Query 041984
Match_columns 98
No_of_seqs 106 out of 605
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 22:09:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041984.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041984hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 1.4E-12 4.9E-17 78.3 8.1 65 22-90 2-67 (68)
2 1cc8_A Protein (metallochapero 99.4 8.5E-12 2.9E-16 75.1 9.4 67 21-90 4-72 (73)
3 2crl_A Copper chaperone for su 99.2 1.1E-10 3.7E-15 75.6 9.7 72 20-94 17-89 (98)
4 4a4j_A Pacszia, cation-transpo 99.1 8.3E-10 2.8E-14 65.1 8.6 64 22-88 2-69 (69)
5 3dxs_X Copper-transporting ATP 98.9 7E-09 2.4E-13 61.9 8.5 68 22-90 2-72 (74)
6 3fry_A Probable copper-exporti 98.9 4.2E-09 1.4E-13 63.5 7.1 64 21-89 4-69 (73)
7 2roe_A Heavy metal binding pro 98.8 1.1E-08 3.9E-13 59.3 6.0 60 25-87 3-64 (66)
8 2xmw_A PACS-N, cation-transpor 98.8 6.3E-08 2.2E-12 55.7 9.1 65 20-86 1-68 (71)
9 2xmm_A SSR2857 protein, ATX1; 98.8 1.6E-08 5.6E-13 57.2 5.5 57 24-83 3-60 (64)
10 1qup_A Superoxide dismutase 1 98.7 4.1E-08 1.4E-12 72.8 8.7 69 22-93 6-75 (222)
11 2l3m_A Copper-ION-binding prot 98.7 1.6E-07 5.3E-12 54.3 8.3 60 22-83 5-67 (71)
12 1jk9_B CCS, copper chaperone f 98.6 1.6E-07 5.4E-12 70.9 8.9 69 22-93 7-76 (249)
13 3cjk_B Copper-transporting ATP 98.6 8.2E-07 2.8E-11 52.0 9.3 67 22-90 2-72 (75)
14 1fvq_A Copper-transporting ATP 98.6 5.9E-07 2E-11 51.8 8.4 65 23-89 3-70 (72)
15 1osd_A MERP, hypothetical prot 98.6 4.1E-07 1.4E-11 52.5 7.5 64 22-87 3-70 (72)
16 2qif_A Copper chaperone COPZ; 98.5 7.3E-07 2.5E-11 50.1 8.2 60 22-83 2-64 (69)
17 1aw0_A Menkes copper-transport 98.5 5.6E-07 1.9E-11 51.9 7.4 63 22-86 3-69 (72)
18 2k2p_A Uncharacterized protein 98.5 1.5E-07 5.2E-12 59.0 5.2 59 22-83 22-81 (85)
19 2aj0_A Probable cadmium-transp 98.5 5.4E-07 1.9E-11 52.7 6.9 49 20-70 1-50 (71)
20 2g9o_A Copper-transporting ATP 98.5 7.7E-07 2.6E-11 55.6 7.5 69 22-91 3-77 (90)
21 1q8l_A Copper-transporting ATP 98.4 1E-06 3.5E-11 53.6 7.6 67 21-89 8-78 (84)
22 1mwy_A ZNTA; open-faced beta-s 98.4 1.8E-06 6E-11 50.6 8.1 60 22-83 3-63 (73)
23 1opz_A Potential copper-transp 98.4 1.5E-06 5E-11 50.3 7.4 61 21-83 5-68 (76)
24 1p6t_A Potential copper-transp 98.4 8.4E-07 2.9E-11 58.7 6.9 70 22-93 74-147 (151)
25 1y3j_A Copper-transporting ATP 98.4 2E-06 6.9E-11 50.8 7.9 66 22-89 3-72 (77)
26 1cpz_A Protein (COPZ); copper 98.4 1.3E-06 4.6E-11 49.6 6.9 61 25-87 3-67 (68)
27 1kvi_A Copper-transporting ATP 98.4 1.3E-06 4.5E-11 51.7 6.9 70 16-88 3-76 (79)
28 1yjr_A Copper-transporting ATP 98.4 1.4E-06 4.9E-11 50.5 6.5 64 22-87 4-71 (75)
29 1yg0_A COP associated protein; 98.4 1.5E-06 5.3E-11 49.1 6.4 56 24-80 3-60 (66)
30 2ldi_A Zinc-transporting ATPas 98.3 3.7E-06 1.3E-10 47.7 7.7 60 22-83 3-65 (71)
31 2kyz_A Heavy metal binding pro 98.3 7.2E-07 2.5E-11 51.8 4.3 55 24-83 3-58 (67)
32 2kt2_A Mercuric reductase; nme 98.2 3.2E-06 1.1E-10 48.5 5.7 59 26-86 4-65 (69)
33 1jww_A Potential copper-transp 98.2 7.7E-06 2.6E-10 48.0 7.4 66 22-89 3-72 (80)
34 2ofg_X Zinc-transporting ATPas 98.2 7.9E-06 2.7E-10 53.0 8.0 61 21-83 7-70 (111)
35 2ew9_A Copper-transporting ATP 98.2 4E-06 1.4E-10 55.0 6.3 64 22-87 80-147 (149)
36 2kkh_A Putative heavy metal tr 98.1 2.1E-05 7E-10 48.9 7.9 69 22-92 16-88 (95)
37 2rop_A Copper-transporting ATP 98.1 1.5E-05 5.3E-10 55.9 7.9 67 22-90 122-192 (202)
38 2ew9_A Copper-transporting ATP 97.9 3.5E-05 1.2E-09 50.3 7.3 66 21-88 3-72 (149)
39 2rop_A Copper-transporting ATP 97.7 0.00013 4.3E-09 51.1 7.6 59 22-81 20-81 (202)
40 1p6t_A Potential copper-transp 97.5 0.00043 1.5E-08 45.4 7.4 58 22-80 6-66 (151)
41 3j09_A COPA, copper-exporting 97.0 0.0016 5.4E-08 54.8 7.6 59 23-83 3-64 (723)
42 3bpd_A Uncharacterized protein 88.3 0.65 2.2E-05 31.0 4.2 62 22-83 7-74 (100)
43 2x3d_A SSO6206; unknown functi 86.7 0.98 3.4E-05 29.9 4.3 61 22-83 5-73 (96)
44 2raq_A Conserved protein MTH88 86.3 0.94 3.2E-05 30.0 4.1 62 22-83 7-74 (97)
45 2jsx_A Protein NAPD; TAT, proo 74.8 11 0.00038 24.0 6.2 46 33-79 16-61 (95)
46 2jsx_A Protein NAPD; TAT, proo 74.1 6.9 0.00023 25.1 5.0 35 22-56 42-76 (95)
47 2cpq_A FragIle X mental retard 61.2 24 0.00081 22.6 5.5 40 36-78 33-72 (91)
48 2e2z_A TIM15; protein import, 52.0 5.5 0.00019 26.4 1.3 29 5-37 9-46 (100)
49 2k1h_A Uncharacterized protein 52.0 31 0.0011 22.1 4.9 41 37-80 39-80 (94)
50 2ko1_A CTR148A, GTP pyrophosph 51.3 33 0.0011 19.7 4.8 33 22-54 45-77 (88)
51 3cq1_A Putative uncharacterize 40.6 31 0.0011 21.5 3.6 34 23-56 42-81 (103)
52 2yy3_A Elongation factor 1-bet 40.1 45 0.0015 21.3 4.2 44 13-56 42-87 (91)
53 3lno_A Putative uncharacterize 39.6 20 0.00067 22.8 2.5 35 22-56 44-85 (108)
54 2qip_A Protein of unknown func 39.1 26 0.00089 23.5 3.2 30 61-91 112-142 (165)
55 1pqx_A Conserved hypothetical 36.1 30 0.001 22.0 2.9 41 37-80 39-80 (91)
56 1uwd_A Hypothetical protein TM 33.5 47 0.0016 20.6 3.5 35 23-57 43-83 (103)
57 3ami_A Zinc peptidase; alpha/b 30.2 33 0.0011 25.5 2.7 23 60-83 190-212 (445)
58 3g74_A Protein of unknown func 28.3 44 0.0015 21.4 2.8 25 69-93 60-84 (100)
59 2z30_B TK-subtilisin; thermoco 25.4 97 0.0033 17.7 3.7 25 27-56 36-60 (65)
60 3amj_B Zinc peptidase inactive 24.6 60 0.0021 23.6 3.2 23 60-83 190-212 (424)
61 1gh8_A Translation elongation 24.4 1.1E+02 0.0039 19.2 4.1 42 15-56 42-84 (89)
62 3hrg_A Uncharacterized protein 24.0 99 0.0034 22.5 4.3 38 53-91 208-245 (257)
63 3eoq_A Putative zinc protease; 23.6 48 0.0016 24.3 2.5 23 60-83 183-205 (406)
64 1vbk_A Hypothetical protein PH 23.4 2E+02 0.007 21.2 6.0 43 35-83 26-70 (307)
65 3go9_A Insulinase family prote 22.7 49 0.0017 25.6 2.5 22 61-83 213-234 (492)
66 3cnq_P Subtilisin BPN'; unclea 22.3 73 0.0025 18.5 2.8 19 38-56 53-71 (80)
67 2kgs_A Uncharacterized protein 22.2 1.4E+02 0.0049 19.4 4.5 31 37-72 67-97 (132)
68 2e9h_A EIF-5, eukaryotic trans 22.2 94 0.0032 21.7 3.7 28 52-81 72-99 (157)
69 2g2k_A EIF-5, eukaryotic trans 22.1 75 0.0026 22.5 3.2 28 52-81 65-92 (170)
70 1hr6_B Beta-MPP, mitochondrial 21.5 56 0.0019 24.0 2.5 22 61-83 190-211 (443)
71 3pro_C Alpha-lytic protease; P 21.5 44 0.0015 23.4 1.9 37 45-83 112-148 (166)
72 3v2d_I 50S ribosomal protein L 20.0 69 0.0024 21.9 2.6 45 36-83 62-106 (148)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.40 E-value=1.4e-12 Score=78.29 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=60.1
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEEc
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLTV 90 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivsv 90 (98)
++..|+|+|+|.+|..++.+++.+++|| ++.+|... ++++|.|+ +++..|.+.+++ .| .+++|++
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~-~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPN-KKVCIESE-HSMDTLLATLKK-TGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTT-TEEEEEES-SCHHHHHHHHHT-TCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCC-CEEEEEec-CCHHHHHHHHHH-cCCceEecCC
Confidence 5788899999999999999999999999 99999976 69999997 999999999998 66 8999886
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.35 E-value=8.5e-12 Score=75.12 Aligned_cols=67 Identities=6% Similarity=0.050 Sum_probs=60.8
Q ss_pred ceeEEEEEeecchhhHHHHHHHhcCCC-ceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEEc
Q 041984 21 NGKVVIKLSLEGHKSRSKALKIAVRVS-GVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLTV 90 (98)
Q Consensus 21 ~qkvVlKV~m~ce~C~~Kv~k~i~~~~-GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivsv 90 (98)
++++.|+|+|+|.+|..++.+++.+++ ||.++.+|... ++++|.+. +++..+.+.+++ .| .+++|.+
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~-~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~~~~ 72 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEK-QLVDVYTT-LPYDFILEKIKK-TGKEVRSGKQ 72 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTT-TEEEEEES-SCHHHHHHHHHT-TSSCEEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCC-CEEEEEEe-CCHHHHHHHHHH-hCCCceeeec
Confidence 478899999999999999999999999 99999999976 69999997 999999999998 56 7887764
No 3
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=75.58 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=64.3
Q ss_pred cceeEEEEEeecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEEccCCC
Q 041984 20 LNGKVVIKLSLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLTVINLK 94 (98)
Q Consensus 20 m~qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivsv~p~k 94 (98)
..+++.|+|+|+|..|..++.+++.+++||.++.+|... ++++|.++ +++..|.+.|++ .| .++++..++..
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~-~~~~V~~~-~~~~~i~~~i~~-~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLED-QMVLVHTT-LPSQEVQALLEG-TGRQAVLKGMGSGQ 89 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTT-TEEEEEES-SCHHHHHHHHHT-TTSCEEEEESCCCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCC-CEEEEEEe-CCHHHHHHHHHH-hCCceEEccCCCCc
Confidence 457889999999999999999999999999999999976 69999997 999999999998 56 78988876543
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.09 E-value=8.3e-10 Score=65.12 Aligned_cols=64 Identities=22% Similarity=0.338 Sum_probs=56.7
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEE--ecccCHHHHHHHHHhcCC-ceEEE
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVT--GDGMDPVLLTSLLRKTMR-FAELL 88 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~--G~~vDp~~lv~kLrKk~~-~aeiv 88 (98)
|++.|+|+ |+|.+|..++.+.+.+++||.++.+|... ++++|. +. +++..+.+.+++ .| .++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~-~~~~~i~~~i~~-~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFAL-EQAVVSYHGE-TTPQILTDAVER-AGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTT-CCHHHHHHHHHH-TTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCC-CCHHHHHHHHHH-cCCceEeC
Confidence 67889995 99999999999999999999999999976 699999 65 999999999998 56 66653
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=98.94 E-value=7e-09 Score=61.94 Aligned_cols=68 Identities=13% Similarity=0.075 Sum_probs=58.6
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCCceEEEEc
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMRFAELLTV 90 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~~aeivsv 90 (98)
+++.|+| .|+|.+|..++.+++.+++||.++.+|... ++++|..+ .+++..+.+.|++..-.+++++-
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQ-NRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGG-TEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 6788999 599999999999999999999999999976 69999764 27999999999984337888763
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.92 E-value=4.2e-09 Score=63.53 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=57.0
Q ss_pred ceeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEE
Q 041984 21 NGKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLT 89 (98)
Q Consensus 21 ~qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivs 89 (98)
++++.|+|+ |+|..|..++.+.+.+ +||.++.+|... ++++|.++ ++..|.+.|++ .| .+++++
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~-~~~~v~~~--~~~~i~~~i~~-~Gy~~~~~~ 69 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNE-AVVAGNKE--DVDKYIKAVEA-AGYQAKLRS 69 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSE-EEEEEEGG--GHHHHHHHHHH-TTCEEEECC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccC-CEEEEEEC--CHHHHHHHHHH-cCCceEecC
Confidence 378889995 9999999999999999 999999999976 69999997 99999999998 66 677665
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.81 E-value=1.1e-08 Score=59.34 Aligned_cols=60 Identities=23% Similarity=0.294 Sum_probs=52.0
Q ss_pred EEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEE
Q 041984 25 VIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAEL 87 (98)
Q Consensus 25 VlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aei 87 (98)
.|++. |+|..|..++.+.+.+++||.++.+|... ++++|.+. +++..+.+.+++ .| .+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEK-GEALVEGT-ADPKALVQAVEE-EGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSS-CBEEECSC-CCHHHHHHHHHT-TTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCC-CEEEECCC-CCHHHHHHHHHH-cCCCcEe
Confidence 46674 99999999999999999999999999976 69999776 899999999998 56 4543
No 8
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.81 E-value=6.3e-08 Score=55.74 Aligned_cols=65 Identities=20% Similarity=0.267 Sum_probs=53.4
Q ss_pred cceeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecc-cCHHHHHHHHHhcCC-ceE
Q 041984 20 LNGKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDG-MDPVLLTSLLRKTMR-FAE 86 (98)
Q Consensus 20 m~qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~-vDp~~lv~kLrKk~~-~ae 86 (98)
|++++.|++. |+|..|..++.+.+.+++||.++.+|... ++++|..+. +++..+.+.+++ .| .+.
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~-~G~~~~ 68 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFAL-EQAVVSYHGETTPQILTDAVER-AGYHAR 68 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEC---CHHHHHHHHHH-HTCEEE
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCCCHHHHHHHHHH-cCCCce
Confidence 5678889996 99999999999999999999999999976 699987542 678888888887 45 444
No 9
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.76 E-value=1.6e-08 Score=57.19 Aligned_cols=57 Identities=7% Similarity=0.134 Sum_probs=51.1
Q ss_pred EEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 24 VVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 24 vVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
+.|++ .|+|..|..++.+.+.+++||.++.+|... ++++|.+. +++..+.+.+++ .|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~-~~~~~i~~~i~~-~G 60 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTS-KKVTITSA-LGEEQLRTAIAS-AG 60 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTT-CEEEEECS-SCHHHHHHHHHH-TT
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecC-CEEEEEec-CCHHHHHHHHHH-cC
Confidence 46778 599999999999999999999999999976 69999987 999999999987 55
No 10
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.75 E-value=4.1e-08 Score=72.78 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=61.2
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEEccCC
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLTVINL 93 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivsv~p~ 93 (98)
.++.|+|+|+|..|.+++.+++.+++||.++++|... .+++|.+. +++..+.+.|++ .| .++++..++.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~-~~v~V~~~-~~~~~I~~aI~~-~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQ-QIMSVESS-VAPSTIINTLRN-CGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEES-SCHHHHHHHHHH-TTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCC-CEEEEecc-CCHHHHHHHHHH-cCCccccccCCCc
Confidence 4567888999999999999999999999999999976 69999997 999999999998 56 7888776654
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.69 E-value=1.6e-07 Score=54.34 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=51.8
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
+++.|++. |+|..|..++.+.+.+++||.++.+|... ++++|..+ .+++..+.+.+++ .|
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G 67 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAE-GTVEVTIDSSVVTLKDIVAVIED-QG 67 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEETTTSCHHHHHHHHHH-TT
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 67788985 99999999999999999999999999976 69998743 2688889999987 45
No 12
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.62 E-value=1.6e-07 Score=70.90 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=61.4
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC-ceEEEEccCC
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR-FAELLTVINL 93 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~-~aeivsv~p~ 93 (98)
.++.|+|+|+|..|..++.+++.+++||.++++|... .+++|.+. +++..|.+.|++ .| .+.++..++.
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~-~~v~V~~~-~~~~~I~~aIe~-~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQ-QIMSVESS-VAPSTIINTLRN-CGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEES-SCHHHHHHHHHT-TTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCC-CeEEEecC-CCHHHHHHHHHH-hCCCcccccCCcc
Confidence 4567888899999999999999999999999999976 69999987 999999999998 56 7888776654
No 13
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.57 E-value=8.2e-07 Score=52.02 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=55.4
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEEc
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLTV 90 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivsv 90 (98)
+++.|++ .|+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+.+ .| .+++...
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~ 72 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEE-KNATIIYDPKLQTPKTLQEAIDD-MGFDAVIHNI 72 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-TTCCEEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCceEeecC
Confidence 4566777 599999999999999999999999999976 69999765 2678889999987 56 6766543
No 14
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.57 E-value=5.9e-07 Score=51.81 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=54.5
Q ss_pred eEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec-ccCHHHHHHHHHhcCC-ceEEEE
Q 041984 23 KVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD-GMDPVLLTSLLRKTMR-FAELLT 89 (98)
Q Consensus 23 kvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~-~vDp~~lv~kLrKk~~-~aeivs 89 (98)
++.|+++ |+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+++ .| .++++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~-~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVT-NECQVTYDNEVTADSIKEIIED-CGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTT-TEEEEEECTTSCHHHHHHHHHH-HTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCHHHHHHHHHH-CCCceEEcc
Confidence 4567885 99999999999999999999999999976 69998753 2688899999988 46 677664
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.56 E-value=4.1e-07 Score=52.53 Aligned_cols=64 Identities=19% Similarity=0.123 Sum_probs=53.5
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEE
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAEL 87 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aei 87 (98)
+++.|++. |+|..|..++.+.+.+++||.++.+|... ++++|..+ .+++..+.+.+.+ .| .+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFET-RQAVVTFDDAKTSVQKLTKATAD-AGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEEETTTCCHHHHHHHHHH-TTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHh-cCCCeEe
Confidence 56778884 99999999999999999999999999976 69999765 2678889999987 56 4543
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.55 E-value=7.3e-07 Score=50.09 Aligned_cols=60 Identities=8% Similarity=0.144 Sum_probs=50.5
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
.+..|++. |+|.+|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+++ .|
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G 64 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEA-GKVDVSFDADKVSVKDIADAIED-QG 64 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-TT
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 35568886 99999999999999999999999999876 69998754 2678888888887 45
No 17
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.52 E-value=5.6e-07 Score=51.92 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=53.1
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecc--cCHHHHHHHHHhcCC-ceE
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDG--MDPVLLTSLLRKTMR-FAE 86 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~--vDp~~lv~kLrKk~~-~ae 86 (98)
++..|++ .|+|..|..++.+.+.+++||.++.++... ++++|..+. +++..+.+.+++ .| .+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~ 69 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLAN-SNGTVEYDPLLTSPETLRGAIED-MGFDAT 69 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-HTCEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCcCCHHHHHHHHHH-CCCCcE
Confidence 5678888 599999999999999999999999999976 699998752 578889998987 45 444
No 18
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.51 E-value=1.5e-07 Score=59.02 Aligned_cols=59 Identities=7% Similarity=0.050 Sum_probs=53.4
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
+++.|+|. |+|..|..++.+.+.+++||.++.+|... ++++|.++ +++..|.+.+++ .|
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~-~~~~V~~~-~~~~~i~~~i~~-~G 81 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPAS-RTVVVGGV-SDAAHIAEIITA-AG 81 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTT-TEEEEESC-CCHHHHHHHHHH-TT
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCC-CEEEEEec-CCHHHHHHHHHH-cC
Confidence 56788884 99999999999999999999999999976 69999987 999999999987 45
No 19
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.49 E-value=5.4e-07 Score=52.71 Aligned_cols=49 Identities=22% Similarity=0.309 Sum_probs=43.5
Q ss_pred cceeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccC
Q 041984 20 LNGKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMD 70 (98)
Q Consensus 20 m~qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vD 70 (98)
|+++..|++. |+|..|..++.+.+.+++||.++.+|... ++++|.++ .+
T Consensus 1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~-~~ 50 (71)
T 2aj0_A 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGA-SKITVTGE-AS 50 (71)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSS-EEEEEEES-CC
T ss_pred CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCC-CEEEEEec-Cc
Confidence 4567889996 99999999999999999999999999976 69999887 55
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.46 E-value=7.7e-07 Score=55.59 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=55.3
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhc--CC-ceEEEEcc
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKT--MR-FAELLTVI 91 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk--~~-~aeivsv~ 91 (98)
+++.|+| .|+|..|..++.+++.+++||.++.+|... ++++|..+ .+++..+.+.+.+. .| .+.+++..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~-~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLEN-RSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTT-TEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccC-CEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 3556777 599999999999999999999999999976 69999754 26888999999984 13 46655543
No 21
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.45 E-value=1e-06 Score=53.63 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=55.8
Q ss_pred ceeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEE
Q 041984 21 NGKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLT 89 (98)
Q Consensus 21 ~qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivs 89 (98)
.+++.|++ .|+|..|..++.+.+.+++||.++.+|... ++++|..+ .+++..+.+.+++ .| .+.+..
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 78 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDN-QEATIVYQPHLISVEEMKKQIEA-MGFPAFVKK 78 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTT-TEEEEEECTTTCCHHHHHHHHHH-TTCCEECSC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCceEecC
Confidence 36778888 599999999999999999999999999976 69999875 2678889999987 56 555443
No 22
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.43 E-value=1.8e-06 Score=50.59 Aligned_cols=60 Identities=18% Similarity=0.169 Sum_probs=49.7
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
+++.|++. |+|..|..++.+.+.+++||.++.+|... ++++|..+.-.+..+.+.+.+ .|
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~-~~~~v~~~~~~~~~i~~~i~~-~G 63 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFAT-EKLVVDADNDIRAQVESALQK-AG 63 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTT-TEEEEEESSCCHHHHHHHHHH-HT
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCHHHHHHHHHH-cC
Confidence 56778886 99999999999999999999999999976 699998763235667777776 45
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.41 E-value=1.5e-06 Score=50.28 Aligned_cols=61 Identities=13% Similarity=0.200 Sum_probs=51.4
Q ss_pred ceeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 21 NGKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 21 ~qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
+++..|+|. |+|..|..++.+.+.+++||.++.+|... ++++|.-+ .+++..+.+.+.+ .|
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G 68 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLAT-ETVNVIYDPAETGTAAIQEKIEK-LG 68 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGG-TEEEEEECTTTCCHHHHHHHHHH-HT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-CC
Confidence 366788885 99999999999999999999999999876 68888743 2678888888887 45
No 24
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.41 E-value=8.4e-07 Score=58.69 Aligned_cols=70 Identities=11% Similarity=0.061 Sum_probs=58.5
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEEccCC
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLTVINL 93 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivsv~p~ 93 (98)
+++.|+| .|+|..|..++.+.+.+++||.++.++... ++++|.-+ .+++..|.+.+++ .| .+.+++..+.
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~~~~ 147 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFAL-ETVTVEYNPKEASVSDLKEAVDK-LGYKLKLKGEQDS 147 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTT-TEEEEEECTTTCCHHHHHHHHHH-HTCCEEESCSSSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccC-CEEEEEECCCCCCHHHHHHHHHH-cCCCeEEcCcccc
Confidence 5678999 599999999999999999999999999876 69999843 2789999999998 56 6777655443
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.40 E-value=2e-06 Score=50.82 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=55.2
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEE
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLT 89 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivs 89 (98)
+++.|++ .|+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+.+ .| .+.++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 72 (77)
T 1y3j_A 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMA-GKAEVRYNPAVIQPPMIAEFIRE-LGFGATVIE 72 (77)
T ss_dssp EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTT-TBEEEEECTTTSCHHHHHHHHHH-HTSCEEEES
T ss_pred EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCceEECC
Confidence 6678888 599999999999999999999999999976 69999764 2678889999987 46 566654
No 26
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.40 E-value=1.3e-06 Score=49.61 Aligned_cols=61 Identities=15% Similarity=0.214 Sum_probs=50.7
Q ss_pred EEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEE
Q 041984 25 VIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAEL 87 (98)
Q Consensus 25 VlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aei 87 (98)
.+++ .|+|..|..++.+.+.+++||.++.+|... ++++|..+ .+++..+.+.+++ .| .+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKK-EKAVVKFDEANVQATEICQAINE-LGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHT-TSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCCccc
Confidence 3556 499999999999999999999999999976 69999865 2678889999987 56 5554
No 27
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.39 E-value=1.3e-06 Score=51.74 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=56.5
Q ss_pred CccccceeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEE
Q 041984 16 PMSFLNGKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELL 88 (98)
Q Consensus 16 p~~~m~qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeiv 88 (98)
|... .+++.|++ .|+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+++ .| .+.+.
T Consensus 3 p~~~-~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~ 76 (79)
T 1kvi_A 3 PSMG-VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEE-KNATIIYDPKLQTPKTLQEAIDD-MGFDAVIH 76 (79)
T ss_dssp CTTT-CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGG-TEEEEEECTTTCCHHHHHHHHHH-HCCCEEEC
T ss_pred ccCC-cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccC-CEEEEEECCCCCCHHHHHHHHHH-CCCceEec
Confidence 4433 36778888 599999999999999999999999999976 69999765 2578889999987 46 56554
No 28
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.37 E-value=1.4e-06 Score=50.53 Aligned_cols=64 Identities=9% Similarity=0.111 Sum_probs=51.8
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecc--cCHHHHHHHHHhcCC-ceEE
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDG--MDPVLLTSLLRKTMR-FAEL 87 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~--vDp~~lv~kLrKk~~-~aei 87 (98)
+++.|++ .|+|..|..++.+.+.+++||.++.+|... ++++|..+. +++..+.+.+.+ .| .+.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALAT-NKAHIKYDPEIIGPRDIIHTIES-LGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTT-TEEEEEECTTTTHHHHHHHHHHH-HHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCCcee
Confidence 5677888 599999999999999999999999999976 699997652 456778888876 45 4443
No 29
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.36 E-value=1.5e-06 Score=49.06 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=47.3
Q ss_pred EEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec-ccCHHHHHHHHHh
Q 041984 24 VVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD-GMDPVLLTSLLRK 80 (98)
Q Consensus 24 vVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~-~vDp~~lv~kLrK 80 (98)
..|++. |+|..|..++.+.+.+++||.++.+|... ++++|..+ ..++..+.+.+++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~ 60 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEK-KSVVVEFDAPATQDLIKEALLD 60 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTT-TEEEEEECTTCCHHHHHHHHHH
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCC-CEEEEEECCCCCHHHHHHHHHH
Confidence 456674 99999999999999999999999999976 69999865 2477888888876
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.33 E-value=3.7e-06 Score=47.66 Aligned_cols=60 Identities=12% Similarity=0.188 Sum_probs=50.2
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
++..+++. |+|.+|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+.+ .|
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G 65 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVAT-GRLTVTYDPKQVSEITIQERIAA-LG 65 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTT-TEEEEEECTTTCCTHHHHHHHHT-TT
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 45567886 99999999999999999999999999976 69998754 2677888888886 55
No 31
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.31 E-value=7.2e-07 Score=51.76 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=47.4
Q ss_pred EEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 24 VVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 24 vVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
..|++ .|+|.+|..++.+.+.++ ||.++.+|... ++++|.++ .+ ..+...+++ .|
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~-~~~~v~~~-~~-~~i~~~i~~-~G 58 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEE-KKVVVETE-NL-DSVLKKLEE-ID 58 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTT-TEEEEECS-CH-HHHHHHHHT-TT
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCC-CEEEEEEC-CH-HHHHHHHHH-cC
Confidence 45777 699999999999999999 99999999976 69999887 44 778888887 55
No 32
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.22 E-value=3.2e-06 Score=48.53 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=49.2
Q ss_pred EEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec-ccCHHHHHHHHHhcCC-ceE
Q 041984 26 IKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD-GMDPVLLTSLLRKTMR-FAE 86 (98)
Q Consensus 26 lKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~-~vDp~~lv~kLrKk~~-~ae 86 (98)
|++ .|+|..|..++.+.+.+++||.++.+|... ++++|..+ ..++..+.+.+++ .| .+.
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~i~~~i~~-~Gy~~~ 65 (69)
T 2kt2_A 4 LKITGMTCDSCAAHVKEALEKVPGVQSALVSYPK-GTAQLAIVPGTSPDALTAAVAG-LGYKAT 65 (69)
T ss_dssp EEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTT-TEEEEEECTTSCHHHHHHHHHT-TTSEEE
T ss_pred EEECCcccHHHHHHHHHHHHcCCCeeEEEEEccC-CEEEEEECCCCCHHHHHHHHHH-CCCceE
Confidence 556 599999999999999999999999999976 68888754 2578889999987 56 443
No 33
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.22 E-value=7.7e-06 Score=48.01 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=53.6
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEE
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLT 89 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivs 89 (98)
.+..|++. |+|..|..++.+.+.+++||.++.++... ++++|.-+ ..++..+...+.+ .| .+.+..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~~ 72 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFAL-ETVTVEYNPKEASVSDLKEAVDK-LGYKLKLKG 72 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSS-SEEEEEECTTTCCHHHHHHHHHH-HTSEEEECC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHH-cCCeEEecC
Confidence 45678886 99999999999999999999999999876 68888643 2678888888887 56 555543
No 34
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.21 E-value=7.9e-06 Score=53.04 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=52.4
Q ss_pred ceeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 21 NGKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 21 ~qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
++++.|+|. |+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+++ .|
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~-~~~~V~~~~~~~~~~~i~~~i~~-~G 70 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVAT-GRLTVTYDPKQVSEITIQERIAA-LG 70 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTT-TEEEEEECTTTCSHHHHHHHHHT-TT
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCC-CEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 367889995 99999999999999999999999999976 69999765 2577888998987 55
No 35
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.18 E-value=4e-06 Score=54.96 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=54.2
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEE
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAEL 87 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aei 87 (98)
+++.|+| .|+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..+.+.+.+ .| .+++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALAT-SKALVKFDPEIIGPRDIIKIIEE-IGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTT-TEEEEECCTTTSCHHHHHHHHHH-HTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCC-CEEEEEECCCCCCHHHHHHHHHh-CCCceEe
Confidence 5678999 699999999999999999999999999976 69999765 2678899999987 56 4543
No 36
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.09 E-value=2.1e-05 Score=48.94 Aligned_cols=69 Identities=14% Similarity=0.134 Sum_probs=56.3
Q ss_pred eeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecc--cCHHHHHHHHHhcCC-ceEEEEccC
Q 041984 22 GKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDG--MDPVLLTSLLRKTMR-FAELLTVIN 92 (98)
Q Consensus 22 qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~--vDp~~lv~kLrKk~~-~aeivsv~p 92 (98)
.++.|.| .|+|..|..++.+.+.+++||.++.++... ++++|..+. +++..+...+.. .| .+.+...+.
T Consensus 16 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~~~ 88 (95)
T 2kkh_A 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPS-RTVIVVHDSLLISPFQIAKALNE-ARLEANVRVNGE 88 (95)
T ss_dssp EEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-HTCCEEESCCCC
T ss_pred EEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccC-CEEEEEECCCCCCHHHHHHHHHH-cCCceEEecCCC
Confidence 5678888 599999999999999999999999999976 699998652 578888998987 56 566654443
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.08 E-value=1.5e-05 Score=55.89 Aligned_cols=67 Identities=12% Similarity=0.192 Sum_probs=55.6
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEEEc
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELLTV 90 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeivsv 90 (98)
+++.|+|. |+|..|..++.+.+.+++||.++.++... ++++|..+ .+++..|...|++ .| .+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAE-GTATVLYNPAVISPEELRAAIED-MGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-HTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccC-CEEEEEECCCCCCHHHHHHHHHH-cCCceEEcCC
Confidence 56889994 99999999999999999999999999976 69999754 2688899999987 56 6776654
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=97.94 E-value=3.5e-05 Score=50.34 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=54.3
Q ss_pred ceeEEEEE-eecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC-ceEEE
Q 041984 21 NGKVVIKL-SLEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR-FAELL 88 (98)
Q Consensus 21 ~qkvVlKV-~m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~-~aeiv 88 (98)
++++.|.| .|+|.+|..++.+.+.+++||.++.++... ++++|..+ ..++..+...+.. .| .+.++
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMA-GKAEIKYDPEVIQPLEIAQFIQD-LGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-HTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecC-CEEEEEEcCCCCCHHHHHHHHhc-CCCceEee
Confidence 37888999 599999999999999999999999999865 68888753 2677889998887 45 45543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=97.73 E-value=0.00013 Score=51.14 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=51.0
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhc
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKT 81 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk 81 (98)
+++.|+|. |+|.+|..++.+.+.+++||.++.++... ++++|..+ .+++..+...+++.
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLEN-KTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHTTS
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecC-CEEEEEECCCCCCHHHHHHHHHHh
Confidence 67789996 99999999999999999999999999866 69999765 26778888888874
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.52 E-value=0.00043 Score=45.36 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=48.1
Q ss_pred eeEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHh
Q 041984 22 GKVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRK 80 (98)
Q Consensus 22 qkvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrK 80 (98)
++..+.+. |+|.+|..++.+.+.+++||.++.++... ++++|..+ ..++..+...++.
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-~~~~v~~~~~~~~~~~i~~~i~~ 66 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLAT-ETVNVIYDPAETGTAAIQEKIEK 66 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGG-TEEEEEECTTTSCHHHHHHHHHH
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccC-CEEEEEEcCCcCCHHHHHHHHHH
Confidence 56667885 99999999999999999999999999865 58888643 2577888888876
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.05 E-value=0.0016 Score=54.78 Aligned_cols=59 Identities=10% Similarity=0.121 Sum_probs=51.2
Q ss_pred eEEEEEe-ecchhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEec--ccCHHHHHHHHHhcCC
Q 041984 23 KVVIKLS-LEGHKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGD--GMDPVLLTSLLRKTMR 83 (98)
Q Consensus 23 kvVlKV~-m~ce~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~--~vDp~~lv~kLrKk~~ 83 (98)
++.++|+ |+|..|..++.+.+.+++||+++.++... ++++|.-+ .+++..+.+.+++ .|
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~-~~~~V~~d~~~~~~~~i~~ai~~-~G 64 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLAT-ETAFIRFDEKRIDFETIKRVIED-LG 64 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTT-TEEEEEECTTTCCHHHHHHHHHH-HC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCC-CEEEEEeCCCcCCHHHHHHHHHh-cC
Confidence 4567885 99999999999999999999999999976 69999753 3789999999997 45
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=88.30 E-value=0.65 Score=30.99 Aligned_cols=62 Identities=10% Similarity=0.157 Sum_probs=42.6
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEe-----cCCCCC-eEEEEecccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVAL-----KGDDRS-QIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~i-----d~~~k~-kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.++||-|-=--+=---..-+.+++++||+.|.+ |.+..+ ++|+-|+.+|...+.+.+.+-.+
T Consensus 7 RRlVLDVlKPh~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 7 RRLVLDVLKPHEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG 74 (100)
T ss_dssp EEEEEEEEEESCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC
T ss_pred eEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 456665532123333455667888999998865 433222 78999999999999999998555
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=86.75 E-value=0.98 Score=29.91 Aligned_cols=61 Identities=15% Similarity=0.262 Sum_probs=42.7
Q ss_pred eeEEEEE--eecchhhHHHHHHHhcCCCceeEEEe-----cCCCCC-eEEEEecccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKL--SLEGHKSRSKALKIAVRVSGVESVAL-----KGDDRS-QIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV--~m~ce~C~~Kv~k~i~~~~GV~SV~i-----d~~~k~-kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.++||-| ++|-..- -..-+.+++++||+.|.+ |.+..+ ++|+-|+.+|...+.+.+.+-.+
T Consensus 5 rRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp EEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred EEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 5566666 3443333 344566778999998865 433222 78999999999999999998555
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=86.31 E-value=0.94 Score=30.05 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=40.9
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEe-----cCCCCC-eEEEEecccCHHHHHHHHHhcCC
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVAL-----KGDDRS-QIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~i-----d~~~k~-kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.++||-|-=.-+=---..-+.+++++||+.|.+ |.+..+ ++|+-|+.+|-..+.+.+.+-.+
T Consensus 7 rRlVLDVlKPh~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 7 IRIVLDILKPHEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp EEEEEEEECCSCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred eEEEEEecCCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 455555531112223344566777888887754 443322 78999999999999999998555
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=74.81 E-value=11 Score=24.04 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=33.5
Q ss_pred hhhHHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHH
Q 041984 33 HKSRSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLR 79 (98)
Q Consensus 33 e~C~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLr 79 (98)
.+-...+...|..++||+-...|++. +++.|+=++-+...+.+.+.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~-GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPS-GQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTT-TEEEEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCC-CCEEEEEEeCCHHHHHHHHH
Confidence 46678999999999999655566644 68888877556666655554
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=74.13 E-value=6.9 Score=25.08 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=30.7
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEecC
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVALKG 56 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~id~ 56 (98)
-++|+.+.-.+.+--.+..+.+.+++||.|+++=.
T Consensus 42 GkiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lvy 76 (95)
T 2jsx_A 42 GQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVY 76 (95)
T ss_dssp TEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESS
T ss_pred CCEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEEE
Confidence 37899999888888888889999999999999854
No 47
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=61.16 E-value=24 Score=22.55 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHH
Q 041984 36 RSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLL 78 (98)
Q Consensus 36 ~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kL 78 (98)
.-+..+.+....|+.+|+++.++ +++++.|. |...+-++.
T Consensus 33 gGk~Ik~I~e~tGv~~IdI~edd-G~V~I~g~--~~ea~~~A~ 72 (91)
T 2cpq_A 33 HGSNIQQARKVPGVTAIELDEDT-GTFRIYGE--SADAVKKAR 72 (91)
T ss_dssp TTHHHHHHHTSTTEEEEEEETTT-TEEEEEES--SHHHHHHHH
T ss_pred CcHHHHHHHHHhCCeEEEEEcCC-CEEEEEEC--CHHHHHHHH
Confidence 35667777778899889998644 69999996 555554443
No 48
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=52.01 E-value=5.5 Score=26.41 Aligned_cols=29 Identities=21% Similarity=0.504 Sum_probs=17.0
Q ss_pred ceEEEEEee---------cCCccccceeEEEEEeecchhhHH
Q 041984 5 NLELVFTCT---------YGPMSFLNGKVVIKLSLEGHKSRS 37 (98)
Q Consensus 5 ~~~~~~~~~---------~~p~~~m~qkvVlKV~m~ce~C~~ 37 (98)
.+.|.|||+ +++.+--.-.|.+ .|++|..
T Consensus 9 ~~~l~FTC~~C~tRs~k~iSk~aY~~GvViv----~C~gC~n 46 (100)
T 2e2z_A 9 KMMIAFTCKKCNTRSSHTMSKQAYEKGTVLI----SCPHCKV 46 (100)
T ss_dssp EEEEEEEETTTTEEEEEEEEHHHHHTSEEEE----ECTTTCC
T ss_pred cEEEEEEccCCCCcchhhcCHHHhhCCEEEE----EcCCCcc
Confidence 478999997 2223222223333 4999864
No 49
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=51.99 E-value=31 Score=22.12 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=30.7
Q ss_pred HHHHHHhcCCCceeEEEecCCCCCeEEEEec-ccCHHHHHHHHHh
Q 041984 37 SKALKIAVRVSGVESVALKGDDRSQIEVTGD-GMDPVLLTSLLRK 80 (98)
Q Consensus 37 ~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~-~vDp~~lv~kLrK 80 (98)
+-.-+.+-+++||++|-+.. |=+||+-+ .+|-..|.-.++.
T Consensus 39 SPLA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 39 PEFINRLFEIEGVKSIFYVL---DFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp CHHHHHHHTSTTEEEEEEET---TEEEEEECTTCCHHHHHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHH
Confidence 33444555799999999975 79999986 3788887777664
No 50
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=51.34 E-value=33 Score=19.73 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=26.9
Q ss_pred eeEEEEEeecchhhHHHHHHHhcCCCceeEEEe
Q 041984 22 GKVVIKLSLEGHKSRSKALKIAVRVSGVESVAL 54 (98)
Q Consensus 22 qkvVlKV~m~ce~C~~Kv~k~i~~~~GV~SV~i 54 (98)
..+++.+......--..+++.+.+++||.++..
T Consensus 45 ~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 45 FTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 456777777777777899999999999999865
No 51
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=40.58 E-value=31 Score=21.52 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=25.8
Q ss_pred eEEEEEeecchhh------HHHHHHHhcCCCceeEEEecC
Q 041984 23 KVVIKLSLEGHKS------RSKALKIAVRVSGVESVALKG 56 (98)
Q Consensus 23 kvVlKV~m~ce~C------~~Kv~k~i~~~~GV~SV~id~ 56 (98)
.+.+.+.+.+.+| +..+..++..++||.+++++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 5666666666665 467788888999999998875
No 52
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=40.06 E-value=45 Score=21.27 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=33.5
Q ss_pred ecCCccccceeEEEEEeecchhh--HHHHHHHhcCCCceeEEEecC
Q 041984 13 TYGPMSFLNGKVVIKLSLEGHKS--RSKALKIAVRVSGVESVALKG 56 (98)
Q Consensus 13 ~~~p~~~m~qkvVlKV~m~ce~C--~~Kv~k~i~~~~GV~SV~id~ 56 (98)
-..|.+.--++.-+-+-+.+++. -..+-..++.++||.|+++..
T Consensus 42 k~~pIafGlk~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 42 EREPIAFGLVALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EEEECTTSCEEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred eEEEEEcceeeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 34566665577777777777644 788889999999999999854
No 53
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=39.63 E-value=20 Score=22.85 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=26.8
Q ss_pred eeEEEEEeecchhh------HHHHHHHh-cCCCceeEEEecC
Q 041984 22 GKVVIKLSLEGHKS------RSKALKIA-VRVSGVESVALKG 56 (98)
Q Consensus 22 qkvVlKV~m~ce~C------~~Kv~k~i-~~~~GV~SV~id~ 56 (98)
..+.+.+.+...+| +..+..++ ..++||.++.++.
T Consensus 44 ~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 44 NNAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp CCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CeEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 35677777766666 56788888 8899999998865
No 54
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=39.10 E-value=26 Score=23.54 Aligned_cols=30 Identities=27% Similarity=0.253 Sum_probs=25.2
Q ss_pred eEEEEecccCHHHHHHHHHhc-CCceEEEEcc
Q 041984 61 QIEVTGDGMDPVLLTSLLRKT-MRFAELLTVI 91 (98)
Q Consensus 61 kvtV~G~~vDp~~lv~kLrKk-~~~aeivsv~ 91 (98)
=+.|+|+ -|-.-++++||.+ ...+.++++.
T Consensus 112 ~vLvSgD-~DF~plv~~lr~~~G~~V~v~g~~ 142 (165)
T 2qip_A 112 VILVSGD-GDFSLLVERIQQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEECCC-GGGHHHHHHHHHHHCCEEEEEECG
T ss_pred EEEEECC-hhHHHHHHHHHHHcCcEEEEEeCC
Confidence 5678898 7999999999996 5589888864
No 55
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=36.12 E-value=30 Score=22.03 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=30.0
Q ss_pred HHHHHHhcCCCceeEEEecCCCCCeEEEEec-ccCHHHHHHHHHh
Q 041984 37 SKALKIAVRVSGVESVALKGDDRSQIEVTGD-GMDPVLLTSLLRK 80 (98)
Q Consensus 37 ~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~-~vDp~~lv~kLrK 80 (98)
+-.-+.|-.++||.+|-+.. |=+||+-. .+|-..|.-.++.
T Consensus 39 SPLA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIFHVM---DFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp CHHHHHHHHSTTEEEEEEET---TEEEEEECTTSCSTTTHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHH
Confidence 34444555799999999975 79999986 3677777666654
No 56
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=33.51 E-value=47 Score=20.62 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=25.4
Q ss_pred eEEEEEeecchhh------HHHHHHHhcCCCceeEEEecCC
Q 041984 23 KVVIKLSLEGHKS------RSKALKIAVRVSGVESVALKGD 57 (98)
Q Consensus 23 kvVlKV~m~ce~C------~~Kv~k~i~~~~GV~SV~id~~ 57 (98)
.+.+.+.+...+| +..+..++..++||.+++++..
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4556666665555 4567888889999999988753
No 57
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=30.18 E-value=33 Score=25.49 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=19.8
Q ss_pred CeEEEEecccCHHHHHHHHHhcCC
Q 041984 60 SQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 60 ~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
-.+.|+|+ +|+..+...+++.++
T Consensus 190 ~~l~vvGd-~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 190 ATVVVVGD-VEHEAVFRLAEQTYG 212 (445)
T ss_dssp EEEEEEES-CCHHHHHHHHHHTGG
T ss_pred eEEEEEcC-CCHHHHHHHHHHHhc
Confidence 37889998 999999999987664
No 58
>3g74_A Protein of unknown function; APC21008.1, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; 2.43A {Eubacterium ventriosum atcc 27560}
Probab=28.32 E-value=44 Score=21.44 Aligned_cols=25 Identities=4% Similarity=0.128 Sum_probs=22.4
Q ss_pred cCHHHHHHHHHhcCCceEEEEccCC
Q 041984 69 MDPVLLTSLLRKTMRFAELLTVINL 93 (98)
Q Consensus 69 vDp~~lv~kLrKk~~~aeivsv~p~ 93 (98)
+|..++++++++.++++++-..||.
T Consensus 60 isvm~II~~I~~~~P~l~I~~iGe~ 84 (100)
T 3g74_A 60 VSIMKIIEMADQTFQNVDIQNIGET 84 (100)
T ss_dssp EEHHHHHHHHHHHCSSEEEEECSCS
T ss_pred EEHHHHHHHHHHHCCCceEEEcCCC
Confidence 6889999999999999999888875
No 59
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=25.36 E-value=97 Score=17.69 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=17.8
Q ss_pred EEeecchhhHHHHHHHhcCCCceeEEEecC
Q 041984 27 KLSLEGHKSRSKALKIAVRVSGVESVALKG 56 (98)
Q Consensus 27 KV~m~ce~C~~Kv~k~i~~~~GV~SV~id~ 56 (98)
.+.+.++. .+.+.+.+||+.|+-|.
T Consensus 36 ~~~lp~~~-----~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 36 VVDVPANA-----VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEECGGG-----HHHHHTSTTEEEEEECC
T ss_pred EEEeCHHH-----HHHHhcCCCceEEecCc
Confidence 34454444 35577999999999985
No 60
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=24.59 E-value=60 Score=23.63 Aligned_cols=23 Identities=9% Similarity=0.247 Sum_probs=19.9
Q ss_pred CeEEEEecccCHHHHHHHHHhcCC
Q 041984 60 SQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 60 ~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
-.+.|+|+ +|+..+.+.+++.++
T Consensus 190 ~~l~v~Gd-~~~~~~~~~~~~~f~ 212 (424)
T 3amj_B 190 AVVTLVGD-ITRAEAETIAQQLTA 212 (424)
T ss_dssp CEEEEEES-CCHHHHHHHHHHTTT
T ss_pred eEEEEEeC-CCHHHHHHHHHHHHh
Confidence 48899999 999999999987665
No 61
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=24.36 E-value=1.1e+02 Score=19.21 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=30.6
Q ss_pred CCccccceeEEEEEeecch-hhHHHHHHHhcCCCceeEEEecC
Q 041984 15 GPMSFLNGKVVIKLSLEGH-KSRSKALKIAVRVSGVESVALKG 56 (98)
Q Consensus 15 ~p~~~m~qkvVlKV~m~ce-~C~~Kv~k~i~~~~GV~SV~id~ 56 (98)
.|.+.--++.-+-+-+.++ +--..+-..++.++||.|+++..
T Consensus 42 ~piafGlk~L~i~~vveD~~~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 42 EPIAFGLVALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp EECSSSCEEEEEEEEESSSCGGGGHHHHHHTTSCSSEEEEEEE
T ss_pred EEEEcceeeEEEEEEEEcCCcChHHHHHHHhccCCccEEEEEE
Confidence 4555544666666666554 66678888899999999999864
No 62
>3hrg_A Uncharacterized protein BT_3980 with actin-like A fold; NP_812891.1, bacteroides thetaiotaomicron BT_3980; HET: MSE UNL; 1.85A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.03 E-value=99 Score=22.47 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=29.5
Q ss_pred EecCCCCCeEEEEecccCHHHHHHHHHhcCCceEEEEcc
Q 041984 53 ALKGDDRSQIEVTGDGMDPVLLTSLLRKTMRFAELLTVI 91 (98)
Q Consensus 53 ~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~~aeivsv~ 91 (98)
.+|.+ ++++.+.|+.-+-..+.+.|+|-.+++.++.+.
T Consensus 208 ~ld~e-~~~l~l~G~i~~~~~l~~~L~~Yi~~v~~~~p~ 245 (257)
T 3hrg_A 208 EFNQE-RDELHLTGTLSDKETLMNELKKFILQVFIMNPA 245 (257)
T ss_dssp TCCTT-TCEEEEEECCTTHHHHHHHHHHHCSCEEECSSS
T ss_pred CCCcc-ccEEEEEecCCCcHHHHHHHHHHHhhEEEeCcc
Confidence 35665 489999999444668889999988899988643
No 63
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=23.56 E-value=48 Score=24.25 Aligned_cols=23 Identities=17% Similarity=0.112 Sum_probs=19.5
Q ss_pred CeEEEEecccCHHHHHHHHHhcCC
Q 041984 60 SQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 60 ~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
-.+.|.|+ +|+..+.+.+++.++
T Consensus 183 ~~l~v~Gd-~~~~~~~~~i~~~f~ 205 (406)
T 3eoq_A 183 MVLAATGR-VDFDRLLAEAERLTE 205 (406)
T ss_dssp EEEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEEcC-CCHHHHHHHHHHHhc
Confidence 37889998 999999999988664
No 64
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=23.44 E-value=2e+02 Score=21.25 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=30.8
Q ss_pred hHHHHHHHhcCCCcee--EEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 35 SRSKALKIAVRVSGVE--SVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 35 C~~Kv~k~i~~~~GV~--SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
..+.+++++.. +++. ++.-.. |++.|.|+ |+..++++|++-+|
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~~---gri~V~~~--~~~~~~~~L~~vfG 70 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSRH---GRIIVKTN--SPKEAANVLVRVFG 70 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEET---TEEEEECS--CHHHHHHHHTTSTT
T ss_pred HHHHHHHHhcc-cCccceeEEEEC---CEEEEEcC--CHHHHHHHHhhcCC
Confidence 55666777766 6776 366543 68888865 88889999988666
No 65
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=22.65 E-value=49 Score=25.55 Aligned_cols=22 Identities=18% Similarity=0.389 Sum_probs=19.3
Q ss_pred eEEEEecccCHHHHHHHHHhcCC
Q 041984 61 QIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 61 kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.|.|.|+ +|+..+.+.+++.++
T Consensus 213 ~l~vvGd-vd~~~~~~~i~~~f~ 234 (492)
T 3go9_A 213 TLYVVGN-VDSRSIAAQISKAFS 234 (492)
T ss_dssp EEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEcC-CCHHHHHHHHHHHhh
Confidence 7889998 999999999988665
No 66
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=22.34 E-value=73 Score=18.49 Aligned_cols=19 Identities=21% Similarity=0.092 Sum_probs=15.6
Q ss_pred HHHHHhcCCCceeEEEecC
Q 041984 38 KALKIAVRVSGVESVALKG 56 (98)
Q Consensus 38 Kv~k~i~~~~GV~SV~id~ 56 (98)
...+.|++.+||.+|+.|.
T Consensus 53 ~~~~~L~~~p~V~~Ve~D~ 71 (80)
T 3cnq_P 53 KAVEELKKDPSVAYVEEDK 71 (80)
T ss_dssp HHHHHHHTCTTEEEEEECC
T ss_pred HHHHHHHhCCCccEEEeCc
Confidence 3467888999999999874
No 67
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=22.21 E-value=1.4e+02 Score=19.42 Aligned_cols=31 Identities=10% Similarity=0.265 Sum_probs=19.2
Q ss_pred HHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHH
Q 041984 37 SKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPV 72 (98)
Q Consensus 37 ~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~ 72 (98)
..+++....++.+ .|+++. +.||++|. ++..
T Consensus 67 ~~aL~~~~~l~~i-~V~V~~---g~VtLsG~-v~s~ 97 (132)
T 2kgs_A 67 EPVFTASVPIPDF-GLKVER---DTVTLTGT-APSS 97 (132)
T ss_dssp HHHHHHHTTCTTC-EEEEEE---TEEEEECE-ESSH
T ss_pred HHHHHhcCcCCce-EEEEEC---CEEEEEEE-ECCH
Confidence 4555555555433 355543 68889998 7654
No 68
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.17 E-value=94 Score=21.70 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=22.3
Q ss_pred EEecCCCCCeEEEEecccCHHHHHHHHHhc
Q 041984 52 VALKGDDRSQIEVTGDGMDPVLLTSLLRKT 81 (98)
Q Consensus 52 V~id~~~k~kvtV~G~~vDp~~lv~kLrKk 81 (98)
..+|.++ +++.+.|. .++..|-+.|++.
T Consensus 72 g~id~~~-~rlii~G~-~~~~~i~~~L~~y 99 (157)
T 2e9h_A 72 TQFDVKN-DRYIVNGS-HEANKLQDMLDGF 99 (157)
T ss_dssp EEEETTT-TEEEEEBC-CCHHHHHHHHHHH
T ss_pred eeecCCC-CEEEEEee-eCHHHHHHHHHHH
Confidence 3566434 79999998 9999999988863
No 69
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=22.15 E-value=75 Score=22.50 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=22.9
Q ss_pred EEecCCCCCeEEEEecccCHHHHHHHHHhc
Q 041984 52 VALKGDDRSQIEVTGDGMDPVLLTSLLRKT 81 (98)
Q Consensus 52 V~id~~~k~kvtV~G~~vDp~~lv~kLrKk 81 (98)
..+|.++ +++.|.|. .++..|-+.|++.
T Consensus 65 g~id~~~-~rliinG~-~~~~~i~~~L~~y 92 (170)
T 2g2k_A 65 TQFDVKN-DRYIVNGS-HEANKLQDMLDGF 92 (170)
T ss_dssp CEECTTT-CCEEEEBC-CCHHHHHHHHHHH
T ss_pred eeecCCC-CEEEEEee-eCHHHHHHHHHHH
Confidence 3577644 79999998 9999999998863
No 70
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=21.49 E-value=56 Score=24.02 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=18.8
Q ss_pred eEEEEecccCHHHHHHHHHhcCC
Q 041984 61 QIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 61 kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.+.|+|+ +|+..+.+.+++.++
T Consensus 190 ~l~v~Gd-~~~~~~~~~i~~~f~ 211 (443)
T 1hr6_B 190 VLAGAGA-VDHEKLVQYAQKYFG 211 (443)
T ss_dssp EEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEcC-CCHHHHHHHHHHHhc
Confidence 7889998 999999999987654
No 71
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=21.47 E-value=44 Score=23.43 Aligned_cols=37 Identities=14% Similarity=0.005 Sum_probs=24.2
Q ss_pred CCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 45 RVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 45 ~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
.-+||.|-.+|... |+|+|.-+.=.+.. ..+|.+..|
T Consensus 112 ~~~~v~~W~VD~~t-N~VVV~a~~~~~~a-a~~f~~~AG 148 (166)
T 3pro_C 112 PLDGVQSWYVDPRS-NAVVVKVDDGATDA-GVDFVALSG 148 (166)
T ss_dssp -CTTEEEEEEEGGG-TEEEEEEETTCHHH-HHHHHHHHT
T ss_pred CCCCCceEEEeCCC-CeEEEEeCCCChHH-HHHHHHHhC
Confidence 45678899999987 89999886222333 355554444
No 72
>3v2d_I 50S ribosomal protein L9; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2j03_I 2jl6_I 2jl8_I 2v47_I 2v49_I 2wdi_I 2wdj_I 2wdl_I 2wdn_I 2wh2_I 2x9s_I 2x9u_I 2xg0_I 2xg2_I 3hux_I 3huz_I 3i8f_K 3i8i_K 3i9c_K 3i9e_K ...
Probab=20.04 E-value=69 Score=21.90 Aligned_cols=45 Identities=7% Similarity=0.163 Sum_probs=34.2
Q ss_pred HHHHHHHhcCCCceeEEEecCCCCCeEEEEecccCHHHHHHHHHhcCC
Q 041984 36 RSKALKIAVRVSGVESVALKGDDRSQIEVTGDGMDPVLLTSLLRKTMR 83 (98)
Q Consensus 36 ~~Kv~k~i~~~~GV~SV~id~~~k~kvtV~G~~vDp~~lv~kLrKk~~ 83 (98)
...|.....+++|.. +++..+..+. ..-|. |.+.++.+.|++..|
T Consensus 62 ~~~A~~~~~~L~~~~-v~i~~kag~~-kLfGS-Vt~~dIa~al~~~~g 106 (148)
T 3v2d_I 62 KAEAERLKEILENLT-LTIPVRAGET-KIYGS-VTAKDIAEALSRQHG 106 (148)
T ss_dssp HHHHHHHHHHSSSCC-EEEECCBSSS-SBSSC-BCHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHcCCE-EEEEEEcCCC-ccccc-cCHHHHHHHHHHhcC
Confidence 445667777888874 7776665555 77897 999999999998644
Done!