BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041992
(473 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis
thaliana GN=At3g51120 PE=2 SV=3
Length = 1292
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 179/298 (60%), Gaps = 32/298 (10%)
Query: 33 VQLMCVDQCDGIQEMDDLQLVGAPEDPCIKDDDGAVRQDRGMVDVEVKLAETGTAMSRVK 92
+ LM VDQC+ I ++ + + P GAV + EVK+ + +K
Sbjct: 29 IDLMRVDQCEEIG-VNQVPALSVPASTVA----GAVAVPMSN-EQEVKVIDEAAP---IK 79
Query: 93 QKAGRRPPRGGKVKTTARQPPPGRRKTEEED-------VCFICFDGGSLVLCDRKGCPKA 145
+K GR PPR A P R VCFICFDGG LVLCDR+ CPKA
Sbjct: 80 RKRGR-PPRA-----QANTPLHIRPPPPPPKKEDKEEDVCFICFDGGDLVLCDRRNCPKA 133
Query: 146 YHPACIKREESFFRSKAKWNCGWHICSICEKASYYMCYTCTYSLCKGCTKGADYYSLRGN 205
YHPACIKR+E+FFR+ AKWNCGWHIC C+KAS YMCYTCT+S+CK C K ADY +RGN
Sbjct: 134 YHPACIKRDEAFFRTTAKWNCGWHICGTCQKASSYMCYTCTFSVCKRCIKDADYVIVRGN 193
Query: 206 KGFCGICMRTIMLIENCAPGNQEKVVVDFDDKTSWEYLFKVYWIFLKEKLSLTLDELTGA 265
G CG C++ IMLIEN A G+ E V VDFDDK SWEYLFKVYW+ LKE+LSLT+DELT A
Sbjct: 194 MGLCGTCIKPIMLIENIAQGDNEAVKVDFDDKLSWEYLFKVYWLCLKEELSLTVDELTRA 253
Query: 266 KNPWKEPAITAPKGKSSCQVYNGDCSRGLSSENFCGDLDANHAKRRKTKKQAEFPNQL 323
NPWKE TAPK +S N N D+ N KRR+T PN+L
Sbjct: 254 NNPWKEVPNTAPKVESQNDHTN----------NRALDVAVNGTKRRRTSDSPTLPNKL 301
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 77/98 (78%)
Query: 340 IKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFI 399
+ GTSK Y++G +T DV+LEI NL K+EV++ID +S+Q +EDEC RLRQSIKCG
Sbjct: 507 VVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITEDECKRLRQSIKCGLN 566
Query: 400 KHLTVGEIQEKAMSLQALRVNDLLESEILRLNNLRDRA 437
K LTV +I + A +LQA+R+N+ LE+EIL+LN+LRDRA
Sbjct: 567 KRLTVVDILKTAATLQAMRINEALEAEILKLNHLRDRA 604
>sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis
thaliana GN=NERD PE=1 SV=3
Length = 1773
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 136/199 (68%), Gaps = 14/199 (7%)
Query: 121 EEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKASYY 180
EEDVCF+CFDGG LVLCDR+GC KAYHP+C+ R+E+FF++K KWNCGWH+CS CEK + Y
Sbjct: 598 EEDVCFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFFQTKGKWNCGWHLCSKCEKTATY 657
Query: 181 MCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIMLIENCAPGNQEKVVVDFDDKTSW 240
+CYTC +SLCKGC K A ++ +RGNKG C CM T+ LIE +E +DF+DKTSW
Sbjct: 658 LCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIERKQQ-EKEPAQLDFNDKTSW 716
Query: 241 EYLFKVYWIFLKEKLSLTLDELTGAKNPWKEPAITAPK-GKSSCQVYNGDCSRGLSSENF 299
EYLFK YWI LK +LSL+ +EL AK P K A K G +S Y D
Sbjct: 717 EYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASETDYVTD---------- 766
Query: 300 CGDLDANHA-KRRKTKKQA 317
G D++ + K+RKT+ ++
Sbjct: 767 -GGSDSDSSPKKRKTRSRS 784
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Query: 340 IKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFI 399
+ GTSK +PYK+G +T D +LEI NL K EV++ID ISNQ+F+EDEC RL+QSIKCG I
Sbjct: 997 VVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFTEDECKRLKQSIKCGLI 1056
Query: 400 KHLTVGEIQEKAMSLQALRVNDLLESEILRLNNLRDRASEKGHRKEYPLFLWNSTFYCYL 459
LTVG+IQEKA++LQ +RV +LLE+EILR ++LRDRAS+ G RKEYP L S L
Sbjct: 1057 NRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMGRRKEYPYLLKLSNSLTML 1116
Query: 460 IF-PCLRDISALKC 472
C+ + LK
Sbjct: 1117 TLRECVEKLQLLKS 1130
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1
SV=2
Length = 1365
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 115 GRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
G+R++E+E CF C DGG LVLCDRK C KAYH +C+ + F KW C WH C +C
Sbjct: 1234 GKRQSEDE--CFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF---GKWECPWHHCDVC 1288
Query: 175 EKASYYMCYTCTYSLCKGCTKGADYYSLRGNKGFC 209
K S C+ C S CK G + S + + +C
Sbjct: 1289 GKPSTSFCHLCPNSFCKEHQDGTAFRSTQDGQSYC 1323
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 108 TARQPPPGRRKTEEEDV--CFICFDGGSLVLCDRKGCPKAYHPACIKRE 154
TAR+ G+R +V CF+C GGSL+ C+ CP A+HP C+ E
Sbjct: 818 TARK---GKRHHTHVNVSWCFVCSKGGSLLCCE--ACPAAFHPDCLNIE 861
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 73 GMVDVEVKLAETGTAMSRVKQKAGRRPPRGGKVKTTARQPPPGRRKTEEEDVCFICFDGG 132
G + V K A T + K ++ R K+KT +Q ED CF C DGG
Sbjct: 1282 GFLGVRPKSACASTNEEKAKNAKLKQKRR--KIKTEPKQ--------MHEDYCFQCGDGG 1331
Query: 133 SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKASYYMCYTCTYSLCKG 192
LV+CD+K CPKAYH C+ + + KW C WH C C A+ C C +S CK
Sbjct: 1332 ELVMCDKKDCPKAYHLLCLNLTQPPY---GKWECPWHQCDECSSAAVSFCEFCPHSFCKD 1388
Query: 193 CTKGA 197
KGA
Sbjct: 1389 HEKGA 1393
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 52/156 (33%), Gaps = 44/156 (28%)
Query: 125 CFIC-FDGGSLVLCDRKGCPKAYHPACIKR-EESFFRSKAKWNCGWHICSIC-------- 174
CF C G + C C K YH AC+++ + F SK + C H CS C
Sbjct: 752 CFSCKVSGKDVKRCSVGACGKFYHEACVRKFPTAIFESKG-FRCPQHCCSACSMEKDIHK 810
Query: 175 -EKASYYMCYTCTYSLCKG-----------------CTKGADYYSLRG--NKGFCGICMR 214
K C C + G C+ + S N GFC +C R
Sbjct: 811 ASKGRMMRCLRCPVAYHSGDACIAAGSMLVSSYILICSNHSKRSSNSSAVNVGFCFVCAR 870
Query: 215 TIMLIENCAPGNQEKVVVDFDDKTSWEYLFKVYWIF 250
+ +V D D Y +K +++
Sbjct: 871 GL-------------IVQDHSDPMFSSYAYKSHYLL 893
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1
SV=1
Length = 1365
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 115 GRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
G+R++E+E CF C DGG LVLCDRK C KAYH +C+ + F KW C WH C +C
Sbjct: 1234 GKRQSEDE--CFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPF---GKWECPWHHCDVC 1288
Query: 175 EKASYYMCYTCTYSLCKGCTKGADYYSLRGNKGFC 209
K S C+ C S CK G + + +C
Sbjct: 1289 GKPSTSFCHLCPNSFCKEHQDGTAFSCTPDGRSYC 1323
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Query: 108 TARQPPPGRRKTEEEDV--CFICFDGGSLVLCDRKGCPKAYHPACIKRE 154
TAR+ G+R +V CF+C GGSL+ C+ CP A+HP C+ E
Sbjct: 818 TARK---GKRHHAHVNVSWCFVCSKGGSLLCCE--SCPAAFHPDCLNIE 861
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKASYYM 181
ED CF C DGG LV+CD+K CPKAYH C+ + KW C WH C C +
Sbjct: 1323 EDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQP---PHGKWECPWHRCDECGSVAVSF 1379
Query: 182 CYTCTYSLCKGCTKGA 197
C C +S CK KGA
Sbjct: 1380 CEFCPHSFCKAHGKGA 1395
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 52/156 (33%), Gaps = 44/156 (28%)
Query: 125 CFIC-FDGGSLVLCDRKGCPKAYHPACIKR-EESFFRSKAKWNCGWHICSIC-------- 174
CF C G + C C K YH AC+++ + F SK + C H CS C
Sbjct: 752 CFSCKVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFESKG-FRCPQHCCSSCSMEKDIHK 810
Query: 175 -EKASYYMCYTC--TYSLCKGCTKGADY-----------YSLRG------NKGFCGICMR 214
K C C Y + C +S R N GFC +C R
Sbjct: 811 ASKGRMMRCLRCPVAYHVGDACVAAGSVSVSSHILICSNHSKRSSQSAAINVGFCFVCAR 870
Query: 215 TIMLIENCAPGNQEKVVVDFDDKTSWEYLFKVYWIF 250
+ +V D D Y +K +++
Sbjct: 871 GL-------------IVQDHSDPMFSSYAYKSHYLL 893
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 113 PPGRRKT------EEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
P G+R++ E ED CF C D G LV C + GCPK YH C+ + R KW C
Sbjct: 2001 PHGKRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTK---RPAGKWEC 2057
Query: 167 GWHICSICEKASYYMCYTCTYSLCKGCTKGADYYS 201
WH C +C K + C C S CK +G + S
Sbjct: 2058 PWHQCDVCGKEAASFCEMCPSSFCKQHREGMLFIS 2092
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPACI 151
CF+C +GGSL+ CD CP A+H C+
Sbjct: 1608 CFVCSEGGSLLCCD--SCPAAFHRECL 1632
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 124 VCFICFDGGSLV-LCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS 178
CF+C G V C C K YH C+++ + C HIC C A+
Sbjct: 1490 TCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVTQNKGFRCPLHICITCHAAN 1545
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 115 GRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
G E ED CF C D G LV C + GCPK YH C+ + R KW C WH C IC
Sbjct: 2111 GEITKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTK---RPAGKWECPWHQCDIC 2167
Query: 175 EKASYYMCYTCTYSLCKGCTKGADYYS 201
K + C C S CK +G + S
Sbjct: 2168 GKEAASFCEMCPSSFCKQHREGMLFIS 2194
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPACI 151
CF+C +GGSL+ CD CP A+H C+
Sbjct: 1710 CFVCSEGGSLLCCD--SCPAAFHRECL 1734
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 124 VCFICFDGGSLV-LCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS 178
CF+C G V C C K YH C+++ + C HIC C A+
Sbjct: 1592 TCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAAN 1647
>sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430 OS=Arabidopsis thaliana
GN=At5g08430 PE=1 SV=2
Length = 553
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 356 TADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEKAMSLQ 415
T D +L++ N K V+I +S+ FS++EC L Q IK G +K T+ E++EKA L
Sbjct: 214 TDDFLLQVTNYVKD--VSISVLSDDNFSQEECEDLHQRIKNGLLKKPTIVEMEEKAKKLH 271
Query: 416 ALRVNDLLESEILRLNNLRDRASEKGHRKEYPLFL 450
+ L EI L L DRA+EKG R+E +L
Sbjct: 272 KDQTKHWLGREIELLKRLIDRANEKGWRRELSEYL 306
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66
PE=2 SV=4
Length = 1216
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 91 VKQKAGRRPPR-GGKVKTTARQPP--PGRRK-----TEEEDVCFICFDGGSLVLCDRKGC 142
V AG+RPP G R P PG +K E ED C +C +GG L+ CDR C
Sbjct: 931 VTSLAGQRPPEVEGTSPEEHRLIPRTPGAKKGPPAPIENEDFCAVCLNGGELLCCDR--C 988
Query: 143 PKAYHPAC 150
PK +H +C
Sbjct: 989 PKVFHLSC 996
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
Query: 114 PGRRKT-----EEEDVCFICFDGGSLVLCDRKGCPKAYHPAC 150
PG +K E ED C +C +GG L+ CDR CPK YH +C
Sbjct: 983 PGAKKNTPAPIENEDFCAVCINGGELLCCDR--CPKVYHLSC 1022
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACI 151
ED C +C DGG L+ CD GCP+A+H AC+
Sbjct: 298 EDECAVCHDGGELICCD--GCPRAFHLACL 325
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
+T+ +D C +C GG ++LCD CP+AYH C+ E + KW+C
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDT--CPRAYHLVCLDPELE-KAPEGKWSC 384
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 123 DVCFICFDGGSLVLCDRKGCPKAYHPACI 151
+ C +C DGG L+ CD CP +YH C+
Sbjct: 417 EFCRVCKDGGELLCCD--ACPSSYHLHCL 443
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
+T+ +D C +C GG ++LCD CP+AYH C+ E + KW+C
Sbjct: 375 ETDHQDYCEVCQQGGEIILCDT--CPRAYHLVCLDPELD-RAPEGKWSC 420
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
ED C +C DGG L+ CD GCP+A+H AC+ S W C
Sbjct: 296 EDECAVCRDGGELICCD--GCPRAFHLACLSPPLREIPS-GTWRC 337
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 120 EEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
E +D C +C GG ++LCD CP+AYH C++ E + KW+C
Sbjct: 375 EHQDYCEVCQQGGEIILCD--TCPRAYHLVCLEPELD-EPPEGKWSC 418
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACI 151
++ C +C DGG L+ CD CP AYH C+
Sbjct: 437 QEFCRVCKDGGELLCCD--SCPSAYHTFCL 464
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
+T+ +D C +C GG ++LCD CP+AYH C+ + + KW+C
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDT--CPRAYHMVCLDPDME-KAPEGKWSC 411
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
Query: 120 EEED-----VCFICFDGGSLVLCDRKGCPKAYHPACI 151
EEED C +C DGG L+ CD CP +YH C+
Sbjct: 442 EEEDDHHMEFCRVCKDGGELLCCDT--CPSSYHIHCL 476
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC 166
+T+ +D C +C GG ++LCD CP+AYH C+ + + KW+C
Sbjct: 359 ETDHQDYCEVCQQGGEIILCDT--CPRAYHMVCLDPDME-KAPEGKWSC 404
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
Query: 120 EEED-----VCFICFDGGSLVLCDRKGCPKAYHPACI 151
EEED C +C DGG L+ CD CP +YH C+
Sbjct: 435 EEEDDHHMEFCRVCKDGGELLCCDT--CPSSYHIHCL 469
>sp|Q92541|RTF1_HUMAN RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens
GN=RTF1 PE=1 SV=4
Length = 710
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 330 NSGRVKGMPLIKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSR 389
NS V + I G + K Y++G + L++R+ + V ++ +SNQEF+E E +
Sbjct: 395 NSKPVYRVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMK 454
Query: 390 LRQSIKCGFIKHLTVGEIQEKAMSLQ 415
++++ ++ T+ EI +K +S++
Sbjct: 455 WKEAMFSAGMQLPTLDEINKKELSIK 480
>sp|Q5RAD5|RTF1_PONAB RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo
abelii GN=RTF1 PE=2 SV=2
Length = 665
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 330 NSGRVKGMPLIKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSR 389
NS V + I G + K Y++G + L++R+ + V ++ +SNQEF+E E +
Sbjct: 390 NSKPVYRVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMK 449
Query: 390 LRQSIKCGFIKHLTVGEIQEKAMSL-QAL--RVNDLLESEILR 429
++++ ++ T+ EI +K +S+ +AL + ND EI++
Sbjct: 450 WKEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVK 492
>sp|A2AQ19|RTF1_MOUSE RNA polymerase-associated protein RTF1 homolog OS=Mus musculus
GN=Rtf1 PE=2 SV=1
Length = 715
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 330 NSGRVKGMPLIKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSR 389
NS V + I G + K Y++G + L++R+ + V ++ +SNQEF+E E +
Sbjct: 400 NSKPVYRVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMK 459
Query: 390 LRQSIKCGFIKHLTVGEIQEKAMSLQ 415
++++ ++ T+ EI +K +S++
Sbjct: 460 WKEAMFSAGMQLPTLDEINKKELSIK 485
>sp|Q5I0J8|PH11L_RAT PHD finger protein 11-like OS=Rattus norvegicus GN=Phf11l PE=2 SV=1
Length = 293
Score = 39.3 bits (90), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 97 RRPPRGGKVKTTARQPPPGRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREES 156
R P R VK+ ++ GRR C C + G+ V CD + CPK YH C K + +
Sbjct: 70 RNPARSFAVKSVKKEIWRGRRLK-----CSFCNNKGATVGCDLQSCPKNYHLHCAKEDRA 124
Query: 157 FFR 159
+
Sbjct: 125 ILQ 127
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACI 151
++K +E+ C +C DGG L+ CD CP YH C+
Sbjct: 29 KQKFRDEEYCKVCSDGGDLLCCD--SCPSVYHRTCL 62
>sp|Q949T8|ASHR3_ARATH Histone-lysine N-methyltransferase ASHR3 OS=Arabidopsis thaliana
GN=ASHR3 PE=1 SV=1
Length = 497
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 115 GRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
G +K + VC G + C +GC AYH C K F +S +K+ C H C +C
Sbjct: 114 GAKKMVDCLVCHKPVYPGEDLSCSVRGCQGAYHSLCAKESLGFSKS-SKFKCPQHECFVC 172
Query: 175 EKASYYMCYTCTYS 188
++ + + C C +
Sbjct: 173 KQRTQWRCVKCPMA 186
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 101 RGGKVKTTARQPPPGRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPAC 150
RGG + Q G+ ED C +C +GG L+ CD CPK +H C
Sbjct: 901 RGGATNANS-QTTAGKEDDPNEDWCAVCQNGGELLCCDH--CPKVFHITC 947
>sp|Q5I0E2|PHF11_RAT PHD finger protein 11 OS=Rattus norvegicus GN=Phf11 PE=2 SV=1
Length = 336
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 97 RRPPRGGKVKTTARQPPPGRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREES 156
R P R VK+ ++ GRR C +C GG+ V CD C K+YH C K++ +
Sbjct: 70 RNPARSFAVKSVKKEIWRGRRLK-----CSLCNKGGATVGCDLSSCRKSYHYVCAKKDHA 124
Query: 157 F 157
Sbjct: 125 I 125
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 82 AETGTAMSRVKQKAGRRPPRGGKVKTTARQPPPGRRKT-----EEEDVCFICFDGGSLVL 136
AE G +R+ + A + R +++ AR R++ ++ C +C G L+L
Sbjct: 221 AEKGKEEARINRAAAKVDKRKAALES-ARASKRARKEQGVVEENHQENCEVCNQDGELML 279
Query: 137 CDRKGCPKAYHPACI 151
CD C +AYH ACI
Sbjct: 280 CD--TCTRAYHVACI 292
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 123 DVCFICFDGGSLVLCDRKGCPKAYHPACI 151
D C IC + +++LCD CP +YH CI
Sbjct: 329 DYCRICKETSNILLCD--TCPSSYHAYCI 355
>sp|Q9UMN6|MLL4_HUMAN Histone-lysine N-methyltransferase MLL4 OS=Homo sapiens GN=WBP7 PE=1
SV=1
Length = 2715
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 125 CFICFDGG----SLVLCDRKGCPKAYHPACI--KREESFFRSKAKWNCGWHI----CSIC 174
C +C G L+ C+R C AYHPAC+ R + W C + C
Sbjct: 1252 CHVCGRKGRGSKHLLECER--CRHAYHPACLGPSYPTRATRKRRHWICSACVRCKSCGAT 1309
Query: 175 EKASYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214
++ + ++ YSLC CT+ Y +GN +C IC R
Sbjct: 1310 PGKNWDVEWSGDYSLCPRCTQ---LYE-KGN--YCPICTR 1343
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACI 151
+ E D C C G L+LCD CP+AYH CI
Sbjct: 252 EAENNDYCEECKQDGELLLCD--TCPRAYHTVCI 283
>sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1
SV=3
Length = 2713
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 125 CFICFDGG----SLVLCDRKGCPKAYHPACI--KREESFFRSKAKWNCGWHI----CSIC 174
C +C G L+ C+R C AYHPAC+ R + W C + C
Sbjct: 1258 CHVCGRKGRGSKHLLECER--CRHAYHPACLGPSYPTRATRRRRHWICSACVRCKSCGAT 1315
Query: 175 EKASYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214
++ + ++ YSLC CT + Y +GN +C IC R
Sbjct: 1316 PGKNWDVEWSGDYSLCPRCT---ELYE-KGN--YCPICTR 1349
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKASY-- 179
ED C +C +GG L+ C++ CPK +H +C + F S +W IC+ C S
Sbjct: 826 EDWCAVCQNGGELLCCEK--CPKVFHLSCHVPTLTNFPS-GEW-----ICTFCRDLSKPE 877
Query: 180 --YMCYTCTYSLCKGCTKG 196
Y C +++ K T+G
Sbjct: 878 VEYDCDAPSHNSEKKKTEG 896
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS 178
ED C +C +GG L+ C++ CPK +H C + F S +W IC+ C S
Sbjct: 827 EDWCAVCQNGGELLCCEK--CPKVFHLTCHVPTLTNFPS-GEW-----ICTFCRDLS 875
>sp|Q9UPZ9|ICK_HUMAN Serine/threonine-protein kinase ICK OS=Homo sapiens GN=ICK PE=1
SV=1
Length = 632
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 351 KIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEK 410
++GD T +L R+++ E++AI + + +S +EC LR+ + H V +++E
Sbjct: 9 QLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANVVKLKE- 67
Query: 411 AMSLQALRVNDLL 423
+R ND L
Sbjct: 68 -----VIRENDHL 75
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 33.5 bits (75), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH-ICSICEK 176
C +C G+ C+R CP YH AC R + F C H I CE+
Sbjct: 5092 CSLCQRTGATSSCNRMRCPNVYHFACAIRAKCMFFKDKTMLCPMHKIKGPCEQ 5144
Score = 33.5 bits (75), Expect = 3.7, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 29/128 (22%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKA-KWNCGWHI----------CSI 173
C C G+ + C GCP+ YH C SF K + C H C++
Sbjct: 172 CSHCTRLGASIPCRSPGCPRLYHFPCATASGSFLSMKTLQLLCPEHSEGAAYLEEARCAV 231
Query: 174 CEK----ASYYMCYTCTYSLCKGCTKGADYYSLRGNKGF----CGICMRTIMLIENC-AP 224
CE + C +C + C A + R G+ C +C + C P
Sbjct: 232 CEGPGELCDLFFCTSCGHHYHGACLDTA--LTARKRAGWQCPECKVC-------QACRKP 282
Query: 225 GNQEKVVV 232
GN K++V
Sbjct: 283 GNDSKMLV 290
>sp|A6H5X4|PH11L_MOUSE PHD finger protein 11-like OS=Mus musculus GN=Phf11l PE=2 SV=1
Length = 337
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 97 RRPPRGGKVKTTARQPPPGRRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREES 156
R R VK+ ++ GRR C C GG+ V CD C K+YH C K++++
Sbjct: 70 RNTIRNFDVKSVKKEIWRGRRLK-----CSFCNKGGATVGCDLWFCKKSYHYVCAKKDQA 124
Query: 157 FFR 159
+
Sbjct: 125 ILQ 127
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
ED C +C +GG L+ C++ CPK +H C + + G IC+ C
Sbjct: 850 EDWCAVCQNGGDLLCCEK--CPKVFHLTC------HVPTLLSFPSGEWICTFC 894
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 120 EEEDVCFICFDGGSLVLCDRKGCPKAYHPACI 151
E ED C C GS + CD CPK++H C+
Sbjct: 258 ENEDFCSACNQSGSFLCCD--TCPKSFHFLCL 287
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 33.1 bits (74), Expect = 5.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH-ICSICEK 176
C +C G+ C+R CP YH AC R + F C H I CE+
Sbjct: 5143 CSLCQRTGATSSCNRMRCPNVYHFACAIRAKCMFFKDKTMLCPVHKIKGPCEQ 5195
>sp|Q62726|ICK_RAT Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick
PE=1 SV=1
Length = 629
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 351 KIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEK 410
++GD T +L R+++ E++AI + + +S +EC LR+ + H + +++E
Sbjct: 9 QLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKE- 67
Query: 411 AMSLQALRVNDLL 423
+R ND L
Sbjct: 68 -----VIRENDHL 75
>sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica
GN=CDKF-4 PE=2 SV=1
Length = 459
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 351 KIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEK 410
++GD T + N Q EVVA+ + + +S +EC LR+ + H + +++E
Sbjct: 9 EVGDGTFGSVWRAINKQNGEVVAVKKMKRKYYSFEECMSLREVKSLRRMNHPNIVKLKE- 67
Query: 411 AMSLQALRVNDLL 423
+R ND+L
Sbjct: 68 -----VIRENDIL 75
>sp|Q9JKV2|ICK_MOUSE Serine/threonine-protein kinase ICK OS=Mus musculus GN=Ick PE=2
SV=2
Length = 629
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 351 KIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEK 410
++GD T +L R+++ E++AI + + +S +EC LR+ + H + +++E
Sbjct: 9 QLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKE- 67
Query: 411 AMSLQALRVNDLL 423
+R ND L
Sbjct: 68 -----VIRENDHL 75
>sp|Q55FD6|Y8158_DICDI PHD finger-containing protein DDB_G0268158 OS=Dictyostelium
discoideum GN=DDB_G0268158 PE=4 SV=1
Length = 688
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 122 EDVCFIC----FDGGSLVLCDRKGCPKAYHPACI---KREESFFRSKAKWNCGWHICSIC 174
++ CF C G L+ C C K YH C+ K + ++NC H CS+C
Sbjct: 198 QNSCFSCKKRGIIGIDLMKCKVHQCGKFYHYKCVADYKLAKLINTKTPRFNCPLHYCSVC 257
Query: 175 E 175
E
Sbjct: 258 E 258
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
ED C +C +GG L+ C++ CPK +H C + + G IC+ C
Sbjct: 902 EDWCAVCQNGGDLLCCEK--CPKVFHLTC------HVPTLLSFPSGDWICTFC 946
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 122 EDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSIC 174
ED C +C +GG L+ C++ CPK +H C + + G IC+ C
Sbjct: 887 EDWCAVCQNGGDLLCCEK--CPKVFHLTC------HVPTLLSFPSGDWICTFC 931
>sp|Q8MT36|MES4_DROME Probable histone-lysine N-methyltransferase Mes-4 OS=Drosophila
melanogaster GN=Mes-4 PE=1 SV=2
Length = 1427
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 125 CFICFDGGSLVLCDRKGCPKAYHPAC----IKREESFF 158
C+IC GG LV C+ CP A H C IK ES+
Sbjct: 1002 CYICVKGGELVCCE--TCPIAVHAHCRNIPIKTNESYI 1037
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 81 LAETGTAMSRVKQKAGRRPPRGGKVKTTARQPPPGRRKT---EEEDVCFICFDGGSLVLC 137
L +G M +++ A PP+ + + +R+P R++ D C C +GG L+ C
Sbjct: 14 LDTSGGLMEQIQ--ALLAPPKTDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGGDLLCC 71
Query: 138 DRKGCPKAYHPACIKREES-FFRSKAKWNCGWHICSI 173
D CP A+H C S +W C H C++
Sbjct: 72 DH--CPAAFHLQCCNPPLSEEMLPPGEWMC--HRCTV 104
>sp|Q84SN3|CDKF3_ORYSJ Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica
GN=CDKF-3 PE=2 SV=1
Length = 433
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 351 KIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEK 410
+IGD T + N + E+VA+ + + F +EC LR+ + H + +++E
Sbjct: 9 EIGDGTCGNVFRAYNTETNEIVAVKKMKRKFFQWEECISLREVKALQKLNHPNIVKLKEV 68
Query: 411 AM 412
M
Sbjct: 69 TM 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,718,713
Number of Sequences: 539616
Number of extensions: 8236603
Number of successful extensions: 19753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 19643
Number of HSP's gapped (non-prelim): 137
length of query: 473
length of database: 191,569,459
effective HSP length: 121
effective length of query: 352
effective length of database: 126,275,923
effective search space: 44449124896
effective search space used: 44449124896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)