Query 041981
Match_columns 379
No_of_seqs 260 out of 727
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 22:05:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eqn_A Glucan 1,3-beta-glucosi 100.0 2.7E-33 9.1E-38 298.0 26.7 227 80-351 46-297 (758)
2 3jur_A EXO-poly-alpha-D-galact 99.9 5.1E-22 1.7E-26 203.0 19.7 274 80-375 24-412 (448)
3 1rmg_A Rgase A, rhamnogalactur 99.9 6.2E-21 2.1E-25 193.5 25.7 202 80-314 17-253 (422)
4 3gq8_A Preneck appendage prote 99.9 5.1E-21 1.8E-25 200.8 25.5 240 81-353 20-344 (609)
5 2pyg_A Poly(beta-D-mannuronate 99.9 4.3E-21 1.5E-25 189.1 22.2 265 83-375 2-332 (377)
6 3gqn_A Preneck appendage prote 99.9 2.5E-20 8.7E-25 198.8 26.3 243 81-353 20-344 (772)
7 2uvf_A Exopolygalacturonase; G 99.8 7.9E-19 2.7E-23 185.4 21.9 273 80-376 153-564 (608)
8 1h80_A IOTA-carrageenase; hydr 99.8 3.1E-18 1.1E-22 175.8 23.2 213 80-327 18-267 (464)
9 1bhe_A PEHA, polygalacturonase 99.7 5.7E-15 2E-19 147.2 25.6 216 82-328 13-301 (376)
10 2x6w_A Tail spike protein; vir 99.6 4.6E-15 1.6E-19 155.3 18.7 167 80-280 48-287 (600)
11 2vbk_A Tailspike-protein; vira 99.6 1.3E-14 4.5E-19 146.7 14.0 255 80-351 48-379 (514)
12 3eqn_A Glucan 1,3-beta-glucosi 99.5 3.8E-12 1.3E-16 136.1 23.7 174 80-276 397-613 (758)
13 1hg8_A Endopolygalacturonase; 99.4 5.5E-12 1.9E-16 124.9 19.9 198 99-328 7-264 (349)
14 2iq7_A Endopolygalacturonase; 99.4 2.2E-11 7.4E-16 120.0 19.6 198 98-328 6-252 (339)
15 1nhc_A Polygalacturonase I; be 99.4 1.9E-11 6.4E-16 120.3 18.4 184 98-315 6-233 (336)
16 1ia5_A Polygalacturonase; glyc 99.3 1E-10 3.4E-15 115.3 20.3 198 98-328 10-256 (339)
17 1czf_A Polygalacturonase II; b 99.3 1.5E-10 5E-15 115.3 19.1 184 100-316 35-260 (362)
18 2inu_A Insulin fructotransfera 99.2 2.2E-10 7.7E-15 115.3 17.4 239 80-352 11-300 (410)
19 1k5c_A Endopolygalacturonase; 99.1 1.3E-09 4.5E-14 107.3 17.5 181 100-315 8-229 (335)
20 1x0c_A Isopullulanase; glycosi 99.0 3.1E-10 1.1E-14 118.7 9.3 196 83-303 142-401 (549)
21 1ogo_X Dextranase; hydrolase, 98.9 4E-08 1.4E-12 103.2 16.8 82 206-303 350-439 (574)
22 1ru4_A Pectate lyase, PEL9A; p 98.3 6.9E-05 2.4E-09 75.4 21.5 249 80-359 13-301 (400)
23 1czf_A Polygalacturonase II; b 98.3 1.7E-05 6E-10 78.7 16.3 101 188-303 157-276 (362)
24 1dbg_A Chondroitinase B; beta 98.2 0.00015 5.1E-09 75.2 22.1 176 189-377 127-351 (506)
25 2iq7_A Endopolygalacturonase; 98.2 4.6E-05 1.6E-09 74.8 16.1 99 189-302 133-250 (339)
26 1ogo_X Dextranase; hydrolase, 98.1 0.00024 8.3E-09 74.7 21.4 226 127-375 230-512 (574)
27 1ia5_A Polygalacturonase; glyc 98.1 9.4E-05 3.2E-09 72.6 16.4 99 189-302 137-254 (339)
28 1bhe_A PEHA, polygalacturonase 98.0 0.00013 4.3E-09 72.5 16.0 87 188-289 183-283 (376)
29 1rmg_A Rgase A, rhamnogalactur 97.9 0.00043 1.5E-08 70.0 18.5 98 189-302 160-269 (422)
30 2pyg_A Poly(beta-D-mannuronate 97.8 0.00027 9.4E-09 69.0 13.5 164 205-378 174-362 (377)
31 1hg8_A Endopolygalacturonase; 97.8 0.0004 1.4E-08 68.5 14.7 139 205-352 104-268 (349)
32 1nhc_A Polygalacturonase I; be 97.7 0.00036 1.2E-08 68.3 13.8 154 188-352 68-255 (336)
33 1gq8_A Pectinesterase; hydrola 97.4 0.012 3.9E-07 57.6 19.2 192 100-329 19-241 (319)
34 1k5c_A Endopolygalacturonase; 97.3 0.0039 1.3E-07 61.1 15.2 138 203-352 97-252 (335)
35 3jur_A EXO-poly-alpha-D-galact 97.3 0.0026 9E-08 64.8 13.7 142 202-353 189-353 (448)
36 1xg2_A Pectinesterase 1; prote 97.3 0.01 3.6E-07 57.9 17.3 191 101-329 16-237 (317)
37 2uvf_A Exopolygalacturonase; G 97.1 0.0038 1.3E-07 65.8 13.4 159 202-375 330-531 (608)
38 2x3h_A K5 lyase, K5A lyase; ba 96.7 0.29 1E-05 47.9 21.5 60 81-163 62-123 (542)
39 2nsp_A Pectinesterase A; micha 96.6 0.11 3.8E-06 51.1 18.0 126 101-248 19-174 (342)
40 3uw0_A Pectinesterase; right-h 96.5 0.17 5.8E-06 50.2 18.8 132 99-248 43-201 (364)
41 2inu_A Insulin fructotransfera 96.4 0.022 7.6E-07 57.4 12.1 133 204-353 185-339 (410)
42 3vmv_A Pectate lyase; polysacc 96.0 0.35 1.2E-05 47.3 17.6 142 203-351 94-249 (326)
43 1dbg_A Chondroitinase B; beta 95.8 0.071 2.4E-06 55.2 12.4 233 99-376 30-312 (506)
44 1idk_A Pectin lyase A; signal, 95.7 0.68 2.3E-05 45.8 18.7 137 203-356 123-284 (359)
45 1pxz_A Major pollen allergen J 95.6 0.18 6E-06 49.7 14.0 35 320-354 237-274 (346)
46 1ru4_A Pectate lyase, PEL9A; p 95.6 0.14 4.8E-06 51.3 13.2 129 205-352 109-269 (400)
47 1qcx_A Pectin lyase B; beta-he 95.5 1.2 4E-05 44.1 19.6 144 203-362 123-290 (359)
48 2qy1_A Pectate lyase II; GAG l 95.1 0.66 2.3E-05 45.3 15.9 158 205-371 87-269 (330)
49 1x0c_A Isopullulanase; glycosi 94.6 0.4 1.4E-05 49.9 13.9 105 209-328 290-402 (549)
50 3zsc_A Pectate trisaccharide-l 93.9 0.73 2.5E-05 45.3 13.2 59 189-248 92-162 (340)
51 1air_A Pectate lyase C, PELC; 93.7 1.5 5.2E-05 43.2 15.2 151 206-360 105-269 (353)
52 1pcl_A Pectate lyase E; lyase 93.5 1.3 4.5E-05 43.7 14.4 15 337-351 265-279 (355)
53 3gq8_A Preneck appendage prote 93.0 0.39 1.4E-05 50.7 10.1 79 272-351 186-274 (609)
54 1pe9_A Pectate lyase A; parall 92.0 4.6 0.00016 39.9 15.9 43 332-376 271-319 (361)
55 3zsc_A Pectate trisaccharide-l 91.7 0.67 2.3E-05 45.6 9.5 130 205-353 84-251 (340)
56 1vbl_A Pectate lyase 47; PL 47 91.4 2.4 8.2E-05 42.7 13.4 143 204-351 148-333 (416)
57 3gqn_A Preneck appendage prote 91.4 0.73 2.5E-05 49.9 9.9 59 186-244 104-192 (772)
58 1pxz_A Major pollen allergen J 90.9 1 3.6E-05 44.2 9.9 81 291-373 115-222 (346)
59 3ju4_A Endo-N-acetylneuraminid 89.3 0.13 4.6E-06 52.2 2.0 22 89-110 4-25 (670)
60 1idk_A Pectin lyase A; signal, 88.0 5.7 0.0002 39.1 12.7 134 227-375 124-278 (359)
61 2o04_A Pectate lyase, PL; hexa 87.9 5.7 0.0002 39.7 12.9 43 332-376 309-355 (399)
62 1h80_A IOTA-carrageenase; hydr 87.5 2.7 9.1E-05 42.9 10.3 79 210-302 173-271 (464)
63 1qcx_A Pectin lyase B; beta-he 84.4 13 0.00043 36.6 13.1 139 227-375 124-278 (359)
64 1pcl_A Pectate lyase E; lyase 84.2 4.6 0.00016 39.7 9.9 85 290-376 104-227 (355)
65 2qy1_A Pectate lyase II; GAG l 82.0 4.2 0.00014 39.5 8.5 85 291-375 96-203 (330)
66 3grh_A YBHC, acyl-COA thioeste 81.3 48 0.0017 33.4 19.8 60 188-248 201-279 (422)
67 1air_A Pectate lyase C, PELC; 78.7 6.8 0.00023 38.5 8.8 90 284-375 104-214 (353)
68 2o04_A Pectate lyase, PL; hexa 75.8 7.1 0.00024 39.0 8.1 49 307-357 182-251 (399)
69 1pe9_A Pectate lyase A; parall 75.7 8.2 0.00028 38.1 8.4 83 291-374 115-236 (361)
70 1gq8_A Pectinesterase; hydrola 72.5 63 0.0022 31.1 13.7 55 260-314 113-167 (319)
71 1vbl_A Pectate lyase 47; PL 47 68.3 39 0.0013 33.9 11.5 118 227-351 148-304 (416)
72 1xg2_A Pectinesterase 1; prote 67.0 40 0.0014 32.4 10.9 55 260-314 109-163 (317)
73 3vmv_A Pectate lyase; polysacc 66.5 97 0.0033 29.9 14.6 131 227-375 95-248 (326)
74 2vfm_A Bifunctional tail prote 50.8 34 0.0012 34.1 7.1 78 272-359 320-402 (559)
75 2v5i_A Salmonella typhimurium 49.1 34 0.0012 34.1 6.9 78 272-359 323-405 (559)
76 2x6w_A Tail spike protein; vir 44.0 46 0.0016 35.1 7.4 28 216-243 187-218 (600)
77 2xc1_A Bifunctional tail prote 42.2 51 0.0017 34.1 7.0 78 272-359 427-509 (666)
78 2w7z_A EFSQNR, pentapeptide re 37.9 63 0.0022 28.2 6.4 49 272-326 91-140 (214)
79 3b4n_A Endo-pectate lyase; pec 24.0 5.1E+02 0.018 25.3 11.2 28 215-243 161-188 (344)
80 2w7z_A EFSQNR, pentapeptide re 23.3 1.5E+02 0.0052 25.6 6.3 51 272-328 71-122 (214)
81 3riq_A Tailspike protein; righ 21.2 2.2E+02 0.0074 28.9 7.3 51 272-326 311-364 (543)
82 3n6z_A Putative immunoglobulin 20.5 2.8E+02 0.0096 27.1 8.1 7 321-327 199-205 (363)
No 1
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=100.00 E-value=2.7e-33 Score=298.03 Aligned_cols=227 Identities=22% Similarity=0.213 Sum_probs=176.4
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEc-
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHG- 158 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igd- 158 (379)
.+..+||+||||+|||++|||+|||+||++|. +|+..|.+++.. +++||||+|+|+|++||.++ ++++++++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~---~~Gggc~~st~~-~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~ 118 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAGG---RCGQGCDSTTTQ-PALVYFPPGTYKVSSPLVVL---YQTQLIGDA 118 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTTS---CSCTTCCCCSSS-CEEEEECSSEEEESSCEECC---TTEEEEECS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHhh---hccccccccccc-ceEEEECCceEEEcccEEcc---CCeEEEecC
Confidence 44556999999999999999999999999873 334446666554 78999999999999999999 58888887
Q ss_pred ---cEEEecCCCCCCeEEEEecCC-----CCCCCCCccccceeEEEEecccc---cCCceEEcccceEEeeEEEEeecCC
Q 041981 159 ---GTLRASDDFPTDGYLIDLSAS-----KSSSSYNYEYITLEDLMFDSNYR---GGAISVINSLRTSIDNCYIARFTSN 227 (379)
Q Consensus 159 ---GtI~A~~~f~gd~~lI~g~~~-----~~~~~~~~~~i~lrnl~~D~n~~---~~gi~~~nSq~~~I~N~~i~~~ntd 227 (379)
++||+.++|.+.. +|++... .|+.++++|++++|||+||.+.. ..+|||..+|+++|+||+|.+....
T Consensus 119 ~~~pvIka~~~F~G~~-li~~d~y~~~G~~w~~~~~~F~r~irNlviD~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~s 197 (758)
T 3eqn_A 119 KNLPTLLAAPNFSGIA-LIDADPYLAGGAQYYVNQNNFFRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAA 197 (758)
T ss_dssp SSCCEEEECTTCCSSC-SEESSCBCGGGCBSSCGGGCCCEEEEEEEEECTTCSSCEEEEECCCCSSEEEEEEEEECCCST
T ss_pred CCCCeEecCCCCCCcc-eeeccccCCCCccccccccceeeeecceEEeccccCCCceEEEEEecCceEEEEEEEEecCCC
Confidence 6999999998866 7776433 25677889999999999997655 3578999999999999999995322
Q ss_pred ceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCC-ccEEEEEEEEecceeEEEcccceeeeeeEEecCceee
Q 041981 228 GILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGN-DNAVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGF 306 (379)
Q Consensus 228 GIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn-~~~vsD~~i~~g~~G~~v~gqqn~i~~i~~~n~~Tg~ 306 (379)
| ..| .||.|+.+ .++|+|++|.+|++|+.+++||+++||++|++|.|++
T Consensus 198 g----~~~--------------------------~GI~~e~GSgg~i~Dl~f~GG~~G~~~gnQQfT~rnltF~~~~taI 247 (758)
T 3eqn_A 198 G----NQH--------------------------QGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTAI 247 (758)
T ss_dssp T----CCE--------------------------EEEEECSCCCCEEEEEEEESCSEEEEEECSCCEEEEEEEESCSEEE
T ss_pred C----Ccc--------------------------eeEEecCCCceEEEeeEEeCCceEEEcCCcceEEeccEEeChHHHH
Confidence 2 112 56666654 4499999999999999999999999999999999987
Q ss_pred eeeeeEEeccc--ccceeEecceeccceEEEcC--C--------ccEEEEceeeeec
Q 041981 307 GGTGIYLKLPG--NTQTRIVNSYMDYTGIVAED--P--------VQLHISSSFFLGD 351 (379)
Q Consensus 307 ~G~GI~~~~~g--~~~~~I~nCyldy~~i~~~~--~--------~~i~I~~~~~~g~ 351 (379)
.-.+ -++ +....|.||-. ||.+.. + ..+.|.++.|...
T Consensus 248 ~~~w----~wgwt~~~~~i~nc~v---Gi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~ 297 (758)
T 3eqn_A 248 NAIW----NWGWTFQRITINNCQV---GFDLTQGGTSNTGAQGVGAEAIIDAVVTNT 297 (758)
T ss_dssp EEEE----BSCEEEEEEEEESCSE---EEEECCCCSSTTSCCCBCEEEEEEEEEESC
T ss_pred hhhc----CceEEEEEeEEECCCc---cEEEcCCCCCcccCcceeeEEEEEeeEEcc
Confidence 5332 122 45678888864 444432 1 2577777777654
No 2
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.88 E-value=5.1e-22 Score=203.00 Aligned_cols=274 Identities=19% Similarity=0.218 Sum_probs=160.3
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEcc
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHGG 159 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igdG 159 (379)
+.++|||+||||+|||++|||+|||+||+++++ .++++|+||+|+|++ +||.|++ +..+..+|
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~-------------~ggg~v~vP~G~yl~-~~l~l~s---~v~l~l~g 86 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIEELSK-------------QGGGRLIVPEGVFLT-GPIHLKS---NIELHVKG 86 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHH-------------HTCEEEEECSSEEEE-SCEECCT---TEEEEESS
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHHhhhh-------------cCCeEEEECCCcEEE-eeeEeCC---CcEEEEEE
Confidence 457899999999999999999999999986532 147899999999987 5999984 33334579
Q ss_pred EEEecCCC----C-------CC-----eE----------------EEEecC--CCCCCCCC-------------------
Q 041981 160 TLRASDDF----P-------TD-----GY----------------LIDLSA--SKSSSSYN------------------- 186 (379)
Q Consensus 160 tI~A~~~f----~-------gd-----~~----------------lI~g~~--~~~~~~~~------------------- 186 (379)
+|+++++. + +. .. .|+|.+ ..||...+
T Consensus 87 tL~~s~d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~ 166 (448)
T 3jur_A 87 TIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKK 166 (448)
T ss_dssp EEEECCCGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHH
T ss_pred EEEecCCHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhh
Confidence 99998753 1 10 00 233444 22221000
Q ss_pred ------------------ccccceeEEEEec--ccccCCceEEcccc----------eEEeeEEEEe--ecCCceeEeee
Q 041981 187 ------------------YEYITLEDLMFDS--NYRGGAISVINSLR----------TSIDNCYIAR--FTSNGILVQSG 234 (379)
Q Consensus 187 ------------------~~~i~lrnl~~D~--n~~~~gi~~~nSq~----------~~I~N~~i~~--~ntdGIhi~~s 234 (379)
..+..++-|.|.. +....+++++||+. +.|+|++|.. .||||||+..+
T Consensus 167 l~~~~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s 246 (448)
T 3jur_A 167 LKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESC 246 (448)
T ss_dssp HHHHHHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSC
T ss_pred hhhhhcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCC
Confidence 0011233455542 34456666666554 4455666665 38999999999
Q ss_pred eeEEEecceeeeecccCCCCCccccce---eeEEecC-Ccc-EEEEEEEE--ecceeEEEccc-ceeeeeeEEecCceee
Q 041981 235 HETYIRNSFLGQHITAGGDPGERNFTG---TAINLMG-NDN-AVTDVVIF--SAAVGIMVSGQ-ANTFSGVHCYNKATGF 306 (379)
Q Consensus 235 ~~v~I~ns~Ig~~~~~ggd~~~~~~~g---tGI~i~g-n~~-~vsD~~i~--~g~~G~~v~gq-qn~i~~i~~~n~~Tg~ 306 (379)
++|.|+||.|.+ ||....--++ -|+.+.. +.+ .|.+|.++ .+..|+.++.. ...++||++.||.-.-
T Consensus 247 ~nV~I~n~~i~~-----gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~ 321 (448)
T 3jur_A 247 KYMLIEKCRFDT-----GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMN 321 (448)
T ss_dssp EEEEEESCEEEE-----SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEES
T ss_pred cCEEEEeeEEEe-----CCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEec
Confidence 999999999886 3433221111 1111111 223 66777773 34458888764 4567888888886643
Q ss_pred eeeeeEEecc----c-ccceeEecceec---cceEEEcC----------C--ccEEEEceeeeec-ceeEeeeccc-eee
Q 041981 307 GGTGIYLKLP----G-NTQTRIVNSYMD---YTGIVAED----------P--VQLHISSSFFLGD-AFIVLKSING-VAK 364 (379)
Q Consensus 307 ~G~GI~~~~~----g-~~~~~I~nCyld---y~~i~~~~----------~--~~i~I~~~~~~g~-~~v~l~~~~~-~~~ 364 (379)
.-+|+.++-. | +++..++|+.|. +-.|+++- + .+|++.+-...+. .-+.|....+ .+.
T Consensus 322 t~~GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~ 401 (448)
T 3jur_A 322 VERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVK 401 (448)
T ss_dssp CSEEEEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEE
T ss_pred ccceEEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEe
Confidence 3367777643 1 445555555442 22223321 1 2555555444331 2233444432 455
Q ss_pred eeEEEeeeccC
Q 041981 365 GVNIVDNLFSG 375 (379)
Q Consensus 365 ~~~i~~n~f~~ 375 (379)
++.+-|-.+++
T Consensus 402 ~I~~~nv~i~~ 412 (448)
T 3jur_A 402 DILISDTIIEG 412 (448)
T ss_dssp EEEEEEEEEES
T ss_pred eEEEEEEEEEc
Confidence 66666555554
No 3
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.88 E-value=6.2e-21 Score=193.50 Aligned_cols=202 Identities=14% Similarity=0.151 Sum_probs=118.2
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE-Ec
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI-HG 158 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i-gd 158 (379)
..+++||+||||++||++|||+|||+||++ |+ ++.+|+||+|+|++..||.|.++ .++.+ .+
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~a-c~--------------~g~~V~vP~G~Yli~~~l~l~g~--s~v~l~l~ 79 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWAA-CK--------------SGGLVYIPSGNYALNTWVTLTGG--SATAIQLD 79 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHHH-HT--------------BTCEEEECSSEEEECSCEEEESC--EEEEEEEC
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHHH-CC--------------CCCEEEECCCeEEeCCceeecCC--CeEEEEEc
Confidence 456899999999999999999999999994 43 25789999999999867999974 33433 57
Q ss_pred cEEEecCCCCCCe-----------------EEEEecCCCCCCCCCcc----------ccceeEEEEecccccCCceEEcc
Q 041981 159 GTLRASDDFPTDG-----------------YLIDLSASKSSSSYNYE----------YITLEDLMFDSNYRGGAISVINS 211 (379)
Q Consensus 159 GtI~A~~~f~gd~-----------------~lI~g~~~~~~~~~~~~----------~i~lrnl~~D~n~~~~gi~~~nS 211 (379)
|++.++.+..+.. -.|++.+..||...... .+.++++++.. ...-++++..|
T Consensus 80 G~~l~~~~~~~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~n-sp~~~i~i~~~ 158 (422)
T 1rmg_A 80 GIIYRTGTASGNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVD-APAFHFTMDTC 158 (422)
T ss_dssp SEEEECCCCSSEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEEC-CSSCSEEEEEE
T ss_pred CcEEcccCCCCceEEEEecCceeEEeeccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEEC-CCceEEEEeCc
Confidence 8888864422110 02222221121110000 11222222221 11234555556
Q ss_pred cceEEeeEEEEe---ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecC-Ccc-EEEEEEEEecceeEE
Q 041981 212 LRTSIDNCYIAR---FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMG-NDN-AVTDVVIFSAAVGIM 286 (379)
Q Consensus 212 q~~~I~N~~i~~---~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~g-n~~-~vsD~~i~~g~~G~~ 286 (379)
+.+.|+||+|.. .|+||||+.. +++.|+||.|..- |. +|.+.. ..+ .|.+|.+.++ .|+.
T Consensus 159 ~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~g-----DD--------~Iai~s~~~nI~I~n~~~~~~-~Gis 223 (422)
T 1rmg_A 159 SDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTNK-----DE--------CVTVKSPANNILVESIYCNWS-GGCA 223 (422)
T ss_dssp EEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEESS-----SE--------EEEEEEEEEEEEEEEEEEESS-SEEE
T ss_pred CCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeCC-----CC--------eEEeCCCCcCEEEEeEEEcCC-ccee
Confidence 666677777765 3688888887 8888888887542 22 334333 334 6777776554 3666
Q ss_pred Eccc--ceeeeeeEEecCceeeeeeeeEEe
Q 041981 287 VSGQ--ANTFSGVHCYNKATGFGGTGIYLK 314 (379)
Q Consensus 287 v~gq--qn~i~~i~~~n~~Tg~~G~GI~~~ 314 (379)
++.. ...+++|++.|+.-.-.-+||.++
T Consensus 224 IGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ik 253 (422)
T 1rmg_A 224 MGSLGADTDVTDIVYRNVYTWSSNQMYMIK 253 (422)
T ss_dssp EEEECTTEEEEEEEEEEEEEESSSCSEEEE
T ss_pred ecccCCCCcEEEEEEEeEEEeccceEEEEE
Confidence 6331 123555555555332223455555
No 4
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.88 E-value=5.1e-21 Score=200.76 Aligned_cols=240 Identities=16% Similarity=0.172 Sum_probs=160.0
Q ss_pred CceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEc--
Q 041981 81 PRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHG-- 158 (379)
Q Consensus 81 ~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igd-- 158 (379)
.++|||+||||+|||++|||+|||+||+++ .+||||+|+|++++||.|++ +..+.++
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~G------------------g~V~iP~GtYlis~~l~l~s---nv~L~g~g~ 78 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIESG------------------FPVYVPYGTFMVSRGIKLPS---NTVLTGAGK 78 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHTS------------------SCEEECSEEEEESSCEEECS---SEEEEESCT
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHcC------------------CEEEECCccEEEeCceEECC---CcEEEEeeC
Confidence 356899999999999999999999999963 36999999999978999984 4445554
Q ss_pred --cEEEecCCCCCCeEEEEecCCCCCCCCCccccceeEEEEeccc-------------ccCCceEEc-------------
Q 041981 159 --GTLRASDDFPTDGYLIDLSASKSSSSYNYEYITLEDLMFDSNY-------------RGGAISVIN------------- 210 (379)
Q Consensus 159 --GtI~A~~~f~gd~~lI~g~~~~~~~~~~~~~i~lrnl~~D~n~-------------~~~gi~~~n------------- 210 (379)
++|+++++++...+++..+- .....+.+.|++.+||++. ++..+.+.+
T Consensus 79 ~~t~L~~~~~~p~~~~li~~lI----~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~N 154 (609)
T 3gq8_A 79 RNAVIRFMDSVGRGESLMYNEN----VTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVD 154 (609)
T ss_dssp TTEEEEECTTCCSSCCSEEESC----TTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEES
T ss_pred CCCEEEeCCCCCCCCceeeeee----eecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEe
Confidence 58888876543222211000 0111222333333333210 111222333
Q ss_pred ---------------------------ccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceee
Q 041981 211 ---------------------------SLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTA 263 (379)
Q Consensus 211 ---------------------------Sq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtG 263 (379)
|+.+.|+||+|.....|+|.+..++++.|+||.+-... | ...+.|
T Consensus 155 Sp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~------G--~S~~~G 226 (609)
T 3gq8_A 155 CTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPR------L--TANCNG 226 (609)
T ss_dssp CSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCS------S--CSSCCS
T ss_pred CCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEECCC------C--CCCccc
Confidence 44555666666555566666666666666666652210 0 113578
Q ss_pred EEecCCc-c-EEEEEEEEecceeEEEccc--ceeeeeeEEecCceeeeeeeeEEeccccc-----------ceeEeccee
Q 041981 264 INLMGND-N-AVTDVVIFSAAVGIMVSGQ--ANTFSGVHCYNKATGFGGTGIYLKLPGNT-----------QTRIVNSYM 328 (379)
Q Consensus 264 I~i~gn~-~-~vsD~~i~~g~~G~~v~gq--qn~i~~i~~~n~~Tg~~G~GI~~~~~g~~-----------~~~I~nCyl 328 (379)
|.|.++. + +|.||.|.+...|+++..+ .-.+++|++.+|-.--....+++.++|.+ ...|.||-.
T Consensus 227 IsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~ 306 (609)
T 3gq8_A 227 FEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVS 306 (609)
T ss_dssp EEECTTCEEEEEESEEEESSSEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEE
T ss_pred EEccCCcccEEEEeeEEECCCCEEEEEecCCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceE
Confidence 8887553 4 8999999999999998754 45789999999877767777788887743 366777744
Q ss_pred ---ccc----------eEEEcCCccEEEEceeeeecce
Q 041981 329 ---DYT----------GIVAEDPVQLHISSSFFLGDAF 353 (379)
Q Consensus 329 ---dy~----------~i~~~~~~~i~I~~~~~~g~~~ 353 (379)
-|+ ++++..-.++.|.+.++.||.+
T Consensus 307 ~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~ 344 (609)
T 3gq8_A 307 IRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDP 344 (609)
T ss_dssp ESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCT
T ss_pred EeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCc
Confidence 355 8899999999999999999854
No 5
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.87 E-value=4.3e-21 Score=189.06 Aligned_cols=265 Identities=21% Similarity=0.274 Sum_probs=146.5
Q ss_pred eeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEec-------ceEecCCCcccEE
Q 041981 83 VYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISK-------PLRLPDAGVGNLM 155 (379)
Q Consensus 83 v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~-------pI~f~gpc~gti~ 155 (379)
+|||+||||+|||++|||+|||+||++|++. ++.+||||+|+|+++. ||.++. +..+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-------------gg~~v~~p~G~y~~~~~~~~~~g~l~~~~---~v~l 65 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-------------GGGTVYLPAGEYRVSAAGEPGDGCLMLKD---GVYL 65 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-------------TSEEEEECSEEEEECCCSSGGGCSEECCT---TEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-------------CCCEEEECCeEEEEcccccCCcccEEecC---CeEE
Confidence 6899999999999999999999999999642 4779999999999973 777763 3334
Q ss_pred EEcc----EEEecCCCCCC--eEEEEecCCCCCCCCCccccceeEEEEeccccc--CCc--eE--------EcccceEEe
Q 041981 156 IHGG----TLRASDDFPTD--GYLIDLSASKSSSSYNYEYITLEDLMFDSNYRG--GAI--SV--------INSLRTSID 217 (379)
Q Consensus 156 igdG----tI~A~~~f~gd--~~lI~g~~~~~~~~~~~~~i~lrnl~~D~n~~~--~gi--~~--------~nSq~~~I~ 217 (379)
.++| +|++.+..... ..+...++. ......+++|++|++... +-+ +| ..+..+.|+
T Consensus 66 ~g~g~~~t~l~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~I~G~~~~~~G~idGw~~~~~~~~~~~~~nv~I~ 139 (377)
T 2pyg_A 66 AGAGMGETVIKLIDGSDQKITGMVRSAYGE------ETSNFGMRDLTLDGNRDNTSGKVDGWFNGYIPGGDGADRDVTIE 139 (377)
T ss_dssp EESSBTTEEEEECTTCBSCEEEEEECCTTS------CCEEEEEEEEEEECCGGGCBSCEEEEEECSCTTSSCCEEEEEEE
T ss_pred EEcCCCCcEEEecCCCccCccceEeccCCC------cceEEEEEEEEEECCCccCCccccceecccCccccccccceEEE
Confidence 4442 34554332110 111111111 112345677777764210 000 11 134445566
Q ss_pred eEEEEeecCCceeEeeee-eEEEecceeeeecccCCCCCcccc---------------ceeeEEecC-Ccc-EEEEEEEE
Q 041981 218 NCYIARFTSNGILVQSGH-ETYIRNSFLGQHITAGGDPGERNF---------------TGTAINLMG-NDN-AVTDVVIF 279 (379)
Q Consensus 218 N~~i~~~ntdGIhi~~s~-~v~I~ns~Ig~~~~~ggd~~~~~~---------------~gtGI~i~g-n~~-~vsD~~i~ 279 (379)
++++.+...+|||+..++ .+.|+|+.+... ++.|++.. ...||.+.. +.+ .|.+..+.
T Consensus 140 ~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~----~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~ 215 (377)
T 2pyg_A 140 RVEVREMSGYGFDPHEQTINLTIRDSVAHDN----GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAY 215 (377)
T ss_dssp EEEEECCSSCSEEECSSEEEEEEESCEEESC----SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEE
T ss_pred eEEEEecccceEEeecccCCeEEEeEEeecC----CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEE
Confidence 666665555666654432 344555544211 11221111 124555443 333 67777777
Q ss_pred ecceeEEEc--cc--ceeeeeeEEecCceee-eeeeeEEeccc---ccceeEecceeccceEEEcCCccEEEEceeeeec
Q 041981 280 SAAVGIMVS--GQ--ANTFSGVHCYNKATGF-GGTGIYLKLPG---NTQTRIVNSYMDYTGIVAEDPVQLHISSSFFLGD 351 (379)
Q Consensus 280 ~g~~G~~v~--gq--qn~i~~i~~~n~~Tg~-~G~GI~~~~~g---~~~~~I~nCyldy~~i~~~~~~~i~I~~~~~~g~ 351 (379)
...+|+.+- +. ....+++++.++...- .+.||.+.... +++|+|.+| .+.||++....++.|.+|.|.+.
T Consensus 216 ~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~--~~~GI~i~g~~~~~i~~N~i~~n 293 (377)
T 2pyg_A 216 GNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGN--GSSGVRVYGAQDVQILDNQIHDN 293 (377)
T ss_dssp SCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESC--SSCSEEEEEEEEEEEESCEEESC
T ss_pred CccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECC--CCceEEEecCCCcEEECcEEECC
Confidence 666565541 10 1112334444443221 13456555422 344555555 46799999888999999999876
Q ss_pred c------eeEeeeccce---------eeeeEEEeeeccC
Q 041981 352 A------FIVLKSINGV---------AKGVNIVDNLFSG 375 (379)
Q Consensus 352 ~------~v~l~~~~~~---------~~~~~i~~n~f~~ 375 (379)
. +++++...+. -+...|.+|.|.|
T Consensus 294 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~N~i~g 332 (377)
T 2pyg_A 294 AQAAAVPEVLLQSFDDTAGASGTYYTTLNTRIEGNTISG 332 (377)
T ss_dssp CSSSSCCSEEEECEEETTSSSCEEECCBCCEEESCEEEC
T ss_pred cccccccceEEEEecCCCccceeeeeccCeEEECCEEEC
Confidence 4 3444432211 2567788888877
No 6
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.87 E-value=2.5e-20 Score=198.77 Aligned_cols=243 Identities=14% Similarity=0.142 Sum_probs=160.0
Q ss_pred CceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEc--
Q 041981 81 PRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHG-- 158 (379)
Q Consensus 81 ~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igd-- 158 (379)
.++|||+||||+|||++|||+|||+||+++ .+||||+|+|++++||.|++ +..+.++
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~aG------------------g~V~IPaGtYlisg~I~L~s---nv~L~Geg~ 78 (772)
T 3gqn_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIESG------------------FPVYVPYGTFMVSRGIKLPS---NTVLTGAGK 78 (772)
T ss_dssp SSSEESGGGTCCCEEEEECHHHHHHHHHTT------------------SCEEECSEEEEESSCEEECS---SCEEEEEEE
T ss_pred CcEEEeEecccCCCCChhHHHHHHHHHHcC------------------CEEEECCccEEEEeEEEECC---CcEEEEecC
Confidence 356899999999999999999999999963 36999999999978999995 4444443
Q ss_pred --cEEEecCCCCCCeE-------------------EEEecCCCCCC---------CCC-----ccccceeEEEEeccccc
Q 041981 159 --GTLRASDDFPTDGY-------------------LIDLSASKSSS---------SYN-----YEYITLEDLMFDSNYRG 203 (379)
Q Consensus 159 --GtI~A~~~f~gd~~-------------------lI~g~~~~~~~---------~~~-----~~~i~lrnl~~D~n~~~ 203 (379)
++|+++++++...+ .|++.+...+. +.. ...+.++++++-.. ..
T Consensus 79 ~~t~Lk~~~d~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NS-p~ 157 (772)
T 3gqn_A 79 RNAVIRFMDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDC-TL 157 (772)
T ss_dssp EEEEEEECTTCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESC-SS
T ss_pred CCCEEEeCCCCCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeC-CC
Confidence 57888876543222 22221110000 000 00122333333111 01
Q ss_pred CCceEEc-----------------ccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEe
Q 041981 204 GAISVIN-----------------SLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINL 266 (379)
Q Consensus 204 ~gi~~~n-----------------Sq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i 266 (379)
.++++.+ |+.+.|+||+|.....|+|.+..++++.|+||.+-... | ...+.||.|
T Consensus 158 ~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gph------G--~S~~~GIsI 229 (772)
T 3gqn_A 158 HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPR------L--TANCNGFEI 229 (772)
T ss_dssp CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCS------S--SSSCCSEEE
T ss_pred CCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCC------C--CCCcccEEe
Confidence 1222211 45566666766555567777766677777777662211 0 113578888
Q ss_pred cCCc-c-EEEEEEEEecceeEEEccc--ceeeeeeEEecCceeeeeeeeEEeccccc-----------ceeEeccee---
Q 041981 267 MGND-N-AVTDVVIFSAAVGIMVSGQ--ANTFSGVHCYNKATGFGGTGIYLKLPGNT-----------QTRIVNSYM--- 328 (379)
Q Consensus 267 ~gn~-~-~vsD~~i~~g~~G~~v~gq--qn~i~~i~~~n~~Tg~~G~GI~~~~~g~~-----------~~~I~nCyl--- 328 (379)
.++. + +|.||.|.+...|+++..+ ...++||++.++-.--..+-+++.+.|.+ ...|.||-.
T Consensus 230 Gsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 230 DDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp CTTCEEEEEEEEEEESSSEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESC
T ss_pred cCCcccEEEEceEEECCCcEEEEEEeCCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcc
Confidence 7653 4 8999999999999999754 45789999998877766677788887744 356777744
Q ss_pred ccc----------eEEEcCCccEEEEceeeeecce
Q 041981 329 DYT----------GIVAEDPVQLHISSSFFLGDAF 353 (379)
Q Consensus 329 dy~----------~i~~~~~~~i~I~~~~~~g~~~ 353 (379)
-|+ ++++..-.++.|.+..+.|+.+
T Consensus 310 ~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~ 344 (772)
T 3gqn_A 310 NNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDP 344 (772)
T ss_dssp CCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCT
T ss_pred cccCceeeCCCcceEEEEcCCCcEecCceeccCcc
Confidence 355 8888888999999999999854
No 7
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.81 E-value=7.9e-19 Score=185.35 Aligned_cols=273 Identities=16% Similarity=0.148 Sum_probs=155.3
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEE--
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIH-- 157 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~ig-- 157 (379)
..++|||++|||++||++|||+|||+||+ +|+ .+.+|+||+|+|++ +||.|++ +..+..
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~--------------~g~~v~vP~G~y~~-g~i~lks---~v~L~l~~ 213 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCK--------------PGCRVEIPAGTYKS-GALWLKS---DMTLNLQA 213 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCC--------------TTEEEEECSEEEEE-CCEECCS---SEEEEECT
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcC--------------CCCEEEECCCceEe-cceeccC---ceEEEecC
Confidence 56789999999999999999999999997 543 15689999999998 5999984 222223
Q ss_pred ccEEEecCCC---CC------------------------------CeEEEEe------cCCCCCCC--------------
Q 041981 158 GGTLRASDDF---PT------------------------------DGYLIDL------SASKSSSS-------------- 184 (379)
Q Consensus 158 dGtI~A~~~f---~g------------------------------d~~lI~g------~~~~~~~~-------------- 184 (379)
+++|+++.++ +. ....|.| .+..++..
T Consensus 214 gatL~~s~d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~ 293 (608)
T 2uvf_A 214 GAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQY 293 (608)
T ss_dssp TEEEEECSCGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEE
T ss_pred CcEEEecCCHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccc
Confidence 5899998642 20 0112222 22111000
Q ss_pred ----CCc------------------------cc--cceeEEEEec--ccccCCceEEcccc----------eEEeeEEEE
Q 041981 185 ----YNY------------------------EY--ITLEDLMFDS--NYRGGAISVINSLR----------TSIDNCYIA 222 (379)
Q Consensus 185 ----~~~------------------------~~--i~lrnl~~D~--n~~~~gi~~~nSq~----------~~I~N~~i~ 222 (379)
.+. .+ ...+-|.|.. +....+++++|++. +.|+|+.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~ 373 (608)
T 2uvf_A 294 VASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQ 373 (608)
T ss_dssp CCCCTTTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEE
T ss_pred cccccccccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEc
Confidence 000 00 0122344431 33445666666553 444555554
Q ss_pred e---ecCCceeEeeeeeEEEecceeeeecccCCCCCccccce---eeEEecCCcc-EEEEEEEEecceeEEEccc-ceee
Q 041981 223 R---FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTG---TAINLMGNDN-AVTDVVIFSAAVGIMVSGQ-ANTF 294 (379)
Q Consensus 223 ~---~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~g---tGI~i~gn~~-~vsD~~i~~g~~G~~v~gq-qn~i 294 (379)
. .|+||||+..++++.|+||.|.. ||..+...+| .|+......+ .|.++.+..+.-++.++.+ ...+
T Consensus 374 ~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v 448 (608)
T 2uvf_A 374 TYDANNGDGIEFGNSQNVMVFNNFFDT-----GDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWI 448 (608)
T ss_dssp CTTCTTCCSEEEESCEEEEEESCEEEC-----SSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCE
T ss_pred CCCCCCCCeEEecCCceEEEEeeEEec-----CCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCE
Confidence 3 28999999999999999999975 4554432222 1111111123 5666666655433445442 3456
Q ss_pred eeeEEecCceeeeeeeeEEecc----c-ccceeEecceecc---ceEEEc----------------C---CccEEEEcee
Q 041981 295 SGVHCYNKATGFGGTGIYLKLP----G-NTQTRIVNSYMDY---TGIVAE----------------D---PVQLHISSSF 347 (379)
Q Consensus 295 ~~i~~~n~~Tg~~G~GI~~~~~----g-~~~~~I~nCyldy---~~i~~~----------------~---~~~i~I~~~~ 347 (379)
+||++.||.-.-..+||.++-+ | +++..++|+.|.- .+|++. . ..+|+|++-.
T Consensus 449 ~nI~v~n~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~ 528 (608)
T 2uvf_A 449 EDILAENNVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVT 528 (608)
T ss_dssp EEEEEESCEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEE
T ss_pred EEEEEEeEEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEE
Confidence 6666666654333356666532 2 4555555555532 234431 1 2367777777
Q ss_pred eeecc----eeEeeec--cc-eeeeeEEEeeeccCC
Q 041981 348 FLGDA----FIVLKSI--NG-VAKGVNIVDNLFSGK 376 (379)
Q Consensus 348 ~~g~~----~v~l~~~--~~-~~~~~~i~~n~f~~~ 376 (379)
|.+.. .+.++-. .+ .+.++.+-|-.+++.
T Consensus 529 ~~n~~gt~~~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 529 VDNSTGKNPSIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp EEEECSSSCSEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred EEeeeceEEeEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 76542 3444432 22 467777776666554
No 8
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.80 E-value=3.1e-18 Score=175.76 Aligned_cols=213 Identities=15% Similarity=0.182 Sum_probs=126.1
Q ss_pred CCceeE-eeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEE-EE
Q 041981 80 GPRVYG-VISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLM-IH 157 (379)
Q Consensus 80 ~~~v~n-V~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~-ig 157 (379)
+.+.|+ |+||||+|||++|||+|||+||+++++.+ ++++|+||+|+|++ +||.|++ +..+ +.
T Consensus 18 ~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~------------ggg~V~vP~GtYl~-g~I~lks---~v~L~l~ 81 (464)
T 1h80_A 18 QDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKP------------NGGTLLIPNGTYHF-LGIQMKS---NVHIRVE 81 (464)
T ss_dssp CSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTST------------TCEEEEECSSEEEE-CSEECCT---TEEEEEC
T ss_pred CcceeeehhccCcCCCCCchhHHHHHHHHHHHhhcc------------CCcEEEECCCeEEE-eeEeccC---ceEEEEc
Confidence 567888 99999999999999999999997763311 36799999999998 5999984 3222 32
Q ss_pred -ccEEEecCC--CCCCeEEEEecCCCCCCCCCccccceeEE----EEeccc----ccCCceEEcccceEEeeEEEE----
Q 041981 158 -GGTLRASDD--FPTDGYLIDLSASKSSSSYNYEYITLEDL----MFDSNY----RGGAISVINSLRTSIDNCYIA---- 222 (379)
Q Consensus 158 -dGtI~A~~~--f~gd~~lI~g~~~~~~~~~~~~~i~lrnl----~~D~n~----~~~gi~~~nSq~~~I~N~~i~---- 222 (379)
+++|+++.+ +.. ..++... . ......+.+..- ++|++. ++..+.+.++..+.|+|+++.
T Consensus 82 ~GatL~~s~~td~~~-y~~~~~~-~----~~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ 155 (464)
T 1h80_A 82 SDVIIKPTWNGDGKN-HRLFEVG-V----NNIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT 155 (464)
T ss_dssp TTCEEEECCCTTCSC-EEEEEES-S----SSCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC
T ss_pred CCcEEEeccCCCccc-CCceEee-c----ccCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce
Confidence 378888763 221 1122210 0 000011111111 233221 111233334444444444432
Q ss_pred --------eecCCceeEeeeeeEEEecceeeeecccCCCCCccccceee-EEecCCcc-EEEEEEEEecceeEEEccc--
Q 041981 223 --------RFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTA-INLMGNDN-AVTDVVIFSAAVGIMVSGQ-- 290 (379)
Q Consensus 223 --------~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtG-I~i~gn~~-~vsD~~i~~g~~G~~v~gq-- 290 (379)
..|+|||++ .++++.|+|+.|.... . +.| +...+..+ .|.||.|.+ ..|+.+...
T Consensus 156 ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I~~gd-----d------giGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d 222 (464)
T 1h80_A 156 IFASILVDVTERNGRLH-WSRNGIIERIKQNNAL-----F------GYGLIQTYGADNILFRNLHSEG-GIALRMETDNL 222 (464)
T ss_dssp BSCSEEECEEEETTEEE-EEEEEEEEEEEEESCC-----T------TCEEEEESEEEEEEEEEEEEES-SEEEEEECCCH
T ss_pred EeeceeeeeecCCCcee-eccCEEEeceEEecCC-----C------eEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCc
Confidence 237999999 7799999999988752 2 235 45455555 888888887 677766321
Q ss_pred ------ceeeeeeEEecCceeeeeeeeEEeccc--ccceeEecce
Q 041981 291 ------ANTFSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNSY 327 (379)
Q Consensus 291 ------qn~i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nCy 327 (379)
...+++|++.|+.-.-..++|.+.-.. +++..++|..
T Consensus 223 ~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~~isnItfeNI~ 267 (464)
T 1h80_A 223 LMKNYKQGGIRNIFADNIRCSKGLAAVMFGPHFMKNGDVQVTNVS 267 (464)
T ss_dssp HHHHHTCCEEEEEEEEEEEEESSSEEEEEECTTCBCCCEEEEEEE
T ss_pred eeccCCCCcEEEEEEEeEEEECCceeEEEeCCCceEeEEEEEEEE
Confidence 345677777766544334556555211 3455555553
No 9
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.69 E-value=5.7e-15 Score=147.17 Aligned_cols=216 Identities=20% Similarity=0.143 Sum_probs=121.2
Q ss_pred ceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcC--CEEEEecceEecCCCcccEEEEc-
Q 041981 82 RVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEG--GNYLISKPLRLPDAGVGNLMIHG- 158 (379)
Q Consensus 82 ~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~--GtYlVs~pI~f~gpc~gti~igd- 158 (379)
.+++|++|| .+|||+|||+||+ ||.. |+.+++.|+ |+|++ +||.|++ +..+..+
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-------------Gg~v~~~~~~~g~yl~-g~i~l~s---~vtL~l~~ 69 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALN-NCDQ-------------GKAVRLSAGSTSVFLS-GPLSLPS---GVSLLIDK 69 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHT-TCCT-------------TCEEEEECSSSSEEEE-SCEECCT---TCEEEECT
T ss_pred CeEEECCCC-----CCccHHHHHHHHH-Hhcc-------------CCcEEEECCCCceEEE-eEEEECC---CCEEEECC
Confidence 359999986 5899999999999 5431 344444443 89997 5999984 3333334
Q ss_pred -cEEEecCCC---CC--------------CeEEE----------------EecCC--------CCCCCC------Ccccc
Q 041981 159 -GTLRASDDF---PT--------------DGYLI----------------DLSAS--------KSSSSY------NYEYI 190 (379)
Q Consensus 159 -GtI~A~~~f---~g--------------d~~lI----------------~g~~~--------~~~~~~------~~~~i 190 (379)
.+|+++++. +. ...|| ++.+. .||... .....
T Consensus 70 Ga~L~~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~ 149 (376)
T 1bhe_A 70 GVTLRAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQN 149 (376)
T ss_dssp TCEEEECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEEC
T ss_pred CeEEEeCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCC
Confidence 499997532 10 01122 22221 111100 00001
Q ss_pred ceeEEEEec--ccccCCceEEcc----------cceEEeeEEEEee----cCCceeEeeeeeEEEecceeeeecccCCCC
Q 041981 191 TLEDLMFDS--NYRGGAISVINS----------LRTSIDNCYIARF----TSNGILVQSGHETYIRNSFLGQHITAGGDP 254 (379)
Q Consensus 191 ~lrnl~~D~--n~~~~gi~~~nS----------q~~~I~N~~i~~~----ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~ 254 (379)
..+-|.|.. +....+++++|| ..+.|+|++|... ||||||+..+++|.|+||.|.+ ||.
T Consensus 150 rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDD 224 (376)
T 1bhe_A 150 TPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDD 224 (376)
T ss_dssp CCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSC
T ss_pred CCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCC
Confidence 122233331 223445555554 4556667777763 8999999999999999999875 344
Q ss_pred CccccceeeEEecCCcc-EEEEEEEEecceeEEEcccceeeeeeEEecCceeeeeeeeEEeccc-----ccceeEeccee
Q 041981 255 GERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPG-----NTQTRIVNSYM 328 (379)
Q Consensus 255 ~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g-----~~~~~I~nCyl 328 (379)
...--++.+ . ....+ .|.++.+.. ..|+.++.+-..+++|++.||.---.-+|+.++.+. +++..++|..|
T Consensus 225 cIaiks~~~-~-~~s~nI~I~n~~~~~-ghGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~ 301 (376)
T 1bhe_A 225 NVAIKAYKG-R-AETRNISILHNDFGT-GHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVM 301 (376)
T ss_dssp SEEEEECTT-S-CCEEEEEEEEEEECS-SSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEE
T ss_pred eEEEcccCC-C-CCceEEEEEeeEEEc-cccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEE
Confidence 322111000 0 02233 788888865 356666654335677777776544444677777531 34444444444
No 10
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.64 E-value=4.6e-15 Score=155.34 Aligned_cols=167 Identities=14% Similarity=0.103 Sum_probs=100.8
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCC-EEEE-----------ecceEec
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGG-NYLI-----------SKPLRLP 147 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~G-tYlV-----------s~pI~f~ 147 (379)
..++|||+||||++| ||+|||+||+++++ .++.+|+||+| +|++ ++||.|+
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAIdaCs~-------------~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk 110 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAIDYVSS-------------NGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR 110 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHHHHHH-------------TTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHHHhhh-------------cCCCEEEECCCCEEEecccccccccccccceEEc
Confidence 345799999999998 89999999986432 15789999999 9998 2589987
Q ss_pred CCCcccEEEEccEEEecCC---CCC-----------------CeE------EEEecCCCCCCCCCccccceeEEEEeccc
Q 041981 148 DAGVGNLMIHGGTLRASDD---FPT-----------------DGY------LIDLSASKSSSSYNYEYITLEDLMFDSNY 201 (379)
Q Consensus 148 gpc~gti~igdGtI~A~~~---f~g-----------------d~~------lI~g~~~~~~~~~~~~~i~lrnl~~D~n~ 201 (379)
+ +..+..+|+|+++++ |+. ... .|+|.+..||..........+ |.|....
T Consensus 111 S---nVtL~LdGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~-l~f~~c~ 186 (600)
T 2x6w_A 111 S---NVNLNIEGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAF-GRSYNCS 186 (600)
T ss_dssp T---TEEEEECSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEEC-CSEEEEE
T ss_pred C---ceEEeeecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccccCCCCCE-EEEeeeE
Confidence 3 333346789999753 321 001 334444434421111100111 2222211
Q ss_pred ccCCceEEcc-cc--eEE------eeEEEEee----------cCCceeEeeeeeEEEecceeeeecccCCCCCccc-c--
Q 041981 202 RGGAISVINS-LR--TSI------DNCYIARF----------TSNGILVQSGHETYIRNSFLGQHITAGGDPGERN-F-- 259 (379)
Q Consensus 202 ~~~gi~~~nS-q~--~~I------~N~~i~~~----------ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~-~-- 259 (379)
..+++++|| +. +++ +|++|.+. ||||| |.|+||.|.+- |..+.. -
T Consensus 187 -I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG-----DDCIAI~KSG 253 (600)
T 2x6w_A 187 -VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV-----ESCYFSMSSS 253 (600)
T ss_dssp -EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-----ESCEEECCCT
T ss_pred -EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-----CcEEEEecCC
Confidence 667777777 54 444 23334333 59998 89999999873 443333 1
Q ss_pred -----------cee-eEEecCCc-cEEEEEEEEe
Q 041981 260 -----------TGT-AINLMGND-NAVTDVVIFS 280 (379)
Q Consensus 260 -----------~gt-GI~i~gn~-~~vsD~~i~~ 280 (379)
.|+ ||.|.... +.|.|+.|..
T Consensus 254 s~~ni~~e~~~~GHgGISIGSe~~ggV~NV~V~N 287 (600)
T 2x6w_A 254 FARNIACSVQLHQHDTFYRGSTVNGYCRGAYVVM 287 (600)
T ss_dssp THHHHEEEEEECSSSEEEESCEEEEESEEEEEEE
T ss_pred CcCCeEEEEEcCCCCcEEecccccCcEEEEEEEE
Confidence 344 88875422 3667776644
No 11
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.58 E-value=1.3e-14 Score=146.66 Aligned_cols=255 Identities=16% Similarity=0.247 Sum_probs=134.2
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCC----EEEEecceEec------CC
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGG----NYLISKPLRLP------DA 149 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~G----tYlVs~pI~f~------gp 149 (379)
..+.|||+||||+|||++|||+|||+||++||+.. ++++||||+| +|+++++|.++ |+
T Consensus 48 ~s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~------------GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge 115 (514)
T 2vbk_A 48 NKEAISILDFGVIDDGVTDNYQAIQNAIDAVASLP------------SGGELFIPASNQAVGYIVGSTLLIPGGVNIRGV 115 (514)
T ss_dssp HTTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTST------------TCEEEECCCCSSTTCEEESSCEEECTTEEEECC
T ss_pred CCcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcC------------CCeEEEECCCCcceeEEECCeEEecCCeEEEEe
Confidence 35689999999999999999999999999997532 4789999999 99998888765 44
Q ss_pred CcccEEE----EccEEEecCCCCC-------CeEEEEecCCC-----CCCCCCccccceeEEEEecccccCCceEE--cc
Q 041981 150 GVGNLMI----HGGTLRASDDFPT-------DGYLIDLSASK-----SSSSYNYEYITLEDLMFDSNYRGGAISVI--NS 211 (379)
Q Consensus 150 c~gti~i----gdGtI~A~~~f~g-------d~~lI~g~~~~-----~~~~~~~~~i~lrnl~~D~n~~~~gi~~~--nS 211 (379)
|..+++. ..|++.++. |.. +...|+|.+.- ++.....+.++++.+.+| +....+++.. ++
T Consensus 116 ~~AtIl~s~~~I~GtIia~~-y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fd-nV~Vn~Vt~~v~~S 193 (514)
T 2vbk_A 116 GKASQLRAKSGLTGSVLRLS-YDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFD-NVMVNEVETAYLMQ 193 (514)
T ss_dssp STTSEEEECTTCCSEEEEEC-CCSCCSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEE-SCEEEEEEEEEEEE
T ss_pred cCceEeeccccccccEEecc-CCccccccCceEEEEECCCeEeCCCCCccccceeeeccceEEee-eEEEEeEEEeEecc
Confidence 4443322 123443321 111 01123332210 111112223334444444 2222333221 22
Q ss_pred cc--eEEeeEEEEeecCCceeEe-eeeeEEEecceeeeecccCC-------------CCCccccceeeEEecCC------
Q 041981 212 LR--TSIDNCYIARFTSNGILVQ-SGHETYIRNSFLGQHITAGG-------------DPGERNFTGTAINLMGN------ 269 (379)
Q Consensus 212 q~--~~I~N~~i~~~ntdGIhi~-~s~~v~I~ns~Ig~~~~~gg-------------d~~~~~~~gtGI~i~gn------ 269 (379)
.. ++...|+..... .||++. ++++|.|++|.|..--.|=+ -+.| +...-+|.|..-
T Consensus 194 g~WTIhPi~Cqnvt~r-~gL~f~eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se-~~~hgav~igSE~m~~Gv 271 (514)
T 2vbk_A 194 GLWHSKFIACQAGTCR-VGLHFLGQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSE-AVRSEAIILDSETMCIGF 271 (514)
T ss_dssp SEEEEEEESCEEEEEE-EEEEEESCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSS-CBCCEEEEEESSEEEESC
T ss_pred CcEEEeEeccCceecc-cCccccCCCCeEEEeccEEecCcceeeeecCceecccccCCcch-hcccccEEECchhhcccc
Confidence 22 333344333332 477775 78999999999876211110 1111 112334443322
Q ss_pred cc--EEEEEEE---------EecceeEEEccc--ceeeeeeEEe--cCceeeeeeeeEEeccccc-------ceeEecce
Q 041981 270 DN--AVTDVVI---------FSAAVGIMVSGQ--ANTFSGVHCY--NKATGFGGTGIYLKLPGNT-------QTRIVNSY 327 (379)
Q Consensus 270 ~~--~vsD~~i---------~~g~~G~~v~gq--qn~i~~i~~~--n~~Tg~~G~GI~~~~~g~~-------~~~I~nCy 327 (379)
.+ +|.||.| ..|..|+.+.+- .+.++|-.+. .-+|-| =.|||++.+--+ +.+|.-..
T Consensus 272 k~~v~v~~Clf~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (514)
T 2vbk_A 272 KNAVYVHDCLDLHMEQLDLDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQ-FTGIYFRTPTSTQSHKIVSGVHINTAN 350 (514)
T ss_dssp SEEEEESCCEEEEEESEEEEEESSEEEEESCCEEEEEEEEEEEEECTTCCSC-CEEEEECCCSSCCCCEEEEEEEEECCC
T ss_pred cccEEEEeeeccCCccccccccCCcceEEEeccCceeeccceEEecCCCcce-eEEEEEeCCCccccceeeeeeEecccc
Confidence 22 6777776 345677776431 3444443332 222222 367887665422 23332210
Q ss_pred e---c-cceEEEc-CCccEEEEceeeeec
Q 041981 328 M---D-YTGIVAE-DPVQLHISSSFFLGD 351 (379)
Q Consensus 328 l---d-y~~i~~~-~~~~i~I~~~~~~g~ 351 (379)
- + -..|.+| ++..+-+++|...|+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (514)
T 2vbk_A 351 KNTAANNQSIAIEQSAIFVFVSGCTLTGD 379 (514)
T ss_dssp CCTTCCCEEEEECTTCCCEEEESCEECBS
T ss_pred cccccccceeEEeeeeEEEEEecceecCC
Confidence 0 0 0133333 566788888888887
No 12
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.48 E-value=3.8e-12 Score=136.12 Aligned_cols=174 Identities=18% Similarity=0.290 Sum_probs=115.2
Q ss_pred CCceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEc-
Q 041981 80 GPRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHG- 158 (379)
Q Consensus 80 ~~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igd- 158 (379)
...++||+||||+|||+||||+|||+||++|. ++.+||||+|+|+|+++|.+| .++.+++.
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa~---------------~g~~v~~P~G~Y~vt~Ti~ip---~~~~ivG~~ 458 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYA---------------GCKIIFFDAGTYIVTDTIQIP---AGTQIVGEV 458 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHHHHT---------------TTSEEECCSEEEEESSCEEEC---TTCEEECCS
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHHHhc---------------CCCEEEECCCEeEECCeEEcC---CCCEEEecc
Confidence 55689999999999999999999999999662 357999999999999999999 57888876
Q ss_pred -cEEEecCC-CCC---CeEEEEecCCCCCCCCCccccceeEEEEecccccCC-c--eEEc---c--cc-eEEeeEEEE--
Q 041981 159 -GTLRASDD-FPT---DGYLIDLSASKSSSSYNYEYITLEDLMFDSNYRGGA-I--SVIN---S--LR-TSIDNCYIA-- 222 (379)
Q Consensus 159 -GtI~A~~~-f~g---d~~lI~g~~~~~~~~~~~~~i~lrnl~~D~n~~~~g-i--~~~n---S--q~-~~I~N~~i~-- 222 (379)
++|.+... |.. -..+|....+. ....+++.+|.|+......+ + .|-- + +. ..+.||.|+
T Consensus 459 ~~~I~~~G~~F~d~~~P~pvv~VG~~g-----d~G~veisdl~~~t~g~~~gail~ewn~~~~~~~~~~~~mwDvh~RiG 533 (758)
T 3eqn_A 459 WSVIMGTGSKFTDYNNPQPVIQVGAPG-----SSGVVEITDMIFTTRGPAAGAIIVEWNVHDPSGQQAAAGAWDTHLIIG 533 (758)
T ss_dssp SEEEEECSGGGCCTTSCEEEEEESCTT-----CBSCEEEESCEEEECSCCTTEEEEEECCBCCTTCTTCEEEESCBEEES
T ss_pred cceEecCCccccCCCCCeeeEEeCCCC-----CCCeEEEEeEEEEecCCCCCcEEEEEcCCCCCCCCCCeeEEEEEEEec
Confidence 68888543 322 23466654322 12356788888886433222 1 1111 1 22 556666555
Q ss_pred ee-----------cC-----------CceeEeeeeeEEEeccee--eeecccCC-CCCccccceeeEEecCCcc-EEEEE
Q 041981 223 RF-----------TS-----------NGILVQSGHETYIRNSFL--GQHITAGG-DPGERNFTGTAINLMGNDN-AVTDV 276 (379)
Q Consensus 223 ~~-----------nt-----------dGIhi~~s~~v~I~ns~I--g~~~~~gg-d~~~~~~~gtGI~i~gn~~-~vsD~ 276 (379)
+. .+ -.+||..+..++++|.++ ..|-.-+. ...+..+.+.||-+++... .+--+
T Consensus 534 G~~gt~l~~~~C~~~~~~~~~C~aa~~~lhvt~~ss~y~en~W~W~ADH~~d~~~~~qi~~~~~rGllVes~~~vwlyGt 613 (758)
T 3eqn_A 534 GTAQSGLQVGQCPTSGAGGNNCFADFLGLHLTSGSSAYLEGMWVWLADHDLDSGGSQQISLWSNGGIMSESQGPVWLIGT 613 (758)
T ss_dssp SSTTSSCSTTTCCTTCTTGGGGEEEEEEEEECTTCCEEEESCEEEECSBCSSSSTTCBCCCEEEEEEEECCCSCEEEEEE
T ss_pred cccCcccccccCCCCCCCCccchhheeEEEEecCCCeEEEeeEEEeccCCCCCccccceEEecCceEEEeCCCCeEEEEe
Confidence 21 00 147887667789999887 44432111 1123678999999998732 44444
No 13
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.44 E-value=5.5e-12 Score=124.86 Aligned_cols=198 Identities=13% Similarity=0.129 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEccEEEec-CCC-CCC------
Q 041981 99 STEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHGGTLRAS-DDF-PTD------ 170 (379)
Q Consensus 99 dT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igdGtI~A~-~~f-~gd------ 170 (379)
||+|||+|++++.. .++.+|+||+|+|+. | ..++.+..+..+|+++++ ..| .+.
T Consensus 7 ~t~aiq~ai~~c~~-------------~gg~~v~vP~G~~l~---l--~~l~~~~~l~~~g~~~~~~~~w~~g~~i~~~~ 68 (349)
T 1hg8_A 7 EYSGLATAVSSCKN-------------IVLNGFQVPTGKQLD---L--SSLQNDSTVTFKGTTTFATTADNDFNPIVISG 68 (349)
T ss_dssp SGGGHHHHHHHCSE-------------EEECCCEECTTCCEE---E--TTCCTTCEEEECSEEEECCCCCTTCCSEEEEE
T ss_pred CHHHHHHHHHhccc-------------cCCCEEEECCCEEEE---e--eccCCCeEEEEcCceecccccccCCceEEEEC
Confidence 69999999987521 146789999999974 2 123456555667888775 344 220
Q ss_pred -e--------EEEEecCCCCCCCCC-c--cccceeEEEE-e--c-ccccCCceEEcccc----------eEEeeEEEEe-
Q 041981 171 -G--------YLIDLSASKSSSSYN-Y--EYITLEDLMF-D--S-NYRGGAISVINSLR----------TSIDNCYIAR- 223 (379)
Q Consensus 171 -~--------~lI~g~~~~~~~~~~-~--~~i~lrnl~~-D--~-n~~~~gi~~~nSq~----------~~I~N~~i~~- 223 (379)
. -.|++.+..||.... + .+...+-|.| . . +....+++++||+. +.|+|++|..
T Consensus 69 ~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~ 148 (349)
T 1hg8_A 69 SNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNR 148 (349)
T ss_dssp ESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECG
T ss_pred ccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECC
Confidence 0 123333332332111 0 1022334555 3 3 45667777777654 5556777774
Q ss_pred ---------------ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEE
Q 041981 224 ---------------FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMV 287 (379)
Q Consensus 224 ---------------~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v 287 (379)
.||||||+..+++|.|+||.|.. ||.. |.+..+.+ .|.++.+.++ .|+.+
T Consensus 149 ~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDc--------Iaiksg~nI~i~n~~~~~g-hGisi 214 (349)
T 1hg8_A 149 AGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDC--------VAVTSGTNIVVSNMYCSGG-HGLSI 214 (349)
T ss_dssp GGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCS--------EEESSEEEEEEEEEEEESS-CCEEE
T ss_pred CCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCe--------EEeeCCeEEEEEeEEEeCC-cceEE
Confidence 47999999999999999999875 3443 34433344 7777777654 47777
Q ss_pred ccc----ceeeeeeEEecCceeeeeeeeEEeccc-----ccceeEeccee
Q 041981 288 SGQ----ANTFSGVHCYNKATGFGGTGIYLKLPG-----NTQTRIVNSYM 328 (379)
Q Consensus 288 ~gq----qn~i~~i~~~n~~Tg~~G~GI~~~~~g-----~~~~~I~nCyl 328 (379)
+.. ...+++|++.|+.-.-..+|+.++.+. +++..++|..|
T Consensus 215 GS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~ 264 (349)
T 1hg8_A 215 GSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIAL 264 (349)
T ss_dssp EEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEE
T ss_pred ccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEE
Confidence 542 256777888777665556677776532 44444444443
No 14
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.38 E-value=2.2e-11 Score=119.99 Aligned_cols=198 Identities=15% Similarity=0.131 Sum_probs=114.1
Q ss_pred chHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecce-EecCCCcccEEEEccEEEec-CCCCCC-----
Q 041981 98 DSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPL-RLPDAGVGNLMIHGGTLRAS-DDFPTD----- 170 (379)
Q Consensus 98 DdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI-~f~gpc~gti~igdGtI~A~-~~f~gd----- 170 (379)
.||+|||+|++++.. .++.+|+||+|+|+. | .+. .+..+..+|+++++ ..|.+.
T Consensus 6 ~dt~aiq~ai~~c~~-------------~~g~~v~vP~G~~~~---l~~l~---~~~~l~~~g~~~~~~~~w~g~~i~~~ 66 (339)
T 2iq7_A 6 TDAAAAIKGKASCTS-------------IILNGIVVPAGTTLD---MTGLK---SGTTVTFQGKTTFGYKEWEGPLISFS 66 (339)
T ss_dssp SCHHHHHHHGGGCSE-------------EEEESCEECTTCCEE---ECSCC---TTCEEEEESEEEECCCCSCCCSEEEE
T ss_pred CCHHHHHHHHHHhhc-------------cCCCeEEECCCEEEE---eeccC---CCeEEEEeCcEEcccccccCcEEEEE
Confidence 479999999987521 146789999999874 3 222 35555567777765 333321
Q ss_pred --eE--------EEEecCCCCCCCCCc--cccceeEEEEe--cccccCCceEEc----------ccceEEeeEEEEe---
Q 041981 171 --GY--------LIDLSASKSSSSYNY--EYITLEDLMFD--SNYRGGAISVIN----------SLRTSIDNCYIAR--- 223 (379)
Q Consensus 171 --~~--------lI~g~~~~~~~~~~~--~~i~lrnl~~D--~n~~~~gi~~~n----------Sq~~~I~N~~i~~--- 223 (379)
.. .|++.+..||..... .....+-|.|. .+....+++++| ++.+.|+|++|..
T Consensus 67 ~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~ 146 (339)
T 2iq7_A 67 GTNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAG 146 (339)
T ss_dssp EESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGG
T ss_pred cccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcc
Confidence 01 333333323321100 01111222232 122334444444 5556677777775
Q ss_pred -----ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEcc----ccee
Q 041981 224 -----FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSG----QANT 293 (379)
Q Consensus 224 -----~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~g----qqn~ 293 (379)
.||||||+..+++|.|+||.|.. ||.. |.+..+.+ .|.++.+..+ .|+.++. ....
T Consensus 147 d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDc--------iaiksg~nI~i~n~~~~~g-hGisiGSlg~~~~~~ 212 (339)
T 2iq7_A 147 DSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDC--------LAINSGTNITFTGGTCSGG-HGLSIGSVGGRSDNT 212 (339)
T ss_dssp GGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCS--------EEESSEEEEEEESCEEESS-CCEEEEEESSSSCCE
T ss_pred ccccCCCCCcEEEcCcceEEEEecEEec-----CCCE--------EEEcCCccEEEEeEEEECC-ceEEECcCCcccCCC
Confidence 37999999999999999999875 3443 33333344 6777777765 4777754 1246
Q ss_pred eeeeEEecCceeeeeeeeEEeccc-----ccceeEeccee
Q 041981 294 FSGVHCYNKATGFGGTGIYLKLPG-----NTQTRIVNSYM 328 (379)
Q Consensus 294 i~~i~~~n~~Tg~~G~GI~~~~~g-----~~~~~I~nCyl 328 (379)
+++|++.|+.-.-..+|+.++.+. +++..++|+.|
T Consensus 213 v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~ 252 (339)
T 2iq7_A 213 VKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITL 252 (339)
T ss_dssp EEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEE
T ss_pred EEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEc
Confidence 777777777654445677776532 44555555544
No 15
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.37 E-value=1.9e-11 Score=120.30 Aligned_cols=184 Identities=18% Similarity=0.258 Sum_probs=105.2
Q ss_pred chHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecce-EecCCCcccEEEEccEEEec-CCCCC------
Q 041981 98 DSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPL-RLPDAGVGNLMIHGGTLRAS-DDFPT------ 169 (379)
Q Consensus 98 DdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI-~f~gpc~gti~igdGtI~A~-~~f~g------ 169 (379)
.||+|||+|++++.. .++.+|+||+|+|+. | .+. .+..+..+|+++++ ..|.+
T Consensus 6 ~~t~aiq~ai~~c~~-------------~gg~~v~vP~G~~~~---l~~l~---~~~~l~~~g~~~~~~~~w~g~li~~~ 66 (336)
T 1nhc_A 6 TSASEASESISSCSD-------------VVLSSIEVPAGETLD---LSDAA---DGSTITFEGTTSFGYKEWKGPLIRFG 66 (336)
T ss_dssp SSHHHHHHHGGGCSE-------------EEEESCEECTTCCEE---CTTCC---TTCEEEEESEEEECCCCSCCCSEECC
T ss_pred CCHHHHHHHHHHhhc-------------cCCCeEEECCCEEEE---eeccC---CCeEEEEeceEEcccccccCcEEEEe
Confidence 579999999987421 146789999999873 3 222 35555567887764 22322
Q ss_pred -CeE--------EEEecCCCCCCCCC----c-c--cc---ceeEEEEec----ccccCCceEEcccceEEeeEEEEe---
Q 041981 170 -DGY--------LIDLSASKSSSSYN----Y-E--YI---TLEDLMFDS----NYRGGAISVINSLRTSIDNCYIAR--- 223 (379)
Q Consensus 170 -d~~--------lI~g~~~~~~~~~~----~-~--~i---~lrnl~~D~----n~~~~gi~~~nSq~~~I~N~~i~~--- 223 (379)
... .|++.+..||.... . . .+ ..+|+++.. +...-.+++. ++.+.|+|++|..
T Consensus 67 ~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~ 145 (336)
T 1nhc_A 67 GKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDG 145 (336)
T ss_dssp EESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTH
T ss_pred cCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCc
Confidence 111 34444433332111 0 0 11 112333321 1112245555 6667777888875
Q ss_pred -----ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEccc----cee
Q 041981 224 -----FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSGQ----ANT 293 (379)
Q Consensus 224 -----~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~gq----qn~ 293 (379)
.||||||+..+++|.|+||.|..- |. +|.+..+.+ .|.++.+..+ .|+.++.. ...
T Consensus 146 d~~~~~ntDGidi~~s~nV~I~n~~i~~g-----DD--------ciaiksg~nI~i~n~~~~~g-hGisiGS~g~~~~~~ 211 (336)
T 1nhc_A 146 DDNGGHNTDGFDISESTGVYISGATVKNQ-----DD--------CIAINSGESISFTGGTCSGG-HGLSIGSVGGRDDNT 211 (336)
T ss_dssp HHHTCCSCCSEEECSCEEEEEESCEEESS-----SE--------EEEESSEEEEEEESCEEESS-SEEEEEEESSSSCCE
T ss_pred ccccCCCCCcEEecCCCeEEEEeCEEEcC-----CC--------EEEEeCCeEEEEEeEEEECC-cCceEccCccccCCC
Confidence 379999999999999999999763 33 333333334 6666666654 46666441 245
Q ss_pred eeeeEEecCceeeeeeeeEEec
Q 041981 294 FSGVHCYNKATGFGGTGIYLKL 315 (379)
Q Consensus 294 i~~i~~~n~~Tg~~G~GI~~~~ 315 (379)
+++|++.|+.-.-..+|+.++.
T Consensus 212 v~nV~v~n~~~~~t~~girIkt 233 (336)
T 1nhc_A 212 VKNVTISDSTVSNSANGVRIKT 233 (336)
T ss_dssp EEEEEEEEEEEESCSEEEEEEE
T ss_pred EEEEEEEeeEEECCCcEEEEEE
Confidence 6777777665443445666654
No 16
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.32 E-value=1e-10 Score=115.34 Aligned_cols=198 Identities=11% Similarity=0.080 Sum_probs=113.7
Q ss_pred chHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecce-EecCCCcccEEEEccEEEec-CCCCCCe----
Q 041981 98 DSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPL-RLPDAGVGNLMIHGGTLRAS-DDFPTDG---- 171 (379)
Q Consensus 98 DdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI-~f~gpc~gti~igdGtI~A~-~~f~gd~---- 171 (379)
+-++|||+|++++.. .++.+|+||+|+|+. | .+. .+..+..+|+++++ ..|.+.-
T Consensus 10 ~g~~aiq~ai~~c~~-------------~gg~~v~vP~G~~l~---l~~l~---~~~~l~~~g~~~~~~~~w~g~li~~~ 70 (339)
T 1ia5_A 10 NGASSASKSKTSCST-------------IVLSNVAVPSGTTLD---LTKLN---DGTHVIFSGETTFGYKEWSGPLISVS 70 (339)
T ss_dssp GHHHHHHHHGGGCSE-------------EEEESCEECTTCCEE---ECSCC---TTCEEEEESEEEECCCCSCCCSEEEE
T ss_pred cchHHHHHHHHHhhc-------------cCCCeEEECCCEEEE---eeccC---CCeEEEEeCcEEcccccccCcEEEEE
Confidence 347899999877521 146789999999973 3 222 34555567888775 3343210
Q ss_pred ---E--------EEEecCCCCCCCCCc--cccceeEEEEe--cccccCCceE----------EcccceEEeeEEEEe---
Q 041981 172 ---Y--------LIDLSASKSSSSYNY--EYITLEDLMFD--SNYRGGAISV----------INSLRTSIDNCYIAR--- 223 (379)
Q Consensus 172 ---~--------lI~g~~~~~~~~~~~--~~i~lrnl~~D--~n~~~~gi~~----------~nSq~~~I~N~~i~~--- 223 (379)
. .|++.+..||..... .....+-|.|. .+....++++ ..++.+.|+||+|..
T Consensus 71 ~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~ 150 (339)
T 1ia5_A 71 GSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDG 150 (339)
T ss_dssp EESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGG
T ss_pred cCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCcc
Confidence 1 333333333321110 11111222222 1223344444 445556677777775
Q ss_pred -----ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEccc----cee
Q 041981 224 -----FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSGQ----ANT 293 (379)
Q Consensus 224 -----~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~gq----qn~ 293 (379)
.||||||+..+++|.|+||.|.. +|.. |.+..+.+ .|.++.+..+ .|+.++.. ...
T Consensus 151 d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDc--------Iaiksg~nI~i~n~~~~~g-hGisiGS~g~~~~~~ 216 (339)
T 1ia5_A 151 DDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDC--------VAVNSGENIYFSGGYCSGG-HGLSIGSVGGRSDNT 216 (339)
T ss_dssp TTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCS--------EEESSEEEEEEESCEEESS-SCEEEEEECSSSCCE
T ss_pred ccccCCCCCcEEecCCceEEEEeeEEEc-----CCCe--------EEEeCCeEEEEEeEEEECC-ceEEECcCCcccCCC
Confidence 37999999999999999999875 3443 33333334 6777777665 47777541 256
Q ss_pred eeeeEEecCceeeeeeeeEEeccc-----ccceeEeccee
Q 041981 294 FSGVHCYNKATGFGGTGIYLKLPG-----NTQTRIVNSYM 328 (379)
Q Consensus 294 i~~i~~~n~~Tg~~G~GI~~~~~g-----~~~~~I~nCyl 328 (379)
+++|++.|+.-.-..+|+.++.+. +++..++|..|
T Consensus 217 v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~ 256 (339)
T 1ia5_A 217 VKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITL 256 (339)
T ss_dssp EEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEE
T ss_pred EEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEE
Confidence 788888877655455677776532 44455555544
No 17
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.28 E-value=1.5e-10 Score=115.30 Aligned_cols=184 Identities=13% Similarity=0.102 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEccEEEec-CCCCCCe-------
Q 041981 100 TEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHGGTLRAS-DDFPTDG------- 171 (379)
Q Consensus 100 T~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igdGtI~A~-~~f~gd~------- 171 (379)
++|||+|++++.. .++.+|+||+|+|+. | ..+|.+..+..+|+++++ ..|.+.-
T Consensus 35 ~~aiq~ai~~c~~-------------~~g~~v~vP~G~~l~---l--~~l~~~~~l~~~g~~~~~~~~w~g~~i~~~~~n 96 (362)
T 1czf_A 35 AAAAKAGKAKCST-------------ITLNNIEVPAGTTLD---L--TGLTSGTKVIFEGTTTFQYEEWAGPLISMSGEH 96 (362)
T ss_dssp HHHHHHHGGGCSE-------------EEEESCEECTTCCEE---E--CSCCTTCEEEEESEEEECCCCSCCCSEEEEEES
T ss_pred HHHHHHHHHHhhc-------------cCCCEEEECCCEEEE---e--eccCCCeEEEEeCcEEeccccCCCcEEEEeCcc
Confidence 7899998877421 135689999999873 3 123455555567888874 3343310
Q ss_pred --------EEEEecCCCCCCCCC-ccccceeEEEEe--cccccC----------CceEEcccceEEeeEEEEe-------
Q 041981 172 --------YLIDLSASKSSSSYN-YEYITLEDLMFD--SNYRGG----------AISVINSLRTSIDNCYIAR------- 223 (379)
Q Consensus 172 --------~lI~g~~~~~~~~~~-~~~i~lrnl~~D--~n~~~~----------gi~~~nSq~~~I~N~~i~~------- 223 (379)
-.|++.+..||.... +.....+-|.|. .+.... .+++. |+.+.|+||+|..
T Consensus 97 v~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~ 175 (362)
T 1czf_A 97 ITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQG 175 (362)
T ss_dssp CEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTT
T ss_pred EEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCcccccc
Confidence 123333332332110 011111112222 122223 45555 6778888888875
Q ss_pred -ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEcc----cceeeeee
Q 041981 224 -FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSG----QANTFSGV 297 (379)
Q Consensus 224 -~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~g----qqn~i~~i 297 (379)
.||||||+..++++.|+||.|.. ||.. |.+..+.+ .|.++.+.++ .|+.++. ....++||
T Consensus 176 ~~NtDGidi~~s~nV~I~n~~i~~-----gDDc--------Iaiksg~nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV 241 (362)
T 1czf_A 176 GHNTDAFDVGNSVGVNIIKPWVHN-----QDDC--------LAVNSGENIWFTGGTCIGG-HGLSIGSVGDRSNNVVKNV 241 (362)
T ss_dssp CCSCCSEEECSCEEEEEESCEEEC-----SSCS--------EEESSEEEEEEESCEEESS-CCEEEEEECSSSCCEEEEE
T ss_pred CCCCCceeecCcceEEEEeeEEec-----CCCE--------EEEeCCeEEEEEEEEEeCC-ceeEEeeccccCCCCEEEE
Confidence 37999999999999999999886 3443 33333344 6777777765 4777754 23678889
Q ss_pred EEecCceeeeeeeeEEecc
Q 041981 298 HCYNKATGFGGTGIYLKLP 316 (379)
Q Consensus 298 ~~~n~~Tg~~G~GI~~~~~ 316 (379)
++.|+.-.-..+|+.++.+
T Consensus 242 ~v~n~~~~~t~~GirIKt~ 260 (362)
T 1czf_A 242 TIEHSTVSNSENAVRIKTI 260 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEE
T ss_pred EEEeeEEECCceEEEEEEe
Confidence 8888876655677877753
No 18
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.23 E-value=2.2e-10 Score=115.25 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=138.3
Q ss_pred CCceeEeeec----CccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEE
Q 041981 80 GPRVYGVISY----GADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLM 155 (379)
Q Consensus 80 ~~~v~nV~dy----GA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~ 155 (379)
+...|||++| +|++|+.+|++++|+++|++..+.... .....+.+|+||||+|.+.+|+.+. +..++
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~------~~A~pGdvI~L~~G~Y~l~g~ivId---kp~Lt 81 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTS------PDARPGAAIIIPPGDYDLHTQVVVD---VSYLT 81 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCC------TTSCCCEEEECCSEEEEECSCEEEC---CTTEE
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhccccc------ccCCCCCEEEECCCeeccCCcEEEe---cCcEE
Confidence 6678999999 999999999999999999997532111 0112378999999999743344444 12122
Q ss_pred E-Ec--cE----EE-------------------ecC-CCCCCeEEEEecCCCCCCCCCccccceeEEEEeccc-------
Q 041981 156 I-HG--GT----LR-------------------ASD-DFPTDGYLIDLSASKSSSSYNYEYITLEDLMFDSNY------- 201 (379)
Q Consensus 156 i-gd--Gt----I~-------------------A~~-~f~gd~~lI~g~~~~~~~~~~~~~i~lrnl~~D~n~------- 201 (379)
+ +. |+ |+ -.. ...+...+|+..+ ...-..+++++|.+++-.
T Consensus 82 L~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g-----~~r~s~V~~~~v~I~G~~~~~~G~s 156 (410)
T 2inu_A 82 IAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAG-----DPRLSGIVFRDFCLDGVGFTPGKNS 156 (410)
T ss_dssp EECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCS-----SSCEECCEEESCEEECCCCSSSTTS
T ss_pred EEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeecc-----CcccCCcEECCEEEECCEeecCCCC
Confidence 2 11 22 22 000 1111122222111 011134566777776531
Q ss_pred ---ccCCceEEc-ccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecC--CccEEEE
Q 041981 202 ---RGGAISVIN-SLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMG--NDNAVTD 275 (379)
Q Consensus 202 ---~~~gi~~~n-Sq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~g--n~~~vsD 275 (379)
...||.+.. +.++.|+||.|... --||.++.+.+..|++++|. ++ |-||.+.| ....|.|
T Consensus 157 ~~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~---e~----------GNgI~L~G~~~~~~I~~ 222 (410)
T 2inu_A 157 YHNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIA---EC----------GNCVELTGAGQATIVSG 222 (410)
T ss_dssp CCCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEE---SS----------SEEEEECSCEESCEEES
T ss_pred cccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEE---ec----------CCceeeccccccceEec
Confidence 123555554 55677888888874 67888888888888888886 33 36777777 3337888
Q ss_pred EEEEeccee--EEEcccceeeeeeEEecCce-eeeeeeeEEeccc---ccceeEecceeccceEEEcC-CccEEEEceee
Q 041981 276 VVIFSAAVG--IMVSGQANTFSGVHCYNKAT-GFGGTGIYLKLPG---NTQTRIVNSYMDYTGIVAED-PVQLHISSSFF 348 (379)
Q Consensus 276 ~~i~~g~~G--~~v~gqqn~i~~i~~~n~~T-g~~G~GI~~~~~g---~~~~~I~nCyldy~~i~~~~-~~~i~I~~~~~ 348 (379)
..+..+.+| +++-+ ..+..+.+... ...=.||++.-.. +++|++.+= -|--.++.+ ..+..|++|.|
T Consensus 223 N~i~~~~dG~gIyl~n----s~~~~I~~N~i~~~~R~gIh~m~s~~~~i~~N~f~~~--~~Gi~~M~s~~~~n~v~~N~f 296 (410)
T 2inu_A 223 NHMGAGPDGVTLLAEN----HEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRLQGF--YPGMLRLLNGCKENLITANHI 296 (410)
T ss_dssp CEEECCTTSEEEEEES----EESCEEESCEECSCSSEEEEEESCBSCEEESCEEEES--SSCSEEEESSCBSCEEESCEE
T ss_pred ceeeecCCCCEEEEEe----CCCCEEECCCcccCcceEEEEEccCCCEEECCEEecc--eeEEEEEEcCCCCCEEECCEE
Confidence 888887777 66643 12223332222 1122444443221 556666654 233333443 24788889999
Q ss_pred eecc
Q 041981 349 LGDA 352 (379)
Q Consensus 349 ~g~~ 352 (379)
.++.
T Consensus 297 ~~~~ 300 (410)
T 2inu_A 297 RRTN 300 (410)
T ss_dssp EEEC
T ss_pred eccC
Confidence 8763
No 19
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.13 E-value=1.3e-09 Score=107.34 Aligned_cols=181 Identities=14% Similarity=0.138 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEEEccEEEecC-CCCCC-------e
Q 041981 100 TEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMIHGGTLRASD-DFPTD-------G 171 (379)
Q Consensus 100 T~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~igdGtI~A~~-~f~gd-------~ 171 (379)
++|+|+ + +||.. .++.+|+||+|+|+. |.+. .+..+..+|+++++. .|.+. .
T Consensus 8 ~~aiq~-i-~aC~~------------~gg~~v~vP~G~~l~---l~l~---~~~~l~~~g~~~~~~~~w~~~~i~~~~~n 67 (335)
T 1k5c_A 8 VDDAKD-I-AGCSA------------VTLNGFTVPAGNTLV---LNPD---KGATVTMAGDITFAKTTLDGPLFTIDGTG 67 (335)
T ss_dssp TTGGGG-C-TTCSE------------EEECCEEECTTCCEE---ECCC---TTCEEEECSCEEECCCCSCSCSEEEEEEE
T ss_pred HHHhHH-H-Hhccc------------CCCCEEEECCCEEEE---EEeC---CCeEEEEeccEecccccccCcEEEEEccC
Confidence 678888 4 55431 246789999999872 4333 355555688888753 23321 1
Q ss_pred E-------EEEecCCCCCCCCC-c-cccceeEEEEe-cccccCCceEEc----------ccc-eEEeeEEEEee------
Q 041981 172 Y-------LIDLSASKSSSSYN-Y-EYITLEDLMFD-SNYRGGAISVIN----------SLR-TSIDNCYIARF------ 224 (379)
Q Consensus 172 ~-------lI~g~~~~~~~~~~-~-~~i~lrnl~~D-~n~~~~gi~~~n----------Sq~-~~I~N~~i~~~------ 224 (379)
. .|++.+..||.... + ....++-|.|. .+....+++++| |+. +.|+||+|...
T Consensus 68 i~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~ 147 (335)
T 1k5c_A 68 INFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGSGTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKN 147 (335)
T ss_dssp EEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEEEEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGG
T ss_pred EEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceEEEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccc
Confidence 1 23333322332110 0 01111111111 112334455544 556 66777777652
Q ss_pred ---cCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEccc--ceeeeeeE
Q 041981 225 ---TSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSGQ--ANTFSGVH 298 (379)
Q Consensus 225 ---ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~gq--qn~i~~i~ 298 (379)
||||||+ .+++|.|+||.|.. ||....- ..+.+ .|.++.+.++ .|+.++.. ...++||+
T Consensus 148 ~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIai--------ksg~nI~i~n~~~~~g-hGisIGS~g~~~~v~nV~ 212 (335)
T 1k5c_A 148 LGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAI--------NDGNNIRFENNQCSGG-HGISIGSIATGKHVSNVV 212 (335)
T ss_dssp CCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEE--------EEEEEEEEESCEEESS-CCEEEEEECTTCEEEEEE
T ss_pred cCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEe--------eCCeeEEEEEEEEECC-ccCeEeeccCCCCEEEEE
Confidence 8999999 99999999999986 3443322 22233 5666666554 46666543 46777777
Q ss_pred EecCceeeeeeeeEEec
Q 041981 299 CYNKATGFGGTGIYLKL 315 (379)
Q Consensus 299 ~~n~~Tg~~G~GI~~~~ 315 (379)
+.||.---.-+|+.++.
T Consensus 213 v~n~~~~~t~~girIKt 229 (335)
T 1k5c_A 213 IKGNTVTRSMYGVRIKA 229 (335)
T ss_dssp EESCEEEEEEEEEEEEE
T ss_pred EEeeEEECCCceEEEEE
Confidence 77776555556666664
No 20
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.05 E-value=3.1e-10 Score=118.66 Aligned_cols=196 Identities=11% Similarity=0.197 Sum_probs=119.2
Q ss_pred eeEeeecCccCCCCCchHHHHHHHHHHhcCCCC--CCC-------cccc----ccccCccEEEEcCCEEEE--ecceEec
Q 041981 83 VYGVISYGADPTGKSDSTEAILKALSDAFNGPR--EGS-------LMEG----ISNLGGAEIHLEGGNYLI--SKPLRLP 147 (379)
Q Consensus 83 v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~--~~~-------~~~g----~t~~ggavV~lP~GtYlV--s~pI~f~ 147 (379)
.||...|||++||.+|++++|. +|+++|.... -.. +..| ....++.+||||+|+|++ +++|.++
T Consensus 142 ~~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~ 220 (549)
T 1x0c_A 142 EFDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS 220 (549)
T ss_dssp EEGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC
T ss_pred EECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec
Confidence 4567789999999999999999 8888876421 000 0000 001367899999999997 4689999
Q ss_pred CCCccc-EEEEcc-EEEecCCCCC--CeE------EEEecCCCCCC-------------CCCccc------cceeEEEEe
Q 041981 148 DAGVGN-LMIHGG-TLRASDDFPT--DGY------LIDLSASKSSS-------------SYNYEY------ITLEDLMFD 198 (379)
Q Consensus 148 gpc~gt-i~igdG-tI~A~~~f~g--d~~------lI~g~~~~~~~-------------~~~~~~------i~lrnl~~D 198 (379)
+ ..+ +.+..| .|+++-.|.. ... .|++.+..|+. ...... ...+|+.+.
T Consensus 221 s--~~~~L~l~~GA~L~gs~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~ 298 (549)
T 1x0c_A 221 S--SVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLN 298 (549)
T ss_dssp T--TCCEEEECTTEEEESCEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEE
T ss_pred C--CCCeEecCCCCEEEEEEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEE
Confidence 5 344 445444 4555433331 122 44554433221 000111 222444444
Q ss_pred cccccCCceEEc-----------c-cc--eEEeeEEEEe---ecCCceeEeeeeeEEEecceeeeecccCCCCCccccce
Q 041981 199 SNYRGGAISVIN-----------S-LR--TSIDNCYIAR---FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTG 261 (379)
Q Consensus 199 ~n~~~~gi~~~n-----------S-q~--~~I~N~~i~~---~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~g 261 (379)
|++++| + +. +.|+|+++.. .|||||++. ++|.|+||.|.+- |.
T Consensus 299 ------Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g-----DD------- 358 (549)
T 1x0c_A 299 ------GVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD-----DD------- 358 (549)
T ss_dssp ------SCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-----SC-------
T ss_pred ------CcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-----CC-------
Confidence 444444 3 45 6677777653 279999998 9999999999884 43
Q ss_pred eeEEecCCcc-EEEEEEEEecc-ee-EEEcccceeeeeeEEecCc
Q 041981 262 TAINLMGNDN-AVTDVVIFSAA-VG-IMVSGQANTFSGVHCYNKA 303 (379)
Q Consensus 262 tGI~i~gn~~-~vsD~~i~~g~-~G-~~v~gqqn~i~~i~~~n~~ 303 (379)
+|.+.. .+ .|.+|.++++. .+ +.++.....++||++.||.
T Consensus 359 -cIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~ 401 (549)
T 1x0c_A 359 -GLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVD 401 (549)
T ss_dssp -CEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEE
T ss_pred -EEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeE
Confidence 233333 55 89999997643 34 5665555566666666664
No 21
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=98.86 E-value=4e-08 Score=103.23 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=54.6
Q ss_pred ceEEcccce--EEeeEEEEe---ecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEE
Q 041981 206 ISVINSLRT--SIDNCYIAR---FTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIF 279 (379)
Q Consensus 206 i~~~nSq~~--~I~N~~i~~---~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~ 279 (379)
+++..|+.+ .|+||++.. .|||||++. ++|.|+||+|.+- |..+ .|.. .+ .|.+|.++
T Consensus 350 i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g-----DDcI--------aIks-~NI~I~nc~i~ 413 (574)
T 1ogo_X 350 MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN-----DDAI--------KIYY-SGASVSRATIW 413 (574)
T ss_dssp EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES-----SCSE--------ECCS-TTCEEEEEEEE
T ss_pred EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC-----CCEE--------EECC-ccEEEEeEEEE
Confidence 344445666 778887663 269999998 8999999999884 4333 3333 55 99999988
Q ss_pred ecc-ee-EEEcccceeeeeeEEecCc
Q 041981 280 SAA-VG-IMVSGQANTFSGVHCYNKA 303 (379)
Q Consensus 280 ~g~-~G-~~v~gqqn~i~~i~~~n~~ 303 (379)
.+. .| +.++.....++||++.||.
T Consensus 414 ~g~g~g~IsIGS~~g~V~NV~v~N~~ 439 (574)
T 1ogo_X 414 KCHNDPIIQMGWTSRDISGVTIDTLN 439 (574)
T ss_dssp ECSSSCSEECCSSCCCEEEEEEEEEE
T ss_pred CCCCCceEEEcCCCCcEEEEEEEeEE
Confidence 753 34 6665444556666665554
No 22
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.30 E-value=6.9e-05 Score=75.42 Aligned_cols=249 Identities=15% Similarity=0.180 Sum_probs=141.5
Q ss_pred CCceeEeeecCcc-CCC-CCc-hHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEE--Ee----cceEecCCC
Q 041981 80 GPRVYGVISYGAD-PTG-KSD-STEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYL--IS----KPLRLPDAG 150 (379)
Q Consensus 80 ~~~v~nV~dyGA~-gDG-~tD-dT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYl--Vs----~pI~f~gpc 150 (379)
..+.|.|.--|-+ .+| ..+ -- -||+|++.|. .+-+|+|.+|+|. ++ .+|.+..++
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~---------------pGdtI~l~~GtY~~~~~e~~~~~i~~~~sG 76 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVN---------------PGELILLKPGTYTIPYTQGKGNTITFNKSG 76 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCC---------------TTCEEEECSEEEECCCBTTBCCCEEECCCC
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCC---------------CCCEEEECCCeEccccccccceeEEecCCC
Confidence 4567777543432 223 111 12 6999999872 1568999999999 43 235544322
Q ss_pred c--ccEEEEccEEEecCCCCCCeEEEEecCCC-CC------CCCCccccceeEEEEecccccCCceEEcccceEEeeEEE
Q 041981 151 V--GNLMIHGGTLRASDDFPTDGYLIDLSASK-SS------SSYNYEYITLEDLMFDSNYRGGAISVINSLRTSIDNCYI 221 (379)
Q Consensus 151 ~--gti~igdGtI~A~~~f~gd~~lI~g~~~~-~~------~~~~~~~i~lrnl~~D~n~~~~gi~~~nSq~~~I~N~~i 221 (379)
. ..+++. +. ++...+|+...+. .+ ......+..+++|.|..... .+|.+.. ....|+||+|
T Consensus 77 t~~~pIti~-----~~---~g~~~vI~~~~~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~-~GI~v~g-s~~~i~n~~i 146 (400)
T 1ru4_A 77 KDGAPIYVA-----AA---NCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFKGVEVTRAGY-QGAYVIG-SHNTFENTAF 146 (400)
T ss_dssp BTTBCEEEE-----EG---GGCCEEEECCCCTTCCCTTCCSEEECSSCEEEESEEEESCSS-CSEEECS-SSCEEESCEE
T ss_pred CCCCCEEEE-----Ee---cCCCCEEeCCccCCccccceeEEEEECCeEEEEeEEEEeCCC-CcEEEeC-CCcEEEeEEE
Confidence 1 123331 11 1112233311000 00 00123467788898854332 2776654 5678999999
Q ss_pred EeecCCceeEeeee-eEEEecceeeeecccCCCCCc--cccceeeEEec-CCccEEEEEEEEe-cceeEEEcc--cceee
Q 041981 222 ARFTSNGILVQSGH-ETYIRNSFLGQHITAGGDPGE--RNFTGTAINLM-GNDNAVTDVVIFS-AAVGIMVSG--QANTF 294 (379)
Q Consensus 222 ~~~ntdGIhi~~s~-~v~I~ns~Ig~~~~~ggd~~~--~~~~gtGI~i~-gn~~~vsD~~i~~-g~~G~~v~g--qqn~i 294 (379)
.+....||++..+. ...|++|.|-.-. |+.. ...+|.++.+. +..+.+.++.++. ..+|+.+-. ...++
T Consensus 147 ~~n~~~GI~l~~~~s~n~I~nn~i~~N~----d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i 222 (400)
T 1ru4_A 147 HHNRNTGLEINNGGSYNTVINSDAYRNY----DPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVI 222 (400)
T ss_dssp ESCSSCSEEECTTCCSCEEESCEEECCC----CTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEE
T ss_pred ECCCceeEEEEcccCCeEEEceEEEccc----CccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEE
Confidence 99766799998643 7888999875542 2221 12233343332 2233888888765 458888743 23467
Q ss_pred eeeEEecCceee--------eeeeeEEeccc-ccceeEecceeccc----eEEEcCC-ccEEEEceeeeec-ceeEeeec
Q 041981 295 SGVHCYNKATGF--------GGTGIYLKLPG-NTQTRIVNSYMDYT----GIVAEDP-VQLHISSSFFLGD-AFIVLKSI 359 (379)
Q Consensus 295 ~~i~~~n~~Tg~--------~G~GI~~~~~g-~~~~~I~nCyldy~----~i~~~~~-~~i~I~~~~~~g~-~~v~l~~~ 359 (379)
++..+++.+... .|+||.+-.-+ .....|.||- .|. |+..+.. ..+.|.+|.+.++ .++.|...
T Consensus 223 ~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~~~~~~~v~nn~-a~~N~~~G~~~n~~~~~~~i~nNt~~~N~~~~~~~~~ 301 (400)
T 1ru4_A 223 ENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRSV-AFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSN 301 (400)
T ss_dssp ESCEEESTTCCCSCCTTCCCCCCSEECCCTTCCCCCEEESCE-EESCSSEEEECTTCSSCCEEESCEEESSSEEEEECSC
T ss_pred EeEEEECCccccccccccccCCCCEEEeccCCcCCEEEEeeE-EECCcCcCEeecCCCCCEEEECeEEECCccceEEecC
Confidence 777776664321 25566552111 3467888995 444 8888654 4689999988877 46666544
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.28 E-value=1.7e-05 Score=78.68 Aligned_cols=101 Identities=15% Similarity=0.230 Sum_probs=69.0
Q ss_pred cccceeEEEEecc-------cccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccc
Q 041981 188 EYITLEDLMFDSN-------YRGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFT 260 (379)
Q Consensus 188 ~~i~lrnl~~D~n-------~~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~ 260 (379)
..+.++++.++.. ....|+++..|+.+.|+||+|.. ..|+|.+..++++.|+||.++.
T Consensus 157 ~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~nI~i~n~~~~~-------------- 221 (362)
T 1czf_A 157 NDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-QDDCLAVNSGENIWFTGGTCIG-------------- 221 (362)
T ss_dssp SSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-SSCSEEESSEEEEEEESCEEES--------------
T ss_pred CCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-CCCEEEEeCCeEEEEEEEEEeC--------------
Confidence 3566778878763 12457888889999999999985 4799999999999999997664
Q ss_pred eeeEEecC----Ccc-----EEEEEEEEecceeEEEccc---ceeeeeeEEecCc
Q 041981 261 GTAINLMG----NDN-----AVTDVVIFSAAVGIMVSGQ---ANTFSGVHCYNKA 303 (379)
Q Consensus 261 gtGI~i~g----n~~-----~vsD~~i~~g~~G~~v~gq---qn~i~~i~~~n~~ 303 (379)
++||.+.. ..+ +|.|+.|.+...|+++... .-.+++|+|.|-.
T Consensus 222 ghGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~ 276 (362)
T 1czf_A 222 GHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIV 276 (362)
T ss_dssp SCCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEE
T ss_pred CceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEE
Confidence 25666632 123 4555555666677776431 2346666665543
No 24
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.21 E-value=0.00015 Score=75.16 Aligned_cols=176 Identities=14% Similarity=0.177 Sum_probs=97.7
Q ss_pred ccceeEEEEecccccCCceEE--------cccceEEeeEEEEeecCC--------ceeEee-------eeeEEEecceee
Q 041981 189 YITLEDLMFDSNYRGGAISVI--------NSLRTSIDNCYIARFTSN--------GILVQS-------GHETYIRNSFLG 245 (379)
Q Consensus 189 ~i~lrnl~~D~n~~~~gi~~~--------nSq~~~I~N~~i~~~ntd--------GIhi~~-------s~~v~I~ns~Ig 245 (379)
...+++..|+....+..+.+. .+....|++|+|.+-... ||++.. +....|+++.++
T Consensus 127 ~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~ 206 (506)
T 1dbg_A 127 YNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFS 206 (506)
T ss_dssp SCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEE
T ss_pred CeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEc
Confidence 345566666544332113332 344556777777763211 555443 246677777776
Q ss_pred eecccCCCCCccccceeeEEec-----CCccEEEEEEEEeccee--EEE-cccceeeeeeEEecCceeeeeeeeEEeccc
Q 041981 246 QHITAGGDPGERNFTGTAINLM-----GNDNAVTDVVIFSAAVG--IMV-SGQANTFSGVHCYNKATGFGGTGIYLKLPG 317 (379)
Q Consensus 246 ~~~~~ggd~~~~~~~gtGI~i~-----gn~~~vsD~~i~~g~~G--~~v-~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g 317 (379)
... .+ .-.+.+|.+. .++..|.+-.|....-| ++. ....+++++=+|.++.- +|.+....
T Consensus 207 ~~~-~~------~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~~g-----gi~l~~~~ 274 (506)
T 1dbg_A 207 NPQ-KP------GNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQG-----TMNFRHGD 274 (506)
T ss_dssp ECC-CS------SSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESCSS-----EEEEEECS
T ss_pred ccc-cC------CCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcccC-----cEEEeecC
Confidence 642 11 1122334433 12336667677654322 332 33346777777777632 46665543
Q ss_pred ---ccceeEecceecc--ceEEEcCCccEEEEceeeeecc--------eeEeee-c----cceeeeeEEEeeeccCCC
Q 041981 318 ---NTQTRIVNSYMDY--TGIVAEDPVQLHISSSFFLGDA--------FIVLKS-I----NGVAKGVNIVDNLFSGKN 377 (379)
Q Consensus 318 ---~~~~~I~nCyldy--~~i~~~~~~~i~I~~~~~~g~~--------~v~l~~-~----~~~~~~~~i~~n~f~~~~ 377 (379)
+.+|.+.++-.+. -||++.+..+ .|.+|.|.+.. =|.|.+ . ...+.+..|.+|-|-++.
T Consensus 275 ~s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~ 351 (506)
T 1dbg_A 275 HQVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVN 351 (506)
T ss_dssp SCEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCS
T ss_pred ccEEECCEEECCcCccCceEEEEECCCC-EEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCc
Confidence 5678777774333 5888876655 99999999874 233331 1 124578889999887764
No 25
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.15 E-value=4.6e-05 Score=74.79 Aligned_cols=99 Identities=16% Similarity=0.264 Sum_probs=65.3
Q ss_pred ccceeEEEEeccc-------ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccce
Q 041981 189 YITLEDLMFDSNY-------RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTG 261 (379)
Q Consensus 189 ~i~lrnl~~D~n~-------~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~g 261 (379)
.+.++++.++... ...|+++..|+.+.|+||+|.. ..|+|.+..++++.|+||.+.. +
T Consensus 133 nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-gDDciaiksg~nI~i~n~~~~~--------------g 197 (339)
T 2iq7_A 133 TLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-QDDCLAINSGTNITFTGGTCSG--------------G 197 (339)
T ss_dssp EEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-SSCSEEESSEEEEEEESCEEES--------------S
T ss_pred CEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-CCCEEEEcCCccEEEEeEEEEC--------------C
Confidence 4556677776531 2347888889999999999864 4789999989999999997654 2
Q ss_pred eeEEecC---C-cc-----EEEEEEEEecceeEEEccc---ceeeeeeEEecC
Q 041981 262 TAINLMG---N-DN-----AVTDVVIFSAAVGIMVSGQ---ANTFSGVHCYNK 302 (379)
Q Consensus 262 tGI~i~g---n-~~-----~vsD~~i~~g~~G~~v~gq---qn~i~~i~~~n~ 302 (379)
+||.|.. . .+ +|.|++|.+...|+.+... .-.+++|+|.|.
T Consensus 198 hGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni 250 (339)
T 2iq7_A 198 HGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGI 250 (339)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEE
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeE
Confidence 4566522 1 12 5556666666777777532 134555555544
No 26
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=98.11 E-value=0.00024 Score=74.66 Aligned_cols=226 Identities=10% Similarity=0.077 Sum_probs=134.1
Q ss_pred CccEEEEcCCEEEEecceEecCCCc---ccEEEE---------cc-EEEecCCCCC-CeE------EEEecCCCCCCCCC
Q 041981 127 GGAEIHLEGGNYLISKPLRLPDAGV---GNLMIH---------GG-TLRASDDFPT-DGY------LIDLSASKSSSSYN 186 (379)
Q Consensus 127 ggavV~lP~GtYlVs~pI~f~gpc~---gti~ig---------dG-tI~A~~~f~g-d~~------lI~g~~~~~~~~~~ 186 (379)
++++||||+|+|++. ++.|.+||+ |++.+. .| +|+++-.|.+ ... .|++.+..|+...+
T Consensus 230 ggg~v~vP~G~yl~~-~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~~ww~~~~ 308 (574)
T 1ogo_X 230 AKSILYFPPGVYWMN-QDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYVYQANAG 308 (574)
T ss_dssp SSSEEEECSEEEEEC-BCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTSCTTCBTT
T ss_pred CCCEEEECCcEEEEe-ccccCCcccccceEEEecCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCcccccccc
Confidence 678999999999984 888888874 222221 12 1222111111 111 33444333321111
Q ss_pred ccccceeEEEEecccccCCceEE------cccceEEeeEEEEeecCCceeEeeeeeE--EEecceeeeecccCCCCCccc
Q 041981 187 YEYITLEDLMFDSNYRGGAISVI------NSLRTSIDNCYIARFTSNGILVQSGHET--YIRNSFLGQHITAGGDPGERN 258 (379)
Q Consensus 187 ~~~i~lrnl~~D~n~~~~gi~~~------nSq~~~I~N~~i~~~ntdGIhi~~s~~v--~I~ns~Ig~~~~~ggd~~~~~ 258 (379)
..+... ..++.++.+. +|+.+.|+++++.+..-..||+..++++ .|++..+-... .
T Consensus 309 ~~~~~~-------~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~---------~ 372 (574)
T 1ogo_X 309 DNYIAV-------KSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF---------F 372 (574)
T ss_dssp TTTBSC-------CCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC---------S
T ss_pred cccccc-------cCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC---------C
Confidence 111111 0134455555 7888888888888876777888888888 88888643211 1
Q ss_pred cceeeEEecCCcc-EEEEEEEEecceeEEEcccceeeeeeEEecCceeeeeee-eEE--ecccccceeEecceec-----
Q 041981 259 FTGTAINLMGNDN-AVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGFGGTG-IYL--KLPGNTQTRIVNSYMD----- 329 (379)
Q Consensus 259 ~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~gqqn~i~~i~~~n~~Tg~~G~G-I~~--~~~g~~~~~I~nCyld----- 329 (379)
.+.-||++. .+ .|.||.|..+.+.+-+..++-+|+|++++.+. |-| |.+ ...++.+..|+||.|.
T Consensus 373 ~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~----g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~ 446 (574)
T 1ogo_X 373 FQTDGPEIY--PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCH----NDPIIQMGWTSRDISGVTIDTLNVIHTRYI 446 (574)
T ss_dssp TTCCCCBCC--TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECS----SSCSEECCSSCCCEEEEEEEEEEEEECCCS
T ss_pred CCCccCccc--CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCC----CCceEEEcCCCCcEEEEEEEeEEEECCccc
Confidence 125678877 55 99999999999999998867777777765431 111 222 1234788889999873
Q ss_pred -----cceEE--------------EcCCccEEEEceeeeecceeEeeec-cceeeeeEEEeeeccC
Q 041981 330 -----YTGIV--------------AEDPVQLHISSSFFLGDAFIVLKSI-NGVAKGVNIVDNLFSG 375 (379)
Q Consensus 330 -----y~~i~--------------~~~~~~i~I~~~~~~g~~~v~l~~~-~~~~~~~~i~~n~f~~ 375 (379)
|.+.. ...+.+|++.+-.+.+..+-+++-. .+.++++.|-|-.+.|
T Consensus 447 ~~~~~~~g~iiGs~~~y~~~~~~~~g~gVNI~f~NI~~~~v~~~ii~i~p~~~I~nI~~~NI~i~g 512 (574)
T 1ogo_X 447 KSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPD 512 (574)
T ss_dssp SCCTTTTCEEEEECCCSSSSCCCEEEEEEEEEEEEEEECSSBCEEEEECCSEEEEEEEEEEEEETT
T ss_pred ceeccccceeeccccccccccccCCCceEEEEEEeEEEEceeEeeEEECCCCCEEEEEEEeEEEeC
Confidence 22332 0111278887877777655444433 2357777777766655
No 27
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.07 E-value=9.4e-05 Score=72.64 Aligned_cols=99 Identities=20% Similarity=0.375 Sum_probs=64.7
Q ss_pred ccceeEEEEeccc-------ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccce
Q 041981 189 YITLEDLMFDSNY-------RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTG 261 (379)
Q Consensus 189 ~i~lrnl~~D~n~-------~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~g 261 (379)
.+.++++.++... ...|+++..|+.+.|+||+|.. ..|+|.+..++++.|+||..+. +
T Consensus 137 nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-gDDcIaiksg~nI~i~n~~~~~--------------g 201 (339)
T 1ia5_A 137 YLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-QDDCVAVNSGENIYFSGGYCSG--------------G 201 (339)
T ss_dssp EEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-SSCSEEESSEEEEEEESCEEES--------------S
T ss_pred CeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-CCCeEEEeCCeEEEEEeEEEEC--------------C
Confidence 4566677776531 2457888889999999999864 4799999999999999997654 2
Q ss_pred eeEEecC----Ccc-----EEEEEEEEecceeEEEccc---ceeeeeeEEecC
Q 041981 262 TAINLMG----NDN-----AVTDVVIFSAAVGIMVSGQ---ANTFSGVHCYNK 302 (379)
Q Consensus 262 tGI~i~g----n~~-----~vsD~~i~~g~~G~~v~gq---qn~i~~i~~~n~ 302 (379)
+||.+.. ..+ +|.|++|.+...|+.+... .-.+++|+|.|-
T Consensus 202 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni 254 (339)
T 1ia5_A 202 HGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDI 254 (339)
T ss_dssp SCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEE
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEE
Confidence 4566521 112 5555566666777777432 123455555443
No 28
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.00 E-value=0.00013 Score=72.46 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=65.1
Q ss_pred cccceeEEEEeccc---ccCCceEEcccceEEeeEEEEeecCCceeEe------eeeeEEEecceeeeecccCCCCCccc
Q 041981 188 EYITLEDLMFDSNY---RGGAISVINSLRTSIDNCYIARFTSNGILVQ------SGHETYIRNSFLGQHITAGGDPGERN 258 (379)
Q Consensus 188 ~~i~lrnl~~D~n~---~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~------~s~~v~I~ns~Ig~~~~~ggd~~~~~ 258 (379)
..+.++++.++... ...|+++..|+.+.|+||+|.. ..|+|.+. .++++.|+||..+.
T Consensus 183 ~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-gDDcIaiks~~~~~~s~nI~I~n~~~~~------------ 249 (376)
T 1bhe_A 183 DGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-GDDNVAIKAYKGRAETRNISILHNDFGT------------ 249 (376)
T ss_dssp EEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-SSCSEEEEECTTSCCEEEEEEEEEEECS------------
T ss_pred CcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-CCCeEEEcccCCCCCceEEEEEeeEEEc------------
Confidence 35677888887632 3458999999999999999975 47999998 48999999998653
Q ss_pred cceeeEEecC----Ccc-EEEEEEEEecceeEEEcc
Q 041981 259 FTGTAINLMG----NDN-AVTDVVIFSAAVGIMVSG 289 (379)
Q Consensus 259 ~~gtGI~i~g----n~~-~vsD~~i~~g~~G~~v~g 289 (379)
|+||.+.. -.+ +|.|+.|.+...|+.+..
T Consensus 250 --ghGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt 283 (376)
T 1bhe_A 250 --GHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKS 283 (376)
T ss_dssp --SSCEEEEEEESSEEEEEEEEEEEESCSEEEEEEC
T ss_pred --cccEEeccCCccEeeEEEEeeEEeCCCcEEEEEE
Confidence 24555532 223 788888888888888753
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.93 E-value=0.00043 Score=69.98 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=56.9
Q ss_pred ccceeEEEEeccc--ccCCceEEcccceEEeeEEEEeecCCceeEee-eeeEEEecceeeeecccCCCCCccccceeeEE
Q 041981 189 YITLEDLMFDSNY--RGGAISVINSLRTSIDNCYIARFTSNGILVQS-GHETYIRNSFLGQHITAGGDPGERNFTGTAIN 265 (379)
Q Consensus 189 ~i~lrnl~~D~n~--~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~-s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~ 265 (379)
.+.++|+.++... ...|+++.. +.+.|+||+|.. ..|+|.+.. ++++.|+||..+. ++||.
T Consensus 160 nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~-gDD~Iai~s~~~nI~I~n~~~~~--------------~~Gis 223 (422)
T 1rmg_A 160 DGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTN-KDECVTVKSPANNILVESIYCNW--------------SGGCA 223 (422)
T ss_dssp EEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEES-SSEEEEEEEEEEEEEEEEEEEES--------------SSEEE
T ss_pred CEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeC-CCCeEEeCCCCcCEEEEeEEEcC--------------Cccee
Confidence 4556777776521 234677776 778888888764 467888876 7888888887332 24555
Q ss_pred ec--CCcc-----EEEEEEEEecceeEEEccc--ceeeeeeEEecC
Q 041981 266 LM--GNDN-----AVTDVVIFSAAVGIMVSGQ--ANTFSGVHCYNK 302 (379)
Q Consensus 266 i~--gn~~-----~vsD~~i~~g~~G~~v~gq--qn~i~~i~~~n~ 302 (379)
|. +.++ .|.|+.+.....|+.+..+ .-.++||+|.|-
T Consensus 224 IGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g~G~v~nI~~~NI 269 (422)
T 1rmg_A 224 MGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGGSGTVSNVLLENF 269 (422)
T ss_dssp EEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBCCEEEEEEEEEEE
T ss_pred ecccCCCCcEEEEEEEeEEEeccceEEEEEecCCCcEEEEEEEEeE
Confidence 52 2112 4555555555566666421 124445544443
No 30
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.76 E-value=0.00027 Score=68.99 Aligned_cols=164 Identities=11% Similarity=0.104 Sum_probs=89.5
Q ss_pred CceEEcccceEEeeEEEEeecCCceeEee-eeeEEEecceeeeecccCCCCCcccc-ceeeEEecCCcc-EEEEEEEEe-
Q 041981 205 AISVINSLRTSIDNCYIARFTSNGILVQS-GHETYIRNSFLGQHITAGGDPGERNF-TGTAINLMGNDN-AVTDVVIFS- 280 (379)
Q Consensus 205 gi~~~nSq~~~I~N~~i~~~ntdGIhi~~-s~~v~I~ns~Ig~~~~~ggd~~~~~~-~gtGI~i~gn~~-~vsD~~i~~- 280 (379)
|+.+..|....|.++++...++||||+.. ++++.|+++.+...-. +.... .+..-. ....+ .|.+..+++
T Consensus 174 GI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~-----g~~~~~~g~~~~-~~s~nv~i~~N~~~~n 247 (377)
T 2pyg_A 174 GFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGS-----SGLVVQRGLEDL-ALPSNILIDGGAYYDN 247 (377)
T ss_dssp SEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSS-----CSEEEECCSSCC-CCCEEEEEESCEEESC
T ss_pred ceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccC-----ceEEEeccccCC-CCCccEEEECCEEEcC
Confidence 33444444444555555555677777766 7777777777654211 00000 000000 11222 555656665
Q ss_pred cceeEEEc-ccceeeeeeEEecCceeeeeeeeEEeccc---ccceeEeccee--ccceEEEc-------------CCccE
Q 041981 281 AAVGIMVS-GQANTFSGVHCYNKATGFGGTGIYLKLPG---NTQTRIVNSYM--DYTGIVAE-------------DPVQL 341 (379)
Q Consensus 281 g~~G~~v~-gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g---~~~~~I~nCyl--dy~~i~~~-------------~~~~i 341 (379)
...|+.+. .+..++++.++.++. ..||.++... +..|+|.+|.. .|..+..+ .+.++
T Consensus 248 ~~~Gi~~~~~~~v~i~~N~i~~~~----~~GI~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 323 (377)
T 2pyg_A 248 AREGVLLKMTSDITLQNADIHGNG----SSGVRVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYYTTLNT 323 (377)
T ss_dssp SSCSEEEEEEEEEEEESCEEESCS----SCSEEEEEEEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEECCBCC
T ss_pred ccCceEeccccCeEEECCEEECCC----CceEEEecCCCcEEECcEEECCcccccccceEEEEecCCCccceeeeeccCe
Confidence 35676654 244666666666651 3455544322 67788888843 23333322 24688
Q ss_pred EEEceeeee--cceeEeeeccceeeeeEEEeeeccCCCC
Q 041981 342 HISSSFFLG--DAFIVLKSINGVAKGVNIVDNLFSGKNN 378 (379)
Q Consensus 342 ~I~~~~~~g--~~~v~l~~~~~~~~~~~i~~n~f~~~~~ 378 (379)
.|.+|.|.+ .....|........++.|.+|.|.|..+
T Consensus 324 ~i~~N~i~g~~~~~~~i~~~~~~~~~~~i~~n~i~~~~~ 362 (377)
T 2pyg_A 324 RIEGNTISGSANSTYGIQERNDGTDYSSLIDNDIAGVQQ 362 (377)
T ss_dssp EEESCEEECCSSCCEEEEECSSSCBCCEEESCEEESSSE
T ss_pred EEECCEEECcCCCccceEEccCCCccEEEECcEEeCCcc
Confidence 999999999 3333333332345689999999988743
No 31
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.76 E-value=0.0004 Score=68.48 Aligned_cols=139 Identities=12% Similarity=0.149 Sum_probs=100.1
Q ss_pred CceE-E-cccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCC-------ccccceeeEEecCCcc-EEE
Q 041981 205 AISV-I-NSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPG-------ERNFTGTAINLMGNDN-AVT 274 (379)
Q Consensus 205 gi~~-~-nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~-------~~~~~gtGI~i~gn~~-~vs 274 (379)
.+.+ . .++.+.|+++++.+..-.+|++..++++.|++..|-... ++.. ....+.-||++.+..+ .|.
T Consensus 104 ~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~---~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~ 180 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRA---GDKPNAKSGSLPAAHNTDGFDISSSDHVTLD 180 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGG---GSSCCTTTTTSCSCCSCCSEEEESCEEEEEE
T ss_pred EEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCC---CccccccccccccCCCCCeEEEccccEEEEE
Confidence 5566 5 566788999999988778999999999999999887643 1110 0124667899988888 999
Q ss_pred EEEEEecceeEEEcc-cceeeeeeEEecCceeeeeeeeEEe------cccccceeEecceecc--ceEEEcC-------C
Q 041981 275 DVVIFSAAVGIMVSG-QANTFSGVHCYNKATGFGGTGIYLK------LPGNTQTRIVNSYMDY--TGIVAED-------P 338 (379)
Q Consensus 275 D~~i~~g~~G~~v~g-qqn~i~~i~~~n~~Tg~~G~GI~~~------~~g~~~~~I~nCyldy--~~i~~~~-------~ 338 (379)
|+.|..+.+++.+.. +.-++++++|++ |.||.+- ..+++...|+||+|.- +|||+.. -
T Consensus 181 n~~i~~gDDcIaiksg~nI~i~n~~~~~------ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v 254 (349)
T 1hg8_A 181 NNHVYNQDDCVAVTSGTNIVVSNMYCSG------GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTI 254 (349)
T ss_dssp EEEEECSSCSEEESSEEEEEEEEEEEES------SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEE
T ss_pred eeEEecCCCeEEeeCCeEEEEEeEEEeC------CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccc
Confidence 999999999999964 455666666654 3455552 2448889999998853 4788753 2
Q ss_pred ccEEEEceeeeecc
Q 041981 339 VQLHISSSFFLGDA 352 (379)
Q Consensus 339 ~~i~I~~~~~~g~~ 352 (379)
.+|.+.+....+..
T Consensus 255 ~nI~~~ni~~~~v~ 268 (349)
T 1hg8_A 255 NNVTYQNIALTNIS 268 (349)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEccc
Confidence 46666666666654
No 32
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.74 E-value=0.00036 Score=68.33 Aligned_cols=154 Identities=12% Similarity=0.173 Sum_probs=109.3
Q ss_pred cccceeEE---EEeccc--------------ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeeccc
Q 041981 188 EYITLEDL---MFDSNY--------------RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITA 250 (379)
Q Consensus 188 ~~i~lrnl---~~D~n~--------------~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ 250 (379)
..+.+... +||++. ++..+.+.++..+.|+++++.+..-.+|++. ++++.|++..|-....
T Consensus 68 ~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~- 145 (336)
T 1nhc_A 68 KDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDG- 145 (336)
T ss_dssp ESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTH-
T ss_pred CCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCc-
Confidence 45566665 677542 3446788888899999999999878899999 9999999998866421
Q ss_pred CCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEEcc-cceeeeeeEEecCceeeeeeeeEEec------cccccee
Q 041981 251 GGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMVSG-QANTFSGVHCYNKATGFGGTGIYLKL------PGNTQTR 322 (379)
Q Consensus 251 ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v~g-qqn~i~~i~~~n~~Tg~~G~GI~~~~------~g~~~~~ 322 (379)
|. ..+-+.-||++.+..+ .|.|+.|..+.+++.+.. +.-++++++|++ |.||.+-. .+++...
T Consensus 146 --d~-~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~------ghGisiGS~g~~~~~~v~nV~ 216 (336)
T 1nhc_A 146 --DD-NGGHNTDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSG------GHGLSIGSVGGRDDNTVKNVT 216 (336)
T ss_dssp --HH-HTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEES------SSEEEEEEESSSSCCEEEEEE
T ss_pred --cc-ccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEEC------CcCceEccCccccCCCEEEEE
Confidence 10 1133667899998888 999999999999999964 445555555554 34555522 3478899
Q ss_pred Eecceec--cceEEEcC-------CccEEEEceeeeecc
Q 041981 323 IVNSYMD--YTGIVAED-------PVQLHISSSFFLGDA 352 (379)
Q Consensus 323 I~nCyld--y~~i~~~~-------~~~i~I~~~~~~g~~ 352 (379)
++||.+. .+|+|+.. -.+|.+.+....+..
T Consensus 217 v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~ 255 (336)
T 1nhc_A 217 ISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGIT 255 (336)
T ss_dssp EEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEES
T ss_pred EEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccc
Confidence 9999884 34777663 236666666666654
No 33
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.40 E-value=0.012 Score=57.61 Aligned_cols=192 Identities=21% Similarity=0.320 Sum_probs=104.0
Q ss_pred HHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE-Ecc---EEE-ecCCCCCCeEEE
Q 041981 100 TEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI-HGG---TLR-ASDDFPTDGYLI 174 (379)
Q Consensus 100 T~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i-gdG---tI~-A~~~f~gd~~lI 174 (379)
=.-||+|+++|-... ....+|+|++|+|. .+|.++.. +.++++ ++| |+. ...... +.
T Consensus 19 f~TIq~AI~aap~~~-----------~~~~~I~I~~G~Y~--E~V~I~~~-k~~Itl~G~g~~~tiI~~~~~~~-~g--- 80 (319)
T 1gq8_A 19 YKTVSEAVAAAPEDS-----------KTRYVIRIKAGVYR--ENVDVPKK-KKNIMFLGDGRTSTIITASKNVQ-DG--- 80 (319)
T ss_dssp BSSHHHHHHHSCSSC-----------SSCEEEEECSEEEE--CCEEECTT-CCSEEEEESCTTTEEEEECCCTT-TT---
T ss_pred ccCHHHHHHhccccC-----------CceEEEEEcCCeEe--eeeeccCC-CccEEEEEcCCCccEEEeccccc-CC---
Confidence 334999999983211 13569999999997 47888731 234554 543 222 211111 00
Q ss_pred EecCCC-C-CCCCCccccceeEEEEeccc-----ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeee
Q 041981 175 DLSASK-S-SSSYNYEYITLEDLMFDSNY-----RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQH 247 (379)
Q Consensus 175 ~g~~~~-~-~~~~~~~~i~lrnl~~D~n~-----~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~ 247 (379)
.+.. . .......+..++||+|-++. +.-+|.+ .+.+..|.||.|.+. -|++..+.+. -++++|.|...
T Consensus 81 --~~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~~~r-~~~~~c~I~G~ 155 (319)
T 1gq8_A 81 --STTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-QDSLYVHSNR-QFFINCFIAGT 155 (319)
T ss_dssp --CCTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-TTCEEECSSE-EEEESCEEEES
T ss_pred --CCccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-ceeeeecCcc-EEEEecEEEee
Confidence 0000 0 00012245678899997643 2223443 577788999999986 6888887755 49999998765
Q ss_pred cccCCCCCccccceeeEEecCCcc-EEEEEEEEec-----ceeEEEc-cc--ceeeeeeEEecCceeeee--------ee
Q 041981 248 ITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSA-----AVGIMVS-GQ--ANTFSGVHCYNKATGFGG--------TG 310 (379)
Q Consensus 248 ~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g-----~~G~~v~-gq--qn~i~~i~~~n~~Tg~~G--------~G 310 (379)
.. .|-|+.. .+-+|.|..- ..|.+.. +. ...-.+..|.+|.--=.+ .-
T Consensus 156 vD---------------FIfG~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~ 220 (319)
T 1gq8_A 156 VD---------------FIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFP 220 (319)
T ss_dssp SS---------------CEEESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSC
T ss_pred ee---------------EEecCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCcccccccee
Confidence 32 1123332 5556666431 2233221 10 112234445554321111 12
Q ss_pred eEEeccc--ccceeEecceec
Q 041981 311 IYLKLPG--NTQTRIVNSYMD 329 (379)
Q Consensus 311 I~~~~~g--~~~~~I~nCyld 329 (379)
.+|=|+= .+++-+.+|||+
T Consensus 221 ~yLGRpW~~~sr~v~~~t~~~ 241 (319)
T 1gq8_A 221 TYLGRPWKEYSRTVVMQSSIT 241 (319)
T ss_dssp EEEECCSSTTCEEEEESCEEC
T ss_pred EEecccCCCcceEEEEeccCC
Confidence 4555542 788999999985
No 34
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.34 E-value=0.0039 Score=61.14 Aligned_cols=138 Identities=10% Similarity=0.127 Sum_probs=98.2
Q ss_pred cCCceEEcccceEEeeEEEEeecCCceeEeeeee-EEEecceeeeecccCCCCCcc-ccceeeEEecCCcc-EEEEEEEE
Q 041981 203 GGAISVINSLRTSIDNCYIARFTSNGILVQSGHE-TYIRNSFLGQHITAGGDPGER-NFTGTAINLMGNDN-AVTDVVIF 279 (379)
Q Consensus 203 ~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~-v~I~ns~Ig~~~~~ggd~~~~-~~~gtGI~i~gn~~-~vsD~~i~ 279 (379)
+..+++.++. +.|+++++.+..-..||+..+++ +.|++..|-.... |. .. +-+.-||++ ...+ .|.|+.|.
T Consensus 97 P~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~---d~-~~~~~NtDGidi-~s~nV~I~n~~i~ 170 (335)
T 1k5c_A 97 PHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAG---DT-KNLGHNTDGFDV-SANNVTIQNCIVK 170 (335)
T ss_dssp CCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGG---GG-GGCCCSCCSEEE-ECSSEEEESCEEE
T ss_pred CeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCC---cc-cccCCCCCeEcc-cCCeEEEEeeEEE
Confidence 4457777788 88999999998889999999999 9999999877531 11 11 335678888 7777 99999999
Q ss_pred ecceeEEEcc-cceeeeeeEEecCceeeeeeeeEEe----cccccceeEecceec--cceEEEcC--------CccEEEE
Q 041981 280 SAAVGIMVSG-QANTFSGVHCYNKATGFGGTGIYLK----LPGNTQTRIVNSYMD--YTGIVAED--------PVQLHIS 344 (379)
Q Consensus 280 ~g~~G~~v~g-qqn~i~~i~~~n~~Tg~~G~GI~~~----~~g~~~~~I~nCyld--y~~i~~~~--------~~~i~I~ 344 (379)
.+.+.+.+.. +.-+++|++|+.+ .||.+- ..+++...++||++. .+|+|+.. -.+|++.
T Consensus 171 ~gDDcIaiksg~nI~i~n~~~~~g------hGisIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ 244 (335)
T 1k5c_A 171 NQDDCIAINDGNNIRFENNQCSGG------HGISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYD 244 (335)
T ss_dssp SSSCSEEEEEEEEEEEESCEEESS------CCEEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEE
T ss_pred cCCCEEEeeCCeeEEEEEEEEECC------ccCeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEE
Confidence 9999988864 4556666666553 345542 234889999999885 34777651 2366666
Q ss_pred ceeeeecc
Q 041981 345 SSFFLGDA 352 (379)
Q Consensus 345 ~~~~~g~~ 352 (379)
+-...+..
T Consensus 245 ni~~~~v~ 252 (335)
T 1k5c_A 245 ANTISGIA 252 (335)
T ss_dssp SCEEEEEE
T ss_pred EEEEEccc
Confidence 65555543
No 35
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.29 E-value=0.0026 Score=64.81 Aligned_cols=142 Identities=7% Similarity=-0.001 Sum_probs=102.7
Q ss_pred ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEe
Q 041981 202 RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFS 280 (379)
Q Consensus 202 ~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~ 280 (379)
++..+.+.++..+.|+++++.+..--++|+..+.++.|++..|-.. +.+.-||++.+..+ .|.|+.|..
T Consensus 189 RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~----------~~NtDGidi~~s~nV~I~n~~i~~ 258 (448)
T 3jur_A 189 RPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST----------GPNNDGIDPESCKYMLIEKCRFDT 258 (448)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC----------STTCCSBCCBSCEEEEEESCEEEE
T ss_pred CceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec----------cCCCccccccCCcCEEEEeeEEEe
Confidence 4567889999999999999999877899999999999999998664 23567889888877 999999999
Q ss_pred cceeEEEcccce--------eeeeeEEecCce--eeeeeeeEEe---cccccceeEecceeccc--eEEEcC-------C
Q 041981 281 AAVGIMVSGQAN--------TFSGVHCYNKAT--GFGGTGIYLK---LPGNTQTRIVNSYMDYT--GIVAED-------P 338 (379)
Q Consensus 281 g~~G~~v~gqqn--------~i~~i~~~n~~T--g~~G~GI~~~---~~g~~~~~I~nCyldy~--~i~~~~-------~ 338 (379)
+.+++.+.+..+ ..++|.+.||.- .-+-.||.+= ..++++..++||++.-+ |+++.. -
T Consensus 259 gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~gG~v 338 (448)
T 3jur_A 259 GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYM 338 (448)
T ss_dssp SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTTCSEE
T ss_pred CCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCCCceE
Confidence 999999865311 145666665533 1111244431 23478999999998543 888753 1
Q ss_pred ccEEEEceeeeecce
Q 041981 339 VQLHISSSFFLGDAF 353 (379)
Q Consensus 339 ~~i~I~~~~~~g~~~ 353 (379)
.+|.+.+....+..+
T Consensus 339 ~nI~f~ni~m~~v~~ 353 (448)
T 3jur_A 339 ENIFFIDNVAVNVSE 353 (448)
T ss_dssp EEEEEESCEEEEESS
T ss_pred eeEEEEEEEEECCcc
Confidence 367777766666544
No 36
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.28 E-value=0.01 Score=57.88 Aligned_cols=191 Identities=19% Similarity=0.296 Sum_probs=102.5
Q ss_pred HHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE-Ecc---EE-EecCCCCCCeEEEE
Q 041981 101 EAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI-HGG---TL-RASDDFPTDGYLID 175 (379)
Q Consensus 101 ~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i-gdG---tI-~A~~~f~gd~~lI~ 175 (379)
.-||+|+++|-... ....+|+|++|+|. ..|.++.. +.++++ ++| |+ ....... +.
T Consensus 16 ~TIq~AI~aap~~~-----------~~~~~I~I~~G~Y~--E~V~I~~~-k~~Itl~G~g~~~tiI~~~~~~~-~g---- 76 (317)
T 1xg2_A 16 QTLAEAVAAAPDKS-----------KTRYVIYVKRGTYK--ENVEVASN-KMNLMIVGDGMYATTITGSLNVV-DG---- 76 (317)
T ss_dssp SSHHHHHHHSCSSC-----------SSCEEEEECSEEEE--CCEEECTT-SCSEEEEESCTTTEEEEECCCTT-TT----
T ss_pred ccHHHHHhhcccCC-----------CceEEEEEcCCEEe--eeeecCCC-CCcEEEEEcCCCCcEEEeccccc-CC----
Confidence 34999999983211 13569999999997 47888731 234554 543 22 2221111 00
Q ss_pred ecCC-CC-CCCCCccccceeEEEEeccc-----ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeec
Q 041981 176 LSAS-KS-SSSYNYEYITLEDLMFDSNY-----RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHI 248 (379)
Q Consensus 176 g~~~-~~-~~~~~~~~i~lrnl~~D~n~-----~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~ 248 (379)
.+. .. .......+..++||+|-++. +.-+|. +.+.+..|.||.|.+. -|++..+.+.. ++++|.|....
T Consensus 77 -~~t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~-v~~d~~~f~~c~f~g~-QDTLy~~~~r~-~~~~c~I~G~v 152 (317)
T 1xg2_A 77 -STTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALR-VGADMSVINRCRIDAY-QDTLYAHSQRQ-FYRDSYVTGTV 152 (317)
T ss_dssp -CCSGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEE-ECCTTEEEESCEEECS-TTCEEECSSEE-EEESCEEEESS
T ss_pred -CcccceeEEEEECCCEEEEEeEEecccCCccCceEEEE-EeCCcEEEEEeEeCcc-ccceeecCccE-EEEeeEEEece
Confidence 000 00 00011235667888886543 122334 3577788999999986 68888876554 99999987654
Q ss_pred ccCCCCCccccceeeEEecCCcc-EEEEEEEEec-----ceeEEEc-cc--ceeeeeeEEecCcee-eee-------eee
Q 041981 249 TAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSA-----AVGIMVS-GQ--ANTFSGVHCYNKATG-FGG-------TGI 311 (379)
Q Consensus 249 ~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g-----~~G~~v~-gq--qn~i~~i~~~n~~Tg-~~G-------~GI 311 (379)
. .|-|+.. ...+|.|..- ..|.+.. +. ...-.+..|.+|.-- -.. .-.
T Consensus 153 D---------------FIfG~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~ 217 (317)
T 1xg2_A 153 D---------------FIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPT 217 (317)
T ss_dssp S---------------CEEECCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCE
T ss_pred e---------------EEcCCceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeE
Confidence 2 1223333 5556665431 2333321 10 112234445554321 110 024
Q ss_pred EEeccc--ccceeEecceec
Q 041981 312 YLKLPG--NTQTRIVNSYMD 329 (379)
Q Consensus 312 ~~~~~g--~~~~~I~nCyld 329 (379)
+|=|+= .+++-+.+|||+
T Consensus 218 yLGRpW~~~sr~v~~~t~~~ 237 (317)
T 1xg2_A 218 YLGRPWKEYSRTVVMESYLG 237 (317)
T ss_dssp EEECCSSTTCEEEEESCEEC
T ss_pred EeecccCCCceEEEEecccC
Confidence 555542 688999999885
No 37
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.13 E-value=0.0038 Score=65.81 Aligned_cols=159 Identities=11% Similarity=0.030 Sum_probs=114.2
Q ss_pred ccCCceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEe
Q 041981 202 RGGAISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFS 280 (379)
Q Consensus 202 ~~~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~ 280 (379)
++..+.+.++..+.|+++++.+..--+||+..++++.|++..|... ..-+.-||++.+..+ .|.|+.|..
T Consensus 330 rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~---------~~~NtDGidi~~s~nV~I~n~~i~~ 400 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTY---------DANNGDGIEFGNSQNVMVFNNFFDT 400 (608)
T ss_dssp SCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECT---------TCTTCCSEEEESCEEEEEESCEEEC
T ss_pred CCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCC---------CCCCCCeEEecCCceEEEEeeEEec
Confidence 5668899999999999999999877899999999999999876321 123678999998888 999999999
Q ss_pred cceeEEEcc------------cceeeeeeEEecCceeeeeeeeEE----ecccccceeEecceeccc--eEEEcC-----
Q 041981 281 AAVGIMVSG------------QANTFSGVHCYNKATGFGGTGIYL----KLPGNTQTRIVNSYMDYT--GIVAED----- 337 (379)
Q Consensus 281 g~~G~~v~g------------qqn~i~~i~~~n~~Tg~~G~GI~~----~~~g~~~~~I~nCyldy~--~i~~~~----- 337 (379)
+.+++.+.. +..+|+|++|+++ .|+.+ ...++++..|.||++.-+ ||++.+
T Consensus 401 gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~g------hg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g 474 (608)
T 2uvf_A 401 GDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMG------HGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG 474 (608)
T ss_dssp SSCSEEEECCCSGGGGGSCCEEEEEEESCEECSS------SCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC
T ss_pred CCceEEecCCcCccccccccccCEEEEeEEEeCC------CCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCCC
Confidence 999988842 3445666666543 22221 123478899999988654 888753
Q ss_pred --CccEEEEceeeeecc-e-eEeeec---------------cceeeeeEEEeeeccC
Q 041981 338 --PVQLHISSSFFLGDA-F-IVLKSI---------------NGVAKGVNIVDNLFSG 375 (379)
Q Consensus 338 --~~~i~I~~~~~~g~~-~-v~l~~~---------------~~~~~~~~i~~n~f~~ 375 (379)
-.+|.+.++...+.. + |.++.. .+.++++.|-|-.|.+
T Consensus 475 G~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n 531 (608)
T 2uvf_A 475 GGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDN 531 (608)
T ss_dssp CEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEE
T ss_pred ceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEe
Confidence 358888888877763 3 333321 2456777777666543
No 38
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=96.73 E-value=0.29 Score=47.94 Aligned_cols=60 Identities=23% Similarity=0.324 Sum_probs=44.7
Q ss_pred CceeEeeecCccCCCCCchHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE--Ec
Q 041981 81 PRVYGVISYGADPTGKSDSTEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI--HG 158 (379)
Q Consensus 81 ~~v~nV~dyGA~gDG~tDdT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i--gd 158 (379)
.|++..++|||.+|-.+||+++|.+.+..- ..|++|.|.|--+ -|.+. -| + +- +.
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s~------------------~~v~i~~gvf~ss-~i~~~-~c--~-l~g~g~ 118 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNSQ------------------KAVTISDGVFSSS-GINSN-YC--N-LDGRGS 118 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTSS------------------SCEECCSEEEEEC-CEEES-CC--E-EECTTT
T ss_pred heeeecccccccCCcccCcHHHHHhhhccc------------------ccEeccccccccc-ccccc-cc--c-ccccCC
Confidence 457889999999999999999999887663 3489999999865 45554 34 1 22 34
Q ss_pred cEEEe
Q 041981 159 GTLRA 163 (379)
Q Consensus 159 GtI~A 163 (379)
|+|+-
T Consensus 119 g~~~~ 123 (542)
T 2x3h_A 119 GVLSH 123 (542)
T ss_dssp EEEEE
T ss_pred ceeee
Confidence 67665
No 39
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.60 E-value=0.11 Score=51.09 Aligned_cols=126 Identities=14% Similarity=0.247 Sum_probs=73.8
Q ss_pred HHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE-Ecc---EEEecCCCCC----CeE
Q 041981 101 EAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI-HGG---TLRASDDFPT----DGY 172 (379)
Q Consensus 101 ~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i-gdG---tI~A~~~f~g----d~~ 172 (379)
.-||+|+++|-.. + ...+|+|.+|+|. ..|.++ +.++++ ++| |+.....-.+ +.
T Consensus 19 ~TIq~Ai~aap~~-----------~-~~~~I~I~~G~Y~--E~V~I~---k~~Itl~G~g~~~tiI~~~~~~~~~~~~g- 80 (342)
T 2nsp_A 19 KTIADAIASAPAG-----------S-TPFVILIKNGVYN--ERLTIT---RNNLHLKGESRNGAVIAAATAAGTLKSDG- 80 (342)
T ss_dssp SSHHHHHHTSCSS-----------S-SCEEEEECSEEEE--CCEEEC---STTEEEEESCTTTEEEEECCCTTCBCTTS-
T ss_pred chHHHHHHhcccC-----------C-CcEEEEEeCCEEE--EEEEEe---cCeEEEEecCCCCeEEEeccccccccccc-
Confidence 3499999998321 1 2569999999997 468886 344654 543 3332111100 00
Q ss_pred EEEecCCC-C-CCCCCccccceeEEEEecccc-----------------cCCceE---EcccceEEeeEEEEeecCCcee
Q 041981 173 LIDLSASK-S-SSSYNYEYITLEDLMFDSNYR-----------------GGAISV---INSLRTSIDNCYIARFTSNGIL 230 (379)
Q Consensus 173 lI~g~~~~-~-~~~~~~~~i~lrnl~~D~n~~-----------------~~gi~~---~nSq~~~I~N~~i~~~ntdGIh 230 (379)
...+.. + ..........++||+|-++.. ...+.+ +.+.+..|.||.|.+. -|.+.
T Consensus 81 --~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~-QDTLy 157 (342)
T 2nsp_A 81 --SKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY-QATLY 157 (342)
T ss_dssp --CBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECS-TTCEE
T ss_pred --CcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecc-cceEE
Confidence 000000 0 000112456788999976541 122333 3466688999999986 67888
Q ss_pred EeeeeeEEEecceeeeec
Q 041981 231 VQSGHETYIRNSFLGQHI 248 (379)
Q Consensus 231 i~~s~~v~I~ns~Ig~~~ 248 (379)
.+. ...++++|.|....
T Consensus 158 ~~~-gr~~~~~c~I~G~v 174 (342)
T 2nsp_A 158 VSG-GRSFFSDCRISGTV 174 (342)
T ss_dssp ECS-SEEEEESCEEEESE
T ss_pred ECC-CCEEEEcCEEEece
Confidence 875 45789999988754
No 40
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.50 E-value=0.17 Score=50.23 Aligned_cols=132 Identities=15% Similarity=0.209 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCcccEEE-Ecc---EEEecCCCCCCe-EE
Q 041981 99 STEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGVGNLMI-HGG---TLRASDDFPTDG-YL 173 (379)
Q Consensus 99 dT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~gti~i-gdG---tI~A~~~f~gd~-~l 173 (379)
|=.-||+|+++|-.. + ...+|+|.+|+|. ..|.++ +.++++ ++| |+.......+.. .-
T Consensus 43 ~f~TIq~Ai~aa~~~-----------~-~~~~I~I~~G~Y~--E~v~I~---k~~itl~G~g~~~TiIt~~~~~~~~~~~ 105 (364)
T 3uw0_A 43 EFSSINAALKSAPKD-----------D-TPFIIFLKNGVYT--ERLEVA---RSHVTLKGENRDGTVIGANTAAGMLNPQ 105 (364)
T ss_dssp -CCCHHHHHHHSCSS-----------S-SCEEEEECSEEEC--CCEEEC---STTEEEEESCTTTEEEEECCCTTSBCTT
T ss_pred CcccHHHHHhhcccC-----------C-CcEEEEEeCCEEE--EEEEEc---CCeEEEEecCCCCeEEEccccccccccc
Confidence 345699999998321 1 2569999999996 356666 334543 443 332221110000 00
Q ss_pred EEecCCCC--CCCCCccccceeEEEEecccc-----------------cCCceE--E-cccceEEeeEEEEeecCCceeE
Q 041981 174 IDLSASKS--SSSYNYEYITLEDLMFDSNYR-----------------GGAISV--I-NSLRTSIDNCYIARFTSNGILV 231 (379)
Q Consensus 174 I~g~~~~~--~~~~~~~~i~lrnl~~D~n~~-----------------~~gi~~--~-nSq~~~I~N~~i~~~ntdGIhi 231 (379)
-+.++... ..........++||+|-++.. ...+.+ . ++.+..+.||.|.+. -|.+..
T Consensus 106 g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~-QDTLy~ 184 (364)
T 3uw0_A 106 GEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGY-QDTLYS 184 (364)
T ss_dssp CSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECS-BSCEEE
T ss_pred cccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEec-ccceEe
Confidence 00000000 000122456788999976541 122233 2 366788999999997 588887
Q ss_pred eeeeeEEEecceeeeec
Q 041981 232 QSGHETYIRNSFLGQHI 248 (379)
Q Consensus 232 ~~s~~v~I~ns~Ig~~~ 248 (379)
+.+..-+.++|.|....
T Consensus 185 ~~~gr~yf~~c~I~Gtv 201 (364)
T 3uw0_A 185 KTGSRSYFSDCEISGHV 201 (364)
T ss_dssp CTTCEEEEESCEEEESE
T ss_pred CCCCCEEEEcCEEEcCC
Confidence 74567899999998754
No 41
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=96.45 E-value=0.022 Score=57.41 Aligned_cols=133 Identities=16% Similarity=0.116 Sum_probs=95.6
Q ss_pred CCceEEcccceEEeeEEEEeecCCceeEee-eeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEE-Ee
Q 041981 204 GAISVINSLRTSIDNCYIARFTSNGILVQS-GHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVI-FS 280 (379)
Q Consensus 204 ~gi~~~nSq~~~I~N~~i~~~ntdGIhi~~-s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i-~~ 280 (379)
-||.+..+....|.|+.|.. ..+||++-. ++...|+++.++..- .|.||.++...+ .|.+-.+ ..
T Consensus 185 fGI~l~~a~~~~I~~N~I~e-~GNgI~L~G~~~~~~I~~N~i~~~~-----------dG~gIyl~ns~~~~I~~N~i~~~ 252 (410)
T 2inu_A 185 HALIVRGADALRVNDNMIAE-CGNCVELTGAGQATIVSGNHMGAGP-----------DGVTLLAENHEGLLVTGNNLFPR 252 (410)
T ss_dssp EEEEETTEESCEEESCEEES-SSEEEEECSCEESCEEESCEEECCT-----------TSEEEEEESEESCEEESCEECSC
T ss_pred EEEEEccCCCcEEECCEEEe-cCCceeeccccccceEecceeeecC-----------CCCEEEEEeCCCCEEECCCcccC
Confidence 46778888899999998884 478999976 788899999888763 567899887766 7888866 55
Q ss_pred cceeEEE-cccceeeeeeEEecCceee---eee--eeEEecccccceeEecceecc-------------ceEEEcCCccE
Q 041981 281 AAVGIMV-SGQANTFSGVHCYNKATGF---GGT--GIYLKLPGNTQTRIVNSYMDY-------------TGIVAEDPVQL 341 (379)
Q Consensus 281 g~~G~~v-~gqqn~i~~i~~~n~~Tg~---~G~--GI~~~~~g~~~~~I~nCyldy-------------~~i~~~~~~~i 341 (379)
+.+|+.+ ..+.+.+++=+|.+..+|. +.+ ... ++.|++......| -||..+...+-
T Consensus 253 ~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~s~~~~n~-----v~~N~f~~~~~g~a~M~s~~~~~d~~~Gill~~~~~~ 327 (410)
T 2inu_A 253 GRSLIEFTGCNRCSVTSNRLQGFYPGMLRLLNGCKENL-----ITANHIRRTNEGYPPFIGRGNGLDDLYGVVHIAGDNN 327 (410)
T ss_dssp SSEEEEEESCBSCEEESCEEEESSSCSEEEESSCBSCE-----EESCEEEEECCCSGGGTTCCCSCCTTSCSEEEESSSC
T ss_pred cceEEEEEccCCCEEECCEEecceeEEEEEEcCCCCCE-----EECCEEeccCCceeeeeccCCCCCccEeeEEEeecCc
Confidence 8999988 4456666666666555443 222 111 4556655554432 38888888899
Q ss_pred EEEceeeeecce
Q 041981 342 HISSSFFLGDAF 353 (379)
Q Consensus 342 ~I~~~~~~g~~~ 353 (379)
.|++|.|.....
T Consensus 328 ~i~~N~i~~~~~ 339 (410)
T 2inu_A 328 LISDNLFAYNVP 339 (410)
T ss_dssp EEEEEEEEEECC
T ss_pred EEECCEEEeecC
Confidence 999999887643
No 42
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=95.96 E-value=0.35 Score=47.31 Aligned_cols=142 Identities=14% Similarity=0.195 Sum_probs=85.7
Q ss_pred cCCceEEcccceEEeeEEEEee---cCCceeEee-eeeEEEecceeeeecccCCCCCccccceeeEEecC-Ccc-EEEEE
Q 041981 203 GGAISVINSLRTSIDNCYIARF---TSNGILVQS-GHETYIRNSFLGQHITAGGDPGERNFTGTAINLMG-NDN-AVTDV 276 (379)
Q Consensus 203 ~~gi~~~nSq~~~I~N~~i~~~---ntdGIhi~~-s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~g-n~~-~vsD~ 276 (379)
+.++.+.++..+-|+|+.|.+. ..|+|.+.. ++++-|.+|.+.-... ++....-+++ -+++.. .+. +|+.+
T Consensus 94 G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~--g~~~~~~~Dg-l~di~~~s~~VTISnn 170 (326)
T 3vmv_A 94 GIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFP--GNGDSDYYDG-LVDMKRNAEYITVSWN 170 (326)
T ss_dssp SCCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSS--TTSCTTSSCC-SEEECTTCEEEEEESC
T ss_pred CcEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEecccc--CCcCccccCc-ceEecCCCceEEEEce
Confidence 3467777788888888888876 478899986 8899999998853210 1111111122 245443 444 88888
Q ss_pred EEEecceeEEEcccce-e--eeeeEEecCceeeeeeeeEEeccc--ccceeEecceec---cceEEEcCCccEEEEceee
Q 041981 277 VIFSAAVGIMVSGQAN-T--FSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNSYMD---YTGIVAEDPVQLHISSSFF 348 (379)
Q Consensus 277 ~i~~g~~G~~v~gqqn-~--i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nCyld---y~~i~~~~~~~i~I~~~~~ 348 (379)
.|.....+.++++... . -.+|.+..+ ......-+.|- +...++.|.|.. ..++-.....++-+.+|.|
T Consensus 171 ~f~~h~k~~LiG~sd~~~~~~~~vT~~~N----~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F 246 (326)
T 3vmv_A 171 KFENHWKTMLVGHTDNASLAPDKITYHHN----YFNNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYF 246 (326)
T ss_dssp EEEEEEECEEECSSSCGGGCCEEEEEESC----EEEEEEECTTEEESCEEEEESCEEEEESSCSEEEETTCEEEEESCEE
T ss_pred EEecCceEEEECCCCCCcccCccEEEEee----EecCCcCcCCcccCCcEEEEccEEECCCceEEeecCCcEEEEEceEE
Confidence 8887777777775321 1 023444333 11222222121 234566666652 3477777778999999999
Q ss_pred eec
Q 041981 349 LGD 351 (379)
Q Consensus 349 ~g~ 351 (379)
...
T Consensus 247 ~~~ 249 (326)
T 3vmv_A 247 DNV 249 (326)
T ss_dssp EEE
T ss_pred ECC
Confidence 987
No 43
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.80 E-value=0.071 Score=55.19 Aligned_cols=233 Identities=14% Similarity=0.144 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHhcCCCCCCCccccccccCccEEEEcCCEEEEecceEecCCCc--ccEEEEccEEEecCCCCCCeEEEEe
Q 041981 99 STEAILKALSDAFNGPREGSLMEGISNLGGAEIHLEGGNYLISKPLRLPDAGV--GNLMIHGGTLRASDDFPTDGYLIDL 176 (379)
Q Consensus 99 dT~Aiq~Ai~~A~~~~~~~~~~~g~t~~ggavV~lP~GtYlVs~pI~f~gpc~--gti~igdGtI~A~~~f~gd~~lI~g 176 (379)
+.+.||+|++.|- .+-+|+|++|+|.- .+|.+.+++. ..+++ ++. .....+|++
T Consensus 30 ~~~~Lq~Ai~~A~---------------pGDtI~L~~GtY~~-~~i~i~~sGt~~~pItl-----~~~---~~~~~vi~G 85 (506)
T 1dbg_A 30 SNETLYQVVKEVK---------------PGGLVQIADGTYKD-VQLIVSNSGKSGLPITI-----KAL---NPGKVFFTG 85 (506)
T ss_dssp SHHHHHHHHHHCC---------------TTCEEEECSEEEET-CEEEECCCCBTTBCEEE-----EES---STTSEEEEE
T ss_pred CHHHHHHHHHhCC---------------CCCEEEECCCEEec-ceEEEecCCcCCCCEEE-----ECC---CCCccEEeC
Confidence 4667999999882 25799999999973 3677754331 12333 221 001123333
Q ss_pred cCCCCCCCCCccccceeEEEEecccc---------cCCceEEcccceEEeeEEEEeecCCc--eeEe--------eeeeE
Q 041981 177 SASKSSSSYNYEYITLEDLMFDSNYR---------GGAISVINSLRTSIDNCYIARFTSNG--ILVQ--------SGHET 237 (379)
Q Consensus 177 ~~~~~~~~~~~~~i~lrnl~~D~n~~---------~~gi~~~nSq~~~I~N~~i~~~ntdG--Ihi~--------~s~~v 237 (379)
... ......++.+++|+|..... ..++ .+.+.+..|+||+|.+. .+| +++. .+++.
T Consensus 86 ~~~---l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~i-av~G~~~~I~nn~I~~~-~~gd~i~i~~~~~~~~l~g~~n 160 (506)
T 1dbg_A 86 DAK---VELRGEHLILEGIWFKDGNRAIQAWKSHGPGLV-AIYGSYNRITACVFDCF-DEANSAYITTSLTEDGKVPQHC 160 (506)
T ss_dssp SCE---EEECSSSEEEESCEEEEECCCTTTCCTTSCCSE-EECSSSCEEESCEEESC-CSSCSCSEEECCCTTCCCCCSC
T ss_pred Cce---EEEEcCCEEEECeEEECCCcceeeeecccccce-EEecCCeEEEeeEEEcC-CCCceeeEeecccceeeecccc
Confidence 210 00112467788888865321 0122 23356788999999987 334 6664 56677
Q ss_pred EEecceeeeecccCCCCCcccccee-eEEecC--------CccEEEEEEEEec------ceeEEEcc-----cceeeeee
Q 041981 238 YIRNSFLGQHITAGGDPGERNFTGT-AINLMG--------NDNAVTDVVIFSA------AVGIMVSG-----QANTFSGV 297 (379)
Q Consensus 238 ~I~ns~Ig~~~~~ggd~~~~~~~gt-GI~i~g--------n~~~vsD~~i~~g------~~G~~v~g-----qqn~i~~i 297 (379)
+|++|.|..-...| .. ..|- ||.+.+ +...|.+..|..- ..++.++. +.+.+++=
T Consensus 161 ~I~~N~I~Gk~~~G----~~-i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN 235 (506)
T 1dbg_A 161 RIDHCSFTDKITFD----QV-INLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSN 235 (506)
T ss_dssp EEESCEEECCCSSS----CS-EEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESC
T ss_pred EEECcEEECCcCcc----eE-EecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECC
Confidence 89999876532111 10 0111 444443 1225555555432 12344432 35666666
Q ss_pred EEecCceeeeeeeeEEec---ccccceeEecceeccceEEEcCCccEEEEceeeeecc------eeEeeeccceeeeeEE
Q 041981 298 HCYNKATGFGGTGIYLKL---PGNTQTRIVNSYMDYTGIVAEDPVQLHISSSFFLGDA------FIVLKSINGVAKGVNI 368 (379)
Q Consensus 298 ~~~n~~Tg~~G~GI~~~~---~g~~~~~I~nCyldy~~i~~~~~~~i~I~~~~~~g~~------~v~l~~~~~~~~~~~i 368 (379)
.|++|.. |..|.... .-++.|++.+| .+ +|..+....-.|.+|.|.+++ -|.+... +..|
T Consensus 236 ~f~~~~g---g~aim~skS~~n~i~~N~~~~~--~g-gi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~-----~~~I 304 (506)
T 1dbg_A 236 LFMRQDS---EAEIITSKSQENVYYGNTYLNC--QG-TMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGS-----RHVI 304 (506)
T ss_dssp EEEEECS---SSEEEEEESBSCEEESCEEESC--SS-EEEEEECSSCEEESCEEEECSSSSCBCCEEECSB-----SCEE
T ss_pred EEEeccC---cEEEEEEecCCEEEECCEEEcc--cC-cEEEeecCccEEECCEEECCcCccCceEEEEECC-----CCEE
Confidence 6766643 34443322 22688999999 55 788888888889999999975 2333211 4488
Q ss_pred EeeeccCC
Q 041981 369 VDNLFSGK 376 (379)
Q Consensus 369 ~~n~f~~~ 376 (379)
.+|.|.+.
T Consensus 305 ~nN~f~~~ 312 (506)
T 1dbg_A 305 ACNYFELS 312 (506)
T ss_dssp ESCEEEES
T ss_pred ECCEEECC
Confidence 99998875
No 44
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=95.73 E-value=0.68 Score=45.79 Aligned_cols=137 Identities=12% Similarity=0.153 Sum_probs=74.3
Q ss_pred cCCceEE-cccceEEeeEEEEeec------CCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEE
Q 041981 203 GGAISVI-NSLRTSIDNCYIARFT------SNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVT 274 (379)
Q Consensus 203 ~~gi~~~-nSq~~~I~N~~i~~~n------tdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vs 274 (379)
+.+|.+. ++..+-|+|++|.+.+ .|+|.+..++++-|.+|.+.-. +|.-... | ..+++. +|+
T Consensus 123 G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~----~d~~~~~----g--~~~s~~VTIS 192 (359)
T 1idk_A 123 GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI----GRQHYVL----G--TSADNRVSLT 192 (359)
T ss_dssp SCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE----SSCSEEE----C--CCTTCEEEEE
T ss_pred cceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC----CCCcEEe----c--ccCcceEEEE
Confidence 3456665 5666777777777743 3788887778888888877643 1111100 0 234444 777
Q ss_pred EEEEEecc-----------eeEEEcc--cceeeeeeEEecCceeeeeeeeEEeccccc-ceeEecceec---cceEEEcC
Q 041981 275 DVVIFSAA-----------VGIMVSG--QANTFSGVHCYNKATGFGGTGIYLKLPGNT-QTRIVNSYMD---YTGIVAED 337 (379)
Q Consensus 275 D~~i~~g~-----------~G~~v~g--qqn~i~~i~~~n~~Tg~~G~GI~~~~~g~~-~~~I~nCyld---y~~i~~~~ 337 (379)
.+.|.+.. .+.++.+ .+.++.+=+|.++.. +.=.+. .. ..++.|.|.. ..+|-+..
T Consensus 193 nn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~----R~Pr~r---~g~~~hv~NN~~~n~~~~~i~~~~ 265 (359)
T 1idk_A 193 NNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSG----RSPKVQ---DNTLLHAVNNYWYDISGHAFEIGE 265 (359)
T ss_dssp SCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCS----CTTEEC---TTCEEEEESCEEEEEEEEEEEECT
T ss_pred CcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcc----cCcccc---CCceEEEECCEEecccceEEeccC
Confidence 77775422 1333332 234444444443321 110110 11 2455555542 24666777
Q ss_pred CccEEEEceeeeecceeEe
Q 041981 338 PVQLHISSSFFLGDAFIVL 356 (379)
Q Consensus 338 ~~~i~I~~~~~~g~~~v~l 356 (379)
..++.|.+|.|....+-+.
T Consensus 266 ~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp TCEEEEESCEEEEEEEEEE
T ss_pred CcEEEEEccEEECCCCcee
Confidence 7789999999988766554
No 45
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=95.61 E-value=0.18 Score=49.70 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=22.2
Q ss_pred ceeEecceec---cceEEEcCCccEEEEceeeeeccee
Q 041981 320 QTRIVNSYMD---YTGIVAEDPVQLHISSSFFLGDAFI 354 (379)
Q Consensus 320 ~~~I~nCyld---y~~i~~~~~~~i~I~~~~~~g~~~v 354 (379)
..++.|.|.. ..++-.....++.+.+|.|....+.
T Consensus 237 ~~hv~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~~~ 274 (346)
T 1pxz_A 237 LVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSES 274 (346)
T ss_dssp EEEEESCEECCCSSCSEEEESCCEEEEESCEEECCSCG
T ss_pred eEEEEeeEEEcccceEEeccCCceEEEECCEEECCCCC
Confidence 4455555543 2356566667888889988886543
No 46
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=95.56 E-value=0.14 Score=51.32 Aligned_cols=129 Identities=17% Similarity=0.192 Sum_probs=83.1
Q ss_pred CceEEcccceEEeeEEEEeecCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCc--cEEEEEEEEecc
Q 041981 205 AISVINSLRTSIDNCYIARFTSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGND--NAVTDVVIFSAA 282 (379)
Q Consensus 205 gi~~~nSq~~~I~N~~i~~~ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~--~~vsD~~i~~g~ 282 (379)
++.+ .+..++|++++|.+....||+++. .+..|++|.+.... .+||.+.+.. +.|.++.+.+-.
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~------------~~GI~l~~~~s~n~I~nn~i~~N~ 174 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR------------NTGLEINNGGSYNTVINSDAYRNY 174 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS------------SCSEEECTTCCSCEEESCEEECCC
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC------------ceeEEEEcccCCeEEEceEEEccc
Confidence 4444 667799999999888788999986 56679999886542 2578887643 488889886532
Q ss_pred ---------eeEEEc---ccceeeeeeEEecCceeeeeeeeEEecccccceeEecceec---------------cceEEE
Q 041981 283 ---------VGIMVS---GQANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYMD---------------YTGIVA 335 (379)
Q Consensus 283 ---------~G~~v~---gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyld---------------y~~i~~ 335 (379)
+|+.+. +..|.+++.++++. ...||.++.. .....|.||..- -+|+.+
T Consensus 175 d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N----~ddGidl~~~-~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~l 249 (400)
T 1ru4_A 175 DPKKNGSMADGFGPKQKQGPGNRFVGCRAWEN----SDDGFDLFDS-PQKVVIENSWAFRNGINYWNDSAFAGNGNGFKL 249 (400)
T ss_dssp CTTTTTSSCCSEEECTTCCSCCEEESCEEESC----SSCSEECTTC-CSCCEEESCEEESTTCCCSCCTTCCCCCCSEEC
T ss_pred CccccCcccceEEEEecccCCeEEECCEEeec----CCCcEEEEec-CCCEEEEeEEEECCccccccccccccCCCCEEE
Confidence 466553 23466666666544 2356666532 244678888641 123443
Q ss_pred ---cCCccEEEEceeeeecc
Q 041981 336 ---EDPVQLHISSSFFLGDA 352 (379)
Q Consensus 336 ---~~~~~i~I~~~~~~g~~ 352 (379)
..+....|.+|...++.
T Consensus 250 gg~~~~~~~~v~nn~a~~N~ 269 (400)
T 1ru4_A 250 GGNQAVGNHRITRSVAFGNV 269 (400)
T ss_dssp CCTTCCCCCEEESCEEESCS
T ss_pred eccCCcCCEEEEeeEEECCc
Confidence 24456777777776663
No 47
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=95.53 E-value=1.2 Score=44.07 Aligned_cols=144 Identities=17% Similarity=0.203 Sum_probs=76.8
Q ss_pred cCCceEE-cccceEEeeEEEEeecC------CceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEE
Q 041981 203 GGAISVI-NSLRTSIDNCYIARFTS------NGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVT 274 (379)
Q Consensus 203 ~~gi~~~-nSq~~~I~N~~i~~~nt------dGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vs 274 (379)
+.++.+. ++..+-|+|++|.+.++ |+|.+..++++-|.+|.+.-. +|.-..+ + ..++++ +|+
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~----~d~~~~~----~--~~~s~~vTIS 192 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI----GRQHIVL----G--TSADNRVTIS 192 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE----SSCSEEE----C--SSCCEEEEEE
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc----CcCceee----c--ccccccEEEE
Confidence 3456666 67777777777777533 778887778888888877653 1211100 0 123334 666
Q ss_pred EEEEEecc-----------eeEEEccc--ceeeeeeEEecCceeeeeeeeEEecccccceeEecceec---cceEEEcCC
Q 041981 275 DVVIFSAA-----------VGIMVSGQ--ANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYMD---YTGIVAEDP 338 (379)
Q Consensus 275 D~~i~~g~-----------~G~~v~gq--qn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyld---y~~i~~~~~ 338 (379)
.+.|.+.. .+.++.++ ..++.+=.|.++... .=.+. +....++.|.|.. ..++-....
T Consensus 193 nn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R----~Pr~r--~~~~~hv~NN~~~n~~~~a~~~~~~ 266 (359)
T 1qcx_A 193 YSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGR----MPKVQ--GNTLLHAVNNLFHNFDGHAFEIGTG 266 (359)
T ss_dssp SCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSC----TTEEC--SSEEEEEESCEEEEEEEEEEEECTT
T ss_pred CcEecCCccccccCcccccceeEEecCCCCeehcccEeccCccc----Cceec--CCceEEEEccEEECccCeEEecCCC
Confidence 76665421 24444332 333333333332111 00000 0123555666543 235666677
Q ss_pred ccEEEEceeeeecceeEeeeccce
Q 041981 339 VQLHISSSFFLGDAFIVLKSINGV 362 (379)
Q Consensus 339 ~~i~I~~~~~~g~~~v~l~~~~~~ 362 (379)
.++-+.+|.|....+.+.....|.
T Consensus 267 ~~i~~e~N~F~~~~~~~~~~~~g~ 290 (359)
T 1qcx_A 267 GYVLAEGNVFQDVNVVVETPISGQ 290 (359)
T ss_dssp EEEEEESCEEEEEEEEECSSCSSE
T ss_pred ceEEEEeeEEECCCcccCcCCCCc
Confidence 789999999988876654333443
No 48
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.07 E-value=0.66 Score=45.25 Aligned_cols=158 Identities=15% Similarity=0.167 Sum_probs=79.2
Q ss_pred CceEE-cccceEEeeEEEEeec----CCceeEe-----eeeeEEEecceeeeec-ccCCCCCccccceeeEEecC-Ccc-
Q 041981 205 AISVI-NSLRTSIDNCYIARFT----SNGILVQ-----SGHETYIRNSFLGQHI-TAGGDPGERNFTGTAINLMG-NDN- 271 (379)
Q Consensus 205 gi~~~-nSq~~~I~N~~i~~~n----tdGIhi~-----~s~~v~I~ns~Ig~~~-~~ggd~~~~~~~gtGI~i~g-n~~- 271 (379)
++.+. ++..+-|+|++|.+.+ .|+|.+. .+++|-|.+|.+.-.. +|. ..+..-+++. |++.. ++.
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~-~~~~~~~Dg~-idi~~~s~~V 164 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS-GAGDASFDGG-IDMKKGVHHV 164 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT-TCTTCSSCCS-EEEESSCEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc-cCCcceeecc-cccccCcceE
Confidence 44444 4555666666666653 5777777 4777777777774211 221 1111122332 45443 334
Q ss_pred EEEEEEEEecceeEEEccc---------ceeeeeeEEecCceeeeeeeeEEecccccceeEeccee---ccceEEEcCCc
Q 041981 272 AVTDVVIFSAAVGIMVSGQ---------ANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYM---DYTGIVAEDPV 339 (379)
Q Consensus 272 ~vsD~~i~~g~~G~~v~gq---------qn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyl---dy~~i~~~~~~ 339 (379)
+|+.+.|.....++++++. +-++.+=+|.++. .+.=.+ | +...++.|.|. ...++-+....
T Consensus 165 TISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~----~R~Pr~-r--~G~~hv~NN~~~n~~~~~i~~~~~~ 237 (330)
T 2qy1_A 165 TVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVE----SRVPLQ-R--FGLSHIYNNYFNNVTTSGINVRMGG 237 (330)
T ss_dssp EEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEE----ECTTEE-E--SSEEEEESCEEEEECSCSEEEETTC
T ss_pred EEEcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCC----CCCCce-e--cceEEEEeeEEEcccceEeccCCCc
Confidence 7777777666666666542 2222222222211 011011 1 12344555544 23466666677
Q ss_pred cEEEEceeeeecceeEeeeccceeeeeEEEee
Q 041981 340 QLHISSSFFLGDAFIVLKSINGVAKGVNIVDN 371 (379)
Q Consensus 340 ~i~I~~~~~~g~~~v~l~~~~~~~~~~~i~~n 371 (379)
++-+.+|.|....+.+.+.-..........+|
T Consensus 238 ~i~~e~N~F~~~~~p~~~~~~~~~g~~~~~~n 269 (330)
T 2qy1_A 238 IAKIESNYFENIKNPVTSRDSSEIGYWDLINN 269 (330)
T ss_dssp EEEEESCEEEEEESSEEECSSSSBCEEEEESC
T ss_pred EEEEEccEEECCCCceeeccCCCceeEEEeCC
Confidence 89999999987766444332222233444556
No 49
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=94.64 E-value=0.4 Score=49.95 Aligned_cols=105 Identities=7% Similarity=-0.005 Sum_probs=71.5
Q ss_pred EcccceEEeeEEEEeecCCceeEee-e-ee--EEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecce
Q 041981 209 INSLRTSIDNCYIARFTSNGILVQS-G-HE--TYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAV 283 (379)
Q Consensus 209 ~nSq~~~I~N~~i~~~ntdGIhi~~-s-~~--v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~ 283 (379)
.+++.+.|+++++.+.----+|+.. + .+ +.|++..+-... .+ +.-||++. .+ .|.||.|..+.+
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-------~~--NTDGidi~--~nV~I~n~~i~~gDD 358 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-------YG--QTDGLEMY--PGTILQDVFYHTDDD 358 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-------BT--TCCCCBCC--TTCEEEEEEEEESSC
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-------CC--CCCccccc--CCEEEEeeEEeCCCC
Confidence 7788888888888886555566443 3 36 888888763311 01 34677877 55 999999999999
Q ss_pred eEEEcccceeeeeeEEecCceeeeeee-eEE--ecccccceeEeccee
Q 041981 284 GIMVSGQANTFSGVHCYNKATGFGGTG-IYL--KLPGNTQTRIVNSYM 328 (379)
Q Consensus 284 G~~v~gqqn~i~~i~~~n~~Tg~~G~G-I~~--~~~g~~~~~I~nCyl 328 (379)
.+-+..++-+|+|++|+.+. |-+ |.+ ....+++..|+||+|
T Consensus 359 cIaIks~NI~I~n~~~~~~~----g~~~IsiGs~~~~V~NV~v~n~~i 402 (549)
T 1x0c_A 359 GLKMYYSNVTARNIVMWKES----VAPVVEFGWTPRNTENVLFDNVDV 402 (549)
T ss_dssp CEECCSSSEEEEEEEEEECS----SSCSEECCBSCCCEEEEEEEEEEE
T ss_pred EEEECCCCEEEEeeEEEcCC----CCceEEECCCCCcEEEEEEEeeEE
Confidence 99998877777888776432 111 211 123378888999987
No 50
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=93.89 E-value=0.73 Score=45.31 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=35.9
Q ss_pred ccceeEEEEeccc----------ccCCceEEcccceEEeeEEEEeecCCc-eeEe-eeeeEEEecceeeeec
Q 041981 189 YITLEDLMFDSNY----------RGGAISVINSLRTSIDNCYIARFTSNG-ILVQ-SGHETYIRNSFLGQHI 248 (379)
Q Consensus 189 ~i~lrnl~~D~n~----------~~~gi~~~nSq~~~I~N~~i~~~ntdG-Ihi~-~s~~v~I~ns~Ig~~~ 248 (379)
.+-+|||.|.... ...+|.+..+..+.||.|.|... .|| +.+. .+..+.|++|.+..|-
T Consensus 92 NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-~Dg~idi~~~s~~vTISnn~f~~h~ 162 (340)
T 3zsc_A 92 NVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-NDGAVDIKKYSNYITVSWNKFVDHD 162 (340)
T ss_dssp EEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-SSCSEEEETTCEEEEEESCEEESCS
T ss_pred eEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-CccceEEecCCceEEEECcEeccCc
Confidence 4456666665321 23456666677777777777765 555 4443 3577777777777653
No 51
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=93.72 E-value=1.5 Score=43.18 Aligned_cols=151 Identities=12% Similarity=0.092 Sum_probs=70.0
Q ss_pred ceEEcccceEEeeEEEEee-----cCCceeEeeeeeEEEecceeeeec-ccCC-CCCccccceeeEEec-CCcc-EEEEE
Q 041981 206 ISVINSLRTSIDNCYIARF-----TSNGILVQSGHETYIRNSFLGQHI-TAGG-DPGERNFTGTAINLM-GNDN-AVTDV 276 (379)
Q Consensus 206 i~~~nSq~~~I~N~~i~~~-----ntdGIhi~~s~~v~I~ns~Ig~~~-~~gg-d~~~~~~~gtGI~i~-gn~~-~vsD~ 276 (379)
|.+.++..+-|+|++|.+. ..|+|.+..+++|-|.+|.+.-.. +|-+ ..++..++|. +++. ++++ +|+.+
T Consensus 105 l~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl-~di~~~s~~VTISnn 183 (353)
T 1air_A 105 IWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESA-VDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCS-EEEESSCCEEEEESC
T ss_pred EEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccc-eeeecccCcEEEEee
Confidence 4444455555555555543 246666666666666666554210 1000 0011112332 4443 3334 66666
Q ss_pred EEEecceeEEEccc-ceeeeeeEEecCcee-eeeeeeEEecccccceeEeccee---ccceEEEcCCccEEEEceeeeec
Q 041981 277 VIFSAAVGIMVSGQ-ANTFSGVHCYNKATG-FGGTGIYLKLPGNTQTRIVNSYM---DYTGIVAEDPVQLHISSSFFLGD 351 (379)
Q Consensus 277 ~i~~g~~G~~v~gq-qn~i~~i~~~n~~Tg-~~G~GI~~~~~g~~~~~I~nCyl---dy~~i~~~~~~~i~I~~~~~~g~ 351 (379)
.|.....+..++.. ...-.+|.+..+-=. ...+.-.+ | +...++.|.|. ...++-.....++-+.+|.|...
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~-r--~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~ 260 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQ-R--GGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKA 260 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEE-E--SSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEE
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCC-c--CceEEEEccEEECCCCceeccCCCcEEEEEceEEECC
Confidence 66554444444432 111122333222000 01111111 1 23445555554 23466666677899999999987
Q ss_pred ceeEeeecc
Q 041981 352 AFIVLKSIN 360 (379)
Q Consensus 352 ~~v~l~~~~ 360 (379)
.+-+.+...
T Consensus 261 ~~p~~~~~~ 269 (353)
T 1air_A 261 INPVTSRYD 269 (353)
T ss_dssp ESSEEECSS
T ss_pred CCceEecCC
Confidence 776655433
No 52
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=93.53 E-value=1.3 Score=43.67 Aligned_cols=15 Identities=13% Similarity=-0.026 Sum_probs=11.0
Q ss_pred CCccEEEEceeeeec
Q 041981 337 DPVQLHISSSFFLGD 351 (379)
Q Consensus 337 ~~~~i~I~~~~~~g~ 351 (379)
...++-+.+|.|...
T Consensus 265 ~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 265 TSGSILSESNSFTLS 279 (355)
T ss_pred CCcEEEEEccEEECC
Confidence 345788888888865
No 53
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=92.95 E-value=0.39 Score=50.70 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=39.0
Q ss_pred EEEEEEEEe-cceeEEEcc-cceeeeeeEEecCceeeeeeeeEEecccccceeEecceec--cceEEEc------CCccE
Q 041981 272 AVTDVVIFS-AAVGIMVSG-QANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYMD--YTGIVAE------DPVQL 341 (379)
Q Consensus 272 ~vsD~~i~~-g~~G~~v~g-qqn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyld--y~~i~~~------~~~~i 341 (379)
.|.||.|.. +.+++.+.+ +.-+|++++|++....-.+.||.+- -+.....|.||++. ..||++. ...+|
T Consensus 186 ~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIG-sgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v~NV 264 (609)
T 3gq8_A 186 WIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEID-DGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNI 264 (609)
T ss_dssp EEESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEEC-TTCEEEEEESEEEESSSEEEEEEECTTSCCCEEE
T ss_pred EEEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEcc-CCcccEEEEeeEEECCCCEEEEEecCCCCccccE
Confidence 666666644 666666643 3444555555332100013444443 12345566666553 3466654 23367
Q ss_pred EEEceeeeec
Q 041981 342 HISSSFFLGD 351 (379)
Q Consensus 342 ~I~~~~~~g~ 351 (379)
+|.+|.+..+
T Consensus 265 ~I~n~vs~~n 274 (609)
T 3gq8_A 265 SINGHMSVED 274 (609)
T ss_dssp EEEEEEEESC
T ss_pred EEECCEeecC
Confidence 7777655444
No 54
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=91.98 E-value=4.6 Score=39.87 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=25.8
Q ss_pred eEEEcCCccEEEEceeeeecce------eEeeeccceeeeeEEEeeeccCC
Q 041981 332 GIVAEDPVQLHISSSFFLGDAF------IVLKSINGVAKGVNIVDNLFSGK 376 (379)
Q Consensus 332 ~i~~~~~~~i~I~~~~~~g~~~------v~l~~~~~~~~~~~i~~n~f~~~ 376 (379)
++-+....+|-+.+|.|..... .+++.-++. .+.-.+|+|+|.
T Consensus 271 a~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~~~~~~--~~~~~gn~~~g~ 319 (361)
T 1pe9_A 271 SFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGS--IFSDNGSVLNGS 319 (361)
T ss_dssp SEEECTTCEEEEESCEEEEETCCGGGGGGGEEESSCC--EEEEESCEETTE
T ss_pred EecCCCCcEEEEECCEEECCCCccccCceeEEecCCc--EEEecCccccCc
Confidence 4444556688899999987622 133433333 235677887764
No 55
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=91.74 E-value=0.67 Score=45.57 Aligned_cols=130 Identities=14% Similarity=0.174 Sum_probs=81.8
Q ss_pred CceEEcccceEEeeEEEEee-----------cCCceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEec-CCcc-
Q 041981 205 AISVINSLRTSIDNCYIARF-----------TSNGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLM-GNDN- 271 (379)
Q Consensus 205 gi~~~nSq~~~I~N~~i~~~-----------ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~-gn~~- 271 (379)
+|.+.++..+-|+|++|.+. ..|+|.+..++++-|.+|.+.-... + -|++. +.++
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~D-----g-------~idi~~~s~~v 151 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGND-----G-------AVDIKKYSNYI 151 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSS-----C-------SEEEETTCEEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCc-----c-------ceEEecCCceE
Confidence 44555666777788877764 4799999999999999998876521 1 13443 3445
Q ss_pred EEEEEEEEecceeEEEccc------------ceeeeeeEEecCceeeeeeeeEEecccccceeEecceecc---------
Q 041981 272 AVTDVVIFSAAVGIMVSGQ------------ANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYMDY--------- 330 (379)
Q Consensus 272 ~vsD~~i~~g~~G~~v~gq------------qn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyldy--------- 330 (379)
+|+.+.|.....++.++.. +-++.+=+|.++... .=.+ | +...++.|.|..-
T Consensus 152 TISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R----~Pr~-r--~G~~Hv~NN~~~n~~~~~~~~~ 224 (340)
T 3zsc_A 152 TVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQR----MPRI-R--FGMAHVFNNFYSMGLRTGVSGN 224 (340)
T ss_dssp EEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBC----TTEE-E--SSEEEEESCEEECCCCCSCSSC
T ss_pred EEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCC----CCcc-c--CCeEEEEccEEECCcccccccc
Confidence 8888888776666666542 233333334333211 0011 1 1234555555432
Q ss_pred ----ceEEEcCCccEEEEceeeeecce
Q 041981 331 ----TGIVAEDPVQLHISSSFFLGDAF 353 (379)
Q Consensus 331 ----~~i~~~~~~~i~I~~~~~~g~~~ 353 (379)
.+|-+....++.+.+|.|....+
T Consensus 225 ~~~~yai~~~~~a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 225 VFPIYGVASAMGAKVHVEGNYFMGYGA 251 (340)
T ss_dssp CSCCEEEEEETTCEEEEESCEEECSCH
T ss_pred ceeeeeEecCCCCEEEEECcEEECCCc
Confidence 27777778899999999998876
No 56
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=91.45 E-value=2.4 Score=42.72 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=73.3
Q ss_pred CCceEEcccceEEeeEEEEee-------------------cCCceeEeeeeeEEEecceeeeecccCCCC----Cc-cc-
Q 041981 204 GAISVINSLRTSIDNCYIARF-------------------TSNGILVQSGHETYIRNSFLGQHITAGGDP----GE-RN- 258 (379)
Q Consensus 204 ~gi~~~nSq~~~I~N~~i~~~-------------------ntdGIhi~~s~~v~I~ns~Ig~~~~~ggd~----~~-~~- 258 (379)
.+|++.++..+-|+|+.|.+. ..|+|.+..+++|-|.+|.+.-......+. |. +.
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 455666666677777777642 247788888888888888776421100000 00 00
Q ss_pred cceeeEEec-CCcc-EEEEEEEEecceeEEEcccce-e----eeeeEEecCceeeeeeeeEEeccc--ccceeEecceec
Q 041981 259 FTGTAINLM-GNDN-AVTDVVIFSAAVGIMVSGQAN-T----FSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNSYMD 329 (379)
Q Consensus 259 ~~gtGI~i~-gn~~-~vsD~~i~~g~~G~~v~gqqn-~----i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nCyld 329 (379)
.+| -|++. +++. +|+.+.|.....++++++.-. . -.+|.+..+ .+ ....-+.|- +-..++-|.|.+
T Consensus 228 ~DG-l~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN--~f--~~~~~R~Pr~R~G~~Hv~NN~~~ 302 (416)
T 1vbl_A 228 HDG-ALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHN--YY--KNVTQRLPRVRFGQVHIYNNYYE 302 (416)
T ss_dssp CCC-SEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESC--EE--EEEEECSSEESSCEEEEESCEEE
T ss_pred ccc-ceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECc--Ee--cCCccCCcccccceEEEEcceEE
Confidence 111 13444 3344 777777777666666664311 0 012333332 11 111111111 224566666653
Q ss_pred --------c-ceEEEcCCccEEEEceeeeec
Q 041981 330 --------Y-TGIVAEDPVQLHISSSFFLGD 351 (379)
Q Consensus 330 --------y-~~i~~~~~~~i~I~~~~~~g~ 351 (379)
| -+|-+....+|-+.+|.|...
T Consensus 303 n~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 303 FSNLADYDFQYAWGVGVFSQIYAQNNYFSFD 333 (416)
T ss_dssp ECTTSSSCCCCSEEEETTCEEEEESCEEEES
T ss_pred CCCCCcccceeEeccCCCcEEEEECCEEECC
Confidence 1 145445566888899999865
No 57
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=91.37 E-value=0.73 Score=49.85 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=40.0
Q ss_pred CccccceeEEEEeccc-------------ccCCceEEcccceEEeeEEEEeecCC-----------ceeEee------ee
Q 041981 186 NYEYITLEDLMFDSNY-------------RGGAISVINSLRTSIDNCYIARFTSN-----------GILVQS------GH 235 (379)
Q Consensus 186 ~~~~i~lrnl~~D~n~-------------~~~gi~~~nSq~~~I~N~~i~~~ntd-----------GIhi~~------s~ 235 (379)
....+.|++.+||++. ++..+.+.+++.+.|+||++.+.--+ ||++.. ++
T Consensus 104 gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~ 183 (772)
T 3gqn_A 104 GNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSE 183 (772)
T ss_dssp CCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCE
T ss_pred CceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccc
Confidence 4456788888999742 34457788899999999998876333 344333 55
Q ss_pred eEEEeccee
Q 041981 236 ETYIRNSFL 244 (379)
Q Consensus 236 ~v~I~ns~I 244 (379)
+|.|+||.|
T Consensus 184 NV~I~Nc~I 192 (772)
T 3gqn_A 184 NIWIENCEA 192 (772)
T ss_dssp EEEEESCEE
T ss_pred eEEEEeeEE
Confidence 666666665
No 58
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=90.86 E-value=1 Score=44.17 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=51.6
Q ss_pred ceeeeeeEEecCc------------------eeeeeeeeEEecccccceeEecceeccc--eEE-E-cCCccEEEEceee
Q 041981 291 ANTFSGVHCYNKA------------------TGFGGTGIYLKLPGNTQTRIVNSYMDYT--GIV-A-EDPVQLHISSSFF 348 (379)
Q Consensus 291 qn~i~~i~~~n~~------------------Tg~~G~GI~~~~~g~~~~~I~nCyldy~--~i~-~-~~~~~i~I~~~~~ 348 (379)
+..|++|+|.++. ....+.||.++ +.+...|+.|++... ++. + ..+.++.|++|.|
T Consensus 115 NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~--~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f 192 (346)
T 1pxz_A 115 HVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR--NVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHF 192 (346)
T ss_dssp EEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE--SCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEE
T ss_pred CEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe--cCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEE
Confidence 4556777777663 12456788776 467788888877543 553 3 5777899999999
Q ss_pred eecceeEeeecc-----ceeeeeEEEeeec
Q 041981 349 LGDAFIVLKSIN-----GVAKGVNIVDNLF 373 (379)
Q Consensus 349 ~g~~~v~l~~~~-----~~~~~~~i~~n~f 373 (379)
..-...+|=-.. ..-..+++.+|.|
T Consensus 193 ~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 193 FNHHKVMLLGHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp ESEEEEEEESCCSSCGGGGGCEEEEESCEE
T ss_pred ecCCceeEECCCCccccCCceEEEEEeeEE
Confidence 876555544221 1112566777777
No 59
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.33 E-value=0.13 Score=52.25 Aligned_cols=22 Identities=36% Similarity=0.431 Sum_probs=20.7
Q ss_pred cCccCCCCCchHHHHHHHHHHh
Q 041981 89 YGADPTGKSDSTEAILKALSDA 110 (379)
Q Consensus 89 yGA~gDG~tDdT~Aiq~Ai~~A 110 (379)
=||+|||++|||+|+.+|++++
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~ 25 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT 25 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS
T ss_pred CcccCCCccCcHHHHHHHhccC
Confidence 4899999999999999999997
No 60
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=87.97 E-value=5.7 Score=39.12 Aligned_cols=134 Identities=15% Similarity=0.104 Sum_probs=80.3
Q ss_pred CceeEe-eeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEE----cccceeeeeeEEe
Q 041981 227 NGILVQ-SGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMV----SGQANTFSGVHCY 300 (379)
Q Consensus 227 dGIhi~-~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v----~gqqn~i~~i~~~ 300 (379)
.||.+. ..++|-|+|-.|...- + .....+-+|.|.+.++ .|--|.|....++.+. +....||++.+|.
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~-----~-~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDIN-----P-KYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEEC-----T-TEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEE
T ss_pred ceEEEecCCCcEEEeCeEEEccc-----c-cccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEec
Confidence 567776 6788999998877631 1 1122345788888777 5666677766666653 2457788888887
Q ss_pred cCcee------ee-eeeeEE---ecccccceeEecceeccceEEEcCCc-----cEEEEceeeeecceeEeeeccceeee
Q 041981 301 NKATG------FG-GTGIYL---KLPGNTQTRIVNSYMDYTGIVAEDPV-----QLHISSSFFLGDAFIVLKSINGVAKG 365 (379)
Q Consensus 301 n~~Tg------~~-G~GI~~---~~~g~~~~~I~nCyldy~~i~~~~~~-----~i~I~~~~~~g~~~v~l~~~~~~~~~ 365 (379)
+.... .+ +.++.+ .++=++.|.+.+|. ...|. .+||-+|.|.+...-++..-.+ ..
T Consensus 198 ~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~-------~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~--~~ 268 (359)
T 1idk_A 198 GVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTS-------GRSPKVQDNTLLHAVNNYWYDISGHAFEIGEG--GY 268 (359)
T ss_dssp CBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBC-------SCTTEECTTCEEEEESCEEEEEEEEEEEECTT--CE
T ss_pred CCcccccccCccccceEEEEecCCCeEEEceEeecCc-------ccCccccCCceEEEECCEEecccceEEeccCC--cE
Confidence 65321 11 122211 01114556666552 23333 6999999999876544444322 35
Q ss_pred eEEEeeeccC
Q 041981 366 VNIVDNLFSG 375 (379)
Q Consensus 366 ~~i~~n~f~~ 375 (379)
+.+.+|.|.+
T Consensus 269 i~~e~N~F~~ 278 (359)
T 1idk_A 269 VLAEGNVFQN 278 (359)
T ss_dssp EEEESCEEEE
T ss_pred EEEEccEEEC
Confidence 7778888864
No 61
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=87.95 E-value=5.7 Score=39.71 Aligned_cols=43 Identities=7% Similarity=0.085 Sum_probs=23.5
Q ss_pred eEEEcCCccEEEEceeeeecce---eEeeec-cceeeeeEEEeeeccCC
Q 041981 332 GIVAEDPVQLHISSSFFLGDAF---IVLKSI-NGVAKGVNIVDNLFSGK 376 (379)
Q Consensus 332 ~i~~~~~~~i~I~~~~~~g~~~---v~l~~~-~~~~~~~~i~~n~f~~~ 376 (379)
++-+....++-+.+|.|..... -+++.- .+. .+.-.+|.|.|+
T Consensus 309 a~g~~~~~~i~~e~N~F~~~~~~~~~~~~~~s~~~--~~~~~gn~~~g~ 355 (399)
T 2o04_A 309 AWGIGKSSKIYAQNNVIDVPGLSAAKTISVFSGGT--ALYDSGTLLNGT 355 (399)
T ss_dssp SEEECTTCEEEEESCEEECTTCCSGGGEEECTTCC--BCEEESCEETTE
T ss_pred EeccCCCcEEEEEceEEECCCCCccceeeeccCCc--eEEEeCceecCc
Confidence 4444556688889999987521 112222 222 235666777653
No 62
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=87.49 E-value=2.7 Score=42.92 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=49.9
Q ss_pred cccceEEeeEEEEee-cCCc-eeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecCC--------cc-----EEE
Q 041981 210 NSLRTSIDNCYIARF-TSNG-ILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGN--------DN-----AVT 274 (379)
Q Consensus 210 nSq~~~I~N~~i~~~-ntdG-Ihi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn--------~~-----~vs 274 (379)
.|+.+.|+||+|..- +++| ++...+++|.|+||.+.. +.||.+.-+ .+ ++.
T Consensus 173 ~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g--------------g~GIrIktg~d~IG~~~~g~v~NI~~~ 238 (464)
T 1h80_A 173 WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEG--------------GIALRMETDNLLMKNYKQGGIRNIFAD 238 (464)
T ss_dssp EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEES--------------SEEEEEECCCHHHHHHTCCEEEEEEEE
T ss_pred eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEEC--------------CCEEEEEeCCceeccCCCCcEEEEEEE
Confidence 677888999998875 3446 677889999999998544 133333221 12 455
Q ss_pred EEEEEecceeEEEccc-----ceeeeeeEEecC
Q 041981 275 DVVIFSAAVGIMVSGQ-----ANTFSGVHCYNK 302 (379)
Q Consensus 275 D~~i~~g~~G~~v~gq-----qn~i~~i~~~n~ 302 (379)
|+.+.....++++... +-+++||+..+.
T Consensus 239 Ni~~~nv~~~I~I~p~~~~isnItfeNI~~t~~ 271 (464)
T 1h80_A 239 NIRCSKGLAAVMFGPHFMKNGDVQVTNVSSVSC 271 (464)
T ss_dssp EEEEESSSEEEEEECTTCBCCCEEEEEEEEESS
T ss_pred eEEEECCceeEEEeCCCceEeEEEEEEEEEEcc
Confidence 5556666677777643 344455555443
No 63
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=84.44 E-value=13 Score=36.61 Aligned_cols=139 Identities=17% Similarity=0.092 Sum_probs=79.7
Q ss_pred CceeEe-eeeeEEEecceeeeecccCCCCCccccceeeEEecCCcc-EEEEEEEEecceeEEE----cccceeeeeeEEe
Q 041981 227 NGILVQ-SGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMGNDN-AVTDVVIFSAAVGIMV----SGQANTFSGVHCY 300 (379)
Q Consensus 227 dGIhi~-~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g~~G~~v----~gqqn~i~~i~~~ 300 (379)
.||.|. ..++|-|+|-.|...-. .....+-+|.+.+.++ .|-.|.|....++.+. .....+|++-+|.
T Consensus 124 ~gl~i~~~a~NVIIrnl~i~~~~~------~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 124 KGLRVVSGAKNVIIQNIAVTDINP------KYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp CCEEEETTCCCEEEESCEEEEECT------TEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred ceEEEecCCCCEEEeCcEEEecCC------cccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 467776 66888888877765411 1123456788888777 6777778776677653 2346788888887
Q ss_pred cCce------eeeeeeeEEe----cccccceeEecceeccceEEEcCCccEEEEceeeeecceeEeeeccceeeeeEEEe
Q 041981 301 NKAT------GFGGTGIYLK----LPGNTQTRIVNSYMDYTGIVAEDPVQLHISSSFFLGDAFIVLKSINGVAKGVNIVD 370 (379)
Q Consensus 301 n~~T------g~~G~GI~~~----~~g~~~~~I~nCyldy~~i~~~~~~~i~I~~~~~~g~~~v~l~~~~~~~~~~~i~~ 370 (379)
+... +.+..+..+. +.=++.|.+.+|. =-.=++.....+|+-+|.|.....-++..-. -..+.+.+
T Consensus 198 ~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~--~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~--~~~i~~e~ 273 (359)
T 1qcx_A 198 GRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLS--GRMPKVQGNTLLHAVNNLFHNFDGHAFEIGT--GGYVLAEG 273 (359)
T ss_dssp CBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBC--SCTTEECSSEEEEEESCEEEEEEEEEEEECT--TEEEEEES
T ss_pred CCccccccCcccccceeEEecCCCCeehcccEeccCc--ccCceecCCceEEEEccEEECccCeEEecCC--CceEEEEe
Confidence 5421 1222121111 1114555555552 0011111223699999999986554444322 24578888
Q ss_pred eeccC
Q 041981 371 NLFSG 375 (379)
Q Consensus 371 n~f~~ 375 (379)
|.|..
T Consensus 274 N~F~~ 278 (359)
T 1qcx_A 274 NVFQD 278 (359)
T ss_dssp CEEEE
T ss_pred eEEEC
Confidence 88854
No 64
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=84.21 E-value=4.6 Score=39.71 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=52.2
Q ss_pred cceeeeeeEEecCce---------e--eeeeeeEEecccccceeEecceecc-------------------ceE--EEcC
Q 041981 290 QANTFSGVHCYNKAT---------G--FGGTGIYLKLPGNTQTRIVNSYMDY-------------------TGI--VAED 337 (379)
Q Consensus 290 qqn~i~~i~~~n~~T---------g--~~G~GI~~~~~g~~~~~I~nCyldy-------------------~~i--~~~~ 337 (379)
++..||||+|.+..- + -.+.+|.+. +.+..+|+.|.+.. .+. +..+
T Consensus 104 ~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~--~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~ 181 (355)
T 1pcl_A 104 KNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID--NSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKG 181 (355)
T ss_pred CeEEEeeeEEEcCcccccccccccCccccCceEEec--CCCcEEEEeeEEeccccCccccccccCccccccccceeeecC
Confidence 345677788875321 1 236677775 46888888897652 222 2335
Q ss_pred CccEEEEceeeeecceeEeeeccce-------eeeeEEEeeeccCC
Q 041981 338 PVQLHISSSFFLGDAFIVLKSINGV-------AKGVNIVDNLFSGK 376 (379)
Q Consensus 338 ~~~i~I~~~~~~g~~~v~l~~~~~~-------~~~~~i~~n~f~~~ 376 (379)
+.+|.|+.|.|.+-..+.|--..-. -..++|-+|.|.+.
T Consensus 182 s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 182 SDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred CCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC
Confidence 6789999999988776665433211 11477777777554
No 65
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=82.00 E-value=4.2 Score=39.50 Aligned_cols=85 Identities=11% Similarity=0.030 Sum_probs=53.7
Q ss_pred ceeeeeeEEecCceeeeeeeeEEecc---cccceeEecceecc-------------ceE-E-EcCCccEEEEceeeeecc
Q 041981 291 ANTFSGVHCYNKATGFGGTGIYLKLP---GNTQTRIVNSYMDY-------------TGI-V-AEDPVQLHISSSFFLGDA 352 (379)
Q Consensus 291 qn~i~~i~~~n~~Tg~~G~GI~~~~~---g~~~~~I~nCyldy-------------~~i-~-~~~~~~i~I~~~~~~g~~ 352 (379)
...|+||+|.++..+.++.+|.+... ..+..+|+-|.+.. .+. - ..++.+|.|+.|.|..-.
T Consensus 96 NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~ 175 (330)
T 2qy1_A 96 NVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQ 175 (330)
T ss_dssp EEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEE
T ss_pred eEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCC
Confidence 45667888887776667788887732 25778888886632 221 1 235678999999988766
Q ss_pred eeEeeeccc-----eeeeeEEEeeeccC
Q 041981 353 FIVLKSING-----VAKGVNIVDNLFSG 375 (379)
Q Consensus 353 ~v~l~~~~~-----~~~~~~i~~n~f~~ 375 (379)
.+.|---.- .-..+++-+|.|.+
T Consensus 176 k~~L~G~sd~~~~~~~~~vT~h~N~f~~ 203 (330)
T 2qy1_A 176 KVALNGYSDSDTKNSAARTTYHHNRFEN 203 (330)
T ss_dssp ECCEESSSTTCGGGGGCEEEEESCEEEE
T ss_pred eEEEECCCCccccCCCceEEEECcEEcC
Confidence 666543310 01356777777654
No 66
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=81.26 E-value=48 Score=33.39 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=36.4
Q ss_pred cccceeEEEEeccccc-------CCce-EEcccceEEeeEEEEeecCCceeEe-----------eeeeEEEecceeeeec
Q 041981 188 EYITLEDLMFDSNYRG-------GAIS-VINSLRTSIDNCYIARFTSNGILVQ-----------SGHETYIRNSFLGQHI 248 (379)
Q Consensus 188 ~~i~lrnl~~D~n~~~-------~gi~-~~nSq~~~I~N~~i~~~ntdGIhi~-----------~s~~v~I~ns~Ig~~~ 248 (379)
....++||+|-++.-. ..+. .+++.+..+.||.|.+. -|=+... ....-+.++|.|....
T Consensus 201 ~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~-QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtV 279 (422)
T 3grh_A 201 NGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGR-QNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDV 279 (422)
T ss_dssp TTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECS-TTCEEECCCCTTCSCCSSCCCEEEEESCEEEESE
T ss_pred CCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEee-cceeeeccccccccccccccccEEEEecEEeccc
Confidence 3556789999765431 1222 23455678899999986 2323221 2344588888887654
No 67
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=78.66 E-value=6.8 Score=38.49 Aligned_cols=90 Identities=9% Similarity=0.105 Sum_probs=56.3
Q ss_pred eEEEc-ccceeeeeeEEecCce-eeeeeeeEEecccccceeEecceeccc---------------eE-EE-cCCccEEEE
Q 041981 284 GIMVS-GQANTFSGVHCYNKAT-GFGGTGIYLKLPGNTQTRIVNSYMDYT---------------GI-VA-EDPVQLHIS 344 (379)
Q Consensus 284 G~~v~-gqqn~i~~i~~~n~~T-g~~G~GI~~~~~g~~~~~I~nCyldy~---------------~i-~~-~~~~~i~I~ 344 (379)
|+.+. .++..||+|+|..... ...+.+|.+. +.+..+|+-|.+... +. -+ .++.+|.|+
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~--~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTIS 181 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD--DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVS 181 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEE--SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEE
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEee--CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEE
Confidence 45553 3456788888875422 2356778776 468899999966421 11 12 466799999
Q ss_pred ceeeeecceeEeeecc-c-eeeeeEEEeeeccC
Q 041981 345 SSFFLGDAFIVLKSIN-G-VAKGVNIVDNLFSG 375 (379)
Q Consensus 345 ~~~~~g~~~v~l~~~~-~-~~~~~~i~~n~f~~ 375 (379)
.|.|.+.....|--.. . ....+.+-+|.|.+
T Consensus 182 nn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~ 214 (353)
T 1air_A 182 YNYIHGVKKVGLDGSSSSDTGRNITYHHNYYND 214 (353)
T ss_dssp SCEEEEEEECCEESSSTTCCCCEEEEESCEEEE
T ss_pred eeEEcCCCceeEECCCcCCCCceEEEEceEEcC
Confidence 9999977666554221 1 11457777777754
No 68
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=75.84 E-value=7.1 Score=39.05 Aligned_cols=49 Identities=12% Similarity=0.155 Sum_probs=31.3
Q ss_pred eeeeeEEecccccceeEecceecc-------------------ceE--EEcCCccEEEEceeeeecceeEee
Q 041981 307 GGTGIYLKLPGNTQTRIVNSYMDY-------------------TGI--VAEDPVQLHISSSFFLGDAFIVLK 357 (379)
Q Consensus 307 ~G~GI~~~~~g~~~~~I~nCyldy-------------------~~i--~~~~~~~i~I~~~~~~g~~~v~l~ 357 (379)
.+.+|.+. +.+..+|+-|.+.. .+. +..++.+|.|++|.|.+-....|-
T Consensus 182 ~~DaI~i~--~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~Li 251 (399)
T 2o04_A 182 QYDNITIN--GGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIF 251 (399)
T ss_dssp CCCSEEEE--SCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEE
T ss_pred CCCeEEec--CCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEe
Confidence 35667664 46788888886642 121 233566888888888876555543
No 69
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=75.74 E-value=8.2 Score=38.06 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=48.4
Q ss_pred ceeeeeeEEecCc---e------e--eeeeeeEEecccccceeEecceecc-------------------ceE--EEcCC
Q 041981 291 ANTFSGVHCYNKA---T------G--FGGTGIYLKLPGNTQTRIVNSYMDY-------------------TGI--VAEDP 338 (379)
Q Consensus 291 qn~i~~i~~~n~~---T------g--~~G~GI~~~~~g~~~~~I~nCyldy-------------------~~i--~~~~~ 338 (379)
+..||||+|.+.. . + -.+.+|.++. +.+..+|+-|.+.. .+. +..++
T Consensus 115 NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~-~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s 193 (361)
T 1pe9_A 115 NVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITN-GAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGS 193 (361)
T ss_dssp EEEEESCEEECCCCSSCEEETTTEEECCCCSEEEET-TCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTC
T ss_pred eEEEeCeEEEcCcccccccccccCcccCCceEEeec-CCceEEEEccEeecccccccccccccCcceeeccceeeeecCC
Confidence 4566777776532 1 1 2356777752 15788888886642 222 22356
Q ss_pred ccEEEEceeeeecceeEeeeccce-------eeeeEEEeeecc
Q 041981 339 VQLHISSSFFLGDAFIVLKSINGV-------AKGVNIVDNLFS 374 (379)
Q Consensus 339 ~~i~I~~~~~~g~~~v~l~~~~~~-------~~~~~i~~n~f~ 374 (379)
-+|.|+.|.|.+.....|--..-. -..+++-+|.|.
T Consensus 194 ~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~ 236 (361)
T 1pe9_A 194 DYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFN 236 (361)
T ss_dssp EEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEE
T ss_pred CcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEc
Confidence 789999999987766655433211 013666666664
No 70
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=72.47 E-value=63 Score=31.06 Aligned_cols=55 Identities=11% Similarity=0.045 Sum_probs=35.1
Q ss_pred ceeeEEecCCccEEEEEEEEecceeEEEcccceeeeeeEEecCceeeeeeeeEEe
Q 041981 260 TGTAINLMGNDNAVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGFGGTGIYLK 314 (379)
Q Consensus 260 ~gtGI~i~gn~~~vsD~~i~~g~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~ 314 (379)
.+.+|.+.+..-.+-+|.|.+..+++.+......++++.+....--+.|+|-.+|
T Consensus 113 qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~a~f 167 (319)
T 1gq8_A 113 QAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVL 167 (319)
T ss_dssp CCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEESSSCEEESCEEEE
T ss_pred ceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEeeeeEEecCCcEEE
Confidence 4467776543338888888888888888643335666666555444556655443
No 71
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=68.29 E-value=39 Score=33.88 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=64.4
Q ss_pred CceeEeeeeeEEEecceeeeeccc-------CCCCCccccceeeEEecCCcc-EEEEEEEEec-----------------
Q 041981 227 NGILVQSGHETYIRNSFLGQHITA-------GGDPGERNFTGTAINLMGNDN-AVTDVVIFSA----------------- 281 (379)
Q Consensus 227 dGIhi~~s~~v~I~ns~Ig~~~~~-------ggd~~~~~~~gtGI~i~gn~~-~vsD~~i~~g----------------- 281 (379)
-||++...++|-|+|-.|.....+ .+..+.++.++-+|.|.+..+ .|--|.|..+
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 456666667788888777653211 111233445667888888887 5555667643
Q ss_pred ceeEE-E--cccceeeeeeEEecCceeeeeeeeEEecc-------cccceeEecceeccceEEEcCC----ccEEEEcee
Q 041981 282 AVGIM-V--SGQANTFSGVHCYNKATGFGGTGIYLKLP-------GNTQTRIVNSYMDYTGIVAEDP----VQLHISSSF 347 (379)
Q Consensus 282 ~~G~~-v--~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~-------g~~~~~I~nCyldy~~i~~~~~----~~i~I~~~~ 347 (379)
.+|.+ + .....||++.+|.++. .+..+=.- |..+..+.+||. ..+....| .++|+-+|.
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~-----k~~LiG~sd~~~~d~g~~~VT~hhN~f--~~~~~R~Pr~R~G~~Hv~NN~ 300 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHD-----KVTLIGASDSRMADSGHLRVTLHHNYY--KNVTQRLPRVRFGQVHIYNNY 300 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEE-----ECCEECSCTTCGGGTTCCCEEEESCEE--EEEEECSSEESSCEEEEESCE
T ss_pred cccceeeecCCCcEEEEeeEEcCCC-----ceeEeCCCCCCcccCCceEEEEECcEe--cCCccCCcccccceEEEEcce
Confidence 25533 2 3446677777777653 22222110 111344445543 23333333 379999999
Q ss_pred eeec
Q 041981 348 FLGD 351 (379)
Q Consensus 348 ~~g~ 351 (379)
|.+.
T Consensus 301 ~~n~ 304 (416)
T 1vbl_A 301 YEFS 304 (416)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9753
No 72
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=66.97 E-value=40 Score=32.41 Aligned_cols=55 Identities=7% Similarity=-0.002 Sum_probs=32.2
Q ss_pred ceeeEEecCCccEEEEEEEEecceeEEEcccceeeeeeEEecCceeeeeeeeEEe
Q 041981 260 TGTAINLMGNDNAVTDVVIFSAAVGIMVSGQANTFSGVHCYNKATGFGGTGIYLK 314 (379)
Q Consensus 260 ~gtGI~i~gn~~~vsD~~i~~g~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~ 314 (379)
.+.+|.+.+..-.+-+|.|.+..+.+.+......++++.+....--+.|+|-.+|
T Consensus 109 qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~avf 163 (317)
T 1xg2_A 109 QAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVF 163 (317)
T ss_dssp CCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEESSSCEEECCEEEE
T ss_pred ceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEeceeEEcCCceEEE
Confidence 3456666543337777888887787777543235566666544444555555443
No 73
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=66.46 E-value=97 Score=29.94 Aligned_cols=131 Identities=18% Similarity=0.232 Sum_probs=70.3
Q ss_pred CceeEeeeeeEEEecceeeeecccCCCCCccccceeeEEecC-Ccc-EEEEEEEEec---------ceeEE-E--cccce
Q 041981 227 NGILVQSGHETYIRNSFLGQHITAGGDPGERNFTGTAINLMG-NDN-AVTDVVIFSA---------AVGIM-V--SGQAN 292 (379)
Q Consensus 227 dGIhi~~s~~v~I~ns~Ig~~~~~ggd~~~~~~~gtGI~i~g-n~~-~vsD~~i~~g---------~~G~~-v--~gqqn 292 (379)
.||.+..+++|-|+|-.|.... ...+-+|.|.+ ..+ .|--|.|..+ .+|.+ + +....
T Consensus 95 ~gl~i~~a~NVIIrNl~i~~~~---------~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~V 165 (326)
T 3vmv_A 95 IGIRLSNAHNIIIQNVSIHHVR---------EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYI 165 (326)
T ss_dssp CCEEEESEEEEEEESCEEECCC---------STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEE
T ss_pred cEEEEEecceEEEECeEEEcCC---------CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceE
Confidence 4666666788888887776532 12456677776 556 5555667532 25543 2 23356
Q ss_pred eeeeeEEecCceeeeeeeeEEeccc-----ccceeEecceeccceEEEcCC----ccEEEEceeeeecceeEeeecccee
Q 041981 293 TFSGVHCYNKATGFGGTGIYLKLPG-----NTQTRIVNSYMDYTGIVAEDP----VQLHISSSFFLGDAFIVLKSINGVA 363 (379)
Q Consensus 293 ~i~~i~~~n~~Tg~~G~GI~~~~~g-----~~~~~I~nCyldy~~i~~~~~----~~i~I~~~~~~g~~~v~l~~~~~~~ 363 (379)
||++.+|.+ ++.+..+=.-. -.+.-+..+|. .......| .++|+-+|.|.+...-++..-.+
T Consensus 166 TISnn~f~~-----h~k~~LiG~sd~~~~~~~~vT~~~N~f--~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~-- 236 (326)
T 3vmv_A 166 TVSWNKFEN-----HWKTMLVGHTDNASLAPDKITYHHNYF--NNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVG-- 236 (326)
T ss_dssp EEESCEEEE-----EEECEEECSSSCGGGCCEEEEEESCEE--EEEEECTTEEESCEEEEESCEEEEESSCSEEEETT--
T ss_pred EEEceEEec-----CceEEEECCCCCCcccCccEEEEeeEe--cCCcCcCCcccCCcEEEEccEEECCCceEEeecCC--
Confidence 666666654 44443332110 01233444433 22233333 37999999999875444443322
Q ss_pred eeeEEEeeeccC
Q 041981 364 KGVNIVDNLFSG 375 (379)
Q Consensus 364 ~~~~i~~n~f~~ 375 (379)
.-+.+.+|.|..
T Consensus 237 a~v~~e~N~F~~ 248 (326)
T 3vmv_A 237 ARVFVENNYFDN 248 (326)
T ss_dssp CEEEEESCEEEE
T ss_pred cEEEEEceEEEC
Confidence 245666666653
No 74
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=50.78 E-value=34 Score=34.15 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=48.3
Q ss_pred EEEEEEEEec-ceeEEEcccceeeeeeEEecCceeeeeeeeEEeccc--ccceeEecc-eeccceEEEcCCccEEEEc-e
Q 041981 272 AVTDVVIFSA-AVGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNS-YMDYTGIVAEDPVQLHISS-S 346 (379)
Q Consensus 272 ~vsD~~i~~g-~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nC-yldy~~i~~~~~~~i~I~~-~ 346 (379)
-|-++.+.+. ..|+-.-+|.-.++||...+| -|.|.++.-.+ +++..|.+| |++| ++-||.|++ |
T Consensus 320 liDnllv~gsLGVG~GMDG~G~YVSNitv~DC----AGsG~~~~t~~~~FtNi~vID~N~~nF------~adQi~I~G~C 389 (559)
T 2vfm_A 320 LIDNLLVRGALGVGFGMDGKGMYVSNITVEDC----AGSGAYLLTHESVFTNIAIIDTNTKDF------QANQIYISGAC 389 (559)
T ss_dssp EEEEEEEECCSSEEEEEEEESCEEEEEEEESC----SSEEEEEEEESCEEEEEEEESCCTTCC------SSCSEEECSSC
T ss_pred hhhhheeecccceeeeecCCCceEeeeEehhc----cCcceEEeeccceeeeeEEEecccccC------CcceEEEEcce
Confidence 4444444432 244444566677888888888 56777766555 677777777 4445 456777777 6
Q ss_pred eeeecceeEeeec
Q 041981 347 FFLGDAFIVLKSI 359 (379)
Q Consensus 347 ~~~g~~~v~l~~~ 359 (379)
-..|-+-+-+|+.
T Consensus 390 ~VNGlR~~GIk~~ 402 (559)
T 2vfm_A 390 RVNGLRLIGIRST 402 (559)
T ss_dssp EEEEEEECCSCCC
T ss_pred EEcceEEeeeccC
Confidence 6666655545444
No 75
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=49.06 E-value=34 Score=34.11 Aligned_cols=78 Identities=18% Similarity=0.346 Sum_probs=48.6
Q ss_pred EEEEEEEEec-ceeEEEcccceeeeeeEEecCceeeeeeeeEEeccc--ccceeEecc-eeccceEEEcCCccEEEEc-e
Q 041981 272 AVTDVVIFSA-AVGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNS-YMDYTGIVAEDPVQLHISS-S 346 (379)
Q Consensus 272 ~vsD~~i~~g-~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nC-yldy~~i~~~~~~~i~I~~-~ 346 (379)
-|-++.+.+. ..|+-.-+|.-.++||...+| -|.|.++...+ +++..|.|| |++| ++-||.|++ |
T Consensus 323 liDnllv~gsLGVG~GMDG~G~YVSNitv~DC----AGsG~~~~t~~~~FtNi~vID~N~~nF------~adQi~I~G~C 392 (559)
T 2v5i_A 323 LVDNILVMNSLGVGLGMDGSGGYVSNVTVQDC----AGAGMLAHTYNRVFSNITVIDCNYLNF------DSDQIIIIGDC 392 (559)
T ss_dssp EEEEEEEESCSSEEEEEEEESCEEEEEEEESC----SSEEEEEEEESCEEEEEEEESCCTTCC------SSCSEEECSSC
T ss_pred hhhhheeecccceeeeecCCCceEeeeEehhc----cCcceEEeeccceeeeeEEEecccccC------CcceEEEEcce
Confidence 4444444432 244444566678888999888 56777766555 677777777 4455 456888877 6
Q ss_pred eeeecceeEeeec
Q 041981 347 FFLGDAFIVLKSI 359 (379)
Q Consensus 347 ~~~g~~~v~l~~~ 359 (379)
-..|-+-+-+|+.
T Consensus 393 ~VNGlR~~GIk~~ 405 (559)
T 2v5i_A 393 IVNGIRAAGIKPQ 405 (559)
T ss_dssp EEEEEECCCSSCC
T ss_pred EEcceEEeeeccC
Confidence 6666655544444
No 76
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=43.96 E-value=46 Score=35.06 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=20.3
Q ss_pred EeeEEEEee-cCCceeE---eeeeeEEEecce
Q 041981 216 IDNCYIARF-TSNGILV---QSGHETYIRNSF 243 (379)
Q Consensus 216 I~N~~i~~~-ntdGIhi---~~s~~v~I~ns~ 243 (379)
|+++++.+. .--.||+ ..++++.|+++.
T Consensus 187 I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvt 218 (600)
T 2x6w_A 187 VTGITFQNGDVTWAITLGWNGYGSNCYVRKCR 218 (600)
T ss_dssp EESCEEESCCCSCSEEECBTTBEEEEEEESCE
T ss_pred EeCeEEECCCCccEEEeCCCCCcccEEEeCeE
Confidence 455555554 4456788 789999999998
No 77
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=42.18 E-value=51 Score=34.10 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=46.1
Q ss_pred EEEEEEEEec-ceeEEEcccceeeeeeEEecCceeeeeeeeEEeccc--ccceeEecc-eeccceEEEcCCccEEEEc-e
Q 041981 272 AVTDVVIFSA-AVGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNS-YMDYTGIVAEDPVQLHISS-S 346 (379)
Q Consensus 272 ~vsD~~i~~g-~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nC-yldy~~i~~~~~~~i~I~~-~ 346 (379)
.|-++.+.+. ..|+-.-+|--.++||...+| -|.|.++...+ +++..|.|| |++| ++-||.|++ |
T Consensus 427 lidn~~v~~slgvg~gmdg~g~yvsnitv~dc----ag~g~~~~~~~~~ftni~vid~n~~~f------~~~qi~i~g~c 496 (666)
T 2xc1_A 427 LIDNLLVRGALGVGFGMDGKGMYVSNITVEDC----AGSGAYLLTHESVFTNIAIIDTNTKDF------QANQIYISGAC 496 (666)
T ss_dssp EEEEEEEESCSSEEEEEEEESCEEEEEEEESC----SSEEEEEEEESCEEEEEEEESCCTTCC------SSCSEEECSSC
T ss_pred hhhhheeecccceeeeecCCCceEeeeEehhc----cCcceEEeeccceeeeeEEEecccccC------CcceEEEEcce
Confidence 3444444332 244444566677888888888 56777765555 677777777 4445 345777776 6
Q ss_pred eeeecceeEeeec
Q 041981 347 FFLGDAFIVLKSI 359 (379)
Q Consensus 347 ~~~g~~~v~l~~~ 359 (379)
-..|-+-+-+|+.
T Consensus 497 ~vng~r~~gi~~~ 509 (666)
T 2xc1_A 497 RVNGLRLIGIRST 509 (666)
T ss_dssp EEEEEEECCSSCC
T ss_pred EEcceEEeeeccC
Confidence 6665544444443
No 78
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=37.91 E-value=63 Score=28.22 Aligned_cols=49 Identities=4% Similarity=0.042 Sum_probs=22.8
Q ss_pred EEEEEEEEecc-eeEEEcccceeeeeeEEecCceeeeeeeeEEecccccceeEecc
Q 041981 272 AVTDVVIFSAA-VGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNS 326 (379)
Q Consensus 272 ~vsD~~i~~g~-~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nC 326 (379)
.+.++.|.++. .|....+ -.++++.|.+|. -.+.++..+.+.+..+.+|
T Consensus 91 ~l~~~~f~~~~l~~a~f~~--a~l~~~~f~~~~----l~~a~f~~a~l~~~~f~~~ 140 (214)
T 2w7z_A 91 SFHRVTFLRCNLTGTNFAD--SYLXDCLFEDCX----ADYASFRFANFNLVHFNQT 140 (214)
T ss_dssp EEEEEEEESCBCTTCBCTT--CEEEEEEEESCB----CTTCBCTTCEEEEEEEESC
T ss_pred EEEeeEEeCCeeeCCCcCC--CEeeeeEEeCCC----CCCCcCCcCccCceEEEec
Confidence 45555555543 3344433 345566666552 2223333333444555555
No 79
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=23.97 E-value=5.1e+02 Score=25.26 Aligned_cols=28 Identities=21% Similarity=0.094 Sum_probs=13.4
Q ss_pred EEeeEEEEeecCCceeEeeeeeEEEecce
Q 041981 215 SIDNCYIARFTSNGILVQSGHETYIRNSF 243 (379)
Q Consensus 215 ~I~N~~i~~~ntdGIhi~~s~~v~I~ns~ 243 (379)
.|.|+.|-....||||... ..-.|+|-+
T Consensus 161 tlkNvIiG~~~~dGIHC~~-G~CtleNVw 188 (344)
T 3b4n_A 161 VKNLRISASGGADGIHCDS-GNCTIENVI 188 (344)
T ss_dssp EEEEEECTTCCTTCEEEEE-SEEEEEEEE
T ss_pred EEEEEEecCCCccceEEcc-CCeeEEEEe
Confidence 3455555333456777652 123444444
No 80
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=23.33 E-value=1.5e+02 Score=25.65 Aligned_cols=51 Identities=10% Similarity=-0.025 Sum_probs=26.1
Q ss_pred EEEEEEEEecc-eeEEEcccceeeeeeEEecCceeeeeeeeEEecccccceeEeccee
Q 041981 272 AVTDVVIFSAA-VGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPGNTQTRIVNSYM 328 (379)
Q Consensus 272 ~vsD~~i~~g~-~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g~~~~~I~nCyl 328 (379)
.+.++.|.++. .+..+.+ -.++++.|.+|. -.|.++..+.+.+..+.+|.|
T Consensus 71 ~l~~~~f~~~~l~~~~f~~--a~l~~~~f~~~~----l~~a~f~~a~l~~~~f~~~~l 122 (214)
T 2w7z_A 71 DCSNVRFEACDFSNVEWLS--GSFHRVTFLRCN----LTGTNFADSYLXDCLFEDCXA 122 (214)
T ss_dssp EEEEEEEESCBCTTCBCTT--CEEEEEEEESCB----CTTCBCTTCEEEEEEEESCBC
T ss_pred EecCCEEEeeECcCCCccC--CEEEeeEEeCCe----eeCCCcCCCEeeeeEEeCCCC
Confidence 55566665543 3333433 445566666662 233344444455666666644
No 81
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=21.16 E-value=2.2e+02 Score=28.94 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=26.9
Q ss_pred EEEEEEEEec-ceeEEEcccceeeeeeEEecCceeeeeeeeEEeccc--ccceeEecc
Q 041981 272 AVTDVVIFSA-AVGIMVSGQANTFSGVHCYNKATGFGGTGIYLKLPG--NTQTRIVNS 326 (379)
Q Consensus 272 ~vsD~~i~~g-~~G~~v~gqqn~i~~i~~~n~~Tg~~G~GI~~~~~g--~~~~~I~nC 326 (379)
-|.++.+.+. .+|++.-+|-+.++||..+.| .|.|+++..-+ +++..+.+|
T Consensus 311 ii~Ni~~~~~lGVG~~~DG~~~~v~ni~~~dc----ag~G~~~~~~~~~ftNitvI~~ 364 (543)
T 3riq_A 311 IIRNIITRDCMGIGAWWDGQKNIIDNVVTYEA----HKEGMFDRGTNNDITNITVVCA 364 (543)
T ss_dssp EEEEEEEESCSSCSSEECSSSCEEEEEEEESC----SSCSEEECSSSCEEEEEEEESC
T ss_pred hhhhhheeccceeeeeecCCCCeEeeEEeecc----ccCcceeeccCcceeeEEEEec
Confidence 4444444443 355666666666666666666 45565555333 344444444
No 82
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=20.49 E-value=2.8e+02 Score=27.11 Aligned_cols=7 Identities=43% Similarity=0.652 Sum_probs=3.3
Q ss_pred eeEecce
Q 041981 321 TRIVNSY 327 (379)
Q Consensus 321 ~~I~nCy 327 (379)
..|.+||
T Consensus 199 g~I~nC~ 205 (363)
T 3n6z_A 199 SYIKNCY 205 (363)
T ss_dssp CEEEEEE
T ss_pred eEEEeEE
Confidence 3455554
Done!