Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>041980
MSVLWEKSETWRWIVRKTRDSKPFFLAFATVCGVVPGVVGYCVMQATNSRNPQLEAELRR
TARPDSLMMGQVNRERLAEYLGELQRKEDTNDRYVAALRGETLIRKPYERIQPIPKENTT
VADRPQEK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041980
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2206370 - symbol:AT1G79390 "AT1G79390" species...   421  1.8e-39   1


>TAIR|locus:2206370 [details] [associations]
            symbol:AT1G79390 "AT1G79390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007202
            EMBL:AF324674 EMBL:AF326893 EMBL:AF339710 EMBL:AK227685
            IPI:IPI00537906 PIR:H96824 RefSeq:NP_565207.1 UniGene:At.48394
            UniGene:At.70225 IntAct:Q9SAK9 STRING:Q9SAK9 PaxDb:Q9SAK9
            PRIDE:Q9SAK9 EnsemblPlants:AT1G79390.1 GeneID:844277
            KEGG:ath:AT1G79390 TAIR:At1g79390 eggNOG:NOG261156
            HOGENOM:HOG000239084 InParanoid:Q9SAK9 OMA:SILWEKS PhylomeDB:Q9SAK9
            ProtClustDB:CLSN2689324 ArrayExpress:Q9SAK9 Genevestigator:Q9SAK9
            Uniprot:Q9SAK9
        Length = 126

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 80/126 (63%), Positives = 97/126 (76%)

Query:     1 MSVLWEKSETWRWIVRKTRDSKPFFLAFATXXXXXXXXXXXXXMQATNSRNPQLEAELRR 60
             MS ++EKS TWRW+V KTRDS+ FF  FA              MQ TNS NP+LEA LR+
Sbjct:     1 MSFMYEKSNTWRWLVMKTRDSRSFFFTFAALCGVIPGVIGYGVMQVTNSSNPELEARLRK 60

Query:    61 TARPDSLMMGQVNRERLAEYLGELQRKEDTNDRYVAALRGETLIRKPYERIQPIPKENTT 120
             +ARPD+LMMG+VN+ERLAEYLGEL++K+DTNDRYVAALRGETL RKPY+RIQP+PK + T
Sbjct:    61 SARPDTLMMGKVNQERLAEYLGELKQKQDTNDRYVAALRGETLTRKPYQRIQPMPKPDDT 120

Query:   121 VADRPQ 126
             V  + Q
Sbjct:   121 VTTKTQ 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       115   0.00091  102 3  11 22  0.49    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  542 (58 KB)
  Total size of DFA:  122 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.91u 0.10s 13.01t   Elapsed:  00:00:01
  Total cpu time:  12.91u 0.10s 13.01t   Elapsed:  00:00:01
  Start:  Sat May 11 14:52:41 2013   End:  Sat May 11 14:52:42 2013

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