGFLS +R+NV
Sbjct: 731 --VQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLSEPRRLNV 788
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
ALTRAR+ + +LGN + L + + +VH
Sbjct: 789 ALTRARYGVIVLGNPKVLAKHALWYHFIVH 818
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 18/90 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFR---TLVC 83
LN SQ AV S L Q + LI GPPGTGKT T S++ + Q K LVC
Sbjct: 395 LNSSQVNAVRSVLTQ-------PLSLIQGPPGTGKTVTSASIVYHLATQTKGNGSAVLVC 447
Query: 84 TPTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ +LA RVV++ +S E
Sbjct: 448 APSNVAVDQLAEKIHQTGLRVVRVTAKSRE 477
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ L G K +L GD CQL ++ K + EA +SLFERL L
Sbjct: 514 VLIDESTQAAEPECLIPMVL-GAKQVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLL 572
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ + + +R P V
Sbjct: 573 GVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLAGVDFPWPNPDKPMMFWVQ 632
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G EE S N E + V K++ + + + IG+++PY Q VV++
Sbjct: 633 LGAEEISASSTSYLNRTEAAAVEKVVTRFLQNGMSPAQ---IGVITPYEGQRAHVVSVMV 689
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ G+ + ++V S+D FQG E+D+I++S VRSN SIGFLS+ +R+NVALTRAR
Sbjct: 690 RNGTARQDLYK-EIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRAR 748
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
L +LGN R L+R + +W +L+ C
Sbjct: 749 FGLVVLGNPRVLSR-QPLWNSLLQYFKEHGCL 779
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RT 80
PSL LN SQ AV S L+Q + LI GPPGTGKT T + ++ L +
Sbjct: 347 PSLPE-LNHSQLHAVKSVLQQ-------PLSLIQGPPGTGKTVTSAAIVYHLAHSGTGQV 398
Query: 81 LVCTPTNVAIKELAARV 97
LV P+NVA+ +LA ++
Sbjct: 399 LVAAPSNVAVDQLAHKM 415
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 149/267 (55%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 637 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ +R + F P F+ V
Sbjct: 696 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFL-VT 754
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE S N E S V KI KA + ++ IGI++PY Q +
Sbjct: 755 QGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 811
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L SK +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 812 YQGSLHSKLYQE----IEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALT 867
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L+ K+ +W L++
Sbjct: 868 RAKYGIIIVGNPKVLS-KQQLWNHLLN 893
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ LVC P+
Sbjct: 475 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVRLNGGPILVCAPS 527
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 528 NTAVDQLTEKI 538
>gi|429853279|gb|ELA28360.1| helicase sen1 [Colletotrichum gloeosporioides Nara gc5]
Length = 2051
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 156/279 (55%), Gaps = 16/279 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--S 425
++IDEAAQ E + IPL+ K +L GD QLP V S+ + + +SLF R+ +
Sbjct: 1577 VIIDEAAQCVELSALIPLKYGATK-CILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQRN 1635
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS---STVRKRSYEKRFLHGPMYGPYS 482
+ Y H+L QYRMHP IS FP+ FYE K+ D + +R++ + L GPY
Sbjct: 1636 FPNYI-HMLDRQYRMHPEISRFPSLEFYEGKLVDGDDMADLRRQPWHASAL----LGPYR 1690
Query: 483 FINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKL--SIGIVSPYSAQVVA 539
F +V G +E+ + S N E+ V M+ L ++A + + IGI++PY AQ+
Sbjct: 1691 FFDVEGSQEKGNKGRSLVNHAELRVAMQ-LYERFRADFGRQTDIRGKIGIITPYKAQLQE 1749
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
++ + G +Y + ++ + D FQG E ++II S VR++ G IGF+ + +R+NV LT
Sbjct: 1750 LRYQFGRQYGDGITDDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMQDIRRMNVGLT 1809
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
RA+ LWILG++R L + + W L+ +A R + D
Sbjct: 1810 RAKSSLWILGDSRALVQGE-FWNKLIENARQRALYTKGD 1847
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 38/142 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN QA+A+L LI GPPGTGKTKT+ ++ LL
Sbjct: 1328 LNPGQAKAILGA------KDNDGFTLIQGPPGTGKTKTIVAMVGSLLTGNIQPQGTAIKP 1381
Query: 75 ----------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLG 124
M + LVC P+N A+ EL R+ + VK F ++L LG
Sbjct: 1382 KIPAGQANQNAMPKKLLVCAPSNAAVDELVLRLKQGVKTMTGS-------FHKINVLRLG 1434
Query: 125 NNERLKVDSGVEEIYLDYRVKR 146
++ +++ V ++ LD VK+
Sbjct: 1435 RSD--AINAAVRDVTLDELVKQ 1454
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 9/269 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDEAAQ E + IPL+ + +L GD QLPA V S+ ++ + +SLF+RL
Sbjct: 528 VVIDEAAQAVEMATLIPLKYD-CRRCILVGDPNQLPATVISQAASSFLYAQSLFQRLQKA 586
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS---YEKRFLHGPMYGPYSFI 484
G+ +L +QYRMHP I FP+ +FY+N++ D + Y + + P + P+ F
Sbjct: 587 GHPVIMLDVQYRMHPLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPYHADPSFQPFLFY 646
Query: 485 NVFGGREEFIEHSCRNMVEVSVVMKIL-LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
++ G EE R V+ L L++ + G+++PY Q +Q
Sbjct: 647 DLCKGVEE---QGARGQSYVNPAEATFCLQLFQDLCSRFPHIESGVITPYKQQYFLLQRT 703
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
+ + A+ + +IDGFQG E+D+II S VR++ IGFLS+ +R+NVALTRA+
Sbjct: 704 FAAALDKATYSAIDINTIDGFQGREKDVIIFSCVRAHETKGIGFLSDIRRMNVALTRAKF 763
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQ 632
L+++G + L W ALV+ A +Q
Sbjct: 764 GLFVVGKSTALLNNPH-WGALVNHAKEKQ 791
Score = 41.6 bits (96), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 14/61 (22%)
Query: 53 LIWGPPGTGKTKTV-----SMLLVILLQMKFRT---------LVCTPTNVAIKELAARVV 98
L+ GPPGTGKTKT+ S L++ L +T LVC P+N A+ E+ R++
Sbjct: 295 LLQGPPGTGKTKTILGILSSSLIMSRLSQATQTDPNNKRNPVLVCAPSNAAVDEICMRLL 354
Query: 99 K 99
+
Sbjct: 355 E 355
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 609 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 667
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
L++QYRMHP +S FP++ FYE +++ T+ +R + P+ P F +
Sbjct: 668 NLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAETPMMFWSN 727
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + IG+++PY Q +V+ +
Sbjct: 728 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPSD---IGVITPYEGQRSYIVSTMQ 784
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 785 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 843
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GN + L+ K +W L+ R+C
Sbjct: 844 YGLVIIGNPKVLS-KHELWHHLLVHFKDRKCL 874
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 447 LNHSQITAIKTVL-------STPLSLIQGPPGTGKTVTSATIIYHLARMNNSQVLVCAPS 499
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 500 NVAVDQLCERIHRTGLKVVRLTAKSRE 526
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR-SYEKRFLHGPMYGPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ T R E F + P F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSN 704
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + K+ IGI++PY Q +V+ +
Sbjct: 705 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQRSYIVSSMQ 761
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 762 ATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 820
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R
Sbjct: 821 YGLVILGNPKVLS-KHPLWNCLLQHFKERHTL 851
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 424 LNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPS 476
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 477 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 531
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 822 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 880
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 881 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 940
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 941 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 997
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 998 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 1056
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 1057 YGVIIVGNPKALS-KQPLWNHLLN 1079
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 660 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 712
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 713 NIAVDQLTEKI 723
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 145/262 (55%), Gaps = 9/262 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE Q E E +P+ L G + +L GD CQL +V K + +A +SLFERL L
Sbjct: 614 ILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+ +FYE +++ + +R K P F V
Sbjct: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V K+ KA + ++ IGI++PY Q + + +
Sbjct: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQ 789
Query: 546 SKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
+ A ++V S+D FQG E+D+II+S VRSN IGFLS+ +R+NVALTRA++
Sbjct: 790 YQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKY 849
Query: 604 CLWILGNARTLTRKKSVWEALV 625
L ++GN + L+ K+ +W L+
Sbjct: 850 GLIVVGNPKVLS-KQPLWNHLL 870
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 451 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 504 NTAVDQLTEKI 514
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 175/340 (51%), Gaps = 15/340 (4%)
Query: 303 RRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLSTASSSYMLHS 359
R SE + L KL NE+ S+ ++ L L K+ L A + T +
Sbjct: 543 RMSEHNTELVKLSQLKNEVGELSSQDEKKLRQLTKAAEREILSNADVICCTCVGAGDPRL 602
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
M+ N L IDE+ Q E E IPL L G K VL GD QL ++ +K + +A RS
Sbjct: 603 SKMKFRNVL-IDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNRS 660
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL L + L QYRMHP +S FP++ FY+ +++ T +R + P+
Sbjct: 661 LFERLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTE 720
Query: 480 -PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
P F + G E S N E S V K + +KA + E IG+++PY Q
Sbjct: 721 MPMMFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVRPSE---IGVITPYEGQR 777
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V+ + G+ Y V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+
Sbjct: 778 SYIVSTMQNSGT-YKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRL 836
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
NVALTRA++ L ILGN + L+ K +W L+ R+CF
Sbjct: 837 NVALTRAKYGLVILGNPKVLS-KHELWHNLLAHFKDRKCF 875
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDH-KATIQ----LIWGPPGTGKTKTVSMLLVILLQM 76
P + TL + L L Q + D KA +Q LI GPPGTGKT T + ++ L +
Sbjct: 430 PPMKVTLPKKWSAPGLPDLNQGQVDAIKAVLQRPLSLIQGPPGTGKTVTSATIIYHLAKT 489
Query: 77 KF-RTLVCTPTNVAIKELAAR-------VVKLVKESVE 106
+ LVC P+NVA+ +L R VV+L +S E
Sbjct: 490 SGSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSRE 527
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 101 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 159
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 160 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 219
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 220 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 276
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 277 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 335
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 336 YGVIIVGNPKALS-KQPLWNHLLN 358
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 157/283 (55%), Gaps = 21/283 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 583 VLIDESTQASEPECLIPI-IKGAKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL 641
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++ P F
Sbjct: 642 GHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSASSFPWPIHEIPMMFWAN 701
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
FG REE + S N +E +I+ L+K D + IG+++PY Q I + +
Sbjct: 702 FG-REEISANGTSYLNRIEAMNCERIITKLFK---DGVKPEQIGVITPYEGQRAYILQYM 757
Query: 545 ---GSK----YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
GS Y+N V+V S+D FQG E+D II+S VR+N +IGFLS+ +R+NV
Sbjct: 758 QMNGSLDKELYIN-----VEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVG 812
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
LTRA++ L ILGN R+L+R S+W L+ + C D
Sbjct: 813 LTRAKYGLVILGNPRSLSR-NSLWNHLLIHFREKGCLVEGSLD 854
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCT 84
+ LN SQA AV + L++ + LI GPPGTGKT T + ++ L + K R LVC
Sbjct: 421 AQLNASQASAVANVLQK-------PLSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCA 473
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LA +VV+L +S E
Sbjct: 474 PSNVAVDHLATKLRDLGLKVVRLTAKSRE 502
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 606 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 664
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 665 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFFYVT 724
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 725 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 781
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRA+
Sbjct: 782 FSGSLHTKLYQ-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAK 840
Query: 603 HCLWILGNARTLTRKKSVWEALVHD 627
+ + I+GN + L+ K+ +W L+++
Sbjct: 841 YGVIIVGNPKALS-KQPLWNNLLNN 864
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-LQMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 444 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPS 496
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 497 NIAVDQLTEKIDK 509
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 152/273 (55%), Gaps = 16/273 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L+F ++IDE+ Q E E IPL + G + VL GD CQL ++ K + A +S
Sbjct: 66 LERLSFHSVLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQLGPVITCKKAASAGLTQS 124
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFER LG L +QYRMHP++S FP++ FYE +++ T R + F P
Sbjct: 125 LFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKTDF---PWPN 181
Query: 480 P--YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
P F G+EE + S N E + V KI+ + K + +IG+++PY
Sbjct: 182 PDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPN---TIGVITPYEG 238
Query: 536 QVVAIQEKLG-SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
Q + L S +N+ + +++ S+D FQG E+D II+S VR+N IGFL++ +R
Sbjct: 239 QRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRR 298
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
+NVALTRAR+ L ++GN + L K+ +W L+H
Sbjct: 299 LNVALTRARYGLIVVGNPKALC-KQPLWNQLLH 330
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + R P+ P F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 763
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 764 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 822
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 823 YGLVILGNPKVLS-KHPLWNCLLQHFKERHCL 853
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 426 LNGSQINAVKSVLQR-------PMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 478
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 479 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 533
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + R P+ P F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 763
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 764 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 822
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 823 YGLVILGNPKVLS-KHPLWNCLLQHFKERHCL 853
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 426 LNGSQINAVKSVLQR-------PMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 478
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 479 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 533
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 154/275 (56%), Gaps = 11/275 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 615 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
+ L++QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 674 NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVGDMPMMFWSN 733
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + IG+++PY Q +V+ +
Sbjct: 734 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPGD---IGVITPYEGQRSYIVSTMQ 790
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 791 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 849
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+ + I+GN + L+ K +W L+ R+C +
Sbjct: 850 YGVVIIGNPKVLS-KHELWHHLLVHFRDRKCLVDG 883
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 453 LNGSQISAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLAKMNNSQVLVCAPS 505
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 506 NVAVDQLCERV 516
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 148/267 (55%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 625 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 683
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ +R + F P F+ V
Sbjct: 684 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFL-VT 742
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE S N E S V KI KA + + IGI++PY Q +
Sbjct: 743 QGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPDQ---IGIITPYEGQRAYLVQYMQ 799
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L SK +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 800 YQGSLHSKLYQE----IEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALT 855
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L+ K+ +W L++
Sbjct: 856 RAKYGIIIVGNPKVLS-KQQLWNHLLN 881
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ LVC P+
Sbjct: 463 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVRLNGGPVLVCAPS 515
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 516 NTAVDQLTEKI 526
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 569 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ + R P+ P F +
Sbjct: 628 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 687
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 688 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 744
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 745 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R C
Sbjct: 804 YGLVILGNPKVLS-KHPLWNCLLQHFKERHCL 834
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 407 LNGSQINAVKSVLQR-------PMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 459
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 460 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 514
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 583 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 630
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 631 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 689
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 690 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 749
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 750 LNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 805
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 806 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 862
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 863 VLS-KQPLWNHLL 874
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 456 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 508
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 509 NTAVDQLTEKIHK 521
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 582 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 629
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 630 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 688
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 689 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 748
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 749 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 804
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 805 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 861
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 862 VLS-KQPLWNHLL 873
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 508 NTAVDQLTEKIHK 520
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 570 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 617
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 618 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 676
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 677 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 736
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 737 LNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 792
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 793 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 849
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 850 VLS-KQPLWNHLL 861
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 443 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 495
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 496 NTAVDQLTEKIHK 508
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 147/267 (55%), Gaps = 16/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFERL L
Sbjct: 601 VLIDESTQATEPEILVSI-VRGVRQLVLVGDHCQLGPVVICKKAAMAGLSQSLFERLVLL 659
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FY+ +++ T R + H P + +F
Sbjct: 660 GIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENDRYMKGVDWHWPTHNKPAFFWHC 719
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VVA 539
G EE N E + V K++ L K + + L IG+++PY Q +
Sbjct: 720 SGAEELSASGTSFLNRTEAANVEKLVSKLIKGGV---QPLQIGVITPYEGQRSFIVNYMH 776
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L SK S V++ S+D FQG E+D II++ VRSN+ IGFLS+ +R+NVA+T
Sbjct: 777 TQGTLNSKLYES----VEIASVDAFQGREKDYIIVTCVRSNDALGIGFLSDPRRLNVAIT 832
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + ++GNA+ L+R + +E + H
Sbjct: 833 RAKYGMVVVGNAKVLSRHELWYELINH 859
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ QAV L + + LI GPPGTGKT + ++ L+ + + LVC+P+
Sbjct: 440 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVKKTEGNVLVCSPS 492
Query: 87 NVAIKELAARVVK 99
N+A+ LA ++ K
Sbjct: 493 NIAVDHLAEKIHK 505
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 18/270 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N ++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL
Sbjct: 617 FNSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 675
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG L +QYRMHP +S FP+++FYE +++ +R + F P F+
Sbjct: 676 VALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFL 735
Query: 485 NVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------Q 536
V G+EE S N E S V KI KA I ++ IGI++PY Q
Sbjct: 736 -VTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQ 791
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+ Q L SK +++ S+D FQG E+D+II+S VR+N IGFL++ +R+NV
Sbjct: 792 YMQYQGSLHSKLYQE----IEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNV 847
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
ALTRA++ + I+GN + L+ K+ +W L++
Sbjct: 848 ALTRAKYGIIIVGNPKVLS-KQELWNHLLN 876
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L ++ LVC P+
Sbjct: 458 LNRSQVYAVRHALQR-------PLSLIQGPPGTGKTVTSATIVYQLAKLNSGPILVCAPS 510
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 511 NTAVDQLTEKI 521
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 615 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 674 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFFYVT 733
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 734 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 790
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRA+
Sbjct: 791 FSGSLHTKLYQ-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAK 849
Query: 603 HCLWILGNARTLTRKKSVWEALVHD 627
+ + I+GN + L+ K+ +W L+++
Sbjct: 850 YGVIIVGNPKALS-KQPLWNNLLNN 873
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-LQMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 453 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPS 505
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 506 NIAVDQLTEKIDK 518
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 583 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 630
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 631 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 689
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 690 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 749
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 750 LNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 805
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 806 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 862
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 863 VLS-KQPLWNHLL 874
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 456 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 508
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 509 NTAVDQLTEKIHK 521
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 156/268 (58%), Gaps = 21/268 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K VL GD QL ++ + + +A +SLFERL L
Sbjct: 575 VLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAADAGLKQSLFERLISL 633
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +RS P++ P F +
Sbjct: 634 GHIPIRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRSVTNSTFPWPIHDLPMMFWSN 693
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
+G REE + S N +E +++ L+K D + IG+++PY Q +V
Sbjct: 694 YG-REEISGNGTSYLNRIEAMNCERVITKLFK---DGVKPDQIGVITPYEGQRAYIVQYM 749
Query: 542 EKLGSK----YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
+ GS Y+N V+V S+D FQG E+D II+S VR+N +IGFLS+ +R+NVA
Sbjct: 750 QMNGSMDKELYMN-----VEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVA 804
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALV 625
LTR+++ L ILGN R+L+R S+W L+
Sbjct: 805 LTRSKYGLVILGNPRSLSR-NSLWSHLL 831
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQA A+ L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 413 TQLNVSQANAIRHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKERILVCA 465
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 466 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 494
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 58 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 116
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 117 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 176
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 177 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 233
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 234 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 292
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ + I+GN + L+ K+ +W L+
Sbjct: 293 YGVIIVGNPKALS-KQPLWNHLL 314
>gi|195325897|ref|XP_002029667.1| GM24969 [Drosophila sechellia]
gi|194118610|gb|EDW40653.1| GM24969 [Drosophila sechellia]
Length = 1405
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 192/369 (52%), Gaps = 47/369 (12%)
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
YLL K H +KLQ N+L+ P +++ E + C+ RA++ +T SS L
Sbjct: 1055 YLLQK----LHQKEKKLQLISNQLS-PPLTQREEFE--ISQMCVTRANIICTTLSSCVKL 1107
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+ ++ + ++DEA Q E + +P++ G+ H VL GD QLPA+V SK + +
Sbjct: 1108 ANY-IDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLS 1165
Query: 418 RSLFERL------------SY-LGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTV 463
SLF+R+ SY L ++K LS+QYRMHP I +PN YFYE+++ ++
Sbjct: 1166 NSLFDRIQRSLQTQLDKPGSYQLTHTKLFKLSMQYRMHPEICQWPNKYFYEDQLINAECT 1225
Query: 464 RKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDS 521
RF + PY IN+ R+ S N E V K+L + K
Sbjct: 1226 ------ARF--ASPFIPYCVINLKYTRDSNGAQNKSISNNEEAGFVAKLLTEMDKHM--P 1275
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
++ S GI+SPY Q A+ + + S ++N + ++D +QG E+D+IIIS R+
Sbjct: 1276 SKRFSYGIISPYQNQCYALSQVIPS-HMN-----ITPQTVDSYQGLEKDVIIISNARTR- 1328
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD- 640
GFL+N +R+NVALTR R CL I GN L + +W L+ DA R+ +FN D D
Sbjct: 1329 --GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KSVEMWRNLLDDARKRKVYFNLDRDD 1385
Query: 641 -KDLGKAIL 648
DL ++++
Sbjct: 1386 VNDLERSLI 1394
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LN+ Q VL +++ D + ++ LI GPPGTGK+K +S L + + + + L
Sbjct: 901 LNEHQESIVLQIYQRIIDDIQPSLTLIQGPPGTGKSKVISELCLQTMYGNAAKTLDRKIL 960
Query: 82 VCTPTNVAIKELAA 95
+C +N A+ +
Sbjct: 961 ICAHSNTAVDHIVG 974
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 140/251 (55%), Gaps = 6/251 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E +PL ++G K VL GD CQL ++ K + A G+SLFERL L
Sbjct: 951 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1009
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSFINV 486
G + L +QYRMHP++S FP+ FY+ +++ T+++R Y K F P F N
Sbjct: 1010 GITPFRLEVQYRMHPALSEFPSYVFYDGSLQNGITLKEREYPLKSFPWPNAKCPMFFYNS 1069
Query: 487 FGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E S + K++ L + + + IG+++PY Q I
Sbjct: 1070 TGLEEMSASGTSYLNRSEASNMEKLVRTLLQCGLKPSQ---IGVITPYEGQRAYITSLFQ 1126
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA++ L
Sbjct: 1127 KNISFQNSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGL 1186
Query: 606 WILGNARTLTR 616
I GNA+ L+R
Sbjct: 1187 IICGNAKVLSR 1197
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-R 79
P+L+ LN SQ A+ L + + LI GPPGTGKT T + L+ L++M +
Sbjct: 781 APNLA-PLNHSQIDAIKRSLL-------SPLSLIQGPPGTGKTLTCATLVYHLVKMNMGK 832
Query: 80 TLVCTPTNVAIKELAARV 97
LV P+NVA+ +L+ R+
Sbjct: 833 VLVTAPSNVAVDQLSVRI 850
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 582 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 629
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 630 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 688
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 689 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 748
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 749 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 804
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 805 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 861
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 862 VLS-KQPLWNHLL 873
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 508 NTAVDQLTEKIHK 520
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 569 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 616
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 617 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 675
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 676 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 735
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 736 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 791
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 792 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 848
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 849 VLS-KQPLWNHLL 860
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 495 NTAVDQLTEKIHK 507
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 162/302 (53%), Gaps = 11/302 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTIPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
+ L ILGN R+L R ++W L+ + C D + V+ + + ++ LN
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQPKKSEQPLN 862
Query: 663 PE 664
P+
Sbjct: 863 PQ 864
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ + R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHRDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 571 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 618
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 619 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 677
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 678 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 737
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 738 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 793
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 794 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 850
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 851 VLS-KQPLWNHLL 862
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 444 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 496
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 497 NTAVDQLTEKIHK 509
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 571 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 618
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 619 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 677
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 678 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 737
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 738 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 793
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 794 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 850
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 851 VLS-KQPLWNHLL 862
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 444 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 496
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 497 NTAVDQLTEKIHK 509
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS-STVRKRSYEKRFLHGPMYGPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ S + + + F + P F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + ++ IGI++PY Q +V+ +
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVHPQD---IGIITPYEGQRSYIVSSMQ 763
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D II+S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 764 ANGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 822
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 823 YGLVILGNPKVLS-KHPLWNCLLQHFKEQHCL 853
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 426 LNGSQINAVKSVLQR-------PMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 478
Query: 87 NVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
NVA+ +L R+ L V R+ + P+G L L RL DS +E I L+
Sbjct: 479 NVAVDQLCERIHRTGLKTVRVTAKSREDVESPVG-FLSLHEQVRLN-DSNIELIKLN 533
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 569 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 616
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 617 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 675
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 676 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 735
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 736 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 791
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 792 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 848
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 849 VLS-KQPLWNHLL 860
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 495 NTAVDQLTEKIHK 507
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 569 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 616
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 617 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 675
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 676 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 735
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 736 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 791
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 792 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 848
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 849 VLS-KQPLWNHLL 860
Score = 45.4 bits (106), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 495 NTAVDQLTEKIHK 507
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 145/264 (54%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPAVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFDFQWPQPDKPMFFYVT 730
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 731 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 787
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 788 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 846
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 847 YGVIIVGNPKALS-KQPLWNHLLN 869
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 21/109 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 450 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 502
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
N+A+ +L +VV+L +S R+A+ P+ L L N R
Sbjct: 503 NIAVDQLTEKIHQTGLKVVRLCAKS-----REAIDSPV-SFLALHNQTR 545
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 614 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 673 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVT 732
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 733 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 789
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRA+
Sbjct: 790 FSGSLHTKLYQ-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAK 848
Query: 603 HCLWILGNARTLTRKKSVWEALVHD 627
+ + I+GN + L+ K+ +W L+++
Sbjct: 849 YGVIIVGNPKALS-KQPLWNNLLNN 872
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-LQMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 452 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPS 504
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 505 NIAVDQLTEKIDK 517
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 181/363 (49%), Gaps = 51/363 (14%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELN---------LPSAVEKDLLE--DLLKSFCLKRA 344
+++L +SE H L++L+ EL+ L A E+++L+ D++ C+
Sbjct: 598 VRHLDTSEKSEMH-KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAG 656
Query: 345 SLFLSTASSSYMLHSVAMEPLNF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
LS NF ++IDE+ Q E E IPL L G+K VL GD C
Sbjct: 657 DPRLS----------------NFRFRQVLIDESTQATEPECLIPLVL-GVKQVVLVGDHC 699
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QL ++ K + A +SLFERL LG L +QYRMHP +S FP++ FYE +++
Sbjct: 700 QLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNG 759
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAW 518
TV +R P+ F V G EE S N E + V KI+ ++
Sbjct: 760 VTVNERQSTGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSG 819
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF-------AVKVMSIDGFQGGEEDL 571
+ + IG+++PY Q I Y++ G ++V S+D FQG E+D
Sbjct: 820 VVPSQ---IGVITPYEGQRAYI-----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDY 871
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
II+S VRSN IGFL++ +R+NVALTRAR+ + +LGN + L+ K+ +W +L+
Sbjct: 872 IILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVLS-KQPLWNSLLTHYKEH 930
Query: 632 QCF 634
+C
Sbjct: 931 ECL 933
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T + ++ + Q +
Sbjct: 496 FGAPGLPELNASQVLAVKSVLQK-------PVSLIQGPPGTGKTVTSAAIVYHMAKQGQG 548
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA ++ + V R C + R V S VE +
Sbjct: 549 QVLVCAPSNVAVDQLAEKISSTGLKVV-RLCAKS---------------REAVSSPVEHL 592
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 593 TLHYQVRHL 601
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 427 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 474
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 475 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 533
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 534 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 593
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 594 LNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 649
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 650 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 706
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 707 VLS-KQPLWNHLL 718
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 300 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 352
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 353 NTAVDQLTEKIHK 365
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 582 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 629
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 630 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 688
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 689 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 748
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 749 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 804
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 805 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 861
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 862 VLS-KQPLWNHLL 873
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 508 NTAVDQLTEKIHK 520
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 31/313 (9%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A EK+LLE D++ C+ + LH + + ++IDE+ Q E E
Sbjct: 582 LKKAAEKELLEAADVICCTCV---------GAGDPRLHRLK---FHSILIDESMQATEPE 629
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 630 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 688
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HP +S FP+++FYE +++ +R K P F V G+EE S
Sbjct: 689 HPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSY 748
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNSA 552
N E S V KI + + ++ IG+++PY Q + Q L SK
Sbjct: 749 LNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQYQGSLHSKLYQE- 804
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 805 ---IEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 861
Query: 613 TLTRKKSVWEALV 625
L+ K+ +W L+
Sbjct: 862 VLS-KQPLWNHLL 873
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV +++ + LI GPPGTGKT T + ++ L+ Q LVC P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 87 NVAIKELAARVVK 99
N A+ +L ++ K
Sbjct: 508 NTAVDQLTEKIHK 520
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 171/341 (50%), Gaps = 35/341 (10%)
Query: 303 RRSECHFVLRKLQSSFNELN------------LPSAVEKDLLE--DLLKSFCLKRASLFL 348
R E H L KLQ +E L A E++LLE D++ C+ L
Sbjct: 548 RNMEGHSELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVICCTCVGAGDPRL 607
Query: 349 STASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
+ + HS+ +IDE+ Q E E +P+ L G K +L GD CQL +V
Sbjct: 608 A----RFKFHSI--------LIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMC 654
Query: 409 KVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
K + A +SLFERL LG L +QYRMHP +S FP+++FYE +++ +R
Sbjct: 655 KKAARAGLSQSLFERLVVLGIRPLRLEVQYRMHPQLSKFPSNFFYEGSLQNGVFADERRM 714
Query: 469 EKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
+ P G+EE S N E ++V KI ++ + ++
Sbjct: 715 KGVDFPWPQPDKPMLFYACQGQEEMAGSGTSYLNRTEAALVEKIATRFLRSAVKPQQ--- 771
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
IGI++PY Q + + + + A ++V S+D FQG E+DLI++S VRSN
Sbjct: 772 IGIITPYEGQRAYLVQHMQFQGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQG 831
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
IGFL++ +R+NVALTRAR+ + I+GN + L+ K+ +W L+
Sbjct: 832 IGFLNDPRRLNVALTRARYGIIIVGNPKVLS-KQPLWNHLL 871
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T ++ L+ Q LVC P+
Sbjct: 451 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSGTIVYHLVKQSNGPVLVCAPS 503
Query: 87 NVAIKELAARVVKL-VKESVERDC---RDALFFPLGDILLLGNNER 128
N+A+ +L ++ + +K V R C R+A+ P+ L L N R
Sbjct: 504 NIAVDQLTEKIHQTSLKAGVVRLCAKSREAINSPV-SFLALHNQIR 548
>gi|195588629|ref|XP_002084060.1| GD13018 [Drosophila simulans]
gi|194196069|gb|EDX09645.1| GD13018 [Drosophila simulans]
Length = 1408
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 49/370 (13%)
Query: 298 YLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYML 357
YLL + H +KLQ N+L+ P +++ E + C+ RA++ +T SS L
Sbjct: 1058 YLLQ----QLHQKEKKLQLISNQLS-PPLTQREEFE--ISQMCVTRANIICTTLSSCVKL 1110
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+ ++ + ++DEA Q E + +P++ G+ H VL GD QLPA+V SK + +
Sbjct: 1111 ANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLS 1168
Query: 418 RSLFERL------------SY-LGYSKHL-LSIQYRMHPSISCFPNSYFYENK-IRDSST 462
S+F+R+ SY L ++K LS+QYRMHP I +PN YFYE++ I ST
Sbjct: 1169 NSMFDRIQRSLQTQLDKPGSYQLTHTKLFKLSMQYRMHPEICRWPNKYFYEDQLINAEST 1228
Query: 463 VRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWID 520
R + F+ PY IN+ R+ S N E + V K+L + K
Sbjct: 1229 AR---FASPFI------PYCVINLKYTRDSNGAQNKSISNNEEAAFVAKLLTEMDKHM-- 1277
Query: 521 SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN 580
++ S GI+SPY Q A+ + + S + ++D +QG E+D+IIIS R+
Sbjct: 1278 PSKRFSYGIISPYQNQCYALSQVIPSH------MNITPQTVDSYQGLEKDVIIISNARTR 1331
Query: 581 NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
GFL+N +R+NVALTR R CL I GN L + +W L+ DA R+ +FN D D
Sbjct: 1332 ---GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KSVEMWRNLLDDARKRKVYFNLDRD 1387
Query: 641 --KDLGKAIL 648
DL ++++
Sbjct: 1388 NVNDLERSLI 1397
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LN+ Q VL +++ D + ++ LI GPPGTGK+K +S L + + + + L
Sbjct: 904 LNEHQESIVLQTYQRIIDDIQPSLTLIQGPPGTGKSKVISELCLQTMYGNAAKTLDRKIL 963
Query: 82 VCTPTNVAIKELAA 95
+C +N A+ +
Sbjct: 964 ICAHSNTAVDHIVG 977
>gi|170047299|ref|XP_001851165.1| helicase sen1 [Culex quinquefasciatus]
gi|167869746|gb|EDS33129.1| helicase sen1 [Culex quinquefasciatus]
Length = 682
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 192/390 (49%), Gaps = 31/390 (7%)
Query: 262 SFETLLFEDNLVSEELEELLSHSVDEG-LSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE 320
SFET E + +L+ L + + G L+++ + + + K R + R L + +
Sbjct: 297 SFETFYLERETLERKLKTLENRTTQNGKLAQNSIMLDEIT-KLRDRLEVIKRVLPDNVDN 355
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKE 378
++L E+ +E K + +A + +T S L + L F +IDEA Q E
Sbjct: 356 MDLQDK-ERWGMESRAKKQLISKADIICTTLGSCGGLFDY-YQSLKFDVCIIDEATQCTE 413
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--SYLGYSKH---L 433
S PLQ GIK +L GD QLP V S+ EA SLF R+ S++G + +
Sbjct: 414 ISSFTPLQY-GIKKLILVGDVKQLPPFVFSRECAEAGLKNSLFARIQQSFVGTNLEGVKM 472
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV-FGGREE 492
L+ QYRMHP I +PN YFYE K++ + K G + PY+ + +
Sbjct: 473 LTTQYRMHPEIVKWPNEYFYEGKLKSNPDATK-------CDGFPFKPYTVFGLEYSQNMT 525
Query: 493 FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSA 552
H N E+ V+K+L + + +I I++PY+ I++ L +K +
Sbjct: 526 QSAHQIYNHEEIEFVLKLLTEIMQC---CHRHTTIAIITPYTRHKREIEKFLAAKKITQ- 581
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
V V+SID QG E D++IIS RS GFL + +R+NVALTRAR CL + GN
Sbjct: 582 ---VSVLSIDSVQGQEYDVVIISLARS---VGTGFLGSPQRLNVALTRARKCLILCGNFA 635
Query: 613 TLTRKKSVWEALVHDANARQCFFN-ADDDK 641
L +W +L+ DA R+ +++ ADDD+
Sbjct: 636 DLKDNNQMWSSLLQDAEQRKLYYHIADDDE 665
Score = 45.1 bits (105), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ------MKFRTL 81
LN Q +LS ++ I LI GPPGTGK++ +S L++ L + + + L
Sbjct: 166 LNREQGDILLSVFGHCLDANRPHIMLIQGPPGTGKSRLISNLVLQLHRGVPNASRRMKIL 225
Query: 82 VCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
+C +N AI + +++KL + + +D + G++L G KV++ + ++LD
Sbjct: 226 ICAQSNTAIDVIVLKLIKLFR-LLSKDEQ-------GNMLRTGTAN--KVNAECKMVFLD 275
Query: 142 YRVKR 146
+R
Sbjct: 276 ALARR 280
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 179/358 (50%), Gaps = 36/358 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 604 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 662
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ ++ +R P+ P F +
Sbjct: 663 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSN 722
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 723 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSD---IGIITPYEGQRSYVVSSMQ 779
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 780 ATGT-FKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 838
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
+ + ILGN + L+ K +W L+ R+C V+ L L E L
Sbjct: 839 YGVVILGNPKVLS-KHPLWNYLLLHFKERKCL---------------VEGPLSNLQESLV 882
Query: 663 PESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKRNVDSVCG 720
SR ++ R F + + S+ + NG RP+ + SV G
Sbjct: 883 QFSRPKQAYRGPQRFHMAYNHA----------SSMASGMSNGRNGGRPEYHDTGSVVG 930
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 442 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 494
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 495 NVAVDQLCERI 505
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 148/270 (54%), Gaps = 18/270 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N ++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL
Sbjct: 619 FNSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 677
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG L +QYRMHP +S FP+++FYE +++ +R + F P F+
Sbjct: 678 VALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFL 737
Query: 485 NVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------Q 536
V G+EE S N E S V KI KA I + IGI++PY Q
Sbjct: 738 -VTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPDQ---IGIITPYEGQRAYLVQ 793
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+ Q L SK +++ S+D FQG E+D+II+S VR+N IGFL++ +R+NV
Sbjct: 794 YMQYQGSLHSKLYQE----IEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNV 849
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
ALTRA++ + I+GN + L K+ +W L++
Sbjct: 850 ALTRAKYGIIIVGNPKVLA-KQELWNHLLN 878
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L ++ LVC P+
Sbjct: 460 LNRSQVYAVRHALQR-------PLSLIQGPPGTGKTVTSATIVYQLARLNSGPILVCAPS 512
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 513 NTAVDQLTEKI 523
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A RSLFERL L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLINL 668
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
+ L QYRMHP +S FP++ FY+ +++ T +R + P+ P F +
Sbjct: 669 KINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPMMFWSN 728
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + E IG+++PY Q +V+ +
Sbjct: 729 IGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQRSYIVSTMQ 785
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ Y V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 786 NSGT-YKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 844
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 845 YGLVILGNPKVLS-KHELWHNLLAHFKDRKCF 875
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN Q A+ + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 448 LNQGQVDAIRAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGSQVLVCAPS 500
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 501 NVAVDQLCERV 511
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 177/340 (52%), Gaps = 32/340 (9%)
Query: 321 LNLPSAVEKDLLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKE 378
L L AV K LE LL ++ + + +T ++ S LH VA P+ FL DEA+ E
Sbjct: 557 LGLRGAVFK--LERLLMQEIVEDSDVVCTTCISAGSAALH-VADFPIVFL--DEASMSTE 611
Query: 379 SESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSKHLLSIQ 437
S IPL + G +H L GD QLP ++ S + GRSLFERL+ G +L +Q
Sbjct: 612 PASLIPL-MRGCEHVALIGDHKQLPPVITSDEAERGGLGRSLFERLTEEGEVPSIMLDVQ 670
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRK-------RSYEKRFLHGPMYGPYSFINVFGGR 490
YRMHP +S FP S FY + D + R RFL F++ G
Sbjct: 671 YRMHPDLSRFPASEFYGRSLLDGTVSAHGEVAPALRPPASRFLQ--RGAGVVFLDHRHG- 727
Query: 491 EEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS---K 547
E + S N+ E +V ++ +L D + IG+++PY+AQ+ ++ LG +
Sbjct: 728 EARRDRSRVNVGEARLVCDVVEDLLLQNEDLVGR-EIGVIAPYAAQISLLERVLGENRER 786
Query: 548 YVNSAGF--------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
+V++ G A++V ++DGF+G E+++II STVR+N G IGFL++ +R+NV LT
Sbjct: 787 WVDALGSERRADEVEAIEVKTVDGFEGREKEVIIFSTVRNNGAGQIGFLADRRRLNVGLT 846
Query: 600 RARHCLWILGNARTL-TRKKSVWEALVHDANARQCFFNAD 638
RA+ L++ G+ RTL T K VW V AR D
Sbjct: 847 RAKRGLFVAGSVRTLGTEKSGVWARYVEYLRARSLVVRLD 886
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCT 84
LN +Q +A+ L + + L+ GPPGTGKTKT+ + +L + + LVCT
Sbjct: 418 LNSTQVRAIALML-------ASRVSLVQGPPGTGKTKTIVETIRLLKRHFHVPYPILVCT 470
Query: 85 PTNVAIKEL 93
TN+A+ L
Sbjct: 471 YTNIAVDNL 479
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 604 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 662
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G S L++QYRMHP +S FP++ FYE +++ ++ +R P+ P F +
Sbjct: 663 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSN 722
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IGI++PY Q VV+ +
Sbjct: 723 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---QPSGIGIITPYEGQRSYVVSSMQ 779
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 780 ATGT-FKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 838
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ + ILGN + L+ K +W L+ R+C
Sbjct: 839 YGVVILGNPKVLS-KHPLWNYLLLHFKERKCL 869
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 442 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 494
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 495 NVAVDQLCERI 505
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 151/273 (55%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G + L +QYRMHP +S FP++ FYE +++ T R ++ P+ P F +
Sbjct: 659 GCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTRESRMRKEVDFPWPVGDSPMMFWSN 718
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ----VVAIQ 541
G E S N E + V KI+ +KA + ++ IGI++PY Q V ++Q
Sbjct: 719 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPQD---IGIITPYEGQRSYVVQSMQ 775
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
K N ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA
Sbjct: 776 ANGTFKKENYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 833
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
++ L ILGN + L+ K +W L+ R C
Sbjct: 834 KYGLVILGNPKVLS-KHPLWHYLLLHFKERNCL 865
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 438 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPS 490
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 491 NVAVDQLCERI 501
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G + L +QYRMHP +S FP++ FYE +++ T+++R + P+ P F +
Sbjct: 673 GCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLRKDVDFPWPVADSPMMFWSN 732
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E V KI+ +KA + +IGI++PY Q VV +
Sbjct: 733 LGNEEISASGTSYLNRTEAQNVEKIVTRFFKAGVSPS---AIGIITPYEGQRSYVVQSMQ 789
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 790 QTGT-FKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 848
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ ILGN + L+ K +W L+ R C
Sbjct: 849 YGCVILGNPKVLS-KHPLWHYLLLHFKERNCL 879
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 452 LNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKMNGGQVLVCAPS 504
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 505 NVAVDQLCERI 515
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 146/276 (52%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K V GD CQL ++ K + A +SLFERL L
Sbjct: 648 VLIDESTQATEPECLIPLVL-GAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 706
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ TV +R P+ F V
Sbjct: 707 GVKPIRLQVQYRMHPCLSEFPSNNFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQ 766
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ ++ + + IG+++PY Q I
Sbjct: 767 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 818
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ G ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVAL
Sbjct: 819 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 878
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L+ K+ +W +L+ +C
Sbjct: 879 TRARYGIVILGNPKVLS-KQPLWNSLLTHYKEHECL 913
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV + L++ I LI GPPGTGKT T + ++ + Q +
Sbjct: 476 FGAPGLPELNASQVLAVKNVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQG 528
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 529 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 572
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 573 TLHYQVRHL 581
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 605 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 663
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 664 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 723
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + SIGI++PY Q VV+ +
Sbjct: 724 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---SIGIITPYEGQRSYVVSSMQ 780
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 781 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 839
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 840 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 870
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 443 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPS 495
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 496 NVAVDQLCERI 506
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 176/340 (51%), Gaps = 34/340 (10%)
Query: 311 LRKLQSSFNELN---------LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHS 359
L +L+S EL+ L A E+D+L D++ C+ LS
Sbjct: 555 LAQLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRLSK--------- 605
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
M+ N L IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +S
Sbjct: 606 --MKFRNVL-IDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
LFERL L L+IQYRMHP +S FP++ FY+ +++ T R+R P+
Sbjct: 662 LFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLRRDVDFPWPVAD 721
Query: 480 -PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
P F + G E S N E S V K++ +KA + + IG+++PY Q
Sbjct: 722 MPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPGD---IGVITPYEGQR 778
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V+ + G+ + + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+
Sbjct: 779 SYIVSTMQNTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRL 837
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
NVALTRA++ L I+GN + L+ K +W L+ R+C
Sbjct: 838 NVALTRAKYGLVIIGNPKVLS-KHELWHHLLVHFKERKCL 876
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 449 LNTSQIAAIKAVL-------STPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPS 501
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 502 NVAVDQLCERIHRTGLKVVRLTAKSRE 528
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 181/350 (51%), Gaps = 37/350 (10%)
Query: 311 LRKLQSSFNELN------------LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYM 356
LRKLQ +EL L S+ E+++L+ D++ + C+ LS + +
Sbjct: 609 LRKLQLLKDELGELVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRF- 667
Query: 357 LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
++IDEA Q E+E IP+ + G K VL GD CQL +V K S++A
Sbjct: 668 ---------RQVLIDEATQAMEAECLIPIVM-GAKQLVLVGDHCQLGPVVLCKKSSKAGL 717
Query: 417 GRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP 476
+SLFERL LG L +QYRMHP +S +P++ FYE +++ T +R ++ P
Sbjct: 718 TQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWP 777
Query: 477 MYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ F + G EE S N E + V K + + + + IG+V+PY
Sbjct: 778 VPSKPMFFLMTTGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQ---IGVVTPYE 834
Query: 535 AQ---VVAIQEKLGSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
Q +V ++ GS + S+ ++ ++V S+D FQG E+DLI+++ VRSN IGFLS+
Sbjct: 835 GQRSYLVDHLQRTGS--LRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSD 892
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+R+NVALTRAR I+GN R L K +W ALV+ +C D
Sbjct: 893 PRRLNVALTRARFGCIIIGNPRILA-KNPLWNALVNFYKDHECLVEGPLD 941
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + L+ L + + LVC P+
Sbjct: 504 LNHSQFTAVKAVLQR-------PLSLIQGPPGTGKTVTSATLVYHLARQGMGQVLVCAPS 556
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ L A RVV+L +S E
Sbjct: 557 NVAVDHLTAKISATGLRVVRLCAKSRE 583
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 659 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 718
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + SIGI++PY Q VV+ +
Sbjct: 719 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---SIGIITPYEGQRSYVVSSMQ 775
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 776 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 834
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 835 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 865
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 438 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPS 490
Query: 87 NVAIKELAARVVK--LVKESVERDCRDALFFPLG 118
NVA+ +L R+ K L V R+ + P+G
Sbjct: 491 NVAVDQLCERIHKTGLKTVRVTAKSREDVESPVG 524
>gi|162606520|ref|XP_001713290.1| hypothetical protein GTHECHR2082 [Guillardia theta]
gi|12580756|emb|CAC27074.1| sen1 [Guillardia theta]
Length = 692
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 184/375 (49%), Gaps = 36/375 (9%)
Query: 284 SVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNE---------LNLPSAVEKDL--- 331
++DE LS+ + GI YL + L +L ++N+ L+L + D
Sbjct: 286 AIDENLSRMLFGIPYLYQNNLNNPR--LLRLGPNYNKYLDHISFETLSLIKLSDIDFENK 343
Query: 332 -------LEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIP 384
+ +L +S + +F + A S+Y L + + +L+IDEAAQ E S IP
Sbjct: 344 FKFSNFNIINLKRSIINTGSLIFTTLACSNYHLIN-NLTSKQYLIIDEAAQSIELSSLIP 402
Query: 385 LQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSI 444
++ +L GD QLPA V SK + + RSL +R Y L IQYRMHP I
Sbjct: 403 IK-KYTHRIILVGDIHQLPATVFSKSAIAFGYNRSLLKRFQLNRYPTLFLGIQYRMHPQI 461
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEV 504
S FP FY+N ++DS V K S F + P F ++ G E + H+ +
Sbjct: 462 SSFPARKFYKNNLKDSWKVSKIS---NFHQLRCFSPLIFFDIIDGVENY--HTDNHFSWC 516
Query: 505 SVVMKILLNLY----KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560
++ +NLY I + +L+IG +S YS Q+ +++ L + + ++ +
Sbjct: 517 NLDEIRFINLYFRSIICLISNLNELTIGFISGYSGQIEEMRDILSNSKI---KLNEQIST 573
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
ID FQG E+D++ S VRS IGFL++ +R+NVA TRA+ WI GN+ +L RK S
Sbjct: 574 IDSFQGKEKDILFFSCVRSKIERGIGFLADGRRINVAFTRAKLGFWIFGNSFSL-RKDSN 632
Query: 621 WEALVHDANARQCFF 635
W V D R +F
Sbjct: 633 WNETVFDFKIRNNYF 647
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 20/79 (25%)
Query: 37 LSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR----------------- 79
LSC++ + +H I LI GPPGTGKT+T+ +L IL + K +
Sbjct: 220 LSCIKDFQNNH---ITLIQGPPGTGKTRTILGILAILFEEKKKYGIKLKISVDKKKQNDQ 276
Query: 80 TLVCTPTNVAIKELAARVV 98
++C P+N AI E +R++
Sbjct: 277 VIICAPSNAAIDENLSRML 295
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 145/276 (52%), Gaps = 19/276 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE Q E E IP+ + G K VL GD CQL +V K + +A +SLFER+ L
Sbjct: 631 VLVDECTQATEPECLIPIAM-GAKQLVLVGDHCQLGPVVMCKKAAKAGLQQSLFERMVNL 689
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R P+ +
Sbjct: 690 GVKPVRLQVQYRMHPILSEFPSNTFYEGTLQNGVTHAERHAHAIDFPWPVASKPMMFYIS 749
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G EE S N E S V KI+ K + ++ IGI++PY Q I
Sbjct: 750 TGAEELSASGTSYLNRTEASNVEKIVTRFLKGGVVPEQ---IGIITPYEGQRAYI----- 801
Query: 546 SKYVNSAGFAVK-------VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
+Y++ G K V S+D FQG E+D II+S VRSN G SIGF++N +R+NVAL
Sbjct: 802 VQYMSRNGSLRKQLYNELEVASVDAFQGREKDFIILSCVRSNEGKSIGFVNNPRRLNVAL 861
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
TRAR+ + ILGN + L K+ +W L+ +C
Sbjct: 862 TRARYGVVILGNPKVLA-KQPLWNNLLCHFKQHECL 896
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 24/121 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L+Q + +I GPPGTGKT T + ++ L +M + LV P+
Sbjct: 467 LNHSQVFAVKSVLQQ-------PLSVIQGPPGTGKTVTSACIVYHLSRMGHGQVLVTAPS 519
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
NVA+ L ++ K + V R C + R + S VE++ L Y+V+
Sbjct: 520 NVAVDHLTEKIHKTGLKVV-RMCAKS---------------REAIGSSVEQLTLHYQVQH 563
Query: 147 L 147
L
Sbjct: 564 L 564
>gi|302766237|ref|XP_002966539.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
gi|300165959|gb|EFJ32566.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
Length = 1030
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 148/269 (55%), Gaps = 32/269 (11%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
++IDEAAQ E + IPLQL +L D QLPA V S ++ F S+FE
Sbjct: 554 VIIDEAAQAVEPSTLIPLQLLKATRGKCILIRDPKQLPATVLSVPASRLLFDCSMFE--- 610
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY---- 481
+ +L+ QYRMHP I FP++++Y+ +++D STV LHG P+
Sbjct: 611 --SFPVSMLTTQYRMHPEIRSFPSTHYYDGQLKDGSTV---------LHGNRSAPFHRES 659
Query: 482 --SFINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F ++ G+E S N E + ++L L + +++ IG+++PY Q
Sbjct: 660 HTGFFDIRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYLEEVRPGRIGVITPYQEQRK 719
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS---IGFLSNSKRVN 595
+QE + S + + V ++D FQG E D+I++STVR++ G S +GFL++ +R+N
Sbjct: 720 VLQENMRSLHS-----GIDVNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMN 774
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEAL 624
VALTRA+ LW++GNARTL R W+AL
Sbjct: 775 VALTRAKFSLWVVGNARTLERNPD-WKAL 802
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 606 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 664
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 665 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 724
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + SIGI++PY Q VV+ +
Sbjct: 725 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---SIGIITPYEGQRSYVVSSMQ 781
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 782 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 840
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 841 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 871
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 444 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPS 496
Query: 87 NVAIKELAARVVK--LVKESVERDCRDALFFPLG 118
NVA+ +L R+ K L V R+ + P+G
Sbjct: 497 NVAVDQLCERIHKTGLKTVRVTAKSREDVESPVG 530
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 150/264 (56%), Gaps = 10/264 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 595 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 653
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
++ L++QYRMHP +S FP++ FY+ +++ TV +R P+ P F +
Sbjct: 654 NFTPIRLNVQYRMHPCLSKFPSNMFYDGSLQNGVTVSERLRTDVDFPWPVADTPMMFWSN 713
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ KA + + L IG+++PY Q +V+ +
Sbjct: 714 LGNEEISASGTSYLNRTEAANVEKIVTRFLKAGVKA---LDIGVITPYEGQRSYIVSTMQ 770
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 771 NTGT-FKKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 829
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ L I+GN + L++ + LVH
Sbjct: 830 YGLVIIGNPKVLSKHELWHHLLVH 853
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 433 LNHSQITAIKTVLSN-------PLSLIQGPPGTGKTVTSATIIYHLAKINNSQVLVCAPS 485
Query: 87 NVAIKELAAR-------VVKLVKESVERDCRDALFFPLGDILLLGNNE-------RLKVD 132
NVA+ +L R VV+L +S E F L + + + ++ RLK D
Sbjct: 486 NVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNTELTKLARLKAD 545
Query: 133 SG 134
G
Sbjct: 546 QG 547
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 584 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 642
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 643 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 702
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + SIGI++PY Q VV+ +
Sbjct: 703 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYVVSSMQ 759
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 760 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 818
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 819 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 849
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 422 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPS 474
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 475 NVAVDQLCERI 485
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 660 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 719
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + SIGI++PY Q VV+ +
Sbjct: 720 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYVVSSMQ 776
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 777 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 835
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 836 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 866
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 439 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPS 491
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 492 NVAVDQLCERI 502
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 659 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 718
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + SIGI++PY Q VV+ +
Sbjct: 719 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---SIGIITPYEGQRSYVVSSMQ 775
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 776 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 834
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 835 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 865
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 438 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPS 490
Query: 87 NVAIKELAARVVK--LVKESVERDCRDALFFPLG 118
NVA+ +L R+ K L V R+ + P+G
Sbjct: 491 NVAVDQLCERIHKTGLKTVRVTAKSREDVESPVG 524
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 584 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 642
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
G + L++QYRMHP +S FP++ FY+ +++ T +R + P+ + P F +
Sbjct: 643 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 702
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + SIGI++PY Q VV+ +
Sbjct: 703 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---SIGIITPYEGQRSYVVSSMQ 759
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 760 ATGT-FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 818
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ + C
Sbjct: 819 YGLVILGNPKVLS-KHPLWNYLLLHFKEKNCL 849
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 422 LNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPS 474
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 475 NVAVDQLCERI 485
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 11/278 (3%)
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
ML V+ + +VIDEAAQ E + IPL+ G K ++ GD QLP V S+ + +
Sbjct: 1711 MLSGVSFD-FETVVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQEAEKLG 1768
Query: 416 FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
+ +SLF R+ + HLLSIQYRMHP IS FP+ FY++K++D + + + + +
Sbjct: 1769 YSQSLFVRMFERSPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAQLTRQP-WHK 1827
Query: 475 GPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK---LSIGIVS 531
+ P+ F+++ HS N E +V + + L ID+ + IG+V+
Sbjct: 1828 FELTRPFKFLSIKAPESPGRMHSIINREEANVALALYERLR---IDNPSENFDYRIGVVT 1884
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSN 590
Y AQV ++ +Y + ++DGFQG E+D+II+S VRS SIGFLS+
Sbjct: 1885 MYKAQVFELKRTFQQRYGLDIVERIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSD 1944
Query: 591 SKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
+R+NVA+TRA+ L+I+GNA L R +W+ LV A
Sbjct: 1945 QRRLNVAVTRAKSNLFIIGNAEHLRRGDPIWDRLVTTA 1982
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 34/134 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
+N+ QA+A+L L LI GPPGTGKTKT+ L+ +
Sbjct: 1472 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSSRKGPTTSIQAG 1525
Query: 75 --QMKF----RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
Q K + L+C P+N AI E+A R + R + P I+ +G ++
Sbjct: 1526 QNQGKLGATKKILLCAPSNAAIDEVAKRARAGI-----RLADGKVIHP--KIVRMGRDDT 1578
Query: 129 LKVDSGVEEIYLDY 142
+ V V++I L+Y
Sbjct: 1579 MNV--SVKDIALEY 1590
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 149/267 (55%), Gaps = 20/267 (7%)
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
M + E + L+ DE+ Q E IP+Q +K +L GD QLP V+S + +
Sbjct: 338 MHREIGKEKFDTLIFDESGQTMEPMCWIPIQ--KVKKVILAGDHLQLPPTVKSDEAAKKG 395
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
SL E+L L +L+IQYRM+ I FP+ +FY+NK+ +V+ +++ +
Sbjct: 396 LAISLLEKLMPLPGISEMLAIQYRMNEKIMQFPSQWFYDNKLEAHGSVKDHAFDDDVIQ- 454
Query: 476 PMYGPYSFINVFG-GREEFI---EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVS 531
FI+ G G EE + RN E +V+ IL N+ + ++ SIGI+S
Sbjct: 455 -------FIDTAGTGYEEELVGAPFGIRNKQEADLVLAILNNV----AELNKQASIGIIS 503
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
PY Q+ I+E+L + + S ++V ++DGFQG E+D+IIIS VRSN IGFL +
Sbjct: 504 PYKLQIQYIREQLIEQKITSKN--IQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLKDL 561
Query: 592 KRVNVALTRARHCLWILGNARTLTRKK 618
+R+NVA+TRAR L ++G++ TL+ K
Sbjct: 562 RRMNVAITRARKKLIVIGDSSTLSSSK 588
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTNVAI----KELAARVVKLVK 102
+ +I GPPGTGKT T+ ++ L++ R LVC +N A+ + LAAR + +V+
Sbjct: 185 VAIIHGPPGTGKTTTIVEIVKTLIEKGERVLVCASSNAAVDVLTERLAARGLPVVR 240
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 15/293 (5%)
Query: 341 LKRASLFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
L A + +T SSS LHS + ++IDEA Q E E IP+ + G + VL GD
Sbjct: 583 LDAADVICTTCSSSADRRLHSYEFQ---TVLIDEATQAVEPECLIPI-VRGCRQLVLVGD 638
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QL +V ++ +A SLFERL LG L +QYRMHP++S FP++ FY+ ++
Sbjct: 639 HKQLGPVVLNRKVADAGMNLSLFERLVLLGVKPRRLEVQYRMHPALSEFPSNMFYDGMLQ 698
Query: 459 DSSTVRKRSYEKRFLHGPMYG-PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYK 516
+ + +R + P+ P F G E S N E S V K++ L K
Sbjct: 699 NGVSAHERLRRNVAIPWPVPNMPMMFYQNLGQEEISASGTSYLNRTEASSVEKLVTTLLK 758
Query: 517 AWIDSKEKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
A + ++ IG+V+PY Q V+ + GS + A V+V S+D FQG E+D II
Sbjct: 759 AGVAAEH---IGVVTPYEGQRNFVINYMQLHGS-MMKDAYRNVEVASVDAFQGREKDYII 814
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
+S VRSN+ IGFLS+ +R+NVALTRAR L ++GN R L + + LVH
Sbjct: 815 VSCVRSNSSLGIGFLSDPRRLNVALTRARFGLILIGNPRILCKNPLWYHLLVH 867
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ A+ + L + + LI GPPGTGKT T + L+ L+QMK + LVC P+
Sbjct: 447 LNYSQLTALKTVL-------TSPLSLIQGPPGTGKTVTSASLIYHLVQMKRGKILVCAPS 499
Query: 87 NVAIKELAA-------RVVKLV---KESVERDCR 110
NVA+ +L +VV+LV +E++ R
Sbjct: 500 NVAVDQLTEKLHRTGLKVVRLVSRMRETISSQVR 533
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 146/264 (55%), Gaps = 7/264 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E +PL ++G K VL GD CQL ++ K + A G+SLFERL L
Sbjct: 957 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1015
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSFINV 486
G + L +QYRMHP++S FP+ FY+ +++ T+++R Y K F P F N
Sbjct: 1016 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 1075
Query: 487 FGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E S + K++ L + + IG+++PY Q I
Sbjct: 1076 TGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPSQ---IGVITPYEGQRAYITSLFQ 1132
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA++ L
Sbjct: 1133 KNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGL 1192
Query: 606 WILGNARTLTRKKSVWEALVHDAN 629
I GNA+ L+R + + L H++N
Sbjct: 1193 IICGNAKVLSRHHVMIKKL-HNSN 1215
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-R 79
P+L++ LN SQ A+ L + + LI GPPGTGKT T + L+ L + K +
Sbjct: 787 APNLAA-LNHSQIDAIKKSLV-------SPLSLIQGPPGTGKTLTCATLVYHLSKTKMGK 838
Query: 80 TLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP-LGDILLLGNNERL-KVDSGVE 136
LV P+NVA+ +L+ R+ K + V + + P + D L L N +L K D G E
Sbjct: 839 VLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKLIKSDIGEE 897
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E IPL L G K VL GD QL +V+ K +++A +SLFERL L
Sbjct: 645 VLVDEATQACEPECLIPLVL-GSKQVVLVGDHQQLGPVVQHKKASKAGLSQSLFERLIIL 703
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G L +QYRMHP +S FP++ FYE +++ TV++R + P++ P F
Sbjct: 704 GLRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERIRPEIDFPWPVHETPMIFYGS 763
Query: 487 FGGREEFIEHSCR---NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQ 541
FG +E I S + N E + V K++ KA + + IGIV+PY Q V
Sbjct: 764 FG--QEEIAASGKSYLNRTEAAYVEKVVTKFLKAGVTPAQ---IGIVTPYEGQRAYVVQH 818
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ ++V S+D FQG E+D II++ VRSN IGFL + +R+NVALTRA
Sbjct: 819 MQFNGSLKKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFLVDPRRLNVALTRA 878
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
++ L I+GN + L K +W L+ C
Sbjct: 879 KYGLVIVGNPKVLA-KHPLWYQLLMTFREHSCL 910
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQA AV S L + + LI GPPGTGKT T + ++ L M K + LVC P+
Sbjct: 483 LNHSQATAVKSVLSK-------PLSLIQGPPGTGKTVTSATIVYHLANMNKGQVLVCAPS 535
Query: 87 NVAIKELAARVVK 99
NVA+ L +++ K
Sbjct: 536 NVAVDHLTSKIHK 548
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K +L GD CQL +V S + +A + RSLFERL +
Sbjct: 538 VLIDEATQGTEPEVLIPL-VRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLM 596
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRM+PS+S FP+ ++YE +++ T +R + F + P F N
Sbjct: 597 GHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKPIFFYNAT 656
Query: 488 GGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G E S N E ++ +I+ L + ++ + IG+++PY +Q ++
Sbjct: 657 GNEELGSNGRSYLNRAEAALTEQIVTKLIQGGVEPGD---IGVITPYRSQCRYLR----- 708
Query: 547 KYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Y++ +G V++ S+D FQG E++ II+S VRSN+ GF+++ +R+NV+LT
Sbjct: 709 SYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGRRLNVSLT 768
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA+ L I+GN + +R E LVH
Sbjct: 769 RAKRGLIIMGNVQLFSRYPGWHELLVH 795
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRT 80
P LN SQ QA+ LR + LI GPPGTGKT T V+++ + +K R
Sbjct: 366 PRGHHNLNYSQEQALRVALRN-------PLTLIQGPPGTGKTSTSVAIIRELHSHVKSRI 418
Query: 81 LVCTPTNVAIKELAARV 97
LVC P+NVA+ LA RV
Sbjct: 419 LVCAPSNVAVDHLAQRV 435
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
S L+IQYRMHP +S FP++ FY+ +++ T R + P+ P F +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSN 728
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + + IG+++PY Q +V +
Sbjct: 729 LGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPAD---IGVITPYEGQRSYIVTTMQ 785
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ Y V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 786 NSGT-YKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 844
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 845 YGLVILGNPKVLS-KHELWHNLLVHFKDRKCF 875
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 448 LNPSQVGAIKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 501 NVAVDQLCERV 511
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 145/273 (53%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E IPL + G K V GD QL ++ +K + A +SLFERL L
Sbjct: 645 VLVDEATQAAEPEVMIPLVM-GCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIML 703
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R +R + P P+ + F
Sbjct: 704 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERL--RREVDFPWPVPWLPMFFF 761
Query: 488 G--GREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI--Q 541
G+EE N E S V KI+ +KA + + IGIV+PY Q I
Sbjct: 762 QNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYIVNH 818
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+L V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRA
Sbjct: 819 MQLHGSLKKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRA 878
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
R+ L ILGN + L K +W L+ + C
Sbjct: 879 RYGLVILGNPKVLN-KHPLWHYLLVHYKEKGCL 910
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M LVC P+
Sbjct: 483 LNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVTSATIVYQLSKMNPGAVLVCAPS 535
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL---LGNNE 127
NVA+ +L ++ +K+V+ S + R+AL P+ + L + NN+
Sbjct: 536 NVAVDQLCEKIHLTGLKVVRLSAK--SREALDSPISFLTLHEQVANND 581
>gi|449269034|gb|EMC79843.1| putative helicase senataxin, partial [Columba livia]
Length = 2491
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 189/387 (48%), Gaps = 54/387 (13%)
Query: 273 VSEELEELLSHSVDEGLSKSIVGIKYL--------LHKRRSECHFVLRKLQSSFNELNLP 324
+ +EL+ L + K VG KY L K R E +++++ ++
Sbjct: 2103 LDQELDRLSRQRARDRCEKREVGRKYQMLAAEISRLAKERQELASQIKEVRGHSQKVQAD 2162
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA---MEPLNFLVIDEAAQLKESES 381
+E D++ LST+ + + A ++P + +++DEA Q E E+
Sbjct: 2163 IILEADVI------------CCTLSTSGGGLLESTFARQRLDPFSCVIVDEAGQSCEVET 2210
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL-------- 433
IPL + VL GD QLP V+S + + + SL RL +HL
Sbjct: 2211 LIPL-IHRCNKLVLVGDPRQLPPTVKSVKAQDYGYDHSLMARLH-----QHLEQQVQNNV 2264
Query: 434 --------LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
L++QYRMHP I FP++Y Y +R K + E R + PY +
Sbjct: 2265 LRSLPVVQLTVQYRMHPDICLFPSNYVYGRTLR----TDKATEENRCSSEWPFQPYLIFD 2320
Query: 486 VFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
V REE S N EV +VM+++ + + D + IGI++PYSAQ IQE+L
Sbjct: 2321 VGDSREERDNDSFSNPQEVKLVMELIRTIKEKRKDLGLR-RIGIITPYSAQKKKIQEQLD 2379
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFLSNSKRVNVALTRARHC 604
Y N++ +V ++D FQG E+D II++ VR+N+ GSIGFL++ +R+NV +TRAR
Sbjct: 2380 RVYRNNS--PGEVDTVDAFQGREKDCIIVTCVRANSTRGSIGFLASLQRLNVTITRARFS 2437
Query: 605 LWILGNARTLTRKKSVWEALVHDANAR 631
L+ILG +TL K W L+ DA R
Sbjct: 2438 LFILGRLKTLMENKD-WNELIQDAQRR 2463
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 30/124 (24%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKFRT----------------LVCTPTNVAIKELA 94
I LI GPPGTGK+KT+ LL +L+ R LVC P+N A+ EL
Sbjct: 1975 ICLIHGPPGTGKSKTIVGLLSRVLKENTRNEKATQKTNSKMKPNRFLVCAPSNAAVDELM 2034
Query: 95 ARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV-----KR 146
+++ K C++ PL GDI L+ ++S V LD +V +R
Sbjct: 2035 KKIITAFKGK----CQNKQ--PLGNCGDITLVRLGAEKAINSEVRGFSLDKQVEHRMKRR 2088
Query: 147 LADC 150
ADC
Sbjct: 2089 PADC 2092
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
S L+IQYRMHP +S FP++ FY+ +++ T R + P+ P F +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSN 728
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + + IG+++PY Q +V +
Sbjct: 729 LGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPAD---IGVITPYEGQRSYIVTTMQ 785
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ Y V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 786 NSGT-YKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 844
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 845 YGLVILGNPKVLS-KHELWHNLLVHFKDRKCF 875
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 448 LNPSQVGAIKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 501 NVAVDQLCERV 511
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 177/338 (52%), Gaps = 24/338 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 608 VLIDEATQATEPECMIPLVM-GCKQVVLVGDHQQLGPVIMNKKAAKAGLQQSLFERLVVL 666
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G S L++QYRMHP +S FP++ FYE +++ + +R + P+ ++
Sbjct: 667 GISPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNVDFPWPVNDTPMMFHMS 726
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E S KI++ +KA + + IGI++PY Q +V+ +
Sbjct: 727 LGQEEISSSGTSYLNRTEASNCEKIVVKFFKAGVKFSQ---IGIITPYEGQRSYIVSSMQ 783
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ GS ++V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 784 QSGS-LRKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLSDPRRLNVALTRAK 842
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
+ + ILGN + L+ K +W L+ + C + +L +++ K
Sbjct: 843 YGVVILGNPKVLS-KHPLWYHLLLHYKEKNCLVEGPLN-NLQVSMIHFPK---------- 890
Query: 663 PESRLFRSQRWKVNFSENFLKSFRKLTSD--PTKKSVI 698
P++ +QR + + + K R TSD P S+I
Sbjct: 891 PKTDYRGTQRHPMMHNRSSYKPTRVPTSDSIPNNSSII 928
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 14/100 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 446 LNVSQVYAVRSVLQK-------PLSLIQGPPGTGKTVTSATIVYHLAKMNSGQVLVCAPS 498
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL 122
NVA+ +L ++ +K+V+ S + R+ L P+ + L
Sbjct: 499 NVAVDQLCKKIHQTGLKVVRVSAK--SREDLESPVASLTL 536
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 152/278 (54%), Gaps = 11/278 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K VL GD QL ++ + + +A +SLFERL L
Sbjct: 577 VLIDESTQASEPECLIPI-IKGAKQVVLVGDHQQLGPVILDRNAGDAGLKQSLFERLISL 635
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ TV +R+ P+ P F
Sbjct: 636 GHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWAN 695
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L+K D + IG+V+PY Q I +
Sbjct: 696 YG-REEISANGTSYLNRIEAINCERIITRLFK---DGVKPEQIGVVTPYEGQRAYIIQYM 751
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N+ SIGFL++ +R+NVALTRA+
Sbjct: 752 QMNGSMDKDLYMTVEVASVDAFQGREKDYIILSCVRANDQQSIGFLTDPRRLNVALTRAK 811
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+ L ILGN +L R S+W L+ + C D
Sbjct: 812 YGLAILGNPASLCR-NSIWNHLLIHFREKGCLVEGTMD 848
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ AV L++ + LI GPPGTGKT T + ++ L +M K R LVC
Sbjct: 415 TKLNTSQVNAVAHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKMHKERVLVCA 467
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 468 PSNVAVDHLAAKLRDMGLKVVRLTAKSRE 496
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K +L GD CQL +V S + +A + RSLFERL +
Sbjct: 538 VLIDEATQGTEPEVLIPL-VRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLM 596
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRM+PS+S FP+ ++YE +++ T +R + F + P F N
Sbjct: 597 GHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKPIFFYNAT 656
Query: 488 GGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G E S N E ++ +I+ L + ++ + IG+++PY +Q ++
Sbjct: 657 GNEELGSNGRSYLNRAEAALTEQIVTKLIQGGVEPGD---IGVITPYRSQCRYLR----- 708
Query: 547 KYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Y++ +G V++ S+D FQG E++ II+S VRSN+ GF+++ +R+NV+LT
Sbjct: 709 SYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGRRLNVSLT 768
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA+ L I+GN + +R E LVH
Sbjct: 769 RAKRGLIIMGNVQLFSRYPGWHELLVH 795
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRT 80
P LN SQ QA+ LR + LI GPPGTGKT T V+++ + +K R
Sbjct: 366 PRGHHNLNYSQEQALRVALRN-------PLTLIQGPPGTGKTSTSVAIIRELHSHVKSRI 418
Query: 81 LVCTPTNVAIKELAARV 97
LVC P+NVA+ LA RV
Sbjct: 419 LVCAPSNVAVDHLAQRV 435
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 20/333 (6%)
Query: 311 LRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--L 368
L +L+ E + E LE +++A + T S++ + ++ L F +
Sbjct: 529 LFELKDELGEFSAADEKEFAKLEKKASEAIIRKAEVICCTCSTA---GNFKLQNLTFSAV 585
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSNEACFGRSLFERLSYL 427
+IDE Q E E IPL + G K V GD QL P ++ SK +N A +SLFERL +
Sbjct: 586 LIDEVTQASEPECLIPL-VHGCKQVVFVGDHQQLGPVILNSKAAN-AGLNKSLFERLILI 643
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G+ L +QYRMHPS+S FP++ FYE +++ T R +++ P P + +
Sbjct: 644 GHVPIRLMVQYRMHPSLSEFPSNMFYEGSLQNGVTTASRVL--KYVDFPWPQPQHPMLFW 701
Query: 488 G--GREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI-QE 542
G+EE N E + +I+ L+K + + IG+V+PY Q + Q
Sbjct: 702 SNLGQEEISASGTSFLNRTEAANCERIVTRLFKCGVAPDQ---IGVVTPYEGQRAYVTQY 758
Query: 543 KLGSKYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ S V+ A + V+V S+D FQG E+D II++ VRS+ G IGFLS+ +R+NVALTRA
Sbjct: 759 MVSSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRSSKTGGIGFLSDPRRLNVALTRA 818
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
++ L ILGN L R +W L+ +++C
Sbjct: 819 KYGLIILGNPHVLARHP-LWLHLITYFRSKRCL 850
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
E F S + LN SQ AV LR+ LI GPPGTGKT + ++ L ++
Sbjct: 406 EQFSISGFNELNVSQVNAVKQVLRR-------PFSLIQGPPGTGKTVVSTTIIYHLANIR 458
Query: 78 -------FRTLVCTPTNVAIKELAARVV 98
+ LVC P+NVA+ +LA R+
Sbjct: 459 RQNPEKGSKILVCAPSNVAVDQLAERIA 486
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 171/344 (49%), Gaps = 37/344 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E+ IP+ L G KH +L GD CQL ++ K + +A +SLFERL L
Sbjct: 725 VLIDEATQATEPETLIPI-LRGAKHVILVGDHCQLGPVIMCKKAAKAGLNQSLFERLVCL 783
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKR-----SYEKRFLHGPMYGPYS 482
G L +QYRMHP +S FP+ FYE +++ + + R ++ PM +S
Sbjct: 784 GIRPIRLQVQYRMHPVLSAFPSMTFYEGSLQNGISKQDRILSDFKFQWPASEKPMMFYHS 843
Query: 483 FIN--VFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
N + F+ VE V + +L + IGI++PY Q I
Sbjct: 844 ISNEEISASGTSFLNRQEAYNVEALVTQFLKFDL--------KPEQIGIITPYEGQKAFI 895
Query: 541 QEKLGSKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
+ Y+ +G ++V S+D FQG E+D I++S VRSN IGFL++ +R
Sbjct: 896 -----TSYMQRSGQLDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEASGIGFLNDPRR 950
Query: 594 VNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKE 653
+NVALTRA++ L I GNA+ L+ K +W L+++ + C + +L ++ +++
Sbjct: 951 LNVALTRAKYGLVIFGNAKVLS-KHDLWNNLLNEFKNQGCLVEGPNIFNLKPCVIVLRRP 1009
Query: 654 LDELDELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSV 697
+ NP+ R F +N NF KS + T S+
Sbjct: 1010 VK-----YNPDKRDFVLTETALN---NFEKSQQAAVGHSTPSSI 1045
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 42 QMRCDHKATIQ---LIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPTNVAIKELAARV 97
QM KA I LI GPPGTGKT T + L+ L++ K + LVC P+N+A+ +L ++
Sbjct: 565 QMNAVKKALITPLCLIQGPPGTGKTVTSTTLVTHLVKQKMGKVLVCAPSNIAVDQLTDKI 624
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLIKL 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
+ L+ QYRMHP +S FP++ FY+ +++ T +R + P+ P F +
Sbjct: 670 QLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRKDVDFPWPIAETPMMFWSN 729
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + E IG+++PY Q +V +
Sbjct: 730 LGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQRSYIVTTMQ 786
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ Y V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 787 NSGT-YKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 845
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 846 YGLVILGNPKVLS-KHELWHNLLVHFKDRKCF 876
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 449 LNQSQVDAIKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 501
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 502 NVAVDQLCERIHRTNLKVVRLTAKSRE 528
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
S L+IQYRMHP +S FP++ FY+ +++ T R + P+ P F +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSN 728
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + + IG+++PY Q +V +
Sbjct: 729 LGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPAD---IGVITPYEGQRSYIVTTMQ 785
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ Y V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 786 NSGT-YKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 844
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 845 YGLVILGNPKVLS-KHELWHNLLVHFKDRKCF 875
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 448 LNPSQVGAIKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 87 NVAIKELAARV 97
NVA+ +L RV
Sbjct: 501 NVAVDQLCERV 511
>gi|242061504|ref|XP_002452041.1| hypothetical protein SORBIDRAFT_04g017405 [Sorghum bicolor]
gi|241931872|gb|EES05017.1| hypothetical protein SORBIDRAFT_04g017405 [Sorghum bicolor]
Length = 157
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 106/196 (54%), Gaps = 41/196 (20%)
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH- 496
YRMHP IS FP S FY+ K+ D V + Y K FL G + PYSFIN+ G E +H
Sbjct: 1 YRMHPEISKFPVSTFYDGKLSDGLNVSHKDYNKMFLAGKLLRPYSFINIDGSHETNEKHG 60
Query: 497 -SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
S +N VEV ++ I+ L K
Sbjct: 61 RSLKNSVEVDAIVLIVQRLLK--------------------------------------- 81
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
VK+ S+DGFQG EED+IIISTVRSN GS+GFLSN +R NVALTRA+HCLWI+GN TL
Sbjct: 82 VKIKSVDGFQGAEEDVIIISTVRSNGAGSVGFLSNLQRTNVALTRAKHCLWIVGNGTTLF 141
Query: 616 RKKSVWEALVHDANAR 631
S+W+ +V D R
Sbjct: 142 NSNSIWQKIVKDTWDR 157
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 146/267 (54%), Gaps = 17/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G + +L GD CQL +V K + A +SLFERL L
Sbjct: 626 ILIDESMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 684
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G + L +QYRMHP +S FP+ +FYE +++ +R K P V
Sbjct: 685 GIRPYRLEVQYRMHPELSRFPSDFFYEGSLQNGVCSEERKLAKVDFPWPANDKPMLFYVT 744
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE S N E S V KI+ +A I ++ IG+++PY Q +
Sbjct: 745 TGQEEIAGSGTSYLNRTEASNVEKIVTKFLRAGIKPEQ---IGLITPYEGQRAYLVQFMQ 801
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L SK ++V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 802 YQGSLHSKLYQE----IEVASVDAFQGREKDIIIMSCVRSNELLGIGFLNDPRRLNVALT 857
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L+ K+ +W L++
Sbjct: 858 RAKYGIIIIGNPKVLS-KQPLWNHLLN 883
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 464 LNRSQVYAVKQALQR-------PLSLIQGPPGTGKTVTSATIVYHLARQPTGAVLVCAPS 516
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 517 NIAVDQLTEKI 527
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 151/266 (56%), Gaps = 14/266 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +PL L G K + GD CQL ++ K + A +SLFERL L
Sbjct: 665 VLIDESTQATEPECLLPLVL-GAKQVIFVGDHCQLGPVIMCKKAARAGLSQSLFERLIML 723
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP +S FP++ FYE +++ T +R+ P+ P F N
Sbjct: 724 GVRPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQGALDFPWPVPNKPMFFYNC 783
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
G +EE S N E +V KI+ + +A + S + IG+++PY Q +V
Sbjct: 784 LG-QEEISSSGTSYLNRNEAAVCEKIVTHFLQAGVTSAQ---IGVITPYEGQRAYLVNYM 839
Query: 542 EKLGSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
++ GS + S + ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTR
Sbjct: 840 QRNGS--LRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTR 897
Query: 601 ARHCLWILGNARTLTRKKSVWEALVH 626
A++ + +LGNA+ L+R+ LVH
Sbjct: 898 AKYGVVVLGNAKVLSRQPLWNNLLVH 923
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T S + ++ Q + + LVC P+
Sbjct: 499 LNHSQVAAVKSVLQK-------PLSLIQGPPGTGKTVTSASTVYQLVKQNQGQVLVCAPS 551
Query: 87 NVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKR 146
NVA+ +L + + V R C + R V S VE + L Y VK
Sbjct: 552 NVAVDQLTEK-IHATGLKVVRLCAKS---------------REAVSSPVEFLTLHYLVKH 595
Query: 147 LA 148
LA
Sbjct: 596 LA 597
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 148/280 (52%), Gaps = 11/280 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++DE+ Q E E+ IP+ G K VL GD QL +V ++ A RSLFERL
Sbjct: 590 IVLVDESTQATEPEALIPIT-RGAKQVVLVGDHQQLGPVVLDPAASAAGLRRSLFERLVS 648
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFIN 485
+G+ L +QYRMHP++S F ++ FYE + + T R+ P+ P F
Sbjct: 649 MGHVPLRLEVQYRMHPALSEFASNMFYEGSLLNGVTSDDRTRPGADFPWPVPDRPMMFWA 708
Query: 486 VFGGREEFIEHSCR-NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G E S N VE V KI+ L + D IG+++PY Q V I +
Sbjct: 709 NYGKEEIGANGSSYLNRVEAMNVDKIIARLVR---DGVSPDQIGVITPYEGQRVYIWQYL 765
Query: 543 KLGSKYVNSA--GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
KL S SA V+V S+D FQG E+D II+S VR+N IGFL +S+R+NVALTR
Sbjct: 766 KLNSTVPKSALNELEVEVSSVDAFQGREKDYIILSCVRANEDRDIGFLKDSRRLNVALTR 825
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
A+ L ILGN R+L++ K +W +L+ R C D
Sbjct: 826 AKFGLIILGNPRSLSKNK-LWNSLLVHYRERGCLVEGPLD 864
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
S LN SQ AV + + + LI GPPGTGKT T + ++ L+++ + R LVC
Sbjct: 428 SALNASQRAAVAHAI-------ASPLTLIQGPPGTGKTVTSAAIVRELVRLRRSRVLVCA 480
Query: 85 PTNVAIKELA-------ARVVKLVKESVE 106
P+NVA+ LA +VV+L S E
Sbjct: 481 PSNVAVDHLALKLRAAGLKVVRLAARSRE 509
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 534 VLIDESTQASEPECLIPI-VKGAKQIILVGDHQQLGPVILERKAGDAGLKQSLFERLIAL 592
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++G P F
Sbjct: 593 GHVPLRLEVQYRMNPYLSDFPSNVFYEGSLQNGVTIEQRTVTNSTFPWPIHGVPMMFWAN 652
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L+K D + IG+++PY Q I +
Sbjct: 653 YG-REEISANGTSYLNRIEAMNCERIITRLFK---DGVKPEQIGVITPYEGQRAFILQYM 708
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ +V+V S+D FQG E+D II+S VR+N IGFLS+ +R+NV LTRA+
Sbjct: 709 QMNGSLDRDLYLSVEVASVDAFQGREKDYIILSCVRANEQQIIGFLSDPRRLNVGLTRAK 768
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R L+ ++W L+ + C
Sbjct: 769 YGLVILGNPRALS-TNALWNNLLIHFREKGCL 799
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L +M R LVC
Sbjct: 372 AQLNASQSHAVEHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKMHNERILVCA 424
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 425 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 453
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 7/264 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E +PL ++G K VL GD CQL ++ K + A G+SLFERL L
Sbjct: 982 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1040
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSFINV 486
G + L +QYRMHP++S FP+ FY+ +++ T+++R Y K F P F N
Sbjct: 1041 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 1100
Query: 487 FGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E S + K++ L + + IG+++PY Q I
Sbjct: 1101 TGLEEMSASGTSYLNRAEASNMEKLVRTLISCGLKPTQ---IGVITPYEGQRAYITSLFQ 1157
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA++ L
Sbjct: 1158 KNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGL 1217
Query: 606 WILGNARTLTRKKSVWEALVHDAN 629
I GNA+ L+R + + + H++N
Sbjct: 1218 IICGNAKVLSRHHVMIKKM-HNSN 1240
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RT 80
P+L++ LN SQ A+ L + + LI GPPGTGKT T + L+ L + K +
Sbjct: 813 PNLAA-LNHSQIDAIKKSL-------VSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKV 864
Query: 81 LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP-LGDILLLGNNER-LKVDSGVE 136
LV P+NVA+ +L+ R+ K + V + + P + D L L N + LK D G E
Sbjct: 865 LVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKLLKSDIGEE 922
>gi|357460651|ref|XP_003600607.1| hypothetical protein MTR_3g064200 [Medicago truncatula]
gi|355489655|gb|AES70858.1| hypothetical protein MTR_3g064200 [Medicago truncatula]
Length = 403
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDEL 657
L++ +CLWI+GN TL S+WE L++DA AR CF +AD+D+ L AI EL ++
Sbjct: 78 LSKPPYCLWIIGNGETLMNSGSIWEVLLYDAVARGCFHSADEDERLSHAIATAMIELGQV 137
Query: 658 DELLNPESRLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKR--NV 715
+LLN S LFR WKV F ++FL S ++ S K + LL++LS+GW R N+
Sbjct: 138 GDLLNMSSLLFRKATWKVCFDQSFLISMARIKSTEDCKKICSLLMQLSSGWHQPHREINI 197
Query: 716 DSVCGSSLHIIKQFKV-EGFYIICTIDIVKE-SQYFQVLKVWDILPLEDVPKVVARLDNI 773
V +S ++ KV E YI+ TIDI++E S Y Q+LK+WD+LPL +V K+V +D
Sbjct: 198 GVVDDTSSQLLGLCKVNELLYIVWTIDILEENSDYVQILKLWDVLPLSEVSKMVRDIDIF 257
Query: 774 YVKYTAEFINHCKEKSIEGNLEVPKTWTATSNVVRFKNLADND 816
Y+ + CK + + VP W A N NL +D
Sbjct: 258 CRSYSVDIQRCCKIRCSNRDFVVPLRWPANLNNQTNHNLPQDD 300
>gi|310791058|gb|EFQ26587.1| helicase sen1 [Glomerella graminicola M1.001]
Length = 2076
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 181/359 (50%), Gaps = 25/359 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--S 425
++IDEAAQ E + IPL+ G +L GD QLP V S+ + + +SLF R+ +
Sbjct: 1583 VIIDEAAQCVELSALIPLKY-GCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQN 1641
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKI---RDSSTVRKRSYEKRFLHGPMYGPYS 482
+ Y HLL QYRMHP IS FP+ FYE K+ D S +R + + L GPY
Sbjct: 1642 HPDYV-HLLDRQYRMHPEISLFPSMEFYEGKLVDGEDMSALRCQPWHATAL----LGPYR 1696
Query: 483 FINVFGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKE--KLSIGIVSPYSAQVVA 539
F +V G + + + S N E+ V M+ L +KA K IGI++PY AQ+
Sbjct: 1697 FFDVEGTQSKGSKGRSLVNHAELKVAMQ-LYERFKADFGRNYDIKGKIGIITPYKAQLQE 1755
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
++ + ++ ++ ++ + D FQG E ++II S VR++ G IGF+ + +R+NV LT
Sbjct: 1756 LKWQFSRQFGDNITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLT 1815
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RA+ LWILG++R L + + W L+ +A R + D L K + +K L
Sbjct: 1816 RAKSSLWILGDSRALVQGE-FWNKLIDNAKQRSLYTKGDIMSMLRKPSVIMK----SLPP 1870
Query: 660 LLNPES-----RLFRSQRWKVNFSENFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKR 713
L P+ R +SQ +++ ++ RK P + + + + GW R
Sbjct: 1871 LPTPQGDFGIERPVQSQAEEIDMTDAPTAPPRKAIQLPQQPPTNYTVAERRPGWEGNNR 1929
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 37/141 (26%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
LN QA+A+L R + T LI GPPGTGKTKT+ ++ LL
Sbjct: 1335 LNPGQAKAILGA----RDNDGFT--LIQGPPGTGKTKTIIAMVGSLLTGNIQPPGTAIKP 1388
Query: 75 ---------QMKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGN 125
M + LVC P+N A+ EL R+ + VK + F + ++L LG
Sbjct: 1389 KLVGQAAQNSMPKKLLVCAPSNTAVDELVLRLKQGVK------TMNGSFHKI-NVLRLGR 1441
Query: 126 NERLKVDSGVEEIYLDYRVKR 146
++ +++ V ++ LD VK+
Sbjct: 1442 SD--AINAAVRDVTLDELVKQ 1460
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 579 VLIDESTQATEPECLIPI-VKGAKQVILVGDHKQLGPVILERKAGDAGLKQSLFERLISL 637
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L IQYRM+P +S FP++ FYE +++ T+ +R+ P++G P F
Sbjct: 638 GHIPFRLEIQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWAN 697
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +I+ L+K D + IG+++PY Q I + +
Sbjct: 698 YG-REELSSNGTSYLNRIEAMNCERIITKLFK---DGVKPEQIGVITPYEGQRAYILQYM 753
Query: 545 GSKYVNSAGFAVKV--MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
VKV S+D FQG E+D II+S VR+N+ +IGFL + +R+NV LTRA+
Sbjct: 754 QMNGAMDKDLYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAK 813
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN +L+R +W L+ + C
Sbjct: 814 YGLVILGNPMSLSRNL-LWNHLLIHFREKGCL 844
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN+SQ++AV L++ + LI GPPGTGKT T + ++ L ++ K + LVC
Sbjct: 417 TQLNESQSKAVQHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLTKIHKDKVLVCA 469
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 470 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 498
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 139/251 (55%), Gaps = 6/251 (2%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E +PL ++G K VL GD CQL ++ K + A G+SLFERL L
Sbjct: 866 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 924
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSFINV 486
G + L +QYRMHP++S FP+ FY+ +++ T+++R Y K F P F N
Sbjct: 925 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 984
Query: 487 FGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E S + K++ L + + IG+++PY Q I
Sbjct: 985 TGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPTQ---IGVITPYEGQRAYITSLFQ 1041
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA++ L
Sbjct: 1042 KNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGL 1101
Query: 606 WILGNARTLTR 616
I GNA+ L+R
Sbjct: 1102 IICGNAKVLSR 1112
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-R 79
P+L++ LN SQ A+ L + + LI GPPGTGKT T + L+ L + K +
Sbjct: 696 APNLAA-LNHSQIDAIKKSL-------VSPLSLIQGPPGTGKTLTCATLVYHLSKTKMGK 747
Query: 80 TLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFP-LGDILLLGNNER-LKVDSGVE 136
LV P+NVA+ +L+ R+ K + V + + P + D L L N + LK D G E
Sbjct: 748 VLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKLLKSDIGEE 806
>gi|320166766|gb|EFW43665.1| MAA3 [Capsaspora owczarzaki ATCC 30864]
Length = 2435
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 156/278 (56%), Gaps = 28/278 (10%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ L+IDEA+Q E ES IP + + + AVL GD QLPA V S + ++ RSLFER+
Sbjct: 1737 FDMLIIDEASQCIELESLIPFR-TRPRVAVLVGDPMQLPATVTSMEARQSGLSRSLFERV 1795
Query: 425 SYLGYSK----------HLLSIQYRMHPSISCFPNSYFYENKIRD---SSTVRKRSYEKR 471
+ S LLS QYRM P I+ FPN FYE ++ + R +E+
Sbjct: 1796 AQAVTSAPDRAAADSPIRLLSTQYRMAPQIAKFPNREFYEGRLTNFYPDDHFRLPCHEQL 1855
Query: 472 FLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL---YKAWIDSKEKLSIG 528
+ P+ F NV G+E+ + S N EV V ++L L Y + + +SIG
Sbjct: 1856 -----QFRPFVFYNVHEGKEK-QDKSKINWEEVDTVSRVLQKLHTKYPEMFEGTQPVSIG 1909
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
++SPYS QV I++K+ K + F ++V ++D FQG E+D+++ S V ++ IGFL
Sbjct: 1910 VLSPYSDQVGLIRKKIDQKLPHMQKF-IEVDTVDAFQGREKDIVLFSCVFTDR---IGFL 1965
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTR-KKSVWEALV 625
++++R+NVALTRAR CL+++G A +L + W LV
Sbjct: 1966 ADTRRMNVALTRARKCLFVIGRAESLMNGSEPSWRHLV 2003
Score = 41.2 bits (95), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 27/90 (30%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIW-GPPGTGKTKTVSMLLVIL------------- 73
LNDSQ +AV M H W GPPGTGKTKT+ LL +
Sbjct: 1529 LNDSQFEAVKLA---MSLSHGL---CFWQGPPGTGKTKTILALLGAVVRKSITDAQHRLV 1582
Query: 74 -------LQMKFRTLVCTPTNVAIKELAAR 96
L + R LVC P+N A+ E+ +R
Sbjct: 1583 PNEKSPELTRRKRILVCAPSNTAVDEIISR 1612
>gi|412993566|emb|CCO14077.1| predicted protein [Bathycoccus prasinos]
Length = 1063
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 25/296 (8%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ +++DEAAQ E IPL K L GD QLPA V S+ + + +SLF+RL
Sbjct: 613 FDVIIVDEAAQAVEPSILIPLTEIKAKQVYLVGDPAQLPATVLSRECAKNNYEQSLFKRL 672
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
Y H LS QYRM P I FP+ FY ++RD + ++Y + + +Y P+ F
Sbjct: 673 MDSAYPVHKLSTQYRMLPEIREFPSDQFYGGELRDGPGLLTQNY-REWHECKLYKPFVFY 731
Query: 485 NVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKA-WIDSKEKLSIGIVSPYSAQVVAIQ 541
+V G+EE S N E + +++ L KA + +E I I+SPY AQV I+
Sbjct: 732 DVQHGKEESSSSGFSWVNEEEATFAVELAHQLLKANPVLKREGPKIAIISPYRAQVSMIR 791
Query: 542 EKLGSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVR------------SNNGGS--- 584
KL K+ +++ G V+V+SID QG E+D++I S VR ++N +
Sbjct: 792 RKLERKFGGMHNYGRIVEVLSIDNSQGSEKDVVIFSLVRAPLNDMFQISKKASNANTKSR 851
Query: 585 ---IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+GF+++ +R+NV LTRA+ +++LGNA+ + + W ALV A R C A
Sbjct: 852 RNVLGFVADERRINVGLTRAKCSMFVLGNAKAMMTDPN-WGALVESARKRGCTIEA 906
>gi|449664168|ref|XP_002168656.2| PREDICTED: uncharacterized protein LOC100204258 [Hydra
magnipapillata]
Length = 3199
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/369 (34%), Positives = 182/369 (49%), Gaps = 44/369 (11%)
Query: 333 EDLLKSFCLKRASLFLST---ASSSYMLHSVAME---PLNFLVIDEAAQLKESESTIPLQ 386
E L+ L RA + ST A S M+ + P ++IDEA Q E ++ IPLQ
Sbjct: 1390 EHNLQRSLLLRADIICSTLSGAGSKPMVDAFRRSREIPFRCVIIDEAGQCTEPDALIPLQ 1449
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY---------SKHLLSIQ 437
G VL GD QLPA V S+ + G+SLFERL Y G LL+ Q
Sbjct: 1450 Y-GSSKLVLVGDPAQLPATVISQRAGRFNLGQSLFERL-YKGIIINSEAGVRPAILLNYQ 1507
Query: 438 YRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHS 497
YRM P I FPN FY N+++ + + K+ + + PY F+N+ RE+
Sbjct: 1508 YRMAPEICWFPNKRFYNNELKSNEALIKKKSDLK--------PYVFLNLDESREDKTRMG 1559
Query: 498 -CRNMVEVSVVMKI---LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
N VE ++ I ++ A ++ I +++PY Q I+++L K G
Sbjct: 1560 GIHNPVEREHIIAICEKIVTEKNANVNE-----IAVITPYRYQASLIKQELNKKLAQLEG 1614
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVR-SNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
++V +IDGFQG E+ ++I S VR SN+ SIGFLSN +R+NVALTRA+ L IL N
Sbjct: 1615 --IEVDTIDGFQGREKRIVIFSCVRASNHQESIGFLSNPQRMNVALTRAKDVLIILANCN 1672
Query: 613 TLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK----KELDELDELLNPESRLF 668
++ + W+ALV DA +R F + D + I K+ D L+E N +
Sbjct: 1673 SIEIDED-WKALVDDAKSRGLLFTVQNCNDTLQCIFNTSDVAFKQTDHLEE--NKTKNVT 1729
Query: 669 RSQRWKVNF 677
+Q NF
Sbjct: 1730 HNQSIAKNF 1738
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQ---LIWGPPGTGKTKTVSMLLVILLQMKF---- 78
S LN Q QA LS + + C I L+ GPPGTGK+ T+ ++ L+Q +
Sbjct: 1172 SKLNLMQLQA-LSTVSRAVCQVDFVIPRIVLLQGPPGTGKSYTIKTIITHLMQEFYKSRA 1230
Query: 79 -------RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKV 131
R L C P+N A+ E+ R+V+ + D GD ++ ++ +V
Sbjct: 1231 SSNQKSQRILFCAPSNAAVDEIVRRLVQSPPYRDDNDSHAIKHGNCGDFNIVRVGQKTQV 1290
Query: 132 DSGVEEIYLDYRVKR 146
S + + L+Y ++R
Sbjct: 1291 SSDLVQYSLEYLLER 1305
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 147/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL G+K V+ GD QL + +K + A +SLFERL L
Sbjct: 626 VLIDEATQATEPECMIPLTF-GVKQLVMVGDHSQLGPTIMNKKAARAGLNQSLFERLILL 684
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P + +
Sbjct: 685 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPQPTTPMYFHQN 744
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE N E S V KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 745 LGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVMPSQ---IGIITPYEGQRSYLVSYMQ 801
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS ++V S+D FQG E+D +I+S VRSN IGFL++ +R+NVALTRA+
Sbjct: 802 MNGS-LKKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIGFLNDPRRLNVALTRAK 860
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K ++W L+ ++C
Sbjct: 861 YGLVILGNPKVLS-KHALWHYLLTHYKEKKCL 891
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LV P+
Sbjct: 464 LNHSQIYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVAAPS 516
Query: 87 NVAIKELAARV----VKLVKESVERDCRDAL 113
NVA+ +L ++ +K+V+ V R+AL
Sbjct: 517 NVAVDQLTEKIHQTGLKVVR--VTAKSREAL 545
>gi|294881038|ref|XP_002769213.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239872491|gb|EER01931.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 2247
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 165/301 (54%), Gaps = 15/301 (4%)
Query: 334 DLLKSFCLKRASLF---LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGI 390
D ++S L+ A + L++ SS + ++ + +IDEAAQ E S IPL+
Sbjct: 1757 DAIQSRYLRGADVLFGTLNSYGSSSVTRNLPVGRAEVCLIDEAAQAHEVASLIPLRFD-P 1815
Query: 391 KHAVLFGDECQLPAMVES-KVSNEACFGRSLFERLSYLGYSKH-LLSIQYRMHPSISCFP 448
+ +L GD QLPA V S + S E RSLF++L + H +L+ QYRMHP+I+ FP
Sbjct: 1816 QRLILVGDPQQLPATVLSMRASLEYNLERSLFQKLQEASWPHHVMLTTQYRMHPAIAAFP 1875
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVM 508
+ +FY + S++V R + GPM +F ++ E N E +
Sbjct: 1876 SKHFYHGALVPSNSVLSRPPFAPHMPGPM----TFFDLPDSEEVRRGVGRSNPAEALFIG 1931
Query: 509 KILLNLYKAWIDSKEKL---SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
++L L A D + L +G++SPY QV ++ L Y + + ++V ++D FQ
Sbjct: 1932 RLLQELISALGDKAKTLLPDGLGVISPYKQQVALLKRNL--SYGSLSDEWLEVGTVDSFQ 1989
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
G E+D+I++STVRS+ IGF+++ +R+NV++TRA+ LWI+G+++ L+ + W LV
Sbjct: 1990 GREKDVIVVSTVRSSASSGIGFVADMRRLNVSITRAKRALWIVGDSQRLSSGSTEWRDLV 2049
Query: 626 H 626
Sbjct: 2050 Q 2050
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 13 EGVWNETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVI 72
EG PS S LN+ Q++A+ CD L+ GPPGTGKT+ V +L
Sbjct: 1567 EGSSEYLLTPSTSYALNEGQSKALAYA-----CDASKRAVLLQGPPGTGKTRVVVAILQE 1621
Query: 73 LL----QMKFRTLVCTPTNVAIKELAARVV 98
LL + KF LV P+N A+ E+AAR++
Sbjct: 1622 LLRRQTRRKFPILVSAPSNAAVDEIAARLL 1651
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 845 RAKYGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 159/315 (50%), Gaps = 32/315 (10%)
Query: 322 NLPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKES 379
NL A E LLE D++ C+ LS + +L IDE+ Q E
Sbjct: 578 NLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSIL------------IDESMQSTEP 625
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYR 439
E +P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYR
Sbjct: 626 ECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYR 684
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR 499
MHP +S FP+++FYE +++ R + F P F+ V G+EE
Sbjct: 685 MHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VTQGQEEIAGSGTS 743
Query: 500 --NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVAIQEKLGSKYVNS 551
N E + V KI KA I ++ IGI++PY Q + Q L S+
Sbjct: 744 FLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQYQGSLHSRLYQE 800
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
+++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA+ + I+GN
Sbjct: 801 ----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNP 856
Query: 612 RTLTRKKSVWEALVH 626
+ L K+ +W L++
Sbjct: 857 KVLA-KQQLWNHLLN 870
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 845 RAKYGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 162/310 (52%), Gaps = 19/310 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E TIPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 535 VLIDEATQAAEPECTIPL-IMGCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVML 593
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 594 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPIPDTPMFFYQN 653
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VVA 539
G+EE S N E S KI+ +KA + + IGIV+PY Q +
Sbjct: 654 LGQEEISSSGTSFLNRTEASNCEKIVTKFFKAGVVPAQ---IGIVTPYEGQRSYIVNYMQ 710
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
L + N V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVA+T
Sbjct: 711 FNGALKKELYNQ----VEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAMT 766
Query: 600 RARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDE 659
RA++ ILGN + L+ K +W L+ ++ + +L ++++ K L++
Sbjct: 767 RAKYGAVILGNPKILS-KHPLWHHLLTHFKEKKTLVEGPLN-NLQESMIRFNKPRQPLNK 824
Query: 660 -LLNPESRLF 668
L+P SR F
Sbjct: 825 ATLDPFSRRF 834
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 373 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPS 425
Query: 87 NVAIKELAARV 97
NVA+ +L ++
Sbjct: 426 NVAVDQLCEKI 436
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 149/264 (56%), Gaps = 10/264 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 598 VLIDESTQATEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 656
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++G P F
Sbjct: 657 GHVPIRLEVQYRMNPHLSEFPSNMFYEGTLQNGVTIEQRTVLNSTFPWPIHGVPMMFWAN 716
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q + +
Sbjct: 717 YG-REEISGNGTSYLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYVLQYM 772
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ S V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 773 QMNGAMDKSLYLKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 832
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ L ILGN R+L+R LVH
Sbjct: 833 YGLVILGNPRSLSRNLLWNHLLVH 856
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ+ AV L + + LI GPPGTGKT T + ++ L ++ K R LVC P+
Sbjct: 438 LNASQSNAVKHVLER-------PLSLIQGPPGTGKTVTSATIVYHLAKIHKDRILVCAPS 490
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ LA+ +VV+L +S E
Sbjct: 491 NVAVDHLASKLRDLGLKVVRLTAKSRE 517
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 154/273 (56%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G+K VL GD CQL ++ K + +A +SLFERL L
Sbjct: 598 VLIDESTQATEPEVMVAV-VRGVKQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVVL 656
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP++S FP++ FYE +++ T +R P+ P F +
Sbjct: 657 GTRPIRLQVQYRMHPALSAFPSNVFYEGTLQNGVTQGERQLAGVDWQWPVPDKPMMFWSC 716
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
+ G+EE S N E + V K+ KA + ++ IGI++PY Q +V
Sbjct: 717 Y-GQEELSPSGTSYLNRTEAANVEKVATRFLKAGLRPEQ---IGIITPYEGQRSYIVQFM 772
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ G+ + + ++V ++D FQG E+D+II++ VRSN IGFL++S+R+NVALTRA
Sbjct: 773 QTQGALH-SKLYLEMEVANVDAFQGREKDIIIVTCVRSNEHQGIGFLNDSRRLNVALTRA 831
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
++ + I+GNA+ L+R +W L+ + C
Sbjct: 832 KYGVIIIGNAKILSR-HPLWNQLLTMFKEKNCL 863
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 27/135 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ QAV L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 436 LNHSQVQAVKMVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVRQTSGQVLVCAPS 488
Query: 87 NVAIKELAA-------RVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
N+A+ +LA +VV+L +S R+ L P + L + +LK G E++
Sbjct: 489 NIAVDQLAEKIHRTGLKVVRLCAKS-----RETLDSP---VAFLALHNQLKAVQGAAELH 540
Query: 140 ----LDYRVKRLADC 150
L + LAD
Sbjct: 541 KLQQLKEEIGELADA 555
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 624 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 682
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 683 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 741
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 742 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 798
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 799 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 854
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 855 RAKYGIIIVGNPKVLA-KQQLWNHLLN 880
Score = 47.0 bits (110), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 462 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHAGTVLVCAPS 514
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ + V R C R+A+ P+ + L ++ +S ++++
Sbjct: 515 NTAVDQLTEKIHR-TNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKL 568
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 845 RAKYGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 621 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 679
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 680 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 738
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 739 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 795
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 796 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 851
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 852 RAKYGIIIVGNPKVLA-KQQLWNHLLN 877
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 459 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 511
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ + V R C R+A+ P+ + L ++ +S ++++
Sbjct: 512 NTAVDQLTEKIHR-TNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKL 565
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 146/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 640 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 698
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 699 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPDRPMFFL-VT 757
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 758 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 814
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 815 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 870
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L+ K+ +W L++
Sbjct: 871 RAKYGIIIVGNPKVLS-KQQLWNHLLN 896
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 478 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 530
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ + V R C R+A+ P+ + L ++ +S ++++
Sbjct: 531 NTAVDQLTEKIHR-TNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKL 584
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 144/261 (55%), Gaps = 18/261 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N ++IDEA Q E E +P+ ++G K VL GD CQL ++ K + + G+SLFERL
Sbjct: 828 FNQVLIDEATQSTEPECLVPI-VTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERL 886
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSF 483
LG + L +QYRMHP +S FP+ FY+ +++ T+++R Y K F P F
Sbjct: 887 VMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 946
Query: 484 INVFG-------GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
N G G + +NM V+++ LLN A + + + IG+++PY Q
Sbjct: 947 YNSNGLEEMSASGTSYLNRNEAQNM---EVLVRALLN---AGLKATQ---IGVITPYEGQ 997
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
I ++V S+D FQG E+D I++S VRSN IGFL++ +R+NV
Sbjct: 998 RAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNV 1057
Query: 597 ALTRARHCLWILGNARTLTRK 617
ALTRA++ L I GNA+ L+R+
Sbjct: 1058 ALTRAKYGLIICGNAKVLSRQ 1078
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-- 78
P+L+ LN SQ A+ L + + LI GPPGTGKT T + L+ + + K
Sbjct: 660 APNLAP-LNHSQIDAIKKSLN-------SPLSLIQGPPGTGKTLTCATLVYHMHKTKMGG 711
Query: 79 RTLVCTPTNVAIKELAAR-------VVKLVKESVERDCRDALFFPLGDILLLGNNER-LK 130
+ LV P+NVA+ +L+ R VV+L S E + D L L N + LK
Sbjct: 712 KVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRES------VSSIADYLYLHNQVKLLK 765
Query: 131 VDSGVE 136
D G E
Sbjct: 766 TDVGEE 771
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 13/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 634
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
+ L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 635 PWG--CLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 692
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 693 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 749
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 750 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 808
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ + I+GN + L+ K+ +W L++
Sbjct: 809 YGVIIVGNPKALS-KQPLWNHLLN 831
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 414 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 466
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 467 NIAVDQLTEKI 477
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L A E++LLE D++ C+ L+ + HS+ +IDE+ Q E E
Sbjct: 579 LKKACERELLEAADVICCTCVGAGDPRLA----RFKFHSI--------LIDESMQATEPE 626
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+P+ L G K +L GD CQL +V K + A +SLFERL LG L +QYRM
Sbjct: 627 CMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPLRLEVQYRM 685
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG--GREEFIEH-- 496
HP ++ FP+++FYE +++ +R R L P P + + G+EE
Sbjct: 686 HPQLAQFPSNFFYEGSLQNGVFADERRM--RGLDFPWPQPERPMLFYACQGQEEMAGSGT 743
Query: 497 SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI------QEKLGSKYVN 550
S N E ++V KI ++ + ++ +G+++PY Q + Q L SK
Sbjct: 744 SYLNRTEAALVEKICTRFLRSGVKPQQ---VGVITPYEGQRAYLVQHMQFQGALHSKLYQ 800
Query: 551 SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGN 610
++V S+D FQG E+DLI++S VRSN IGFL++ +R+NVALTRAR+ L I+GN
Sbjct: 801 E----IEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVALTRARYGLIIVGN 856
Query: 611 ARTLTRKKSVWEALV 625
+ L+ K+ +W L+
Sbjct: 857 PKVLS-KQPLWNHLL 870
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 21/109 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATVVYHLAKQSTGPVLVCAPS 504
Query: 87 NVAIKEL-------AARVVKLVKESVERDCRDALFFPLGDILLLGNNER 128
N+A+ +L RVV+L +S R+AL P+ L L N R
Sbjct: 505 NIAVDQLTEKVHQTGLRVVRLCAKS-----REALNSPV-SFLALHNQIR 547
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 146/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 619 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 677
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 678 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 736
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA + ++ IGI++PY Q +
Sbjct: 737 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 793
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 794 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 849
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L+ K+ +W L++
Sbjct: 850 RAKYGIIIVGNPKVLS-KQQLWNHLLN 875
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 457 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 509
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEI 138
N A+ +L ++ + V R C R+A+ P+ + L +K ++ ++++
Sbjct: 510 NTAVDQLTEKIHR-TNLKVVRVCAKSREAIDSPVSFLALHNQISNIKANTELKKL 563
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLIKL 669
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
+ L+ QYRMHP +S FP++ FY+ +++ T +R P+ P F +
Sbjct: 670 QLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRRDVEFPWPIAETPMMFWSN 729
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K + +KA + E IG+++PY Q +V +
Sbjct: 730 LGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQRSYIVTTMQ 786
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 787 NSGS-FKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 845
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+CF
Sbjct: 846 YGLVILGNPKVLS-KHELWHNLLVHFKDRKCF 876
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ A+ S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 449 LNQSQIDAIKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 501
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 502 NVAVDQLCERIHNTNLKVVRLTAKSRE 528
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 521 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 579
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 580 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 639
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 640 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 695
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 696 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 755
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+ L ILGN R+L R ++W L+ + C D
Sbjct: 756 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCLVEGTLD 792
Score = 53.5 bits (127), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 359 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 411
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 412 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 440
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+ L ILGN R+L R ++W L+ + C D
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCLVEGTLD 840
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 22/304 (7%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L S VE++LLE D++ + C L +++DEA Q E E
Sbjct: 589 LRSQVERELLENADVICTTCAGAGDPRLGKLR------------FKMVLVDEATQACEPE 636
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+ IP+ +G K +L GD QL +V K + +A F +SLFERL LG L +QYRM
Sbjct: 637 ALIPI-CNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRM 695
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HPS++ FP+ FY+ +++ T+ R P F G+EE S
Sbjct: 696 HPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFFYNSTGQEEISASGTSY 755
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF--AV 556
N E + KI+ +A + + IG+V+PY Q IQ+ L + SA ++
Sbjct: 756 LNRSEAINIEKIITYFLRAGLKGSQ---IGVVTPYEGQRAYIQQVLQRQTTLSAKMYESI 812
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
++ S+D FQG E+D I++S VRSN +GFL++ +R+NVALTRAR+ L I GNA+ L R
Sbjct: 813 EIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVLAR 872
Query: 617 KKSV 620
+V
Sbjct: 873 ATTV 876
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRT 80
P+L LN SQ QAV L Q + LI GPPGTGKT T + ++ L Q + +
Sbjct: 455 PNLPQ-LNHSQVQAVQKALEQ-------PLSLIQGPPGTGKTVTSATIIYHLARQHQGQV 506
Query: 81 LVCTPTNVAIKELAARV----VKLVKESVERDCRDALFFPL 117
LV P+N+A+ +LA ++ +K+V+ + R+ L+ P+
Sbjct: 507 LVTAPSNIAVDQLAEKIHLTGLKVVR--ILAKSRECLYSPV 545
>gi|393243189|gb|EJD50704.1| hypothetical protein AURDEDRAFT_83748 [Auricularia delicata TFB-10046
SS5]
Length = 2008
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 147/294 (50%), Gaps = 25/294 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
+VIDEAAQ E S IPL+ G K V+ GD QLP V SK + + +SLF R+
Sbjct: 1558 VVIDEAAQSIELSSLIPLRY-GCKRCVMVGDPQQLPPTVISKRATHFKYNQSLFVRIFER 1616
Query: 427 LGYSKHLL-------------------SIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
+ HLL SIQYRMHP IS P+ FY ++D + ++
Sbjct: 1617 KPKAAHLLRHVPNSSHPHLCRTQRLHHSIQYRMHPDISLIPSKLFYGGNLKDGPDMAAKT 1676
Query: 468 YEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
E+ + + G Y F N+ G E + S N EV + + + D
Sbjct: 1677 -EQPWHASELLGTYRFFNIAQGHHENAAVGLSLVNRAEVDAALALYEAFLSQYSDQDMSH 1735
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GS 584
IG++S Y AQ+ A+Q +Y + ++DGFQG E+D+II+S VR+
Sbjct: 1736 RIGVISMYKAQINALQRAFEGRYGADIKNKLDFNTVDGFQGQEKDIIILSCVRAGPRVTD 1795
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
IGF+ + +R+NV++TRAR L+ILG+A TL R W +V DA AR +A+
Sbjct: 1796 IGFVKDVRRLNVSITRARSSLFILGHAATLERGDDTWRQIVEDARARGFLVDAE 1849
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT------- 80
+N+ QA+A+L+ + A L+ GPPGTGKT T+ ++ + + +
Sbjct: 1312 VNEPQAKAILAS------KNAAGFLLVQGPPGTGKTWTICGMVGAFMSNRPKPATEIQAG 1365
Query: 81 --------------LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNN 126
L+C P+N I E+A R+ V +S R + +++ +G +
Sbjct: 1366 RAAAPASKPHPKKILICAPSNAGIDEVAKRLCDGVLDSSGRRV-------VPNVVRIGVD 1418
Query: 127 ERLKVDSGVEEIYLDYRVKR-LADCFAP 153
V++ V+ + LDY+V+R LA AP
Sbjct: 1419 S--SVNTSVKHLTLDYQVERKLAGPGAP 1444
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 27/275 (9%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + AVL GD QL S + EA F +S+FER +
Sbjct: 650 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 704
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMY-GPYS 482
+ + +L QYRMHP+IS F N FY +K+ + + + R ++ R ++ P Y P
Sbjct: 705 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDR-FDNRIINFFPDYTNPIM 763
Query: 483 FINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
FIN G E++ S N EV ++ +++ L I+ E IGI+SPY AQ
Sbjct: 764 FINC-DGTEQYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENE---IGIISPYQAQ---- 815
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
++L S+YV++ +KV +IDGFQG E++ II S VRSN +GF+++ KR+NVALTR
Sbjct: 816 -QELISQYVSTK---IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTR 871
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
A+ L I+GN TL K VW L+H R F
Sbjct: 872 AKRGLIIIGNIPTLVTSK-VWNMLIHQFYLRDALF 905
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-- 79
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K+R
Sbjct: 359 PNLSN-LNDYQTKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKYRFY 410
Query: 80 --------TLVCTPTNVAIK-------ELAARVVKLVKESVERDCRDAL 113
LVC +N A+ E V++V + +C D +
Sbjct: 411 NINRGEKKLLVCASSNNAVDVICLKLIEKGIPTVRVVADEQFENCSDKI 459
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+ L ILGN R+L R ++W L+ + C D
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCLVEGTLD 840
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|32490215|emb|CAE05958.1| OSJNBb0088C09.17 [Oryza sativa Japonica Group]
gi|116309413|emb|CAH66489.1| OSIGBa0076I14.10 [Oryza sativa Indica Group]
Length = 770
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 417 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 460
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 461 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 517
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 518 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 573
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 574 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 633
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 634 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 692
Query: 631 RQCFFN 636
R +F
Sbjct: 693 RGRYFQ 698
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 152/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 619 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 677
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
+ L++QYRMHP +S FP++ FYE +++ T +R + P+ P F +
Sbjct: 678 NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAERIRKDVDFPWPVADMPMMFWSN 737
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V K++ +KA + + IG+++PY Q +V+ +
Sbjct: 738 LGSEEISASGTSYLNRTEAANVEKVVTRFFKAGVKPSD---IGVITPYEGQRSYIVSTMQ 794
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 795 NTGT-FKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 853
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GN + L K +W L+ R+C
Sbjct: 854 YGLVIIGNPKVLA-KHELWHHLLVHFKDRKCL 884
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ + L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 457 LNHSQITAIKTVL-------STPLSLIQGPPGTGKTVTSATIIYHLCKMNNSQVLVCAPS 509
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 510 NVAVDQLCERIHRTGLKVVRLTAKSRE 536
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA + ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 845 RAKYGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 47.0 bits (110), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ L G + +L GD CQL +V K + A +SLFERL L
Sbjct: 616 VLIDESTQATEPECMIPVVL-GCRQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 674
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ R + + P F
Sbjct: 675 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLDIPWPQGDKPMFFYTT 734
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E + V KI ++ + ++ IGI++PY Q I + +
Sbjct: 735 SGQEEISSSGTSYLNRTEAANVEKIATRFLRSNVKPEQ---IGIITPYEGQRAYIVQYMQ 791
Query: 546 -SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S +N + ++V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++
Sbjct: 792 YSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 851
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ I+GN + L+ K+ +W L+ ++C
Sbjct: 852 GIIIVGNPKVLS-KQPLWNHLLTYYKEQKCL 881
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 454 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQNNGQVLVCAPS 506
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 507 NIAVDQLTEKIHK 519
>gi|300122269|emb|CBK22842.2| unnamed protein product [Blastocystis hominis]
Length = 586
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 149/271 (54%), Gaps = 25/271 (9%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHA--VLFGDECQLPAMVESKVSNEACFGRSLFE 422
L +++DEA Q E IPL +K + +L GD QL A + + +G+SLFE
Sbjct: 302 LPIVIVDEATQCTEPHCLIPL---CVKPSLFILVGDSHQLAATILNPTIKRLGYGKSLFE 358
Query: 423 RLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGP 480
RL + + L IQ+RM PSIS +PN Y Y++++ DS VR+ S+ F + P Y
Sbjct: 359 RLVLNKFPRLSLRIQFRMTPSISLWPNQYVYQSQLIDSKRVRQPSFCYIFQNSSVPSYAF 418
Query: 481 YSFINVFGGREEFIEHSC-------RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPY 533
V + I+ C N+ E +V+ ++ L+ S SIG++SPY
Sbjct: 419 LDVPEVLLFEFDAIQGICAKHRSSFHNLREAEIVVDLIHRLFLQLPPSTIGYSIGVISPY 478
Query: 534 SAQVVAIQEKLGSKYVNSAGFA-----VKVMSIDGFQGGEEDLIIISTVRS-----NNGG 583
+AQV I+ ++ S ++ A F VK+ S+D FQGGE D+II+S VRS
Sbjct: 479 TAQVHQIRNRMNS-VIDCAQFEKDLKLVKISSVDAFQGGESDIIILSCVRSTLKDAQAIK 537
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTL 614
S+GFLSN +R+NVALTRA+ LWI+GNA+ L
Sbjct: 538 SVGFLSNLQRLNVALTRAKQALWIVGNAQHL 568
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCX 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|57834047|emb|CAE05419.2| OSJNBa0035I04.7 [Oryza sativa Japonica Group]
Length = 744
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 391 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 434
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 435 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 491
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 492 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 547
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 548 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 607
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 608 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 666
Query: 631 RQCFFN 636
R +F
Sbjct: 667 RGRYFQ 672
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 142/254 (55%), Gaps = 6/254 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N +++DEA Q E E +PL ++G K VL GD CQL ++ K + + G+SLFERL
Sbjct: 23 FNQVLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERL 81
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSF 483
LG + L +QYRMHP +S FP+ FY+ +++ T+++R Y K F P F
Sbjct: 82 MMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 141
Query: 484 INVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS-IGIVSPYSAQVVAIQE 542
N G E + + M+IL+ +A ++S K + IG+++PY Q I
Sbjct: 142 YNSNGLEEMSASGTSYLNRNEAQNMEILV---RALLNSGLKATQIGVITPYEGQRAYITS 198
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA+
Sbjct: 199 LFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 258
Query: 603 HCLWILGNARTLTR 616
+ L I GNA+ L+R
Sbjct: 259 YGLIICGNAKVLSR 272
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 22/304 (7%)
Query: 323 LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESE 380
L S VE++LLE D++ + C L +++DEA Q E E
Sbjct: 145 LRSQVERELLENADVICTTCAGAGDPRLGKLR------------FKMVLVDEATQACEPE 192
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM 440
+ IP+ +G K +L GD QL +V K + +A F +SLFERL LG L +QYRM
Sbjct: 193 ALIPI-CNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRM 251
Query: 441 HPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SC 498
HPS++ FP+ FY+ +++ T+ R P F G+EE S
Sbjct: 252 HPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFFYNSTGQEEISASGTSY 311
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF--AV 556
N E + KI+ +A + + IG+V+PY Q IQ+ L + SA ++
Sbjct: 312 LNRSEAINIEKIITYFLRAGLKGSQ---IGVVTPYEGQRAYIQQVLQRQTTLSAKMYESI 368
Query: 557 KVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
++ S+D FQG E+D I++S VRSN +GFL++ +R+NVALTRAR+ L I GNA+ L R
Sbjct: 369 EIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVLAR 428
Query: 617 KKSV 620
+V
Sbjct: 429 ATTV 432
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFR 79
P+L LN SQ QAV L Q + LI GPPGTGKT T + ++ L Q + +
Sbjct: 10 APNLPQ-LNHSQVQAVQKALEQ-------PLSLIQGPPGTGKTVTSATIIYHLARQHQGQ 61
Query: 80 TLVCTPTNVAIKELAARV----VKLVKESVERDCRDALFFPL 117
LV P+N+A+ +LA ++ +K+V+ + R+ L+ P+
Sbjct: 62 VLVTAPSNIAVDQLAEKIHLTGLKVVR--ILAKSRECLYSPV 101
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 155/277 (55%), Gaps = 21/277 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 586 VLIDESTQASEPECLIPI-VKGAKQIILVGDHQQLGPVILERKAGDAGLKQSLFERLILL 644
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++ P F
Sbjct: 645 GHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTIEQRTIPGSTFPWPIHEVPMMFWAN 704
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +I+ L+K D + IG+++PY Q I + +
Sbjct: 705 YG-REEISANGTSFLNRIEAMNCERIITRLFK---DGVKPHQIGVITPYEGQRAYILQYM 760
Query: 545 ---GSK----YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
GS YVN V+V S+D FQG E+D II+S VR+N +IGFLS+ +R+NV
Sbjct: 761 QMNGSLDKELYVN-----VEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVG 815
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
LTRA++ L ILGN R+L+R +W L+ + C
Sbjct: 816 LTRAKYGLVILGNPRSLSR-NVLWNHLLIHFREKGCL 851
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCTPT 86
LN SQA AV L++ + LI GPPGTGKT T + ++ L + K R LVC P+
Sbjct: 426 LNASQASAVAHVLQK-------PLSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCAPS 478
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ LA+ +VV+L +S E
Sbjct: 479 NVAVDHLASKLRDLGLKVVRLTAKSRE 505
>gi|195435518|ref|XP_002065727.1| GK19858 [Drosophila willistoni]
gi|194161812|gb|EDW76713.1| GK19858 [Drosophila willistoni]
Length = 1890
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 166/313 (53%), Gaps = 37/313 (11%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
C++R+++ +T SS L S + + +IDEA Q E + +PL+ + H VL GD
Sbjct: 1570 CVRRSNIVCTTLSSCVKL-SRFINYFDICIIDEATQCTEPWTLLPLRF-AVNHLVLVGDT 1627
Query: 400 CQLPAMVESKVSNEACFGRSLFERL-------------SYLGYSKHL-LSIQYRMHPSIS 445
QLPA V S+ + + S+F+R+ S+L ++K LS+QYRMHP I
Sbjct: 1628 QQLPATVISQKAQDFGLANSMFDRVQRCLNDQLDKPGSSHLVHTKIFKLSMQYRMHPEIC 1687
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV-FGGREEFIE-HSCRNMVE 503
+PN YFYE+++ DS +R+ P+ PY IN+ F I S N E
Sbjct: 1688 RWPNRYFYEDQLVDSPCALRRT------QSPLI-PYCVINLSFTQDTNCINSRSVSNNDE 1740
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDG 563
V +L+ + K S +K G++SPYS+Q A+ E + A + ++D
Sbjct: 1741 ARFVANLLIEMDKHM--STKKYGYGLISPYSSQCYALSELI------PAEMKIIPTTVDS 1792
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
+QG E+D+I+IS R+ GFL+N +R+NVALTRA+ CL I GN L + +W A
Sbjct: 1793 YQGTEKDIIVISNARTR---GCGFLTNYQRLNVALTRAKRCLIICGNFDDL-QSVDMWRA 1848
Query: 624 LVHDANARQCFFN 636
L++DA R +F+
Sbjct: 1849 LLNDARDRGVYFD 1861
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
+++ Q V+ +++ D A+I LI GPPGTGK+ +S L + L + + L
Sbjct: 1382 VSEHQRDIVMQTSQRVIDDGNASITLIQGPPGTGKSMVLSNLCLQCLYGDTANKRDRKIL 1441
Query: 82 VCTPTNVAIKELAARVVKLVKESVERDCRDALFF 115
+C +N A+ +A+ ++ +++ + R+ D L F
Sbjct: 1442 ICAHSNTAVDNIASYLLN-IRQKMSREKFDILRF 1474
>gi|297723147|ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa Japonica Group]
Length = 836
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 458 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 501
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 502 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 558
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 559 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 614
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 615 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 674
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 675 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 733
Query: 631 RQCFFN 636
R +F
Sbjct: 734 RGRYFQ 739
>gi|108709046|gb|ABF96841.1| expressed protein [Oryza sativa Japonica Group]
Length = 770
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 417 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 460
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 461 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 517
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREE-FIEHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 518 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 573
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 574 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKE 633
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 634 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 692
Query: 631 RQCFFN 636
R +F
Sbjct: 693 RGRYFQ 698
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE+ Q E E IPL L G K VL GD CQL ++ K + A +SLFERL L
Sbjct: 910 VLVDESTQATEPECLIPLVL-GAKQLVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 968
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP++ FYE +++ T R + P+ F V
Sbjct: 969 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDFPWPVPNRPMFFYVQ 1028
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E V KI+ K+ + + IG+++PY Q I +
Sbjct: 1029 MGQEEISASGTSYLNRGEAGNVEKIVTTFLKSGVVPAQ---IGVITPYEGQRAYIVNNMA 1085
Query: 546 --SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
++V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRAR
Sbjct: 1086 RNGSLRQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTRARF 1145
Query: 604 CLWILGNARTLTRKKSVWEALV 625
+ ILGN + L+ K+ +W L+
Sbjct: 1146 GIVILGNPKVLS-KQPLWNTLL 1166
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKF 78
FG LN SQ AV S L++ + LI GPPGTGKT T + ++ L Q +
Sbjct: 738 FGAPGLPELNASQVYAVKSVLQK-------PVSLIQGPPGTGKTVTSAAIVYHLAKQGQG 790
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
+ LVC P+NVA+ +LA + + V R C + R V S VE +
Sbjct: 791 QVLVCAPSNVAVDQLAEK-ISATGLKVVRLCAKS---------------REAVSSPVEHL 834
Query: 139 YLDYRVKRL 147
L Y+V+ L
Sbjct: 835 TLHYQVRHL 843
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL G+K V+ GD QL + SK + A +SLFERL L
Sbjct: 621 VLIDEATQATEPECMIPLTF-GVKQLVMVGDHSQLGPTIMSKKAARAGLTQSLFERLVLL 679
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P + +
Sbjct: 680 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMYFHQN 739
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL- 544
G+EE N E + V K++ L+K+ + + IGIV+PY Q I +
Sbjct: 740 LGQEEISSSGTSFLNRTEAANVEKVVTRLFKSGVMPHQ---IGIVTPYEGQRAYIANYML 796
Query: 545 -GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA++
Sbjct: 797 FNGSLKKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGIGFLNDPRRLNVALTRAKY 856
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K ++W L+ + C
Sbjct: 857 GLVILGNPKVLS-KHALWHYLLTHYKEKGCL 886
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L M + + LV P+
Sbjct: 459 LNHSQVYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLATMSQGQVLVTAPS 511
Query: 87 NVAIKELAARV 97
NVA+ +L ++
Sbjct: 512 NVAVDQLTEKI 522
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 618 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 676
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
++ L +QYRMHP +S FP++ FYE +++ T +R + P+ P F +
Sbjct: 677 QFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSN 736
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IG+++PY Q +V +
Sbjct: 737 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPAD---IGVITPYEGQRSYIVNTMQ 793
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 794 NTGT-FKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 852
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GN + L K +W L+ ++C
Sbjct: 853 YGLVIIGNPKVLC-KHELWHHLLVHFKDKKCL 883
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 456 LNASQIAAIKQVLSN-------PLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPS 508
Query: 87 NVAIKELAARV 97
NVA+ +L R+
Sbjct: 509 NVAVDQLCERI 519
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 162/320 (50%), Gaps = 20/320 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G+K V GD QL + +K + A +S+FERL L
Sbjct: 642 VLIDEATQATEPECMIPLTL-GVKQVVFVGDHQQLGPTIMNKKAARAGLTQSMFERLVLL 700
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P +
Sbjct: 701 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMCFHCN 760
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E S V K++ +KA + + IGIV+PY Q I
Sbjct: 761 LGQEEISSSGTSFLNRTEASNVEKVVTRFFKAGVLPSQ---IGIVTPYEGQRSYI----- 812
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y+ + G ++V S+D FQG E+D II+S VRSN+ IGFL++ +R+NVAL
Sbjct: 813 VTYMQTNGTLKKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLNDPRRLNVAL 872
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRA++ + +LGN + L+ K ++W L+ + C + +L +++ + K LD
Sbjct: 873 TRAKYGVVVLGNPKVLS-KHALWHFLLTAYKEKSCLVEGPLN-NLQASLVQLSKPRKPLD 930
Query: 659 ELLNPESRLFRSQRWKVNFS 678
P +R + R N S
Sbjct: 931 RADLPVNRFEPNPRELPNLS 950
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + L+ GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 480 LNHSQVSAVKSVLQK-------PLSLVQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPS 532
Query: 87 NVAIKELAARV----VKLVKESVERDCRDAL 113
NVA+ +L ++ +K+V+ V+ R+A+
Sbjct: 533 NVAVDQLTEKIHLTGLKVVR--VQAKSREAI 561
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 596 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 654
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 655 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 714
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 715 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 771
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 772 LTGTFKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 831
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 832 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 861
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 434 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 486
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 487 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 520
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 170/343 (49%), Gaps = 22/343 (6%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASL--FLSTASS 353
+ Y + S H L KLQ +EL S+ D K LKRA+ L +A
Sbjct: 564 LHYQVAHLDSPEHAELAKLQQLKDELGELSS------NDERKYRALKRATEREILQSADV 617
Query: 354 SYMLHSVAMEP--LNF----LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
A +P NF +++DE+ Q E E IPL + G K V+ GD CQL +V
Sbjct: 618 VCTTAVGAGDPRLANFRFRQVLMDESTQATEPECLIPL-IMGAKQVVMVGDHCQLGPVVA 676
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
K + A G+SLFERL LG L +QYRMHP +S FP++ FYE +++ +R
Sbjct: 677 CKKAARAGLGQSLFERLILLGVQPIRLQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERL 736
Query: 468 YEKRFLHGPMYG-PYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKL 525
P P F ++ G E S N E V KI+ + +A + +
Sbjct: 737 MTHVNFPWPKPSTPMMFWSMTGAEEISASGTSYLNRTEAVSVEKIVTHFLRAGVAPE--- 793
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGG 583
++G+V+PY Q + + + V ++V S+D FQG E+D II+S VRSN
Sbjct: 794 ALGVVTPYEGQRAYVVQHMTRAGVLRQQLYNEIQVASVDSFQGREKDFIILSCVRSNEKA 853
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFL++ +R+NVA+TRAR L ILGN + L+R+ + L H
Sbjct: 854 GIGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQPLFHDLLQH 896
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 14/100 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV S LR+ + LI GPPGTGKT T + ++ L Q + + +VC P+
Sbjct: 474 LNHSQVNAVASVLRR-------PLSLIQGPPGTGKTVTSATIVYHLAQQNQGQVIVCAPS 526
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL 122
NVA+ +LA ++ +K+V+ V R+A+ P+ + L
Sbjct: 527 NVAVDQLAEKIEQTGLKVVR--VAAKSREAVLSPVEHLTL 564
>gi|297605680|ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa Japonica Group]
Length = 1029
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 488 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 531
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 532 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 588
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 589 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 644
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 645 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKE 704
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 705 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 763
Query: 631 RQCFFN 636
R +F
Sbjct: 764 RGRYFQ 769
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 143/264 (54%), Gaps = 9/264 (3%)
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+++IDEA Q E E+ +PL + G K L GD CQL +V S + A RSLFERL
Sbjct: 547 QYVLIDEATQGTEPETLVPL-VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLL 605
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
G+ L +QYRMHP++S FP+ FYE +++ T +R + F P F N
Sbjct: 606 MTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPIFFYN 665
Query: 486 VFGGREEFIEHSCR-NMVEVSVVMKILLNLYKAWIDSKEKLS-IGIVSPYSAQVVAIQEK 543
G E S N E ++ +I+ L + D K K IG+++PY Q +
Sbjct: 666 TTGSEELSANGSSYLNRAEAALTERIITKLIR---DGKVKPDDIGVITPYGGQCRYVMNY 722
Query: 544 L--GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
L +A V+V S+D FQG E++ II+S VRSN+ IGF+ + +R+NV++TRA
Sbjct: 723 LVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRA 782
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
+ L I+GN + L+R + W AL+
Sbjct: 783 KRGLIIMGNVQLLSRYPA-WHALL 805
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCT 84
S LN SQ AV + LR + LI GPPGTGKT T V+++L + L+++ + LVC
Sbjct: 381 SNLNSSQDTAVRTALRN-------PLTLIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCA 433
Query: 85 PTNVAIKELAARV 97
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 579 VLIDESTQATEPECLIPI-IKGAKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL 637
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++ P F
Sbjct: 638 GHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHDVPMMFWAN 697
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 698 YG-REELSSNGTSYLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 753
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N+ +IGFL + +R+NV LTRA+
Sbjct: 754 QMNGSLDKEMYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAK 813
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L+ K +W L+ + C
Sbjct: 814 YGLVILGNPRSLS-KNILWNHLLLHFREKGCL 844
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LNDSQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 417 TQLNDSQSNAVQHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKERVLVCA 469
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 470 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 498
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 284 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 342
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 343 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 401
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA + ++ IGI++PY Q +
Sbjct: 402 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 458
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 459 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 514
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + I+GN + L K+ +W L++
Sbjct: 515 RAKYGIIIVGNPKVLA-KQQLWNHLLN 540
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L++ T LVC P+
Sbjct: 122 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 174
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 175 NTAVDQLTEKI 185
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 154/277 (55%), Gaps = 21/277 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G +L GD QL ++ + + +A +SLFERL L
Sbjct: 566 VLIDESTQASEPECLIPI-VKGAIQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL 624
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++ P F
Sbjct: 625 GHVPLRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHEVPMMFWAN 684
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +I+ L+K D + IG+++PY Q I + +
Sbjct: 685 YG-REEISANGTSYLNRIEAMNCERIITRLFK---DGVKPEQIGVITPYEGQRAYILQYM 740
Query: 545 ---GSK----YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
GS YVN V+V S+D FQG E+D II+S VR+N+ SIGFLS+S+R+NV
Sbjct: 741 QMNGSLDTDLYVN-----VEVASVDAFQGREKDYIILSCVRANDQQSIGFLSDSRRMNVG 795
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
LTRA++ L ILGN R L+ +W L+ + C
Sbjct: 796 LTRAKYGLVILGNPRALS-TNVLWNNLLIHFREKGCL 831
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 404 APLNASQSHAVEHALQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKDRILVCA 456
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L S E
Sbjct: 457 PSNVAVDHLAAKLRMLGLKVVRLTARSRE 485
>gi|297601165|ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group]
gi|255674627|dbj|BAF12371.2| Os03g0440200 [Oryza sativa Japonica Group]
Length = 824
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 152/306 (49%), Gaps = 27/306 (8%)
Query: 334 DLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKH 392
D ++S L A++ ST S S + S + ++IDEAAQ
Sbjct: 458 DRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA---------------- 501
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYF 452
GD QLPA V S + + +G SLF+R G+ +L IQYRMHP IS FP+ F
Sbjct: 502 ---VGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEF 558
Query: 453 YENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKI 510
YE + D + K KR H +GP+ F +V G + S N EV + +
Sbjct: 559 YEGVLEDGEGLSK----KRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLL 614
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
+ + + K + ++SPY QV +++ S + + + + V ++DGFQG E++
Sbjct: 615 YHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKE 674
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
++I S VR N IGF+S+ +R+NVA+TRAR + ++G+A TL K W LV A
Sbjct: 675 VVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKH-WNNLVESAKE 733
Query: 631 RQCFFN 636
R +F
Sbjct: 734 RGRYFQ 739
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA+ + I+GN + L K+ +W L++
Sbjct: 845 RAKFGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 9/265 (3%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+++IDEA Q E E+ +PL + G K L GD CQL +V S A RSLFERL
Sbjct: 546 FQYVLIDEATQGTEPETLVPL-VRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSLFERL 604
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G+ L +QYRMHP++S FP+ FYE +++ T +R + F P F
Sbjct: 605 LLTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASQVFPWPDPTRPIFFY 664
Query: 485 NVFGGREEFIEHSCR-NMVEVSVVMKILLNLYKAWIDSKEKL-SIGIVSPYSAQVVAIQE 542
N G E S N E ++ +I+ L + D K K IG+++PY Q +
Sbjct: 665 NTTGSEEVSANGSSYLNRAEAALTERIITKLIQ---DGKVKPDDIGVITPYGGQCRYLMN 721
Query: 543 KL--GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
L +A +V+V S+D FQG E++ II+S VRSN+ IGF+ + +R+NV++TR
Sbjct: 722 YLLRCGPLPKTAYESVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITR 781
Query: 601 ARHCLWILGNARTLTRKKSVWEALV 625
A+ L I+GN + L+R VW AL+
Sbjct: 782 AKRGLIIMGNVQLLSR-YPVWHALL 805
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCT 84
S LN SQ AV + LR + LI GPPGTGKT T V+++ + + + LVC
Sbjct: 381 SNLNSSQDAAVRTALRN-------PLTLIQGPPGTGKTSTSVAIVRELHRRTHSQILVCA 433
Query: 85 PTNVAIKELAARV 97
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 143/264 (54%), Gaps = 9/264 (3%)
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
+++IDEA Q E E+ +PL + G K L GD CQL +V S + A RSLFERL
Sbjct: 547 QYVLIDEATQGTEPETLVPL-VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLL 605
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
G+ L +QYRMHP++S FP+ FYE +++ T +R + F P F N
Sbjct: 606 MTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPIFFYN 665
Query: 486 VFGGREEFIEHSCR-NMVEVSVVMKILLNLYKAWIDSKEKLS-IGIVSPYSAQVVAIQEK 543
G E S N E ++ +I+ L + D K K IG+++PY Q +
Sbjct: 666 TTGSEELSANGSSYLNRAEAALTERIITKLIR---DGKVKPDDIGVITPYGGQCRYVMNY 722
Query: 544 L--GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
L +A V+V S+D FQG E++ II+S VRSN+ IGF+ + +R+NV++TRA
Sbjct: 723 LVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRA 782
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
+ L I+GN + L+R + W AL+
Sbjct: 783 KRGLIIMGNVQLLSRYPA-WHALL 805
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 8/73 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCT 84
S LN SQ AV + LR + LI GPPGTGKT T V+++L + +++ + LVC
Sbjct: 381 SNLNSSQDTAVRTALRN-------PLTLIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCA 433
Query: 85 PTNVAIKELAARV 97
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 18/267 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP+++FYE +++ R + F P F+ V
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA------QVVA 539
G+EE N E + V KI KA I ++ IGI++PY Q +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 540 IQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
Q L S+ +++ S+D FQG E+D+II+S VRSN IGFL++ +R+NVALT
Sbjct: 789 YQGSLHSRLYQE----IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALT 844
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA+ + I+GN + L K+ +W L++
Sbjct: 845 RAKFGIIIVGNPKVLA-KQQLWNHLLN 870
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT-LVCTPT 86
LN SQ AV L++ + LI GPPGTGKT T + ++ L+++ T LVC P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 87 NVAIKELAARV 97
N A+ +L ++
Sbjct: 505 NTAVDQLTEKI 515
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 145/254 (57%), Gaps = 10/254 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVQL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L +QYRMHP +S FP++ FYE +++ T+ +R P+ P F +
Sbjct: 673 GQNPIRLDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIRCDVDFPWPVSDTPMMFWSN 732
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + IG+++PY Q VV+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQPAD---IGVITPYEGQRSYVVSSMQ 789
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 790 NTGT-FKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 848
Query: 603 HCLWILGNARTLTR 616
+ L ILGN + L++
Sbjct: 849 YGLVILGNPKVLSK 862
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 16/96 (16%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN+SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 452 LNNSQINAVKSVLQK-------PLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPS 504
Query: 87 NVAIKELAAR-------VVKLVKESVERDCRDALFF 115
NVA+ +L R VV+L +S E D + ++ F
Sbjct: 505 NVAVDQLCERIHRTGLKVVRLTAKSRE-DVQSSVGF 539
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 183/385 (47%), Gaps = 37/385 (9%)
Query: 310 VLRKLQSSFNELN------------LPSAVEKDLLE--DLLKSFCLKRASLFLSTASSSY 355
VL+KLQ NE L E++LLE D++ + C+ L +
Sbjct: 565 VLQKLQQLKNETGELSMDDEKRYSVLKKVAEQELLEAADVICTTCVGAGDPRLM----QF 620
Query: 356 MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
HS+ +IDE+ Q E E +P+ + G++ +L GD CQL +V K + A
Sbjct: 621 KFHSI--------LIDESVQATEPECMVPV-VHGVQQLILVGDHCQLGPVVTCKKAANAG 671
Query: 416 FGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
+SLFERL LG L +QYRMHP +S F +++FYE +++ R K
Sbjct: 672 LTQSLFERLVVLGIRPFRLEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIEFPW 731
Query: 476 PMYGPYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPY 533
P+ G EE S N E + V I + + + IGI++PY
Sbjct: 732 PVADEPMLFYATLGHEEIAGSGTSYLNRTEAANVEHIATRFLRCGVRPDQ---IGIITPY 788
Query: 534 SAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
Q + + + + A +++ S+D FQG E+D II+S VRSN IGFL++
Sbjct: 789 EGQRAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGIGFLNDP 848
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVK 651
+R+NVALTRA++ L I+GN + L+ KK +W L++ A+ + +L + + +
Sbjct: 849 RRLNVALTRAKYGLLIVGNPKVLS-KKQLWNHLLNYYKAKNVLVEGPLN-NLKPSPIQLP 906
Query: 652 KELDELDELLNPESRLFRSQRWKVN 676
K +L +NP S +Q + +
Sbjct: 907 KP-KQLKSTINPGSYFMTTQMYNAH 930
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FR 79
P+L LN SQ +AV +++ + LI GPPGTGKT T + ++ L+ +
Sbjct: 457 APNLPD-LNRSQVKAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVTINGGP 508
Query: 80 TLVCTPTNVAIKELAARV 97
LVC P+N+A+ +L ++
Sbjct: 509 VLVCAPSNIAVDQLTEKI 526
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 154/273 (56%), Gaps = 13/273 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL ++ K + +A +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP++S FP++ FYE +++ T +R P+ P F +
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGIDWQWPVPDKPMMFWSC 715
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
+G +EE S N E + V K+ KA I ++ IGI++PY Q +V
Sbjct: 716 YG-QEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQ---IGIITPYEGQRSYIVQFM 771
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ G+ + + ++V ++D FQG E+D+II++ VRSN+ IGFL++S+R+NVALTRA
Sbjct: 772 QTQGALH-SKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRA 830
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GNA+ L+R +W L+ + C
Sbjct: 831 KFGLIIVGNAKVLSR-HPLWNYLLSVFKEKGCL 862
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 27/134 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 435 LNHSQVHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPS 487
Query: 87 NVAIKELAA-------RVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
N+A+ +LA +VV+L +S R+ L P + L + +LK G E++
Sbjct: 488 NIAVDQLAEKIHRTGLKVVRLCAKS-----RETLDSP---VAFLALHNQLKALHGAAELH 539
Query: 140 ----LDYRVKRLAD 149
L + LAD
Sbjct: 540 KLQQLKEEIGELAD 553
>gi|118366801|ref|XP_001016616.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89298383|gb|EAR96371.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 834
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 16/304 (5%)
Query: 341 LKRASLFLSTASS--SYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
LK A + T SS S +L S + + +VIDEAAQ E + IPLQ + +L GD
Sbjct: 509 LKEAKIICGTLSSTGSQILASANFK-FDTVVIDEAAQSTEISTLIPLQYQCTR-LILIGD 566
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLPA + SK + + +SLFER H+L+ QYRM+P IS F + FY++KI
Sbjct: 567 HNQLPATIFSKKCEKFNYHQSLFERFEKCKVEVHMLNQQYRMNPIISKFISQTFYQDKIS 626
Query: 459 DSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAW 518
D+ + + + ++ P F NV G E F + S +N E +++I N +
Sbjct: 627 DAEKINELVGQPEIYQLRLFQPVVFFNV-EGNEIFEKSSYKNEEESKAIVEI-YNKLRTT 684
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ + +GI++ YS QV I++K+ + + + V+V ++DGFQG E+D+II STVR
Sbjct: 685 FPNFDLNKLGIITAYSRQVKEIEKKIKA-HDKTDKCMVEVHTVDGFQGREKDIIIFSTVR 743
Query: 579 S-------NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV-HDANA 630
+ N +IGFL++ +R+NV+L+RAR C+ ++G+ + L K +W+ L +
Sbjct: 744 ASQVNGEKNTKKTIGFLNDRRRMNVSLSRARLCVIVVGDLKQLKFSK-LWKGLAEYSIEQ 802
Query: 631 RQCF 634
R C+
Sbjct: 803 RSCY 806
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 19/279 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFERL L
Sbjct: 607 VLIDESTQATEPEILVSI-MRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLL 665
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FY+ +++ T R H P +F
Sbjct: 666 GIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHC 725
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VVA 539
G EE N E + V K++ L KA + + IG+++PY Q +
Sbjct: 726 SGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQ---IGVITPYEGQRSFIVNYMH 782
Query: 540 IQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Q L SK Y N V++ S+D FQG E+D II++ VRSN+ IGFLS+ +R+NVA+
Sbjct: 783 TQGTLNSKLYEN-----VEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAI 837
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
TRA++ L ++GNA+ L R +W L++ +++ +
Sbjct: 838 TRAKYGLVLVGNAKVLAR-HDLWHELINHYKSKEMLYEG 875
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCTPT 86
LN SQ QAV L + + LI GPPGTGKT + ++ L+Q + LVC+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 87 NVAIKELAARVVK 99
N+A+ LA ++ K
Sbjct: 499 NIAVDHLAEKIHK 511
>gi|237841007|ref|XP_002369801.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|211967465|gb|EEB02661.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|221483688|gb|EEE22000.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii GT1]
gi|221504290|gb|EEE29965.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii VEG]
Length = 1193
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 155/272 (56%), Gaps = 18/272 (6%)
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ A E + +VIDEA+Q E + IPL+L G + +L GD QLPA + S+V+ + + +
Sbjct: 833 AAATEAFDTVVIDEASQGVEMSTLIPLRL-GCRRLILVGDPRQLPATIFSRVAIQHRYDQ 891
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PM 477
SLF+RL G+ ++LS+QYRMHP IS F +S FY+N+++D+ + + P+
Sbjct: 892 SLFQRLEAAGHKVNMLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPI 951
Query: 478 YGPYSFINVFGGREEFIEHSCRNMVEVSVV---MKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ P F + E S N+ E + V + +L ++ A + + + I+SPY+
Sbjct: 952 FKPLVFFAINTSHTEE-NTSLINVDEANFVCQLVDLLKRIFVALGRTDWEGKLAIISPYA 1010
Query: 535 AQVVAIQEKLGS--KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN----------G 582
QV +++++ + + ++ + V ++DGFQG E+DLII S VR+
Sbjct: 1011 QQVSLLRQRIKAQLRITDNKACPIDVNTVDGFQGQEKDLIIFSAVRAQYTNPTTAQTKLN 1070
Query: 583 GSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
SIGFL++ +R+NVALTR R LWI+GN R L
Sbjct: 1071 TSIGFLADERRINVALTRGRTNLWIVGNGRFL 1102
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 168/324 (51%), Gaps = 20/324 (6%)
Query: 311 LRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVI 370
L KL+ + EL+ L+ +++ L+ A + T +++ V+ + ++I
Sbjct: 476 LLKLKDAVGELSEADEKRFRTLQRIIEQELLRSADVICCTCAAAGD-RRVSGQTFRTVLI 534
Query: 371 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS 430
DEA Q E E +PL L G + V+ GD CQL +V K + A +SLFER LG
Sbjct: 535 DEATQSTEPECMLPLVL-GTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVLLGIR 593
Query: 431 KHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGR 490
L +QYRMHP +S FP++ FYE +++ T +R P+ G+
Sbjct: 594 PVRLQVQYRMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFYASMGQ 653
Query: 491 EEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY 548
EE S N E + V K++ K+ + ++ IGIV+PY Q I +Y
Sbjct: 654 EEISASGTSYLNRTEAANVEKMVTRFLKSGVTPEQ---IGIVTPYEGQRAYI-----VQY 705
Query: 549 VNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
++ G AV+V S+D FQG E+D II+S RSN IGFL++ +R+NVALTRA
Sbjct: 706 MSFNGTLRQPLYEAVEVASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRA 765
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
++ + I+GN + L+ K+++W L+
Sbjct: 766 KYGIIIVGNPKVLS-KQALWNNLL 788
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ +A+ + L++ + LI GPPGTGKT T + L+ L+Q K + LVC P+
Sbjct: 370 LNHSQIEAIRAVLQR-------PLSLIQGPPGTGKTVTSASLVYHLVQQKHGKVLVCAPS 422
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 423 NIAVDQLTEKI 433
>gi|321264612|ref|XP_003197023.1| hypothetical protein CGB_L2150W [Cryptococcus gattii WM276]
gi|317463501|gb|ADV25236.1| hypothetical protein CNBL1770 [Cryptococcus gattii WM276]
Length = 2184
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 166/315 (52%), Gaps = 24/315 (7%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQ--------LSG--I 390
LK A + +T S + ++A ++IDEAAQ E IPL+ + G I
Sbjct: 1660 LKDADIICATLSGAGH-DTLAAHTFETVIIDEAAQAIEMSCLIPLKYGCKRCIMVGGNLI 1718
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPN 449
H V D QLP S + + + +SLF R++ S LLSIQYRMHP IS P+
Sbjct: 1719 LHPVSLTDPNQLPPTTFSANAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPS 1778
Query: 450 SYFYENKIRDSSTVRKRS---YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSV 506
FY +++D ++ K++ + +R + +GPY F N+ G E S +N E
Sbjct: 1779 KVFYHGQLKDGPSMAKKTAAIWHQRNI----FGPYRFFNI-EGTEMKTGTSTKNPAEALA 1833
Query: 507 VMKILLNLYKAWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
+++ L A ++ L+ IG++S Y Q+ ++ K + ++ V+ ++DGF
Sbjct: 1834 AVELYRRL-NADFGTRVNLAMRIGVISMYREQLWELKRKFTEAFGSTILELVEFNTVDGF 1892
Query: 565 QGGEEDLIIISTVRSN-NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
QG E+D+II+S VRS N IGFL +++R+NVALTRA+ L+I GN TL R W+
Sbjct: 1893 QGQEKDIIILSCVRSGPNLNHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKI 1952
Query: 624 LVHDANARQCFFNAD 638
+V DA R F N D
Sbjct: 1953 IVQDARDRGFFINYD 1967
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 19/85 (22%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
+LN+ QA+AVL L ++R LI GPPGTGKTKT+S L+ +
Sbjct: 1451 SLNEPQAKAVLGAL-EVRG-----FALIQGPPGTGKTKTISGLVGKWMSERRIPISVDGQ 1504
Query: 76 --MKFRTLVCTPTNVAIKELAARVV 98
+K + LVC P+N AI E+ R++
Sbjct: 1505 PPVKPKLLVCAPSNAAIDEVCKRLI 1529
>gi|401399876|ref|XP_003880657.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
gi|325115068|emb|CBZ50624.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
Length = 1244
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 155/272 (56%), Gaps = 18/272 (6%)
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR 418
+ A E + +VIDEA+Q E + IPL+L G + +L GD QLPA + S+V+ + + +
Sbjct: 884 AAATEAFDTVVIDEASQGVEMSTLIPLRL-GCRRLILVGDPRQLPATIFSRVAIQHRYDQ 942
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPM 477
SLF+RL G+ ++LS+QYRMHP IS F +S FY+N+++D+ + + P+
Sbjct: 943 SLFQRLEAAGHKVNMLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPI 1002
Query: 478 YGPYSFINVFGGREEFIEHSCRNMVEVSVV---MKILLNLYKAWIDSKEKLSIGIVSPYS 534
+ P F + E S N+ E + V + +L ++ A + + + ++SPY+
Sbjct: 1003 FKPLVFFAINTSHTEE-NTSLVNVDEANFVCQLVDLLKRIFVALGQTDWEGKVAVISPYA 1061
Query: 535 AQVVAIQEKLGS--KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG--------- 583
QV +++++ + + ++ + V ++DGFQG E+DLII S VR+
Sbjct: 1062 QQVSLLRQRIKAQLRITDNKPCPIDVNTVDGFQGQEKDLIIFSAVRAQYTSPTTAATKLD 1121
Query: 584 -SIGFLSNSKRVNVALTRARHCLWILGNARTL 614
SIGFL++ +R+NVALTR R LWI+GN R L
Sbjct: 1122 TSIGFLADERRINVALTRGRTNLWIVGNGRFL 1153
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP L G + VL GD CQL +V K + A +SLFERL L
Sbjct: 849 VLIDESTQSTEPECLIPAVL-GSRQLVLVGDHCQLGPVVMCKKAANAGLCQSLFERLVVL 907
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHPS+S FP++ FYE +++ T +R P F
Sbjct: 908 GIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVDFPFPQPDKPMFFYAT 967
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE S N E S V K+ +A + ++ IGI++PY Q I + +
Sbjct: 968 TGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPEQ---IGIITPYEGQRAFIVQYMQ 1024
Query: 546 -SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S +N + V++ S+D FQG E+D II+S VR+N+ IGFL++ +R+NVALTR R+
Sbjct: 1025 YSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDPRRLNVALTRGRY 1084
Query: 604 CLWILGNARTLTRKKSVWEALV 625
+ I+GN + L+R +W L+
Sbjct: 1085 GVIIVGNPKVLSR-HPLWNHLL 1105
Score = 47.8 bits (112), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCTPT 86
LN SQ AV + L + + LI GPPGTGKT T S++ + Q + LVC P+
Sbjct: 687 LNHSQVSAVRTVLTR-------PLSLIQGPPGTGKTVTSASIVYHLAKQGTGQVLVCAPS 739
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 740 NIAVDQLTEKIHK 752
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E IPL + G K V GD QL ++ +K A +SLFERL L
Sbjct: 641 VLVDEATQAAEPECMIPLVM-GCKQVVFVGDHLQLGPVIMNKKVARAGASQSLFERLIML 699
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP +S FP++ FYE +++ T +R + P+ P F
Sbjct: 700 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQN 759
Query: 487 FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI--QE 542
G +EE N E S V KI+ +KA + + IGIV+PY Q I
Sbjct: 760 LG-QEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYIVNHM 815
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+L V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRAR
Sbjct: 816 QLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAR 875
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L K +W L+ + C
Sbjct: 876 YGLVILGNPKVLN-KHPLWHYLLVHYKEKGCL 906
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M LVC P+
Sbjct: 479 LNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPS 531
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL---LGNNE 127
NVA+ +L ++ +K+V+ + + R+AL P+ + L + NN+
Sbjct: 532 NVAVDQLTEKIHMTGLKVVRLTAK--SREALDSPISFLTLHEQVANND 577
>gi|320589505|gb|EFX01966.1| tRNA-splicing [Grosmannia clavigera kw1407]
Length = 2062
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 181/369 (49%), Gaps = 54/369 (14%)
Query: 303 RRSECHFVLRKLQSSFNELN-----LPSAVEKD------------LLEDLLKSFCLKRAS 345
RRS+ V+ +LQ +EL + + +E+D + ++ L A
Sbjct: 1486 RRSDDRDVMNRLQREHDELRSEQRRIGAQIERDKESGNTYARETEIKRRQIQQKILNEAH 1545
Query: 346 LFLSTASSSY--MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLP 403
+ +T S S + ++ +E +VIDEAAQ E + IPL+ G +L GD QLP
Sbjct: 1546 VLCATLSGSGHDIFKNLNVE-FETVVIDEAAQCVELSALIPLKY-GCAKCILVGDPKQLP 1603
Query: 404 AMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSST 462
V S+ + + +SLF R+ HLL QYRMHP IS FP+ FYE ++ D +
Sbjct: 1604 PTVLSQSAARYGYDQSLFVRMQRNRPQDVHLLDTQYRMHPDISRFPSRQFYEGRLIDGAD 1663
Query: 463 VRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMV---EVSVVMKILLNLYKAWI 519
+ R + + P+ GPY F +V G +E+ H R++V EV V ++ L ++A
Sbjct: 1664 M-ARLRAQPWHANPLLGPYRFFDVSGAQEK--GHRGRSLVNENEVGVALQ-LYRRFRAVY 1719
Query: 520 DSKEKLS----------IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
S + S IGI++PY AQ+ A++ + S++ + AV+ + D FQG E
Sbjct: 1720 GSGPQTSRGDDDEAGPKIGIITPYKAQLQALRSRFSSQFGDDILQAVEFNTTDAFQGREC 1779
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
D+II S+ +NV LTRAR LWILG++R L R+ W AL+ DA
Sbjct: 1780 DIII--------------FSHPPHLNVGLTRARSSLWILGDSRAL-RQGEFWHALIEDAK 1824
Query: 630 ARQCFFNAD 638
R + D
Sbjct: 1825 GRGEYTGGD 1833
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 32/116 (27%)
Query: 53 LIWGPPGTGKTKTVSMLLVILLQMKFRT-----------------------LVCTPTNVA 89
L+ GPPGTGKTKT+ ++ LL +T LVC P+N A
Sbjct: 1324 LVQGPPGTGKTKTIVAMVGALLTGTIKTNAAAVAVSRPGANGHGDSTTKKLLVCAPSNAA 1383
Query: 90 IKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
+ EL R+ V+E+ +++ LG +E ++SGV+++ L+ VK
Sbjct: 1384 VDELVLRLKMGVRETTG-------ALRKINVVRLGRSE--AINSGVKDVTLEELVK 1430
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 660 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 719
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 720 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 776
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 777 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 836
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 837 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 866
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 439 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 491
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 492 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 525
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 660 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 719
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 720 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 776
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 777 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 836
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 837 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 866
Score = 48.9 bits (115), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 439 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 491
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 492 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 525
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 661 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 720
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 721 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 777
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 778 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 837
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 838 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 867
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 440 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 492
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 493 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 526
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 572 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 630
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 631 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 690
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 691 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 747
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 748 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 807
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 808 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 837
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 410 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 462
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 463 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 496
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 21/277 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 640 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL 698
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P++ P F
Sbjct: 699 GHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTLDQRTVPTSTFPWPIHDVPMMFWAN 758
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G REE + S N +E +++ L+K D + IG+++PY Q I + +
Sbjct: 759 YG-REEISANGTSYLNRIEAMNCERVITRLFK---DGVKPEQIGVITPYEGQRAYILQYM 814
Query: 545 GSK-------YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
Y+N V+V S+D FQG E+D II+S VR+N +IGFLS+ +R+NV
Sbjct: 815 QMNGTLDKDLYIN-----VEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRMNVG 869
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
LTRA++ L +LGN R+L+R +W L+ + C
Sbjct: 870 LTRAKYGLVVLGNPRSLSR-NILWNHLLIHFRQKGCL 905
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCT 84
+ LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ R LVC
Sbjct: 478 AQLNSSQTNAVRNVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKLHSERILVCA 530
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LA +VV+L +S E
Sbjct: 531 PSNVAVDHLATKLRDLGLKVVRLTAKSRE 559
>gi|167386218|ref|XP_001737669.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899439|gb|EDR26028.1| hypothetical protein EDI_014080 [Entamoeba dispar SAW760]
Length = 964
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 27/275 (9%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + AVL GD QL S + EA F +S+FER +
Sbjct: 643 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 697
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMY-GPYS 482
+ + +L QYRMHP+I F N FY +K+ + + R ++ R ++ P Y P
Sbjct: 698 ANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLENGVSNEDR-FDSRIINFFPDYTNPIM 756
Query: 483 FINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
FIN GRE++ S N EV ++ +I+ L K + E IGI+SPY AQ
Sbjct: 757 FINC-DGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNKVKENE---IGIISPYQAQ---- 808
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
++L S+Y+++ +KV +IDGFQG E++ II S VRSN IGF+S+ KR+NVALTR
Sbjct: 809 -QELISQYISTK---IKVANIDGFQGNEKEYIIFSCVRSNQTLGIGFVSDYKRLNVALTR 864
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
A+ L ++GN +TL K VW+ L+H R F
Sbjct: 865 AKCGLIVIGNIQTLIGSK-VWDMLIHHFYLRDALF 898
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--- 78
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K
Sbjct: 360 PNLSN-LNDYQIKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKHRFY 411
Query: 79 -------RTLVCTPTNVAIKELAARV-------VKLVKESVERDCRDAL 113
R LVC +N A+ + +++ +++V + +C D +
Sbjct: 412 NRNRAERRLLVCASSNNAVDVICSKLIEKGIPTIRIVADDQFENCSDKI 460
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 192/395 (48%), Gaps = 39/395 (9%)
Query: 311 LRKLQSSFNELNLPSAVEKDLLEDLLKS---FCLKRASLFLSTASSSYMLHSVAMEPLNF 367
L+KL NEL SA + LL+ LK+A + +T + +E +NF
Sbjct: 551 LKKLLRLRNELGELSAEDTKTYFTLLRKKEKSILKQADVVCATCVGA---GDRRLENVNF 607
Query: 368 --LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLS 425
++IDE+ Q E E IPL + G K +L GD QL ++ K + +A +SLFERL
Sbjct: 608 RTILIDESTQASEPECLIPL-VHGAKQVILVGDHQQLGPVILDKKAGDAGLKQSLFERLV 666
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFI 484
LG+ L +QYRM+P +S F ++ FY+ +++ T +R P+ P F
Sbjct: 667 VLGHVPIRLEVQYRMNPCLSEFSSNMFYDGSLQNGVTKEQRQLPNSAFPWPVVDTPMMFW 726
Query: 485 NVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
FG REE N +E +I+ L++ D + IG+++PY Q + +
Sbjct: 727 ANFG-REEISGSGTSFLNRIEAMNCERIITRLFR---DGVQPEQIGVITPYEGQRAYVVQ 782
Query: 543 --KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
++ V+V S+D FQG E+D II+S VR+N+ +IGFLS+ +R+NVALTR
Sbjct: 783 YMQMNGSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIGFLSDPRRLNVALTR 842
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD-- 658
A++ + ILGN R L+ K +W L+ + C V+ LD L
Sbjct: 843 AKYGVVILGNPRALS-KNQLWNQLLLHYREKGCL---------------VEGLLDSLQLS 886
Query: 659 --ELLNPESRLFRSQRWKVNFSENFLKSFRKLTSD 691
+L P +R F+ R + NF F T++
Sbjct: 887 SVQLNRPNNR-FKPNRGRQNFGGEAYHKFGAPTTN 920
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQA AV + L++ + LI GPPGTGKT T + ++ L + K R LVC P+
Sbjct: 449 LNVSQASAVKNVLQK-------PLSLIQGPPGTGKTVTSATIIHHLTNLNKDRILVCAPS 501
Query: 87 NVAIKELAARVVKL 100
NVA+ LA+++ +L
Sbjct: 502 NVAVDHLASKLDQL 515
>gi|66361936|ref|XP_627932.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
gi|46227554|gb|EAK88489.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
Length = 994
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 160/288 (55%), Gaps = 36/288 (12%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA+Q E + IPL+L G K +L GD QLPA V S+ + E + SLF+RL
Sbjct: 561 VIIDEASQGVELSTLIPLKL-GCKRLILVGDPKQLPATVLSRRAIERKYDISLFQRLQMS 619
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRK-RSYEKRFLHGPMYGPYSFINV 486
G +LS+QYRMHP IS FP+ +FY+ ++ D + K R+ + P++ P++F +V
Sbjct: 620 GQQVVMLSVQYRMHPQISAFPSKHFYDGELHDYKDILKTRAPVVTWQDIPIFKPFTFFSV 679
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---------------IGIVS 531
EE S N++E V +IL L + ++KL+ I ++S
Sbjct: 680 --NSEEEQGKSISNLLEADFVCQILELLGLILYEHQKKLTENTDLGEPSKRWYERIAVIS 737
Query: 532 PYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRS---------- 579
PY+ QV I++K+ K+ S + V ++DGFQG E+D II S VRS
Sbjct: 738 PYNEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRSQYIEEDSLNN 797
Query: 580 --NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK---KSVWE 622
N + GF+++ +R+NVALTRA++ LWI+GN+R L +S+W+
Sbjct: 798 ADNRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWD 845
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 164/314 (52%), Gaps = 47/314 (14%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + VL GD QL S + EA F +S+FER +
Sbjct: 569 IVDEAAQSLEPET-----LAGIINVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 623
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSF 483
+ + +L QYRMHP+IS F N FY +K+ + + + R ++ P Y P F
Sbjct: 624 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDRFDDRIINFFPDYTNPIMF 683
Query: 484 INVFGGREEFIEH------SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV 537
IN G EH S N EV ++ +++ L I+ E IGI+SPY AQ
Sbjct: 684 INCDG-----TEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENE---IGIISPYQAQ- 734
Query: 538 VAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
++L S+YV++ +KV +IDGFQG E++ II S VRSN +GF+++ KR+NVA
Sbjct: 735 ----QELISQYVSTK---IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVA 787
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD--------------DKDL 643
L RA+ L I+GN +TL K VW L+H R F + ++ L
Sbjct: 788 LKRAKSGLIIIGNIQTLITSK-VWNMLIHQFYLRDALFELKEHDFVQYNVENQEEFNRPL 846
Query: 644 GKAILAVKKELDEL 657
K+ V+ E+D+L
Sbjct: 847 EKSPFQVQYEVDDL 860
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 647 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 706
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 707 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 763
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 764 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 823
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 824 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 853
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 426 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 478
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 479 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 512
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K AVL GD QL ++ +K + +A +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S F ++ FYE +++ + R + P+ P F +
Sbjct: 647 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSN 706
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G E S N E + V KI+ +KA + IGI++PY Q V +
Sbjct: 707 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPS---GIGIITPYEGQRSYVVSSMQ 763
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L + ++V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA++
Sbjct: 764 LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 823
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L+ K +W L+ + C
Sbjct: 824 GLVILGNPKVLS-KHPLWNYLLRHFKEQNCL 853
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 426 LNSSQINAVKAVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPS 478
Query: 87 NVAIKEL----------AARVVKLVKESVERDCR 110
NVA+ +L RV +E VE R
Sbjct: 479 NVAVDQLCECIHRTGLKTVRVTAKSREDVESPVR 512
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 157/285 (55%), Gaps = 35/285 (12%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + VL GD QL S + EA F +S+FER +
Sbjct: 651 IVDEAAQSLEPET-----LAGIINVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 705
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMY-GPYS 482
+ + +L QYRMHP+IS F N FY +K+ + ++ R ++ R ++ P Y P
Sbjct: 706 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSIDDR-FDNRIINFFPDYTNPIM 764
Query: 483 FINVFGGREEFIEH------SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ 536
FIN G EH S N EV ++ +++ L I+ E IGI+SPY AQ
Sbjct: 765 FINCDG-----TEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENE---IGIISPYQAQ 816
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
++L S+YV++ +KV +IDGFQG E++ II S VRSN +GF+++ KR+NV
Sbjct: 817 -----QELISQYVSTK---IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNV 868
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
ALTRA+ L I+GN TL K VW L+H ++ F + K
Sbjct: 869 ALTRAKRGLIIIGNIPTLVTSK-VWNMLIHHFYLKKALFELKEHK 912
Score = 43.5 bits (101), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-- 79
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K+R
Sbjct: 360 PNLSN-LNDYQRKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKYRFY 411
Query: 80 --------TLVCTPTNVAIKELAARV-------VKLVKESVERDCRDAL 113
LVC +N A+ + +++ V++V + +C D +
Sbjct: 412 NINRGEKKLLVCASSNNAVDVICSKLIEKGVPTVRVVADEQFENCSDKI 460
>gi|380485224|emb|CCF39497.1| helicase SEN1 [Colletotrichum higginsianum]
Length = 696
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 168/320 (52%), Gaps = 17/320 (5%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSS--YMLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
E ++ ++ L A + +T S S M ++ +E ++IDEAAQ E + IPL
Sbjct: 149 EAEIRRRQIQQEILDGAQVLCATLSGSGHEMFKNLNVE-FETVIIDEAAQCVELSALIPL 207
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSI 444
+ G +L GD QLP V S+ + + +SLF R+ HLL QYRMHP I
Sbjct: 208 KY-GCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQNHPDHVHLLDRQYRMHPEI 266
Query: 445 SCFPNSYFYENKI---RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE-HSCRN 500
S FP++ FYE K+ D S +R++ + L GPY F +V G + + + S N
Sbjct: 267 SLFPSTEFYEGKLVDGEDMSALRRQPWHASAL----LGPYRFFDVEGTQSKGSKGRSLVN 322
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKL--SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
E+ V M+ L +KA + IGI++PY AQ+ ++ + ++ + ++
Sbjct: 323 HAELRVAMQ-LYERFKADFGRNYDIRGKIGIITPYKAQLQELKWQFSRQFGEAITDDIEF 381
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ D FQG E ++II S VR++ G IGF+ + +R+NV LTRA+ LWILG++R L + +
Sbjct: 382 NTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAKSSLWILGDSRALVQGE 441
Query: 619 SVWEALVHDANARQCFFNAD 638
W L+ +A R + D
Sbjct: 442 -FWNKLITNAKQRSLYTKGD 460
>gi|160331663|ref|XP_001712538.1| sen1 [Hemiselmis andersenii]
gi|159765987|gb|ABW98213.1| sen1 [Hemiselmis andersenii]
Length = 738
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 167/300 (55%), Gaps = 16/300 (5%)
Query: 341 LKRASLFLST-ASSSY-MLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
+K++ L +T A +SY L+ V + L+IDEAAQ E + +P++ + ++ +L GD
Sbjct: 403 IKKSKLIYTTLACASYTFLNKVKKKET--LIIDEAAQAIELSTLVPVRKT-CENLILIGD 459
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR 458
QLPA + S+ S + + RSLF+RL + + L Q+RMHP IS F + FY+N +
Sbjct: 460 IQQLPATIFSQSSLDLNYERSLFKRLQLKKFPIYFLETQFRMHPQISSFVSRKFYKNGLN 519
Query: 459 DSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF---IEHSCRNMVEVSVVMKILLNLY 515
DS V+K + F +GP F + G + F ++S N+ E+ ++ I +L
Sbjct: 520 DSQMVKK---VQNFHFLRCFGPILFFDASEGLDNFHKKQKNSWCNLEEIRIISFIFRSLI 576
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ + + SIGI+S Y QV IQE + + + ++ ++DGFQG E+++II S
Sbjct: 577 CLFTNLNLR-SIGIISSYQGQVSEIQE---NNILKRSELKGQINTVDGFQGREKNIIIFS 632
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
TVR+ N IGFLS+ +R+NVA TRA+ W +G A L +K + W + D R FF
Sbjct: 633 TVRARNERGIGFLSDCRRMNVAFTRAKFSFWGVGKASVL-KKDTNWFEGLFDFRKRGRFF 691
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 167/329 (50%), Gaps = 31/329 (9%)
Query: 311 LRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEP------ 364
LRKL+ +F L+ L +++ L++A + +T A +P
Sbjct: 647 LRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVG-------AGDPRLSQFR 699
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++IDE+ Q E E IPL + G K +L GD QL ++ K +A +SLFERL
Sbjct: 700 FPHILIDESTQASEPECLIPLMM-GAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFERL 758
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG+ L+IQYRMHPS++ FP++ YE ++ + R + +F P F
Sbjct: 759 ISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFF 818
Query: 485 NVFGGRE------EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
N G E FI N E S+ KI+ + + IGI++PY Q
Sbjct: 819 NCTGSEEISSSGTSFI-----NTTEASICEKIVTKFLELGSLPGQ---IGIITPYEGQRA 870
Query: 539 AIQEKL-GSKYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
I + S +N + +++V S+D FQG E+D II+S VRSN+ IGFL + +R+NV
Sbjct: 871 YITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNV 930
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALV 625
ALTRAR L ILGNA+ L+ K +W +L+
Sbjct: 931 ALTRARFGLIILGNAKVLS-KDPLWNSLI 958
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSML---LVILLQMKFRTLVCT 84
LN+SQ AV L A + LI GPPGTGKT S + LV ++ + LVCT
Sbjct: 537 LNESQISAVNKVL-------TAPLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCT 589
Query: 85 PTNVAIKELAARV 97
P+NVAI +L ++
Sbjct: 590 PSNVAIDQLTGKL 602
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E IP+ + G K +L GD QL ++ + + +A +SLFERL L
Sbjct: 569 VLIDESTQASXPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|301613470|ref|XP_002936221.1| PREDICTED: probable helicase senataxin [Xenopus (Silurana)
tropicalis]
Length = 2535
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 174/327 (53%), Gaps = 29/327 (8%)
Query: 360 VAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+ EP + +++DEA Q E E+ IPL L VL GD QLP V S + E +G+S
Sbjct: 2073 LGQEPFSCVIVDEAGQSCEVENLIPL-LHRCSKLVLVGDPEQLPPTVISMKAEELGYGQS 2131
Query: 420 LFERL-SYLGYSKHL-----LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFL 473
L R+ S+L + L++QYRMHP I FP+ YFY+ ++ + + E R
Sbjct: 2132 LMSRMCSFLDSTGTKSPVLHLTVQYRMHPDICLFPSHYFYKRMLK----TDRATEEVRCS 2187
Query: 474 HGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK----LSIGI 529
+ PY +V G E+ S N E+ V + ++ I S++K +IG+
Sbjct: 2188 SDWPFQPYMVFDVADGFEQKERESFCNPQEIKVAVALI-----KLIKSRKKEFCFRNIGV 2242
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFL 588
++PY AQ + I E+L + N +V ++DGFQG ++D II++ VR+N+ G IGFL
Sbjct: 2243 ITPYRAQKMRIIEELRRAFGNDIRPG-EVDTVDGFQGRQKDCIIVTCVRANSTQGGIGFL 2301
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD---KDLGK 645
++ +R+NV +TRA+ L+ILG+ RTL K W L+ DA R ++ +D+GK
Sbjct: 2302 ASRQRLNVTITRAKFSLFILGSLRTLMENKD-WNHLIQDAQRRGALIKTREEHYQRDVGK 2360
Query: 646 AILAVKKELDELDELLNPESRLFRSQR 672
IL +K + ++P SR Q+
Sbjct: 2361 -ILKLKPVVQRAP--IHPNSRPEEKQK 2384
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 51 IQLIWGPPGTGKTKT-VSMLLVILLQ---------------MKFRTLVCTPTNVAIKELA 94
I LI GPPGTGK+KT V +L IL++ + R LVC P+N A+ +L
Sbjct: 1864 ICLIHGPPGTGKSKTIVGLLYRILMENGSSTVPVQNLSAKNKRNRVLVCAPSNAALDDLM 1923
Query: 95 ARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRV 144
+++ KE ++ GDI L+ + S V + LD +V
Sbjct: 1924 KKIILEFKEKCHN--KNTPLGNCGDINLVRLGAEKTISSDVVKFSLDCQV 1971
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 582 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 640
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
L+ QYRMHP +S FP++ FY+ +++ T +R P+ P F +
Sbjct: 641 RLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSN 700
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K++ +KA + ++ IG+++PY Q +V+ +
Sbjct: 701 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQD---IGVITPYEGQRSYIVSTMQ 757
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRS++ IGFLS+ +R+NV LTRA+
Sbjct: 758 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVGLTRAK 816
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+C
Sbjct: 817 YGLVILGNPKVLS-KHELWHHLLVHFKDRKCL 847
Score = 47.8 bits (112), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ A+ + L + + LI GPPGTGKT T + ++ L + + LVC P+
Sbjct: 420 LNQSQISAIKAVL-------QTPLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPS 472
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 473 NVAVDQLCERIHRTGLKVVRLTAKSRE 499
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 604 VLIDEATQASEPECMIPLVL-GCKQAVLVGDHQQLGPIIMNKKAARAGLCQSLFERLVIL 662
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINV 486
G L +QYRMHP +S FP++ FYE +++ T ++R + P + P F
Sbjct: 663 GIRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWPVLETPMMFYAN 722
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE--K 543
G E S N E S KI+ K+ + + IG+V+PY Q I + +
Sbjct: 723 LGNEEISTSGTSYLNRTEASNCEKIVTRFMKSGVMPSQ---IGVVTPYEGQRSYIVQYMQ 779
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
++V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRA++
Sbjct: 780 FNGSLRKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAKY 839
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
+ ILGN + L+R +W L+ + C +
Sbjct: 840 GVVILGNPKILSR-HPLWHHLLVHYKEKGCLVDG 872
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 442 LNHSQVYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 494
Query: 87 NVAIKELAARV 97
NVA+ +LA ++
Sbjct: 495 NVAVDQLAEKI 505
>gi|402466738|gb|EJW02168.1| hypothetical protein EDEG_03389 [Edhazardia aedis USNM 41457]
Length = 1260
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 174/319 (54%), Gaps = 29/319 (9%)
Query: 337 KSFCLKRASLFLSTASSSYMLHSVAME-PLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+S + R+ + ST S+S M + + ++ ++IDEA Q E+ + IPL+ + K +L
Sbjct: 961 RSRIILRSDIICSTLSASAMENLIEDNLKIDMVIIDEACQCIETSALIPLKYNP-KKLIL 1019
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLP V +SN SLFERLS Y H+L QYRM I FPN FY N
Sbjct: 1020 VGDPQQLPPTV---ISNTRLLEISLFERLSRY-YPVHILKTQYRMTSDIVAFPNLQFYRN 1075
Query: 456 KIRDSSTVRKRSYEKRFLHGP---MYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILL 512
++ + + E+R GP + SFIN+ G ++ +S N+ E +++I+
Sbjct: 1076 QL-----ITPKFLEQR--KGPFALLLKSISFINIQGTEKQGDTNSFYNVKEEKAIVRIV- 1127
Query: 513 NLYKAWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
++ SK L+ IGI+SPY Q++ I E+ + V++ ++D FQG E+D
Sbjct: 1128 ----NYLASKIHLNKNIGIISPYKKQILHIIEEYRKICKANLTDLVEINTVDAFQGQEKD 1183
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
+II+STVRS +GF+ + +R+NVALTRAR + ILGNA L K+ W+AL+
Sbjct: 1184 IIILSTVRS---EKLGFVLDIRRLNVALTRARFNIIILGNANLLETDKT-WKALIQFYKD 1239
Query: 631 RQCFFNADD--DKDLGKAI 647
++ F+ D K LGK +
Sbjct: 1240 KKAFYEEDQFFHKILGKHL 1258
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 24/128 (18%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KF------- 78
LN QA+A+ SC K I LI GPPGTGKT T+ +L + KF
Sbjct: 748 LNWYQAEAISSCFST-----KTQITLIQGPPGTGKTTTILGILQTIFSKICKFGYNNGRS 802
Query: 79 -RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE 137
+ L+C P+N AI +A ++ K +K ++F P +I+ +G E +D +++
Sbjct: 803 PKVLICAPSNCAIDIIARKISKGLKL-----LDKSIFRP--NIVRIGVLE--SIDQRLKK 853
Query: 138 IYLDYRVK 145
I LDY K
Sbjct: 854 ITLDYLTK 861
>gi|303278610|ref|XP_003058598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459758|gb|EEH57053.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 826
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 161/334 (48%), Gaps = 15/334 (4%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQ 386
E+ L D + L A++ ST S S + + + +VIDEAAQ E + +PL
Sbjct: 317 ERALERDRAQIAILDEAAVVCSTLSFSGSGMFARMTRQFDVVVIDEAAQAVEPSTLVPL- 375
Query: 387 LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISC 446
G K L GD QLPA V S + E + +SLF+R GY H+L QYRMHP+I
Sbjct: 376 CYGAKQVFLVGDPRQLPATVLSSRATEYAYNQSLFKRFERCGYPIHVLKTQYRMHPAIRE 435
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCRNMVEVS 505
FP++ FY+N++ D R+ + R H ++ P+ F+++ G S N E
Sbjct: 436 FPSARFYQNELEDGP--RQAAKTSRPWHNVSLFRPFVFVDIAGKEYLGGGTSWSNDEEAH 493
Query: 506 VVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
+ I L + + IGI+SPY AQV I++ L V V SIDGFQ
Sbjct: 494 AAVAIATALMRNYPQLATGEKIGIISPYKAQVRNIRKILNDAIGEERSSRVDVNSIDGFQ 553
Query: 566 GGEEDLIIISTVRS---NNGGS------IGFLSNSKRVNVALTRARHCLWILGNARTL-T 615
G E+++ + S R+ + G +GF+S+ +R+NV LTRAR L +LG+ + L
Sbjct: 554 GREKEVCVFSVCRAPREDRGAKKKKTRRLGFVSDERRMNVGLTRARASLIVLGSGKALKA 613
Query: 616 RKKSVWEALVHDANARQCFFNADDDKDLGKAILA 649
W ALV+ A R G +A
Sbjct: 614 SGDENWCALVNSARERDLIVKPPSASGRGDCTVA 647
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 145/282 (51%), Gaps = 25/282 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K AVL GD QL ++ +K + A +SLFERL +
Sbjct: 599 VLIDEATQAAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVLI 657
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P F
Sbjct: 658 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPAPDTPMFFYQN 717
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E + V KI+ +K+ + + IG+++PY Q I
Sbjct: 718 LGQEEISSSGTSFLNRTEAANVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYI----- 769
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 770 ---VNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 826
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
VALTRA++ + ILGN + L+ K +W L+ + C +
Sbjct: 827 VALTRAKYGVVILGNPKVLS-KHPLWHYLLTHYKEKNCLVDG 867
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 437 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNHGQVLVCAPS 489
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L +VV+L +S E
Sbjct: 490 NVAVDQLTEKIHATGLKVVRLTAKSRE 516
>gi|221330969|ref|NP_001137907.1| CG7504, isoform B [Drosophila melanogaster]
gi|220902511|gb|ACL83262.1| CG7504, isoform B [Drosophila melanogaster]
Length = 1676
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 193/381 (50%), Gaps = 56/381 (14%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNL------PSAVEKDLLEDLLKSFCLKRASLFLS 349
I+ L K ++L++LQ +L L P +++ E + C+ RA++ +
Sbjct: 1313 IQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFE--ISHMCVTRANIICT 1370
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
T SS L + ++ + ++DEA Q E + +P++ G+ H VL GD QLPA+V SK
Sbjct: 1371 TLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSK 1428
Query: 410 VSNEACFGRSLFERLS-------------YLGYSKHL-LSIQYRMHPSISCFPNSYFYEN 455
+ + S+F+R+ +L ++K LS QYRMHP I +PN YFYE+
Sbjct: 1429 KAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYED 1488
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINV------FGGREEFIEHSCRNMVEVSVVMK 509
++ ++ RF P+ PY IN+ G + + I N E V K
Sbjct: 1489 QLINAECT------ARFA-SPLI-PYCVINLKYTCDSNGAQNKSIS----NNEEARFVAK 1536
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
+L + K ++ S G++SPY Q A+ + + S ++N + ++D +QG E+
Sbjct: 1537 LLTEMDKHM--PSKRFSYGLISPYQNQCYALSQVIPS-HMN-----ITPQTVDSYQGLEK 1588
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
D+IIIS R+ GFL+N +R+NVALTR R CL I GN L + +W L+ DA
Sbjct: 1589 DVIIISNARTR---GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KSVEMWRNLLDDAR 1644
Query: 630 ARQCFFNADDD--KDLGKAIL 648
R+ +FN D D DL ++++
Sbjct: 1645 KRKVYFNLDRDDVNDLDRSLI 1665
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LN+ Q VL +++ D + ++ LI GPPGTGK++ +S L + L + + L
Sbjct: 1172 LNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKIL 1231
Query: 82 VCTPTNVAIKELAA 95
+C +N A+ +
Sbjct: 1232 ICAHSNTAVDHIVG 1245
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 144/279 (51%), Gaps = 25/279 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 603 VLIDEATQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 661
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 662 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 721
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E S V KI+ +K+ + + IG+V+PY Q I
Sbjct: 722 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQ---IGVVTPYEGQRSYI----- 773
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 774 ---VNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 830
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
VALTRA++ + ILGN + L+ K +W L+ + C
Sbjct: 831 VALTRAKYGVVILGNPKVLS-KHPLWHYLLTHYKEKNCL 868
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ I LI GPPGTGKT T + + L +M + LVC P+
Sbjct: 441 LNHSQMYAVKSVLQK-------PISLIQGPPGTGKTVTSASTVYHLAKMNPGQVLVCAPS 493
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L +VV+L +S E
Sbjct: 494 NVAVDQLTEKIHATGLKVVRLTAKSRE 520
>gi|24660647|ref|NP_648177.1| CG7504, isoform C [Drosophila melanogaster]
gi|7295157|gb|AAF50482.1| CG7504, isoform C [Drosophila melanogaster]
Length = 1417
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 56/381 (14%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNL------PSAVEKDLLEDLLKSFCLKRASLFLS 349
I+ L K ++L++LQ +L L P +++ E + C+ RA++ +
Sbjct: 1054 IQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFE--ISHMCVTRANIICT 1111
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
T SS L + ++ + ++DEA Q E + +P++ G+ H VL GD QLPA+V SK
Sbjct: 1112 TLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSK 1169
Query: 410 VSNEACFGRSLFERLS-------------YLGYSKHL-LSIQYRMHPSISCFPNSYFYEN 455
+ + S+F+R+ +L ++K LS QYRMHP I +PN YFYE+
Sbjct: 1170 KAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYED 1229
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINV------FGGREEFIEHSCRNMVEVSVVMK 509
++ ++ RF P+ PY IN+ G + + I N E V K
Sbjct: 1230 QLINAECT------ARFA-SPLI-PYCVINLKYTCDSNGAQNKSIS----NNEEARFVAK 1277
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEE 569
+L + K ++ S G++SPY Q A+ + + S + ++D +QG E+
Sbjct: 1278 LLTEMDKHM--PSKRFSYGLISPYQNQCYALSQVIPSH------MNITPQTVDSYQGLEK 1329
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
D+IIIS R+ GFL+N +R+NVALTR R CL I GN L + +W L+ DA
Sbjct: 1330 DVIIISNARTR---GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KSVEMWRNLLDDAR 1385
Query: 630 ARQCFFNADDD--KDLGKAIL 648
R+ +FN D D DL ++++
Sbjct: 1386 KRKVYFNLDRDDVNDLDRSLI 1406
Score = 42.0 bits (97), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LN+ Q VL +++ D + ++ LI GPPGTGK++ +S L + L + + L
Sbjct: 913 LNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKIL 972
Query: 82 VCTPTNVAIKELAA 95
+C +N A+ +
Sbjct: 973 ICAHSNTAVDHIVG 986
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 140/254 (55%), Gaps = 7/254 (2%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N +++DEA Q E E +PL + K VL GD CQL ++ K + A G+SLFERL
Sbjct: 263 FNQVLVDEATQSTEPECLVPLVTA--KQIVLVGDHCQLGPIIVCKKAASAGLGKSLFERL 320
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE-KRFLHGPMYGPYSF 483
LG + L +QYRMHP +S FP+ FY+ +++ T+++R Y K F P F
Sbjct: 321 VMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 380
Query: 484 INVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS-IGIVSPYSAQVVAIQE 542
N G E + + M+IL+ +A ++S K + IG+++PY Q I
Sbjct: 381 YNSNGLEEMSASGTSYLNRSEAQNMEILV---RALLNSGLKATQIGVITPYEGQRAYITS 437
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++V S+D FQG E+D I++S VRSN IGFL++ +R+NVALTRA+
Sbjct: 438 LFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 497
Query: 603 HCLWILGNARTLTR 616
+ L I GNA+ L+R
Sbjct: 498 YGLIICGNAKVLSR 511
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-- 78
P+L+ LN SQ A+ L + + LI GPPGTGKT T + L+ + + K
Sbjct: 95 APNLAP-LNHSQIDAIQKSLN-------SPLSLIQGPPGTGKTLTCATLVYHMHKTKMGG 146
Query: 79 RTLVCTPTNVAIKELAAR-------VVKLVKESVERDCRDALFFPLGDILLLGNNER-LK 130
+ LV P+NVA+ +L+ R VV+L S E + D L L N + LK
Sbjct: 147 KVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRES------VSSIADYLYLHNQVKLLK 200
Query: 131 VDSGVE 136
D G E
Sbjct: 201 TDVGEE 206
>gi|388491656|gb|AFK33894.1| unknown [Lotus japonicus]
Length = 164
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Query: 521 SKEKLSIGIVSPYSAQVVAIQEKLGSKY-VNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
+++K+SIGI+SPY++QV IQ+K+ V+ F+V V S+DGF+GGE+D+IIISTVRS
Sbjct: 3 TRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFKGGEQDVIIISTVRS 62
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
N G +GFLSN +R NVA+TRAR+ LWILGNA TL +VW+ +V DA R CF AD
Sbjct: 63 NPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
Query: 640 DKDLGKAILAVKKELDELDE 659
D L + I V EL L+E
Sbjct: 123 DNKLARVIEDVVFELQLLEE 142
>gi|330841718|ref|XP_003292839.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
gi|325076881|gb|EGC30633.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
Length = 938
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 160/303 (52%), Gaps = 15/303 (4%)
Query: 336 LKSFCLKRASLFLSTAS-SSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
+++ L A + +T S S L + + + ++IDEAAQ E+ + IP+Q K V
Sbjct: 526 IRTMILDEADIVATTLSFSGSSLLTKMIGGFDIVIIDEAAQAVETSTLIPIQ-HQCKKVV 584
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
L GD QLPA + S ++ + + +SLF+RL H+L QYRMH I FP+ +FY+
Sbjct: 585 LVGDPKQLPATIISPLAIQHSYDQSLFQRLQEKN-KPHMLDTQYRMHSIIRKFPSKHFYD 643
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLN 513
+ ++D + R+ + P GP F ++ E + S NM E+ + + +
Sbjct: 644 DLLQDGPNIPSRA--AHYHSNPFLGPLVFYDLSWSVETKPGGGSVCNMEEIKMAYFLYQH 701
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
+ K + + IGI+SPY QV+ ++E + N G V + ++DGFQG E ++II
Sbjct: 702 IIKEYPEEDFSGRIGIISPYRQQVLQLREA----FKNYPG--VSIDTVDGFQGREREIII 755
Query: 574 ISTVRS--NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
S VR+ G IGFLS+ +R+NVALTR R L I+GN + L+ K W L+ A
Sbjct: 756 FSCVRAPAEKGSGIGFLSDVRRMNVALTRPRCSLIIMGNVKALSVNKD-WNDLIVHAQDL 814
Query: 632 QCF 634
C
Sbjct: 815 GCL 817
>gi|145539554|ref|XP_001455467.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423275|emb|CAK88070.1| unnamed protein product [Paramecium tetraurelia]
Length = 762
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 160/291 (54%), Gaps = 30/291 (10%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIK 391
D +K L +A + T SSS + +A+ L F ++IDEAAQ E + IPLQ G +
Sbjct: 420 DKVKKEILNQAKVIFGTLSSSGS-NVLALSELKFDTVIIDEAAQAVEISTLIPLQY-GCR 477
Query: 392 HAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSY 451
+L GD QLPA + S + + + +SLFERL G + HLL QYRMH IS F ++
Sbjct: 478 RLILIGDPNQLPATIFSSICGKYKYDQSLFERLQKQGANVHLLKTQYRMHAKISKFISTT 537
Query: 452 FYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKIL 511
FY +++ D + + +F Y P ++V G E F +S N +E VV +
Sbjct: 538 FYGSELNDYEYLERLIGTPKFYDYYTYSPVVVLHV-KGYENFTRNSYCNEMEAKVVTE-- 594
Query: 512 LNLYKAWIDSKEKL------SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQ 565
LYK D K K ++GIVSPYS QV I ++L K +N V+V ++DGFQ
Sbjct: 595 --LYK---DMKNKFPTFNMNNLGIVSPYSQQVWLISKQL--KKMNEEN--VEVKTVDGFQ 645
Query: 566 GGEEDLIIISTVRS--------NNGGSIGFLSNSKRVNVALTRARHCLWIL 608
G E+D+II S+VRS N +GFLS+++R+NV+L+R R L ++
Sbjct: 646 GREKDVIIFSSVRSKFISENQKNPKKGVGFLSDARRMNVSLSRCRQTLIVV 696
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 24 LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
L S N SQ +A+ L+ I LI GPPGTGKTKTV L +LLQ K
Sbjct: 225 LHSIYNSSQYEAIQQTLK------THGITLIQGPPGTGKTKTVLGTLSVLLQSK 272
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 163/326 (50%), Gaps = 12/326 (3%)
Query: 308 HFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLSTASSSYMLHSVAMEP 364
H +KLQ NEL SA ++ + K L+ A + +TA + +A
Sbjct: 457 HKAFQKLQQLKNELGELSAGDEKKYRNAQKKLEREILENADVICTTAVGAGDPR-LANFR 515
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++IDE+ Q E E IP+ + G K V+ GD QL +V K + A +SLFERL
Sbjct: 516 FRMVLIDESTQATEPECLIPIVM-GAKQVVMVGDHKQLGPVVTCKQAYAAGLAQSLFERL 574
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG L IQYRMHP +S FP++ FY+ +++ + +R+ P+
Sbjct: 575 IALGIQPIRLQIQYRMHPCLSEFPSNTFYDGTLQNGVSAIERTLSHIDFPWPVPSKPMMF 634
Query: 485 NVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
G+EE S N E S V K + +L A + ++ IG+V+PY Q + +
Sbjct: 635 WSQTGQEEMSASGTSFLNRAEASAVEKCVTHLLNAGVSPEQ---IGVVTPYEGQRAYVVQ 691
Query: 543 KLGSKYVNSAGFA--VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
+ V ++V S+D FQG E+D II++ VRSN IGFLS+ +R+NVA+TR
Sbjct: 692 HMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSDPRRLNVAITR 751
Query: 601 ARHCLWILGNARTLTRKKSVWEALVH 626
AR L ++GN + L ++ E L H
Sbjct: 752 ARSGLIVIGNPKVLNKQHLFHEMLTH 777
Score = 47.8 bits (112), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ AV + L++ + L+ GPPGTGKT T + L+ L + + +VC P+
Sbjct: 355 LNQSQHDAVKTVLQR-------PLSLVQGPPGTGKTVTSATLVYHLAKRGNGQVIVCAPS 407
Query: 87 NVAIKELAARVVK 99
NVA+ LA ++ K
Sbjct: 408 NVAVDHLAEKIEK 420
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 150/265 (56%), Gaps = 12/265 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFERL L
Sbjct: 602 VLIDESTQATEPEILVSI-VRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLL 660
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FY+ +++ T +R + P +F
Sbjct: 661 GIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENERQMKGIDWSWPTPSKPAFFWHC 720
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G EE N E + V K++ L K ++ ++ IG+++PY Q +V +
Sbjct: 721 SGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVEPRQ---IGVITPYEGQRSFIVNYMQ 777
Query: 543 KLGSKYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
G+ +NS + V++ S+D FQG E+D II++ VRSN+ IGFLS+ +R+NVA+TRA
Sbjct: 778 TQGT--LNSKLYEGVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRA 835
Query: 602 RHCLWILGNARTLTRKKSVWEALVH 626
++ + ++GNA+ L+R + +E + H
Sbjct: 836 KYGIVVVGNAKVLSRHELWYELINH 860
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCTPT 86
LN SQ+QAV L + + LI GPPGTGKT + ++ L+Q + LVC+P+
Sbjct: 441 LNSSQSQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 493
Query: 87 NVAIKELAARVVK 99
N+A+ LA ++ K
Sbjct: 494 NIAVDHLAEKIHK 506
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 149/265 (56%), Gaps = 9/265 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
++IDE+ Q E E +P+ + G K VL GD CQL ++ K + A +SLFERL
Sbjct: 615 MVLIDESTQATEPECMVPIVM-GSKQVVLVGDHCQLGPVIMCKKAANARLSQSLFERLVL 673
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
L L +QYRMHP+++ FP+S FY+ ++++ + +R ++ P F
Sbjct: 674 LNIKPIRLEVQYRMHPALTEFPSSVFYDGTLQNAVSPEERRMDEVNFPWPNVDKPMFFWC 733
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G+EE S N E V K++ L K + + + IG+++PY Q + +++
Sbjct: 734 SFGQEEISSSGTSYLNRTEAVNVEKVVTKLMKNGV---KPVQIGVITPYEGQRAYVVQQM 790
Query: 545 GSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
S+ ++V S+D FQG E+D II+S VRSN IGFL++++R+NVALTRA+
Sbjct: 791 QFNGGMSSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDARRLNVALTRAK 850
Query: 603 HCLWILGNARTLTRKKSVWEALVHD 627
+ + I+GNA+ L+R + +W L+ +
Sbjct: 851 YGVIIIGNAKVLSRNE-LWHHLIKE 874
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 452 LNPSQIYAVKTVLQK-------PLGLIQGPPGTGKTVTSATIVYHLSKMGMGQVLVCAPS 504
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 505 NIAVDQLTEKIHK 517
>gi|183233537|ref|XP_654409.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169801534|gb|EAL49041.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 979
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 164/320 (51%), Gaps = 47/320 (14%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + VL GD QL S + EA F +S+FER +
Sbjct: 650 IVDEAAQSLEPET-----LAGIINVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 704
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSF 483
+ + +L QYRMHP+IS F N FY +K+ + + R ++ P Y P F
Sbjct: 705 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSDDRFDDRIINFFPDYTNPIMF 764
Query: 484 INVFGGREEFIEH------SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV 537
IN G EH S N EV ++ +++ L I+ E IGI+SPY AQ
Sbjct: 765 INCDG-----TEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENE---IGIISPYQAQ- 815
Query: 538 VAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
++L S+YV++ +KV +IDGFQG E++ II S VRSN +GF+++ KR+NVA
Sbjct: 816 ----QELISQYVSTK---IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVA 868
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD--------------DKDL 643
LTRA+ L I+GN TL K VW L+H R F + ++ L
Sbjct: 869 LTRAKSGLIIIGNIPTLITSK-VWNMLIHQFYLRDALFELKEHDFVQYNVENQEEFNRPL 927
Query: 644 GKAILAVKKELDELDELLNP 663
K+ V+ E+D+ D P
Sbjct: 928 EKSPFQVQYEVDDSDLCCKP 947
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-- 79
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K R
Sbjct: 359 PNLSN-LNDYQTKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKRRFY 410
Query: 80 --------TLVCTPTNVAIKELAARV-------VKLVKESVERDCRDAL 113
LVC +N A+ + +++ V++V + +C D +
Sbjct: 411 KINRGEKKLLVCASSNNAVDVICSKLIEKGIPTVRVVADEQFENCSDKI 459
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 161/298 (54%), Gaps = 19/298 (6%)
Query: 331 LLEDLLKSFCLKRASLFLSTASSSYMLHSVAME-PLNFLVIDEAAQLKESESTIPLQLSG 389
LE L+ + + ST + + H +++ P+ F IDEAAQ E+ + +PL + G
Sbjct: 601 FLESLIWADICSNVDVIFSTCLGASVSHVASIDFPIVF--IDEAAQCNEASTLVPL-MKG 657
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSI----QYRMHPSIS 445
+ VL GD QLP++ S + + F SLFERL SK + S+ QYRMHP IS
Sbjct: 658 SQQLVLIGDHKQLPSIAMSPDATQEGFNISLFERLMV---SKRVPSVMLDTQYRMHPDIS 714
Query: 446 CFPNSYFYENKIRDSSTV---RKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMV 502
FPN FY ++RD+ + ++ + RF +FIN G E+ S N
Sbjct: 715 KFPNMAFYRGQLRDAPSTLKSKQAAIRSRFSPAGKSSALTFINC-DGLEQKEGKSYINEG 773
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV---KVM 559
E + I+ +L D + IGI++PY+ QV ++ + + AG V +V
Sbjct: 774 EAEEITLIVRDLLARNSDLRCS-DIGIITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVS 832
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
S+DGFQG E+++I+ S VRSN +GFLS+ +R+NVALTRA+ L+++GNA TL K
Sbjct: 833 SVDGFQGREKEVIVFSAVRSNKHSQLGFLSDRRRLNVALTRAKAALFVVGNALTLQGK 890
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVS---MLLVILLQMKFRTLVCT 84
LN +Q +A+ L RC LI GPPGTGK+ T+ LL + Q+ LVC
Sbjct: 460 LNRTQIRAIAQSL-SSRC------ALIQGPPGTGKSITIIEALRLLKVHFQVPQPILVCA 512
Query: 85 PTNVAIKELAARVVK 99
PT+VA+ +L AR VK
Sbjct: 513 PTHVAVDQLLARAVK 527
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 149/267 (55%), Gaps = 15/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--S 425
++IDEA Q E E IP+ + G KH V+ GD QL +V +K + +A SLF+RL S
Sbjct: 266 VLIDEATQATEPECLIPI-VQGAKHVVMVGDHRQLGPVVMNKKAAKAGLNNSLFDRLVKS 324
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
+ L +QYRMHP +S FP++ FYE +++ +R P +F
Sbjct: 325 DTKHRPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGVAASERQLSSVDFPWPNPNKPTFFY 384
Query: 486 VFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAI 540
+ G EE S N E S V KI+ KA + + IG+++PY Q VV+
Sbjct: 385 ICLGAEEISSSGTSYLNRTEASNVEKIVTTFLKAGVLPSQ---IGVITPYEGQRAYVVSY 441
Query: 541 QEKLGSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALT 599
++ G + S + V+V S+D FQG E+DLII+S VRSN IGFLS+ +R+NVALT
Sbjct: 442 MQRNGP--LRSQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDERRLNVALT 499
Query: 600 RARHCLWILGNARTLTRKKSVWEALVH 626
RA++ + +LGN R L K+++W L++
Sbjct: 500 RAKYGVILLGNPRVLA-KQTLWNKLLN 525
Score = 43.9 bits (102), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCTPT 86
LN Q +AV L Q + LI GPPGTGKT T S++ + Q + LV P+
Sbjct: 102 LNTFQMEAVKGVLEQ-------PLSLIQGPPGTGKTVTSASIVFHMSKQNMGQVLVTAPS 154
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
N+A+ L RVV+L +S E
Sbjct: 155 NIAVDHLTMKISATGLRVVRLAAKSRE 181
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 145/280 (51%), Gaps = 15/280 (5%)
Query: 351 ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKV 410
S +L SV E + +IDE Q E S +PL G K VL GD QLPA V
Sbjct: 212 GSGHQLLDSVDFESV---IIDECTQATEPASLVPLA-RGAKRCVLLGDHKQLPATVHCNT 267
Query: 411 SNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK 470
+ G SLFERL+ G HLL IQ RMHPSI+ F N +FY+N+I+ + R
Sbjct: 268 AKSGGLGISLFERLAMSGTPVHLLDIQRRMHPSIAEFSNHHFYDNRIKHEVSDRPLIPGL 327
Query: 471 RFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLN-LYKAWIDSKEKLSIGI 529
R+ + + + E + S N E ++LL+ LY A + IG+
Sbjct: 328 RWPNPQIRVALVDTSQLIAGESKVGTSLMNREEA----RLLLDALYDAVANGTPPGQIGL 383
Query: 530 VSPYSAQ----VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI 585
V PY+AQ + A++E +++ AV++ ++DGFQG E++LI S VRSN G +
Sbjct: 384 VVPYNAQKSHVIAALKED--TRFSPEQRAAVQINTVDGFQGHEKELIFFSAVRSNVSGQV 441
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
GF+++ +R+NV LTRAR L + + T+T W + V
Sbjct: 442 GFIADPRRMNVMLTRARRGLVVFCDVNTMTASGGHWRSWV 481
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 170/331 (51%), Gaps = 34/331 (10%)
Query: 311 LRKLQSSFNELN---------LPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVA 361
L KL+S NEL+ L +A EK+LL RA+ + ++
Sbjct: 505 LLKLRSENNELSIQDEKKLRILVAAAEKELL----------RAAHVICCTCVGAGDRRIS 554
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
++IDEA Q E E IPL L G K VL GD QL +V +K A +SLF
Sbjct: 555 KYKFRSVLIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVALASLSQSLF 613
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
ERL LG S L +QYRMHP +S FP++ FYE +++ T +R R + P P
Sbjct: 614 ERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERI--ARHVDFPWIQPD 671
Query: 482 SFINVFG--GREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ- 536
S + + G+EE S N E S KI+ ++ + ++ IGIV+PY Q
Sbjct: 672 SPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQR 728
Query: 537 --VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+V + GS + AV+V S+D FQG E+D II+S VRS+ IGF+++ +R+
Sbjct: 729 SYIVQYMQNNGSMQKDLYK-AVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRL 787
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALV 625
NVALTRA++ + +LGN + L K ++W V
Sbjct: 788 NVALTRAKYGVIVLGNPKVLA-KHALWYHFV 817
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 21/93 (22%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR-------T 80
LN SQ++AV + L + + LI GPPGTGKT T + ++ L M+ R
Sbjct: 393 LNASQSEAVRAVLSK-------PLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPV 445
Query: 81 LVCTPTNVAIKELAA-------RVVKLVKESVE 106
LVC P+NVA+ +LA RVV++ +S E
Sbjct: 446 LVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSRE 478
>gi|330796515|ref|XP_003286312.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
gi|325083739|gb|EGC37184.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
Length = 2271
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 184/354 (51%), Gaps = 20/354 (5%)
Query: 333 EDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPL-QLSGIK 391
E +++ LK ++ LST S+S M + ++ID+A Q E + IPL S +K
Sbjct: 1477 ESKIRANTLKNTNICLSTLSASAMDFRRNHFIPSIIIIDDATQSCEISTIIPLASSSNVK 1536
Query: 392 HAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSY 451
+L GD Q + SK S + SLFERLS +L QYRMHPSIS F + +
Sbjct: 1537 KLILVGDPVQSLPKILSKDSVDNGINISLFERLSK-AIDVQILDTQYRMHPSISHFSSKH 1595
Query: 452 FYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKIL 511
FY K++DS + + + F Y P F ++ +EE S +N E+ V +I+
Sbjct: 1596 FYSGKLKDSPNLIQNN--TLFNQDQKYTPLEFYDIIDSQEEKCFGSIKNESEIETVFRII 1653
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
L + KE L+IGI++PY Q + L KY N +++ +IDGF G E+D+
Sbjct: 1654 KKLVQDNPKLKE-LTIGIITPYKLQRNEL--ILSKKYFNQP-IDIEINTIDGFHGVEKDI 1709
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN-- 629
II S VRS +GFL++ ++N+A+TRA++ L+I+GN + L K ++W L+ +
Sbjct: 1710 IIFSCVRSE---RLGFLNDKSQINIAITRAKYGLFIIGN-KNLLEKDTIWSQLIKYISEI 1765
Query: 630 ARQCFFNADDDKDLGKAILAVKKELDEL--DELLNPESRLFRSQRWKVNFSENF 681
+ +N D K+ KA KE + L + L E F+++ N +E+F
Sbjct: 1766 GKIQTYNIKDIKNFSKAT----KEFNILHQESLATGEFSHFKTREGTRNQNEDF 1815
Score = 44.3 bits (103), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVC 83
+ LND Q AV L I L+ G GTGKT V L+ ILL + F+ LVC
Sbjct: 1371 NALNDQQRNAVDQSL------FSEGITLVHGLTGTGKTHLVLNLISILLAVNPNFKILVC 1424
Query: 84 TPTNVAIKELAARVVK 99
P++ ++ E++ R++K
Sbjct: 1425 APSHGSVDEISRRLMK 1440
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP+ + G K +L GD QL ++ + + A +SLFE+L L
Sbjct: 579 VLIDESTQASEPECLIPV-VKGTKQVILVGDHQQLGPVILDRKAGNAGLKQSLFEKLVSL 637
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ TV +R+ + P+ P F
Sbjct: 638 GHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTILESSFPWPISDIPMMFWAN 697
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L+K D + IG+++PY Q I +
Sbjct: 698 YG-REEISANGTSYLNRIEAINCERIITRLFK---DGVKPAQIGVITPYEGQRAYIVQYM 753
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N+ SIGFL + +R+NVALTRA+
Sbjct: 754 QMNGSMDKDMYMTVEVGSVDAFQGREKDYIILSCVRANDHQSIGFLVDPRRLNVALTRAK 813
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
+ L ILGN +L R + +W L+ + C D
Sbjct: 814 YGLAILGNPTSLFRNR-LWNHLLIHFREKGCLVEGTMD 850
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ A+ L++ + LI GPPGTGKT T + ++ L +M K R LVC
Sbjct: 417 TKLNASQKNAIKHVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKMHKERLLVCA 469
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+N A+ LAA +VV+L +S E
Sbjct: 470 PSNTAVDHLAAKLRDLGLKVVRLTAKSRE 498
>gi|328867998|gb|EGG16379.1| DNA2/NAM7 helicase family protein [Dictyostelium fasciculatum]
Length = 917
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 163/305 (53%), Gaps = 20/305 (6%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
++S L A + +T S S M + ++IDEAAQ E+ + +P+Q K +L
Sbjct: 537 IRSIILDDAEIIATTLSFSGSSLLTKMNGFDIVIIDEAAQAVETSTLVPIQ-HKCKKIIL 595
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA + S ++ + + +SLF+RL +L+ QYRMH +I FP+ +FY +
Sbjct: 596 VGDPKQLPATIISPIAIKYKYDQSLFQRLQE-KCPPLMLTTQYRMHSTIRQFPSRHFYND 654
Query: 456 KIRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEH---SCRNMVEVSVVMKIL 511
+ D + R+ HG +GP F ++ RE I+H S N E + + +
Sbjct: 655 LLEDGPNIADRATN---YHGNSFFGPLVFYDLPFARE--IKHGGGSVFNEDECFMAIYLY 709
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+ + + + IGI+SPY QV+ ++E + N G ++ ++DGFQG E ++
Sbjct: 710 QLILRTYPEQDFTGRIGIISPYRQQVLTLREF----FKNCPGISID--TVDGFQGREREI 763
Query: 572 IIISTVRSNN--GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDAN 629
II S VR+++ G IGFL++ +R+NVALTR R L ++GNA+TL+ K W L+
Sbjct: 764 IIFSCVRASDQEGAGIGFLADVRRMNVALTRPRSSLLVIGNAKTLSINKD-WNELIKHCQ 822
Query: 630 ARQCF 634
+ C
Sbjct: 823 SNNCL 827
>gi|194750317|ref|XP_001957574.1| GF10480 [Drosophila ananassae]
gi|190624856|gb|EDV40380.1| GF10480 [Drosophila ananassae]
Length = 1728
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 163/315 (51%), Gaps = 39/315 (12%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
CL RA++ +T SS L + ++ + +IDEA Q E + +P++ G++H VL GD
Sbjct: 1413 CLSRANIVCTTLSSCVKLANY-IDFFDICIIDEATQCTEPWTLLPMRF-GLRHLVLVGDT 1470
Query: 400 CQLPAMVESKVSNEACFGRSLFER--------LSYLGYSKHL------LSIQYRMHPSIS 445
QLPA+V S+ + E S+F+R L G ++ + LS+QYRMHP I
Sbjct: 1471 QQLPAVVLSQKAIEYGLSNSMFDRIQRSLQKQLESPGSNQFIHTKLFKLSVQYRMHPEIC 1530
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVE 503
+PN YFYE+++ + K + PYS IN+ R+ S N E
Sbjct: 1531 RWPNKYFYEDQLVSAPCTEKSA---------ALIPYSVINLSYTRDSSTMSNRSISNDEE 1581
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDG 563
V K++ + K + ++ S G++SPYS Q A+ + V + V ++ID
Sbjct: 1582 ARFVAKLITAMQK--LMPTKRYSYGLISPYSNQCYALSQ------VMTEDMKVTPLTIDA 1633
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
+QG E+D+IIIS R+ GFLSN +R+NVALTR + CL I GN L + +W
Sbjct: 1634 YQGLEKDVIIISYARTR---GCGFLSNYQRLNVALTRPKRCLVICGNFDDL-QSVDMWRQ 1689
Query: 624 LVHDANARQCFFNAD 638
L+ DA R +F+ +
Sbjct: 1690 LLDDARQRNVYFDVE 1704
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S F ++ FYE +++ T +R + P+ F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQN 733
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G EE N E S V K++ +K+ + + IG+++PY Q +A +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ ILGN + L+ K +W L+ + CF
Sbjct: 851 GVVILGNPKVLS-KHPLWLYLLSHYKEKGCF 880
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 453 LNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 505
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ L +VV+L +S E
Sbjct: 506 NVAVDHLCEKIHQTGLKVVRLAAKSRE 532
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S F ++ FYE +++ T +R + P+ F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQN 733
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G EE N E S V K++ +K+ + + IG+++PY Q +A +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRMNVALTRAKY 850
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ ILGN + L+ K +W L+ + CF
Sbjct: 851 GVVILGNPKVLS-KHPLWLYLLSHYKEKGCF 880
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 453 LNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 505
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ L +VV+L +S E
Sbjct: 506 NVAVDHLCEKIHQTGLKVVRLAAKSRE 532
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 145/254 (57%), Gaps = 10/254 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 612 VLIDESTQSAEPECMIPLVL-GCKQLVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVIL 670
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ TV++R P+ P F +
Sbjct: 671 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLRRNVDFPWPVVDSPMMFWSN 730
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + KI+ +KA + + IGI++PY Q +V+ +
Sbjct: 731 LGNEEISASGTSYLNRTEAAACEKIISKFFKAGVSPSQ---IGIITPYEGQRSYIVSSMQ 787
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + ++V S+D FQG E+D I++S VRSN+ IGFL++ +R+NVALTRA+
Sbjct: 788 TNGS-HKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTRAK 846
Query: 603 HCLWILGNARTLTR 616
+ + ILGN + L++
Sbjct: 847 YGVVILGNPKVLSK 860
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 450 LNISQVCAVKSVLQK-------PLSLIQGPPGTGKTVTSATIVYHLAKLSGSQVLVCAPS 502
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L + +VV+L +S E
Sbjct: 503 NVAVDQLTEKIHRTSLKVVRLTAKSRE 529
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 618 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 676
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINV 486
++ L +QYRMHP +S FP++ FY+ +++ T +R + P+ P F +
Sbjct: 677 QFTPIRLKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSN 736
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E + V KI+ +KA + + IG+++PY Q +V +
Sbjct: 737 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPAD---IGVITPYEGQRSYIVNTMQ 793
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E++ I++S VRSN IGFLS+ +R+NVALTRA+
Sbjct: 794 NTGT-FKKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 852
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GN + L K +W L+ ++C
Sbjct: 853 YGLVIIGNPKVLC-KHELWHHLLVHFKDKKCL 883
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LN SQ A+ L + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 456 LNASQIAAIKQVLSN-------PLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPS 508
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 509 NVAVDQLCERIHRTGLKVVRLTAKSRE 535
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E IP+ + G K +L GD QL ++ + + +A +SLFE+L L
Sbjct: 569 VLIDESTQASGPECLIPI-VKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFEKLISL 627
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G+ L +QYRM+P +S FP++ FYE +++ T+ +R+ P+ G P F
Sbjct: 628 GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWAN 687
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G REE + S N +E +I+ L++ D + IG+++PY Q I +
Sbjct: 688 YG-REEISANGTSFLNRIEAMNCERIITKLFR---DGVKPEQIGVITPYEGQRAYILQYM 743
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N +IGFL + +R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L R ++W L+ + C
Sbjct: 804 YGLVILGNPRSLAR-NTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ+ AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 407 AQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCA 459
Query: 85 PTNVAIKELAA-------RVVKLVKESVE 106
P+NVA+ LAA +VV+L +S E
Sbjct: 460 PSNVAVDHLAAKLRDLGLKVVRLTAKSRE 488
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 147/274 (53%), Gaps = 15/274 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 599 VLIDESTQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVIL 657
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G + L++QYRMHP +S FP++ FYE +++ T ++R P+ P F +
Sbjct: 658 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTTQERLRRNVDFPWPVADTPMMFWSN 717
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E S KI+ +KA + + IGI++PY Q I +
Sbjct: 718 LGNEEISASGTSYLNRTEASACEKIITRFFKAGVLPSQ---IGIITPYEGQRSYI---VS 771
Query: 546 SKYVNSA-----GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
S N A ++V S+D FQG E+D I++S VRSN+ IGFL++ +R+NVALTR
Sbjct: 772 SMQTNGALRKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTR 831
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
A+ + ILGN + L+ K +W L+ + C
Sbjct: 832 AKFGVVILGNPKVLS-KHPLWHYLLLHYKDKNCL 864
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV S L + + LI GPPGTGKT T + ++ L + + LVC P+
Sbjct: 437 LNVSQVHAVKSVLSK-------PLSLIQGPPGTGKTVTSATIVYHLAKTNVGQVLVCAPS 489
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L +VV+L +S E
Sbjct: 490 NVAVDQLTEKIHRTGLKVVRLTAKSRE 516
>gi|218195431|gb|EEC77858.1| hypothetical protein OsI_17114 [Oryza sativa Indica Group]
Length = 955
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 100/145 (68%), Gaps = 7/145 (4%)
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
A + + E +S+GI+ PY+AQV AIQ + + + V+V S+DGFQG EED+II+ST
Sbjct: 785 ACVGTGEGVSVGIICPYAAQVEAIQSGIDANALRP--LDVRVNSVDGFQGSEEDIIILST 842
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VRSN+ GSIGFLSN +R NVALTRARHCLWILG+A TL SVW LV DA R+CF++
Sbjct: 843 VRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRRCFYD 902
Query: 637 ADDDKDLGKAILAVKKEL--DELDE 659
DD G +L V + DELD+
Sbjct: 903 WDDG---GAGLLGVARRGHEDELDD 924
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 33/259 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVILL-----QMKF 78
LNDSQA A+ SC+ ++ + +T LIWGPPGTGKTKT+S+LL++L+ Q ++
Sbjct: 535 LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRY 594
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN AI ++A+R++ L K+ A GD+LL GN +R+ +D ++E+
Sbjct: 595 RVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEV 651
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
+LD RVK L CF+P +GW H +S+ FL ++L YI +
Sbjct: 652 FLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYI------------------Q 693
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
C + D P FVR RF I L C + +PK I + N++ + L +
Sbjct: 694 AC---IALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTT 750
Query: 259 LLDSFETLLFEDNLVSEEL 277
+L++F LL +++ +E+
Sbjct: 751 MLENFRKLLSKNSAAGDEV 769
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 33/249 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVILL-----QMKF 78
LNDSQA A+ SC+ ++ + +T LIWGPPGTGKTKT+S+LL++L+ Q ++
Sbjct: 53 LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRY 112
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN AI ++A+R++ L K+ A GD+LL GN +R+ +D ++E+
Sbjct: 113 RVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEV 169
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
+LD RVK L CF+P +GW H +S+ FL ++L YI +
Sbjct: 170 FLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYI------------------Q 211
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
C + D P FVR RF I L C + +PK I + N++ + L +
Sbjct: 212 AC---IALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTT 268
Query: 259 LLDSFETLL 267
+L++F LL
Sbjct: 269 MLENFRKLL 277
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ +K + +A +SLFERL L
Sbjct: 612 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 670
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
L+ QYRMHP +S FP++ FY+ +++ T +R P+ P F +
Sbjct: 671 RLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSN 730
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V K++ +KA + ++ IG+++PY Q +V+ +
Sbjct: 731 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQD---IGVITPYEGQRSYIVSTMQ 787
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ + + V+V S+D FQG E+D I++S VRS++ IGFLS+ +R+NV LTRA+
Sbjct: 788 NTGT-FKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVGLTRAK 846
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L+ K +W L+ R+C
Sbjct: 847 YGLVILGNPKVLS-KHELWHHLLVHFKDRKCL 877
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ A+ + L + + LI GPPGTGKT T + ++ L + + LVC P+
Sbjct: 450 LNQSQISAIKAVL-------QTPLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPS 502
Query: 87 NVAIKELAAR-------VVKLVKESVE 106
NVA+ +L R VV+L +S E
Sbjct: 503 NVAVDQLCERIHRTGLKVVRLTAKSRE 529
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S F ++ FYE +++ T +R + P+ F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQN 733
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G EE N E S V K++ +K+ + + IG+++PY Q +A +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ ILGN + L+ K +W L+ + CF
Sbjct: 851 GVVILGNPKVLS-KHPLWLYLLSHYKEKGCF 880
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 453 LNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 505
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ L +VV+L +S E
Sbjct: 506 NVAVDHLCEKIHQTGLKVVRLAAKSRE 532
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 9/271 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S F ++ FYE +++ T +R + P+ F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQN 733
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVAIQEK 543
G EE N E S V K++ +K+ + + IG+++PY Q +A +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ ILGN + L+ K +W L+ + CF
Sbjct: 851 GVVILGNPKVLS-KHPLWLYLLSHYKEKGCF 880
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 453 LNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 505
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ L +VV+L +S E
Sbjct: 506 NVAVDHLCEKIHQTGLKVVRLAAKSRE 532
>gi|307194974|gb|EFN77064.1| Probable helicase senataxin [Harpegnathos saltator]
Length = 1415
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 163/317 (51%), Gaps = 38/317 (11%)
Query: 341 LKRASLFLSTASSSYM-----LHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
L A + T SS Y + E L+ ++DEA Q E+E+ IPL L G+ VL
Sbjct: 1104 LAGADIIACTLSSCYTNQMESIFGANREKLSVCIVDEATQSCEAETLIPLML-GVNTLVL 1162
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-----LLSIQYRMHPSISCFPNS 450
GD QLPA + S+ + + +S+F R+ S+ +L QYRM SIS +PN
Sbjct: 1163 VGDPNQLPATILSQRAKKLGLDQSIFSRMQRAFTSQTNNPIIMLDTQYRMAYSISYWPNR 1222
Query: 451 YFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI--NVFGGREEFIEHSCRNMVEVSVVM 508
YFY+ K+++++ +R + P + PY + N + F N E V
Sbjct: 1223 YFYDCKLKNATELR--------ISFPFH-PYRVLSHNSVQNNDRF-----SNTTEAEFVS 1268
Query: 509 KIL--LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVN-----SAGFAVKVMSI 561
++ + +Y W D+ E +++G+++PY+ Q + K+ K N A +V ++
Sbjct: 1269 NMIYAMLIYAKWEDTNEPVTLGVLTPYNNQRTVVLNKINEKISNLPENMRKKIAYEVNTV 1328
Query: 562 DGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
D FQG E D+II+S VRS+ IGF+S+ +R+ VALTRA+H L + GN T K +W
Sbjct: 1329 DSFQGQERDIIIMSCVRSH---GIGFMSDKQRLCVALTRAKHSLILCGNFNTFM-KDQMW 1384
Query: 622 EALVHDANARQCFFNAD 638
+L+ DA +R N D
Sbjct: 1385 NSLLSDARSRGVLCNVD 1401
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL---------QMKF 78
LN Q +AV + +A + LI GPPGTGK+K + L+ +L K
Sbjct: 894 LNQKQLEAVFRVTDAV-MKKQAKLCLIQGPPGTGKSKVIVNLVAQILYGEREHSNASEKN 952
Query: 79 RTLVCTPTNVAIKELAARVV 98
+ L+C P+N AI E+ R++
Sbjct: 953 KILLCAPSNAAIDEIVTRLL 972
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 10/264 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++IDE+ Q E ES IP+ + G K +L GD QL ++ + +A +SLFERL
Sbjct: 562 YVLIDESTQPSEPESLIPI-VKGAKQVILVGDHQQLGPVILHNGAAKAGLRQSLFERLIK 620
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFIN 485
LG+ L +QYRMHPS+S FP++ FY+ +++ + +R + P G P F +
Sbjct: 621 LGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRRSSFPWPAPGIPLLFWS 680
Query: 486 VFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G E I S N E KI+ L I + IG+++PY Q I + L
Sbjct: 681 SYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQ---IGVITPYQGQRDYIVQYL 737
Query: 545 ---GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
G+ V+V S+D FQG E+D II S RSN+ +IGFL +++R+NVA+TRA
Sbjct: 738 LMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLKDARRLNVAITRA 797
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
++ L++LGN +TL +K +W L+
Sbjct: 798 KYGLFVLGNIKTL-QKDPLWNRLL 820
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCT 84
+ LN SQ AV S L+Q + LI GPPGTGKT T + ++ L + K + LV
Sbjct: 400 TQLNPSQVNAVKSVLQQR-------LSLIQGPPGTGKTVTSATIVYHLAKSKKKKVLVTA 452
Query: 85 PTNVAIKELAARV 97
+N+A+ LA+++
Sbjct: 453 SSNIAVDHLASKL 465
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 143/282 (50%), Gaps = 42/282 (14%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGR----SLFER 423
+++DEA Q E+ + +PL L+GI+ VL GDE QLP S+ + F R S E
Sbjct: 651 VIMDEATQATEASTLVPLALAGIQKLVLVGDEKQLPPFALSRNPKTSLFNRVVTRSPAED 710
Query: 424 LSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSF 483
L +L IQYRMHP+I FPN FY+N++R+ T RS+ + P F
Sbjct: 711 LQFL-------KIQYRMHPAICEFPNMQFYDNRLRNGVTPEDRSWLG------VQEPVVF 757
Query: 484 INVFGGREEFIEHSCR------NMVEVSVVMKILLNLYKAWIDSKEKLS---IGIVSPYS 534
I++ E + + N+ E V L L SK+ + IG+++PY
Sbjct: 758 IDIPSSAERRGQAAASQDMSWCNLAEADFVCATLRKLV-----SKKHVPPSQIGVITPYV 812
Query: 535 AQVVAIQEKLGSKYVNSAGFAVK-----------VMSIDGFQGGEEDLIIISTVRSNNGG 583
AQ AI +L +A + V S+D FQG E II S VRSN+ G
Sbjct: 813 AQRDAIASRLARDTTLAAHVTMHEVADPDSKQLMVASVDAFQGHERAFIIFSCVRSNSDG 872
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
+GF+S+ +R+NVALTRAR+ L ++G+A TL + +W A +
Sbjct: 873 QLGFVSDRRRMNVALTRARNGLIVVGHADTLAKGSKIWRAYI 914
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 149/284 (52%), Gaps = 39/284 (13%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E L F V+DEA Q E + I LS AVL GD QLP V S+ + +A S
Sbjct: 254 LEDLTFPVTVLDEATQCTEPAALI--ALSKALSAVLVGDSRQLPPTVVSRDAVDAGLQIS 311
Query: 420 LFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG 479
+FER+ LG LL +QYRMHP I+ FP+ FY K+ + T + R
Sbjct: 312 IFERMERLGVKVSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGVAWPKPNV 371
Query: 480 PYSFINVFGGREEFIEHSCR--------NMVE----VSVVMKILLNLYKAWIDSKEKLSI 527
P F+ E + CR N+ E ++VV KIL A D I
Sbjct: 372 PVVFL-------EINDAECRAPDGNSLYNVEEAKTAITVVKKIL-----ASGDLAGPGDI 419
Query: 528 GIVSPYSAQVVAIQEK---LGSKYVNSAGFA-------VKVMSIDGFQGGEEDLIIISTV 577
G++SPY+AQV +QE+ LG+ N + +++ S+DGFQG E+++I++ TV
Sbjct: 420 GVISPYAAQVRLLQEEYGVLGTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTV 479
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
RSN GG IGF+ + +R+NV +TRAR L +LGN RTL+ + +W
Sbjct: 480 RSNTGGGIGFVDDPRRLNVGITRARRGLIVLGNRRTLSTNE-IW 522
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 10/264 (3%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++IDE+ Q E ES IP+ + G K +L GD QL ++ + +A +SLFERL
Sbjct: 536 YVLIDESTQPSEPESLIPI-VKGAKQVILVGDHQQLGPVILHNGAAKAGLRQSLFERLIK 594
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFIN 485
LG+ L +QYRMHPS+S FP++ FY+ +++ + +R + P G P F +
Sbjct: 595 LGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRRSSFPWPAPGIPLLFWS 654
Query: 486 VFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+G E I S N E KI+ L I + IG+++PY Q I + L
Sbjct: 655 SYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQ---IGVITPYQGQRDYIVQYL 711
Query: 545 ---GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
G+ V+V S+D FQG E+D II S RSN+ +IGFL +++R+NVA+TRA
Sbjct: 712 LMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLKDARRLNVAITRA 771
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
++ L++LGN +TL +K +W L+
Sbjct: 772 KYGLFVLGNIKTL-QKDPLWNRLL 794
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCT 84
+ LN SQ AV S L+Q + LI GPPGTGKT T + ++ L + K + LV
Sbjct: 374 TQLNPSQVNAVKSVLQQR-------LSLIQGPPGTGKTVTSATIVYHLAKSKKKKVLVTA 426
Query: 85 PTNVAIKELAARV 97
+N+A+ LA+++
Sbjct: 427 SSNIAVDHLASKL 439
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAM-EPLNFLVIDEAAQLKESESTIPLQLSGIKHAV 394
+KS + A + ST S H + M E +V+DEA Q E IPL L +
Sbjct: 425 IKSRLISEADVICSTCIGSG--HEMLMDEKFQIIVVDEATQATEPAILIPL-LKSSEQMY 481
Query: 395 LFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
LFGD+ QL ++ S + E S+F+RL G + LL+ QYRMH SIS FP +FY
Sbjct: 482 LFGDQNQLAPIILSHKAIEGGLNISMFDRLFKSGLTPFLLNTQYRMHSSISDFPRHHFYN 541
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL 514
+ + + + P FI++ GREE HS N E V+++ +L
Sbjct: 542 GLLNNGTNDSNLKIPIGIKWPQIDFPVVFIDISNGREEIKHHSLYNNEEAVAVVQVAESL 601
Query: 515 YKAWIDSKEKL---SIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
+++ E L +IGI++PY AQV I + S + G V ++D +QG E D+
Sbjct: 602 ----LENDESLFRNNIGIITPYHAQVKHINQVF-SNDKSWRGAQPSVATVDSYQGREMDV 656
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV-WEALVHDANA 630
II STVRSN G+IGFL + +R+NV++TRA+ L ++GN T+ W+A V A
Sbjct: 657 IIFSTVRSNTKGNIGFLKDWRRLNVSITRAKRGLVVIGNFGTINNSSDEHWKAYVQWAKD 716
Query: 631 RQCFFNADD 639
+ + D
Sbjct: 717 KNIMVKSLD 725
>gi|397569654|gb|EJK46882.1| hypothetical protein THAOC_34429 [Thalassiosira oceanica]
Length = 1051
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 152/307 (49%), Gaps = 28/307 (9%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+++ L + L+T ++ A +V+DEAAQL G KHA+L
Sbjct: 712 IETHVLDSVHIVLTTLGTAGARSLEAASKFEVVVVDEAAQL------------GSKHAIL 759
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA + + F RSLF+RL G+ HLL QYRMHP IS FP FY+
Sbjct: 760 VGDPQQLPATIFNVSGKTTKFDRSLFQRLEEAGHEVHLLDTQYRMHPMISLFPRRIFYDG 819
Query: 456 KIRDSSTVRKRSYE---KR--FLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKI 510
K+ D V+ Y KR F + P++ +++ E+ S N E + + +
Sbjct: 820 KLLDGPNVKHPEYGSPLKRTIFRSFGAFQPFTILDL-ESTEDRAGTSMANTAEAQLALHL 878
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK----LGSKYVNSAGFAVKVMSIDGFQG 566
NL A + + +++PYS Q ++ LGS+Y S V++ S+D FQG
Sbjct: 879 FQNLRSA-TGGQLGSRVAVITPYSQQAALLRRTFSSGLGSEYERS----VEISSVDAFQG 933
Query: 567 GEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
E ++I S VR+ IGFL++ +R+NVALTRA+H L+++ ++ R W LV
Sbjct: 934 REAHIVIFSCVRAAGSKGIGFLADVRRMNVALTRAKHFLFVIARCSSI-RVNPYWRDLVK 992
Query: 627 DANARQC 633
A+ +
Sbjct: 993 HASGQSA 999
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 148/274 (54%), Gaps = 25/274 (9%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + AVL GD QL S + EA F +S+FER +
Sbjct: 687 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 741
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSF 483
+ + +L QYRMHP+I+ F N FY K+ + R ++ P Y P F
Sbjct: 742 ANTQIKRTMLKTQYRMHPAIAEFSNKMFYSFKLENGVDGEDRFDDRIINFFPDYTNPIMF 801
Query: 484 INVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
IN GRE++ S N EV ++ +I+ L K + E IGI+SPY AQ I
Sbjct: 802 INC-DGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNKVKENE---IGIISPYQAQQELIS 857
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ + +K +KV +IDGFQG E++ II S VRSN IGF+++ KR+NVALTRA
Sbjct: 858 QCVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGIGFVNDYKRLNVALTRA 909
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
+ L ++GN +TL K VW LVH R F
Sbjct: 910 KCGLIVIGNIQTLIGSK-VWSMLVHHFYLRDALF 942
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--- 78
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K
Sbjct: 403 PNLSN-LNDYQIKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKHRFY 454
Query: 79 -------RTLVCTPTNVAIKELAARVVK 99
R LVC +N A+ + +++++
Sbjct: 455 NRNRAERRLLVCASSNNAVDVICSKLIE 482
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 19/279 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFERL L
Sbjct: 607 VLIDESTQATEPEILVSI-MRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLL 665
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FY+ +++ T R H P +F
Sbjct: 666 GIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHC 725
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ------VVA 539
G EE N E + V K++ L KA + + IG+++ Y Q +
Sbjct: 726 SGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQ---IGVITSYEGQRSFIVNYMH 782
Query: 540 IQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Q L SK Y N V++ S+D FQG E+D II++ VRSN+ IGFLS+ +R+NVA+
Sbjct: 783 TQGTLNSKLYEN-----VEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAI 837
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
TRA++ L ++GNA+ L R +W L++ +++ +
Sbjct: 838 TRAKYGLVLVGNAKVLAR-HDLWHELINHYKSKEMLYEG 875
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCTPT 86
LN SQ QAV L + + LI GPPGTGKT + ++ L+Q + LVC+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 87 NVAIKELAARVVK 99
N+A+ LA ++ K
Sbjct: 499 NIAVDHLAEKIHK 511
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++IDEA Q E E+ IPL + G K L GD CQL +V S + F RSLFERL
Sbjct: 560 YVLIDEATQGTEPETLIPL-VRGAKQVFLVGDHCQLRPVVFSIAAERTGFRRSLFERLLM 618
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G+ L +QYRMHP +S F + +FYE +++ T +R + F P+ F N
Sbjct: 619 MGHRPLRLDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQVFPWPDGTRPFFFYNS 678
Query: 487 FGGREEFIEHSCR-NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E S N E ++ +++ L + S + IG+++PY +Q ++
Sbjct: 679 TGPEELGANGSSYLNRTEAALAEQVVTKLIRDGGVSPD--GIGVITPYRSQCRFLR---- 732
Query: 546 SKYVNSAGF-------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
Y++ GF V+V S+D FQG E++ II S VRSN+ IGF + +R+NV+L
Sbjct: 733 -NYLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVRSNHRQGIGFAVDGRRLNVSL 791
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVH 626
TRA+ L I+GN + +R + E LVH
Sbjct: 792 TRAKRGLIIMGNVQLFSRYPNWNELLVH 819
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 19/115 (16%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKT-VSMLLVILLQMKFRTLVCT 84
S LN+SQ QAV + L K + LI GPPGTGKT T V+++ + ++K + LVC
Sbjct: 393 SNLNNSQEQAVRTAL-------KKPLTLIQGPPGTGKTSTSVAIVSQLYERVKTQILVCA 445
Query: 85 PTNVAIKELAARV--VKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEE 137
P+NVA+ LA R+ L ++ CRD + + ERL +D+ VE+
Sbjct: 446 PSNVAVDHLAERLEAAGLNVVRLQPRCRDVISVAV---------ERLGLDNQVED 491
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 11/264 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IP L G K +L GD CQL +V K + A +SLFERL L
Sbjct: 479 ILIDESTQATEPECMIPAVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 537
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +RS + P
Sbjct: 538 GIRPIRLQVQYRMHPILSSFPSNIFYEGSLQNGVTPGERSNKSLDFPWPQTDKPMLFYAT 597
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI + I ++ IGI++PY Q +V +
Sbjct: 598 TGQEEIASSGTSYLNRTEAANVEKITTRFLRCGIRPEQ---IGIITPYEGQRSFIVQYMQ 654
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + +++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTR +
Sbjct: 655 HNGSLHAKLYQ-EIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDPRRLNVALTRCK 713
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ I+GN + L+ K+++W L++
Sbjct: 714 FGIIIVGNPKVLS-KQALWNHLLN 736
Score = 47.4 bits (111), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L + + LVC P+
Sbjct: 317 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATVVYHLSKQNLGQVLVCAPS 369
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 370 NIAVDQLTEKI 380
>gi|167384737|ref|XP_001737082.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900358|gb|EDR26702.1| hypothetical protein EDI_272190 [Entamoeba dispar SAW760]
Length = 1001
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 150/275 (54%), Gaps = 27/275 (9%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFGRSLFER-L 424
++DEAAQ E E+ L+GI + AVL GD QL S + EA F +S+FER +
Sbjct: 635 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 689
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMY-GPYS 482
+ + +L QYRMHP+I F N FY +K+ + + R ++ R ++ P Y P
Sbjct: 690 ANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLENGVSNEDR-FDSRIINFFPDYTNPIM 748
Query: 483 FINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
FIN GREE S N EV ++ I+ L K + E IGI+SPY AQ I
Sbjct: 749 FINC-DGREECGSSGTSYNNEGEVLIIKHIVGGLLKNKVKENE---IGIISPYQAQQELI 804
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
+ + +K +KV +IDGFQG E++ II S VRSN IGF+S+ KR+NVALTR
Sbjct: 805 SQCVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGIGFVSDYKRLNVALTR 856
Query: 601 ARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
A+ L ++GN +TL K VW LVH R F
Sbjct: 857 AKCGLIVIGNIQTLIGSK-VWSMLVHHFYLRDALF 890
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF--- 78
P+LS+ LND Q +A+ + L + I L+ GPPGTGKT + L+ K
Sbjct: 360 PNLSN-LNDYQIKAIYNALNE-------DISLVIGPPGTGKTTVAVSIAQYLIYNKHRFY 411
Query: 79 -------RTLVCTPTNVAIKELAARVVK 99
R LVC +N A+ + +++++
Sbjct: 412 NRNRAERRLLVCASSNNAVDVICSKLIE 439
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 145/283 (51%), Gaps = 28/283 (9%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 608 VLIDEATQAAEPECMIPLIL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 666
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 667 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 726
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E S V KI+ +K+ + + IG+++PY Q I
Sbjct: 727 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYI----- 778
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 779 ---VNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 835
Query: 596 VALTRARHCLWILGNARTLTR----KKSVWEALVHDANARQCF 634
VALTRA++ + ILGN + L++ + +W L+ + C
Sbjct: 836 VALTRAKYGVVILGNPKVLSKLTRLQHPLWHYLLTHYKEKNCL 878
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 446 LNHSQMFAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 498
Query: 87 NVAIKELAARV----VKLVKESVERDCRDAL 113
NVA+ +L ++ +K+V+ S + R+AL
Sbjct: 499 NVAVDQLTEKIHATGLKVVRLSAK--SREAL 527
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 17/307 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q KE E IP+ ++G + VL GD CQL +V + + A RSLFERL L
Sbjct: 336 VLIDESTQAKEPECLIPI-VTGARQVVLVGDHCQLGPVVICEEAARAGLNRSLFERLVIL 394
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S P++ FYE +++ T ++R E P F
Sbjct: 395 GNQPIRLQVQYRMHPLLSLLPSNLFYEGTLQNGVTEQERILEAGDFRWPNPTVPMFFWCT 454
Query: 488 GGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI-QEKL 544
+EE S N E + + KI ++ + + + IGI++PY AQ I + L
Sbjct: 455 LSQEEKPRSGKSFLNRAEAAHIEKIATKFLRSGVRADQ---IGIITPYEAQRAHIVKHML 511
Query: 545 GSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
S +N+ + ++V S+D FQG E+D+I++S VRSN IGFL++S+R+NVALTRAR+
Sbjct: 512 HSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNKDNKIGFLNDSRRLNVALTRARY 571
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNA--------DDDKDLGKAILAVKKELD 655
L I+GN + L+ + +W +L+ C + D + GK+ L V +
Sbjct: 572 GLIIVGNPKVLSH-QPMWNSLLRFCRENHCLLHGPLNALKEYKVDFNKGKSNLPVTNTVT 630
Query: 656 ELDELLN 662
D LLN
Sbjct: 631 SNDMLLN 637
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 25/134 (18%)
Query: 17 NETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM 76
N P L LN SQ AV L + +I LI GPPGTGKT T + ++ L +
Sbjct: 164 NHYSAPGLPE-LNHSQVMAVREVLTR-------SISLIQGPPGTGKTVTSASIVYHLAKA 215
Query: 77 KFRT-LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGV 135
+ LVC+P+NVAI +LA ++ + V R C + R K+DS V
Sbjct: 216 RGTPILVCSPSNVAIDQLAEKISR-TGLRVIRTCAKS---------------REKIDSPV 259
Query: 136 EEIYLDYRVKRLAD 149
+ L +V+RL +
Sbjct: 260 GFLTLHQQVRRLVE 273
>gi|168044414|ref|XP_001774676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673976|gb|EDQ60491.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 911
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 20/289 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPL-----QLSGIKHAVL------------FGDECQLPAMVE 407
+ ++IDEAAQ E + +PL Q+ K A L GD QLPA V
Sbjct: 545 FDVVIIDEAAQAVEPSTLVPLVHGCRQVLASKVAELSFASLEFHMTMQVGDPLQLPATVL 604
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
S + +G S+F+RL GY +L QYRMHP I FP+ FYE + D V +R
Sbjct: 605 STKAVSHGYGMSMFKRLQKAGYPVKMLKTQYRMHPLIRAFPSKEFYEGALEDGDDV-ERV 663
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFI-EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
+ + +GPY+F ++ G + S N EV V+ + +L + + K +
Sbjct: 664 TSRPWHEHRCFGPYTFFDIDGEESQPPGSGSWVNKDEVEFVLVLYRHLVALYPELKGSPT 723
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG 586
+ ++SPY QV ++++ V + ++DGFQG E+D+ I S VR+ G SIG
Sbjct: 724 VAVISPYKLQVKLLRQRFTEVLGKETARLVDINTVDGFQGREKDIAIFSCVRATEGKSIG 783
Query: 587 FLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
F+S+ +R+NV LTRAR + ++G A+ L K W LV + R +
Sbjct: 784 FVSDFRRMNVGLTRARASMLVVGCAKALKIDKH-WRNLVTSSIERHRLY 831
>gi|218195422|gb|EEC77849.1| hypothetical protein OsI_17103 [Oryza sativa Indica Group]
Length = 534
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 33/259 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT----IQLIWGPPGTGKTKTVSMLLVILL-----QMKF 78
LNDSQA A+ SC+ ++ + +T LIWGPPGTGKTKT+S+LL++L+ Q ++
Sbjct: 252 LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRY 311
Query: 79 RTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEI 138
R L C PTN AI ++A+R++ L K+ A GD+LL GN +R+ +D ++E+
Sbjct: 312 RVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCHGDLLLFGNKDRMGIDGDLKEV 368
Query: 139 YLDYRVKRLADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDINGDIIKEK 198
+LD RVK L CF+P +GW H +S+ FL ++L YI +
Sbjct: 369 FLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYI------------------Q 410
Query: 199 ECGKEADVSDVEIKPFLEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLIS 258
C + D P FVR RF I L C + +PK I + N++ + L +
Sbjct: 411 AC---IALKDGTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTT 467
Query: 259 LLDSFETLLFEDNLVSEEL 277
+L++F LL +++ +E+
Sbjct: 468 MLENFRKLLSKNSAAGDEV 486
>gi|321479359|gb|EFX90315.1| hypothetical protein DAPPUDRAFT_309786 [Daphnia pulex]
Length = 1738
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 172/322 (53%), Gaps = 46/322 (14%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPL--------NFL--VIDEAAQLKESESTIPL 385
+K + RA + +T +S S ME L +FL ++DEA+Q E ES PL
Sbjct: 1411 MKKHLISRAQIICTTLNS---CRSREMETLFIEERSSKSFLCCILDEASQCTEPESLTPL 1467
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL------------ 433
GI VL GD QLPA V S+V+ + F +SLF R YS +
Sbjct: 1468 AF-GISKLVLIGDPDQLPATVTSQVAAKNRFDQSLFNRF----YSNRMITNRENEEGVMM 1522
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEF 493
L+ QYRM PSI +P+ YFY K+ + E +GP Y Y +NV G E+
Sbjct: 1523 LNTQYRMAPSICEWPSKYFYGGKLV--------TAEGLIRNGPCYE-YRVLNVIDGLEQL 1573
Query: 494 IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAG 553
+ S +N E ++V KI++ + + + + S+G+++ Y +Q I +K+ +
Sbjct: 1574 ADQSFKNEKEATLVAKIVMLIVNSPLTRGK--SVGVITFYRSQQQCIVKKMTEEVNRINA 1631
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRS----NNGGSIGFLSNSKRVNVALTRARHCLWILG 609
V+V ++D FQG E+D++I+S VR+ N GG IGF+S+ +R+NVA+TRA+ L + G
Sbjct: 1632 SRVEVNTVDSFQGREKDIVIVSCVRAREVRNLGGDIGFVSSLQRMNVAMTRAKESLIVCG 1691
Query: 610 NARTLTRKKSVWEALVHDANAR 631
+ +TL ++ W+ L+++A +R
Sbjct: 1692 HFQTLQMNET-WQDLINNARSR 1712
Score = 57.4 bits (137), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 28 LNDSQAQAVLSCLRQMRC--DHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF------- 78
LN Q QAV S R M C D + + L+ GPPGTGK+ + L+ ++ M +
Sbjct: 1205 LNPCQYQAVESITRTMVCASDREPKVALLQGPPGTGKSHVIVELISRMMFMHYEKTSSFP 1264
Query: 79 RTLVCTPTNVAIKELAARVV 98
R LVC P+N AI E+A R++
Sbjct: 1265 RILVCAPSNNAIDEIANRLM 1284
>gi|301123753|ref|XP_002909603.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100365|gb|EEY58417.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 777
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 179/356 (50%), Gaps = 49/356 (13%)
Query: 327 VEKDLLEDLL-------------KSFCLKRASLFLSTASSSYMLHSVAM----EPLNFLV 369
VE+ LLE L+ + +K A + T S + SVAM + + L+
Sbjct: 412 VEEVLLESLVTKHRSTFPTAKQARQAIIKNAQIVFCTLSGA---GSVAMCEFAQDFDALI 468
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGY 429
IDEAAQ E+ + IP + VL GD QLPA V SK + RSL +RL G
Sbjct: 469 IDEAAQAVEASTLIPFKFRP-HRVVLVGDHRQLPATVISKSLVSMGYDRSLQQRLVENGS 527
Query: 430 SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG 489
LL+ QYRMHP IS FP++YFY ++ +R+ + + + H + P F++V G
Sbjct: 528 PVLLLNQQYRMHPEISEFPSAYFYGGRLVQDDNMREWTTQD-YHHDRAFKPLLFLDVQGA 586
Query: 490 REEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKY 548
+ + S RNM EV V++++ L + + K IG+++PY Q+ ++ +G
Sbjct: 587 QTQVNGSTSLRNMSEVEAVIQLVRRLLTKFPRIEWKKRIGVIAPYKQQIYEVRGAVGKLE 646
Query: 549 VN-SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI----------------GFLSNS 591
++V ++DGFQG E+++II S VR++ GG F ++
Sbjct: 647 AEFDRHLGIEVNTVDGFQGREKEIIIYSCVRTSYGGRRKRKKRNRGNEDDDVLDAFWADE 706
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAI 647
+R+NVA+TRA+ LWI+GN++ L + ++ W AL+ D D+ +G ++
Sbjct: 707 RRMNVAITRAKSSLWIVGNSKLLNQSRA-WRALIQHTK--------DHDRYIGDSV 753
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 43/106 (40%), Gaps = 42/106 (39%)
Query: 29 NDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-------------- 74
NDSQ A+L CL + D + IQ GPPGTGKTKT+ LL LL
Sbjct: 258 NDSQVLAILGCLGE---DSRVIIQ---GPPGTGKTKTILGLLSALLDGAGLATLQKTKGT 311
Query: 75 ----------------------QMKFRTLVCTPTNVAIKELAARVV 98
+ R LV P+N A+ EL RV+
Sbjct: 312 TRIRVGASLQNARASAVSKTVAETSIRVLVAAPSNAAVDELVLRVL 357
>gi|67596220|ref|XP_666063.1| SEN1 protein [Cryptosporidium hominis TU502]
gi|54656975|gb|EAL35833.1| SEN1 protein [Cryptosporidium hominis]
Length = 994
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 36/288 (12%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA+Q E + IPL+L G K +L GD QLPA V S+ + E + SLF+RL
Sbjct: 561 VIIDEASQGVELSTLIPLKL-GCKRLILVGDPKQLPATVLSRRAIERKYDISLFQRLQMS 619
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTV-RKRSYEKRFLHGPMYGPYSFINV 486
G +LS+QYRMHP IS FP+ +FY+ ++ D + R+ + P++ P++F +V
Sbjct: 620 GQQVVMLSVQYRMHPQISAFPSKHFYDGELHDYKDILETRAPVVAWQDIPIFKPFTFFSV 679
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---------------IGIVS 531
EE S N +E V +IL L + ++KL+ I ++S
Sbjct: 680 --NSEEEQGKSISNPLEADFVCQILELLGLILYEHQKKLTENTDLGEPSKRWYERIAVIS 737
Query: 532 PYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRS--------NN 581
PY+ QV I++K+ K+ S + V ++DGFQG E+D II S VRS NN
Sbjct: 738 PYNEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRSQYIEEDSLNN 797
Query: 582 GG----SIGFLSNSKRVNVALTRARHCLWILGNARTL---TRKKSVWE 622
+ GF+++ +R+NVALTRA++ LWI+GN+R L +S+W+
Sbjct: 798 ADDRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWD 845
>gi|440292009|gb|ELP85251.1| hypothetical protein EIN_084130, partial [Entamoeba invadens IP1]
Length = 1022
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 148/278 (53%), Gaps = 23/278 (8%)
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYL 427
+IDEAAQ E E+ + ++ A+L GD QL V S + F +++FERL +
Sbjct: 647 IIDEAAQSLEPETLAGVM--NVRKAILIGDIQQLEPCVTSPKAKALGFDKTMFERLLASE 704
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK--RFLHGPMYGPYSFIN 485
+ LL+ QYRMHP +S F N FY +++ D T RS F+ + P FIN
Sbjct: 705 SVPRTLLNTQYRMHPFLSTFSNKVFYSSRLIDGVTAMDRSDPNVVPFIFKNVKTPLMFIN 764
Query: 486 VFGGREEFIEHSCR---NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
G E+I +S N+ E +V K++ L + + IGI+SPY+ Q
Sbjct: 765 CDGS--EYIGNSGSSFGNVSESKIVNKLVQGLKEKNVADDR---IGIISPYTTQ------ 813
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+++ +KV S+DGFQG E+D II STVRSN IGF+S+ +R+NV+LTRAR
Sbjct: 814 ---RDLLSTISSTIKVASVDGFQGNEKDYIIFSTVRSNKEIGIGFVSDYRRLNVSLTRAR 870
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDD 640
++I+GN TL + VW L + N C F +++
Sbjct: 871 LGMYIVGNVETLAHNR-VWGMLFNYLNKNNCIFKNENN 907
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 142/270 (52%), Gaps = 25/270 (9%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K V+ GD QL ++ +K + A +SLFERL L
Sbjct: 606 VLIDEATQAAEPECMIPLVL-GCKQVVMVGDHQQLGPVIMNKKAARAGLTQSLFERLVLL 664
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 665 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 724
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E S V KI+ +K+ + + IG+V+PY Q I
Sbjct: 725 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQ---IGVVTPYEGQRSYI----- 776
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 777 ---VNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 833
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALV 625
VALTRA++ + ILGN + L+ K +W L+
Sbjct: 834 VALTRAKYGVVILGNPKVLS-KHPLWHYLL 862
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 444 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 496
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L +VV+L +S E
Sbjct: 497 NVAVDQLTEKIHATGLKVVRLTAKSRE 523
>gi|326436738|gb|EGD82308.1| hypothetical protein PTSG_02976 [Salpingoeca sp. ATCC 50818]
Length = 2425
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 150/280 (53%), Gaps = 18/280 (6%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++ L+IDEAAQ E + IPLQ G VL GD QL A V S+ + +A + RSLFER+
Sbjct: 1888 VDLLIIDEAAQCAEPDVLIPLQY-GCARLVLVGDPMQLSATVFSQYARDAGYERSLFERI 1946
Query: 425 --SYLGY-SKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY 481
S + S +L QYRMHP I FPN FYE K+ + V R H + G Y
Sbjct: 1947 HPSMRAWGSAPMLREQYRMHPEICEFPNIMFYEQKLLTAGAVLARKPAP--WHDAL-GAY 2003
Query: 482 SFINV-FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
F +V +G ++ +S N+ E V +I+ + +A + I +V+PY+ Q I
Sbjct: 2004 RFFDVSWGEQKRGGGNSFCNVEEAITVARIIFLIAQAAPAEPLRGKIAVVTPYTHQRQCI 2063
Query: 541 QEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
+ +L + + + V ++D +QG E D+++ S VR+ +GFL+ KR+NVALTR
Sbjct: 2064 KGELARWFGPAVADTISVDTVDAYQGQESDVVVFSCVRTRQ---LGFLTQEKRMNVALTR 2120
Query: 601 ARHCLWILGNA---RTLTRKKSVWEALVHDANAR----QC 633
AR +I+GNA R R+ +W LV +A R QC
Sbjct: 2121 ARLSCYIVGNAYNLRQFNRETLMWSRLVANAQQRSVMGQC 2160
>gi|300176328|emb|CBK23639.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 162/301 (53%), Gaps = 19/301 (6%)
Query: 336 LKSFCLKRASLFLSTASSSYM--LHSVAMEP-LNFLVIDEAAQLKESESTIPLQLSGIKH 392
L+ + + + L+T SSS + + + + P + LV+DEA Q E + IPL ++ K
Sbjct: 26 LEGYLVNNYDIILTTLSSSGLSVISGIPIGPRYSALVVDEACQATEVSTLIPLLINPQK- 84
Query: 393 AVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRM-HPSISCFPNSY 451
VL GD QLPA V S +N+ + SLFERLS + +LL+ QYR HP+I FPN
Sbjct: 85 CVLIGDPKQLPATVIS-ANNQNNYNLSLFERLSNNNHYSYLLNTQYRRCHPNIIAFPNQC 143
Query: 452 FYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG----REEFIEHSCRNMVEVSVV 507
FY+ K+ + V R Y +F + P F N+ G +++ S N EV
Sbjct: 144 FYDGKLMNGENVSGRGYSHQFYESDYFYPVVFYNLCGSNVSEKKDAFSKSYSNESEV--- 200
Query: 508 MKILLNLYKAWID---SKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
+ +LNLY +++ S +S+ I++PY Q + ++ +++ N + V ++D F
Sbjct: 201 -RFVLNLYNTFLNLYPSYSSMSVVILTPYKEQKSLFESRI-AQHPNELVRRLHVFTVDAF 258
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E DL+ STVR+ + +GF+S+ +R+NV+ TR R L+++GN L R + W
Sbjct: 259 QGKEVDLVFYSTVRTGSAYGVGFVSDIRRMNVSFTRPRFGLFVVGNEAKL-RTSTYWNQF 317
Query: 625 V 625
+
Sbjct: 318 I 318
>gi|283046856|gb|ADB04944.1| MIP14162p [Drosophila melanogaster]
Length = 317
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 48/332 (14%)
Query: 339 FCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
C+ RA++ +T SS L + ++ + ++DEA Q E + +P++ G+ H VL GD
Sbjct: 1 MCVTRANIICTTLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGD 58
Query: 399 ECQLPAMVESKVSNEACFGRSLFERLS-------------YLGYSKHL-LSIQYRMHPSI 444
QLPA+V SK + + S+F+R+ +L ++K LS QYRMHP I
Sbjct: 59 MQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEI 118
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV------FGGREEFIEHSC 498
+PN YFYE+++ ++ + P+ PY IN+ G + + I
Sbjct: 119 CRWPNQYFYEDQLINAECTAR-------FASPLI-PYCVINLKYTCDSNGAQNKSIS--- 167
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E V K+L + K ++ S G++SPY Q A+ + + S +
Sbjct: 168 -NNEEARFVAKLLTEMDKHM--PSKRFSYGLISPYQNQCYALSQVIPSH------MNITP 218
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
++D +QG E+D+IIIS R+ GFL+N +R+NVALTR R CL I GN L +
Sbjct: 219 QTVDSYQGLEKDVIIISNARTR---GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KSV 274
Query: 619 SVWEALVHDANARQCFFNADDD--KDLGKAIL 648
+W L+ DA R+ +FN D D DL ++++
Sbjct: 275 EMWRNLLDDARKRKVYFNLDRDDVNDLDRSLI 306
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 9/289 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++ DE+ Q E E+ IP+ + G K V+ GD CQL +V + ++ A +SLFERL ++
Sbjct: 621 VLFDESTQATEPETLIPI-IMGAKQVVMVGDHCQLGPVVTCRSASRAGLSQSLFERLIFM 679
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP +S FP++ FYE +++ T +R+ + P P F
Sbjct: 680 GVQPIRLQVQYRMHPCLSEFPSNAFYEGTLQNGVTEAERADSEDVFPWPCPSKPMLFWAQ 739
Query: 487 FGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G E +S N E V KI+ +L + I +E IG+V+PY Q + L
Sbjct: 740 MGVEEMSASGYSYLNRGEAYAVEKIVTHLLQNGIAPEE---IGVVTPYEGQRAYVVNYLT 796
Query: 546 SKYV--NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
V S V+V S+D FQG E+ II++ VRSN+ IGFL++ +R+NVALTRA+
Sbjct: 797 RTGVLHPSIYQEVEVASVDAFQGREKQYIIVTCVRSNDRQGIGFLNDPRRLNVALTRAKL 856
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKK 652
L I+GN + L ++ + L H + +C ++ L + ++A+ +
Sbjct: 857 GLMIVGNPKVLAKQPLFRDMLQHFRD-NKCLVEGNNINQLNECMVALPQ 904
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 26/124 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK--FRTLVCTP 85
LN SQ AV L+Q + LI GPPGTGKT T S +V L K + +V P
Sbjct: 456 LNHSQIAAVKMVLQQ-------PLSLIQGPPGTGKTVT-SATIVYHLATKGDGQVIVAAP 507
Query: 86 TNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVK 145
+NVA+ +LA ++ K + V R R V+S VE + L Y+V+
Sbjct: 508 SNVAVDQLAEKIEKTGLKVVRIVAR----------------SREHVNSAVEHLALHYQVQ 551
Query: 146 RLAD 149
R+A+
Sbjct: 552 RIAE 555
>gi|332023768|gb|EGI63992.1| Putative helicase senataxin [Acromyrmex echinatior]
Length = 1939
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 185/355 (52%), Gaps = 41/355 (11%)
Query: 297 KYLLHKR--RSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSS 354
+Y L+++ + + L K S +E+N + E+ + + + L+ A++ T SS
Sbjct: 1525 RYSLNRKLFETTVKYELMKSNKSIDEIN---SKERARYQRMSEDIVLQGANIIACTLSSC 1581
Query: 355 YMLHSVAM-----EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
Y ++ E ++ ++DEA Q E+E+ IPL L G+ VL GD QLPA + S+
Sbjct: 1582 YTNQMESLFGGHKERISVCIVDEATQSCEAETLIPLML-GVTTLVLVGDPNQLPATILSQ 1640
Query: 410 VSNEACFGRSLFERLSYLGYSKH-----LLSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
+ + +S+F R+ + S+ +L +QYRM +IS +PN YFY K+++++
Sbjct: 1641 RAKKLGLDQSVFSRIQNVFASQSNNPIIMLDMQYRMEYAISYWPNRYFYGGKLKNAT--- 1697
Query: 465 KRSYEKRF-LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYK--AWIDS 521
Y +F H ++F + ++F N E V I+ + K W +
Sbjct: 1698 --DYRMKFPFHAYRVLDHNFTQNY---DKF-----SNTTEAEFVANIIYTMLKCAKWEST 1747
Query: 522 KEKLSIGIVSPYSAQVVAIQEKLGSKYVN-----SAGFAVKVMSIDGFQGGEEDLIIIST 576
+++G+++PY+ Q + K+ K + + +V ++DGFQG E D+II+S
Sbjct: 1748 STTITLGVLTPYNNQRTLVLNKINEKISSVPDDTKKKISFEVNTVDGFQGQERDVIIMSC 1807
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
VRS IGFLS+ +R+ VALTRA+H L + GN RT + K +W+AL+ DA R
Sbjct: 1808 VRS---SGIGFLSDKQRLCVALTRAKHSLILCGNFRTFMKDK-MWKALLTDARNR 1858
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 17 NETFGPS---LSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL 73
NE F S LN Q +AV + +A + I GPPGTGK+K + L+ +
Sbjct: 1355 NEHFTSSSLVTKEDLNSKQLEAVFRVTNAV-IKKEAKLCFIQGPPGTGKSKVIVNLVAQI 1413
Query: 74 L------QMKFRTLVCTPTNVAIKELAARVVKL 100
L + R L+C P+N AI E+ R++ +
Sbjct: 1414 LYGACQDKKSLRILICAPSNAAIDEIVIRLLHI 1446
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 147/272 (54%), Gaps = 11/272 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSNEACFGRSLFERLSY 426
++IDE+ Q E E IP+ + G K +L GD QL P ++E K S +A +SLFERL
Sbjct: 568 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAS-DAGLKQSLFERLIS 625
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFIN 485
LG+ L +QYRM+P +S FP++ FYE +++ T +R+ P+ G P F
Sbjct: 626 LGHIPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTEEQRTLANSTFPWPINGIPMMFWA 685
Query: 486 VFGGREEFIEH-SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-- 542
+G E S N E +I+ L++ D + IG+++PY Q + +
Sbjct: 686 NYGSEEMSANGTSYLNRTEAMNCERIITRLFR---DGVKPEQIGVITPYEGQRAYVLQYM 742
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
++ V+V S+D FQG E+D II+S VR+N IGFL + +R+NV LTRA+
Sbjct: 743 QMNGALDKELYSNVEVASVDAFQGREKDFIILSCVRANEQQMIGFLRDPRRLNVGLTRAK 802
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN R+L+R ++W L+ + C
Sbjct: 803 YGLIILGNPRSLSR-NTLWNHLLLHFRQKGCL 833
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCT 84
+ LN SQ++AV L++ + LI GPPGTGKT T + ++ L ++ K R LVC
Sbjct: 406 TKLNASQSKAVEHVLQR-------PLSLIQGPPGTGKTVTSASIVYHLSKIRKDRILVCA 458
Query: 85 PTNVAIKELAARVVKL 100
P+N+A+ LAA++ L
Sbjct: 459 PSNIAVDHLAAKLRDL 474
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 142/265 (53%), Gaps = 11/265 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E ES IP+ L G K VL GD QL ++ K + +A +SL+ERL L
Sbjct: 575 VLIDEATQATEPESLIPIVL-GAKQLVLVGDHQQLGPVIMCKGAAKAGLTQSLYERLVAL 633
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE--KRFLHGPMYGPYSFIN 485
G L +QYR HP +S FP++ FYE +++ + +R E RF P F
Sbjct: 634 GIRPIRLQVQYRSHPCLSEFPSAMFYEGTLQNGVSEGERDLEGEPRFPWPNPEAPMMFY- 692
Query: 486 VFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
V G EE N E + + +++ + K +D + IG+++PY Q +
Sbjct: 693 VCAGAEEMSASGTSFLNRSEAASIERLVTHYLKLGLDPDQ---IGVITPYEGQRAYVVHH 749
Query: 544 LGSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ S A V+V S+D FQG E+D+II+S VRSN IGFL++ +R+NVALTRA
Sbjct: 750 MASAGALRADVYERVEVASVDSFQGREKDVIILSCVRSNEHQGIGFLNDPRRLNVALTRA 809
Query: 602 RHCLWILGNARTLTRKKSVWEALVH 626
++ L ILG AR L + E L H
Sbjct: 810 KYGLVILGAARVLAQDALWHELLTH 834
Score = 46.6 bits (109), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RTLVCTPT 86
LN SQA AV S + Q + LI GPPGTGKT T + ++ L + + LV P+
Sbjct: 411 LNHSQAAAVRSVVTQ-------PLSLIQGPPGTGKTVTSAAIVWHLAKQGMGQVLVTAPS 463
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
N+A+ +L +VV+L +S E
Sbjct: 464 NIAVDQLTEKIHATGLKVVRLCAKSRE 490
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 17/273 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL ++ K + +A +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP++S FP++ FYE +++ +R P+ P F +
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNG----ERQLIGIDWQWPVPDKPMMFWSC 711
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
+G +EE S N E + V K+ KA I ++ IGI++PY Q +V
Sbjct: 712 YG-QEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQ---IGIITPYEGQRSYIVQFM 767
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ G+ + + ++V ++D FQG E+D+II++ VRSN+ IGFL++S+R+NVALTRA
Sbjct: 768 QTQGALH-SKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRA 826
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L I+GNA+ L+R +W L+ + C
Sbjct: 827 KFGLIIVGNAKVLSR-HPLWNYLLSMFKEKGCL 858
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 23/120 (19%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 435 LNHSQVHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPS 487
Query: 87 NVAIKELAA-------RVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
N+A+ +LA +VV+L +S R+ L P + L + +L+ G E++
Sbjct: 488 NIAVDQLAEKIHRTGLKVVRLCAKS-----RETLDSP---VAFLALHNQLRALHGAAELH 539
>gi|195127339|ref|XP_002008126.1| GI11996 [Drosophila mojavensis]
gi|193919735|gb|EDW18602.1| GI11996 [Drosophila mojavensis]
Length = 1583
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 50/400 (12%)
Query: 272 LVSEELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDL 331
L +E +E L H + L K I IK L + +++ +L S +L L K
Sbjct: 1194 LSAENIEALKKHQ--QMLEKEIADIKKLP----DQINYIQNQLDSKEKQLRLVMQQLKPQ 1247
Query: 332 LEDLLKSFC----LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQL 387
L + C L+RA++ +T SS L + ++ + +IDEA Q E + +PL+
Sbjct: 1248 LTPREEHECSMMVLQRANIVCTTLSSCVKLANF-IDYFDVCIIDEATQCTEPWTLLPLRF 1306
Query: 388 SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-------------SYLGYSKHL- 433
G++ VL GD QLPA V S+ + E G S+F+R+ ++ ++K
Sbjct: 1307 -GVRGLVLVGDTQQLPATVLSQKAIEFGLGNSMFDRIQRNLKQQLDKPGGNHFVHTKIFK 1365
Query: 434 LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE-- 491
LS QYRMHP I +PNSYFY+N++ ++ K L P + PY IN+ ++
Sbjct: 1366 LSKQYRMHPEICKWPNSYFYDNQLVNAECTHK-------LISP-FIPYCVINLSYTKDTN 1417
Query: 492 EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNS 551
+ S N E V K+LL + K + G++SPYS+ + + + S
Sbjct: 1418 DASSRSISNDEEARFVAKLLLEMDKLM--PVKHFHYGLISPYSSHCYTLSQLIPSH---- 1471
Query: 552 AGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNA 611
+ ++D FQG E D+II+S R+ +GFL+N +R+NVA+TR CL I GN
Sbjct: 1472 --MKITPQTVDAFQGQERDVIILSNARTR---GVGFLTNYQRLNVAITRPTRCLIICGNF 1526
Query: 612 RTLTRKKSVWEALVHDANARQCFFNAD--DDKDLGKAILA 649
L + ++W L+ DA R +F+ + D +DL K++++
Sbjct: 1527 DDL-QSVNIWRHLLDDARKRNVYFDLERGDVEDLQKSLIS 1565
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LND Q ++ D ++ LI GPPGTGK+ +S L + + + + L
Sbjct: 1072 LNDHQMDICQRTWSRLIDDSTPSVTLIQGPPGTGKSAVISNLTLQCMYGSSNISLDRKVL 1131
Query: 82 VCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLD 141
+C +N A+ + A + K R A+ +++ G E K+DS V ++ LD
Sbjct: 1132 ICAHSNAAVDNITAYLKK---------ARSAMSHSHFELIRFGFFE--KMDSTVRDVSLD 1180
Query: 142 -YRVKRLAD 149
+ K+LA+
Sbjct: 1181 AFLHKKLAE 1189
>gi|195492751|ref|XP_002094125.1| GE20371 [Drosophila yakuba]
gi|194180226|gb|EDW93837.1| GE20371 [Drosophila yakuba]
Length = 1699
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 194/377 (51%), Gaps = 48/377 (12%)
Query: 296 IKYLLHKRRSECHFVLRKLQSSFNELNL------PSAVEKDLLEDLLKSFCLKRASLFLS 349
I+ L K ++L++LQ +L L P +++ E + C+ RA++ +
Sbjct: 1336 IQQLKQKANLTSTYLLQQLQQKERQLQLITDQLNPPLTQREEFE--ISQICVARANIICT 1393
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
T SS L + ++ + ++DEA Q E + +P++ G+ H VL GD QLPA+V SK
Sbjct: 1394 TLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDTQQLPAVVLSK 1451
Query: 410 VSNEACFGRSLFERL-------------SYLGYSKHL-LSIQYRMHPSISCFPNSYFYEN 455
+ + S+F+R+ + L ++K LS+QYRMHP I +PN YFYE+
Sbjct: 1452 KAIDFGLSNSMFDRIQRSLQTQLDKPGSNQLMHTKLFKLSMQYRMHPEICRWPNQYFYED 1511
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCRNMVEVSVVMKILLN 513
++ ++ RF P+ PY IN+ ++ S N E V K+L
Sbjct: 1512 QLINAECT------ARFA-SPLI-PYCVINLKYTQDNSGAQNKSISNDEEARFVAKLLTE 1563
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
+ K ++ S G++SPY Q A+ + + S ++N + ++D +QG E+D+II
Sbjct: 1564 MDKHM--PSQQFSYGLISPYQNQCYALSQVIPS-HMN-----LTPQTVDSYQGLEKDVII 1615
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
IS R+ GFL+N +R+NVALTR R CL I GN L + +W L+ DA +R+
Sbjct: 1616 ISNARTR---GCGFLTNYQRLNVALTRPRRCLVICGNFDDL-KSVEMWRNLLDDARSRKV 1671
Query: 634 FFNA--DDDKDLGKAIL 648
+F+ +D DL ++++
Sbjct: 1672 YFDMEREDVDDLQRSLM 1688
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
+N+ Q VL +++ D + ++ LI GPPGTGK+K +S L + L + + L
Sbjct: 1195 MNEHQENIVLRIYQRIIDDLQPSLTLIQGPPGTGKSKVISELCLQTLYGNAAKTLDRKIL 1254
Query: 82 VCTPTNVAIKE---LAARVVKLV 101
+C +N A+ L RV++++
Sbjct: 1255 ICAHSNTAVDHIVGLLGRVLRVM 1277
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 147/267 (55%), Gaps = 21/267 (7%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
F++IDEA Q E S +P S K +L GD QL + +K + F +SLFERL
Sbjct: 300 FVLIDEAVQSTEPLSLVPCVYSPEK-LILVGDHKQLGPTILNKDVVKYGFKQSLFERLLR 358
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G +LLS+QYRMHP + FP+ YFY ++ ++ K + P +F V
Sbjct: 359 IGVMPYLLSVQYRMHPDLCAFPSEYFYNGLLKSGTSTSKV----------LDLPNNFFYV 408
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G+EE + S N E +V I+ L+K + ++ IG+++PY Q I L
Sbjct: 409 CDGKEEISQSRTSFFNKSEAVIVENIIRFLFKNGVLEQQ---IGVITPYEGQRSYI---L 462
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
G + N AG +++ ++DGFQG E+D II+S VRSN +GF+ + +R+NV LTRA+H
Sbjct: 463 GQIFGNEAG-NLEIKNVDGFQGREKDFIIVSLVRSNIFQGVGFVGDKRRMNVTLTRAKHG 521
Query: 605 LWILGNARTLTRKKSVWEALVHDANAR 631
L I+GN TL K +W L++ + R
Sbjct: 522 LIIIGNPFTL-YKNEMWADLLNWYDER 547
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
E F P LN SQ AV + L + T+ LI GPPGTGKT VS ++V L
Sbjct: 155 EVFQPKKFFALNQSQEIAVKAALTR-------TLTLIQGPPGTGKT-MVSAVIVYNLVKH 206
Query: 78 F--RTLVCTPTNVAIKELAARV 97
+ + LV P+N A +LA ++
Sbjct: 207 YGKKVLVVAPSNTAADQLAIKI 228
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 145/263 (55%), Gaps = 14/263 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E+ IP+ + G K VL GD CQL +V K + +A F +SLFERL +
Sbjct: 663 VLVDEATQATEPEAIIPIVM-GAKQVVLVGDHCQLGPVVMCKKAAKANFTQSLFERL-VM 720
Query: 428 GYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
G ++ + L IQYRMHP +S FP+ FYE +++ R+ + P F
Sbjct: 721 GQNRPIRLEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPNNPMFFWS 780
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G+EE S N E S V K++ L K+ + IG+++PY Q I + +
Sbjct: 781 NLGQEELSASGTSYLNRAEASSVEKLVTQLLKSGTKPDQ---IGVITPYEGQRAFILQTM 837
Query: 545 GSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ V + ++V S+D FQG E+D II+S VRS IGFL++ +R+NVALTRAR
Sbjct: 838 TANGVLRSQLYQQIEVASVDAFQGREKDYIILSCVRS---AGIGFLNDPRRLNVALTRAR 894
Query: 603 HCLWILGNARTLTRKKSVWEALV 625
+ L ++GNA L R +W ++
Sbjct: 895 YGLVVIGNAHRLARDP-LWNEVI 916
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN+SQ A+ LR+ LI GPPGTGKT T S LV L + LVC P+N
Sbjct: 503 LNESQMSAITRVLRE-------PFSLIQGPPGTGKTVT-SATLVYHLSKFGQVLVCAPSN 554
Query: 88 VAIKELAAR-------VVKLVKESVE 106
+A+ +L R VV+L +S E
Sbjct: 555 IAVDQLTERIHRTGLKVVRLAAKSRE 580
>gi|294893946|ref|XP_002774696.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880149|gb|EER06512.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 375
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 141/278 (50%), Gaps = 23/278 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDE Q E + +PL G K VL GD QL A + S +++ G+SLFER+
Sbjct: 89 VVIDECTQATEPATLVPLA-RGAKRCVLLGDHKQLSATICSTAASDRGLGKSLFERVLES 147
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV- 486
G HLL +Q RMHPSI+ F N FYE ++ R + + G +Y P S + V
Sbjct: 148 GGRLHLLDVQRRMHPSIAEFSNINFYEGRLHSEVGERAK------IPG-LYWPASGVQVC 200
Query: 487 ------FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
G E + S N E V+ ++ +A ++ + IGIV PYS Q I
Sbjct: 201 LVNIDALSGGETRVGTSFSNRAEAKAVIDAMVVAVEAGMEPGD---IGIVVPYSGQKTQI 257
Query: 541 QEKLGSKYV---NSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
+ L S Y S G + + ++D FQG E +LI+ S VRSN G IGF + KR+NV
Sbjct: 258 ERMLESDYRLPRESVG-RISINTVDAFQGSERELILFSAVRSNRDGDIGFTGDPKRMNVM 316
Query: 598 LTRARHCLWILGNARTLTR-KKSVWEALVHDANARQCF 634
LTRA+ L + G+ +TL+ + W VH A + C
Sbjct: 317 LTRAKRGLVVFGDVKTLSADTEGDWARWVHWAKSTGCM 354
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 21/330 (6%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
++IDE+ Q E E IP+ + G KH V+ GD QL +V K ++ A +SLFERL
Sbjct: 595 MVLIDESTQATEPECLIPIVM-GAKHVVMVGDHRQLGPVVTCKQAHAAGLAQSLFERLIA 653
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG L +QYRMHP +S FP++ FYE + + + R+ P+
Sbjct: 654 LGIKPIRLGVQYRMHPCLSDFPSNKFYEGVLSNGVSASDRTLSHVDFPWPVPSKPMMFWS 713
Query: 487 FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G+EE N E V K + +L + + ++ IG+V+PY Q + + +
Sbjct: 714 QTGQEEMSASGTSFLNRAEAVAVEKCVTHLLNSGVSPED---IGVVTPYEGQRAYVVQHM 770
Query: 545 GSKYVNSAGF--AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
V ++V S+D FQG E+D II++ VRSN IGFLS+ +R+NVA+TRAR
Sbjct: 771 TRVGVLHPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSDPRRLNVAITRAR 830
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELL- 661
L I+GN + L ++ + L H ++C A+ ++K+ + L E +
Sbjct: 831 SGLIIIGNPKVLNKQLLFHDMLTH-FRQKKCLVEG--------ALGSLKQCMVALPEPVI 881
Query: 662 ---NPESRLFRSQRWKVNFSENFLKSFRKL 688
+P R+ + KV+ + F+ F +L
Sbjct: 882 SAKDPWRRMNAQRGAKVSAEQRFVNEFPEL 911
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM-KFRTLVCTPT 86
LNDSQ AV L + + L+ GPPGTGKT T + ++ L + + +VC P+
Sbjct: 432 LNDSQFNAVKEVLER-------PLSLVQGPPGTGKTVTSATIVYHLAKRGNGQVIVCAPS 484
Query: 87 NVAIKELAARVVK 99
NVA+ LA ++ K
Sbjct: 485 NVAVDHLAEKIEK 497
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 158/298 (53%), Gaps = 16/298 (5%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY 426
+++IDEA Q E S IPL G + +L GD QL ++ K + +A +LFERL
Sbjct: 247 YVLIDEAVQCTEPLSIIPLAY-GCRKLILVGDHKQLGPIILDKKAAKAGLKETLFERLIK 305
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
LG LL++QYRMHP ++ +P++ FYE +++ + KR + L P +F V
Sbjct: 306 LGNLPFLLNMQYRMHPKLAEWPSNTFYEGSLKNGISESKR-LNRTVLPFP-----TFFYV 359
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G EE S N E V +I+ +L K+ I K+ IG+++PY Q V I +L
Sbjct: 360 CYGLEELSASGTSYLNQTEALVTEEIIKSLVKSGISEKQ---IGVITPYEGQRVFILNRL 416
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
+ +K ++D +QG E+D IIIS VRSN IGFL++ +R+NV LTRA++
Sbjct: 417 TKTSLKLENLEIK--NVDAYQGREKDYIIISLVRSNQKQGIGFLNDERRLNVTLTRAKYG 474
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLN 662
I+GN TL + K +W ++ R + + L KAI+ K + +L L +
Sbjct: 475 CCIIGNPNTLYKNK-MWANFINFYQDRDMIYKGSVE-CLEKAIVVKKSPMVDLRALFD 530
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L + LI GPPGTGKT T + ++ L+ Q K + LV + +
Sbjct: 57 LNSSQQIAVKAALHNQ-------LTLIQGPPGTGKTVTCAAVVYNLVKQFKGKVLVVSNS 109
Query: 87 NVAIKELAA-------RVVKLVKESVERDCRDALFF 115
N AI LA +V+++V + E +C D L F
Sbjct: 110 NTAIDHLAVKIHHSALKVIRIVSKRRE-NCSDELEF 144
>gi|209880584|ref|XP_002141731.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557337|gb|EEA07382.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 1011
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 166/334 (49%), Gaps = 34/334 (10%)
Query: 338 SFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFG 397
S C + + + SSS S + + ++IDEA+Q E + IPL+L G K +L G
Sbjct: 539 SVCGSKELVSILDQSSSPNEKSKKIIAFDTVIIDEASQGVELSTLIPLKL-GCKRLILVG 597
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
D QLPA V S+++ + SLF+RL G +LS+QYRMHP IS FP+ FY ++
Sbjct: 598 DPKQLPATVLSRIAILHKYDISLFQRLQLNGLPVKMLSMQYRMHPVISEFPSKRFYNGEL 657
Query: 458 RD-SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYK 516
+D + R + P + P +F++V EE S N +E +V +++ L
Sbjct: 658 QDYPGIIDARKSIIPWDSIPFFKPLTFLSV--NSEEIKNKSISNPIEAELVCQLVELLGL 715
Query: 517 AWIDSKEKLS-----------IGIVSPYSAQVVAIQEKLGSKYVNSAGF--AVKVMSIDG 563
+ EKL I I+SPY+ QV I+ + ++ + + V +IDG
Sbjct: 716 ILTEVNEKLPSKSDVNNWYDKIAIISPYNEQVRLIKSMIKKRFNLPSNIICPIDVCTIDG 775
Query: 564 FQGGEEDLIIISTVRSN----NG------------GSIGFLSNSKRVNVALTRARHCLWI 607
FQG E D II S VR+ NG + GFL++ +R+NVALTRA+ LWI
Sbjct: 776 FQGQERDYIIFSAVRAQYIEPNGIIGNNNRLETLRTNAGFLADIRRINVALTRAKRNLWI 835
Query: 608 LGNARTLTRKKSVWEALVHDANARQCFFNADDDK 641
+G+ R L W L + + C F+ D +K
Sbjct: 836 IGHGRYLLGNPE-WAHLWNYTAEKNCQFSIDINK 868
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 18 ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK 77
+T SL NDSQ A+ CL+ I LI GPPGTGKT T+ ++ LL
Sbjct: 295 DTLLDSLEKIYNDSQLSALNECLKYQ------GITLIQGPPGTGKTTTIIGIISALLSSN 348
Query: 78 FRTLVC 83
+ C
Sbjct: 349 YERSSC 354
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 158/294 (53%), Gaps = 34/294 (11%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL ++ K + +A +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKR----------FLHG-- 475
G L +QYRMHP++S FP++ FYE +++ T K KR F+ G
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKRKEVINLSHMCFISGER 715
Query: 476 PMYG----------PYSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKE 523
+ G P F + + G+EE S N E + V K+ KA + ++
Sbjct: 716 QLIGIDWQWPVPDKPMMFWSCY-GQEELSSSGTSFLNRTEAANVEKLATRFLKAGLKPEQ 774
Query: 524 KLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN 580
IGI++PY Q +V + G+ + + ++V ++D FQG E+D+II++ VRSN
Sbjct: 775 ---IGIITPYEGQRSYIVQFMQTQGALH-SKLYLEMEVANVDAFQGREKDIIIVTCVRSN 830
Query: 581 NGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ IGFL++S+R+NVALTRA+ L I+GNA+ L+R +W L+ + C
Sbjct: 831 DHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSR-HPLWNYLLSMFKEKGCL 883
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 435 LNHSQVHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPS 487
Query: 87 NVAIKELAARVVKLVKESVERDC---RDALFFPLGDILLLGNNERLKVDSGVEEIY---- 139
N+A+ +LA ++ + V R C R+ L P + L + +L+ G E++
Sbjct: 488 NIAVDQLAEKIHR-TGLKVVRLCAKSRETLDSP---VAFLALHNQLRALHGAAELHKLQQ 543
Query: 140 LDYRVKRLAD 149
L + LAD
Sbjct: 544 LKEEMGELAD 553
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 141/254 (55%), Gaps = 10/254 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E+ IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 561 VLVDEATQAAEPEAMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 619
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ +
Sbjct: 620 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 679
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G EE N E + V K++ +K+ + + IG+++PY Q +V+ +
Sbjct: 680 TGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQ---IGVITPYEGQRSFIVSYMQ 736
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA+
Sbjct: 737 LHGA-LKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAK 795
Query: 603 HCLWILGNARTLTR 616
+ + ILGN + L++
Sbjct: 796 YGVVILGNPKVLSK 809
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 399 LNHSQMAAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPS 451
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ LA +VV+L +S E
Sbjct: 452 NVAVDHLAEKIHMTGLKVVRLTAKSRE 478
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 141/254 (55%), Gaps = 10/254 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E+ IPL + G K AVL GD QL ++ +K + A +SLFERL L
Sbjct: 574 VLVDEATQAAEPEAMIPLVM-GCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 632
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ +
Sbjct: 633 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 692
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G EE N E + V K++ +K+ + + IG+++PY Q +V+ +
Sbjct: 693 TGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQ---IGVITPYEGQRSFIVSYMQ 749
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
G+ V+V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA+
Sbjct: 750 LHGA-LKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAK 808
Query: 603 HCLWILGNARTLTR 616
+ + ILGN + L++
Sbjct: 809 YGVVILGNPKVLSK 822
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 412 LNHSQMAAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPS 464
Query: 87 NVAIKELAA-------RVVKLVKESVE 106
NVA+ LA +VV+L +S E
Sbjct: 465 NVAVDHLAEKIHMTGLKVVRLTAKSRE 491
>gi|195376277|ref|XP_002046923.1| GJ12221 [Drosophila virilis]
gi|194154081|gb|EDW69265.1| GJ12221 [Drosophila virilis]
Length = 1858
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 176/328 (53%), Gaps = 40/328 (12%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
CL+RA++ +T SS L + ++ + +IDEA Q E + +PL+ G++ VL GD
Sbjct: 1535 CLQRANIVCTTLSSCVKLAAF-IDYFDACIIDEATQCTEPWTLLPLRF-GVRGLVLVGDT 1592
Query: 400 CQLPAMVESKVSNEACFGRSLFERL-------------SYLGYSKHL-LSIQYRMHPSIS 445
QLPA V S+ + + G S+F+R+ ++ ++K LS+QYRMHP I
Sbjct: 1593 QQLPATVLSQKAIDFGLGNSMFDRIQRNLKQQLEQPRGNHFVHTKVFKLSMQYRMHPEIC 1652
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVE 503
+PNSYFY+N++ ++S + L P+ PY IN+ R+ + S N E
Sbjct: 1653 RWPNSYFYDNQLVNASCTER-------LISPLI-PYCVINLSYTRDTNDASSRSISNDEE 1704
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDG 563
V K+L+ + K + ++ S G+++PYS + + V A + ++D
Sbjct: 1705 ARFVAKLLIEMDK--LMPAKRFSYGLITPYSNHCYTLSQ------VIPAHMKITPQTVDA 1756
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
+QG E D++I+S R+ +GFL+N +R+NVA+TR + CL I GN L K +W
Sbjct: 1757 YQGQERDVVILSNARTR---GVGFLTNYQRLNVAITRPQRCLVICGNFDDLQSVK-IWRH 1812
Query: 624 LVHDANARQCFFNAD--DDKDLGKAILA 649
L+ DA R +F+ + D ++L +++++
Sbjct: 1813 LLDDARKRGVYFDLERSDVENLPRSLIS 1840
>gi|224010575|ref|XP_002294245.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
gi|220970262|gb|EED88600.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
Length = 608
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 149/311 (47%), Gaps = 8/311 (2%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
L++ L + L+T S+ A +VIDEAAQ E + + LQL G HA+L
Sbjct: 244 LETHVLNSNHIILTTLGSAGGRSIEAASKFKVIVIDEAAQSAEPSTLVALQL-GSSHAIL 302
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA + S + RSLF+RL + +L+ QYRMHP IS FP FYE
Sbjct: 303 VGDPQQLPATIFSVSGRSTKYDRSLFQRLEECRHPVMMLNTQYRMHPIISEFPRHIFYEG 362
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG-----GREEFIEHSCRNMVEVSVVMKI 510
+ D V+K + L + G + I F +EE S N E + + +
Sbjct: 363 MLLDGPNVQKPDFGGT-LKTAIVGKFPHIKPFNIFDLDSKEERDGTSLSNTNEAQLALHL 421
Query: 511 LLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEED 570
L + K + +++PYS Q + ++ N+ V++ ++D FQG E
Sbjct: 422 YCALDRETNGLLAKSRVAVITPYSQQTALLHRLFEEQFGNAYSSRVEISTVDAFQGREAG 481
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANA 630
L+I S VR+ IGFLS+ +R+NVALTRA++ L+++ R++ W LV A
Sbjct: 482 LVIYSCVRAAGSKGIGFLSDVQRMNVALTRAKYFLFVIARCRSIM-VNPYWRNLVGYARE 540
Query: 631 RQCFFNADDDK 641
+ D+
Sbjct: 541 KSAIIAVPMDR 551
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 137/268 (51%), Gaps = 19/268 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 585 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 643
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 644 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 703
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 704 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 760
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 761 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 819
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANA 630
+ S+W A D A
Sbjct: 820 P---------AHPQPGSIWSAAGPDCRA 838
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 423 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 475
Query: 87 NVAIKELAARV 97
N+A+ +L ++
Sbjct: 476 NIAVDQLTEKI 486
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 26/278 (9%)
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG 428
+IDEA Q E + IPL+ G++ ++ GD+ QLP+ V S S + +SLFERL G
Sbjct: 494 IIDEAVQCVEVSALIPLKY-GVERCIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLECG 552
Query: 429 YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRK-RSYEKRFLHGPMYGPYSFINVF 487
+ LL+ QYRM I FP++ FYE ++ D + K S L F+NV
Sbjct: 553 LNVTLLTQQYRMESKIREFPSNEFYEGRLADGVKIEKINSVSNSVL---------FLNVC 603
Query: 488 GGREEF-IEHSCRNMVEVSVVMKILLNLYKA-----WIDSKEKLSIGIVSPYSAQVVAIQ 541
G + E S N EV V+ +L + K W IGI++PY QV+ ++
Sbjct: 604 GKEDRLGKESSLFNTEEVKAVVFLLTEISKNVECVHW-------DIGIITPYRKQVLDVK 656
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ + V + V V ++DGFQG E D++I+S VRS+ IGF+ + +R+NVA+TRA
Sbjct: 657 KAIEQNEV-AKSLNVLVNTVDGFQGREFDIVIMSCVRSSEHNGIGFVEDERRLNVAITRA 715
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+ L ++GN +TL R+ VWE ++ + DD
Sbjct: 716 KRALCVVGNIKTL-RQVKVWEDYINWLTKNRLILEFDD 752
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------------- 74
NDSQ A+ L K+ LI GPPGTGKT T+ ++ ++L
Sbjct: 278 FNDSQIHAMFRSL------AKSGFSLIQGPPGTGKTMTLCGIIGVILYGNSSSVFSKSSE 331
Query: 75 QMKFRTLVCTPTNVAIKELAARVVKL 100
R L+C+P+N AI + +++K+
Sbjct: 332 SHHERVLICSPSNAAIDGIIMKLLKM 357
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 9/270 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DE+ Q +E E IP+ ++G +L GD QL +++ + + A F SLFERL L
Sbjct: 582 VLVDESTQAREPECLIPI-VNGCDRLILVGDHKQLGPVIQDQEAKRAEFDISLFERLLSL 640
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G + L+IQYRMHP++S FP++ FY ++++ +R+ F P F V
Sbjct: 641 GIKPYCLNIQYRMHPALSIFPSNMFYNGALKNAVHSSERTRNLAFPWPRSDMPMMFWCVQ 700
Query: 488 GGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + S N +E + V K++ I IG+++PY +Q +++ L S
Sbjct: 701 GSEDPGSSGRSFLNRMEATCVEKVVERFINCGIPGDR---IGVITPYDSQRTLLRQVL-S 756
Query: 547 KYVNSAGFA--VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
+++ A V++ S+D FQG E D II S VRSN+ G +GFL++ +R+NVA+TRA++
Sbjct: 757 RHMEKAEEVKKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRLNVAITRAKYG 816
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCF 634
+ I+GN TL R +W L++ +C
Sbjct: 817 IVIIGNPNTL-RSHPIWVELMNHFQMNKCL 845
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTK-TVSMLLVILLQMKFRTLVCTPT 86
LN Q AV + L + + LI GPPGTGKT + +++ I+ K R LVC P+
Sbjct: 419 LNGFQLDAVKNALNKH-------LTLIQGPPGTGKTVVSATIIYHIVKSYKQRVLVCAPS 471
Query: 87 NVAIKELAAR-------VVKLV---KESVERDCRDALFFPLGDILLLGNNERLKVDSGVE 136
N+A+ L R VV+LV +ESV + + L + +E K+++ ++
Sbjct: 472 NIAVDNLTLRLHRLGLCVVRLVARSRESVRSEVENVCLHNLAVYVGGPTSELYKLNAKLQ 531
Query: 137 E 137
E
Sbjct: 532 E 532
>gi|296089913|emb|CBI39732.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 129/242 (53%), Gaps = 6/242 (2%)
Query: 397 GDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENK 456
GD QLPA V S ++ + +G SLF+R GY +L QYRMHP I FP+ FY+
Sbjct: 19 GDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEFYDEA 78
Query: 457 IRDSSTVRKRSYEKRFLHG-PMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLN 513
+ D V+ ++ R H +GP+ F ++ G+E S N+ EV V+ +
Sbjct: 79 LEDGPDVKDQTV--RLWHDYRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLLMYHK 136
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
L + + K + I+SPY QV +E+ + + V + ++DGFQG E+D+ I
Sbjct: 137 LVTRYPELKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDINTVDGFQGREKDVAI 196
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
S VR++ IGF+++ +R+NV +TRAR + ++G+A TL +K W L+ A R C
Sbjct: 197 FSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGSASTL-KKDEHWNNLLESAEKRNC 255
Query: 634 FF 635
Sbjct: 256 LL 257
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 146/279 (52%), Gaps = 26/279 (9%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E E IPL L G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 590 VLIDEATQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 648
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 649 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 708
Query: 488 GGREEFIEHSCRNMV--EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE I S + + S V KI+ +K+ + + IG+++PY Q I
Sbjct: 709 LGQEE-ISSSGTSFLNRRASNVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYI----- 759
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 760 ---VNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 816
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
VALTRA++ + ILGN + L+ K +W L+ + C
Sbjct: 817 VALTRAKYGVVILGNPKVLS-KHPLWHYLLTHYKEKNCL 854
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M + LVC P+
Sbjct: 428 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPS 480
Query: 87 NVAIKELAARV----VKLVKESVERDCRDAL 113
NVA+ +L ++ +K+V+ S + R+AL
Sbjct: 481 NVAVDQLTEKIHATGLKVVRLSAK--SREAL 509
>gi|319789787|ref|YP_004151420.1| DNA helicase [Thermovibrio ammonificans HB-1]
gi|317114289|gb|ADU96779.1| DNA helicase [Thermovibrio ammonificans HB-1]
Length = 720
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 29/280 (10%)
Query: 352 SSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
S++ M+ S +E +F VIDE +Q E + IP+ + + GD QLP V S+
Sbjct: 433 STNSMVKSELLEGFHFDSAVIDEGSQQVEPSTLIPIARAN--RFFIAGDHKQLPPTVASE 490
Query: 410 VSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY 468
+ E R+LFERL S G +L +QYRM+ I FPN FYE K+ + V++R+
Sbjct: 491 EAKE--LERTLFERLISTHGELSSMLRVQYRMNEKIMEFPNREFYEGKLVAAPEVKERTL 548
Query: 469 EKRFLHGPMY--------GPYSFI-----NVFGGREEFIEHSCRNMVEVSVVMKILLNLY 515
L P P FI N + + E S N E + +++ L L+
Sbjct: 549 ADFNLEAPRKFKKVLDPSVPLGFIDTSSINAYEFQPEG-STSYENYEEAKIAVEVALELH 607
Query: 516 KAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIS 575
+ +D +E IGI++PY+AQV I++ L + F V+V S+DGFQG E++ II+S
Sbjct: 608 RMGLDRRE---IGIITPYAAQVKLIKQLLAERE-----FKVEVNSVDGFQGREKEAIIVS 659
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
VRSN+ G IGFL + +R+NVA+TR R L +GN +TL+
Sbjct: 660 FVRSNDEGEIGFLKDLRRLNVAITRPRRKLVAIGNTKTLS 699
>gi|406606341|emb|CCH42332.1| Regulator of nonsense transcripts 1 [Wickerhamomyces ciferrii]
Length = 1077
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 172/338 (50%), Gaps = 63/338 (18%)
Query: 344 ASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLP 403
A + L+T ++ H ++ + L++DE+ Q E+ + +PL L G++ +L GDE QL
Sbjct: 748 AKVILTTTITAGGPHLRHLDKIPILIMDESTQSNEASTLVPLSLKGLEKILLVGDEKQL- 806
Query: 404 AMVESKVSNEACFGRSLFERLSYLG--YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSS 461
S ++ +SLFER+ G ++ ++L IQYRM+P IS FPN FYENK+ D
Sbjct: 807 ----SSFNDIPYLEQSLFERVLKNGTYFNPNMLQIQYRMNPKISKFPNIKFYENKLIDGV 862
Query: 462 TVRKRSYEKRFLHGPM----YG-----------PYSFINVFGGREEFIEHSCRNMVEVSV 506
T + R+ F P+ YG P F+ G + +N+ E ++
Sbjct: 863 TEQDRT---TFGIPPLLFIDYGDHYKETQSLKNPIKFLINSGNISSY-----QNIGEANL 914
Query: 507 VMKILLNL-YKAWIDSKEKLSIGIVSPYSAQ--VVA---------------IQEKLGSKY 548
++K++ L +K I+ K+ IGI++PYS+Q ++A IQE++ +
Sbjct: 915 ILKLIYELNHKGGINLKD---IGIITPYSSQRDIIAQLIRNDRKINPNFEKIQEEIDDDF 971
Query: 549 VNSAGFAVK------------VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
+S K + SID FQG E++ II S VRSN IGF+ + +R+NV
Sbjct: 972 NHSNNSQFKKPSSIKTICGLMISSIDAFQGREKNHIIFSCVRSNEFNKIGFVKDLRRLNV 1031
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
ALTRA++ L I+GN + + SVW L++ C
Sbjct: 1032 ALTRAKNSLTIVGNKSCMKQGDSVWNDLINHLETNHCI 1069
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 17 NETFGP---SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL 73
N+T P ++ LN+ Q A+ L D+ TI + GPPGTGKT T++ L++ L
Sbjct: 592 NKTLRPLKYPTTTKLNNPQLIAINQVL-----DNPITI--LQGPPGTGKTSTINELILQL 644
Query: 74 LQMKFRTLVCTPTNVAIKELAARVVK 99
++ + LV +NVAI +A +++K
Sbjct: 645 VKDTYPILVVAASNVAIDNIAEKLMK 670
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 32/329 (9%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+++ + A + + T S+SY H ++ + L++DE+ Q E ++ + G H VL
Sbjct: 987 IENIIISSAKVVICTCSTSYDNH-LSRVHFSSLIVDESTQAIEPDTLCAIG-HGCSHIVL 1044
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QL +V + ++ + SL+ERL G H L++QYRMHP++S FP++ FY
Sbjct: 1045 MGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSNTFYNG 1104
Query: 456 KIRDSSTVRKRSYEKRFLHG-----PMYG-PYSFINVFGGREEFIEHSCRNMVEVSVVMK 509
+++ T R + L PM P F +V G E S RN E+ V
Sbjct: 1105 MLQNGVTQADRQLVPKPLSTESFPWPMPSTPSFFWHVQGTHEIGHGTSLRNDTEILCVEA 1164
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA-VKVMSIDGFQGGE 568
I+ L K + ++ IGIV+PY Q I+ +L AG++ V V S+D FQG E
Sbjct: 1165 IVDQLLKCY--ELKQGDIGIVTPYDYQKCQIEMQL-----KDAGYSEVFVNSVDAFQGHE 1217
Query: 569 EDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
+++II STVRS + IGFL + +R+NV LTR R L I+GNA L + W +L+
Sbjct: 1218 KEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDDT-WRSLI--- 1272
Query: 629 NARQCFFNADDDKDLGKAILAVKKELDEL 657
Q ++N +L V ++LD+L
Sbjct: 1273 ---QHYYN--------NKVLVVGRDLDQL 1290
>gi|145353676|ref|XP_001421132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357229|ref|XP_001422823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581368|gb|ABO99425.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583067|gb|ABP01182.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 553
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 153/301 (50%), Gaps = 13/301 (4%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
L RASL T +S+ ++E + LV+DEAAQ E E IP L + A+L GD
Sbjct: 256 LNRASLVFCTLASAGQSIMSSLEQPDALVVDEAAQALEPEIAIPF-LRYPRKALLVGDPA 314
Query: 401 QLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLPA + S+++ SL ERL S LL QYRMHPSI+ +P + FY ++ +
Sbjct: 315 QLPATLISEIARRHGHATSLMERLMSANAERASLLDTQYRMHPSIASWPAAQFYGGRLAN 374
Query: 460 SSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWI 519
+ V R+ + Y+F++V + S N E V ++ +A
Sbjct: 375 ADHVLTRNLPQGL--SSSVPSYAFVDVASVESGGVGKSKWNQREADVACALI----RALK 428
Query: 520 DSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRS 579
L + ++ YSAQV AI L V V V S+D FQG E D+++ S VRS
Sbjct: 429 TKSPTLFVVCITFYSAQVRAIARALQRAGVRD----VAVHSVDSFQGSEADVVVCSAVRS 484
Query: 580 NNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTR-KKSVWEALVHDANARQCFFNAD 638
N ++GFLS+ +R+NVALTRA++ +LG+ TL+R +LV DA AR +
Sbjct: 485 NAKANVGFLSDKRRLNVALTRAKYSSIVLGSRDTLSRCGVDALRSLVEDAAARDVIVSEH 544
Query: 639 D 639
D
Sbjct: 545 D 545
Score = 49.3 bits (116), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 47 HKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTNVAIKELAARVVKLVKESVE 106
H +Q++ GPPG GKT + LL +L K R LVC P+N + V +V E
Sbjct: 81 HFDQLQMVQGPPGCGKTHFIVSLLAVLAAKKQRVLVCAPSN--------KAVCVVMELYL 132
Query: 107 RDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDY 142
R C + +L G + L+ S V+ +DY
Sbjct: 133 RTCGE----DAAPCVLTGAEDTLREASSVDGGAMDY 164
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 140/258 (54%), Gaps = 14/258 (5%)
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG 428
V+DEA Q E + I L+ AVL GD QLP V S+ + +A S+FER+ LG
Sbjct: 187 VVDEATQCTEPGALI--SLTKALSAVLVGDSKQLPPTVVSRDAVDAGLQVSIFERMERLG 244
Query: 429 YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG 488
LL +QYRMHP I+ FP+ FY+ K+ T + R P +F+ +
Sbjct: 245 VKVSLLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDRPLVPGIAWPSPNVPVAFVEISA 304
Query: 489 GREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG-- 545
+ +S N+ E + + ++ L A D IG++SPY+AQV +QE+ G
Sbjct: 305 PESRAPDGNSLYNVGEAKMAIGVVRKLLAAG-DLAGPGDIGVISPYAAQVRRLQEEYGVG 363
Query: 546 -SKYVNSAGFA-------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
S N + +++ S+DGFQG E+++I++ TVRSN G IGF+++ +R+NV
Sbjct: 364 GSPKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRSNPSGDIGFVADPRRLNVG 423
Query: 598 LTRARHCLWILGNARTLT 615
+TRA+ L +LGN +TL+
Sbjct: 424 ITRAKRGLIVLGNRKTLS 441
>gi|330040413|ref|XP_003239900.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
gi|327206826|gb|AEA39002.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
Length = 680
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 144/271 (53%), Gaps = 13/271 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
LV+DEAAQ E + + ++ + K V+ GD QLPA V SK S + SLF+RL
Sbjct: 368 LVLDEAAQAIEINNLMCVK-NISKKLVMVGDVQQLPAFVFSKHSAFFGYDVSLFKRLQLQ 426
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
Y+ L IQYRMHP IS FP FY+N I+DS V S FL + P++F +V
Sbjct: 427 KYAICFLEIQYRMHPQISSFPARKFYKNGIKDS--VLSDSENLYFLR--CFSPFNFFDVS 482
Query: 488 GGREEFI---EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
E E S N+ E+ V+ + + L K S GI+S Y QV IQ
Sbjct: 483 DSLENAHLKNEFSWCNLDEIRVI-NLFIQLLKYTHQKFNAQSFGIISGYEGQVDEIQNYF 541
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
++ ++ K +ID FQG E+D II S VRS IGFLS+ +R+NVA TRA+
Sbjct: 542 CNEKISKEK---KTNTIDSFQGKEKDFIIFSCVRSRFKSGIGFLSDCRRINVAFTRAKKY 598
Query: 605 LWILGNARTLTRKKSVWEALVHDANARQCFF 635
W +GN+ +L+ K W+ ++ D+ R FF
Sbjct: 599 FWCIGNSTSLS-KNPTWKEILSDSKRRLKFF 628
>gi|403223698|dbj|BAM41828.1| tRNA-splicing endonuclease [Theileria orientalis strain Shintoku]
Length = 798
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 165/327 (50%), Gaps = 37/327 (11%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
L+IDEA Q E + IP L G K A+L GD CQL A V SKV+ + + +SLF+RL
Sbjct: 462 LIIDEATQAVELSTLIPFNL-GCKRAILVGDPCQLSATVCSKVAIQLNYDQSLFKRLQLC 520
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
GY + L +QYRM P I+ FP+ YFY+N++ ++ + E+ + P++ P F +
Sbjct: 521 GYPVNFLKLQYRMDPLITRFPSMYFYQNQLINAKKSLSKP-EEDWRQFPLFRPTVFFAI- 578
Query: 488 GGREEFIEHSCRNMVEVSVVMKILLNLYK-----AWIDSKE-KLSIGIVSPYSAQVVAIQ 541
E + S N +EV +V ++L L + I ++E I ++SPY+AQ ++
Sbjct: 579 DSHESRNDTSYVNEMEVDLVCQLLEMLIEIMSTIPGITAEEIARKIAVISPYAAQAEILK 638
Query: 542 EKLG--------------SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN------N 581
+ SK S + V ++DGFQG E+D+II S VR+N N
Sbjct: 639 STISQRIKINPQTNVPDYSKITPSKTNQIYVSTVDGFQGMEKDIIIFSAVRTNYVDLTAN 698
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV-HDANARQCFFNADDD 640
F+++ +R+NVA+TRA L I+GN R L K W AL H A F +
Sbjct: 699 VIDASFIADRRRINVAITRACSNLLIVGNPRYLLDHKH-WSALYNHYAKTGSIFICKTVN 757
Query: 641 KDLGKAILA------VKKELDELDELL 661
L L +KK+ D ++E L
Sbjct: 758 NKLDPNYLKNWSKEYLKKDPDRVNEFL 784
Score = 47.8 bits (112), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILL----QMKFRTLVCTPTNVAIKELAARVV 98
I LI GPPGTGKT T+ M +VI L R L+C P+N AI E+ R+V
Sbjct: 316 ISLIQGPPGTGKTTTI-MGIVIHLGSENHSNRRILICAPSNAAIDEIVKRLV 366
>gi|224009021|ref|XP_002293469.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
gi|220970869|gb|EED89205.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 153/296 (51%), Gaps = 24/296 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC-FGRSLFERLSY 426
+++DEA Q E ES IP + + L GD QLP + S S + C F RSLFERL
Sbjct: 44 VILDEACQASEPESLIPFKFNPTT-VTLVGDPQQLPVLTISGPSTQNCLFERSLFERLQS 102
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
L + LL QYRMH I+ FP+ FY+ K+ +V+ RS + P + +F +
Sbjct: 103 LNWPVTLLREQYRMHQRIAEFPSKEFYQGKLITPDSVKNRSVS--WTSNPCFPTIAFWDT 160
Query: 487 FGG--REEFIEHSCRNMVEVSVVMKILLNL--YKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
G N EV + + +L+L Y+ ++ K+SIGI+S Y QV I
Sbjct: 161 DGKLMSGSGGGFGYSNQEEVEFITRDILSLFTYEYLRNTDVKVSIGIISFYKEQVSIILL 220
Query: 543 KLGSKY--------VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-------GGSIGF 587
Y ++ + ++KV ++DGFQG E D+II+S VRS++ ++GF
Sbjct: 221 LFAGIYWTLASVTALDQSRISIKVATVDGFQGSECDIIILSCVRSHSNRGGGNGRNNVGF 280
Query: 588 LSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDL 643
L++ +RVNVALTRA+ LWI+GN+ L + ++W L+ + + D + +
Sbjct: 281 LNDYRRVNVALTRAKCSLWIVGNSEVL-KSSNLWSKLIQHMEGEKALQRSSDFRSM 335
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 10/241 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G K +L GD CQL +V K + +A +SLFERL L
Sbjct: 668 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 726
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 727 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 786
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E + V KI L KA + IGI++PY Q +V +
Sbjct: 787 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 843
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 844 FSGSLHTKLYQ-EVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 902
Query: 603 H 603
+
Sbjct: 903 Y 903
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 506 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPS 558
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
N+A+ +L +VV+L +S E
Sbjct: 559 NIAVDQLTEKIHQTGLKVVRLCAKSRE 585
>gi|253741410|gb|EES98280.1| Regulator of nonsense transcripts 1-like protein [Giardia
intestinalis ATCC 50581]
Length = 1309
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 202/416 (48%), Gaps = 43/416 (10%)
Query: 250 FHVMATLISLLDSFETLLFEDNLVSEELEELLSHSVDEGLSKSIVGI-KYLLHKRRSECH 308
F + L L D+ ++ D S+E + + DE K + YL K++
Sbjct: 916 FEEILKLTLLNDNPQSPYLSDFTPSKEARLIYENMTDEIPDKQSNDVYNYLQMKKKDNID 975
Query: 309 FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFL 368
L+ QS+ E + K + E +++ + A + + T S+SY H ++ + L
Sbjct: 976 VALK--QSAEEE------ISKAMFE--IENLIISSAQVVICTCSTSYDNH-LSRVHFSSL 1024
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG 428
++DE+ Q E ++ + G H VL GD QL +V + ++ + SL+ERL G
Sbjct: 1025 IVDESTQAIEPDTICAIG-HGCSHIVLMGDHKQLGPIVATNIARLSKLDLSLYERLQQAG 1083
Query: 429 YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG------PYS 482
H L++QYRMHP++S FP++ FY +++ T R + + + P
Sbjct: 1084 IEPHSLTVQYRMHPALSAFPSNTFYNGMLQNGVTQMDRQLIPKAMSTESFPWPVPSIPSF 1143
Query: 483 FINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
F +V G E S RN E+ V I+ +L K + ++ IGIV+PY Q I+
Sbjct: 1144 FWHVQGTHEVGHGTSLRNDTEILCVEAIVDHLLKCY--ELKQGDIGIVTPYDYQKCQIEM 1201
Query: 543 KLGSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+L AG++ V V S+D FQG E+++II STVRS + IGFL + +R+NV LTR
Sbjct: 1202 QL-----KDAGYSEVFVNSVDAFQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRC 1255
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDEL 657
R L I+GNA L + W AL+ Q ++N +L ++LD+L
Sbjct: 1256 RCALIIVGNATALAIDDT-WRALI------QHYYNT--------KVLVAGRDLDQL 1296
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 18/313 (5%)
Query: 324 PSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTI 383
P + + E +++ +A S S L ++ + +++DEA+Q+ E S +
Sbjct: 633 PGCTKHEAYEAQIRAVRYAQAVCCTCAGSGSDFLDRIS---FSAVMLDEASQVTEPMSLV 689
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPS 443
P+ G + VL GD QLP + S+ + S+F+RL LG ++L Q+RMHP+
Sbjct: 690 PIS-RGCQQLVLVGDHKQLPPTILSREAELGGLTLSMFDRLVSLGVVPYMLDTQFRMHPA 748
Query: 444 ISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF--GGREEFIEHSCRNM 501
+ FP+ FY+ ++++ + R F P +I E +S N
Sbjct: 749 LGKFPSDAFYDKQLKNGTPRAMRPTPIGFNWPQPNVPICYIPTHPTNAMENNDSNSYSNR 808
Query: 502 VEVSVVMKILLNLYKAWIDSKE--KLSIGIVSPYSAQVVAIQEKLGSKYV------NSAG 553
E +V+ L + ++ ++E IGIV+PY+AQV +++ + + N+
Sbjct: 809 AEAELVLAYL----RGFLSAQELRPKDIGIVTPYAAQVRLLRQMIRRAGIQTGVDRNTGE 864
Query: 554 FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNART 613
++V S+DGFQG E++L+I+STVR+N S+GF+S+ +R NV LTRAR L ++G+ T
Sbjct: 865 CGIEVSSVDGFQGREKELMIVSTVRANTNRSLGFVSDPRRCNVTLTRARRGLVVIGHENT 924
Query: 614 LTRKKSVWEALVH 626
L + VW V
Sbjct: 925 LRCDRKVWGPYVQ 937
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 132/240 (55%), Gaps = 10/240 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E +P+ L G + +L GD CQL +V K + A +SLFERL L
Sbjct: 624 ILIDESTQATEPECMVPVVL-GAQQLILVGDHCQLGPVVMCKKAANAGLAQSLFERLVVL 682
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T +R + P F
Sbjct: 683 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNLSFVWPSPDKPMFFYKT 742
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G+EE S N E +VV +I K+ I ++ IGI++PY Q +V +
Sbjct: 743 SGQEEIASSGTSYLNRTEAAVVERITTKFLKSGIKPEQ---IGIITPYEGQRSYLVQYMQ 799
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
GS + + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRAR
Sbjct: 800 YSGSLH-SKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 858
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRTLVCTP 85
LN SQ AV + L++ C LI GPPGTGKT T + ++ L++ + + LVC P
Sbjct: 461 LNHSQVYAVKTVLQRPLC-------LIQGPPGTGKTVTSATIVYHLVKSCGQRQVLVCAP 513
Query: 86 TNVAIKELAARV 97
+N+A+ +L ++
Sbjct: 514 SNIAVDQLTEKI 525
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 173/337 (51%), Gaps = 35/337 (10%)
Query: 328 EKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLK-------ESE 380
E L+ + S +KRA + ++T V+ E ++IDE AQ E
Sbjct: 889 EAMTLKTQMISEAVKRARIVIATCVGCGN-EIVSSEVFTKVIIDECAQSIGKLTLDIECS 947
Query: 381 STIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYR 439
+ IPL S VL GD QL + S+ + SL ERL+ S HLL++Q R
Sbjct: 948 NIIPLTHS-CNQLVLIGDHKQLRPTILSQDALFKGLSISLLERLAIFAPSCVHLLNVQRR 1006
Query: 440 MHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG--------PYSFINVFGG-- 489
MHPSIS FPN +FYE+++ D V F + P+ G F++V G
Sbjct: 1007 MHPSISQFPNQHFYEHRLTDGENV--------FAYTPLKGFKWPCENFNVCFVDVSIGCA 1058
Query: 490 ---REEFIEHSCRNMVEVSVVMKILLNLYKAW-IDSKEKLSIGIVSPYSAQVVAIQEKLG 545
E S N++E +VV+ +L + A I S++ IGI++PY +Q ++ K+
Sbjct: 1059 GSNYERPQGQSKYNIIETNVVVALLSSFISAGEITSRQ---IGILTPYDSQKYHLKTKIN 1115
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
S + + +++ S+DGFQG E+DLII S VRSN+ G++GFL +S+R+NV LTRAR +
Sbjct: 1116 STFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRMNVMLTRARRGI 1175
Query: 606 WILGNARTLTRKKSVWEALVHDANARQCFFNADDDKD 642
++G+ TL + + W+A + + R D K+
Sbjct: 1176 VVVGDRFTLMNETTNWKAWLQFLSDRNSIIRISDLKE 1212
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 148/261 (56%), Gaps = 20/261 (7%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++ +++DE+ Q +E E + ++ ++ L GD CQL ++ SK + + G +F RL
Sbjct: 573 IDTVLVDESTQAEEPEVLVCF-MNSVRQIFLVGDHCQLGPVLNSKDARKYGLGLPMFSRL 631
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE--KRFLHGPMYGPYS 482
LG+ + L QYRMHP++S F + FY+ +++ T +R + KRF P
Sbjct: 632 LQLGHEPYRLQFQYRMHPALSEFSSHTFYDGVLQNGVTALERQFNSLKRFWFV-QNRPMM 690
Query: 483 FINVFGGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
F+ G+E F S N EV+V+ I++ + + ++ IG+++PY AQ AI
Sbjct: 691 FVAT-AGKESFGSTATSYLNDEEVTVIRDIIVKMIDCGVSPEQ---IGVITPYIAQKQAI 746
Query: 541 Q------EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
+ +LG +N A+++ S+D FQG E+D II STVRSN+ IGFL N +R+
Sbjct: 747 RVRLTKDTELGVNVMN----AIEIASVDSFQGREKDFIIFSTVRSNSTNEIGFLKNPQRL 802
Query: 595 NVALTRARHCLWILGNARTLT 615
NV++TRA++ L ++GN TL+
Sbjct: 803 NVSITRAKYGLVVVGNPSTLS 823
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 21 GPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL--VILLQMKF 78
P+L TLN Q + V+ Q ++ LI GPPGTGKT T + ++ +
Sbjct: 401 APNLP-TLNQVQYEVVMKSFTQ-------SLSLIQGPPGTGKTVTSATIIYHAVHSNPGK 452
Query: 79 RTLVCTPTNVAIKELAARVV 98
+ LVC P+N+A+ +LAA++V
Sbjct: 453 KVLVCAPSNIAVDQLAAKIV 472
>gi|444320685|ref|XP_004180999.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
gi|387514042|emb|CCH61480.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
Length = 1202
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 160/324 (49%), Gaps = 59/324 (18%)
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
++ L +++DE+ Q E+ + +PL L GI+ V GDE QL S SN SL
Sbjct: 891 GLKELPVVIMDESTQSSEAATLVPLSLPGIRTFVFVGDEKQL-----STFSNVPQLEMSL 945
Query: 421 FERLSYLG-YSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
FER+ G Y+K H+L Q+RMHP+IS FP FY +++D T + R++ G Y
Sbjct: 946 FERVLLNGRYAKPHMLDTQFRMHPTISEFPIKTFYNGELKDGITP-----QDRYIEGINY 1000
Query: 479 GPYSFINVFGGREEFIEHSCR--------NMVEVSVVMKILLNLYKAWIDSK-EKLSIGI 529
P F +V+ G EE + H+ N E ++K+ LYK +D K ++ I I
Sbjct: 1001 -PLYFYDVYKGGEEKVFHTQNGISGFTYTNRHEAKEIVKV---LYKLILDKKIQRKEISI 1056
Query: 530 VSPYSAQVVAIQEKLGSK-YVNSAGFA--------------------------------- 555
++PYSAQ I + L +N +
Sbjct: 1057 ITPYSAQRDLISDILAEDLLINPQSLSIIRDVDEVDLLNNKNNSSLNNESRKKTINIING 1116
Query: 556 VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
+ V +ID FQG E + II S VR+N IGFL++ +R+NVALTRAR+ L ++GN+R L+
Sbjct: 1117 IYVATIDSFQGHENNFIIFSCVRNNPEKRIGFLNDRRRLNVALTRARNGLIMIGNSRVLS 1176
Query: 616 RKKSVWEALVHDANARQCFFNADD 639
S+W + + ++ F + D
Sbjct: 1177 SGGSLWRSYIKYIERKKLIFKSLD 1200
Score = 47.4 bits (111), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ--MKFRTLVC 83
ST N+SQ A+ L I ++ GPPGTGKT T+ +++ +++ F LV
Sbjct: 727 STFNESQKAAIQHVLNN-------DITIVQGPPGTGKTSTIEEIILQMIKNFNSFPILVV 779
Query: 84 TPTNVAIKELAARVVK 99
+N+AI +A + VK
Sbjct: 780 AASNIAIDNIAEKFVK 795
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 16/266 (6%)
Query: 371 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS 430
DEA+Q E E+ + + +K VL GD QLP V + + + S+FERL
Sbjct: 578 DEASQALEPETLKAI--NEVKKVVLIGDFNQLPPTVVTTKAKQGGLDLSMFERLIQNKVF 635
Query: 431 KHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM-YGPYSFINVFGG 489
LL++QYRMHP+IS FP+ FY+ + D T ++RS + P+ + P FI+ G
Sbjct: 636 TTLLNVQYRMHPAISSFPSKNFYKGNLHDGVTEQQRSDPRLDHFFPVEHWPVVFIH-HEG 694
Query: 490 REEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK 547
+E E+ S N+ EV +V ++ L +E +GI+S Y++Q+ I E + +
Sbjct: 695 KESVGENGASYYNVNEVGIVTAVIGELKNRGFQDRE---LGIISTYNSQIQLISENIEKQ 751
Query: 548 YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
++ S+D FQG E+++I++S VRSN IGF+S+ +R+NVALTRAR L +
Sbjct: 752 G------NIQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTRARKGLVV 805
Query: 608 LGNARTLTRKKSVWEALVHDANARQC 633
+GN RTL+ ++ W L+ +QC
Sbjct: 806 VGNMRTLSTDQN-WRKLILTYGEKQC 830
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 32/329 (9%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
+++ + A + + T S+SY H ++ + L++DE+ Q E ++ + G H VL
Sbjct: 988 IENIIISSAKVVVCTCSTSYDNH-LSRVHFSSLIVDESTQAIEPDTLCAIG-HGCSHIVL 1045
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QL +V + ++ + SL+ERL G H L++QYRMHP++S FP++ FY
Sbjct: 1046 MGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSNTFYNG 1105
Query: 456 KIRDSSTVRKRSYEKRFLHGPMY------GPYSFINVFGGREEFIEHSCRNMVEVSVVMK 509
+++ T R + L + P F +V G E S RN E+ V
Sbjct: 1106 MLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFWHVQGTHEIGHGTSLRNDTEILCVEA 1165
Query: 510 ILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA-VKVMSIDGFQGGE 568
I+ L K + ++ IGIV+PY Q I+ +L AG++ V V S+D FQG E
Sbjct: 1166 IVDQLLKCY--ELKQSDIGIVTPYDYQKCQIEMQL-----KDAGYSEVFVNSVDAFQGHE 1218
Query: 569 EDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDA 628
+++II STVRS + IGFL + +R+NV LTR R L I+GNA L S W +L+
Sbjct: 1219 KEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALA-IDSTWRSLI--- 1273
Query: 629 NARQCFFNADDDKDLGKAILAVKKELDEL 657
Q ++N +L + ++LD+L
Sbjct: 1274 ---QHYYN--------NKVLVMGRDLDQL 1291
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 137/272 (50%), Gaps = 17/272 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E E IPL V GD QL ++ +K A +SLFERL L
Sbjct: 642 VLVDEATQAAEPECMIPL-------VVFVGDHLQLGPVIMNKKVARAGASQSLFERLIML 694
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP +S FP++ FYE +++ T +R + P+ P F
Sbjct: 695 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQN 754
Query: 487 FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI--QE 542
G +EE N E + V KI+ +KA + + IGIV+PY Q I
Sbjct: 755 LG-QEEISSSGTSFLNRTEAANVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYIVNHM 810
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+L V+V S+D FQG E+D II+S VRSN IGFLS+ +R+NVALTRAR
Sbjct: 811 QLHGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAR 870
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
L ILGN + L K +W L+ + C
Sbjct: 871 FGLVILGNPKVLN-KHPLWHYLLVHYKEKGCL 901
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + ++ L +M LVC P+
Sbjct: 480 LNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVTSATIVYQLSKMNPGPVLVCAPS 532
Query: 87 NVAIKELAARV----VKLVKESVERDCRDALFFPLGDILL---LGNNE 127
NVA+ +L ++ +K+V+ + + R+AL P+ + L + NN+
Sbjct: 533 NVAVDQLTEKIHLTGLKVVRLTAK--SREALDGPISFLTLHEQVANND 578
>gi|294946503|ref|XP_002785099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898511|gb|EER16895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 422
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 138/277 (49%), Gaps = 21/277 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDE Q E + +PL G K VL GD QL A + S ++E G+SLFER+
Sbjct: 99 VVIDECTQATEPATLVPLT-RGAKRCVLLGDHKQLSATICSTAASERGLGKSLFERVLES 157
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV- 486
G HLL +Q RMHPSI+ F N FYE ++ R + + G +Y P S + V
Sbjct: 158 GGRLHLLDVQRRMHPSIAEFSNINFYEGRLHSEVGERAK------IPG-LYWPASGVQVC 210
Query: 487 ------FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
G E + S N E V+ ++ KA ++ + IGIV PYS Q
Sbjct: 211 LVNIDALSGGETRVGTSFSNRAEAKAVIDAMVVAVKAGVEPGD---IGIVVPYSGQKTQK 267
Query: 541 QEKLGSKY--VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
+ L S Y + + + ++D QG E +LI+ S VRSN G IGF + +R+NV L
Sbjct: 268 ERMLESDYRLPRESVERISINTVDACQGSERELILFSAVRSNRDGDIGFTGDPRRMNVVL 327
Query: 599 TRARHCLWILGNARTLTR-KKSVWEALVHDANARQCF 634
TRA+ L + G+ +TL+ + W VH A + C
Sbjct: 328 TRAKRSLVVFGDVKTLSADTEGDWARWVHWAKSTGCM 364
>gi|167533295|ref|XP_001748327.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773139|gb|EDQ86782.1| predicted protein [Monosiga brevicollis MX1]
Length = 879
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 167/309 (54%), Gaps = 33/309 (10%)
Query: 326 AVEKDL--LEDLLKSFCLKRASLFLSTASSSYM--LHSVAMEPLNFLVIDEAAQLKESES 381
A++KDL L++ +++ L +A + +T + + + L A + +IDEAAQ E+E+
Sbjct: 415 AMKKDLSALQEKSRNW-LSQADIICTTLNGAALDDLTRAAGVSFAYTIIDEAAQCAETEA 473
Query: 382 TIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH---LLSIQY 438
+ LQ G K +L GD QLPA + S + + +GRS+FERL L ++ +L +QY
Sbjct: 474 LVALQRCGSK-TILVGDHRQLPATLLSPLGSR-VYGRSMFERLYPLLHAIQAAVMLDVQY 531
Query: 439 RMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF----------- 487
RMHP I ++ FYE ++ TV R L G P+ + +
Sbjct: 532 RMHPKICAIASNLFYEGRLETDPTVATRRSRDPILRGTKESPFLWYDTPPETEAAMTRGG 591
Query: 488 -GGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
GG +I N+ E V++ LL L + + + +++ IV+PY+AQ I + L
Sbjct: 592 QGGPNSYI-----NVREAEQVIQCLLTLCRIRLGLRNRVT--IVTPYAAQRNCISDHLTW 644
Query: 547 KYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLW 606
+ +A AV+V ++D QG E D+II S VR++ ++GF S+ +R+NVALTRA+ CL
Sbjct: 645 AFGKAAN-AVRVSTVDAMQGQESDVIIYSAVRTS---ALGFTSDRRRINVALTRAKTCLI 700
Query: 607 ILGNARTLT 615
+LG+ LT
Sbjct: 701 VLGSKLLLT 709
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 25/89 (28%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM----------- 76
LN SQ A+ +M H++ + I GPPGTGKT T+ ++V + Q
Sbjct: 224 LNASQRAAI-----EMALTHRSCMVAIQGPPGTGKTHTIYHMVVTMAQTLSDSGSNGGAT 278
Query: 77 ---------KFRTLVCTPTNVAIKELAAR 96
+ L+C P+N AI E+ R
Sbjct: 279 RIQRPTDSHAQKILICAPSNAAIDEILVR 307
>gi|254578954|ref|XP_002495463.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
gi|238938353|emb|CAR26530.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
Length = 1101
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 166/329 (50%), Gaps = 47/329 (14%)
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
+A + +T ++ A++ L +++DE+ Q E+ + +PL L GI+ V GDE QL
Sbjct: 778 QAQILFTTTITAGGRRLKAIKELPVVIMDESTQSSEAATLVPLSLPGIRKFVFVGDEKQL 837
Query: 403 PAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDS 460
S S SLFER+ G K H+L QYRMHP IS FP FY ++D
Sbjct: 838 -----SSFSQIPQLEMSLFERVLLNGCYKNPHMLDTQYRMHPIISEFPRQRFYGGLLKDG 892
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMK-----ILLNLY 515
T +++++ + P++ F+ G E + +S + + K +L +Y
Sbjct: 893 VTEEQKNWQS--IKYPLF----FLRCDLGDETKVTNSHNGLRGYTYTNKHECQLLLQMVY 946
Query: 516 KAWIDSK-EKLSIGIVSPYSAQVVAIQEKL-GSKYVNSAGFAVK---------------- 557
K +D + + IGIV+PYSAQ AI E L + VN G A++
Sbjct: 947 KLILDKQVSRDQIGIVTPYSAQRDAISELLVQDRIVNPQGLAMEQEIDEMDPFDAMAGSK 1006
Query: 558 -----------VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLW 606
+ ++D FQG E++ I+ STVR+N G IGF+++++R+NVALTRA++ L
Sbjct: 1007 KNSINIVNDIYIATVDSFQGHEKNFILFSTVRNNPLGKIGFVNDARRMNVALTRAKNGLI 1066
Query: 607 ILGNARTLTRKKSVWEALVHDANARQCFF 635
++GN TL +W+ + N+RQ F
Sbjct: 1067 LVGNDHTLRNGSDLWKDYIDYLNSRQLIF 1095
>gi|194865311|ref|XP_001971366.1| GG14918 [Drosophila erecta]
gi|190653149|gb|EDV50392.1| GG14918 [Drosophila erecta]
Length = 1681
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 189/372 (50%), Gaps = 45/372 (12%)
Query: 281 LSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFC 340
L+ + + K+ + YLL + H R+LQ ++LN P +++ E + C
Sbjct: 1314 LTTDIQQLKQKANLTSTYLLQ----QLHQKERQLQLISDQLN-PPLTQREEFE--ISQTC 1366
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
+ RA++ +T SS L + ++ + +IDEA Q E + +P++ G+ H VL GD
Sbjct: 1367 VARANIICTTLSSCVKLANY-VDFFDICIIDEATQCTEPWTLLPMRF-GLSHLVLVGDTQ 1424
Query: 401 QLPAMVESKVSNEACFGRSLFERL-------------SYLGYSKHL-LSIQYRMHPSISC 446
QLPA+V SK + + S+F+R+ + L ++K LS+QYRMHP I
Sbjct: 1425 QLPAVVLSKKAIDFGLCNSMFDRIQRSLQTQLDKPGSNQLMHTKLFKLSMQYRMHPEICR 1484
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH--SCRNMVEV 504
+PN YFYE+++ ++ RF + PY IN+ ++ S N E
Sbjct: 1485 WPNKYFYEDQLINAECT------ARFASALI--PYCVINLKYTQDNSCAQTKSISNDEEA 1536
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
V K+L + K ++ S G++SPY Q + + L ++N + ++D +
Sbjct: 1537 RFVAKLLQEMDKHM--PSKRFSYGLISPYQNQCYVLSQ-LIPNHMN-----ITPQTVDSY 1588
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E+D+IIIS R+ GFL+N +R+NVALTR R CL I GN L + +W L
Sbjct: 1589 QGLEKDVIIISNARTR---GCGFLTNYQRLNVALTRPRRCLVICGNFEDL-KTVEMWRNL 1644
Query: 625 VHDANARQCFFN 636
+ DA +R+ +F+
Sbjct: 1645 LDDARSRKVYFD 1656
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
+N+ Q VL +++ D + ++ LI GPPGTGK+K +S L + L + + L
Sbjct: 1177 MNEHQENIVLRTYQRIIDDLQPSLTLIQGPPGTGKSKVISELCLQTLYGNAAKTLDRKIL 1236
Query: 82 VCTPTNVAIKEL 93
+C +N A+ +
Sbjct: 1237 ICAHSNTAVDHI 1248
>gi|157123740|ref|XP_001653871.1| splicing endonuclease positive effector sen1 [Aedes aegypti]
gi|108874291|gb|EAT38516.1| AAEL009618-PA [Aedes aegypti]
Length = 675
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 160/333 (48%), Gaps = 25/333 (7%)
Query: 310 VLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLV 369
+ R L +F +++L + + K F K + + S + + +
Sbjct: 331 IKRLLPENFEDMDLYDKERRGMEMHAKKQFVAKADVVCTTLGSCGSLTDYTQSLRFDVCI 390
Query: 370 IDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--SYL 427
IDEA Q E S PLQ +K +L GD QLP +V K EA SLF R+ S++
Sbjct: 391 IDEATQCTEIASFTPLQFD-VKKLILVGDVKQLPPLVFGKECAEAGLKNSLFSRIQNSFI 449
Query: 428 GYSKH---LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G + +L+ QYRMHP I +PN YFY+ K+ K G + PY+
Sbjct: 450 GTNLEGVKMLTTQYRMHPEILKWPNEYFYDGKLTSDPKATK-------CDGFPFKPYTIF 502
Query: 485 NVFGGREEF-IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEK 543
++ + + +EH N E+ V+K+L + + SI I++PYS ++
Sbjct: 503 SLECQQNQTQMEHQIYNNEEIQFVLKLLTEIIQF---CDRHTSIAIITPYSRHKRECEKF 559
Query: 544 LGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
L +K + V V+SID QG E D+++IS RS GFL N +R+NVALTRAR
Sbjct: 560 LQAKKITQ----VSVLSIDSVQGQEYDVVVISLARS---IGTGFLDNPQRLNVALTRARK 612
Query: 604 CLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
CL + GN L R +VW L+ DA R+ ++
Sbjct: 613 CLVMCGNFADL-RDANVWSDLLRDAEHRKVLYH 644
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----MKFRTLVC 83
LN Q +LS +Q ++ I LI GPPGTGK+K +S L++ L + + + LVC
Sbjct: 171 LNVQQGDILLSVFQQCLDMNRPHIMLIQGPPGTGKSKLISNLILQLRRGIPNRRPKILVC 230
Query: 84 TPTNVAIKELAARVVKLVK 102
+N A+ + +++ L +
Sbjct: 231 AQSNTAVDVIVLKLMMLFR 249
>gi|168057212|ref|XP_001780610.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667976|gb|EDQ54593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1687
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 134/230 (58%), Gaps = 19/230 (8%)
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF------ 472
SLFER G H+L+ QYRMHPSI C+P+ FY +RDS+ R S + F
Sbjct: 878 SLFERFQGAGVPVHMLTTQYRMHPSICCYPSQQFYGGALRDST--RTSSMQSIFRQEVCR 935
Query: 473 ----LHGPMY--GPYSFINVFGG--REEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEK 524
+ G + G Y F++V G REE + HS N E VV ++ + K + S K
Sbjct: 936 EGINIRGCKFRLGHYYFMDVGWGIEREEIVGHSRANFEEALVVCNVVEGVVKGLL-SGLK 994
Query: 525 LSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
++G+++PY AQ I+ +L + ++ G A +V ++DGFQG E+D+I++S VR+
Sbjct: 995 PNLGVITPYIAQRSEIEGQLERRGID--GTACEVNTVDGFQGREKDVIVLSCVRAMADRG 1052
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+GF+S+ +R+NVALTRA+ L I+G+A TL + + W L+ DA R C+
Sbjct: 1053 LGFVSDERRMNVALTRAKFSLIIVGHAETLQKWSATWGLLIDDARKRGCY 1102
>gi|219113369|ref|XP_002186268.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583118|gb|ACI65738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1189
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 348 LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE 407
L TA + M A + +V+DEAAQ E + QL G +HAVL GD QLPA V
Sbjct: 825 LGTAGNRVM---EAADKFEVVVVDEAAQSVEPATLSAFQL-GSRHAVLVGDPQQLPATVF 880
Query: 408 SKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
+ + + RSLF+RL G ++L+ QYRMHPSIS FP FY + D VRK
Sbjct: 881 NISGRLSKYDRSLFQRLEEAGQPVYMLNEQYRMHPSISHFPRHIFYGGTLLDGPNVRKSD 940
Query: 468 YEKRFLHG-----PMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSK 522
Y L P + P ++ +EE S N E + + + + L
Sbjct: 941 YGNPLLGMVTRTLPSFSPLMILD-LDSKEERGGTSLSNSGEAQLAVYLYMRLKGISRGLS 999
Query: 523 EKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG 582
+ + +++PY+ Q ++E G + V+V ++D FQG E +++I S VR+
Sbjct: 1000 AETKVAVITPYAQQARMLREYFGDALGPNYEKFVEVNTVDAFQGREANIVIFSAVRAAGS 1059
Query: 583 GSIGFLSNSKRVNVALTRARHCLWILG 609
IGFLS+ +R+NVALTRA+H L+++
Sbjct: 1060 HGIGFLSDVRRMNVALTRAKHFLFVIA 1086
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 153/297 (51%), Gaps = 49/297 (16%)
Query: 368 LVIDEAAQLKESESTIPLQLSG--IKHA-------------------------VLFGDEC 400
++IDE+ Q E E IP+ L + HA +L GD C
Sbjct: 683 VLIDESTQAAEPECLIPMVLGAKQLPHAAQWVFLLLASPHVHRWRTSMLTAKVILVGDHC 742
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDS 460
QL ++ K + EA +SLFERL LG L +QYRMHP +S FP++ FYE +++
Sbjct: 743 QLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNG 802
Query: 461 STVRKRSYEKRFL------HGPMYGPYSFINVFGGRE-EFIEHSCRNMVEVSVVMKILLN 513
+ + E+R + H P P F G E S N E + V K++
Sbjct: 803 TGMG----ERRLVGVDFPWHNPDK-PMMFWVQLGAEEISASGTSYLNRTEAAAVEKVVTR 857
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSAGFA-VKVMSIDGFQGGEE 569
+ + + IG+++PY Q VV++ + G+ V + ++V S+D FQG E+
Sbjct: 858 FLQNGMSPSQ---IGVITPYEGQRAHVVSVMVRNGA--VRQDLYKEIEVSSVDAFQGREK 912
Query: 570 DLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
D+I++S VRSN SIGFLS+ +R+NVALTRAR+ L +LGN R L+R + +W +L+
Sbjct: 913 DIIVLSCVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVLSR-QPLWNSLLQ 968
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 22 PSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF-RT 80
P+L LN SQ AV S L Q + LI GPPGTGKT T + ++ L +
Sbjct: 514 PTLPE-LNHSQLHAVKSVLHQ-------PLSLIQGPPGTGKTVTSAAIVYHLAHSGTGQV 565
Query: 81 LVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYL 140
LV P+NVA+ +LA ++ + V R C R V S VE + L
Sbjct: 566 LVAAPSNVAVDQLAHKMDQ-TGLKVVRLCAKT---------------REAVASPVEHLTL 609
Query: 141 DYRVKRLA 148
Y+V +A
Sbjct: 610 HYQVTHMA 617
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 138/267 (51%), Gaps = 24/267 (8%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC-FGRSLFERLS 425
+V+DE AQ E S +PL + G + V+ GD+ QLP V S+ + E LF RL
Sbjct: 463 IVVLDECAQATEPSSLVPL-VKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDVPLFTRLL 521
Query: 426 YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFIN 485
G S LL +QYRMHP+IS FP+ +FY +++ T + R + P FIN
Sbjct: 522 EGGVSSRLLEVQYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGVPWTNPACPVLFIN 581
Query: 486 VFGGREE--------------FIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVS 531
+ G E+ S N E V MK L + + + SI ++S
Sbjct: 582 IAEGSEQQALAGNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQ---EDDSVQSIVLLS 638
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFA----VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
PY+ QV + L S+ G A + V ++DG+QG E D++I STVRSN G +GF
Sbjct: 639 PYNGQVRLLTSLL-SRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGRVGF 697
Query: 588 LSNSKRVNVALTRARHCLWILGNARTL 614
LS+ +R+NVA+TRAR L +LGN TL
Sbjct: 698 LSDERRLNVAITRARRGLIVLGNQATL 724
>gi|399949986|gb|AFP65642.1| component of a tRNA splicing complex, sen1 [Chroomonas
mesostigmatica CCMP1168]
Length = 753
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 146/269 (54%), Gaps = 12/269 (4%)
Query: 371 DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS 430
DEAAQ E + P++ + K +L GD QLPA V S+ S + RSLF+RL +
Sbjct: 448 DEAAQAIELSTLSPIR-NTCKKLILVGDIQQLPATVFSQTSLNFDYDRSLFKRLQIKKFP 506
Query: 431 KHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGR 490
L QYRMHP IS F FY+N ++DS V S K F +GP F +V G
Sbjct: 507 IWFLETQYRMHPQISSFIARKFYKNGLKDSENV---SLLKNFQFLRGFGPLIFFDVCEGN 563
Query: 491 EEF---IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK 547
+ F ++S N+ E+ +V I+ + + + + SIGI++ Y Q+ Q+ G
Sbjct: 564 DRFHLKQKNSWCNLDEIRLVSFIIRGIICIFSNLSWR-SIGIIASYQGQIGEFQD-FG-- 619
Query: 548 YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
+ + F ++ S+DGFQG E++++ S+VR+ +GFLS+ +R+NVA TRA+ C W
Sbjct: 620 IMKQSEFKGQINSVDGFQGREKEIVFFSSVRAKLERGVGFLSDCRRINVAFTRAKSCFWA 679
Query: 608 LGNARTLTRKKSVWEALVHDANARQCFFN 636
+GN TL + ++ W + DA R F+
Sbjct: 680 VGNFSTLQKDQN-WAEAILDARKRGRLFD 707
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 163/302 (53%), Gaps = 23/302 (7%)
Query: 317 SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV-AMEPLNFLVIDEAAQ 375
++N N+ + +E+D KS L + ++ +T +S H + E + +++DEA+Q
Sbjct: 452 NYNPANI-ANIERDT-----KSKLLSQVNVICTTCIASG--HPILTNERFSIVIVDEASQ 503
Query: 376 LKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLS 435
E +PL L + LFGD+ QL + +K + + LF+RL+ + LL
Sbjct: 504 ATEPAILVPL-LKQSEQLFLFGDQNQLSPTIFTKEAEDGGLSIGLFQRLAN-DITPFLLE 561
Query: 436 IQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIE 495
QYRMH + FPN Y Y+ K++ + R + F P +F+NV G +E+
Sbjct: 562 EQYRMHSKLLEFPNKYIYDGKLKTGIDDKDRQIPRGFDWPREQCPIAFVNVVG-KEDINN 620
Query: 496 HSCRNMVEVSVVMKILLNLYKAWIDSKEKL---SIGIVSPYSAQVVAIQEKLGSKYVNSA 552
+S NM E +++IL KA + + L S GI++PYS+Q I L +
Sbjct: 621 YSYMNMPEAKEIVRIL----KAMVKENQDLTTDSFGIITPYSSQAKLICNLLRPDFRKLP 676
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
A ++D FQG E+++I++STVRSN GG +GFL++ +R+NV+LTRA+ + I+GN +
Sbjct: 677 TVA----TVDSFQGREKEIILVSTVRSNLGGRVGFLNDWRRLNVSLTRAKRGMIIVGNKQ 732
Query: 613 TL 614
TL
Sbjct: 733 TL 734
>gi|367015784|ref|XP_003682391.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
gi|359750053|emb|CCE93180.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
Length = 1082
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 159/324 (49%), Gaps = 52/324 (16%)
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
+A + +T ++ A++ L +++DE+ Q E+ + +PL L GI+ V GDE QL
Sbjct: 756 QAQILFTTNIAAGGRQLKAIQELPVVIMDESTQSSEASTLVPLSLPGIRTFVFVGDEKQL 815
Query: 403 PAMVESKVSNEACFGRSLFERLSYLG-YSK-HLLSIQYRMHPSISCFPNSYFYENKIRDS 460
S SN SLFER+ G Y K H+L QYRMHP IS FP FY+ ++++
Sbjct: 816 -----SSFSNIPQLEMSLFERVLLNGCYKKPHMLDTQYRMHPQISEFPIKKFYQGELKNG 870
Query: 461 STVRKRSYEKRFLHGPMY------GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL 514
T ++S+E + P+Y GP S VF + + N E ++K++
Sbjct: 871 VTEEQKSWES--IKYPLYYYHCNEGPES--KVFNRQRGMSGFTYNNRHECDAILKVI--- 923
Query: 515 YKAWIDSKEKL-SIGIVSPYSAQVVAIQEKL-GSKYVNSAGFA----------------- 555
YK +D K IG+++PYSAQ I E L VN A A
Sbjct: 924 YKLIMDKGVKNDQIGVITPYSAQRDLISETLVNDDVVNPAKIAMEQELDEADLLDAGIGR 983
Query: 556 -------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
V V +ID FQG E++ +I S VR+N IGF S+ KR+NVALTRA+
Sbjct: 984 SNGKKNTINIINGVYVATIDSFQGHEKEFVIFSCVRNNKENRIGFASDKKRMNVALTRAK 1043
Query: 603 HCLWILGNARTLTRKKSVWEALVH 626
+ L ++GN+ + S+W+ +
Sbjct: 1044 NGLVLVGNSEVFRKGDSLWKDYIE 1067
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ--MKFRTLVCT 84
T NDSQ A+ L ++ ++ GPPGTGKT T+ +++ +++ F L
Sbjct: 610 TFNDSQKSAIQHVLNN-------SVTILQGPPGTGKTSTIEEIILQMIKNFHSFPILCVA 662
Query: 85 PTNVAIKELAA---------RVVKLVKESVERDCRDALFFPLGDILL 122
+N+AI +A +++++V E E + PLG I L
Sbjct: 663 ASNIAIDNIAEKFMVNRPDIKILRIVSEGKEAQYNNE--HPLGKICL 707
>gi|384495650|gb|EIE86141.1| hypothetical protein RO3G_10852 [Rhizopus delemar RA 99-880]
Length = 1687
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 141/266 (53%), Gaps = 28/266 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA+Q E S IPL+ + +L GD QLP V S ++
Sbjct: 1438 VIVDEASQSVEISSLIPLKFD-TQRCILVGDPNQLPPTVMSTLAT--------------- 1481
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-PMYGPYSFINV 486
+IQYRMHP IS P+ FY+++++D S + K S H P + PY F +V
Sbjct: 1482 -------NIQYRMHPEISDLPSRLFYQSRLQDGSEMDKIS--SAVWHALPEFPPYCFYDV 1532
Query: 487 FGGREEFIE-HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+E+ S N+ E + ++ L K IG+++PY QV ++ +
Sbjct: 1533 RDGQEKMGRGKSIFNVAEADAAVSLVDLLLTKLPTMKFASKIGVITPYKQQVGQLKARFQ 1592
Query: 546 SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
++ + A+ ++DGFQG E+++II S VR+ +G IGFL++ +R+NV LTRA+ L
Sbjct: 1593 KRFGDGIVDAIDFNTVDGFQGQEKEIIIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSL 1652
Query: 606 WILGNARTLTRKKSVWEALVHDANAR 631
++LG+A +L+R + W LV DA R
Sbjct: 1653 YVLGHANSLSRSE-YWGDLVQDAKKR 1677
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 11/56 (19%)
Query: 53 LIWGPPGTGKTKTVSMLLVILLQMKFRT-----------LVCTPTNVAIKELAARV 97
LI GPPGTGKTKT+ L+V LL+ + ++ LVC P+N A+ E+ R+
Sbjct: 1219 LIQGPPGTGKTKTILALIVSLLEQRHKSTPGQPYGGSKLLVCAPSNAAVDEITKRL 1274
>gi|307173791|gb|EFN64578.1| Helicase sen1 [Camponotus floridanus]
Length = 1634
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 171/331 (51%), Gaps = 35/331 (10%)
Query: 325 SAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAM-----EPLNFLVIDEAAQLKES 379
S+ ++ + + ++ L A + T SS Y ++ E ++ ++DEA Q E+
Sbjct: 1308 SSKDRTKYQRMAENIILTGADIIACTLSSCYTNQMESIFGGYKERISVCIVDEATQSCEA 1367
Query: 380 ESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-----LL 434
E+ IPL L G+K VL GD QLPA V S+ + + +S+F R+ + S+ +L
Sbjct: 1368 ETLIPLML-GVKTLVLVGDPNQLPATVLSQRAKKLKLDQSVFSRIQNVFTSQQNNPIIML 1426
Query: 435 SIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
++QYRM +IS +PN YFY+ K+++S R M P+ + +
Sbjct: 1427 NMQYRMDYAISYWPNKYFYDGKLKNSIDFR------------MKFPFHSYRILDHNFKQN 1474
Query: 495 EHSCRNMVEVSVVMKILLNL--YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVN-- 550
E N +E + K +L + + W ++ +S+G+++PY+ Q + K+ K +
Sbjct: 1475 EDKFSNTIEAEFIAKTILAMLTFTNW-ENVNPISLGVLTPYNNQRTLVLNKINEKISSIP 1533
Query: 551 ---SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
+ +V ++D FQG E D+II+S VRS+ IGFLS+ +R+ VALTRA++ L +
Sbjct: 1534 DNLRNKISFEVNTVDSFQGQERDIIIMSCVRSH---GIGFLSDRQRLCVALTRAKYSLIL 1590
Query: 608 LGNARTLTRKKSVWEALVHDANARQCFFNAD 638
GN T + K +W AL+ DA +R D
Sbjct: 1591 CGNFNTFLKDK-MWNALLSDAKSRGVLCRVD 1620
Score = 45.1 bits (105), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL------QMKFRTL 81
LN Q +AV + + + + I GPPGTGK+K + L+ +L + R L
Sbjct: 1126 LNPKQMEAVYKVTKTV-LKKENKLCFIQGPPGTGKSKVIVNLVSQILYSEHTNRKTLRIL 1184
Query: 82 VCTPTNVAIKELAARVVKL 100
+C P+N AI E+ R++ +
Sbjct: 1185 ICAPSNAAIDEIVLRLLNV 1203
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 144/282 (51%), Gaps = 31/282 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL +V K + A +SLFERL L
Sbjct: 601 VLIDESTQATEPEILVSI-VRGVRQLVLVGDHCQLGPVVICKKAAMAGLSQSLFERLVLL 659
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSST---------------VRKRSYEKRF 472
G L +QYRMHP +S FP++ FY+ +++ T R +
Sbjct: 660 GIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTESELELFFVYLRPIFADDRQMKGVD 719
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIV 530
H P +F G EE N E + V K++ L K + + IG++
Sbjct: 720 WHWPTPNKPAFFWHCSGAEELSSSGTSFLNRTEAANVEKLVSKLIKGGVQPNQ---IGVI 776
Query: 531 SPYSAQ------VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
+PY Q + Q L SK S V++ S+D FQG E+D II++ VRSN+
Sbjct: 777 TPYEGQRSFIVNYMHTQGTLNSKLYES----VEIASVDAFQGREKDYIIVTCVRSNDILG 832
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVH 626
IGFL++ +R+NVA+TRA++ + ++GNA+ L R + +E + H
Sbjct: 833 IGFLNDPRRLNVAITRAKYGIVVVGNAKVLARHELWYELINH 874
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ-MKFRTLVCTPT 86
LN SQ QAV L + + LI GPPGTGKT + ++ L+Q LVC+P+
Sbjct: 440 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTDGNVLVCSPS 492
Query: 87 NVAIKELAARVVK 99
N+A+ LA ++ K
Sbjct: 493 NIAVDHLAEKIHK 505
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 150/270 (55%), Gaps = 11/270 (4%)
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
+E ++ ++IDE+ Q E E I L + +K L GD CQL ++ S + + G +F
Sbjct: 563 LEHIDTVLIDESTQADEPECLICLN-NSVKQLFLVGDHCQLGPILNSSRAKKNGLGLPMF 621
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGP 480
RL LG+ + L QYRMHP +S F + FY+ +++ T +R + ++ P
Sbjct: 622 SRLLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKP 681
Query: 481 YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
FI G+E + + S N EV ++ +I++ + +D + IG+++PY AQ
Sbjct: 682 MMFIAA-NGKESYGSNGTSYLNDEEVFIIEQIIIKMLVNKVDPSQ---IGVITPYIAQKQ 737
Query: 539 AIQEKLG-SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
AI +L ++ V+ A +++ S+D FQG E+D II STVRSN IGFLS +R+NV
Sbjct: 738 AIISRLSLNRRVSEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNV 797
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
++TRA++ L ++GN TL + +W A +
Sbjct: 798 SITRAKYGLVVVGNPETLM-QNPLWCAYLQ 826
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 19/105 (18%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKF--RTLVCTPTNVAIKELAARV----VKLV--- 101
+ LI GPPGTGKT T + ++ ++Q + LVC P+N+A+ +L ++ VK++
Sbjct: 418 LSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGIKIIETGVKVIRVY 477
Query: 102 ---KESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYR 143
+E E D + L +++ E+LK D + +Y DY+
Sbjct: 478 SKSRELAEESLHD---YSLKTLMI----EQLKKDKEMFLLYQDYK 515
>gi|123449356|ref|XP_001313398.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121895280|gb|EAY00469.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 285
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 151/272 (55%), Gaps = 15/272 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
L++DE +Q + E IPL L +L GD+ QLP ++ +K S A + ++ +RL L
Sbjct: 9 LIVDECSQSVDPEVIIPL-LKTKTRLILVGDQKQLPPLLFAKESKIAKYDNTIIDRLEKL 67
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
++ Q+RMHPSIS FP++ FY++K+ D + R+ +++ P G P F
Sbjct: 68 N-----IAPQFRMHPSISQFPSAEFYDSKVADGISQEYRTKCLKWIQWPNNGLPILFWEF 122
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G EE N+ V + + NL ++ IG++SPYS Q +++ L
Sbjct: 123 KGKPEEKSSDGKSNINRDQV--QCVANLIDILVNKANPSDIGVISPYSGQNFYLRDNL-H 179
Query: 547 KYVNSAG----FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+Y AG +++ SID FQG E++LII STV+SNN IGFL++ + +NVALTRAR
Sbjct: 180 RYTKIAGEDYIKRIEISSIDSFQGREKELIIFSTVKSNNTYDIGFLNDERSLNVALTRAR 239
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
L I+G++ T + K+ W +L+ ++ +C
Sbjct: 240 CGLIIIGDSNTFIKSKN-WLSLLRYYSSHRCL 270
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 158/313 (50%), Gaps = 38/313 (12%)
Query: 331 LLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
LL+ LL++ L A + +T +++S +L + F+ +DEA+ E S +PL
Sbjct: 676 LLKRLLQAEVLHEADVVCTTCLSATSRVLEVID---FPFVFLDEASMATEPLSIVPL-TK 731
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCF 447
G + GD QLP ++ S+ + + G SLFERL + +L QYRMHPSI+ F
Sbjct: 732 GSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERLIHEQAVPSIMLDTQYRMHPSIAAF 791
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE---FIEH-------- 496
+ FY ++RD + V + LH P +F+ G + F+ H
Sbjct: 792 SSEAFYNGQLRDGTVVDGQV--DPVLHPPTT---AFLLPDGDSSKSLTFLNHDFPESPQN 846
Query: 497 -SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
S N E V I+ +L + D K IG+++PYSAQ+ I E L F
Sbjct: 847 RSIANHHEAGRVCDIVADLLASNPDLK-GADIGVIAPYSAQIRLITEFLTIDERRQRAFR 905
Query: 556 -------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+++ ++DGF+G E+ +II STVRSN GG +GFL + +R+NV LTRA+
Sbjct: 906 QWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNTGGFLGFLGDWRRLNVGLTRAK 965
Query: 603 HCLWILGNARTLT 615
L +LG+ RTL+
Sbjct: 966 RALIMLGSLRTLS 978
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCT 84
LN SQ +A+ L + + L+ GPPGTGKT+ + + +L Q+ LVC
Sbjct: 534 LNPSQTRAIAMMLSER-------LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCA 586
Query: 85 PTNVAIKEL 93
TNVA+ L
Sbjct: 587 HTNVAVDNL 595
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 144/262 (54%), Gaps = 17/262 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
L IDEAAQ E+ IP++ + +L GD CQLP V+ + +A G++L ER+
Sbjct: 268 LFIDEAAQALEAACWIPMR--RVSRVILAGDHCQLPPTVKCYEALKAGLGKTLMERIVEN 325
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY----GPYS 482
LL +QYRM+ I F + +FY N++ + V+ RS L PM +
Sbjct: 326 KPEVVTLLKMQYRMNEEIMRFSSDWFYNNQVESAPDVKYRSILD--LDVPMTWIDTSQFD 383
Query: 483 FINVFG--GREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDS---KEKLSIGIVSPYSA 535
F G +EEF+ S N E + M L ++ KE++ +G++SPY A
Sbjct: 384 FPEESGITFKEEFVGESFGRINKAEAELTMLALQQYFEKIGKERIIKERIDVGVISPYRA 443
Query: 536 QVVAIQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
QV ++++L + + + + ++DGFQG E D+I+IS VR+N+ G IGFL + +R+
Sbjct: 444 QVQYLRQQLKKREFFKPFKSLISINTVDGFQGQERDIIMISLVRANDEGQIGFLRDLRRM 503
Query: 595 NVALTRARHCLWILGNARTLTR 616
NVA+TRAR L ILG+A TLTR
Sbjct: 504 NVAITRARMKLIILGDASTLTR 525
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 20 FGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFR 79
F P + LN +Q AV LR + ++ GPPGTGKT T+ + L + +
Sbjct: 89 FSPLHFTYLNATQEDAVNKVLR------AKDVAIVHGPPGTGKTTTLVEAIYETLMRESQ 142
Query: 80 TLVCTPTNVAI 90
LVC +N+A+
Sbjct: 143 VLVCAQSNMAV 153
>gi|354546110|emb|CCE42839.1| hypothetical protein CPAR2_204820 [Candida parapsilosis]
Length = 1078
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 64/326 (19%)
Query: 341 LKRASLFLSTA--SSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGD 398
+ +A + L+T + L S+A P+ +++DEA Q E + IPL + G++ V GD
Sbjct: 755 VAQAKVILTTTVVAGGPQLKSLAKCPV--VIMDEATQSSEPSTLIPLAVPGVEKFVFVGD 812
Query: 399 ECQLPAMVESKVSNEACFG------RSLFERLSYLG--YSKHLLSIQYRMHPSISCFPNS 450
+ QL +CF SLFER+ G S H+L IQYRMHP+IS FP +
Sbjct: 813 QRQL-----------SCFSLIPNLSTSLFERVLLNGSYVSPHMLDIQYRMHPAISEFPRT 861
Query: 451 YFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFG-GREEFIEHSCR--------NM 501
FY K+++ T R E G P F N G RE+ + + R N
Sbjct: 862 RFYNGKVKNGITADSRKME-----GIPENPVFFWNTNGNAREQSVRNFLREDRGYTYTNR 916
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-------------VVAIQEKL---- 544
EVS + ++L +L +E +IG+V+PYS Q + E+L
Sbjct: 917 DEVSYIQQVLRSLLIEKGIHRE--NIGVVTPYSGQRDLISSVLVKDDIINPTNEELQVEV 974
Query: 545 -------GSKYVN-SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
SK V+ + + SID FQG E+D +I+S VRSNN G+IGFL + +R+NV
Sbjct: 975 DIDDITNDSKPVSIHIVSGIMIASIDAFQGREKDFMIMSCVRSNNQGTIGFLKDERRLNV 1034
Query: 597 ALTRARHCLWILGNARTLTRKKSVWE 622
ALTRA++ L ++G+ L + +W+
Sbjct: 1035 ALTRAKYGLIMIGDVNCLKKGDKLWK 1060
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 23 SLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQM--KFRT 80
+ SS LNDSQ A+ S L I ++ GPPGTGKT + ++ LL+ F
Sbjct: 610 NFSSNLNDSQKAAIQSVLNN-------KISVVQGPPGTGKTSAIYETIIQLLEALNTFPV 662
Query: 81 LVCTPTNVAIKELAARVVKLVKESVER 107
LV +N+AI +A +++ +S+ R
Sbjct: 663 LVVAASNIAIDNIAEKLLPKHGKSILR 689
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 145/263 (55%), Gaps = 9/263 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E + P++L G K +L G+ + V K + +A +SLFERL L
Sbjct: 615 ILIDESTQATEPKCIGPVEL-GAKQLIL-GEITASWSCVMCKKAAKAGLSQSLFERLVVL 672
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP++S FP++ FYE +++ T R + P F V
Sbjct: 673 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVT 732
Query: 488 GGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ-VVAIQEKL 544
G+EE S N E + V KI L KA + IGI++PY Q +Q
Sbjct: 733 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 789
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
S +++ + V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRA++
Sbjct: 790 FSGSLHTKLYQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYG 849
Query: 605 LWILGNARTLTRKKSVWEALVHD 627
+ I+GN + L+ K+ +W L+++
Sbjct: 850 VIIVGNPKALS-KQPLWNNLLNN 871
Score = 46.6 bits (109), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-LQMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 453 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPS 505
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 506 NIAVDQLTEKIDK 518
>gi|429963217|gb|ELA42761.1| hypothetical protein VICG_00076, partial [Vittaforma corneae ATCC
50505]
Length = 812
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 35/303 (11%)
Query: 344 ASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLP 403
AS+ +T SSS + S+ + + ++IDEA Q E + IP + + K ++ GD QLP
Sbjct: 526 ASVICATLSSS-VSDSICLSKFDLIIIDEACQATELSTIIPFKYNPNK-VIMIGDPNQLP 583
Query: 404 AMVESKVSNEACFGRSLFERLSYLGYSKH---LLSIQYRMHPSISCFPNSYFYENKIR-- 458
V +S+++ SLFERL S H +L +QYRMHP I + +FY+N+I
Sbjct: 584 PTV---ISDQSQLQVSLFERL----LSHHQPVMLDVQYRMHPDICKLSSLFFYDNRIETF 636
Query: 459 -DSSTVRKRSYEKRFLHGPMYG--PYSFINVFGGREEFIE-HSCRNMVEVSVVMKILLNL 514
D + +R++S +G +YG P +FI++ +E+ + S N VE S+ +I L
Sbjct: 637 ADIAQLRRKSG-----YGDIYGFRPLNFIDILVKQEKIDDFKSYYNPVECSICYRISKEL 691
Query: 515 YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
++ + ++ L I +++PY Q + K N +++ +IDGFQG E D++I+
Sbjct: 692 FRRYGNT---LKIAVLTPYKGQANMLM-----KNRNYEKMGIEINTIDGFQGKECDVVIL 743
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
STVR +GF + +R+NVA+TR+R CL +LGN + L+ + SVW ++ + +
Sbjct: 744 STVRR---FGLGFTCDFRRINVAMTRSRVCLILLGNKKCLS-QSSVWSGIIDYITQQGQY 799
Query: 635 FNA 637
F +
Sbjct: 800 FTS 802
>gi|195014032|ref|XP_001983946.1| GH15286 [Drosophila grimshawi]
gi|193897428|gb|EDV96294.1| GH15286 [Drosophila grimshawi]
Length = 1706
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 170/327 (51%), Gaps = 40/327 (12%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
++RA++ +T SS L + ++ + +IDEA Q E + +PL+ G++ VL GD
Sbjct: 1391 VERANIVCTTLSSCVKLANF-IDYFDICIIDEATQCTEPFTLLPLRF-GVRGLVLVGDTQ 1448
Query: 401 QLPAMVESKVSNEACFGRSLF-------------ERLSYLGYSKHL-LSIQYRMHPSISC 446
QLPA V S+ + + G S+F +R++ + ++K LS QYRMHP I
Sbjct: 1449 QLPATVLSQKAIDFGLGNSMFARIQRNLQLQLERKRVNQVVHTKIFRLSTQYRMHPDICQ 1508
Query: 447 FPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGRE--EFIEHSCRNMVEV 504
+PNSYFY+N++ ++ +L P + PY IN+ ++ + S N E
Sbjct: 1509 WPNSYFYDNQLTNADCT-------AYLISP-FIPYCVINLSYTQDTNDVSSRSISNDEEA 1560
Query: 505 SVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGF 564
V K+L+ + K E+ G+++PYS + + + S + ++D +
Sbjct: 1561 HFVAKLLVEMNKHM--PAERYKYGLITPYSNHCYTLSQVIPS------TMKITPQTVDAY 1612
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEAL 624
QG E D+II+S R+ +GFL+N +R+NVA+TR + CL I GN L + +W L
Sbjct: 1613 QGQERDIIILSNARTR---GVGFLTNYQRLNVAITRPKRCLVICGNFDDL-QSVQIWRHL 1668
Query: 625 VHDANARQCFFNA--DDDKDLGKAILA 649
+ DA +R +F+ D +DL + +++
Sbjct: 1669 LDDARSRNIYFDVKRSDVEDLNRCLIS 1695
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 139/279 (49%), Gaps = 33/279 (11%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E G K VL GD QL ++ +K + A +SLFERL L
Sbjct: 606 VLIDEATQAAEP---------GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 656
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G L +QYRMHP +S FP++ FYE +++ T +R + P+ F
Sbjct: 657 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 716
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLG 545
G+EE N E S V KI+ +K+ + + IG+V+PY Q I
Sbjct: 717 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQ---IGVVTPYEGQRSYI----- 768
Query: 546 SKYVNSAGF----------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
VN F ++V S+D FQG E+D II+S VRSN IGFL++ +R+N
Sbjct: 769 ---VNYMQFNGTLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLN 825
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
VALTRA++ + ILGN + L+ K +W L+ + C
Sbjct: 826 VALTRAKYGVVILGNPKVLS-KHPLWHYLLTHYKEKNCL 863
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L++ + LI GPPGTGKT T + + L +M + LVC P+
Sbjct: 444 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASTVYHLAKMNPGQVLVCAPS 496
Query: 87 NVAIKEL-------AARVVKLVKESVE 106
NVA+ +L +VV+L +S E
Sbjct: 497 NVAVDQLTEKIHATGLKVVRLTAKSRE 523
>gi|448404212|ref|ZP_21572459.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena limicola JCM 13563]
gi|445663832|gb|ELZ16573.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena limicola JCM 13563]
Length = 752
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 165/328 (50%), Gaps = 49/328 (14%)
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSV 360
H + FVLR++ +S + + S + C A + +T SS+ L
Sbjct: 421 HAQHGAGEFVLRRVNASRSSNEVVST---------QYATCDGLADVVAATNSSAATLE-- 469
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
+ LV+DEA Q + S IPL + +L GD QLP ++ E+ G SL
Sbjct: 470 --REFDVLVLDEATQATCTASCIPLARA--DKVILAGDHKQLPPFSATEEPPESAAGLSL 525
Query: 421 FERLS-----YLGYSKHLLSIQYRMHPSISCFPNSYFYENKIR---DSSTVRKRSYEKRF 472
FE L Y G L + QYRMH I+ FPNS FY+ +R D + + RS
Sbjct: 526 FEHLYADGGIYEGVGIQLRT-QYRMHRDIAWFPNSRFYDRALRQGRDVTALEDRS----- 579
Query: 473 LHGPMYGPYSFINV-FGGREEFIEHSCRNMVEVSVVMKILLNLY-KAWIDSKEKLSIGIV 530
+F++ GG EE I+HS RN EV +V I L A + S E +G++
Sbjct: 580 ---------AFVSYDIGGSEETIDHSKRNDAEVRLVAHIAGELLADADLSSSE---VGVI 627
Query: 531 SPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLS- 589
+PY+AQ AI++KL +++++S G + V +ID FQG E+ I+IS VRSN G GFL
Sbjct: 628 TPYTAQANAIRKKL-ARHIDS-GRDISVDTIDSFQGSEKVAIVISLVRSNAAGETGFLGR 685
Query: 590 ---NSKRVNVALTRARHCLWILGNARTL 614
+R+NVA+TRA+ I+G+ TL
Sbjct: 686 PIDGPRRLNVAMTRAQRFCAIVGDWYTL 713
>gi|413949646|gb|AFW82295.1| hypothetical protein ZEAMMB73_646273 [Zea mays]
Length = 626
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 83/113 (73%)
Query: 519 IDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVR 578
+ ++ KLSIG+V PY+AQV AIQEK+G + F+VKV +DGFQG EED+IIIS VR
Sbjct: 342 LSTRSKLSIGVVCPYTAQVRAIQEKVGKACGRNDYFSVKVKFVDGFQGAEEDIIIISIVR 401
Query: 579 SNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
SN G++GFLSN +R NVALTRA+HCLWI+GN TL SVW+ +V D R
Sbjct: 402 SNGAGTVGFLSNLQRTNVALTRAKHCLWIVGNGTTLFNSNSVWQKIVKDTRDR 454
>gi|15679629|ref|NP_276746.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622761|gb|AAB86107.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 642
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 160/293 (54%), Gaps = 40/293 (13%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIP---LQLSGIKHAVLFG 397
L+ + + LST SS+ A+E ++ L D A + S++TIP + L+ +L G
Sbjct: 340 LRESQVVLSTNSSA------ALEYIDGLRFDVAIVDEASQATIPSILIPLARAPRFILAG 393
Query: 398 DECQLPAMVESKVSNEACFGRSLFERL--SYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
D QLP + S+ ++E R+LFE L + G S+ +L+ QYRMHP+I FPN FY+
Sbjct: 394 DHRQLPPTILSRDASE--LERTLFEELIKRHPGRSR-MLNCQYRMHPAIMEFPNREFYDG 450
Query: 456 KIRDSSTVRKRSYEKRFLHGPMYG---------PYSFINVFG--GREEFIEHSC--RNMV 502
+IR ++ S P P FI+ G G E ++ S +N +
Sbjct: 451 RIRAHPSLEDISIRDIIEDVPDSDICQKLADPDPVLFIDTSGLDGCERRLKGSTSIQNPL 510
Query: 503 EVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSID 562
E + + I +L + + +E IGI++PY QV I S+ V+V S+D
Sbjct: 511 EADLAVIISRSLMRMGVKPEE---IGIITPYDDQVDLI----------SSMIDVEVNSVD 557
Query: 563 GFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
GFQG E+D+IIIS VRSN GSIGFL + +R+NV+LTRAR L I+G++RTL+
Sbjct: 558 GFQGREKDVIIISMVRSNRNGSIGFLKDLRRLNVSLTRARRKLIIIGDSRTLS 610
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 139/260 (53%), Gaps = 13/260 (5%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
N +++DEA+Q E E+ IP+ + G VL GD+ QL +V S V A + SLFERL
Sbjct: 588 FNSVLVDEASQATECETLIPI-VHGAHRVVLVGDQKQLQPVVLSAVCKRAGYDVSLFERL 646
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G LL +QYRMHP++S F N FYE ++ D R K F + P F
Sbjct: 647 IDSGMEPQLLCVQYRMHPALSVFSNHKFYEGRLEDGIGEANRPLIK-FCYPNTKVPLLFW 705
Query: 485 NVFGGREEF--IEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
NV GRE S N+ E + V+ I+ L + I K+ IG+++ Y+ Q V ++
Sbjct: 706 NV-KGRESIGNTGSSFLNVQEATAVVNIVKELMQCGIKEKK---IGVITSYTGQKVLLKN 761
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
L + V+ S++ FQG E D I++S VRSN IGFL + KR+NVALTRAR
Sbjct: 762 LLQQSRLGK----VECASVNTFQGREMDYIVLSCVRSNPMRIIGFLKDPKRLNVALTRAR 817
Query: 603 HCLWILGNARTLTRKKSVWE 622
+ I+G+ L + +W+
Sbjct: 818 FGMIIVGDTSVL-KYNDLWK 836
>gi|405124191|gb|AFR98953.1| helicase sen1 [Cryptococcus neoformans var. grubii H99]
Length = 2142
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
LK A + +T S + ++A ++IDEAAQ E IPL+ G K ++ GD
Sbjct: 1701 LKDADIICATLSGAGH-DTLAAHTFETVIIDEAAQAIEMSCLIPLKY-GCKRCIMVGDPN 1758
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRD 459
QLP S + + + +SLF R++ S LLSIQYRMHP IS P+ FY +++D
Sbjct: 1759 QLPPTTFSMSAEKLQYNKSLFVRMAKRDVSHVQLLSIQYRMHPFISELPSKVFYHGQLKD 1818
Query: 460 SSTVRKRS---YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYK 516
++ K++ + +R + +GPY F N+ G E S +N E +++ L
Sbjct: 1819 GPSMAKKTAAIWHQRNI----FGPYRFFNI-EGTEMKTGTSTKNPAEALAAVELYRRL-S 1872
Query: 517 AWIDSKEKLS--IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIII 574
A ++ L+ IG++S Y Q+ ++ K + ++ V+ ++DGFQG E+D+II+
Sbjct: 1873 ADFGTRVNLAMRIGVISMYREQLWELKRKFTEAFGSTILELVEFNTVDGFQGQEKDIIIL 1932
Query: 575 STVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
S R+NVALTRA+ L+I GN TL R W+ +V DA R F
Sbjct: 1933 S-----------------RMNVALTRAKSSLFIFGNGSTLERSDERWKIIVQDARDRGFF 1975
Query: 635 FNAD 638
N D
Sbjct: 1976 INYD 1979
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
+LN+ QA+AVL L LI GPPGTGKTKT+S L+ +
Sbjct: 1492 SLNEPQAKAVLGAL------EVKGFALIQGPPGTGKTKTISGLVGKWMSERRIPISVDGQ 1545
Query: 76 --MKFRTLVCTPTNVAIKELAARVV 98
+K + LVC P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|440298360|gb|ELP90998.1| suppressor with morphological effect on genitalia family protein
(smg-2), partial [Entamoeba invadens IP1]
Length = 309
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 139/252 (55%), Gaps = 22/252 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+VIDE+AQ E E+ + ++ AVL GD QLP V S + +S+FERL
Sbjct: 20 VVIDESAQSIEPETFGAMIR--VQKAVLIGDVQQLPPTVLSTEGKKGGLEKSMFERLLLN 77
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK--RFLHGPMYGPYSFIN 485
LL+ QYRMHP I+ FPN FY K+ + + RS ++ L P++ P F++
Sbjct: 78 KVPYALLTTQYRMHPQIAKFPNDNFYAGKLLNGVSEDDRSDQRLQGILPNPLF-PVMFVH 136
Query: 486 VFGGREEFIEHSCR---NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
G +EF S + N E VV ++ + I E IGI+SPYS Q +E
Sbjct: 137 CKG--DEFYGVSGKSYGNSQEKEVVQYLIDLFNRKGIKDNE---IGIISPYSTQ----RE 187
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
LG A ++V S+DGFQG E++ IIIS VRSN IGFLS+ +R+NVALTRA+
Sbjct: 188 LLGV-----AHKTIEVASVDGFQGNEKEFIIISCVRSNEQQGIGFLSDHRRLNVALTRAK 242
Query: 603 HCLWILGNARTL 614
L I+G+A TL
Sbjct: 243 RGLVIVGDAHTL 254
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 37/298 (12%)
Query: 367 FLVIDEAAQLKESESTIPLQ--LSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ +DEAAQ E + IPL L+G VL GD QLP V S+ + RSL ERL
Sbjct: 694 YAFVDEAAQCVEPHTLIPLTKALAG----VLVGDTKQLPPTVVSRDAVAIGLQRSLIERL 749
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
LG +LL QYRMHP ++ F + FY+ +++ +R P +F+
Sbjct: 750 ELLGVEPYLLEEQYRMHPGLAAFSSVRFYDRRLKSVPKPSERVAPNGVNWPSTMVPLAFV 809
Query: 485 NVFGGREEFIE---HSCRNMVE----VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQV 537
V G EE +S N+ E V VV K+LL+ D K IGI++PY+AQV
Sbjct: 810 EVKG--EEMRAPDGNSIFNVQEAEECVRVVQKLLLSG-----DVKNAGDIGIIAPYAAQV 862
Query: 538 VAIQEKLGSKYVN----------------SAGFAVKVMSIDGFQGGEEDLIIISTVRSNN 581
AI E+ K + SA +++ S+DGFQG E+++I++ TVR+N
Sbjct: 863 RAISEEWNRKVTSDVKLKNTSVVEADNPESAKDELEIRSVDGFQGREKEVIVLCTVRNNR 922
Query: 582 GGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+GF+++ +R+NVA+TRA+ L +LG+ TL+ + +W+ + + +C + D
Sbjct: 923 QNQLGFVADPRRLNVAITRAKRGLIVLGHRDTLSTDQ-LWQKWLQFVDKYECEVESAD 979
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 183/353 (51%), Gaps = 68/353 (19%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L +++ SE H ++KL E +++D++ S + + LST S++ +
Sbjct: 333 LENEKISEIHDKIKKL-------------ENKIVKDIINS-----SDIILSTNSTA-AIE 373
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIP---LQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
+A N +++DEA+Q +TIP + LS + +L GD QLP + +S +A
Sbjct: 374 EIARTKFNVVIVDEASQ-----ATIPSILIPLSKARRFILAGDHKQLPPTI---ISKKAH 425
Query: 416 F-GRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR--------- 464
F ++LFE L +K LL++QYRM+ + FPNS FY ++ S+V
Sbjct: 426 FLEKTLFEELIKKYPNKASLLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINLDEIID 485
Query: 465 -------KRSYEKRFLHGPMYGPYSFI---NVFGGREEFIE--HSCRNMVEVSVVMKILL 512
K S ++ LH + P FI N+ E+ ++ S N E ++ I
Sbjct: 486 SEELSRLKESDVEKQLHNNL-KPLLFIDTSNLKNNEEKHLKDSKSIINQSEAAIATSIAK 544
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLI 572
I+ K+ IGI+SPY+ QV IQ+K+ ++V S+DGFQG E+++I
Sbjct: 545 FYLGTGINPKD---IGIISPYADQVNLIQDKI----------PIEVKSVDGFQGREKEII 591
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
IISTVRSN G+IGFL + +R+NVA+TRA+ L ++GN TL + S + L+
Sbjct: 592 IISTVRSNKNGNIGFLKDLRRLNVAITRAKRKLIVIGNKNTL-KGNSTYSKLI 643
>gi|334311942|ref|XP_001370697.2| PREDICTED: probable helicase senataxin [Monodelphis domestica]
Length = 2675
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 150/286 (52%), Gaps = 33/286 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ P + +L GD QLP V S + E + +S+ R
Sbjct: 2162 PFSCVIVDEAGQSCEIETLTPF-IHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMAR 2220
Query: 424 LSYLGYSKHL----------------LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
L KHL L++QYRMHP I FP+SY Y ++ + +
Sbjct: 2221 LY-----KHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIYNRTLK----TNRLT 2271
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
E R + PY +V G E S N+ E+ +VM+ L+ L K +I
Sbjct: 2272 EESRCTSDWPFQPYLVFDVGDGSERRENDSYVNVQEIKLVME-LIKLIKDRRKDITMRNI 2330
Query: 528 GIVSPYSAQVVAIQEKLGSKY-VNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSI 585
GI++ Y AQ + IQ++L ++ N G +V ++D FQG ++D +I++ VR+N + GSI
Sbjct: 2331 GIITHYKAQKMMIQQELDKEFERNRPG---EVDTVDAFQGRQKDCVIVTCVRANASQGSI 2387
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2388 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2432
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQMK----------------FRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL +L K R LVC P+N A+ E
Sbjct: 1944 AKICLIHGPPGTGKSKTIVGLLYRILTEKPKRGDSDENLNAKIKRNRVLVCAPSNAAVDE 2003
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2004 LMKKIILEFKEK----CQDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2053
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2054 NHRMKK 2059
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 146/262 (55%), Gaps = 23/262 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E + IPL + G +L GD QL + K +A F +SLFERL L
Sbjct: 432 VLVDEAVQSTEPLNIIPL-VYGCTKLILVGDHKQLGPTILCKKVAKAGFKQSLFERLILL 490
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G S ++LS+QYRMH + +P+ FY +++ + R + G P++F
Sbjct: 491 GISPYILSLQYRMHADLCEWPSETFYNGELQTGN---------RLFYKLNIGIPHNFFYA 541
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G+EE S N +E I+ +L+K+ I K+ IG+++PY Q I ++
Sbjct: 542 CYGKEEVSTSGTSFVNPMEALYCESIIRHLFKSGITEKQ---IGVITPYEGQRSHILNRI 598
Query: 545 -GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
GS+ N +++ ++DGFQG E+D II+S VRSN IGF+ + +R+NVALTRA+H
Sbjct: 599 FGSEPGN-----LEISNVDGFQGREKDYIIVSLVRSNLYQGIGFVGDKRRMNVALTRAKH 653
Query: 604 CLWILGNARTLTRKKSVWEALV 625
L I+GN T+ K W++L+
Sbjct: 654 GLIIIGNPNTMI-KHDAWKSLL 674
>gi|406606431|emb|CCH42205.1| Regulator of nonsense transcripts 1 [Wickerhamomyces ciferrii]
Length = 357
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 171/338 (50%), Gaps = 55/338 (16%)
Query: 336 LKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVL 395
L S + +A + L+T+ ++ +E + +++DE+ Q E+ S IPL + V
Sbjct: 26 LISKLVPKAEVVLATSVTAGGYQVKELEEIPVVIMDESTQSTEACSLIPLSAYEAQKFVF 85
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFY 453
GDE QL S S +SLFER+ G K H+L++QYRMHP IS FP FY
Sbjct: 86 VGDEKQL-----SSFSEIPYLEQSLFERILKNGTYKNPHMLNVQYRMHPMISQFPIKRFY 140
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG--REEFIEHSCR----------NM 501
+ + D T +R++E P +FI+ +G +E + +S + N
Sbjct: 141 KGLLTDGVTEEERTFENT-------KPLTFID-YGKVHQESKVMNSSKSDVNRGYTFQNK 192
Query: 502 VEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ--VVA---------------IQEKL 544
E ++++ L +L + + +IGIV+PYSAQ +VA IQE++
Sbjct: 193 GEAQMILRTLKDL--VIMKDVSRRNIGIVTPYSAQRNLVAEMVQRDHLINPKNERIQEEI 250
Query: 545 GSKYVNSAG---------FAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
+ S+ + V SID FQG E+D II S VRSN +IGF+ +++R+N
Sbjct: 251 DDDFSISSNKRPASIKTICGIMVSSIDAFQGREKDFIIFSCVRSNPQNNIGFVKDARRLN 310
Query: 596 VALTRARHCLWILGNARTLTRKKSVWEALVHDANARQC 633
VALTRA++ L ++GN + ++W+ L+H ++ C
Sbjct: 311 VALTRAKYGLILVGNKSCMQNGDTLWKDLIHHFESKNC 348
>gi|168060609|ref|XP_001782287.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666217|gb|EDQ52877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1117
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 135/231 (58%), Gaps = 19/231 (8%)
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF----- 472
RSLFER G +L+ QYRMHPSI +P+ FY ++DS VR S + F
Sbjct: 830 RSLFERFEEGGVPVLVLNTQYRMHPSICLYPSRQFYGGALKDS--VRVSSMQSIFTDEVC 887
Query: 473 -----LHGPMY--GPYSFINVFGG--REEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKE 523
+ G + G Y F++V G REE + HS N E VV ++ ++ K I S
Sbjct: 888 VGGIIIRGCRFKLGHYCFMDVGWGTEREELVGHSRANFEEALVVCNVVESVVKGLI-SGL 946
Query: 524 KLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGG 583
K ++G+++PY AQ I+ +L + ++S A +V ++DGFQG E+D+I++S VR+
Sbjct: 947 KPNVGVITPYIAQRGVIEGQLARRGIDST--ACEVNTVDGFQGREKDVIVLSCVRAMADR 1004
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+GF+S+ +R+NVALTRA++ L ++G+A TL + W +L+ DA R C+
Sbjct: 1005 GLGFVSDERRMNVALTRAKYSLIVVGHAETLQKWSPTWGSLIDDAQQRGCY 1055
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL--QMKFRTLVCTP 85
LN SQ ++ SCL MR QL+ GPPGTGKT T+ ++ LL + R LVC P
Sbjct: 624 LNTSQLLSI-SCLLHMR----QGFQLVQGPPGTGKTSTIIGMVSSLLIEEPSVRILVCAP 678
Query: 86 TNVAIKELAARVV-KLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRV 144
+N A+ E+AAR+V +++ +S + + P+ ++ ++R+ + V I LD
Sbjct: 679 SNAALDEVAARLVNRMLDKSGD------FYSPVDGAIVRFGSKRV-IHPLVHSISLDTLC 731
Query: 145 KRLADCFAPLTGWSHCFASMVDFLDN 170
R+ SH S VD LD
Sbjct: 732 ARIPSS-------SHRSKSWVDLLDG 750
>gi|156087819|ref|XP_001611316.1| regulator of nonsense transcripts [Babesia bovis T2Bo]
gi|154798570|gb|EDO07748.1| regulator of nonsense transcripts, putative [Babesia bovis]
Length = 1086
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 148/265 (55%), Gaps = 18/265 (6%)
Query: 367 FLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL-PAMVESKVSNEACFGRSLFERLS 425
+++IDE AQ E + IP+ G + VL GD QL P ++ ++ ++E SL E L
Sbjct: 787 YVIIDECAQSIEPSNLIPIG-KGCRQLVLIGDHMQLRPTIISTEAASEG-LSSSLLENLV 844
Query: 426 YLGYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF-LHGPMYGPYSF 483
K HLL +Q RMHPSIS FPN+ FY+ I D+ R+ K F P Y +F
Sbjct: 845 NANVGKVHLLDVQRRMHPSISEFPNNQFYKGLITDAIEENSRNPIKGFEWPSPAYN-IAF 903
Query: 484 INVFGGR-----EEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKE--KLSIGIVSPYSAQ 536
I+ G E + S N +EV +I+L L K+++D+ + + IGI++ Y AQ
Sbjct: 904 IDASSGGPNGQFESVVGTSRSNALEV----EIILMLLKSFLDAGDVRESDIGILTAYDAQ 959
Query: 537 VVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
++ K+ + +A A+++ S+DGFQG E++LI+ S VRSNN IGFL + +R+NV
Sbjct: 960 KWQLRRKVNQMFGINAQ-AIEIDSVDGFQGKEKELILFSGVRSNNHKDIGFLKDPRRMNV 1018
Query: 597 ALTRARHCLWILGNARTLTRKKSVW 621
LTRAR L ++ + T+ S W
Sbjct: 1019 MLTRARRGLIVVADKFTIMNDISNW 1043
>gi|159479006|ref|XP_001697589.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274199|gb|EDO99982.1| predicted protein [Chlamydomonas reinhardtii]
Length = 3730
Score = 139 bits (351), Expect = 7e-30, Method: Composition-based stats.
Identities = 123/479 (25%), Positives = 211/479 (44%), Gaps = 58/479 (12%)
Query: 339 FCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSG---IKHAVL 395
+CL +A +T ++ A P+ V+DEAAQL E+ +PL L G + VL
Sbjct: 729 YCLSKARAIFATVAAVGSARMAAAPPVEAAVVDEAAQLPEAHLAVPLALCGGGSLALLVL 788
Query: 396 FGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYEN 455
GD QLPA V S++ LL QYRMHP+IS +P FY
Sbjct: 789 VGDPQQLPATVLSQL----------------------LLDTQYRMHPAISTWPRDRFYGG 826
Query: 456 KIRDSSTVRKRSYEK-RFLHGPMYGPYSFINVFGG---REEFIEHSCRNMVEVSVVMKIL 511
++ D V +Y L G +GP ++V G RE + + +
Sbjct: 827 RVVDGPNVTAPAYAGVAQLLGLAWGPLVVLDVSSGAEEREAYNDGTGEEDAGGGGGGGGG 886
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYV------------NSAGFAVKVM 559
+W + E V + Q + G +V V
Sbjct: 887 GGKGTSWRNPHEAAVAAAVVRQADAEAEAQAAAEAGGAEAGTGGPPAAPSGGGGVSVAVR 946
Query: 560 SIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKS 619
S+DGFQG E+D+I++S VR+N G +GF +++R+NVA TRARH L +L +A TL +
Sbjct: 947 SVDGFQGQEKDVIVLSLVRANTAGYVGFTDDARRLNVAATRARHGLVVLVHAATLRHRSE 1006
Query: 620 VWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELDELLNPESRLFRSQRWKVNFSE 679
+ A + DA R +A D + A AV+ E ++ + + WKV +++
Sbjct: 1007 LLRAFLEDARQRGVLLSASDQPQMAPAFRAVQAEQRRCAAIVRGRAP-WDEAPWKVIYTD 1065
Query: 680 NFLKSFRKLTSDPTKKSVIHLLLKLSNGWRPKKR-NVDSVCGSSLHIIKQFKVEG--FYI 736
+ S +L + +I +L+L++G P+++ + +V +++ +++G +
Sbjct: 1066 RYCSSCMQLQPKAWRVRMIDAVLELAHGRFPRRQVPLAAVRPELAALLRGQRLQGGRLVL 1125
Query: 737 ICTIDIVKESQ--------YFQVLKVWDILPL-----EDVPKVVARLDNIYVKYTAEFI 782
+ ++ + + Q + Q L++WD+L L ++ V R++ YT E +
Sbjct: 1126 LWSVRLERHQQQPVRQGGRWVQALQLWDVLRLLPGQDAELGAAVRRVEAEMATYTDEHL 1184
Score = 63.5 bits (153), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 21/129 (16%)
Query: 48 KATIQLIWGPPGTGKTKTVSMLLVILLQM---KFRTLVCTPTNVAIKELAARVVKLV--- 101
+A +QL+ GPPGTGKT T + L +L + L PTN A+ E A+R VKLV
Sbjct: 377 RAELQLVQGPPGTGKTSTTAAQLSVLAAVGRPGTALLATAPTNAAVGETASRFVKLVAAG 436
Query: 102 ------KESVERDCRDALFF--PL--GDILLLGNNERLKVDSGVE--EIYLDYRVKRLAD 149
E+ R L PL GDI+LLG+ +RL + E ++L R KRL+
Sbjct: 437 GQQFADSEAAAELRRHGLRVEPPLLPGDIVLLGSGDRLDLTGSPELLAVFLQARAKRLS- 495
Query: 150 CFAPLTGWS 158
A L WS
Sbjct: 496 --AALATWS 502
>gi|123478695|ref|XP_001322509.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121905356|gb|EAY10286.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 803
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 151/277 (54%), Gaps = 11/277 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++ DE+ Q+ + + I G + +L GD QL +V SK + ++ + SL +RL+ L
Sbjct: 498 VIFDESGQVLDPDIVIG-ATRGAQQMILVGDHRQLGPVVLSKKAIKSRYDVSLMKRLTAL 556
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGP-MYGPYSFINV 486
+L++QYRMHPSIS FP+ FY ++D + R + + L P P F NV
Sbjct: 557 NVRPSVLTMQYRMHPSISSFPSEAFYMKLVKDGLSASDRKWPRPILPWPDKESPVMFWNV 616
Query: 487 FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
REE + + N+ E + +I+ + + + S + IGI++PY+ Q + + + L
Sbjct: 617 -DSREENYDSAISYVNVKEAEAISQIVDMMCRNGVKSGD--DIGIITPYTGQQMYLMDSL 673
Query: 545 GS--KYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
S KY N +++ S+D FQG E++ II S VR+N+ IGF+ + +R+ V+LTRA
Sbjct: 674 PSLCKYANDDIIQEIEIASVDAFQGREKNFIIFSCVRANDMNDIGFMRDQRRLCVSLTRA 733
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
++ L I+GNA T R S+W L+ + R F +
Sbjct: 734 KYGLVIVGNAATFAR-SSIWCKLIQNLMNRGLFVEGE 769
>gi|395506275|ref|XP_003757460.1| PREDICTED: probable helicase senataxin [Sarcophilus harrisii]
Length = 2753
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 37/288 (12%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ P + +L GD QLP V S + E + +S+ R
Sbjct: 2238 PFSCVIVDEAGQSCEIETLTPF-IHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMAR 2296
Query: 424 LSYLGYSKHL----------------LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
L KHL L++QYRMHP I FP+SY Y ++ + +
Sbjct: 2297 LY-----KHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIYNRTLK----TNRLT 2347
Query: 468 YEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
E R + PY +V G E S N+ E+ +VM+I+ K D ++ ++I
Sbjct: 2348 EESRCTSDWPFQPYLVFDVGDGSERREHDSYVNIQEIKLVMEII----KLIKDRRKDITI 2403
Query: 528 ---GIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGG 583
GI++ Y AQ + IQ++L ++ + V ++D FQG ++D II++ VR+N + G
Sbjct: 2404 RNIGIITHYKAQKMMIQQELDKEFEKTRPGEVD--TVDAFQGRQKDCIIVTCVRANASQG 2461
Query: 584 SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
SIGFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2462 SIGFLASLQRMNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2508
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKT-VSMLLVIL------------LQMKF---RTLVCTPTNVAIKE 92
A I LI GPPGTGK++T V +L IL L KF R LVC P+N A+ E
Sbjct: 2018 AKICLIHGPPGTGKSRTIVGLLYRILTEKPKKGDSDENLNAKFKRNRVLVCAPSNAAVDE 2077
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2078 LMKKIILEFKEK----CQDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2127
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2128 NHRMKK 2133
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 145/281 (51%), Gaps = 28/281 (9%)
Query: 360 VAMEPLNFLVI--DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
A+ ++F V+ DEA+ E S IPL + G +H L GD QLP ++ S+ + G
Sbjct: 679 TALNVIDFPVVFLDEASMSTEPASLIPL-MKGSQHMTLIGDHKQLPPVITSREAIAGGLG 737
Query: 418 RSLFERLSYLGYSKH-LLSIQYRMHPSISCFPNSYFYENKIRD-----SSTVRKRSYEKR 471
SLFERL+ G +L +QYRMHP IS FP++ FY +RD S V +
Sbjct: 738 ISLFERLTEEGVVPSIMLDLQYRMHPQISKFPSAEFYNFALRDGMLDSSGGVPAQLRPPT 797
Query: 472 FLH---GPMYG--PYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS 526
H P G P G E + S N + +V ++ +L D + +
Sbjct: 798 SAHLQMNPQTGDRPSVIFLDHQGLESPKDRSKVNYTDADIVCSVIEDLLIQNPDLRGE-D 856
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFA-------------VKVMSIDGFQGGEEDLII 573
IG+++PY AQ+ + L + + A F + + ++DGF+G E+D+II
Sbjct: 857 IGVIAPYVAQIRLLTRLLTTDAKSQARFQAALGDQRAMQLPQIDIKTVDGFEGREKDVII 916
Query: 574 ISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
STVRSN+ G +GFL++ +R+NV LTRA+ L+++GN TL
Sbjct: 917 FSTVRSNSSGHVGFLADRRRLNVGLTRAKRGLFVVGNLNTL 957
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 12/70 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT----LVC 83
LN+SQ +AV + + + L+ GPPGTGKTKT+ + V LL+ F LVC
Sbjct: 480 LNESQTRAVAMMVGER-------VSLVQGPPGTGKTKTI-IEAVKLLKRHFAVPHPILVC 531
Query: 84 TPTNVAIKEL 93
T TNVA+ L
Sbjct: 532 TFTNVAVDNL 541
>gi|156838553|ref|XP_001642980.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113564|gb|EDO15122.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 1115
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 179/379 (47%), Gaps = 83/379 (21%)
Query: 311 LRKLQS------SFNELNLPSAVEKDLLEDLLKSFCLKRASLFLST--ASSSYMLHSVAM 362
LRKL+S S N++N S + + + + +A + +T A+ L S+
Sbjct: 753 LRKLRSGRINDISKNQINKLSTQQTTIADRYVS-----QAQIIFTTNIAAGGRQLKSIKE 807
Query: 363 EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFE 422
P+ +++DE+ Q E+ + +PL L G++ V GDE QL S SN SLFE
Sbjct: 808 LPV--VIMDESTQSSEAATLVPLSLPGLRTFVFVGDEKQL-----SSFSNVPQLEMSLFE 860
Query: 423 RLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGP 480
R+ G K H+L QYRMHPSIS FP FY +++D T++ + + G Y P
Sbjct: 861 RVLLNGSYKKPHMLDTQYRMHPSISKFPIKAFYNGELKDGVTIKDKEFP-----GIKY-P 914
Query: 481 YSFINVFGGREEFIEHSCR--------NMVEVSVVMKILLNLYKAWIDSK-EKLSIGIVS 531
F N GRE + + R N+ E ++KI LYK +D ++ IGI++
Sbjct: 915 LFFYNCNKGREGKVFNKVRGSAGFTYNNISEAREIVKI---LYKLILDKNVQRDEIGIIT 971
Query: 532 PYSAQ-----------VVAIQEK------------LGSKY---------VNSAGF--AVK 557
PYSAQ V EK L SK VN+ +
Sbjct: 972 PYSAQRDLLSNLLVNDSVINPEKVEMFQDFDEIDLLNSKASGNTLEGPKVNTINIINGIF 1031
Query: 558 VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK 617
V +ID FQG E+ II S VR+N IGF+S+ +R+NVALTRA++ L I+GN + R
Sbjct: 1032 VSTIDSFQGHEKKFIIFSCVRNNPENKIGFVSDKRRMNVALTRAKNGLIIVGNKDVMLRG 1091
Query: 618 KSVWEA---------LVHD 627
W + LVHD
Sbjct: 1092 DKTWGSYIRGLQKVNLVHD 1110
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 170/327 (51%), Gaps = 51/327 (15%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVI--DEAAQLKESESTI 383
AV +++L D++ +A + +T +S S A+ ++F V+ DEA+ E S I
Sbjct: 418 AVRQEMLHDIVA-----QADVVCTTCITSA---SAALRIIDFPVVFLDEASMSTEPASLI 469
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSKHLLSIQYRMHP 442
P+ + G +H L GD QLP ++ S+ + G SLFERL+ G +L +QYRMHP
Sbjct: 470 PI-MKGSRHLALIGDHKQLPPVITSREAQVKGLGISLFERLTEEGDVPSIMLDLQYRMHP 528
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE---FIEHSCR 499
SIS FP+ FY + D + + L P + ++ G+ F++HS +
Sbjct: 529 SISRFPSEEFYNFSLLDGTVDASGNVRSSLL--PPTSSHLVLDPNTGKRPSVVFVDHSGQ 586
Query: 500 ---------NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-------- 542
N E +V+KI+ +L + D K + +IGI++PY AQ+ +
Sbjct: 587 ESSRDRSKVNWEEAGIVVKIVEDLLLSNPDLKGE-NIGIIAPYVAQISLLTRFLHTSTSS 645
Query: 543 ---------------KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
LGS ++++ ++DGF+G E+D+II STVR+N+ G IGF
Sbjct: 646 PSPSTSSPWSTHLLSTLGSHRCMQLP-SIEIKTVDGFEGREKDIIIFSTVRNNDLGQIGF 704
Query: 588 LSNSKRVNVALTRARHCLWILGNARTL 614
L++ +R+NV LTRA+ L+++G+ RTL
Sbjct: 705 LADRRRLNVGLTRAKRGLFVVGSLRTL 731
Score = 44.7 bits (104), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTV---SMLLVILLQMKFRTLVCT 84
LN +Q +AV + +A+ LI GPPGTGKTKT+ LL + Q+ +VCT
Sbjct: 247 LNKTQLRAV-----ALMIGERAS--LIQGPPGTGKTKTIIETVKLLKVHFQVPHPIMVCT 299
Query: 85 PTNVA----IKELAARVVKLVKESVERDCRDALF 114
TNVA ++ LAA VK ++ + +L+
Sbjct: 300 YTNVAVDNLVEGLAASGVKPLRVGYGGKVKKSLY 333
>gi|383416785|gb|AFH31606.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 155/286 (54%), Gaps = 33/286 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKI---RDSSTVRKRSYE 469
L +H L++QYRMHP I FP++Y Y + R + T+R S
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSS-- 2293
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--- 526
P + PY +V G E S N+ E+ +VM+I+ K D ++ +S
Sbjct: 2294 ----DWP-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRN 2344
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSI 585
IGI++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+G GSI
Sbjct: 2345 IGIITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSGQGSI 2402
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1959 AKICLIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2018
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2019 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2068
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2069 NHRMKK 2074
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 142/272 (52%), Gaps = 28/272 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E IPL L G K VL GD QL ++ ++ L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVI-----------------MNIL 655
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY-GPYSFINV 486
G + L +QYRMHP +S FP++ FYE +++ T+++R P+ P F +
Sbjct: 656 GCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQERLLRNVDFPWPVADAPMMFWSN 715
Query: 487 FGGRE-EFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQE 542
G E S N E S V KI+ +KA + + SIGI++PY Q VV +
Sbjct: 716 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPE---SIGIITPYEGQRSYVVQSMQ 772
Query: 543 KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+ G+ + V+V S+D FQG E+D I++S VRSN+ IGFLS+ +R+NVALTRA+
Sbjct: 773 QTGT-FRKEIYKEVEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 831
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANARQCF 634
+ L ILGN + L K +W L+ R C
Sbjct: 832 YGLVILGNPKVLA-KHPLWHYLLLHFKERNCL 862
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMK-FRTLVCTPT 86
LN SQ AV S L + + LI GPPGTGKT T + ++ L ++ + LVC P+
Sbjct: 452 LNGSQINAVKSVLTK-------PLSLIQGPPGTGKTVTSATVIYHLSKINGGQVLVCAPS 504
Query: 87 NVAIKELAARVVK 99
NVA+ +L R+ K
Sbjct: 505 NVAVDQLCERIHK 517
>gi|380810832|gb|AFE77291.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 155/286 (54%), Gaps = 33/286 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKI---RDSSTVRKRSYE 469
L +H L++QYRMHP I FP++Y Y + R + T+R S
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSS-- 2293
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--- 526
P + PY +V G E S N+ E+ +VM+I+ K D ++ +S
Sbjct: 2294 ----DWP-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRN 2344
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSI 585
IGI++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+G GSI
Sbjct: 2345 IGIITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSGQGSI 2402
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1959 AKICLIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2018
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2019 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2068
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2069 NHRMKK 2074
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 173/355 (48%), Gaps = 44/355 (12%)
Query: 294 VGIKYL-LHKRRSEC----------HFVLRKLQSSFNELNLP-------SAVEKDLLEDL 335
G+K L + RR EC H LR+LQ + + +++ D + +
Sbjct: 405 TGLKVLRVMSRRRECGQSDVSFLSLHENLRELQEGRKKKDEGCRDNGRYNSIYNDEVSES 464
Query: 336 LKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
LK L +A + T S M + ++++IDEA Q E S IPL + G K
Sbjct: 465 LKKQLLNQAEVITCTCVTSGQKMFNKFR---FHYVLIDEAVQSTEPLSLIPL-VYGCKKL 520
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFY 453
VL GD QL + K +A F +SLFERL +G ++LSIQYRM + +P+ FY
Sbjct: 521 VLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYVLSIQYRMDTDLCEWPSEMFY 580
Query: 454 ENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKIL 511
++ KRF + P +F V GREE N E I+
Sbjct: 581 NGELLTGG--------KRFCRFDLGIPTNFFYVCYGREEVSASGTSFINQAEALYCESII 632
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL-GSKYVNSAGFAVKVMSIDGFQGGEED 570
+L+K + + IG+++PY Q I ++ G++ N +++ ++DGFQG E+D
Sbjct: 633 RHLFKCGVTENQ---IGVITPYEGQRSYILNRIFGAEPGN-----LEISNVDGFQGREKD 684
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
II+S VRSN IGF+ + +R+NV LTRA+H L I+GN TL K +W L+
Sbjct: 685 FIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPTTLM-KHDMWSNLL 738
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 13 EGVWN--ETFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLL 70
EG+ N F P LN SQ AV + L + + LI GPPGTGKT S ++
Sbjct: 322 EGISNIDHIFSPPNLPKLNTSQETAVRAALGR-------KVTLIQGPPGTGKTLVSSSIV 374
Query: 71 VILLQ-MKFRTLVCTPTNVAIKELAARVVK-----LVKESVERDC--RDALFFPLGDILL 122
++ + LV P+N A+ +L ++ K L S R+C D F L + L
Sbjct: 375 YNFVKHYGGKVLVVAPSNTAVDQLTLKIHKTGLKVLRVMSRRRECGQSDVSFLSLHENLR 434
Query: 123 LGNNERLKVDSGVEE 137
R K D G +
Sbjct: 435 ELQEGRKKKDEGCRD 449
>gi|448678425|ref|ZP_21689432.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
gi|445772412|gb|EMA23457.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
Length = 741
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 153/298 (51%), Gaps = 42/298 (14%)
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
RA + T +S+ L A E + +V+DEA Q + S IPL + AVL GD QL
Sbjct: 449 RADVVAVTNNSAATL---ARE-FDLVVLDEATQSTCAASCIPLVRA--DRAVLAGDHRQL 502
Query: 403 PAMVESKVSNEACFGRSLFERLS-----YLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
P S E+ +G SLFE L Y G L + QYRMH +I+ FPN FY+ +
Sbjct: 503 PPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQLQT-QYRMHRNIAYFPNRRFYDRTL 561
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
R+ V ++ + G NV GGR E + HS N E +V ++ +L A
Sbjct: 562 RNGRAVDPLP-DRPAIEG--------YNV-GGRVETVGHSKANPTEARLVAHLVQDLL-A 610
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ ++E IG+++PYSAQV I+E L + AG V V +ID FQGGE I++S V
Sbjct: 611 DVPAEE---IGVITPYSAQVSRIRETLAKR--TDAGDRVTVDTIDSFQGGERTAIVLSLV 665
Query: 578 RSNNGGSIGFLS----NSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
RSN G++GFL +R+NVALTRA+ I+ + W L +DA+ +
Sbjct: 666 RSNAAGNVGFLGRPVDGPRRLNVALTRAKRYCAIVAD----------WHTLRYDADGK 713
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 11/270 (4%)
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
+E ++ ++IDE+ Q E E I L S +K L GD CQL ++ S + + G +F
Sbjct: 563 LEHIDTVLIDESTQADEPECLICLNNS-VKQLFLVGDHCQLGPILNSSRAKKYGLGLPMF 621
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGP 480
RL LG+ + L QYRMHP +S F + FY+ +++ T +R + ++ P
Sbjct: 622 SRLLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKP 681
Query: 481 YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
FI G+E + + S N EV ++ +I++ + + + IG+++PY AQ
Sbjct: 682 MMFIAA-NGKESYGSNGTSYINDEEVFIIEQIIIKMLGNKVSPSQ---IGVITPYIAQKQ 737
Query: 539 AIQEKLG-SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
AI +L ++ ++ A +++ S+D FQG E+D II STVRSN IGFLS +R+NV
Sbjct: 738 AIISRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNV 797
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
++TRA++ L ++GN TL + +W A +
Sbjct: 798 SITRAKYGLVVVGNPETLM-QNPLWCAYLQ 826
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKF--RTLVCTPTNVAIKELAARV----VKLVK-E 103
+ LI GPPGTGKT T + ++ ++Q + LVC P+N+A+ +L ++ VK+++
Sbjct: 418 LSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGTKITETGVKVIRVY 477
Query: 104 SVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYR 143
S R+ D + L+ E+LK D + +Y +Y+
Sbjct: 478 SKSRETEDESLYDYSLKTLM--EEKLKKDKEMFALYQEYK 515
>gi|219129129|ref|XP_002184749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403858|gb|EEC43808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 268
Score = 138 bits (348), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/249 (34%), Positives = 129/249 (51%), Gaps = 4/249 (1%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
+++DEA Q E +PL + G + VL GD CQLP V S + E G LF R+
Sbjct: 24 VLLDEATQATEPAVLVPL-MRGCRQLVLVGDHCQLPPTVLSTRAEEEGHGVPLFSRMVAC 82
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G ++L QYRMHP I+ FP+ FY +R+ + +R F P +F+ +
Sbjct: 83 GVPPYMLDTQYRMHPCIAMFPSDLFYGGLLRNGVSAPERRPLAGFPWPREEFPVAFLPIQ 142
Query: 488 GGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSK 547
G + + + + L L + + I +V+PY+AQ I+ +
Sbjct: 143 GVEMDDGVSKYNDAEAAAACNAVSLLLQGGQCSASD---IAVVTPYAAQARLIRRMIRRI 199
Query: 548 YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWI 607
+S ++V S+DGFQG E++ ++ S VRSN+ GSIGF S+ +RVNV+ TRAR L +
Sbjct: 200 LPDSGPPFIEVASVDGFQGREKEAVVFSAVRSNDYGSIGFTSDWRRVNVSFTRARRALIV 259
Query: 608 LGNARTLTR 616
+GN TL R
Sbjct: 260 IGNEHTLRR 268
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 149/270 (55%), Gaps = 11/270 (4%)
Query: 362 MEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLF 421
+E ++ ++IDE+ Q E E I L + +K L GD CQL ++ S + + G +F
Sbjct: 563 LEHIDTVLIDESTQADEPECLICLN-NSVKQLFLVGDHCQLGPILNSPRAKKNGLGLPMF 621
Query: 422 ERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGP 480
RL LG+ + L QYRMHP +S F + FY+ +++ T +R + ++ P
Sbjct: 622 SRLLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKP 681
Query: 481 YSFINVFGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
FI G+E + + S N EV ++ +I++ + + + IG+++PY AQ
Sbjct: 682 MMFIAA-NGKESYGSNGTSYLNDEEVFLIEQIIIKMLGNKVSPSQ---IGVITPYIAQKQ 737
Query: 539 AIQEKLG-SKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
AI +L ++ ++ A +++ S+D FQG E+D II STVRSN IGFLS +R+NV
Sbjct: 738 AIISRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNV 797
Query: 597 ALTRARHCLWILGNARTLTRKKSVWEALVH 626
++TRA++ L ++GN TL + +W A +
Sbjct: 798 SITRAKYGLVVVGNPETLM-QNPLWCAYLQ 826
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKF--RTLVCTPTNVAIKELAARV----VKLVK-E 103
+ LI GPPGTGKT T + ++ ++Q + LVC P+N+A+ +L ++ VK+++
Sbjct: 418 LSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGTKITETGVKVIRVY 477
Query: 104 SVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYR 143
S R+ D + L+ E+LK D + +Y +Y+
Sbjct: 478 SKSREIEDESLYDYSLKTLM--EEQLKKDKEMFALYQEYK 515
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii
DSM 2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 181/354 (51%), Gaps = 70/354 (19%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L +++ SE H+ ++KL E +++D++ S + + LST S++ +
Sbjct: 333 LENEKISEIHYKIKKL-------------ENKIVKDIINS-----SDIILSTNSTA-AIE 373
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIP---LQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
+A N +++DEA+Q +TIP + LS + +L GD QLP + +S +A
Sbjct: 374 EIARTKFNVVIVDEASQ-----ATIPSILIPLSKARRFILAGDHKQLPPTI---ISKKAH 425
Query: 416 F-GRSLFERL--SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR-------- 464
F ++LFE L Y S LL++QYRM+ + FPNS FY ++ S+V
Sbjct: 426 FLEKTLFEELIKKYPNKS-SLLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINLDEII 484
Query: 465 --------KRSYEKRFLHGPMYGPYSFI---NVFGGREEFIE--HSCRNMVEVSVVMKIL 511
K S ++ LH + P FI N+ E+ ++ S N E + I
Sbjct: 485 DLEELSRLKESDVEKQLHNNL-KPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIA 543
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
I+ K+ IGI+SPY+ QV IQ+K+ ++V S+DGFQG E+++
Sbjct: 544 KFYLGTGINPKD---IGIISPYADQVNLIQDKI----------PIEVKSVDGFQGREKEI 590
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
IIISTVRSN IGFL + +R+NVA+TRA+ L ++GN TL + S + L+
Sbjct: 591 IIISTVRSNKNKDIGFLKDLRRLNVAITRAKRKLIVIGNKNTL-KGNSTYSKLI 643
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 158/297 (53%), Gaps = 40/297 (13%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFG 397
L RA + +T S++ S ++ LNF ++IDEA Q E IPL + G K ++ G
Sbjct: 232 ILSRAQVVCTTNSTA---GSEVLQNLNFDVVIIDEATQATEPSCLIPL-IKG-KKLIMAG 286
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHL---LSIQYRMHPSISCFPNSYFYE 454
D QLP V S+ + EA +LFERL L Y + + L IQYRM+ I F N FYE
Sbjct: 287 DHKQLPPTVLSQEAQEA-LSYTLFERLLDL-YGEEIYEILRIQYRMNKKIMEFSNKMFYE 344
Query: 455 NK-IRDSS----TVRKRSYEKRFLHGPMYGPYS----------FINVFGG-REEFIEHSC 498
K I D S T++ ++ P P+ FINV G ++ S
Sbjct: 345 GKLIADKSVENHTIKDLINPEKLKEIPE--PFKSVLEPEKVVVFINVRGKEKQRRGSTSF 402
Query: 499 RNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKV 558
N E V +KI+ L K + S+ IG++SPY QV ++E L F V+V
Sbjct: 403 YNEEEAKVAVKIVEYLMKIGLRSEH---IGVISPYEDQVNFLEELLKD-------FEVEV 452
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
++DGFQG E+++IIIS VRSN G IGFL + +R+NVALTRAR L LGN +TL+
Sbjct: 453 KTVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRRLNVALTRARRKLITLGNEKTLS 509
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP 85
+ LN Q +AV L+ + + LI GPPGTGKT T+ + L Q ++ L
Sbjct: 47 TKLNAYQKKAVERALKAEK------VFLIHGPPGTGKTTTLVECIKRLAQEGYKVLATAD 100
Query: 86 TNVAIKELAARVVK 99
+NVA+ L R+V+
Sbjct: 101 SNVAVDNLVERLVR 114
>gi|198467129|ref|XP_001354266.2| GA20398 [Drosophila pseudoobscura pseudoobscura]
gi|198149519|gb|EAL31319.2| GA20398 [Drosophila pseudoobscura pseudoobscura]
Length = 1841
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 43/316 (13%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
+K A++ +T SS L S + + +IDEA Q E + +P++ GI H VL GD
Sbjct: 1519 IKEANIVCTTLSSCVKLGSF-INYFDICLIDEATQCTEPWTLLPMRF-GIPHLVLVGDTQ 1576
Query: 401 QLPAMVESKVSNEACFGRSLFERLSY-------LGYSKHL--------LSIQYRMHPSIS 445
QLPA+V S+ + + +S+F+R+ + + HL L+ QYRMHP I
Sbjct: 1577 QLPAVVLSQKAVDFGLSKSMFDRIQRSLEKQQGVQPNGHLSVHTKLFSLTTQYRMHPEIC 1636
Query: 446 CFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV--FGGREEFIEHSCRNMVE 503
+PN YFYE+++ + + FL P+ PYS IN+ + S +N E
Sbjct: 1637 KWPNRYFYEDRLVNGQGL------DMFLDSPLI-PYSVINLGFTSDTSDPKTRSIKNEEE 1689
Query: 504 VSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVM---S 560
V K+L + + + SK L G++SPYS+Q + + + S +K+M +
Sbjct: 1690 ARFVAKLLAEM-ENHLPSKVYL-YGLISPYSSQCHTLSQVIPSH--------MKIMPPHT 1739
Query: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
+D +QG E D+I+IS R+ GFLSN +R+NVA+TR R CL I GN L + +
Sbjct: 1740 VDAYQGMESDVIVISNARTR---GTGFLSNYQRLNVAVTRPRRCLIICGNFNDL-QSVPM 1795
Query: 621 WEALVHDANARQCFFN 636
W+ L+ DA R +F+
Sbjct: 1796 WKNLLGDARKRGVYFD 1811
>gi|303391232|ref|XP_003073846.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302994|gb|ADM12486.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 779
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 163/331 (49%), Gaps = 26/331 (7%)
Query: 300 LHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLST--ASSSYML 357
LH+ E +K + + N +++ D + LK L +A + T S M
Sbjct: 429 LHENLKELQEGRKKKDECYGDHNRYNSIYNDETNESLKKHLLNQAEVITCTCVTSGQKMF 488
Query: 358 HSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+ ++++IDEA Q E S IPL + G K VL GD QL + K +A F
Sbjct: 489 NKFR---FHYVLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFK 544
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
+SLFERL +G ++LS+QYRM + +P+ FY ++ K F +
Sbjct: 545 QSLFERLISIGVVPYVLSVQYRMDADLCEWPSEMFYNGELLTGG--------KNFCRFDL 596
Query: 478 YGPYSFINVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
P +F V GREE N E I+ +L+K + + IG+++PY
Sbjct: 597 GIPTNFFYVCYGREEVSPSGTSFVNQAEALHCESIIRHLFKCGVTENQ---IGVITPYEG 653
Query: 536 QVVAIQEKL-GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRV 594
Q I ++ G++ N +++ ++DGFQG E+D II+S VRSN IGF+ + +R+
Sbjct: 654 QRSYILNRIFGAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRM 708
Query: 595 NVALTRARHCLWILGNARTLTRKKSVWEALV 625
NV LTRA+H L I+GN TL R +W L+
Sbjct: 709 NVMLTRAKHGLVIIGNPMTLMR-HDMWSNLL 738
>gi|154419279|ref|XP_001582656.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121916893|gb|EAY21670.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 619
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 144/261 (55%), Gaps = 13/261 (4%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++ DE+ Q + + IPL + G + VL GD QL +V S+ + +A + L +RL
Sbjct: 313 VIFDESGQCLDPDLLIPL-VHGTRQCVLVGDHKQLGPVVVSRQAVKARYDIPLMQRLILN 371
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G +L QYRMHP +S FP+ FY ++D T R++ +F+ P P F N+
Sbjct: 372 GIHPLVLRTQYRMHPGLSAFPSEAFYSGMLQDGVTAEHRTWPNQFMKWPNPKLPLIFWNI 431
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
+EEF E S N EV V +L +Y + + + IG+++PY+ Q + + E L
Sbjct: 432 -PSKEEFYESGLSYVNRHEVGAVAVLLEAMYLGGVKASD---IGVITPYAGQQIYMIETL 487
Query: 545 G---SKYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTR 600
+K + + F +++ S+D FQG E++ II+S VR+N+ +GF+ + R+ V+LTR
Sbjct: 488 PALCAKITDKSFFDEIEIASVDAFQGREKNFIILSNVRANDQHDLGFVKDLHRLCVSLTR 547
Query: 601 ARHCLWILGNARTLTRKKSVW 621
AR+ L +LG A T + K VW
Sbjct: 548 ARYGLIVLGCADTFSENK-VW 567
>gi|366990359|ref|XP_003674947.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
gi|342300811|emb|CCC68575.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
Length = 1176
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 52/338 (15%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
+ +A + +T ++ ++ L +++DE+ Q E+ + +PL L GIK+ V GDE
Sbjct: 850 IAQAQILFTTNITAGGRQLKVIKELPVVIMDESTQSSEASTLVPLSLPGIKNFVFVGDEK 909
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIR 458
QL S SN SLFER+ G + ++L QYRMHP IS FP FY K++
Sbjct: 910 QL-----SSFSNIPQLEMSLFERILANGSYREPNMLDTQYRMHPRISDFPIKKFYHGKLK 964
Query: 459 DSSTVRKRSYEKRFLHGPMY------GPYS-FINVFGGREEFIEHSCRNMVEVSVVMKIL 511
D T + ++ + P++ GP +N G F + N+ E ++K++
Sbjct: 965 DGVTAENKMWDG--IQYPLFFYQCDKGPEGRVVNNQNGMRAF---TYNNIFECQEIIKLV 1019
Query: 512 LNLYKAWIDSKEKLS-IGIVSPYSAQ------------VV------AIQEKLGSKYVNSA 552
YK +++ KL IGI++PYS+Q VV +QE ++++NS
Sbjct: 1020 ---YKLYLEKNVKLEDIGIITPYSSQRDLLSQMFVKDAVVNPLGKGMLQETDEAEFLNSR 1076
Query: 553 GFAVK-----------VMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
++ V ++D FQG E++ II S VR+N IGFL + +R+NVALTRA
Sbjct: 1077 RNDIQSHTVNIINGLHVATVDSFQGHEKNFIIFSCVRNNAENKIGFLRDRRRLNVALTRA 1136
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ L ++GN L R +W V ++ F++ D
Sbjct: 1137 KNGLIVVGNKEVLKRGDHLWRDFVQYLEEQEVVFDSLD 1174
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ--MKFRTLVCT 84
TLN+SQ +AV L I +I GPPGTGKT T+ +++ L++ F L
Sbjct: 706 TLNESQRKAVQHVLNNR-------ITVIQGPPGTGKTSTIEEVILQLIENFHSFPILCVA 758
Query: 85 PTNVAIKELAARVV 98
+N+AI +A +++
Sbjct: 759 ASNIAIDNIAEKII 772
>gi|355718810|gb|AES06392.1| senataxin [Mustela putorius furo]
Length = 1702
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 152/294 (51%), Gaps = 30/294 (10%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 1201 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 1259
Query: 424 LSYL--------------GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE 469
L G L++QYRMHP I FP+SY Y ++ S +++
Sbjct: 1260 FYKLLEDSVEHSVVGRLPGLPVLQLTVQYRMHPDICLFPSSYVYNRSLKTS----RQTET 1315
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--- 526
R + PY +V G E S N+ E+ +VM+I+ K D + ++
Sbjct: 1316 SRCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII----KLIKDKRRDVTFRN 1371
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSI 585
IGI++ Y AQ IQ+ L ++ + G A +V ++DGFQG ++D +I++ VR+N GSI
Sbjct: 1372 IGIITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRANTVQGSI 1429
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 1430 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKRGAIIKTCD 1482
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 983 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 1042
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 1043 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 1092
Query: 141 DYRVKR 146
++R+K+
Sbjct: 1093 NHRMKK 1098
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 135/264 (51%), Gaps = 25/264 (9%)
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHP 442
IPL L G K VL GD QL ++ +K + A +SLFERL LG L +QYRMHP
Sbjct: 2 IPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--N 500
+S FP++ FYE +++ T +R + P+ F G+EE N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF------ 554
E S V KI+ +K+ + + IGIV+PY Q I VN F
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQ---IGIVTPYEGQRSYI--------VNYMQFNGSLKK 169
Query: 555 ----AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGN 610
++V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++ + ILGN
Sbjct: 170 DLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGN 229
Query: 611 ARTLTRKKSVWEALVHDANARQCF 634
+ L+ K +W L+ + C
Sbjct: 230 PKVLS-KHPLWHYLLTHYKEKNCL 252
>gi|260949873|ref|XP_002619233.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
gi|238846805|gb|EEQ36269.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
Length = 1128
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 150/316 (47%), Gaps = 50/316 (15%)
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSL 420
++ + +++DEA Q E + IPL + G++ V GD+ QL + S+V N SL
Sbjct: 822 PVQKMPVVIMDEATQSSEPTTLIPLSMPGVEKFVFVGDQKQLSSF--SQVPN---LSLSL 876
Query: 421 FERLSYLGYSK--HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
FER+ G K H+L QYRMHP+IS FP FY ++D T R+ +
Sbjct: 877 FERILLNGSYKTPHMLDTQYRMHPAISAFPRKKFYGGLLKDGITAADRTKPNIPAN---- 932
Query: 479 GPYSFINVFG-GREEFIEHSCR--------NMVEVSVVMKILLNL-YKAWIDSKEKLSIG 528
P F + G RE + R N E+ V K+L L Y+ I+ K+ IG
Sbjct: 933 -PVLFWDTCGKAREGTVRARFREDNGLTYANRGEIDYVEKVLTALIYEKGIERKD---IG 988
Query: 529 IVSPYSAQVVAIQEKL-GSKYVNSAGFAVK------------------------VMSIDG 563
+++PY Q + L + +N V+ + SID
Sbjct: 989 VITPYRGQRDMMSSTLVKNDMINPEKVEVQIEVDRDDFFNESKPITIHMVSDIMIASIDA 1048
Query: 564 FQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
FQG E+D +++S VRSN IGFL++++R+NVALTRA++ L ++G+ L+R +W
Sbjct: 1049 FQGREKDFLVMSCVRSNEQNKIGFLNDARRMNVALTRAKYGLILIGDMECLSRSDPLWNE 1108
Query: 624 LVHDANARQCFFNADD 639
+ A C D+
Sbjct: 1109 YIETLKANNCILTGDN 1124
Score = 48.1 bits (113), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 27 TLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ--MKFRTLVCT 84
T NDSQ A+ S L +I ++ GPPGTGKT T+ +++ LL+ F LV
Sbjct: 660 TFNDSQKVAIQSVLNN-------SITVLQGPPGTGKTSTIYEIILQLLENLNTFPILVVA 712
Query: 85 PTNVAIKELAARVVKLVKESVER 107
+N+AI +A +++ ++S+ R
Sbjct: 713 ASNIAIDNIAEKLLPKHEKSILR 735
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 38/313 (12%)
Query: 331 LLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLS 388
LL+ L++ L A + +T +++S +L + F+ +DEA+ E S +PL
Sbjct: 676 LLKRRLQAEVLHEADVVCTTCLSATSRVLEVID---FPFVFLDEASMATEPLSIVPL-TK 731
Query: 389 GIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY-LGYSKHLLSIQYRMHPSISCF 447
G + GD QLP ++ S+ + + G SLFERL + +L QYRMHPSI+ F
Sbjct: 732 GSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERLIHEQAVPSIMLDTQYRMHPSIAAF 791
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE---FIEH-------- 496
+ FY +++D + V + LH P +F+ G + F+ H
Sbjct: 792 SSEAFYNGQLKDGTVVDGQV--DPVLHPPTT---AFLLPDGDSSKSLTFLNHDFPESPQN 846
Query: 497 -SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
S N E V I+ +L + D K IG+++PYSAQ+ I E L F
Sbjct: 847 RSIANHHEAGRVCDIVADLLASNPDLK-GADIGVIAPYSAQIRLITEFLTIDERRQRAFR 905
Query: 556 -------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
+++ ++DGF+G E+ +II STVRSN GG +GFL + +R+NV LTRA+
Sbjct: 906 QWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNTGGFLGFLGDWRRLNVGLTRAK 965
Query: 603 HCLWILGNARTLT 615
L +LG+ RTL+
Sbjct: 966 RALIMLGSLRTLS 978
Score = 42.4 bits (98), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCT 84
LN SQ +A+ L + + L+ GPPGTGKT+ + + +L Q+ LVC
Sbjct: 534 LNPSQTRAIAMMLSER-------LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCA 586
Query: 85 PTNVAIKEL 93
TNVA+ L
Sbjct: 587 HTNVAVDNL 595
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 135/264 (51%), Gaps = 25/264 (9%)
Query: 383 IPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHP 442
IPL L G K VL GD QL ++ +K + A +SLFERL LG L +QYRMHP
Sbjct: 2 IPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 443 SISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR--N 500
+S FP++ FYE +++ T +R + P+ F G+EE N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF------ 554
E S V KI+ +K+ + + IGIV+PY Q I VN F
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQ---IGIVTPYEGQRSYI--------VNYMQFNGSLKK 169
Query: 555 ----AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGN 610
++V S+D FQG E+D II+S VRSN IGFL++ +R+NVALTRA++ + ILGN
Sbjct: 170 DLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGN 229
Query: 611 ARTLTRKKSVWEALVHDANARQCF 634
+ L+ K +W L+ + C
Sbjct: 230 PKVLS-KHPLWHYLLTHYKEKNCL 252
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 156/290 (53%), Gaps = 28/290 (9%)
Query: 343 RASLFLSTASSSYMLHSVAM-----EPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFG 397
RASLF + L A E + L IDEAAQ E+ I ++ +G + G
Sbjct: 326 RASLFGEARVIACTLTGAANRVLEGEKFSTLFIDEAAQALEAACWIAIRRAG--RVIFAG 383
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSK-HLLSIQYRMHPSISCFPNSYFYENK 456
D CQLP V+S ++ + G +L ER+ LL +QYRM+ I F + +FY +
Sbjct: 384 DHCQLPPTVKSIMALKGGLGITLMERIVKAKPDVVTLLKVQYRMNEQIMRFSSDWFYGGE 443
Query: 457 IRDSSTVRKRS---YEKRFLHGPMYGPYSFINV--FGGREEFI-EHSCR-NMVEVSVVMK 509
++ + + +RS Y++ P +++ G+EEF+ E+ R N E + ++
Sbjct: 444 VQTAPGIERRSILDYDR---------PMMWVDTSEAEGKEEFVGENFGRINRTEAELTLQ 494
Query: 510 ILLNLYKAWIDSK---EKLSIGIVSPYSAQVVAIQEKL-GSKYVNSAGFAVKVMSIDGFQ 565
L ++ + E + +GI+SPY AQV + + + S++ A+ V ++DGFQ
Sbjct: 495 TLQQYFEKIGKQRILDEHIDVGIISPYRAQVQLLHKMIRQSEFFRPYRRAISVNTVDGFQ 554
Query: 566 GGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
G E D+I+IS VR+N+G IGFL + +R+NVA+TRAR L ILG+A T+T
Sbjct: 555 GQERDIIVISLVRNNDGKEIGFLRDLRRMNVAITRARMKLIILGSAATMT 604
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 19 TFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF 78
TFG LN SQ QAV LR + ++ GPPGTGKT T+ + L+ +
Sbjct: 177 TFGAMSLPWLNASQQQAVNEVLR------AKDVAVVHGPPGTGKTTTLVEAIYETLRRES 230
Query: 79 RTLVCTPTNVAIKELAARVV 98
+ LVC +N+A+ +A ++V
Sbjct: 231 QVLVCAQSNMAVDWIAEKLV 250
>gi|301777974|ref|XP_002924403.1| PREDICTED: probable helicase senataxin-like [Ailuropoda melanoleuca]
gi|281354488|gb|EFB30072.1| hypothetical protein PANDA_013736 [Ailuropoda melanoleuca]
Length = 2691
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 153/283 (54%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2188 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2246
Query: 424 L----------SYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +G L L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2247 FYKLLEDNVEHNMIGRLPILQLTVQYRMHPDICLFPSNYVYNRSLK----TNRQTETNRC 2302
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D + ++ IGI
Sbjct: 2303 SSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII----KLIKDKRRDVTFRNIGI 2358
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ + IQ+ L ++ + G A +V ++DGFQG ++D +I++ VR+N GSIGFL
Sbjct: 2359 ITHYKAQKMMIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRANTMQGSIGFL 2416
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2417 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2458
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1970 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2029
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2030 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2079
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2080 NHRMKK 2085
>gi|378756208|gb|EHY66233.1| hypothetical protein NERG_00929 [Nematocida sp. 1 ERTm2]
Length = 788
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 175/336 (52%), Gaps = 50/336 (14%)
Query: 301 HKRRSECHFVLRKLQSSFNELNLPSAVEKDLL---EDLLKSFCL-----KRASLF---LS 349
KR+ E + +R + +L ++KDL+ D KS L ASL LS
Sbjct: 345 RKRKDESNRKIRPKKRIITGNSL--GIQKDLIIDETDYTKSAALIDDAMAGASLVFCTLS 402
Query: 350 TASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESK 409
A+S+ +V+ + + +++DE Q E S IPLQ + ++ VL GD QLP + S+
Sbjct: 403 MAAST----AVSKKEFHVVIVDEVCQSIEPSSIIPLQ-NSVRRLVLVGDPKQLPPTIFSE 457
Query: 410 VSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYE 469
SN+ SLFERL+ + +L QYRMH ISCFPN FY K+ D +
Sbjct: 458 -SNDLSV--SLFERLAET-ITPLILDTQYRMHSDISCFPNKTFYAGKLIDGVVLES---- 509
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGI 529
P + ++ GG ++ S N E+ + +L +I K K SI I
Sbjct: 510 --------IVPMALVDT-GGEQKRNRTSLYNPREIDFIEDLL-----PYIMDKYK-SIAI 554
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLS 589
++PY Q +I+ + K +N + V ++DGFQG E+D II+STVR+N IGFL+
Sbjct: 555 ITPYKEQ--SIRLSVNRKIINR---QITVSTVDGFQGQEKDCIIVSTVRTN---GIGFLN 606
Query: 590 NSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
+ +R+NVALTRA++ + ILG R L + K +W+ LV
Sbjct: 607 DYRRMNVALTRAKYTVIILGCVRLLEKDK-IWKQLV 641
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN++Q AV+ L Q + LI GPPGTGKT+T+S ++ +Q + LVC P+N
Sbjct: 252 LNEAQRNAVIMSLNQ-------PLTLIQGPPGTGKTQTISCMISQFIQRGMQVLVCAPSN 304
Query: 88 VAIKELA 94
+A+ +L
Sbjct: 305 MAVFKLV 311
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 15/266 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRS 419
+E + F L IDEAAQ E+ IP++ + VL GD CQLP MV+S + +A G+S
Sbjct: 370 LEGMKFGTLFIDEAAQALEAACWIPMRR--VTRVVLAGDHCQLPPMVKSIAALKAGLGKS 427
Query: 420 LFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
L ER+ + LL IQYRM+ I F + +FY ++ + R R L P+
Sbjct: 428 LMERIVEHKPDVVTLLKIQYRMNEKIMKFSSDWFYHGEVESAPQTRNRGILD--LDEPIE 485
Query: 479 GPYSFINVFGGR--EEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK---EKLSIGIVS 531
S ++ G E F+ S N E + + L + +K + E + +G++S
Sbjct: 486 WRDSKVDDEEGDSGESFVGESFGRINKAEAQLTLDTLEDYFKKIGKQRILDEHIDVGVIS 545
Query: 532 PYSAQVVAIQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSN 590
PY AQV ++ + + ++ V ++DGFQG E D+I+IS VRSN+ G IGFL++
Sbjct: 546 PYRAQVQYLRRLIRKRESFKPYRHSISVNTVDGFQGQERDIILISLVRSNDQGQIGFLND 605
Query: 591 SKRVNVALTRARHCLWILGNARTLTR 616
+R+NVA+TRAR L ILG+ TL R
Sbjct: 606 LRRMNVAITRARMKLIILGDKATLCR 631
>gi|312071929|ref|XP_003138834.1| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1141
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 154/302 (50%), Gaps = 42/302 (13%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE+ Q E E + + + G++ VL GD CQL ++ K + +A +SLFERL L
Sbjct: 620 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 678
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYG-PYSFINV 486
G L +QYRMHP++S FP++ FYE +++ T +R P+ P F +
Sbjct: 679 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGIDWQWPVPDKPMMFWSC 738
Query: 487 FGGREEFIEH--SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQ 541
+ G+EE S N E + V K+ KA I ++ IGI++PY Q +V
Sbjct: 739 Y-GQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQ---IGIITPYEGQRSYIVQFM 794
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQ-----------------------------GGEEDLI 572
+ G+ + + ++V ++D FQ G E+D+I
Sbjct: 795 QTQGALH-SKLYLEMEVANVDAFQSYQQVGYSTETSRTLPLKVIGRSMRFLHTGREKDII 853
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
I++ VRSN+ IGFL++S+R+NVALTRA+ L I+GNA+ L+R +W L+ +
Sbjct: 854 IVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSR-HPLWNYLLSVFKEKG 912
Query: 633 CF 634
C
Sbjct: 913 CL 914
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 27/134 (20%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILL-QMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L+ Q + LVC P+
Sbjct: 458 LNHSQVHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPS 510
Query: 87 NVAIKELAA-------RVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIY 139
N+A+ +LA +VV+L +S R+ L P + L + +LK G E++
Sbjct: 511 NIAVDQLAEKIHRTGLKVVRLCAKS-----RETLDSP---VAFLALHNQLKALHGAAELH 562
Query: 140 ----LDYRVKRLAD 149
L + LAD
Sbjct: 563 KLQQLKEEIGELAD 576
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 169/327 (51%), Gaps = 55/327 (16%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
+++++L D++KS + S +++ASS+ +VA P+ F +DEA+ E + IP+
Sbjct: 556 GLQQEMLHDIVKSADVV-CSTCITSASSAL---NVADFPVVF--VDEASMSTEPATLIPI 609
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-LLSIQYRMHPSI 444
+ G +H L GD QLP ++ S+ + SLFERL+ G +L IQYRMHP I
Sbjct: 610 -MKGSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRI 668
Query: 445 SCFPNSYFYENKIRDSST-------------------VRKRSYEKRFLHGPMYGPYSFIN 485
S FP+ FY + I+D +T ++ ++E + P F++
Sbjct: 669 SHFPSLEFYNSSIQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSV---IFLD 725
Query: 486 VFG-----GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
FG GR H + + VS+V +LL + IGI++PY AQ+ +
Sbjct: 726 HFGYETMSGRSRVNHHEAQ--IVVSLVEDLLLQNPQL-----RGQDIGIIAPYVAQINLL 778
Query: 541 QEKLGSKYVNSAGFA-------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
L + N F V+V ++DGF+G E+++I+ STVR+N+ G IGF
Sbjct: 779 NRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGF 838
Query: 588 LSNSKRVNVALTRARHCLWILGNARTL 614
L++ +R+NV LTRA+ L+++G RT+
Sbjct: 839 LADRRRLNVGLTRAKRGLFVVGGMRTI 865
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 12/70 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT----LVC 83
LN SQ +A+ + + + I L+ GPPGTGKTKT+ + + LL++ F LVC
Sbjct: 389 LNKSQIKAMATMIGK-------RISLVQGPPGTGKTKTI-VETIKLLKLHFEVSHPILVC 440
Query: 84 TPTNVAIKEL 93
T TNVA+ L
Sbjct: 441 TYTNVAVDNL 450
>gi|291228829|ref|XP_002734380.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2720
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 185/377 (49%), Gaps = 47/377 (12%)
Query: 294 VGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLED---LLKSF---CLKRASLF 347
+ + ++ K S+ +R+ S F +PS+ +KD+ ED L+K L +
Sbjct: 2349 IALHRVIRKAPSKYGNEIRQFDSRFRNAAIPSS-KKDI-EDYKALIKKAEKDALIGCDVI 2406
Query: 348 LSTASSSYMLHSVAMEPLNFL--VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAM 405
L T S + S ++ L L +IDEA E E+ +PL + + VL GD QL +
Sbjct: 2407 LCTCSEAA---SKRLDKLCILQCIIDEAGMCTEPETLVPLVRANPEQVVLIGDHRQLQPI 2463
Query: 406 VESKVSNEACFGRSLFERLSYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVR 464
V +SN+ G SL ER Y + + L IQYRMH +I FPN+ FY+ + + TV
Sbjct: 2464 VTHNLSNQMGLGVSLLER--YCDQNHFIRLKIQYRMHNAICEFPNNQFYDGDLETAETVL 2521
Query: 465 KRSYEKRFLHGPMYGPYSFINVFG---GREEFI--------EHSCRNMVEVSVVMKILLN 513
KRS K + G G VF G+EE + EHS +N+ EV V++I
Sbjct: 2522 KRSQLKTTMDGVWPGGKHVPTVFCHSVGKEESLKVTTDEGSEHSKKNLQEVKDVVRIAKI 2581
Query: 514 LYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
L + +K + I I+S Y AQ I +L K VN V S+ GFQG E+D II
Sbjct: 2582 LTTKYGLAKSR--IQILSQYRAQCHEITGEL--KGVNCQNIGVN--SVIGFQGSEQDYII 2635
Query: 574 ISTVRS----------NNG---GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620
+STVRS G ++GF+++ ++NVALTRAR L I+GNA L R
Sbjct: 2636 LSTVRSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNA-NLLRTDYN 2694
Query: 621 WEALVHDANARQCFFNA 637
W L+ + + C +A
Sbjct: 2695 WRRLLEEYRRKNCCVDA 2711
>gi|145343349|ref|XP_001416310.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576535|gb|ABO94603.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 315
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 145/300 (48%), Gaps = 34/300 (11%)
Query: 361 AMEPLNFLVIDEAAQLKESESTIPLQL---SGIKHAVLFGDECQLPAMVESKVSNEACFG 417
+++P + ++IDEA+Q E + IPLQ G+ ++ GD QL V S+ + A +G
Sbjct: 23 SVQPFDVVIIDEASQAVEPAALIPLQWIKPDGV--IIMVGDSQQLAPTVISRSAQRAYYG 80
Query: 418 RSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPM 477
SLFERLS G L QYRMHP I FP+ FY +R + YE R P
Sbjct: 81 YSLFERLSDCGVPTFTLRDQYRMHPDIVKFPSERFYRGLLRSGAGA---LYEDRV--APW 135
Query: 478 Y-----GPYSFINVFG----GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIG 528
+ GPY F NV G R E S N E + + K ++ +G
Sbjct: 136 HSFSNCGPYQFFNVKGQMNQDRYETGARSFSNSAEAEFASYCYKKIAVSAQLHKSEVKVG 195
Query: 529 IVSPYSAQVVAIQ---EKLGSKYVNSAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGG- 583
I++PY QV ++ E L K +A V ++D QG E D +IIS VR+ G
Sbjct: 196 IITPYLDQVRRLRDFVEPLLKKDGALRTWAHVTYGTVDQVQGQEFDAVIISCVRAYPEGD 255
Query: 584 ---------SIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCF 634
IGFL + +R+NVALTR R+ WI+G A L R ++VW L+ +A R F
Sbjct: 256 KVAPDPPNTDIGFLRDERRLNVALTRGRYSTWIVGYAEVLKR-EAVWLDLIENAKTRNVF 314
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 169/327 (51%), Gaps = 55/327 (16%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
+++++L D++KS + S +++ASS+ +VA P+ F +DEA+ E + IP+
Sbjct: 546 GLQQEMLHDIVKSADVV-CSTCITSASSAL---NVADFPVVF--VDEASMSTEPATLIPI 599
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-LLSIQYRMHPSI 444
+ G +H L GD QLP ++ S+ + SLFERL+ G +L IQYRMHP I
Sbjct: 600 -MKGSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRI 658
Query: 445 SCFPNSYFYENKIRDSST-------------------VRKRSYEKRFLHGPMYGPYSFIN 485
S FP+ FY + I+D +T ++ ++E + P F++
Sbjct: 659 SHFPSLEFYNSSIQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSV---IFLD 715
Query: 486 VFG-----GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAI 540
FG GR H + + VS+V +LL + IGI++PY AQ+ +
Sbjct: 716 HFGYETMSGRSRVNHHEAQ--IVVSLVEDLLLQNPQL-----RGQDIGIIAPYVAQINLL 768
Query: 541 QEKLGSKYVNSAGFA-------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGF 587
L + N F V+V ++DGF+G E+++I+ STVR+N+ G IGF
Sbjct: 769 NRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGF 828
Query: 588 LSNSKRVNVALTRARHCLWILGNARTL 614
L++ +R+NV LTRA+ L+++G RT+
Sbjct: 829 LADRRRLNVGLTRAKRGLFVVGGMRTI 855
Score = 45.8 bits (107), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 12/70 (17%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT----LVC 83
LN SQ +A+ + + + I L+ GPPGTGKTKT+ + + LL++ F LVC
Sbjct: 379 LNKSQIKAMATMIGK-------RISLVQGPPGTGKTKTI-VETIKLLKLHFEVSHPILVC 430
Query: 84 TPTNVAIKEL 93
T TNVA+ L
Sbjct: 431 TYTNVAVDNL 440
>gi|73967706|ref|XP_537811.2| PREDICTED: probable helicase senataxin isoform 1 [Canis lupus
familiaris]
Length = 2693
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2190 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2248
Query: 424 L----------SYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +G L L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2249 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLK----TNRQTETNRC 2304
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D + ++ IGI
Sbjct: 2305 SSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII----KLIKDKRRDVTFRNIGI 2360
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++DGFQG ++D +I++ VR+N GSIGFL
Sbjct: 2361 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFL 2418
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2419 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2460
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1972 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2031
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2032 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2081
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2082 NHRMKK 2087
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 136/264 (51%), Gaps = 30/264 (11%)
Query: 366 NFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL- 424
+ +VIDEA Q E + +PL + VL GD CQLP V S + E SL ERL
Sbjct: 493 DVVVIDEACQSTEPAAWVPLLRA--NKVVLAGDHCQLPPTVLSPEAAERGLSVSLMERLV 550
Query: 425 -SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFL-HGPMYG--- 479
+ + LL++Q+RMH ++ F N FY DS V S L H P
Sbjct: 551 RQFGPGASRLLTVQHRMHAAVMGFSNGEFY-----DSQLVAHESVAAHLLCHLPGVARDP 605
Query: 480 ----PYSFINVFGGR--EEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVS 531
P FI+ G EE E + N E ++ +K + L I + IG+++
Sbjct: 606 LTETPVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQ---IGLIT 662
Query: 532 PYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
PY AQV ++EKL +++ S+DGFQG E++ I++S VRSNN G IGFLS++
Sbjct: 663 PYRAQVRLLREKLADVP------GLEIDSVDGFQGREKEAIVVSLVRSNNEGEIGFLSDT 716
Query: 592 KRVNVALTRARHCLWILGNARTLT 615
+R NVA TRAR L ++G++ TL
Sbjct: 717 RRTNVAFTRARRKLLVIGDSATLA 740
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 26 STLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTP 85
STLN+ Q AV L +I GPPGTGKT TV + L+ + L C P
Sbjct: 313 STLNEPQRDAVAFAL------AAPDFAIIHGPPGTGKTTTVVEFIRKLVARGDKVLACAP 366
Query: 86 TNVAIKEL 93
+N A+ L
Sbjct: 367 SNHAVDNL 374
>gi|440300434|gb|ELP92903.1| hypothetical protein EIN_312750 [Entamoeba invadens IP1]
Length = 1343
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 169/313 (53%), Gaps = 41/313 (13%)
Query: 369 VIDEAAQLKESESTIPLQLSGI---KHAVLFGDECQLPAMVESKVSNEACFG---RSLFE 422
VIDE+AQ E E+ SGI + AVL GD QLP V VSNEA G +S+FE
Sbjct: 660 VIDESAQSIEPET-----FSGIMNVQKAVLIGDIQQLPPTV---VSNEAKNGGLEKSMFE 711
Query: 423 RLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEK-RFLHGPMYGPY 481
RL G + LL+ QYRMHP+IS FPN+ FY K+ D R E+ L P
Sbjct: 712 RLLQNGVAYALLTTQYRMHPAISQFPNNNFYNGKLVDGVDEDDRFDERIEGLFPNNEFPV 771
Query: 482 SFINVFGGREEFIEHSCR---NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F++ G +EF S + N E VV ++ L + I E IGI+SPY+ Q
Sbjct: 772 MFVHCKG--DEFYGTSGKSYGNDEEKKVVKFMVKKLNEKNIRDDE---IGIISPYATQ-- 824
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
+E LG ++ ++V S+DGFQG E+ IIIS VRSN IGF+ + +R+NV+L
Sbjct: 825 --RELLGEEHK-----TIEVSSVDGFQGNEKPFIIISCVRSNENRGIGFVGDHRRLNVSL 877
Query: 599 TRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKAILAVKKELDELD 658
TRA++ L I+G+A TL +++ L+ + CF A K++ + V +E+ ++
Sbjct: 878 TRAKYGLVIIGDAYTLM-INPIFKNLMKFLYDKNCFVVA---KEVEGKVCVVSEEVPTIE 933
Query: 659 ELLNPESRLFRSQ 671
++ +L RSQ
Sbjct: 934 KI-----KLERSQ 941
>gi|237843993|ref|XP_002371294.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
gi|211968958|gb|EEB04154.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
Length = 1419
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 134/265 (50%), Gaps = 9/265 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE AQ E + IPL G ++ VL GD QLP + S + SL ER
Sbjct: 1037 VIIDEGAQAIEPSNLIPL-AHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGS 1095
Query: 428 GYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTV-RKRSYEKRFLHGPMYGPYSFIN 485
G + LL Q RMHPSI+ FPN FY+ KI+ R F + ++
Sbjct: 1096 GIAPIQLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCLVD 1155
Query: 486 V----FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
+ G E S N E+ ++ IL ++ S IG+++PY AQ ++
Sbjct: 1156 ISAAGLSGSETSQGTSKYNAAEIDPIIAILQSVANE--GSVLPSQIGVLTPYDAQKARLR 1213
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ + +V A + ++V S+DGFQG E+DLII S VRSN G IGFL + +R+NV LTRA
Sbjct: 1214 KAINETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRA 1273
Query: 602 RHCLWILGNARTLTRKKSVWEALVH 626
+ + ++G+ TL K+ W +
Sbjct: 1274 KRGVIVVGDQLTLWNDKTNWRPWIQ 1298
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 35/321 (10%)
Query: 332 LEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSG 389
+E ++ + A + +ST S M+ S +E +F VIDE +Q E + IP+ +
Sbjct: 416 MESIVLRQIIASADVVISTNS---MVKSELLEGFHFDVAVIDEGSQQVEPSTLIPIMKAD 472
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL--SYLGYSKHLLSIQYRMHPSISCF 447
+ GD QLP V S+ + E ++LFERL S+ S +L +QYRM+ I F
Sbjct: 473 --KFYIAGDHKQLPPTVTSEEAKE--LEKTLFERLINSHSELSS-MLQVQYRMNEKIMEF 527
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMY--------GPYSF-----INVFGGREEFI 494
PN FYE K+R + V+ + L P P +F IN + + E
Sbjct: 528 PNREFYEGKLRAAEIVKNHTLADFDLKEPEKFKEILNPSEPLAFLDTSDINAYEFQPEG- 586
Query: 495 EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGF 554
S N E + + I L K +D K+ IGI++PY+AQV I++ L K
Sbjct: 587 STSYENYEEAKIAISIAEELCKIGVDKKD---IGIITPYAAQVKLIKQLLLEK-----DL 638
Query: 555 AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTL 614
V+V S+DGFQG E+++IIIS VRSN+ G IGFL + +R+NVA+TR + L +GNA TL
Sbjct: 639 KVEVNSVDGFQGREKEVIIISFVRSNDEGEIGFLKDLRRLNVAITRPKRKLIAIGNAETL 698
Query: 615 TRKKSVWEALVHDANARQCFF 635
+ + V++ + + + F
Sbjct: 699 SNHE-VYKRFIENIKEKGTFL 718
>gi|399216046|emb|CCF72734.1| unnamed protein product [Babesia microti strain RI]
Length = 897
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 40/287 (13%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
L+ L++DEA Q E + I + L+ IK +L GD CQLPA V S+ + + + +SLF+RL
Sbjct: 541 LDALIVDEATQGVELSNLIAISLNSIKRVILVGDPCQLPATVCSRFAIQLGYNQSLFQRL 600
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
G+ +LL +QYRM IS FP+ FY +++D + K + P+ P F
Sbjct: 601 QACGHFINLLDVQYRMCTEISRFPSETFYHGRLKDCDEIHKIRPLVDWYDLPILRPTVFF 660
Query: 485 NVFGGREEFIEHSCRNMVEVSV---VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
++ +E E S N +EV + +++++L + K SIG+++PYSAQV +
Sbjct: 661 SI-ESKEIRAETSYANEIEVELTCQLIEVILGFAEKIPVHKIVESIGVITPYSAQVALLT 719
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSI---------------- 585
+ + ++ V V ++DGFQG E++++I S VR+ G++
Sbjct: 720 DAISKRFKGLG--TVDVSTVDGFQGREKEIVIFSAVRTLGHGNVHQAIINGKMQLLSGDR 777
Query: 586 ------------------GFLSNSKRVNVALTRARHCLWILGNARTL 614
F+S+ +R+NV +TRAR L+I+GN L
Sbjct: 778 LDGFDIKNLTSFSDRMSETFISDQRRINVGITRARTNLFIIGNPHYL 824
>gi|221483749|gb|EEE22061.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1431
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 9/265 (3%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDE AQ E + IPL G ++ VL GD QLP + S + SL ER
Sbjct: 1037 VIIDEGAQAIEPSNLIPL-AHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGS 1095
Query: 428 GYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTV-RKRSYEKRFLHGPMYGPYSFIN 485
G + LL Q RMHPSI+ FPN FY+ KI+ R F + ++
Sbjct: 1096 GIAPIQLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCLVD 1155
Query: 486 V----FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQ 541
+ G E S N E+ ++ IL ++ A S IG+++PY AQ ++
Sbjct: 1156 ISAAGLSGSETSQGTSKYNAAEIDPIIAILQSV--ANEGSVLPSQIGVLTPYDAQKARLR 1213
Query: 542 EKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ + +V A + ++V S+DGFQG E+DLII S VRSN G IGFL + +R+NV LTRA
Sbjct: 1214 KAINETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRA 1273
Query: 602 RHCLWILGNARTLTRKKSVWEALVH 626
+ + ++G+ TL K+ W +
Sbjct: 1274 KRGVIVVGDQLTLWNDKTNWRPWIQ 1298
>gi|255082736|ref|XP_002504354.1| predicted protein [Micromonas sp. RCC299]
gi|226519622|gb|ACO65612.1| predicted protein [Micromonas sp. RCC299]
Length = 1248
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 156/287 (54%), Gaps = 35/287 (12%)
Query: 368 LVIDEAAQLKESESTIPLQLSG------IKHAVLFGDECQLPAMVESK-VSNEACFGRSL 420
++IDEAAQ E+ + IPL+ SG K +L GD QLP ++ S + SL
Sbjct: 774 VIIDEAAQASEAATLIPLRHSGGKEQLEAKRLILVGDHMQLPTTAHAEDPSLRKAYAMSL 833
Query: 421 FERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF-------L 473
F+RL + L++Q+RMH I+ +P YFY ++ +++ S + L
Sbjct: 834 FQRLE-ASHPAVALTVQHRMHAEIAKWPAKYFYRGELENAADSPTESPFNQCGGDGAVCL 892
Query: 474 HGPMY--GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA---WIDSKEKLSIG 528
G ++ PY+F++ G EE + ++++ S KI+ + KA W ++ + S+
Sbjct: 893 DGHLFRLKPYAFLDFHG--EEAVGAQSKSIMNESEA-KIVAAVVKAARKW--ARVEASVA 947
Query: 529 IVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
+++PY Q +L K V+ + +V+V ++DGFQG E D++IIS R+ +GFL
Sbjct: 948 VITPYREQ-----RELIIKNVDDS--SVRVGTVDGFQGQEADIVIISCTRTKQ---LGFL 997
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFF 635
+ +R+NVALTRAR L I+G+A + RK+ W+ LV DA+ R C
Sbjct: 998 EDERRLNVALTRARESLLIVGSADFMRRKRGPWKDLVDDAHERGCLH 1044
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 25 SSTLNDSQAQAVLSCLRQMRCDHKATIQ------LIWGPPGTGKTKTVSMLLVILL--QM 76
+ T N +QA A+ C+R TI+ L+ GPPGTGKT T+ ++ LL
Sbjct: 601 NGTFNANQASAIRRCIRPGVVSGAETIRPCMGVALLHGPPGTGKTNTLVGVVSALLLCSP 660
Query: 77 KFRTLVCTPTNVAIKELAARVVKLVKESVERDCR 110
K R L+C P+N AI ELA R+V + + + CR
Sbjct: 661 KPRILLCAPSNAAIDELALRMVTGLLDKDGKKCR 694
>gi|247494016|ref|NP_932114.2| uncharacterized protein C4orf21 homolog [Mus musculus]
Length = 1863
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGRSLFERLSY 426
+V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E ++LF+RL
Sbjct: 1567 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1626
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G+ LL QYR HP+IS N FYE + + + R+RS +L F NV
Sbjct: 1627 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPT-----LCFYNV 1681
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + E+S N+ E + +K++ +L + ++S IG+++ Y +Q+ I L +
Sbjct: 1682 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 1738
Query: 547 KYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
V AV+V ++D FQG E+++ I+S VR+ +GF+ + KR+NVALTR R L
Sbjct: 1739 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHL 1795
Query: 606 WILGNARTLTRKKSVWEALVHDANARQ 632
I+G+ L RK +W ++ R+
Sbjct: 1796 LIVGSLSCL-RKNRLWGRVIQHCEGRE 1821
>gi|449019515|dbj|BAM82917.1| similar to regulator of nonsense transcripts [Cyanidioschyzon
merolae strain 10D]
Length = 1108
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 55/310 (17%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQL-----SGIKHA-------------VLFGDECQLPAM 405
P ++++DEA+Q E ++ IPL L + H VL GD QLPA
Sbjct: 468 PFQYVIVDEASQAVEPDTLIPLILESFCPTNFPHGDRMEPETIAPSRLVLVGDARQLPAT 527
Query: 406 VESKVSNEACFGRSLFERLSYLGYSKH-----LLSIQYRMHPSISCFPNSYFYENKIRDS 460
V S+++ + + +SLFERLS H L QYRMHPSI+ FP+ +FY +++R +
Sbjct: 528 VRSRLNQASGYDKSLFERLSEAAERVHGAALCWLDEQYRMHPSIAAFPSHFFYGDRLRTA 587
Query: 461 STVRKRSYEKRFLHGPMYGPYSFINVFGG---REEFIEHSCRNMVEVSVVMKILLNLYKA 517
V +R L G + P +++ G RE + S N E + +++ L
Sbjct: 588 CQVCER------LRG-VDSPIELLDMSGDAEHREIRVATSLANPYEAARLVRWLAENQPK 640
Query: 518 WIDS-KEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAV-----------KVMSIDGFQ 565
+ S K+ L++ +++PY AQV ++E L ++ + A +V ++D Q
Sbjct: 641 LVGSRKDPLTVLLITPYRAQVRFLEEALQEFHLWTPAAAASSQPTRSRQEYRVATVDAAQ 700
Query: 566 GGEEDLIIISTVRSNNGG----------SIGFLSNSKRVNVALTRARHCLWILGNARTLT 615
G E DL+I S VRS G SIGF+++++R+NVALTRAR L + G+ TL
Sbjct: 701 GAEADLVIFSPVRSARHGVSACTTPRALSIGFVADTRRLNVALTRARSQLVVGGDLLTLV 760
Query: 616 RKKSVWEALV 625
R V+ A +
Sbjct: 761 RASPVFAAWI 770
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 36/329 (10%)
Query: 331 LLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGI 390
L D+L+ + + + SS SV P+ FL DEA+ E S IPL + G
Sbjct: 750 LHNDMLRDITAQADVICTTCISSVNSALSVIDFPVVFL--DEASMSTEPASLIPL-MRGS 806
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-LLSIQYRMHPSISCFPN 449
+H L GD QLP ++ S ++ G SLFERL+ G +L +QYRMHP++S FP+
Sbjct: 807 QHVALIGDHKQLPPVIVSYEADLKGLGISLFERLTEEGVVPSIMLDVQYRMHPALSYFPS 866
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREE--FIEHSCR-------- 499
FY ++D TV L P+ G R F++H+
Sbjct: 867 LEFYNLSLQDG-TVDSGGNVSPLLLPPLSAHLPVDESTGNRPSIVFMDHAGSETLKDRSR 925
Query: 500 -NMVEVSVVMKILLNLYKAWIDSKEKL---SIGIVSPYSAQVVAIQEKLGSKYVNSAGFA 555
N E ++V I+ +L + E + IGI++PY+AQ+ + L + + FA
Sbjct: 926 VNYDEANIVCSIIEDL----LLRNEHMRGDDIGIIAPYAAQISLLTRLLNTDAKYARRFA 981
Query: 556 -------------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRAR 602
V+V ++DGF+G ++D+II STVR+N G +GFL++ +R+NV LTRA+
Sbjct: 982 ATLGDRRVRELSKVEVRTVDGFEGRQKDVIIFSTVRNNPAGHVGFLADRRRLNVGLTRAK 1041
Query: 603 HCLWILGNARTLTRKKSVWEALVHDANAR 631
L+++G+ TL + KS + + +
Sbjct: 1042 RGLFVVGSISTLKQSKSFTRGMAANPGGQ 1070
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 51 IQLIWGPPGTGKTKTVSMLLVILLQMKFRT----LVCTPTNVAIKELAARVVK 99
I L+ GPPGTGKTKT+ + V LL+++F LV T TNVA+ L ++K
Sbjct: 599 ISLVQGPPGTGKTKTI-IEAVKLLKVEFEVPQPILVATYTNVAVDNLVEGLLK 650
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 28/293 (9%)
Query: 351 ASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
AS+ +S ME F L IDEAAQ E+ I ++ + + GD CQLP V+S
Sbjct: 343 ASTLVGANSRVMEGQKFTTLFIDEAAQALEAACWIAIRRAS--RVIFAGDHCQLPPTVKS 400
Query: 409 KVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
+ G++L ER+ LL +QYRM+ I F + +FY +I + ++ R
Sbjct: 401 IAALRGGLGKTLMERIVENKPEVVTLLKVQYRMNEEIMRFSSDWFYHGQIVSAPQIKYRG 460
Query: 468 ---YEKRFLHGPMYGPYSFINVFG--GREEFIEHSCR--NMVEVSVVMKILLNLYKAWID 520
Y+ P +I+ +E+F+ S N E + +K L +
Sbjct: 461 ILDYD---------NPMVWIDTSDELSKEQFVGESFGRINKGEAELTLKTLQEYFMKIGK 511
Query: 521 SK---EKLSIGIVSPYSAQVVAIQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ E++ +G++SPY AQV ++ + + + + V ++DGFQG E D+I+IS
Sbjct: 512 QRILDERIDVGVISPYRAQVQYLRSLIKKREFFKPYRSLISVNTVDGFQGQERDVILISL 571
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK---KSVWEALVH 626
VRSN G IGFL++ +R+NVA+TRAR L ILGN TLTR K +WE+L H
Sbjct: 572 VRSNEEGQIGFLNDLRRMNVAITRARMKLIILGNVATLTRHPFYKKLWESLPH 624
>gi|402896228|ref|XP_003911208.1| PREDICTED: probable helicase senataxin [Papio anubis]
Length = 2679
Score = 136 bits (342), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 33/286 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKI---RDSSTVRKRSYE 469
L +H L++QYRMHP I FP++Y Y + R + T+R S
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSS-- 2293
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--- 526
P + PY +V G E S N+ E+ +VM+I+ K D ++ +S
Sbjct: 2294 ----DWP-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRN 2344
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSI 585
IGI++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSI
Sbjct: 2345 IGIITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSVQGSI 2402
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1959 AKICLIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2018
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2019 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2068
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2069 NHRMKK 2074
>gi|440299116|gb|ELP91723.1| hypothetical protein EIN_520800 [Entamoeba invadens IP1]
Length = 1079
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 138/250 (55%), Gaps = 20/250 (8%)
Query: 369 VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG 428
+IDEAAQ E E+ + + V+ GD QLP + S + E +S+FERL
Sbjct: 585 LIDEAAQSIEPETFSAF--AKVNKIVMIGDIQQLPPTILSDEAKEGGLEKSMFERLLLNK 642
Query: 429 YSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF--LHGPMYGPYSFINV 486
LL+ QY MHP+IS F N +FY K+ D T +RS + R + P F++
Sbjct: 643 VPYVLLNTQYLMHPAISKFSNEFFYRGKLNDGVTANERS-DNRINKIFSKKEFPVMFVHC 701
Query: 487 FGGREEFIE--HSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL 544
G E + S N E VV ++ K I+ +E IGI+SPYS Q ++ L
Sbjct: 702 -KGDEGYGSSGKSYGNDAEKEVVKFLVEKYNKEGINDEE---IGIISPYSTQ----RDLL 753
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
G ++ ++V S+DGFQG E++ IIIS VRSN+ G IGFL++ +R+NVALTRAR
Sbjct: 754 GEQHK-----TIQVASVDGFQGNEKEFIIISCVRSNSKGGIGFLADHRRLNVALTRARKG 808
Query: 605 LWILGNARTL 614
L ++G+A TL
Sbjct: 809 LVMVGDAYTL 818
>gi|291228827|ref|XP_002734379.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2926
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 179/374 (47%), Gaps = 42/374 (11%)
Query: 294 VGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSF---CLKRASLFLST 350
+ + ++ K S+C +R+ S F S + + + L+K L + L T
Sbjct: 2557 IALHRVIRKASSKCGKEIREFDSRFRNAIPQSKQDIENYKALIKKAEKDALIGCDVILCT 2616
Query: 351 ASSSYMLHSVAMEPLNFL--VIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVES 408
S + S ++ L L +IDEA E E+ +PL + + VL GD QL +V
Sbjct: 2617 CSEAA---SKRLDKLGILQCIIDEAGMCTEPETLVPLVRAKPEQVVLIGDHRQLQPIVPH 2673
Query: 409 KVSNEACFGRSLFERLSYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS 467
+S++ G SL ER Y + + L +QYRMH +I FPNS FY+ ++ + TV KRS
Sbjct: 2674 NLSSQMGLGVSLLER--YCDENHFIRLKMQYRMHDAICEFPNSQFYDGELETAETVLKRS 2731
Query: 468 YEKRFLHGPMYGPYSFINVFG---GREEFI--------EHSCRNMVEVSVVMKILLNLYK 516
K + G G VF GREE + E S +N+ EV V++I + K
Sbjct: 2732 QFKTTMDGVWPGGKHVPTVFCHCVGREESLKVTTDEGSEQSKKNLQEVKDVVRIAKIMSK 2791
Query: 517 AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIIST 576
+ S I I+S Y AQ I+ +L S G V S+ GFQG E+D II+ST
Sbjct: 2792 RY--SLRTSRIQILSQYRAQCHEIKGELKRANCQSIG----VNSVIGFQGSEQDYIILST 2845
Query: 577 VRS----------NNG---GSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEA 623
VRS G ++GF+++ ++NVALTRAR L I+GNA L R W
Sbjct: 2846 VRSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNA-NLLRTDHNWRK 2904
Query: 624 LVHDANARQCFFNA 637
L+ + + C +A
Sbjct: 2905 LLEEYRRKNCCVDA 2918
>gi|74142749|dbj|BAE33905.1| unnamed protein product [Mus musculus]
Length = 606
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGRSLFERLSY 426
+V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E ++LF+RL
Sbjct: 310 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 369
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G+ LL QYR HP+IS N FYE + + + R+RS +L F NV
Sbjct: 370 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPT-----LCFYNV 424
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + E+S N+ E + +K++ +L + ++S IG+++ Y +Q+ I L +
Sbjct: 425 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 481
Query: 547 KYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
V AV+V ++D FQG E+++ I+S VR+ +GF+ + KR+NVALTR R L
Sbjct: 482 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHL 538
Query: 606 WILGNARTLTRKKSVWEALVHDANARQ 632
I+G+ L RK +W ++ R+
Sbjct: 539 LIVGSLSCL-RKNRLWGRVIQHCEGRE 564
>gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus]
Length = 528
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGRSLFERLSY 426
+V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E ++LF+RL
Sbjct: 246 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 305
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G+ LL QYR HP+IS N FYE + + + R+RS +L F NV
Sbjct: 306 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWL-----PTLCFYNV 360
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + E+S N+ E + +K++ +L + ++S IG+++ Y +Q+ I L +
Sbjct: 361 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 417
Query: 547 KYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
V AV+V ++D FQG E+++ I+S VR+ +GF+ + KR+NVALTR R L
Sbjct: 418 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHL 474
Query: 606 WILGNARTLTRKKSVWEALVHDANARQ 632
I+G+ L RK +W ++ R+
Sbjct: 475 LIVGSLSCL-RKNRLWGRVIQHCEGRE 500
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 44/310 (14%)
Query: 341 LKRASLF---LSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFG 397
+ RA L LS A SS S P + L+IDEA Q E + IPL+ + + +L G
Sbjct: 1092 INRAQLVFCTLSMAGSSVFNQS----PFDVLIIDEACQATEPSTLIPLRTAPTR-IILVG 1146
Query: 398 DECQLPAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
D QLP + +S +LFERLS + LL QYRM+ IS F + FYEN++
Sbjct: 1147 DPMQLPPTI---ISQSKDLSVTLFERLSE-SITPILLDTQYRMNSIISKFASMQFYENRL 1202
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
RD ++ P++FI+ G EE N E++V+++ KA
Sbjct: 1203 RDGVSLESEL------------PFAFIDA-SGTEETEGKDIFNRKEINVILQFSSMAAKA 1249
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ ++GI+SPY QV +++ + + + ++DGFQG E+D IIISTV
Sbjct: 1250 YD------TVGIISPYKGQVGQLKKVIK---------GMDISTVDGFQGQEKDCIIISTV 1294
Query: 578 RSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
RS IGFL++ +R+NVALTRAR+ + I+G + +L ++ W++L+ + A
Sbjct: 1295 RSK---KIGFLNDIRRMNVALTRARYTVIIVG-SMSLLQQDPTWKSLIKYVQENNFVYKA 1350
Query: 638 DDDKDLGKAI 647
+ + K+I
Sbjct: 1351 GEVYSILKSI 1360
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AV + L K I LI GPPGTGKTKTVS ++ L R LVC P+N
Sbjct: 924 LNKSQQVAVSTAL-------KKNITLIQGPPGTGKTKTVSSMIAYFLLQNCRVLVCAPSN 976
Query: 88 VAIKELA 94
A+ L
Sbjct: 977 AAVDMLV 983
>gi|359070644|ref|XP_002691695.2| PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Bos
taurus]
Length = 2663
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 21/288 (7%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+ R
Sbjct: 2165 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2223
Query: 424 LSYL----------GYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L G L L+IQYRMHP I FP+SY Y+ +R + + R
Sbjct: 2224 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILR----TNRGTETSRC 2279
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+ PY +V G E S N+ E+ +VM+ L+ L K +IGI++
Sbjct: 2280 SSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVME-LIKLIKDKRRDVTFRNIGIITH 2338
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNS 591
Y AQ IQ+ L ++ A +V ++D FQG ++D +I++ VR+N GSIGFL++
Sbjct: 2339 YKAQKTMIQKDLDKEFDRKG--AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2396
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2397 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD 2443
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 39/148 (26%)
Query: 28 LNDSQAQAV-LSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
N+ Q +A+ +C A I LI GPPGTGK+KT+ +L LL
Sbjct: 1925 FNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDEN 1984
Query: 76 -----MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG-----DILLLG- 124
+ R LVC P+N A+ EL +++ KE C+D P+G +++ LG
Sbjct: 1985 SNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEK----CKDKK-NPMGNCGDINLVRLGP 2039
Query: 125 ----NNERLK--VDSGVEEIYLDYRVKR 146
NNE LK +DS V ++R+K+
Sbjct: 2040 EKSINNEVLKFSLDSQV-----NHRMKK 2062
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 21/264 (7%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
++++IDEA Q E S IPL + G K VL GD QL + K +A F +SLFERL
Sbjct: 485 FHYVLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERL 543
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFI 484
+G ++LS+QYRM + +P+ FY ++ K F + P +F
Sbjct: 544 ISIGVVPYVLSVQYRMDTDLCEWPSEMFYNGELLTGG--------KGFCRFDLGIPTNFF 595
Query: 485 NVFGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE 542
V GREE N E I+ +L+K + + IG+++PY Q I
Sbjct: 596 YVCYGREEVSASGTSFINQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILN 652
Query: 543 KL-GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
++ G++ N +++ ++DGFQG E+D II+S VRSN IGF+ + +R+NV LTRA
Sbjct: 653 RIFGAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRA 707
Query: 602 RHCLWILGNARTLTRKKSVWEALV 625
+H L I+GN TL K +W L+
Sbjct: 708 KHGLVIIGNPTTLM-KHDIWSNLL 730
>gi|358414658|ref|XP_001787696.2| PREDICTED: probable helicase senataxin [Bos taurus]
Length = 2592
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 21/288 (7%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+ R
Sbjct: 2094 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2152
Query: 424 LSYL----------GYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L G L L+IQYRMHP I FP+SY Y+ +R + + R
Sbjct: 2153 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILR----TNRGTETSRC 2208
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+ PY +V G E S N+ E+ +VM+ L+ L K +IGI++
Sbjct: 2209 SSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVME-LIKLIKDKRRDVTFRNIGIITH 2267
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNS 591
Y AQ IQ+ L ++ A +V ++D FQG ++D +I++ VR+N GSIGFL++
Sbjct: 2268 YKAQKTMIQKDLDKEFDRKG--AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2325
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2326 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD 2372
Score = 50.1 bits (118), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 39/148 (26%)
Query: 28 LNDSQAQAV-LSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
N+ Q +A+ +C A I LI GPPGTGK+KT+ +L LL
Sbjct: 1854 FNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDEN 1913
Query: 76 -----MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG-----DILLLG- 124
+ R LVC P+N A+ EL +++ KE C+D P+G +++ LG
Sbjct: 1914 SNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEK----CKDKK-NPMGNCGDINLVRLGP 1968
Query: 125 ----NNERLK--VDSGVEEIYLDYRVKR 146
NNE LK +DS V ++R+K+
Sbjct: 1969 EKSINNEVLKFSLDSQV-----NHRMKK 1991
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 149/263 (56%), Gaps = 20/263 (7%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
L IDEAAQ E+ IP++ + +L GD CQLP ++S + +A G++L ER+
Sbjct: 341 LFIDEAAQALEAACWIPMRRA--TRVILAGDHCQLPPTIKSLAALKAGLGKTLMERIVEN 398
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRS---YEKRFLHGPMYGPYSF 483
LL +QYRM+ I F ++YFY ++ + ++ R YE M+ S
Sbjct: 399 KPEVVTLLKVQYRMNEQIMQFSSNYFYHGEVETAPQIKYRGILDYEDPM----MWIDTSE 454
Query: 484 INVFGG----REEFI-EHSCR-NMVEVSVVMKILLNLYKAWIDSK---EKLSIGIVSPYS 534
I V +E+FI E+ R N E + ++ L ++ ++ E + +GI+SPY
Sbjct: 455 IEVGPDEPSFKEQFIGENFGRVNKGEAELTLRTLEEYFQKIGKTRILDENIDVGIISPYR 514
Query: 535 AQVVAIQEKLGSK-YVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKR 593
AQV +++ + + + + V ++DGFQG E D+I+IS VR+N+ G IGFL++ +R
Sbjct: 515 AQVQYLKKLIRKREFFKPYRKFISVNTVDGFQGQERDIILISMVRANDDGQIGFLNDLRR 574
Query: 594 VNVALTRARHCLWILGNARTLTR 616
+NVA+TRAR L ILGNA+T+++
Sbjct: 575 MNVAITRARMKLIILGNAQTMSK 597
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 19 TFGPSLSSTLNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKF 78
TF P+ LN SQ +AV L ++++ GPPGTGKT T+ + L +
Sbjct: 161 TFAPTRFPWLNPSQEKAVNEVL------WAKDVEVVHGPPGTGKTTTLVEAINETLMREN 214
Query: 79 RTLVCTPTNVAIKELAARVV 98
+ LVC +N+A+ + ++V
Sbjct: 215 QVLVCAQSNMAVDWICEKLV 234
>gi|297685576|ref|XP_002820362.1| PREDICTED: probable helicase senataxin [Pongo abelii]
Length = 2678
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2175 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2233
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2234 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2289
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2290 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2345
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2346 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSVQGSIGFL 2403
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2404 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2445
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1957 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2016
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2017 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2066
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2067 NHRMKK 2072
>gi|344254581|gb|EGW10685.1| Uncharacterized protein FLJ44066 [Cricetulus griseus]
Length = 351
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 16/275 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGR 418
M L F +V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E +
Sbjct: 47 MNDLKFPVVVLDECSQMTEPASLLPIARFESEKLILVGDPKQLPPTIQGSDAAHENGLEQ 106
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
+LF+RL +G+ +L QYR HP IS N FYE + + + +RS +L
Sbjct: 107 TLFDRLCLMGHKPVVLRTQYRCHPVISAIANDLFYEGNLMNGISETERSPVVEWL----- 161
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F NV G + E+S +N+ E + +K++ +L + I IG+++ Y +Q+
Sbjct: 162 PTLCFYNVTGAEQVERENSFQNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQMY 218
Query: 539 AIQEKLGSKYVNSA-GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
I L + N AV+V ++D FQG E+++II+S VR+ +GF+ + KR+NVA
Sbjct: 219 KICHLLSAMDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVA 275
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
LTR+R L I+G+ L RK +WE ++ R+
Sbjct: 276 LTRSRRHLLIVGSLSCL-RKNRLWERVIQHCEGRE 309
>gi|336379199|gb|EGO20355.1| hypothetical protein SERLADRAFT_477852 [Serpula lacrymans var.
lacrymans S7.9]
Length = 376
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 32/288 (11%)
Query: 359 SVAMEPLNFLVI--DEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACF 416
SVA+ ++F V+ DEA+ E S IPL + G +H L GD QLP ++ S+ +
Sbjct: 25 SVALNVVDFPVVFLDEASMSTEPASLIPL-MKGSQHVALIGDHKQLPPIITSREAKLKGL 83
Query: 417 GRSLFERLSYLGYSKH-LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG 475
G SLFERL+ G +L IQYRMHP+IS FP+ FY +++ + + L
Sbjct: 84 GISLFERLAEEGVVPSIMLDIQYRMHPTISHFPSLEFYNFSLQNGTVDASGNTTPSLL-- 141
Query: 476 PMYGPYSFINVFGGREE---FIEH----SCR-----NMVEVSVVMKILLNLYKAWIDSKE 523
P + +N+ G F++H S R N E ++V ++ +L K
Sbjct: 142 PPLSSHLEVNLETGNRPSVVFLDHTGSESARDRSRVNWNEANIVCSVVEDLLLQNEHLKG 201
Query: 524 KLSIGIVSPYSAQV------VAIQEKLGSKYVNSAG-------FAVKVMSIDGFQGGEED 570
K IGI++PY+AQ+ + K +++ N+ G +++ ++DGF+G E++
Sbjct: 202 K-DIGIIAPYAAQISLLTRLLNTNAKYHTRFKNALGDHRVMQLSNIEIKTVDGFEGREKE 260
Query: 571 LIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+II STVR+N G IGFL++ +R+NV LTRA+ L+++G+ TL K
Sbjct: 261 VIIFSTVRNNTSGYIGFLADRRRLNVGLTRAKRGLFVVGSISTLKAGK 308
>gi|328777550|ref|XP_001121702.2| PREDICTED: probable helicase senataxin-like [Apis mellifera]
Length = 1528
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 177/355 (49%), Gaps = 36/355 (10%)
Query: 309 FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYM-----LHSVAME 363
+ L K + S NELN+ + E L+ + ++ L+ A + T SS Y + + +
Sbjct: 1182 YELLKNRESLNELNIRNK-EYMKLQRITENKFLEYADIITCTLSSCYTSQMESIFGINNK 1240
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
++ ++DEA Q E+E+ IPL L GI +L GD QLPA V S + + +S+F R
Sbjct: 1241 KISVCIVDEATQSCEAETLIPLML-GINILILVGDPNQLPATVLSTQAKKYGLDQSIFSR 1299
Query: 424 LSYL-----GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
+ +L QYRM IS +PN +FY K++ ++ R ++ P Y
Sbjct: 1300 VQNAFELQPNNPIIMLDTQYRMQHDISSWPNKFFYGGKLK-TAVERDDTF-------PFY 1351
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILL-NLYKAWIDSKEK-LSIGIVSPYSAQ 536
PY + N E V I+ L A +D+ E +S GI++PY+ Q
Sbjct: 1352 -PYRI----LNLNSNQNDNNSNNEEADFVANIVYCMLTSANLDNWESCISCGILTPYNNQ 1406
Query: 537 ----VVAIQEKLGSKYVN-SAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNS 591
+ I EK+ S N + V ++DGFQG E D+II+S VRS IGFLS+
Sbjct: 1407 KSMILTKIHEKIFSLPENIKKKVKIDVNTVDGFQGQECDIIIMSCVRS---QKIGFLSDR 1463
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADDDKDLGKA 646
+R+ VALTRA+ L + GN R +W +L+ DA +R+ FFN D + DL K
Sbjct: 1464 QRLCVALTRAKRSLIMCGNFNIFMRY-PMWNSLISDAKSRKVFFNVDTNADLDKV 1517
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKAT-IQLIWGPPGTGKTKTVSMLLVILLQ---------MK 77
LN Q +AV + + HK T + I GPPGTGK+K + ++ +L
Sbjct: 1005 LNQKQIEAVNRVTKAVV--HKDTKLCFIQGPPGTGKSKVIVNIITQILYGNNRYTSNGSS 1062
Query: 78 FRTLVCTPTNVAIKELAARVVKL 100
F+ LVC P+N AI E+ R++ +
Sbjct: 1063 FKMLVCAPSNTAIDEIVLRLLNV 1085
>gi|354501487|ref|XP_003512822.1| PREDICTED: hypothetical protein LOC100755417 [Cricetulus griseus]
Length = 1856
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 16/275 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGR 418
M L F +V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E +
Sbjct: 1552 MNDLKFPVVVLDECSQMTEPASLLPIARFESEKLILVGDPKQLPPTIQGSDAAHENGLEQ 1611
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
+LF+RL +G+ +L QYR HP IS N FYE + + + +RS +L
Sbjct: 1612 TLFDRLCLMGHKPVVLRTQYRCHPVISAIANDLFYEGNLMNGISETERSPVVEWLPT--- 1668
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F NV G + E+S +N+ E + +K++ +L + I IG+++ Y +Q+
Sbjct: 1669 --LCFYNVTGAEQVERENSFQNVAEAAFTLKLIQSLIASGIAGS---MIGVITLYKSQMY 1723
Query: 539 AIQEKLGSKYVNSA-GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
I L + N AV+V ++D FQG E+++II+S VR+ +GF+ + KR+NVA
Sbjct: 1724 KICHLLSAMDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVA 1780
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
LTR+R L I+G+ L RK +WE ++ R+
Sbjct: 1781 LTRSRRHLLIVGSLSCL-RKNRLWERVIQHCEGRE 1814
>gi|328851436|gb|EGG00591.1| hypothetical protein MELLADRAFT_118002 [Melampsora larici-populina
98AG31]
Length = 1001
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 139/266 (52%), Gaps = 27/266 (10%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SY 426
++IDEAA E + +PL G HAVL GD QLPA+ S + FG SLFER+ S
Sbjct: 702 VIIDEAAMCHEPTALVPL-TKGSAHAVLVGDHKQLPAITLSPAAEAHGFGISLFERIQSQ 760
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH-----GPMYG-- 479
LL QYRM+P IS FPN+ FY++ + DS ++ S + + H GP
Sbjct: 761 QSVQSILLHKQYRMNPIISAFPNAEFYDHALVDS--IKPDSIKPVYFHFDRSLGPEQKSR 818
Query: 480 PYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGIVSPYSAQ 536
SF+ E IE + N E +V+ IL +L + + +LS IGI++PY Q
Sbjct: 819 AVSFV-THNHLETKIEKTLTNQTEAEIVLGILRDLLR----TNPELSGRDIGIIAPYRGQ 873
Query: 537 VVAIQE--------KLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
V +Q L S V++ ++DGFQG E+ +II+S VR N IGFL
Sbjct: 874 VSLLQSLQRQPQKASLIRNSEQSYRNEVEINTVDGFQGREKPVIILSCVRGNFERQIGFL 933
Query: 589 SNSKRVNVALTRARHCLWILGNARTL 614
++ +R NVA TRA+ ++G+ TL
Sbjct: 934 ADLRRFNVAATRAKQKFIVVGHLDTL 959
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 12/76 (15%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRT----LVC 83
LN+ Q +A+ + + + LI GPPGTGKT+T+ + +V LL++ F+ VC
Sbjct: 504 LNEPQTRAIAMAI-------SSPLSLIQGPPGTGKTQTI-IQMVALLKIHFQVSQPIAVC 555
Query: 84 TPTNVAIKELAARVVK 99
PT+V++ L +VK
Sbjct: 556 APTHVSVDNLVLGLVK 571
>gi|380772504|gb|AFE61892.1| hypothetical protein [Mus musculus]
Length = 1843
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 143/267 (53%), Gaps = 14/267 (5%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGRSLFERLSY 426
+V+DE +Q+ E S +P+ + +L GD QLP ++ S ++E ++LF+RL
Sbjct: 1547 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1606
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G+ LL QYR HP+IS N FYE + + + R+R +L F NV
Sbjct: 1607 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERGPVLEWLPT-----LCFYNV 1661
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + E+S N+ E + +K++ +L + I+S IG+++ Y +Q+ I L +
Sbjct: 1662 TGAEQVERENSFVNVAEATFTLKLIQSLMASGIES---CMIGVITLYKSQMYKICNLLSA 1718
Query: 547 KYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCL 605
V AV+V ++D FQG E+++ I+S VR+ +GF+ + KR+NVALTR R L
Sbjct: 1719 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTRQ---VGFIDSEKRMNVALTRGRRHL 1775
Query: 606 WILGNARTLTRKKSVWEALVHDANARQ 632
I+G+ L RK +W ++ R+
Sbjct: 1776 LIVGSLSCL-RKNRLWGRVIQHCEGRE 1801
>gi|168273052|dbj|BAG10365.1| senataxin [synthetic construct]
Length = 2677
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2288
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2289 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2344
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1956 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2016 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
>gi|412987690|emb|CCO20525.1| predicted protein [Bathycoccus prasinos]
Length = 849
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 166/307 (54%), Gaps = 30/307 (9%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
A E+ + L ++ L++AS+ +T + + ++ E + +V+DEAAQ E + + +
Sbjct: 532 AKEEKKRQKLAQAKTLEKASVICATLAGALSF-ALKNEEFDVVVVDEAAQALEC-AVLGV 589
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL----SYLGYSKHLLSIQYRMH 441
+ G K VL GD QLP V S + + +LFERL + +L+ QYRMH
Sbjct: 590 VMKG-KKLVLAGDHLQLPPTVLSDEAAQKGLSTTLFERLVRNKRFGAKITTMLNTQYRMH 648
Query: 442 PSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEH----- 496
I + + Y++K+ + +VR R +E+ + ++ G + F+E+
Sbjct: 649 EDIMVWSSDAMYDSKLIAAESVRFRKFEQ------FDKVLTLVDTTGEDDSFMENVGDDD 702
Query: 497 --SCRNMVEVSVVM----KILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVN 550
S N+ E +VM K L + YK + IG+++PYS QV ++E ++
Sbjct: 703 DDSKSNLGEAEIVMQTIEKFLSDAYKILPNE-----IGVITPYSGQVSLLREMRAARAEE 757
Query: 551 SAGFA-VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILG 609
+A F +++ ++DGFQG E++ IIISTVRSN +GFLS+++R+NVA+TRAR + ++
Sbjct: 758 NALFKDIEISTVDGFQGREKEAIIISTVRSNENNEVGFLSDARRMNVAVTRARKHVTLIC 817
Query: 610 NARTLTR 616
N T+++
Sbjct: 818 NCETVSK 824
>gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [Homo sapiens]
Length = 2677
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2288
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2289 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2344
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 2452
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1956 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2016 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
>gi|113722133|ref|NP_055861.3| probable helicase senataxin [Homo sapiens]
gi|296453021|sp|Q7Z333.4|SETX_HUMAN RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein; AltName: Full=SEN1 homolog
Length = 2677
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2288
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2289 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2344
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1956 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2016 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
>gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens]
Length = 2663
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2160 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2218
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2219 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2274
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2275 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2330
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2331 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2388
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2389 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 2438
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1942 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2001
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2002 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2051
>gi|299741090|ref|XP_001834211.2| hypothetical protein CC1G_09711 [Coprinopsis cinerea okayama7#130]
gi|298404551|gb|EAU87614.2| hypothetical protein CC1G_09711 [Coprinopsis cinerea okayama7#130]
Length = 720
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 37/263 (14%)
Query: 391 KHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYSKH-LLSIQYRMHPSISCFPN 449
+H L GD QLP ++ SK + G SLFERL+ G +L QYRMHP IS FP+
Sbjct: 336 QHLALIGDHRQLPPVILSKEAQRLGLGVSLFERLTKEGVVPSVMLDTQYRMHPDISNFPS 395
Query: 450 SYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSF------INVF---------GGREEFI 494
+ FY +RD TV ++ R L PM + F GRE
Sbjct: 396 NEFYLGTLRDG-TVDEQGRVSRDLFPPMSQYLDLDLNLEKLGAFRSEYQYREEKGREGMK 454
Query: 495 EHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQE-----------K 543
+ S N E ++ ++++L + D + K IGI++PY AQ+ +
Sbjct: 455 DKSRINRTEAHIIANVVVDLLLSNPDLQGK-DIGIIAPYVAQISLLTRIFNSPDATSPSS 513
Query: 544 LGSKYVNSAGFA--------VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVN 595
GSK+ + G +++ ++DGF+G E+D+II STVR+N G+IGFL++ +R+N
Sbjct: 514 YGSKFRSVLGDTLALQQLPQIEIKTVDGFEGREKDVIIFSTVRNNAEGNIGFLADRRRLN 573
Query: 596 VALTRARHCLWILGNARTLTRKK 618
V LTRA+ L+++GN TL K
Sbjct: 574 VGLTRAKRALFVVGNIGTLKEGK 596
Score = 47.0 bits (110), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCT 84
LN SQ +A+ S + + L+ GPPGTGKTKT+ L +L Q+ LVCT
Sbjct: 149 LNSSQIRAMASMIGN-------RLSLVQGPPGTGKTKTIIETLKLLKLHFQVPHPILVCT 201
Query: 85 PTNVA----IKELAARVVKLVKESVERDCRDALF 114
TNVA ++ LAA VK ++ R +L
Sbjct: 202 YTNVAVDNLVEGLAAAGVKPLRVGAVGSVRPSLL 235
>gi|395844356|ref|XP_003794928.1| PREDICTED: probable helicase senataxin [Otolemur garnettii]
Length = 2681
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2181 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2239
Query: 424 L----------SYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +G L L++QYRMHP I FP+SY Y R+ T R+ +
Sbjct: 2240 FYKLLEENVEHNMIGRLPVLQLTVQYRMHPDICLFPSSYVYN---RNLKTNRQTEAIRCS 2296
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
P + PY +V G E S N+ E+ +VM+I+ + + D + +IGI++
Sbjct: 2297 ADWP-FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDVTFR-NIGIITH 2354
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFLSNS 591
Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N GSIGFL++
Sbjct: 2355 YKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLASL 2412
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2413 QRLNVTITRAKYSLFILGHLRTLMENQH-WNYLIQDAQKRGAIIKTCD 2459
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1963 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDE 2022
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNERLK--VDSGVEEIYL 140
L +++ KE C+D PLG +++ LG NNE LK +DS V
Sbjct: 2023 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINNEVLKFSLDSQV----- 2072
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2073 NHRMKK 2078
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 171/324 (52%), Gaps = 32/324 (9%)
Query: 328 EKDLLEDLLKSFCLKRASLFLST--ASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPL 385
E + LE+ + ++ +F ST +S+ +L + P+ F IDEAAQ E+ S IP+
Sbjct: 343 EAEHLEEYIMYDVFQQTQVFASTLVGASNSVLKGMKF-PIVF--IDEAAQGLEAASWIPI 399
Query: 386 QLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLGYS-KHLLSIQYRMHPSI 444
Q +K V+ GD CQLP ++S + +A +LFE+++ +L +QYRM I
Sbjct: 400 Q-KALK-VVMAGDHCQLPPTIKSYEAAKAGLSETLFEKVTKRQPQVTKMLQLQYRMPELI 457
Query: 445 SCFPNSYFYENKIRDSSTVRKRSYEKRFLHG--PMYGPYSFINVFG-GREEFIEH---SC 498
F N FY+N++ + ++ E FL P+ FI+ G G E IE S
Sbjct: 458 MGFSNKIFYQNELGAA-----KNTESHFLSEGEPVL---EFIDTAGSGFVEAIEEESLST 509
Query: 499 RNMVEVSVVMKILLNLYK----AWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYV--NSA 552
N E ++ L +L K A I K + +IG+++PY AQV E L Y N
Sbjct: 510 FNQEEARFALQYLEDLLKRTGIAKIKEK-RWTIGLIAPYRAQVRKFNELLFESYAFPNLR 568
Query: 553 GFA--VKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGN 610
F + + SIDGFQG E D+I+IS VRSN G IGFL++++R+NVALTRA+ L ++G+
Sbjct: 569 SFPELLTIDSIDGFQGQERDIILISLVRSNAKGEIGFLADTRRMNVALTRAKRKLVVIGD 628
Query: 611 ARTLTRKKSVWEALVHDANARQCF 634
+ TL+ S + A C+
Sbjct: 629 SATLSH-HSFYNAFFDYVEENNCY 651
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ QA L + + + +I GPPGTGKT T+ ++ LQ + LVC P+N
Sbjct: 200 LNPSQ-QAALQLVSAAK-----DVAIIHGPPGTGKTTTLVQAVIGSLQQHAQVLVCAPSN 253
Query: 88 VAIKELAARV 97
A+ L ++
Sbjct: 254 AAVDLLVEKI 263
>gi|350407478|ref|XP_003488098.1| PREDICTED: helicase sen1-like [Bombus impatiens]
Length = 1551
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 176/350 (50%), Gaps = 42/350 (12%)
Query: 309 FVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYM-----LHSVAME 363
+ L K ++S NE+N S E L+ + L A + T SS Y + V +
Sbjct: 1206 YELLKNRTSTNEVNDKSR-ESIRLQRAAEYKILDFADIITCTLSSCYTSQMEYIFGVNKK 1264
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
++ ++DEA Q E+E+ IPL L GI VL GD QLPA V S + + +S+F R
Sbjct: 1265 KISVCIVDEATQSCEAETLIPLML-GIDTLVLVGDHNQLPATVLSTRAKKYGLDQSIFSR 1323
Query: 424 L-SYLGYSKH----LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
+ S + +L QYRM P IS +PN +FY K++++ + P +
Sbjct: 1324 VQSAFDLQPNNPIIMLDTQYRMQPDISSWPNKFFYGCKLKNAVECND--------NFPFH 1375
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKI---LLNLYKAWIDSKEK-LSIGIVSPYS 534
Y +N+ + H N E V I +LN A +D+ + +S GI++PY+
Sbjct: 1376 S-YRILNLVTNQN----HDNSNNEEADFVANIIYCMLNF--ANLDNWQSCISCGILTPYN 1428
Query: 535 AQVVAIQEKLGSKYVNSAGFAVK------VMSIDGFQGGEEDLIIISTVRSNNGGSIGFL 588
Q I K+ K ++S VK V ++D FQG E D+II+S VRS IGFL
Sbjct: 1429 NQRSMILTKVNEK-ISSLPENVKRKIKYIVDTVDRFQGQECDVIILSCVRSQ---KIGFL 1484
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAD 638
S+ +R+ VALTRA+H L I GN R +W +L+ DA AR+ FFN +
Sbjct: 1485 SDRQRLCVALTRAKHSLIICGNFNIFMR-YPMWNSLIADAKARKVFFNVN 1533
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ---------MKF 78
LN+ Q +AV S + + + I GPPGTGK+K + ++ +L F
Sbjct: 1029 LNEKQMEAV-SKITKAVIQKDTKLCFIQGPPGTGKSKVIVNIVTQILYGNNRYTSNGSSF 1087
Query: 79 RTLVCTPTNVAIKELAARVVKL 100
LVC P+N AI ++ R++++
Sbjct: 1088 TMLVCAPSNAAIDDIVLRLLEI 1109
>gi|187951665|gb|AAI37351.1| Senataxin [Homo sapiens]
Length = 2677
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2288
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2289 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2344
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1956 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2016 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
>gi|327274126|ref|XP_003221829.1| PREDICTED: hypothetical protein LOC100561644 [Anolis carolinensis]
Length = 2087
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 150/275 (54%), Gaps = 16/275 (5%)
Query: 362 MEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGR 418
M+ L F +++DE +Q+ E S +P+ + VL GD QLP ++ S+ ++ +
Sbjct: 1779 MKNLTFPIVILDECSQMTEPASLLPVARFECEKLVLVGDPKQLPPTIQGSESAHGNGLEQ 1838
Query: 419 SLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMY 478
+LF+R+ +GY LL QYR HP+IS N FYE + + + + RS +L
Sbjct: 1839 TLFDRMCLMGYEPILLRTQYRCHPAISAIANDLFYEGNLLNGISEKDRSPLIDWLPT--- 1895
Query: 479 GPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F NV G + ++S NM E ++K++ ++ + E IG+++ Y +Q+
Sbjct: 1896 --LCFYNVNGFEQMERDNSFHNMAEAFFIVKLIQSMIAS---GAEGSMIGVITLYKSQMS 1950
Query: 539 AIQEKLGSKYVNSAGF-AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVA 597
I LG+ +++ AV+V ++D FQG E+++II+S VR+ +GF+ + KRVNVA
Sbjct: 1951 KICNLLGAVQSDASLIKAVQVSTVDAFQGAEKEIIILSCVRTKQ---VGFIDSEKRVNVA 2007
Query: 598 LTRARHCLWILGNARTLTRKKSVWEALVHDANARQ 632
LTR + L I+GN L RK VW +++ R+
Sbjct: 2008 LTRGKRHLLIVGNLNCL-RKNKVWGSVIQHCTERK 2041
>gi|426222918|ref|XP_004005627.1| PREDICTED: probable helicase senataxin [Ovis aries]
Length = 2662
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 21/288 (7%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+ R
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 424 LSYL----------GYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L G L L+IQYRMHP I FP+SY Y+ ++ + + R
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYVYDGALK----TNRGTETSRC 2278
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+ PY +V G E S N+ E+ +VM+ L+ L K +IGI++
Sbjct: 2279 SSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVME-LIKLIKDKRRDINFRNIGIITH 2337
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNS 591
Y AQ IQ+ L ++ A +V ++D FQG ++D +I++ VR+N GSIGFL++
Sbjct: 2338 YKAQKTMIQKDLDKEFDRKG--AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2395
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 2396 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD 2442
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 38/126 (30%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ +L LL + R LVC P+N A+ E
Sbjct: 1946 AKICLIHGPPGTGKSKTIVGILYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDE 2005
Query: 93 LAARVVKLVKESVERDCRDALFFPLG-----DILLLG-----NNE--RLKVDSGVEEIYL 140
L +++ KE C+D P+G +++ LG NNE R +DS V
Sbjct: 2006 LMKKIILEFKEK----CKDKK-NPMGNCGDINLVRLGPEKSINNEVLRFSLDSQV----- 2055
Query: 141 DYRVKR 146
++R+K+
Sbjct: 2056 NHRMKK 2061
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 146/272 (53%), Gaps = 16/272 (5%)
Query: 358 HSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
+S ME F L IDEAAQ E+ IP++ + V GD CQLP +++ + A
Sbjct: 353 NSRIMEGQKFDTLFIDEAAQALEAACWIPIRRAS--RVVFAGDHCQLPPTIKNIAAMRAG 410
Query: 416 FGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLH 474
G++L ER+ LL +QYRM+ I F + +FY ++ + +R RS + H
Sbjct: 411 LGKTLMERIVENKPEVVTLLKVQYRMNEEIMRFSSDWFYHGEVESAPQIRYRSILD-YDH 469
Query: 475 GPMYGPYSFINV----FGGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSK---EKL 525
++ S +++ +EEF+ S N E + + L + + E +
Sbjct: 470 PMLWLDTSKVDIGDDEVSFKEEFVGESFGRINKGEAELTLNSLQEYFTKIGKQRILDESI 529
Query: 526 SIGIVSPYSAQVVAIQEKL-GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGS 584
+G++SPY AQV +++ + K+ + V ++DGFQG E D+I+IS VR+N+ G
Sbjct: 530 DVGVISPYRAQVQYLRKLIRKRKFFKPYRHLITVNTVDGFQGQERDVILISMVRANDEGQ 589
Query: 585 IGFLSNSKRVNVALTRARHCLWILGNARTLTR 616
IGFL + +R+NVA+TRAR L ILGNA T+T+
Sbjct: 590 IGFLKDLRRMNVAITRARMKLIILGNAETMTK 621
>gi|296482130|tpg|DAA24245.1| TPA: senataxin [Bos taurus]
Length = 823
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 21/288 (7%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+ R
Sbjct: 325 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 383
Query: 424 LSYL----------GYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L G L L+IQYRMHP I FP+SY Y+ +R + + R
Sbjct: 384 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILR----TNRGTETSRC 439
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSP 532
+ PY +V G E S N+ E+ +VM+ L+ L K +IGI++
Sbjct: 440 SSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVME-LIKLIKDKRRDVTFRNIGIITH 498
Query: 533 YSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSN-NGGSIGFLSNS 591
Y AQ IQ+ L ++ A +V ++D FQG ++D +I++ VR+N GSIGFL++
Sbjct: 499 YKAQKTMIQKDLDKEFDRKG--AAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 556
Query: 592 KRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
+R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 557 QRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD 603
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 39/148 (26%)
Query: 28 LNDSQAQAV-LSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQ----------- 75
N+ Q +A+ +C A I LI GPPGTGK+KT+ +L LL
Sbjct: 85 FNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDEN 144
Query: 76 -----MKFRTLVCTPTNVAIKELAARVVKLVKESVERDCRDALFFPLG-----DILLLG- 124
+ R LVC P+N A+ EL +++ KE C+D P+G +++ LG
Sbjct: 145 SNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEK----CKDK-KNPMGNCGDINLVRLGP 199
Query: 125 ----NNERLK--VDSGVEEIYLDYRVKR 146
NNE LK +DS V ++R+K+
Sbjct: 200 EKSINNEVLKFSLDSQV-----NHRMKK 222
>gi|31874607|emb|CAD98045.1| hypothetical protein [Homo sapiens]
Length = 2677
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 2288
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 2289 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 2344
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1956 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2015
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 2016 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 2065
>gi|448649355|ref|ZP_21680068.1| DNA-binding protein-like protein [Haloarcula californiae ATCC
33799]
gi|445773999|gb|EMA25028.1| DNA-binding protein-like protein [Haloarcula californiae ATCC
33799]
Length = 741
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 143/281 (50%), Gaps = 32/281 (11%)
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
RA + T +S+ L A E + +V+DEA Q + S IPL + AVL GD QL
Sbjct: 449 RADVVAVTNNSAATL---ARE-FDLVVLDEATQSTCAASCIPLVRA--DRAVLAGDHRQL 502
Query: 403 PAMVESKVSNEACFGRSLFERLS-----YLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
P S E+ +G SLFE L Y G L + QYRMH I+ FPN FY+ +
Sbjct: 503 PPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQLQT-QYRMHRDIAYFPNRRFYDRTL 561
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
R+ V ++ + G NV GGR E + HS N E +V ++ +L
Sbjct: 562 RNGRAVNPLP-DRPAIEG--------YNV-GGRVETVGHSKSNPTEARLVAHLVEDL--- 608
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ IG+++PYSAQV I+E L + AG V V +ID FQGGE I++S V
Sbjct: 609 -LSDVPANEIGVITPYSAQVSRIRETLTER--TDAGDRVTVDTIDSFQGGERTAIVLSLV 665
Query: 578 RSNNGGSIGFLS----NSKRVNVALTRARHCLWILGNARTL 614
RSN G++GFL +R+NVALTRA+ ++ + TL
Sbjct: 666 RSNAEGTVGFLGRPVDGPRRLNVALTRAKQYCAVVADWHTL 706
>gi|307107371|gb|EFN55614.1| hypothetical protein CHLNCDRAFT_133757 [Chlorella variabilis]
Length = 2033
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 16/285 (5%)
Query: 366 NFLVIDEAAQLKESESTIPLQL-SGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
+ ++ DEAAQ E + I LQL + VL GD QLPA V S+ + A +SLFERL
Sbjct: 1726 DAIICDEAAQALEPSTLIALQLLAPGGRLVLVGDPQQLPATVVSRAAAAAALAQSLFERL 1785
Query: 425 SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHG-------PM 477
GY LLS QYRMHP+IS FP S+FY K+ D++ V P
Sbjct: 1786 MQAGYPLCLLSQQYRMHPAISAFPASFFYSGKLLDAAAVAGGGSAGAGGGRTAPWHDRPC 1845
Query: 478 YGPYSFIN--VFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSA 535
P +F + S N E V + L + ++ + +++PY A
Sbjct: 1846 LPPLAFWDCREGREWGGGGGSSVSNTEEAEVAYVLYAELVGRY--RQDVGDVAVLTPYKA 1903
Query: 536 QVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIG---FLSNSK 592
Q+ ++ + +A AV+ ++DGFQG E D++I S VR++ GS G FL++ +
Sbjct: 1904 QLSQLRRTFQQRGGTAAAEAVQFATVDGFQGREADVVIFSCVRAHGAGSGGGVGFLADCR 1963
Query: 593 RVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNA 637
R+NVALTR R LW++G++ TL + W+ L+ +C F A
Sbjct: 1964 RMNVALTRGRRSLWVIGHSATLEACEP-WQELMRHCRQHRCLFVA 2007
>gi|296191064|ref|XP_002743464.1| PREDICTED: probable helicase senataxin [Callithrix jacchus]
Length = 2678
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 153/286 (53%), Gaps = 33/286 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 2175 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2233
Query: 424 --------LSYLGYSKH---LLSIQYRMHPSISCFPNSYFYENKI---RDSSTVRKRSYE 469
+ Y S+ L+IQYRMHP I FP++Y Y + R + TVR S
Sbjct: 2234 FCKLLEENVEYNMISRLPILRLTIQYRMHPDICLFPSNYIYNRNLKTNRQTETVRCSS-- 2291
Query: 470 KRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS--- 526
P + PY +V G E S N+ E+ K+++ L K D ++ +S
Sbjct: 2292 ----DWP-FQPYLVFDVGDGSERRDNDSYVNVQEI----KLVIELIKLIKDKRKDVSFRN 2342
Query: 527 IGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSI 585
IGI++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N GSI
Sbjct: 2343 IGIITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANTMQGSI 2400
Query: 586 GFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
GFL++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R
Sbjct: 2401 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2445
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 40/140 (28%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1957 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 2016
Query: 93 LAARVVKLVKESVER------DCRDALFFPLGDILLLGN-----------NERLKVD--S 133
L +++ KE + +C D LG + N N R+K D S
Sbjct: 2017 LMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPS 2076
Query: 134 GVEEI-----YLDYRVKRLA 148
V+E+ +LDY++ L+
Sbjct: 2077 HVQEMHRRKEFLDYQLDELS 2096
>gi|448736335|ref|ZP_21718469.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Halococcus thailandensis JCM 13552]
gi|445806246|gb|EMA56394.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Halococcus thailandensis JCM 13552]
Length = 353
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 145/290 (50%), Gaps = 35/290 (12%)
Query: 342 KRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQ 401
KRA + ST S+ L + +VIDEA Q + IPL S AVL GD Q
Sbjct: 54 KRADVVASTNGSAASLDRT----FDMVVIDEATQATLPSTCIPL--SKADRAVLAGDHRQ 107
Query: 402 LPAMVESKVSNEACF----GRSLFERL-----SYLGYSKHLLSIQYRMHPSISCFPNSYF 452
LP S+ E G SLFE L Y G L + QYRMH I+ FPN F
Sbjct: 108 LPPYSASEEPPEVTLTTGTGFSLFEHLYAEDGVYEGVGVPLHT-QYRMHRDIARFPNQRF 166
Query: 453 YENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILL 512
Y+N + R+ + + P+ G Y GG E +S N E +V ++
Sbjct: 167 YDNLLESG-----RAIDSLDDYPPLVG-YDI----GGSETISRNSTANPTEARLVSHLVE 216
Query: 513 NLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLI 572
+ ++ E IG+++PY+AQ I++ L S V++ +KV +ID FQG E +I
Sbjct: 217 EFVNSGVNPIE---IGVITPYTAQKDEIKDVLDSASVDTG--PIKVDTIDAFQGSENSVI 271
Query: 573 IISTVRSNNGGSIGFLS----NSKRVNVALTRARHCLWILGNARTLTRKK 618
+IS VRSN G IGFL +R+NVALTRA+ I+G+ RTLTR++
Sbjct: 272 LISLVRSNPDGRIGFLGRPEDGPRRLNVALTRAQRFCGIIGDWRTLTRER 321
>gi|449265846|gb|EMC76976.1| hypothetical protein A306_15842 [Columba livia]
Length = 911
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 143/263 (54%), Gaps = 17/263 (6%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVE-SKVSNEACFGRSLFERLSY 426
+++DE +Q+ E S +P+ + VL GD QLP ++ S+ +E ++LF+RL
Sbjct: 622 VMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPAIQGSESVHEKGLEQTLFDRLCL 681
Query: 427 LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
+G++ LL QYR HP+IS N FYE + D + RS +L F +V
Sbjct: 682 MGHTTILLRTQYRCHPAISAIANELFYEGNLIDGVSANDRSPLLDWL-----PTLCFYSV 736
Query: 487 FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGS 546
G + ++S NM EV +K++ L + I+ +IG+++ Y +Q+ IQ L S
Sbjct: 737 NGVEQIERDNSFYNMAEVHFTVKLIQALTASGIEGS---AIGVITLYKSQMCKIQNLLSS 793
Query: 547 KYVNSAGF---AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARH 603
V S F AV+V ++D FQG E+++I++S VR+ GF+ + KR+NVALTRA+
Sbjct: 794 --VQSEAFETKAVQVSTVDAFQGAEKEIIVLSCVRTRQ---FGFIDSEKRMNVALTRAKR 848
Query: 604 CLWILGNARTLTRKKSVWEALVH 626
L I+GN L++ + + H
Sbjct: 849 HLLIVGNLACLSKNRLWGRVICH 871
>gi|55377267|ref|YP_135117.1| DNA-binding protein-like protein [Haloarcula marismortui ATCC
43049]
gi|55229992|gb|AAV45411.1| DNA binding protein eukaryotic-like [Haloarcula marismortui ATCC
43049]
Length = 741
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 143/281 (50%), Gaps = 32/281 (11%)
Query: 343 RASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQL 402
RA + T +S+ L A E + +V+DEA Q + S IPL + AVL GD QL
Sbjct: 449 RADVVAVTNNSAATL---ARE-FDLVVLDEATQSTCAASCIPLVRA--DRAVLAGDHRQL 502
Query: 403 PAMVESKVSNEACFGRSLFERLS-----YLGYSKHLLSIQYRMHPSISCFPNSYFYENKI 457
P S E+ +G SLFE L Y G L + QYRMH I+ FPN FY+ +
Sbjct: 503 PPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQLQT-QYRMHRDIAYFPNRRFYDRTL 561
Query: 458 RDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKA 517
R+ V ++ + G NV GGR E + HS N E +V ++ +L
Sbjct: 562 RNGRAVDPLP-DRPAIEG--------YNV-GGRVETVGHSKSNPTEARLVAHLVEDL--- 608
Query: 518 WIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTV 577
+ IG+++PYSAQV I+E L + AG V V +ID FQGGE I++S V
Sbjct: 609 -LSDVPANEIGVITPYSAQVSRIRETLTER--TDAGDRVTVDTIDSFQGGERTAIVLSLV 665
Query: 578 RSNNGGSIGFL----SNSKRVNVALTRARHCLWILGNARTL 614
RSN G++GFL +R+NVALTRA+ ++ + TL
Sbjct: 666 RSNAEGTVGFLRRPVDGPRRLNVALTRAKQYCAVVADWHTL 706
>gi|335281152|ref|XP_003353743.1| PREDICTED: probable helicase senataxin [Sus scrofa]
Length = 2661
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 151/283 (53%), Gaps = 27/283 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + VL GD QLP V S + + + +S+ R
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 424 L----------SYLGYSKHL-LSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
+ +G L L++QYRMHP I FP++Y Y ++ +S +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDW 2286
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D + ++ IGI
Sbjct: 2287 ----PFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII----KLIKDKRRDVTFRNIGI 2338
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNG-GSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++DGFQG ++D +I++ VR+ GSIGFL
Sbjct: 2339 ITHYKAQKTLIQKDLDKEF-DRKGPA-EVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFL 2396
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANAR 631
++ +R+NV +TRA++ L+ILG+ RTL R+ W L+ DA R
Sbjct: 2397 ASLQRLNVTITRAKYSLFILGHLRTL-RENDHWNQLIEDAQKR 2438
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 32/123 (26%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1950 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDE 2009
Query: 93 LAARVVKLVKESVERDCRDALFFPLGDILL--LG-----NNE--RLKVDSGVEEIYLDYR 143
L +++ KE +D R+ L GDI L LG NNE R +DS V ++R
Sbjct: 2010 LMKKIILEFKEKC-KDKRNPLGN-CGDINLVRLGPEKSINNEVLRFSLDSQV-----NHR 2062
Query: 144 VKR 146
+K+
Sbjct: 2063 MKK 2065
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 70/354 (19%)
Query: 299 LLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLEDLLKSFCLKRASLFLSTASSSYMLH 358
L +++ SE H+ ++KL E +++D++ S + + LST S++ +
Sbjct: 333 LENEKISEIHYKIKKL-------------ENKIVKDIINS-----SDIILSTNSTA-AIE 373
Query: 359 SVAMEPLNFLVIDEAAQLKESESTIP---LQLSGIKHAVLFGDECQLPAMVESKVSNEAC 415
+ N +++DEA+Q +TIP + LS + +L GD QLP + +S +A
Sbjct: 374 EIVRTKFNVVIVDEASQ-----ATIPSILIPLSKARRFILAGDHKQLPPTI---ISKKAH 425
Query: 416 F-GRSLFERL--SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVR-------- 464
F ++LFE L Y S LL++QYRM+ + FPN FY ++ S+V
Sbjct: 426 FLEKTLFEELIKKYPNKS-SLLNVQYRMNSFLMKFPNLEFYNGNLKSDSSVDNINLDEII 484
Query: 465 --------KRSYEKRFLHGPMYGPYSFI---NVFGGREEFIE--HSCRNMVEVSVVMKIL 511
K S ++ LH + P FI N+ E+ ++ S N E + I
Sbjct: 485 DLEELSRLKESDVEKQLHNNL-KPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIA 543
Query: 512 LNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDL 571
I+ K+ IGI+SPY+ QV IQ+K+ ++V S+DGFQG E+++
Sbjct: 544 KFYLGTGINPKD---IGIISPYADQVNLIQDKI----------PIEVKSVDGFQGREKEI 590
Query: 572 IIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALV 625
IIISTVRSN IGFL + +R+NVA+TRA+ L ++GN TL + S + L+
Sbjct: 591 IIISTVRSNKNKDIGFLKDLRRLNVAITRAKRKLIVIGNKNTL-KGNSTYSKLI 643
>gi|115447959|ref|NP_001047759.1| Os02g0684200 [Oryza sativa Japonica Group]
gi|50251935|dbj|BAD27871.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|113537290|dbj|BAF09673.1| Os02g0684200 [Oryza sativa Japonica Group]
Length = 462
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVILLQMKFRTLVCTPTN 87
LN SQ AVL C+ M+ ++++LIWGPPGTGKTKT+S LL +L RTL C PTN
Sbjct: 265 LNKSQKVAVLDCVSAMQ-QRSSSVRLIWGPPGTGKTKTISTLLWAMLVKNHRTLTCAPTN 323
Query: 88 VAIKELAARVVKLVKESVERDCRDALFFPLGDILLLGNNERLKVDSGVEEIYLDYRVKRL 147
A+ E+A+RV+ L+++ + A F L D++L GN +R+ VD + +I+L+ R +RL
Sbjct: 324 TAVVEVASRVLNLLEDPSAGSGK-ACF--LSDVVLFGNEDRMNVDGNLTKIFLEKRARRL 380
Query: 148 ADCFAPLTGWSHCFASMVDFLDNCVSLYHTYIDNESMKQSEDI 190
C +P +GW H +SM+ L+ + Y +Y++ + ED+
Sbjct: 381 QKCLSPGSGWVHSLSSMIRILEQPLVQYDSYVEQIEREIEEDL 423
>gi|255718735|ref|XP_002555648.1| KLTH0G14190p [Lachancea thermotolerans]
gi|238937032|emb|CAR25211.1| KLTH0G14190p [Lachancea thermotolerans CBS 6340]
Length = 1083
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 167/364 (45%), Gaps = 57/364 (15%)
Query: 323 LPSAVEKDLLEDLLKS------FCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQL 376
+P V K+ LL + + +A + +T +S A+ L +++DE+ Q
Sbjct: 730 VPGLVSKNQYNKLLSTQNAISDRYIAQAQIIFTTNIASGGRQLKAIRELPAVIMDESTQS 789
Query: 377 KESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYLG-YSK-HLL 434
E + +PL L GIK V GDE QL S SN SLFER+ G Y K H+L
Sbjct: 790 SEVSTLVPLSLPGIKRFVFVGDEKQL-----SSFSNVPQLEMSLFERILTNGTYEKPHML 844
Query: 435 SIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFI 494
QYRMHP+IS FP + FYE K++D T + + G Y P F G E +
Sbjct: 845 DTQYRMHPAISEFPIAKFYEGKLKDGVTAEDKKWP-----GISY-PLFFYQCNQGSENKV 898
Query: 495 EHSCRNMVEVSV-----VMKILLNLYKAWIDSKEKL-SIGIVSPYSAQVVAIQEKL-GSK 547
+S R M + IL L+K ++ K IG+++PYS+Q I E L
Sbjct: 899 FNSKRGMRGFTYNNAHEAEYILAVLHKLILEKGVKTDEIGVITPYSSQRDLISEMLVKDP 958
Query: 548 YVNSAGFA-------------------------------VKVMSIDGFQGGEEDLIIIST 576
VN +G A V V ++D FQG E+ ++ S
Sbjct: 959 IVNPSGKAMEQEMDKDDALGGGESVSGSANKVTINIVNGVYVATVDSFQGHEKSFVLFSC 1018
Query: 577 VRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
VR+N+ IGF+ + +R+NVALTRA++ L ++GN + + +W ++ ++ F
Sbjct: 1019 VRNNSENKIGFVKDRRRMNVALTRAKNGLVVVGNKDVMKKGDQLWADYINYLEEKEVIFE 1078
Query: 637 ADDD 640
D+
Sbjct: 1079 TLDN 1082
>gi|58261218|ref|XP_568019.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57230101|gb|AAW46502.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 952
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 32/283 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P+ FL DEA+ E + +PL + G H + GD QLP ++ S+ ++ SLFER
Sbjct: 636 PIVFL--DEASMATEPLTLLPL-MKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFER 692
Query: 424 LSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY-EKRFL--HGPMYG 479
L + +L QYRMHPS++ F + FY + +++ + +R E FL P+
Sbjct: 693 LIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIPD 752
Query: 480 PYSF-INVFGGREE--FIEHS---------CRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
P + + ++G + F+ HS N E +++ ++ +L D K I
Sbjct: 753 PSTGELRLWGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGS-QI 811
Query: 528 GIVSPYSAQVVAIQEKL-GSKYVNSAGFA-----------VKVMSIDGFQGGEEDLIIIS 575
GI++PY Q+ + E L S+ +S V++ ++DGF+G E+++II S
Sbjct: 812 GIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIFS 871
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
TVRSN GG IGFL + +RVNV LTRAR L ++GN TL R K
Sbjct: 872 TVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAK 914
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 40 LRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCTPTNVAIKELAAR 96
LR M + L+ GPPGTGKT+ + + +L Q+ LVC TNVA+ L A
Sbjct: 464 LRAMGMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAVDNLLAG 523
Query: 97 VVK 99
+VK
Sbjct: 524 MVK 526
>gi|410076224|ref|XP_003955694.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
gi|372462277|emb|CCF56559.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
Length = 1164
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 158/335 (47%), Gaps = 50/335 (14%)
Query: 341 LKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDEC 400
+ +A + +T ++ A++ + +++DE+ Q E+ + +PL L GIK V GDE
Sbjct: 836 VSQAQIIFTTNITAGGRQLKAIKEVPVVIMDESTQSSEASTLVPLSLPGIKSFVFVGDEK 895
Query: 401 QLPAMVESKVSNEACFGRSLFERLSYLGYSKH--LLSIQYRMHPSISCFPNSYFYENKIR 458
QL S SN SLFER+ G K +L +QYRMHP IS FP FY+N+++
Sbjct: 896 QL-----SSFSNVPQLELSLFERVLLNGSYKSPIMLDVQYRMHPKISEFPILKFYKNQLK 950
Query: 459 DSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVV-----MKILLN 513
D T R++ G Y P F G+E + N+ ++ + +I+
Sbjct: 951 DGVTEVDRAWP-----GITY-PLFFYQCDRGKESVTVNRRNNLSALTYINQYECQEIVKI 1004
Query: 514 LYKAWIDSKEKLS-IGIVSPYSAQ------------VVAIQEKLGSKYVNSAGF------ 554
LYK ++ L IGI++PYSAQ ++ + K + + A F
Sbjct: 1005 LYKLILEKNVSLDEIGIITPYSAQRDLLSKVLLEDDIINPEGKAMEQQNDEAEFLNKNNV 1064
Query: 555 -------------AVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRA 601
+ V ++D FQG E++ II S VR+N IGFL + +R+NVALTRA
Sbjct: 1065 DYSVQSHVVNIINGLHVATVDSFQGHEKNFIIFSCVRNNAENKIGFLRDERRLNVALTRA 1124
Query: 602 RHCLWILGNARTLTRKKSVWEALVHDANARQCFFN 636
R+ L I+GN L +W V + FN
Sbjct: 1125 RNGLIIVGNKHVLKAGDKLWREFVTFLEDKGVIFN 1159
>gi|303236249|ref|ZP_07322845.1| putative DNA helicase [Prevotella disiens FB035-09AN]
gi|302483563|gb|EFL46562.1| putative DNA helicase [Prevotella disiens FB035-09AN]
Length = 641
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 22/314 (7%)
Query: 332 LEDLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSG 389
LE + S A + ST S +S ME F L IDEAAQ E+ IP++ +
Sbjct: 332 LEIRINSQLFGEARVIASTLVGS---NSRIMEGQKFSTLFIDEAAQALEAACWIPIRRAS 388
Query: 390 IKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL-SYLGYSKHLLSIQYRMHPSISCFP 448
+ GD CQLP V+S + +A G++L ER+ LL +QYRM+ I F
Sbjct: 389 --RVIFAGDHCQLPPTVKSIAALKAGLGKTLMERIVENKPEVVTLLKVQYRMNEQIMRFS 446
Query: 449 NSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGG----REEFIEHSCR--NMV 502
+ +FY ++ + ++ R + H ++ S I V E+F+ S N
Sbjct: 447 SDWFYHGEVESAPQIKYRGILD-YDHPMLWLDTSEIEVGNDEPTFHEQFVGESYGRINKG 505
Query: 503 EVSVVMKILLNLYKAWIDSK---EKLSIGIVSPYSAQVVAIQEKLGSK-YVNSAGFAVKV 558
E + +K L + + + E++ +G++SPY AQV ++ + + + + V
Sbjct: 506 EAELTLKTLQDYFTKIGKQRILDERIDVGVISPYRAQVQYLRRLIKKREFFKPYRALISV 565
Query: 559 MSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRK- 617
++DGFQG E D+I+IS VR+N G IGFL + +R+NVA+TRAR L ILGNA T+++
Sbjct: 566 NTVDGFQGQERDVILISMVRANENGEIGFLKDLRRMNVAITRARMKLIILGNAATMSQHP 625
Query: 618 --KSVWEALVHDAN 629
K ++E + H N
Sbjct: 626 FYKRLFEYIQHINN 639
>gi|403362863|gb|EJY81167.1| hypothetical protein OXYTRI_21438 [Oxytricha trifallax]
Length = 717
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 206/414 (49%), Gaps = 71/414 (17%)
Query: 215 LEFVRDRFKCIAAPLRSCIFNFCTRIPKCYIGKDNFHVMATLISLLDSFETLLFEDNLVS 274
++F++D+F + + R +F DN + L L E F+++ +
Sbjct: 335 IQFLKDKFVRVFSDTREDVFKMTL---------DNLQPFSLLHKALFYGEQYYFDEDAIY 385
Query: 275 EELEELLSHSVDEGLSKSIVGIKYLLHKRRSECHFVLRKLQSSFNELNLPSAVEKDLLED 334
E + + G++K GIK++ + R + FNE KD +E
Sbjct: 386 EPFKNM-------GVNKH--GIKFIKNTR----------IDKFFNE--------KDRVEQ 418
Query: 335 LLKSFCLKRASLFLSTASSSYMLHSVAMEPLNF--LVIDEAAQLKESESTIPLQLSGIKH 392
++ LK+ + L T + S + + ++ + F ++IDEA Q KE E+ P+ + +
Sbjct: 419 MI----LKKIPIVLCTLAGS---NDIRLKHMTFQKVIIDEATQAKEFETLKPMLHA--ET 469
Query: 393 AVLFGDECQL-PAMVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSY 451
AVL GD QL P +E K+ +SLFERL LL IQYR HP+I N+
Sbjct: 470 AVLIGDHKQLGPTYLEYKIDGP----QSLFERLVMNKNEYSLLKIQYRSHPAIVAPLNNI 525
Query: 452 FYENKIRDSSTVR-KRSYEKRFLHGPMYGPYSFINVFG---GREEFIEHSCRNMVEVSVV 507
FY+N++ + + K F++ M P FI+ G G ++ E S N E+ +V
Sbjct: 526 FYDNRLESQYYIMDAETRTKAFINDSM--PIMFIDTKGCCIGESKY-ESSWYNQYEIDLV 582
Query: 508 MKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGG 567
K+ + ID + IGIV+PY Q+ ++E+L ++ ++ G S+D +QG
Sbjct: 583 QKVFEQMRFIGIDQGQ---IGIVTPYIGQLNKLKEQLHNQ-IDPNGIG----SVDSWQGR 634
Query: 568 EEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVW 621
E D IISTVR+ + +GF+ + R+NVAL+RARH + I+GN++ L++ ++ W
Sbjct: 635 ETDYSIISTVRTRH---LGFVKDPNRMNVALSRARHGMIIIGNSQCLSQDEN-W 684
>gi|71012553|ref|XP_758509.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
gi|46098167|gb|EAK83400.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
Length = 1604
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 149/286 (52%), Gaps = 43/286 (15%)
Query: 365 LNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERL 424
L + DEA+ E S +PL + G +H + GD QLP +V S + +A RSLFERL
Sbjct: 1249 LPVVFFDEASMATEPVSLVPL-MKGCRHLSIIGDHKQLPPVVTSAEAKKAGLSRSLFERL 1307
Query: 425 --SYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPY- 481
S +L++Q+RMHP+++ F N FY+ +++ + L P+ Y
Sbjct: 1308 IQSRSSIPSIMLNVQFRMHPTLAEFANQTFYDGALQNGTGTE--------LIAPVASSYW 1359
Query: 482 --------------SFINVFGGREEFIEHSC--RNMVEVSVVMKILLNLYKAWIDSKEKL 525
FI+ GRE E+S RN E +V+ ++ +L + D
Sbjct: 1360 PSCAGVAKQDTQRLCFID-HKGRETKAENSSSLRNASEARIVLDVVTDLLRQNPDLTGD- 1417
Query: 526 SIGIVSPYSAQVVAIQEKLGSKYV----NSAGF---------AVKVMSIDGFQGGEEDLI 572
IG+V+PY+ Q V +++ L ++ +AG + V ++DGF+G E+ +I
Sbjct: 1418 DIGVVTPYAGQQVLLEKMLHNEASLSRQQAAGILGTRSSELGNIDVHTVDGFEGREKKVI 1477
Query: 573 IISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
+ STVR+N G +GFL++ +R+NVALTRA+ L+++GN TL R +
Sbjct: 1478 LFSTVRTNAQGYVGFLADGRRLNVALTRAQSALFLIGNIDTLKRAQ 1523
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCT 84
LN +Q QAV LR+ + LI GPPGTGKT+T+ + +L Q+ ++
Sbjct: 1021 LNSTQTQAVAMMLRER-------VSLIQGPPGTGKTRTIVTAIKLLKQDFQVPHPIMLAA 1073
Query: 85 PTNVAIKELAARVVK 99
TNVA+ LA +K
Sbjct: 1074 HTNVAVDNLADGCIK 1088
>gi|211827336|gb|AAH32600.2| SETX protein [Homo sapiens]
Length = 930
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 427 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 485
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 486 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 541
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 542 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 597
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 598 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 655
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 656 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 705
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 209 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 268
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 269 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 318
>gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 325 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 383
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 384 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 439
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 440 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 495
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 496 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 553
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 554 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 603
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 107 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 166
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 167 LMKKIILEFKEK----CKDK-KNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 216
>gi|119608404|gb|EAW87998.1| senataxin, isoform CRA_b [Homo sapiens]
gi|119608405|gb|EAW87999.1| senataxin, isoform CRA_b [Homo sapiens]
Length = 1776
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 1273 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 1331
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 1332 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 1387
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 1388 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 1443
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 1444 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 1501
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 1502 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 1551
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 1055 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 1114
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 1115 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 1164
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 60/315 (19%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIK-----------------------HAVLFGDECQLPA 404
++IDE+ Q E E +P+ L + +L GD CQL
Sbjct: 627 ILIDESTQATEPECMVPVVLGAKQVHTHTHTRAHNNRPCFSYPPSCPQLILVGDHCQLGP 686
Query: 405 MVESKVSNEACFGRSLFERLSYLGYSKHLLSIQYRMHPSISCFPNSYFYENKIRD----- 459
+V K + +A +SLFERL LG L +QYRMHP++S FP++ FYE +++
Sbjct: 687 VVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAG 746
Query: 460 ---------SSTVRKRSYEK--------RFLHG-----PMYGPYSFINVFGGREEFIEH- 496
++TV+ + + R G P F V G+EE
Sbjct: 747 WISLNALEMNATVKSEPHSQIGCLLAGDRIKKGFDFQWPQPEKPMFFYVTQGQEEIASSG 806
Query: 497 -SCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQ---VVAIQEKLGSKYVNSA 552
S N E + V KI L KA + IGI++PY Q +V + GS +
Sbjct: 807 TSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQFSGSLHTKLY 863
Query: 553 GFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNAR 612
V++ S+D FQG E+D II+S VR+N IGFL++ +R+NVALTRA++ + I+GN +
Sbjct: 864 Q-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPK 922
Query: 613 TLTRKKSVWEALVHD 627
L+ K+ +W L+++
Sbjct: 923 ALS-KQPLWNNLLNN 936
Score = 47.0 bits (110), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 28 LNDSQAQAVLSCLRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL-LQMKFRTLVCTPT 86
LN SQ AV + L++ + LI GPPGTGKT T + ++ L Q LVC P+
Sbjct: 465 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPS 517
Query: 87 NVAIKELAARVVK 99
N+A+ +L ++ K
Sbjct: 518 NIAVDQLTEKIHK 530
>gi|134115759|ref|XP_773593.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 952
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 32/283 (11%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P+ FL DEA+ E + +PL + G H + GD QLP ++ S+ ++ SLFER
Sbjct: 636 PIVFL--DEASMATEPLTLLPL-MKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFER 692
Query: 424 LSY-LGYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY-EKRFL--HGPMYG 479
L + +L QYRMHPS++ F + FY + +++ + +R E FL P+
Sbjct: 693 LIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIPD 752
Query: 480 PYSFINVFGGREE---FIEHS---------CRNMVEVSVVMKILLNLYKAWIDSKEKLSI 527
P + G + F+ HS N E +++ ++ +L D K I
Sbjct: 753 PSTGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGS-QI 811
Query: 528 GIVSPYSAQVVAIQEKL-GSKYVNSAGFA-----------VKVMSIDGFQGGEEDLIIIS 575
GI++PY Q+ + E L S+ +S V++ ++DGF+G E+++II S
Sbjct: 812 GIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIFS 871
Query: 576 TVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKK 618
TVRSN GG IGFL + +RVNV LTRAR L ++GN TL R K
Sbjct: 872 TVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAK 914
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 40 LRQMRCDHKATIQLIWGPPGTGKTKTVSMLLVIL---LQMKFRTLVCTPTNVAIKELAAR 96
LR M + L+ GPPGTGKT+ + + +L Q+ LVC TNVA+ L A
Sbjct: 464 LRAMGMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAVDNLLAG 523
Query: 97 VVK 99
+VK
Sbjct: 524 MVK 526
>gi|294506246|ref|YP_003570304.1| DNA helicase [Salinibacter ruber M8]
gi|294342574|emb|CBH23352.1| Putative DNA helicase [Salinibacter ruber M8]
Length = 766
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 157/316 (49%), Gaps = 48/316 (15%)
Query: 326 AVEKDLLEDLLKSFCLKRASLFLSTASS--SYMLHSVAMEPLNFLVIDEAAQLKESESTI 383
A+E++ ++++L++ A + ST S+ S +L + LVIDEA Q I
Sbjct: 450 ALEQEAIDEVLRA-----ADVVCSTNSTAGSDLLDG---HTFDTLVIDEATQATAPSCWI 501
Query: 384 PLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSY--------LGYSKHLLS 435
P+ + + AVL GD QLP ++++ + R+LFERL++ G + LL
Sbjct: 502 PM--THARRAVLVGDHKQLPPTIQNQEAARRGLRRTLFERLAHHHETAPESPGSIRSLLR 559
Query: 436 IQYRMHPSISCFPNSYFYENKIRDSSTVRKRSY-------------EKRFLHGPMYGPYS 482
QYRMH +I FPN FY+ ++ T R R+ E+R + P P
Sbjct: 560 RQYRMHETIMGFPNRTFYDGRLEADDTARHRTLAGLGVPEHALPADERRAILDP-EAPLV 618
Query: 483 FINVFG----GREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVV 538
F++ G + HS N E ++ ++ L +A + +I ++SPY QV
Sbjct: 619 FVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALLEAGMAPS---AIAVISPYDDQVD 675
Query: 539 AIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVAL 598
I L A + ++DGFQG E++++++S VRSN+ G+IGFL +R NVA+
Sbjct: 676 RIDRAL-------APDGPETDTVDGFQGREKEIVLLSLVRSNDRGAIGFLDEPRRFNVAV 728
Query: 599 TRARHCLWILGNARTL 614
TRA ++G+A T+
Sbjct: 729 TRAERKAVVVGDASTV 744
>gi|77415498|gb|AAI06018.1| SETX protein, partial [Homo sapiens]
Length = 867
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 364 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 422
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 423 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 478
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 479 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 534
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 535 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 592
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 593 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 642
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 146 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 205
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 206 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 255
>gi|284167544|ref|YP_003405822.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
gi|284017199|gb|ADB63149.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
Length = 752
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 145/285 (50%), Gaps = 32/285 (11%)
Query: 340 CLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDE 399
C RA + +T SS+ L + LV+DEA Q + S IPL + VL GD
Sbjct: 451 CDGRADVVAATNSSAATLD----REFDVLVLDEATQATCTASCIPLARA--NKVVLAGDH 504
Query: 400 CQLPAMVESKVSNEACFGRSLFERLS-----YLGYSKHLLSIQYRMHPSISCFPNSYFYE 454
QLP ++ E+ G SLFE L Y G L + QYRMH I+ F N FY+
Sbjct: 505 KQLPPFSATEDPPESAAGMSLFEHLYADGGVYEGVGVQLRT-QYRMHRDIAWFSNRRFYD 563
Query: 455 NKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNL 514
+R V S E + P Y GG EE I+HS RN E +V ++ L
Sbjct: 564 RALRQGRDVT--SLEDQ----PALVGYDV----GGSEETIDHSKRNDAEARLVAHVVDEL 613
Query: 515 -YKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLII 573
+A +++ + IG+++PY+AQV A++ KL ++ G V V +ID FQG E+ I+
Sbjct: 614 RTEAGLEASD---IGVITPYTAQVDAVRTKLTTRL--ERGREVTVDTIDSFQGSEKVAIV 668
Query: 574 ISTVRSNNGGSIGF----LSNSKRVNVALTRARHCLWILGNARTL 614
IS VRSN G +GF L +R+NVA+TRA I+G+ TL
Sbjct: 669 ISLVRSNADGEVGFLDRPLDGPRRLNVAMTRAERFCAIVGDWYTL 713
>gi|50603852|gb|AAH78166.1| SETX protein, partial [Homo sapiens]
Length = 917
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 27/291 (9%)
Query: 364 PLNFLVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFER 423
P + +++DEA Q E E+ PL + +L GD QLP V S + E + +S+ R
Sbjct: 414 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 472
Query: 424 LSYL--GYSKH---------LLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRF 472
L +H L++QYRMHP I FP++Y Y ++ +++ R
Sbjct: 473 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK----TNRQTEAIRC 528
Query: 473 LHGPMYGPYSFINVFGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDSKEKLS---IGI 529
+ PY +V G E S N+ E+ +VM+I+ K D ++ +S IGI
Sbjct: 529 SSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII----KLIKDKRKDVSFRNIGI 584
Query: 530 VSPYSAQVVAIQEKLGSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNN-GGSIGFL 588
++ Y AQ IQ+ L ++ + G A +V ++D FQG ++D +I++ VR+N+ GSIGFL
Sbjct: 585 ITHYKAQKTMIQKDLDKEF-DRKGPA-EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFL 642
Query: 589 SNSKRVNVALTRARHCLWILGNARTLTRKKSVWEALVHDANARQCFFNADD 639
++ +R+NV +TRA++ L+ILG+ RTL + W L+ DA R D
Sbjct: 643 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD 692
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 49 ATIQLIWGPPGTGKTKTVSMLLVILLQ----------------MKFRTLVCTPTNVAIKE 92
A I LI GPPGTGK+KT+ LL LL + R LVC P+N A+ E
Sbjct: 196 AKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDE 255
Query: 93 LAARVVKLVKESVERDCRDALFFPL---GDILLLGNNERLKVDSGVEEIYLDYRV 144
L +++ KE C+D PL GDI L+ ++S V + LD +V
Sbjct: 256 LMKKIILEFKEK----CKDKK-NPLGNCGDINLVRLGPEKSINSEVLKFSLDSQV 305
>gi|412991544|emb|CCO16389.1| tRNA-splicing endonuclease, putative [Bathycoccus prasinos]
Length = 909
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 155/324 (47%), Gaps = 31/324 (9%)
Query: 334 DLLKSFCLKRASLFLSTASSSYMLHSVAMEPLNFLVIDEAAQLKESESTIPLQLSGIKHA 393
D+L L A L T S L+ + L++DEAA E E + + K
Sbjct: 597 DVLAKAVLSNARLCFCTLGSCGGLYHSGAADCDVLIVDEAANCLEGEILLAFARNP-KRC 655
Query: 394 VLFGDECQLPAMVESKVSNEACFGRSLFERL--SYLGYSKH----LLSIQYRMHPSISCF 447
+L GD QLPAM S+ + +SL ERL Y G +L QYRMHP I +
Sbjct: 656 LLIGDPQQLPAMCFSRDVQRLGYNKSLMERLFACYGGDQNEAMCTMLKTQYRMHPEICAW 715
Query: 448 PNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVFGGREEFIEHSCR-NMVEVSV 506
P+ FY K++++ V + PYS +NV G+ S N E +
Sbjct: 716 PSERFYGGKLQNAECVENSNNTM---------PYSIVNVHSGKHRVSSSSSISNDREAEI 766
Query: 507 VMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVM--SIDGF 564
+ ++L L K+ L IGI++ Y+AQV I + +K V AG V ++D F
Sbjct: 767 AVDLVLKL------RKKALKIGIITFYTAQVRLIANLMRAKNVVPAGSDDDVFASTVDSF 820
Query: 565 QGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSVWE-- 622
QG E D+II+S VR++ S GFLS+S+R+NV+LTRA+ L +L NA L E
Sbjct: 821 QGSEADVIILSCVRTSKT-SAGFLSDSRRLNVSLTRAKKKLIVLCNADALAGGGETLEML 879
Query: 623 ---ALVHDANARQCFFNADDDKDL 643
+L+ +A R F+ + K L
Sbjct: 880 DLKSLIENAKTRNVLFSESEPKIL 903
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 21/261 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL + G K VL GD QL + K +A F +SLFERL +
Sbjct: 493 VLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISI 551
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G ++LS+QYRM + +P+ FY ++ K F + P +F V
Sbjct: 552 GVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG--------KNFCRFDLGIPVNFFYVC 603
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL- 544
GREE N E I+ +L+K + + IG+++PY Q I ++
Sbjct: 604 YGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILNRIF 660
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
G++ N +++ ++DGFQG E+D II+S VRSN IGF+ + +R+NV LTRA+H
Sbjct: 661 GAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHG 715
Query: 605 LWILGNARTLTRKKSVWEALV 625
L I+GN TL K +W L+
Sbjct: 716 LVIIGNPMTLM-KHDMWGNLL 735
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 21/261 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
++IDEA Q E S IPL + G K VL GD QL + K +A F +SLFERL +
Sbjct: 499 VLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISI 557
Query: 428 GYSKHLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINVF 487
G ++LS+QYRM + +P+ FY ++ K F + P +F V
Sbjct: 558 GVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG--------KNFCRFDLGIPVNFFYVC 609
Query: 488 GGREEFIEHSCR--NMVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKL- 544
GREE N E I+ +L+K + + IG+++PY Q I ++
Sbjct: 610 YGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILNRIF 666
Query: 545 GSKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHC 604
G++ N +++ ++DGFQG E+D II+S VRSN IGF+ + +R+NV LTRA+H
Sbjct: 667 GAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHG 721
Query: 605 LWILGNARTLTRKKSVWEALV 625
L I+GN TL K +W L+
Sbjct: 722 LVIIGNPMTLM-KHDMWGNLL 741
>gi|423220918|ref|ZP_17207412.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
gi|392622396|gb|EIY16524.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
Length = 647
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 21/260 (8%)
Query: 368 LVIDEAAQLKESESTIPLQLSGIKHAVLFGDECQLPAMVESKVSNEACFGRSLFERLSYL 427
L IDEAAQ E+ I ++ + +L GD CQLP ++ + + +L E++ +
Sbjct: 381 LFIDEAAQALEAACWIAIRKA--DRVILAGDHCQLPPTIKCIEAARSGLDHTLMEKVVHK 438
Query: 428 GYSK-HLLSIQYRMHPSISCFPNSYFYENKIRDSSTVRKRSYEKRFLHGPMYGPYSFINV 486
S LL +QYRMH SI FP+ +FY ++ + VR RS P ++I+
Sbjct: 439 KPSAVSLLKMQYRMHESIMRFPSEWFYHGELEAAPEVRYRSILD------FDTPMNWIDT 492
Query: 487 --FGGREEFIEHSCRNMVEVSVVMKILLNLYKAWIDS-------KEKLSIGIVSPYSAQV 537
EEF+ S + + +LL +A+I+ EK+ G++SPY AQV
Sbjct: 493 SEMDFHEEFVGESFGRINKQEA--NLLLQELEAYINRIGKARILDEKIDFGLISPYKAQV 550
Query: 538 VAIQEKLG-SKYVNSAGFAVKVMSIDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNV 596
++ K+ S ++ + V ++DGFQG E D+I IS VR+N G IGFL++ +R+NV
Sbjct: 551 QYLRSKIKVSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 610
Query: 597 ALTRARHCLWILGNARTLTR 616
A+TRAR L ILG+A TLT+
Sbjct: 611 AITRARMKLVILGDAVTLTK 630
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,505,882,239
Number of Sequences: 23463169
Number of extensions: 635751138
Number of successful extensions: 1964544
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2786
Number of HSP's successfully gapped in prelim test: 3491
Number of HSP's that attempted gapping in prelim test: 1939476
Number of HSP's gapped (non-prelim): 16550
length of query: 1044
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 891
effective length of database: 8,769,330,510
effective search space: 7813473484410
effective search space used: 7813473484410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)