Query 041992
Match_columns 473
No_of_seqs 240 out of 831
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 22:20:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gne_A Histone-lysine N-methyl 99.8 4.1E-20 1.4E-24 159.9 6.3 91 116-210 9-99 (107)
2 2ysm_A Myeloid/lymphoid or mix 99.7 1.6E-18 5.6E-23 148.2 5.2 93 118-214 3-103 (111)
3 2kwj_A Zinc finger protein DPF 99.6 6.7E-17 2.3E-21 139.8 1.4 91 123-216 2-109 (114)
4 2bze_A KIAA0252 protein; human 99.6 8.7E-16 3E-20 139.8 7.5 82 337-418 71-152 (153)
5 3v43_A Histone acetyltransfera 99.6 2.5E-16 8.6E-21 135.6 2.5 92 120-214 3-111 (112)
6 3u1u_A RNA polymerase-associat 99.5 4.2E-15 1.4E-19 132.8 5.7 80 337-416 57-136 (137)
7 1mm2_A MI2-beta; PHD, zinc fin 99.2 4.7E-12 1.6E-16 98.8 4.6 54 116-172 3-56 (61)
8 3u5n_A E3 ubiquitin-protein li 99.2 2.7E-12 9.3E-17 120.4 1.8 124 118-261 3-127 (207)
9 1xwh_A Autoimmune regulator; P 99.2 7.6E-12 2.6E-16 98.8 2.4 49 118-169 4-52 (66)
10 2puy_A PHD finger protein 21A; 99.1 9.7E-12 3.3E-16 96.2 2.2 49 119-170 2-50 (60)
11 2yql_A PHD finger protein 21A; 99.1 1.3E-11 4.6E-16 94.4 2.7 50 117-169 4-53 (56)
12 1fp0_A KAP-1 corepressor; PHD 99.1 2.8E-11 9.5E-16 101.7 4.6 52 116-170 19-70 (88)
13 2l5u_A Chromodomain-helicase-D 99.1 1.9E-11 6.4E-16 95.4 2.9 51 116-169 5-55 (61)
14 3o36_A Transcription intermedi 99.1 5.1E-11 1.7E-15 109.6 3.6 47 120-169 2-48 (184)
15 2lri_C Autoimmune regulator; Z 99.0 7.1E-11 2.4E-15 93.9 2.6 47 120-169 10-56 (66)
16 2l43_A N-teminal domain from h 98.9 3.2E-10 1.1E-14 94.6 2.5 50 117-171 20-74 (88)
17 2ro1_A Transcription intermedi 98.9 4.9E-10 1.7E-14 104.5 3.8 49 121-172 1-49 (189)
18 2e6r_A Jumonji/ARID domain-con 98.9 4.3E-10 1.5E-14 94.4 2.1 58 117-177 11-71 (92)
19 1f62_A Transcription factor WS 98.8 9.1E-10 3.1E-14 82.2 2.1 43 124-169 2-47 (51)
20 2lbm_A Transcriptional regulat 98.8 1E-09 3.5E-14 99.3 1.9 54 116-171 57-116 (142)
21 2ku3_A Bromodomain-containing 98.8 7.6E-10 2.6E-14 89.1 0.9 48 118-170 12-64 (71)
22 2yt5_A Metal-response element- 98.8 7.6E-10 2.6E-14 86.5 0.8 50 119-170 3-59 (66)
23 1wev_A Riken cDNA 1110020M19; 98.7 1.8E-09 6.3E-14 89.8 0.8 50 119-170 13-70 (88)
24 2e6s_A E3 ubiquitin-protein li 98.7 5.4E-09 1.8E-13 85.4 3.4 46 121-169 25-74 (77)
25 3asl_A E3 ubiquitin-protein li 98.7 7.1E-09 2.4E-13 83.0 3.1 44 124-170 20-67 (70)
26 3asl_A E3 ubiquitin-protein li 98.6 2.5E-08 8.6E-13 79.9 4.5 53 161-214 11-68 (70)
27 3ql9_A Transcriptional regulat 98.6 6.4E-09 2.2E-13 92.8 0.4 54 116-171 51-110 (129)
28 3shb_A E3 ubiquitin-protein li 98.6 3.2E-08 1.1E-12 80.9 4.0 53 161-214 19-76 (77)
29 2e6s_A E3 ubiquitin-protein li 98.5 6.6E-08 2.3E-12 78.9 4.5 52 162-214 20-76 (77)
30 1wen_A Inhibitor of growth fam 98.4 1.5E-07 5.1E-12 75.7 4.8 48 119-170 13-63 (71)
31 3v43_A Histone acetyltransfera 98.4 8.9E-08 3E-12 82.3 3.4 43 124-169 63-109 (112)
32 2k16_A Transcription initiatio 98.4 5.3E-08 1.8E-12 77.9 1.7 49 118-169 14-65 (75)
33 3ask_A E3 ubiquitin-protein li 98.4 7.4E-08 2.5E-12 93.0 2.6 46 122-170 174-223 (226)
34 1weu_A Inhibitor of growth fam 98.4 5.7E-07 1.9E-11 75.9 7.5 47 120-170 34-83 (91)
35 3shb_A E3 ubiquitin-protein li 98.4 1.2E-07 4.1E-12 77.5 3.2 43 124-169 28-74 (77)
36 2ysm_A Myeloid/lymphoid or mix 98.4 9.8E-08 3.3E-12 81.3 2.6 48 124-176 56-106 (111)
37 2kwj_A Zinc finger protein DPF 98.4 7.6E-08 2.6E-12 83.1 1.8 43 124-169 60-105 (114)
38 3c6w_A P28ING5, inhibitor of g 98.4 7.8E-08 2.7E-12 74.7 1.5 46 120-169 7-55 (59)
39 2g6q_A Inhibitor of growth pro 98.3 1E-07 3.6E-12 74.8 1.5 46 120-169 9-57 (62)
40 2vnf_A ING 4, P29ING4, inhibit 98.3 1.1E-07 3.9E-12 73.9 1.5 46 120-169 8-56 (60)
41 2jmi_A Protein YNG1, ING1 homo 98.3 1.6E-07 5.6E-12 79.0 2.5 47 118-168 22-71 (90)
42 3ask_A E3 ubiquitin-protein li 98.3 3E-07 1E-11 88.8 3.5 54 160-214 166-224 (226)
43 3o36_A Transcription intermedi 98.3 1.3E-07 4.4E-12 86.9 0.4 46 170-216 6-52 (184)
44 1mm2_A MI2-beta; PHD, zinc fin 98.1 1.4E-06 4.9E-11 67.7 3.7 45 170-215 11-56 (61)
45 2lri_C Autoimmune regulator; Z 98.1 9.7E-07 3.3E-11 70.1 2.5 45 169-214 13-58 (66)
46 1fp0_A KAP-1 corepressor; PHD 98.1 1.9E-06 6.4E-11 72.4 3.7 54 161-215 17-72 (88)
47 1f62_A Transcription factor WS 98.0 1.4E-06 5E-11 64.8 2.2 44 170-214 2-49 (51)
48 2yql_A PHD finger protein 21A; 98.0 1.1E-06 3.7E-11 67.0 1.4 44 170-214 11-55 (56)
49 2lv9_A Histone-lysine N-methyl 98.0 2.3E-06 7.9E-11 72.3 3.2 41 125-169 33-73 (98)
50 2puy_A PHD finger protein 21A; 98.0 1.2E-06 4.1E-11 67.6 1.2 46 170-216 7-53 (60)
51 2e6r_A Jumonji/ARID domain-con 98.0 2.1E-06 7.1E-11 72.0 2.8 55 160-215 7-66 (92)
52 2l5u_A Chromodomain-helicase-D 98.0 1.8E-06 6.2E-11 67.1 2.0 44 170-214 13-57 (61)
53 1xwh_A Autoimmune regulator; P 98.0 1.6E-06 5.6E-11 68.2 1.8 43 171-214 11-54 (66)
54 3u5n_A E3 ubiquitin-protein li 97.8 8.1E-06 2.8E-10 76.5 3.6 45 170-215 9-54 (207)
55 1x4i_A Inhibitor of growth pro 97.8 6E-06 2E-10 66.2 1.2 46 120-169 4-52 (70)
56 2ro1_A Transcription intermedi 97.8 1.2E-05 4.1E-10 74.9 3.4 45 170-215 4-49 (189)
57 2ri7_A Nucleosome-remodeling f 97.7 3.9E-06 1.3E-10 76.0 -0.9 48 119-169 5-56 (174)
58 1wev_A Riken cDNA 1110020M19; 97.7 9.3E-06 3.2E-10 67.4 0.9 47 169-216 17-73 (88)
59 1we9_A PHD finger family prote 97.6 1.4E-05 4.8E-10 61.9 1.5 49 119-169 3-55 (64)
60 1wil_A KIAA1045 protein; ring 97.6 1.8E-05 6.3E-10 66.3 1.6 53 115-169 8-73 (89)
61 2yt5_A Metal-response element- 97.6 1.7E-05 6E-10 61.6 1.3 44 170-214 8-60 (66)
62 2l43_A N-teminal domain from h 97.4 2.8E-05 9.4E-10 64.7 0.8 43 170-215 27-75 (88)
63 2ku3_A Bromodomain-containing 97.4 3E-05 1E-09 62.3 0.5 42 170-214 18-65 (71)
64 1wew_A DNA-binding family prot 97.3 6.1E-05 2.1E-09 61.0 1.2 49 120-169 14-69 (78)
65 1wep_A PHF8; structural genomi 97.2 0.00011 3.7E-09 59.5 2.0 47 120-169 10-60 (79)
66 2lbm_A Transcriptional regulat 97.1 8.6E-05 2.9E-09 67.2 0.1 46 169-214 64-116 (142)
67 4gne_A Histone-lysine N-methyl 97.0 0.00028 9.5E-09 61.0 2.7 42 170-214 17-61 (107)
68 2xb1_A Pygopus homolog 2, B-ce 97.0 0.00012 4E-09 62.7 0.2 46 123-169 4-58 (105)
69 3o70_A PHD finger protein 13; 97.0 0.00026 9.1E-09 56.2 2.0 46 119-169 16-64 (68)
70 1wee_A PHD finger family prote 96.9 0.00031 1.1E-08 55.8 2.0 47 119-169 13-63 (72)
71 1wem_A Death associated transc 96.9 0.00014 4.7E-09 58.3 -0.4 49 118-169 12-67 (76)
72 2k16_A Transcription initiatio 96.8 0.0004 1.4E-08 55.2 2.1 49 161-215 16-68 (75)
73 4bbq_A Lysine-specific demethy 96.5 0.0012 4E-08 56.3 3.0 85 124-214 9-113 (117)
74 2kgg_A Histone demethylase jar 96.5 0.00049 1.7E-08 51.7 0.6 43 125-169 5-51 (52)
75 2vpb_A Hpygo1, pygopus homolog 96.4 0.00032 1.1E-08 55.4 -1.0 49 120-169 6-63 (65)
76 3kqi_A GRC5, PHD finger protei 96.4 0.0005 1.7E-08 55.1 -0.1 45 122-169 10-58 (75)
77 3kv5_D JMJC domain-containing 96.3 0.00048 1.6E-08 72.8 -0.9 47 120-169 35-85 (488)
78 1wen_A Inhibitor of growth fam 96.3 0.0025 8.4E-08 51.1 3.4 40 173-215 20-65 (71)
79 2rsd_A E3 SUMO-protein ligase 96.2 0.0015 5.2E-08 51.4 1.9 48 121-169 9-62 (68)
80 2lv9_A Histone-lysine N-methyl 96.2 0.0031 1E-07 53.1 3.8 46 167-214 29-75 (98)
81 2ri7_A Nucleosome-remodeling f 96.2 0.00056 1.9E-08 61.8 -1.2 95 160-261 5-119 (174)
82 3ql9_A Transcriptional regulat 96.0 0.001 3.5E-08 59.3 -0.0 46 170-215 59-111 (129)
83 3o7a_A PHD finger protein 13 v 96.0 0.0021 7.3E-08 48.1 1.7 39 127-169 8-49 (52)
84 3a1b_A DNA (cytosine-5)-methyl 96.0 0.0011 3.9E-08 61.0 0.0 51 116-166 73-128 (159)
85 1weu_A Inhibitor of growth fam 95.9 0.0043 1.5E-07 52.2 3.2 34 179-215 49-85 (91)
86 2vnf_A ING 4, P29ING4, inhibit 95.9 0.0014 4.9E-08 50.7 0.1 39 173-214 14-58 (60)
87 3c6w_A P28ING5, inhibitor of g 95.6 0.0022 7.5E-08 49.6 0.1 39 173-214 13-57 (59)
88 2g6q_A Inhibitor of growth pro 95.3 0.0028 9.7E-08 49.5 0.0 39 173-214 15-59 (62)
89 2jmi_A Protein YNG1, ING1 homo 94.9 0.0099 3.4E-07 49.9 2.1 40 173-215 30-76 (90)
90 2pv0_B DNA (cytosine-5)-methyl 94.8 0.0042 1.5E-07 64.1 -0.4 52 116-167 87-143 (386)
91 3kv4_A PHD finger protein 8; e 94.6 0.0033 1.1E-07 65.9 -2.0 43 124-169 7-53 (447)
92 3lqh_A Histone-lysine N-methyl 94.2 0.0079 2.7E-07 56.2 -0.2 45 123-169 3-60 (183)
93 1wil_A KIAA1045 protein; ring 94.0 0.018 6.1E-07 48.4 1.7 52 170-221 17-82 (89)
94 3pur_A Lysine-specific demethy 93.7 0.02 6.9E-07 61.2 1.7 38 131-170 55-92 (528)
95 3a1b_A DNA (cytosine-5)-methyl 91.5 0.02 7E-07 52.7 -1.5 85 120-215 34-134 (159)
96 1we9_A PHD finger family prote 91.5 0.061 2.1E-06 41.3 1.4 49 161-214 4-57 (64)
97 2pv0_B DNA (cytosine-5)-methyl 91.0 0.023 7.9E-07 58.7 -1.9 85 120-215 48-148 (386)
98 2ku7_A MLL1 PHD3-CYP33 RRM chi 89.6 0.088 3E-06 44.1 0.9 37 134-172 2-44 (140)
99 1x4i_A Inhibitor of growth pro 89.4 0.089 3.1E-06 41.9 0.7 49 161-215 4-55 (70)
100 2xb1_A Pygopus homolog 2, B-ce 89.3 0.099 3.4E-06 44.5 0.9 46 170-215 5-61 (105)
101 1wep_A PHF8; structural genomi 87.9 0.18 6.2E-06 40.4 1.6 37 179-215 27-63 (79)
102 4bbq_A Lysine-specific demethy 87.7 0.22 7.6E-06 42.0 2.1 35 133-169 74-111 (117)
103 2kgg_A Histone demethylase jar 87.4 0.22 7.6E-06 37.1 1.7 44 169-213 3-52 (52)
104 2vpb_A Hpygo1, pygopus homolog 86.1 0.12 3.9E-06 40.7 -0.6 43 171-213 11-64 (65)
105 3o70_A PHD finger protein 13; 85.7 0.24 8.1E-06 39.2 1.1 40 173-214 23-66 (68)
106 1wee_A PHD finger family prote 85.2 0.29 9.9E-06 38.6 1.4 35 179-214 31-65 (72)
107 3rsn_A SET1/ASH2 histone methy 83.0 0.58 2E-05 43.8 2.6 31 123-156 6-40 (177)
108 2lq6_A Bromodomain-containing 82.0 0.42 1.4E-05 39.5 1.1 33 122-154 17-51 (87)
109 3pur_A Lysine-specific demethy 80.8 1.1 3.9E-05 48.0 4.2 35 180-214 59-93 (528)
110 1wem_A Death associated transc 79.2 0.31 1.1E-05 38.6 -0.5 43 173-215 20-70 (76)
111 1wew_A DNA-binding family prot 78.4 0.53 1.8E-05 37.7 0.6 49 160-214 13-71 (78)
112 3o7a_A PHD finger protein 13 v 72.2 1.1 3.7E-05 33.2 0.8 34 179-214 18-51 (52)
113 2d8s_A Cellular modulator of i 71.4 0.78 2.7E-05 37.0 -0.1 38 119-156 12-54 (80)
114 3kqi_A GRC5, PHD finger protei 71.3 0.62 2.1E-05 37.0 -0.7 37 179-215 25-61 (75)
115 4ap4_A E3 ubiquitin ligase RNF 67.0 0.28 9.6E-06 40.7 -3.8 84 121-216 6-123 (133)
116 2jtn_A LIM domain-binding prot 63.1 5.5 0.00019 35.7 3.7 51 123-177 61-128 (182)
117 1vyx_A ORF K3, K3RING; zinc-bi 61.2 0.86 2.9E-05 34.8 -1.7 46 119-167 3-51 (60)
118 2rsd_A E3 SUMO-protein ligase 61.0 4.1 0.00014 31.7 2.1 41 173-213 14-63 (68)
119 3lqh_A Histone-lysine N-methyl 59.1 2.3 8E-05 39.5 0.5 46 170-215 4-63 (183)
120 2lk0_A RNA-binding protein 5; 50.0 6.9 0.00024 26.6 1.6 8 161-168 3-10 (32)
121 3kv5_D JMJC domain-containing 48.0 3.6 0.00012 43.5 -0.2 37 179-215 52-88 (488)
122 3nw0_A Non-structural maintena 45.9 6.2 0.00021 37.8 1.1 45 168-215 180-226 (238)
123 2k1p_A Zinc finger RAN-binding 44.9 9.6 0.00033 26.1 1.6 9 160-168 3-11 (33)
124 1iym_A EL5; ring-H2 finger, ub 44.6 8.9 0.00031 27.1 1.5 34 120-155 3-40 (55)
125 2lq6_A Bromodomain-containing 43.2 11 0.00039 30.8 2.1 35 159-196 11-50 (87)
126 3pfq_A PKC-B, PKC-beta, protei 41.0 14 0.00046 39.6 2.9 75 120-196 46-147 (674)
127 3kv4_A PHD finger protein 8; e 40.2 3.5 0.00012 43.2 -1.7 37 179-215 20-56 (447)
128 2ecl_A Ring-box protein 2; RNF 40.0 9 0.00031 30.0 1.0 38 116-155 9-61 (81)
129 2rgt_A Fusion of LIM/homeobox 38.8 16 0.00054 32.3 2.6 51 123-177 7-74 (169)
130 1x4j_A Ring finger protein 38; 38.5 7.1 0.00024 29.7 0.2 35 119-155 20-57 (75)
131 3vk6_A E3 ubiquitin-protein li 37.9 6.5 0.00022 33.8 -0.1 50 169-222 2-53 (101)
132 2ect_A Ring finger protein 126 36.6 18 0.00061 27.4 2.2 36 118-155 11-49 (78)
133 3rsn_A SET1/ASH2 histone methy 36.6 28 0.00094 32.5 3.9 43 173-215 9-59 (177)
134 2ct0_A Non-SMC element 1 homol 35.2 11 0.00038 30.1 0.9 43 170-215 17-61 (74)
135 1v87_A Deltex protein 2; ring- 35.0 8.1 0.00028 31.6 0.0 15 141-155 60-74 (114)
136 2ckl_B Ubiquitin ligase protei 33.6 10 0.00035 33.2 0.4 30 183-216 71-100 (165)
137 3lrq_A E3 ubiquitin-protein li 32.7 8.4 0.00029 31.3 -0.3 43 170-216 24-68 (100)
138 1weo_A Cellulose synthase, cat 32.7 19 0.00064 30.5 1.9 46 169-218 17-70 (93)
139 1joc_A EEA1, early endosomal a 31.4 17 0.00058 31.5 1.4 35 180-214 86-121 (125)
140 1vfy_A Phosphatidylinositol-3- 31.2 27 0.00092 27.3 2.5 53 163-216 7-67 (73)
141 2ysl_A Tripartite motif-contai 30.6 32 0.0011 25.5 2.8 35 118-155 16-51 (73)
142 1bor_A Transcription factor PM 30.4 41 0.0014 24.3 3.2 26 183-216 22-47 (56)
143 2yw8_A RUN and FYVE domain-con 30.0 14 0.00048 29.6 0.7 47 170-216 21-73 (82)
144 2kiz_A E3 ubiquitin-protein li 29.9 13 0.00044 27.6 0.4 36 118-155 10-48 (69)
145 3l11_A E3 ubiquitin-protein li 29.1 22 0.00074 29.2 1.7 31 184-218 32-62 (115)
146 2ysj_A Tripartite motif-contai 29.0 27 0.00092 25.4 2.0 48 117-169 15-63 (63)
147 3dpl_R Ring-box protein 1; ubi 28.5 13 0.00044 31.3 0.2 15 141-155 72-86 (106)
148 4a0k_B E3 ubiquitin-protein li 28.3 13 0.00045 32.0 0.2 38 118-155 44-97 (117)
149 1dvp_A HRS, hepatocyte growth 27.4 29 0.001 32.1 2.4 47 167-215 160-216 (220)
150 1chc_A Equine herpes virus-1 r 27.1 13 0.00044 27.4 -0.1 44 171-219 8-53 (68)
151 2l0b_A E3 ubiquitin-protein li 26.9 11 0.00037 30.1 -0.5 35 119-155 37-74 (91)
152 2ct0_A Non-SMC element 1 homol 25.9 21 0.0007 28.5 0.9 34 120-155 13-47 (74)
153 1jm7_A BRCA1, breast cancer ty 25.5 20 0.00069 28.8 0.8 32 183-216 37-68 (112)
154 2ct2_A Tripartite motif protei 24.9 23 0.00079 27.1 1.0 36 117-155 10-50 (88)
155 1rut_X Flinc4, fusion protein 24.9 27 0.00092 31.4 1.6 18 160-177 52-78 (188)
156 3fl2_A E3 ubiquitin-protein li 24.4 17 0.0006 30.2 0.3 29 184-216 69-97 (124)
157 2ecj_A Tripartite motif-contai 24.4 44 0.0015 23.5 2.4 46 118-168 11-57 (58)
158 3zyq_A Hepatocyte growth facto 24.4 36 0.0012 32.0 2.4 47 167-215 163-219 (226)
159 3k1l_B Fancl; UBC, ring, RWD, 24.3 23 0.0008 36.6 1.2 36 171-216 311-371 (381)
160 1v5n_A PDI-like hypothetical p 24.1 26 0.00088 28.7 1.2 29 169-197 48-79 (89)
161 6rxn_A Rubredoxin; electron tr 23.9 50 0.0017 24.4 2.6 35 180-215 5-39 (46)
162 2xqn_T Testin, TESS; metal-bin 23.7 30 0.001 28.7 1.5 17 161-177 49-72 (126)
163 2ep4_A Ring finger protein 24; 23.7 24 0.00081 26.5 0.9 35 118-155 11-49 (74)
164 1e4u_A Transcriptional repress 23.6 24 0.00082 27.9 0.9 29 184-216 32-60 (78)
165 3nw0_A Non-structural maintena 23.5 22 0.00077 33.9 0.8 32 122-155 180-212 (238)
166 2jne_A Hypothetical protein YF 22.5 42 0.0014 28.8 2.2 36 179-216 48-91 (101)
167 1j2o_A FLIN2, fusion of rhombo 22.5 89 0.003 25.7 4.3 14 201-214 90-103 (114)
168 1r79_A Diacylglycerol kinase, 22.4 23 0.0008 29.0 0.6 27 169-195 39-72 (84)
169 1t1h_A Gspef-atpub14, armadill 22.1 20 0.0007 27.1 0.2 29 184-216 25-53 (78)
170 3t7l_A Zinc finger FYVE domain 22.0 15 0.00052 30.0 -0.6 48 170-217 22-75 (90)
171 2yqq_A Zinc finger HIT domain- 22.0 36 0.0012 26.2 1.6 30 166-195 10-40 (56)
172 2a20_A Regulating synaptic mem 21.7 27 0.00093 27.6 0.8 42 170-214 11-59 (62)
173 2yur_A Retinoblastoma-binding 21.5 22 0.00077 27.0 0.3 38 116-155 9-47 (74)
174 2ecm_A Ring finger and CHY zin 21.2 24 0.00083 24.7 0.4 32 180-216 22-53 (55)
175 3he5_A Synzip1; heterodimeric 20.4 1.2E+02 0.004 22.4 3.9 26 410-435 23-48 (49)
176 2co8_A NEDD9 interacting prote 20.4 78 0.0027 24.5 3.3 28 120-151 13-43 (82)
177 2jrp_A Putative cytoplasmic pr 20.4 78 0.0027 26.1 3.3 11 206-216 51-61 (81)
178 4ayc_A E3 ubiquitin-protein li 20.2 29 0.00099 29.6 0.8 28 184-216 70-97 (138)
179 1n0z_A ZNF265; zinc finger, RN 20.1 59 0.002 23.7 2.3 27 160-186 11-37 (45)
No 1
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.80 E-value=4.1e-20 Score=159.89 Aligned_cols=91 Identities=42% Similarity=0.890 Sum_probs=80.2
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccCCceeeccCCCccccccccC
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKASYYMCYTCTYSLCKGCTK 195 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k~sl~~C~~Cp~AyH~~CL~ 195 (473)
..+..++++|++|++||+||+||+++||++||+.||++.. .|.|.|+||+|.|.+|++.+.++|..||+|||..|+.
T Consensus 9 ~~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~L~~---~P~g~W~Cp~c~C~~C~k~~~~~C~~Cp~sfC~~c~~ 85 (107)
T 4gne_A 9 EPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQ---PPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEK 85 (107)
T ss_dssp -CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGTCSS---CCSSCCCCGGGBCTTTCSBCCEECSSSSCEECTTTCT
T ss_pred CCcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCcCCc---CCCCCEECCCCCCCcCCCCCCcCcCCCCcchhhhccC
Confidence 3456899999999999999999977899999999999553 5899999999999999999999999999999999998
Q ss_pred CCccccccCCeeecC
Q 041992 196 GADYYSLRGNKGFCG 210 (473)
Q Consensus 196 ~~~~~sv~~~kwfC~ 210 (473)
++. ...+.+.|+|.
T Consensus 86 g~l-~~~~~~~~~c~ 99 (107)
T 4gne_A 86 GAL-VPSALEGRLCC 99 (107)
T ss_dssp TSC-EECTTTTCEEC
T ss_pred Ccc-eecCCCCceec
Confidence 654 44567889984
No 2
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.73 E-value=1.6e-18 Score=148.18 Aligned_cols=93 Identities=24% Similarity=0.539 Sum_probs=82.0
Q ss_pred ccccccccccccccCce---eecCCCCCCCcccccccCcccccCCCCCceeecCc-ccccccCCc----eeeccCCCccc
Q 041992 118 KTEEEDVCFICFDGGSL---VLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH-ICSICEKAS----YYMCYTCTYSL 189 (473)
Q Consensus 118 ~~~ned~CfVC~dGGeL---v~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H-~C~vC~k~s----l~~C~~Cp~Ay 189 (473)
...++++|.+|+++|++ |.|+ +|+++||+.||++.... .+.+.|+||.| .|.+|++.+ ++.|+.|+++|
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~--~C~~~~H~~Cl~~~~~~-~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C~~~y 79 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCT--TCGQHYHGMCLDIAVTP-LKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGY 79 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECS--SSCCEECTTTTTCCCCT-TTSTTCCCTTTCCCTTTCCCSCCTTEEECSSSCCEE
T ss_pred CCCCCCCCcCCCCCCCCcCCeECC--CCCCCcChHHhCCcccc-ccccCccCCcCCcccccCccCCCCCeeECCCCCcHH
Confidence 34689999999999976 9999 79999999999998754 36799999999 699999875 89999999999
Q ss_pred cccccCCCccccccCCeeecCCCCc
Q 041992 190 CKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 190 H~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
|..|+.+ ++..+|.+.|||+.|..
T Consensus 80 H~~Cl~p-pl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 80 HTFCLQP-VMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp EGGGSSS-CCSSCCSSCCCCHHHHC
T ss_pred hHHhcCC-ccccCCCCCcCCcCCcC
Confidence 9999985 56788999999998864
No 3
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.61 E-value=6.7e-17 Score=139.78 Aligned_cols=91 Identities=22% Similarity=0.530 Sum_probs=76.6
Q ss_pred ccccccccc----------CceeecCCCCCCCcccccccCcccc--cCCCCCceeecCc-ccccccCC----ceeeccCC
Q 041992 123 DVCFICFDG----------GSLVLCDRKGCPKAYHPACIKREES--FFRSKAKWNCGWH-ICSICEKA----SYYMCYTC 185 (473)
Q Consensus 123 d~CfVC~dG----------GeLv~CD~~gCPraYH~~CL~p~~~--~~~p~g~W~CP~H-~C~vC~k~----sl~~C~~C 185 (473)
++|.+|..+ |+||.|+ +|+++||+.||++... ...+.+.|+|+.| .|.+|+.. .++.|+.|
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~C 79 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCA--DCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDC 79 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECS--SSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCCTTTTTEEECSSS
T ss_pred CcCccCCCCccccccCCCCCCCeEeC--CCCCccchhhCCChhhhhhccCCCccCccccCccCcccccCCCCceEEcCCC
Confidence 678888654 4999999 7999999999998632 1136789999999 79999985 38999999
Q ss_pred CccccccccCCCccccccCCeeecCCCCcch
Q 041992 186 TYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 186 p~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
+++||..|+.+ ++..+|.+.|||+.|...+
T Consensus 80 ~~~yH~~Cl~p-pl~~~P~g~W~C~~C~~~~ 109 (114)
T 2kwj_A 80 DRGYHMYCLNP-PVAEPPEGSWSCHLCWELL 109 (114)
T ss_dssp CCEEETTTSSS-CCSSCCSSCCCCHHHHHHH
T ss_pred CccccccccCC-CccCCCCCCeECccccchh
Confidence 99999999984 5788999999999997643
No 4
>2bze_A KIAA0252 protein; human RTF1 PLUS3 domain, transcription, elongation, PAF1 complex, histone H3 methylation, H2B ubiquitination, CDC73, LEO1, CTR9; NMR {Homo sapiens} SCOP: b.34.21.1
Probab=99.60 E-value=8.7e-16 Score=139.76 Aligned_cols=82 Identities=24% Similarity=0.409 Sum_probs=79.3
Q ss_pred ceeeeeeeecCcccccCCcccceEEEeeCCCccceeeeecccCCCCCHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 041992 337 MPLIKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEKAMSLQA 416 (473)
Q Consensus 337 l~qV~G~~k~~e~yk~~~~~~~i~L~i~nl~k~~~i~i~~ls~~df~eeEC~~lrq~ik~gl~kr~tv~~~eeka~~l~~ 416 (473)
|+||+|+.+..++|+++++.|++.|.|.+-...++++|++|||++|||+||++++|.++++.+++||+.+|++|++.||+
T Consensus 71 l~qI~gv~~~~k~Y~l~~~~T~~~L~l~~g~~~r~~~m~~vSN~~fte~Ef~~w~~~~~~~~~~~PT~~~v~~K~~~i~~ 150 (153)
T 2bze_A 71 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKE 150 (153)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEEEESSSCEEEECGGGBCCSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHHHH
T ss_pred EEEEEeEEecCcccccCCcccceEEEEEECCcceEEEeeEeeCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888889999999999999999999999999999999999999999999998
Q ss_pred HH
Q 041992 417 LR 418 (473)
Q Consensus 417 ~~ 418 (473)
++
T Consensus 151 a~ 152 (153)
T 2bze_A 151 AL 152 (153)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 5
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.59 E-value=2.5e-16 Score=135.64 Aligned_cols=92 Identities=23% Similarity=0.589 Sum_probs=76.2
Q ss_pred ccccccccccc---------cCceeecCCCCCCCcccccccCccc--ccCCCCCceeecCc-ccccccCC-----ceeec
Q 041992 120 EEEDVCFICFD---------GGSLVLCDRKGCPKAYHPACIKREE--SFFRSKAKWNCGWH-ICSICEKA-----SYYMC 182 (473)
Q Consensus 120 ~ned~CfVC~d---------GGeLv~CD~~gCPraYH~~CL~p~~--~~~~p~g~W~CP~H-~C~vC~k~-----sl~~C 182 (473)
...++|.+|.. +|+||.|+ +|+++||+.||+... ....+.+.|+|+.| .|.+|+.. .++.|
T Consensus 3 ~p~~~C~~C~~~~~~~~~g~~~~Ll~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~vC~~~~~~~~~ll~C 80 (112)
T 3v43_A 3 EPIPICSFCLGTKEQNREKKPEELISCA--DCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFC 80 (112)
T ss_dssp CCCSSBTTTCCCTTCCTTSCCCCCEECT--TTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCCBTTTCCCCCTTCCCEEC
T ss_pred ccCccccccCCchhhCcCCCchhceEhh--hcCCCCCCchhcCCHHHHHHhhccccccccCCccccccCcCCCccceEEc
Confidence 34678999954 45899999 799999999998632 11246789999999 89999975 38999
Q ss_pred cCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 183 YTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 183 ~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+.|+++||..|+.+ ++..+|.+.|||+.|..
T Consensus 81 d~C~~~yH~~Cl~p-~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 81 DSCDRGFHMECCDP-PLTRMPKGMWICQICRP 111 (112)
T ss_dssp TTTCCEECGGGCSS-CCSSCCSSCCCCTTTSC
T ss_pred CCCCCeeecccCCC-CCCCCCCCCeECCCCCC
Confidence 99999999999984 57788999999999964
No 6
>3u1u_A RNA polymerase-associated protein RTF1 homolog; plus-3, transcription elongation, structural genomics, struc genomics consortium, SGC; 1.80A {Homo sapiens} PDB: 2db9_A
Probab=99.54 E-value=4.2e-15 Score=132.78 Aligned_cols=80 Identities=25% Similarity=0.434 Sum_probs=77.2
Q ss_pred ceeeeeeeecCcccccCCcccceEEEeeCCCccceeeeecccCCCCCHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 041992 337 MPLIKGTSKVGKPYKIGDRTADVILEIRNLQKKEVVAIDAISNQEFSEDECSRLRQSIKCGFIKHLTVGEIQEKAMSLQA 416 (473)
Q Consensus 337 l~qV~G~~k~~e~yk~~~~~~~i~L~i~nl~k~~~i~i~~ls~~df~eeEC~~lrq~ik~gl~kr~tv~~~eeka~~l~~ 416 (473)
|+||+|+.+..++|++++..|++.|.+.+-...++++|+.|||++|||+||++++|.++++.+++||+.+|++|++.||+
T Consensus 57 l~qI~gv~~~~k~Y~l~~~~T~~~L~l~~g~~~r~~~~~~vSN~~fte~E~~~w~~~~~~~~~~~Pt~~~l~~K~~~i~~ 136 (137)
T 3u1u_A 57 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKE 136 (137)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEGGGBCSSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHTCC
T ss_pred EEEEEEEEecCcccccCCceeeEEEEEEeCCcceEEEeeeecCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999998877889999999999999999999999999999999999999999999875
No 7
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.24 E-value=4.7e-12 Score=98.77 Aligned_cols=54 Identities=30% Similarity=0.764 Sum_probs=47.1
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcccc
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICS 172 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~ 172 (473)
...+.++++|.+|+++|+||+|| +|+++||+.|++|+... .|.+.|+||.|...
T Consensus 3 ~~~d~~~~~C~vC~~~g~ll~Cd--~C~~~fH~~Cl~ppl~~-~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 3 LGSDHHMEFCRVCKDGGELLCCD--TCPSSYHIHCLNPPLPE-IPNGEWLCPRCTCP 56 (61)
T ss_dssp TCSCSSCSSCTTTCCCSSCBCCS--SSCCCBCSSSSSSCCSS-CCSSCCCCTTTTTT
T ss_pred ccccCCCCcCCCCCCCCCEEEcC--CCCHHHcccccCCCcCc-CCCCccCChhhcCc
Confidence 45678899999999999999999 79999999999998765 58899999987543
No 8
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.20 E-value=2.7e-12 Score=120.41 Aligned_cols=124 Identities=21% Similarity=0.410 Sum_probs=73.3
Q ss_pred ccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccCCc-eeeccCCCccccccccCC
Q 041992 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS-YYMCYTCTYSLCKGCTKG 196 (473)
Q Consensus 118 ~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k~s-l~~C~~Cp~AyH~~CL~~ 196 (473)
.+.++++|.+|++||+|++|| +|+++||..|++|+... .|.|.|+||.| ..-++.. .+.|..+..+.-.. ..
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd--~C~~~~H~~Cl~p~l~~-~p~~~W~C~~C--~~~~~~~~~~~c~~~~~s~k~~-~~- 75 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCE--KCPKVFHLTCHVPTLLS-FPSGDWICTFC--RDIGKPEVEYDCDNLQHSKKGK-TA- 75 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECS--SSSCEECTTTSSSCCSS-CCSSCCCCTTT--SCSSSCSSCCSCC-----------C-
T ss_pred CCCCCCCCCCCCCCCceEEcC--CCCCccCCccCCCCCCC-CCCCCEEeCce--eCccccccccccccccchhhhh-hh-
Confidence 457889999999999999999 79999999999998765 58999999953 3322222 23333332211100 00
Q ss_pred CccccccCCeeecCCCCcchhhhhccCCCCCCceeeecCCCCccchhhHHHHHHhhhccCCChhh
Q 041992 197 ADYYSLRGNKGFCGICMRTIMLIENCAPGNQEKVVVDFDDKTSWEYLFKVYWIFLKEKLSLTLDE 261 (473)
Q Consensus 197 ~~~~sv~~~kwfC~~C~~~~~~iE~~~~~dseg~~VDf~D~~~~e~lfK~Yw~~iK~~~~Lt~~~ 261 (473)
..+.. . + =..|.+++..|-....+ ..|..+-.. -+.+||.+||.+++|+...
T Consensus 76 ~~ls~--~--~-~~~c~~il~~l~~~~~s------~~F~~Pv~~--~~pdY~~iIk~PmdL~tI~ 127 (207)
T 3u5n_A 76 QGLSP--V--D-QRKCERLLLYLYCHELS------IEFQEPVPA--SIPNYYKIIKKPMDLSTVK 127 (207)
T ss_dssp CSSCH--H--H-HHHHHHHHHHHHTSTTC------GGGSSCCCT--TSTTHHHHCSSCCCHHHHH
T ss_pred hcccH--H--H-HHHHHHHHHHHHhccch------hhhhccCCh--hhccHhHHhCCccCHHHHH
Confidence 00000 0 0 01345554444443221 235544332 4689999999999885443
No 9
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.16 E-value=7.6e-12 Score=98.76 Aligned_cols=49 Identities=39% Similarity=0.933 Sum_probs=43.5
Q ss_pred ccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 118 KTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 118 ~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
...++++|.+|+++|+||+|| +|+++||+.|++|+... .|.+.|+||.|
T Consensus 4 ~~~~~~~C~vC~~~g~ll~CD--~C~~~fH~~Cl~ppl~~-~P~g~W~C~~C 52 (66)
T 1xwh_A 4 AQKNEDECAVCRDGGELICCD--GCPRAFHLACLSPPLRE-IPSGTWRCSSC 52 (66)
T ss_dssp CCSCCCSBSSSSCCSSCEECS--SCCCEECTTTSSSCCSS-CCSSCCCCHHH
T ss_pred CCCCCCCCccCCCCCCEEEcC--CCChhhcccccCCCcCc-CCCCCeECccc
Confidence 346899999999999999999 79999999999998765 57899999865
No 10
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.14 E-value=9.7e-12 Score=96.23 Aligned_cols=49 Identities=31% Similarity=0.736 Sum_probs=43.7
Q ss_pred cccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcc
Q 041992 119 TEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 119 ~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
+.++++|.+|+++|+||.|| +|+++||+.|++|+... .|.+.|+||.|.
T Consensus 2 d~~~~~C~vC~~~g~ll~Cd--~C~~~fH~~Cl~ppl~~-~p~g~W~C~~C~ 50 (60)
T 2puy_A 2 MIHEDFCSVCRKSGQLLMCD--TCSRVYHLDCLDPPLKT-IPKGMWICPRCQ 50 (60)
T ss_dssp CCCCSSCTTTCCCSSCEECS--SSSCEECGGGSSSCCSS-CCCSCCCCHHHH
T ss_pred CCCCCCCcCCCCCCcEEEcC--CCCcCEECCcCCCCcCC-CCCCceEChhcc
Confidence 46889999999999999999 79999999999998765 588999999753
No 11
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=1.3e-11 Score=94.35 Aligned_cols=50 Identities=30% Similarity=0.755 Sum_probs=44.4
Q ss_pred CccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 117 RKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 117 ~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
....++++|.+|+++|+||.|| +|+++||+.|++|+... .|.+.|+||.|
T Consensus 4 g~~~~~~~C~vC~~~g~ll~Cd--~C~~~~H~~Cl~ppl~~-~p~g~W~C~~C 53 (56)
T 2yql_A 4 GSSGHEDFCSVCRKSGQLLMCD--TCSRVYHLDCLDPPLKT-IPKGMWICPRC 53 (56)
T ss_dssp CCCSSCCSCSSSCCSSCCEECS--SSSCEECSSSSSSCCCS-CCCSSCCCHHH
T ss_pred CcCCCCCCCccCCCCCeEEEcC--CCCcceECccCCCCcCC-CCCCceEChhh
Confidence 4567899999999999999999 79999999999998765 58899999864
No 12
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.13 E-value=2.8e-11 Score=101.68 Aligned_cols=52 Identities=21% Similarity=0.572 Sum_probs=46.4
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcc
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
...+.++++|.+|+++|+|++|| +|+++||+.|+.|+... +|.+.|+||.|.
T Consensus 19 ~~~d~n~~~C~vC~~~g~LL~CD--~C~~~fH~~Cl~PpL~~-~P~g~W~C~~C~ 70 (88)
T 1fp0_A 19 GTLDDSATICRVCQKPGDLVMCN--QCEFCFHLDCHLPALQD-VPGEEWSCSLCH 70 (88)
T ss_dssp CSSSSSSSCCSSSCSSSCCEECT--TSSCEECTTSSSTTCCC-CCSSSCCCCSCC
T ss_pred cccCCCCCcCcCcCCCCCEEECC--CCCCceecccCCCCCCC-CcCCCcCCcccc
Confidence 45678999999999999999999 79999999999998765 689999999754
No 13
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.12 E-value=1.9e-11 Score=95.36 Aligned_cols=51 Identities=35% Similarity=0.939 Sum_probs=44.7
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.....++++|.+|+++|+|++|| +|+++||+.||+++... .|.+.|+||.|
T Consensus 5 ~~~~~~~~~C~vC~~~g~ll~CD--~C~~~fH~~Cl~p~l~~-~p~g~W~C~~C 55 (61)
T 2l5u_A 5 SYETDHQDYCEVCQQGGEIILCD--TCPRAYHMVCLDPDMEK-APEGKWSCPHC 55 (61)
T ss_dssp CCSSCCCSSCTTTSCCSSEEECS--SSSCEEEHHHHCTTCCS-CCCSSCCCTTG
T ss_pred cccCCCCCCCccCCCCCcEEECC--CCChhhhhhccCCCCCC-CCCCceECccc
Confidence 34567889999999999999999 79999999999998654 58899999965
No 14
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.06 E-value=5.1e-11 Score=109.59 Aligned_cols=47 Identities=32% Similarity=0.836 Sum_probs=42.6
Q ss_pred ccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.|+++|.+|++||+|++|| +|+++||..|+.|+... .|.|.|+||.|
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd--~C~~~~H~~C~~p~l~~-~p~~~W~C~~C 48 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCE--KCPKVFHLSCHVPTLTN-FPSGEWICTFC 48 (184)
T ss_dssp CSCSSCTTTCCCSSCEECS--SSSCEECTTTSSSCCSS-CCSSCCCCTTT
T ss_pred CCCCccccCCCCCeeeecC--CCCcccCccccCCCCCC-CCCCCEECccc
Confidence 5889999999999999999 79999999999998765 58899999964
No 15
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.03 E-value=7.1e-11 Score=93.94 Aligned_cols=47 Identities=23% Similarity=0.466 Sum_probs=41.6
Q ss_pred ccccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.+...|.+|+++|+||+|| +|+++||..|++|+... .|.+.|+|+.|
T Consensus 10 ~~~~~C~vC~~~~~ll~Cd--~C~~~~H~~Cl~P~l~~-~P~g~W~C~~C 56 (66)
T 2lri_C 10 APGARCGVCGDGTDVLRCT--HCAAAFHWRCHFPAGTS-RPGTGLRCRSC 56 (66)
T ss_dssp CTTCCCTTTSCCTTCEECS--SSCCEECHHHHCTTTCC-CCSSSCCCTTT
T ss_pred CCCCCcCCCCCCCeEEECC--CCCCceecccCCCccCc-CCCCCEECccc
Confidence 4556799999999999999 79999999999998765 68999999965
No 16
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.92 E-value=3.2e-10 Score=94.56 Aligned_cols=50 Identities=30% Similarity=0.701 Sum_probs=43.4
Q ss_pred CccccccccccccccC-----ceeecCCCCCCCcccccccCcccccCCCCCceeecCccc
Q 041992 117 RKTEEEDVCFICFDGG-----SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHIC 171 (473)
Q Consensus 117 ~~~~ned~CfVC~dGG-----eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C 171 (473)
....++++|.+|+++| +||+|| +|+++||+.|++++. .|.|.|+|+.|..
T Consensus 20 ~~~~~~~~C~vC~~~~s~~~~~ll~CD--~C~~~fH~~Cl~p~~---vP~g~W~C~~C~~ 74 (88)
T 2l43_A 20 SLIDEDAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVPY---IPEGQWLCRHCLQ 74 (88)
T ss_dssp CCCCCCCCCSSCCSSSSCSEEEEEECS--SSCCCCCHHHHTCSS---CCSSCCCCHHHHH
T ss_pred CcCCCCCcCCcCCCCCCCCCCCEEECC--CCCchhhcccCCCCc---cCCCceECccccC
Confidence 3456889999999987 999999 799999999999985 6889999997643
No 17
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.91 E-value=4.9e-10 Score=104.45 Aligned_cols=49 Identities=22% Similarity=0.596 Sum_probs=43.1
Q ss_pred cccccccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCcccc
Q 041992 121 EEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICS 172 (473)
Q Consensus 121 ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~ 172 (473)
++++|.+|++||+|++|| +|+++||..|+.|+... .|.|.|+||.|...
T Consensus 1 s~~~C~~C~~~g~ll~Cd--~C~~~~H~~Cl~p~l~~-~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 1 SATICRVCQKPGDLVMCN--QCEFCFHLDCHLPALQD-VPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCCBTTTCCCSSCCCCT--TTCCBCCSTTSTTCCSS-CCCTTCCTTTTSCS
T ss_pred CCCcCccCCCCCceeECC--CCCchhccccCCCCccc-CCCCCCCCcCccCC
Confidence 468999999999999999 79999999999988754 58999999987544
No 18
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=4.3e-10 Score=94.37 Aligned_cols=58 Identities=26% Similarity=0.664 Sum_probs=48.3
Q ss_pred CccccccccccccccC---ceeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccCC
Q 041992 117 RKTEEEDVCFICFDGG---SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKA 177 (473)
Q Consensus 117 ~~~~ned~CfVC~dGG---eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k~ 177 (473)
....+++.|.+|+.++ .||+|| +|+++||+.||+|++.. +|.+.|+||.|.-..|++.
T Consensus 11 ~~~~~~~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~Ppl~~-~P~g~W~C~~C~~~~~~~~ 71 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGDEDDKLLFCD--GCDDNYHIFCLLPPLPE-IPRGIWRCPKCILAECKQP 71 (92)
T ss_dssp CCCCCCCCCSSSCCSGGGGGCEECT--TTCCEECSSSSSSCCSS-CCSSCCCCHHHHHHHHSCC
T ss_pred hhccCCCCCccCCCcCCCCCEEEcC--CCCchhccccCCCCccc-CCCCCcCCccCcCccccCC
Confidence 3456778999999877 599999 79999999999998765 6889999998876666654
No 19
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.83 E-value=9.1e-10 Score=82.24 Aligned_cols=43 Identities=33% Similarity=0.782 Sum_probs=37.4
Q ss_pred ccccccccC---ceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 124 VCFICFDGG---SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 124 ~CfVC~dGG---eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.|.+|+++| +||.|| +|+++||+.|++|+... .|.+.|+||.|
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p~l~~-~P~g~W~C~~C 47 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRPALYE-VPDGEWQCPAC 47 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCTTCCS-CCSSCCSCTTT
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCCCcCC-CCCCcEECcCc
Confidence 699999765 799999 79999999999988764 58899999975
No 20
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.80 E-value=1e-09 Score=99.30 Aligned_cols=54 Identities=28% Similarity=0.613 Sum_probs=45.4
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCccccc-----C-CCCCceeecCccc
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESF-----F-RSKAKWNCGWHIC 171 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~-----~-~p~g~W~CP~H~C 171 (473)
...+.++++|.+|++||+|++|| +||++||..||.++... . .|.+.|.|+.|.+
T Consensus 57 ~d~Dg~~d~C~vC~~GG~LlcCD--~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 57 RDSDGMDEQCRWCAEGGNLICCD--FCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp BCTTSCBCSCSSSCCCSSEEECS--SSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred ecCCCCCCeecccCCCCcEEeCC--CCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 44678999999999999999999 79999999999987631 1 3789999997644
No 21
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.80 E-value=7.6e-10 Score=89.14 Aligned_cols=48 Identities=31% Similarity=0.748 Sum_probs=42.0
Q ss_pred ccccccccccccccC-----ceeecCCCCCCCcccccccCcccccCCCCCceeecCcc
Q 041992 118 KTEEEDVCFICFDGG-----SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 118 ~~~ned~CfVC~dGG-----eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
...++++|.+|++++ +||+|| +|+++||+.|++++. .|.|.|+|+.|.
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD--~C~~~~H~~Cl~~~~---vP~g~W~C~~C~ 64 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVPY---IPEGQWLCRHCL 64 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECS--SSCCEEEHHHHTCSS---CCSSCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECC--CCCCccccccCCCCc---CCCCCcCCccCc
Confidence 456788999999875 999999 799999999999985 688999999764
No 22
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.80 E-value=7.6e-10 Score=86.48 Aligned_cols=50 Identities=30% Similarity=0.727 Sum_probs=42.0
Q ss_pred ccccccccccccc-----CceeecCCCCCCCcccccccCccccc--CCCCCceeecCcc
Q 041992 119 TEEEDVCFICFDG-----GSLVLCDRKGCPKAYHPACIKREESF--FRSKAKWNCGWHI 170 (473)
Q Consensus 119 ~~ned~CfVC~dG-----GeLv~CD~~gCPraYH~~CL~p~~~~--~~p~g~W~CP~H~ 170 (473)
..++++|.+|+.+ ++||+|| +|+++||+.|++|+... ..|.+.|+|+.|.
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd--~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~ 59 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICD--KCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCV 59 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECS--SSCCEEETTTSSSCCCHHHHHSSCCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECC--CCChHHHhhhCCCcccccccCCCCCEECCCCc
Confidence 4678899999987 8999999 79999999999997642 1278999998654
No 23
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.72 E-value=1.8e-09 Score=89.79 Aligned_cols=50 Identities=26% Similarity=0.556 Sum_probs=42.3
Q ss_pred ccccccccccccc-----CceeecCCCCCCCcccccccCccccc---CCCCCceeecCcc
Q 041992 119 TEEEDVCFICFDG-----GSLVLCDRKGCPKAYHPACIKREESF---FRSKAKWNCGWHI 170 (473)
Q Consensus 119 ~~ned~CfVC~dG-----GeLv~CD~~gCPraYH~~CL~p~~~~---~~p~g~W~CP~H~ 170 (473)
.+++.+|.+|+.+ +.||+|| +|+++||+.|++|+... .+|.+.|+|+.|.
T Consensus 13 ~e~~~~C~vC~~~~~~~~~~ll~CD--~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~ 70 (88)
T 1wev_A 13 MEMGLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp HHHCCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CCCCCcCCCCCCCCCCCCCceEECC--CCCCeEcCccCCCcccccccCCCCCCeeCcccc
Confidence 4577899999987 6899999 79999999999998752 2589999998654
No 24
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=5.4e-09 Score=85.39 Aligned_cols=46 Identities=26% Similarity=0.564 Sum_probs=40.1
Q ss_pred ccccccccc---ccCceeecCCCCCCCcccccccCcccccCCCCC-ceeecCc
Q 041992 121 EEDVCFICF---DGGSLVLCDRKGCPKAYHPACIKREESFFRSKA-KWNCGWH 169 (473)
Q Consensus 121 ned~CfVC~---dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g-~W~CP~H 169 (473)
++..|.+|+ ++|+||+|| +|+++||+.||+|++.. +|.| .|+||.|
T Consensus 25 ~~c~C~vC~~~~~~~~ll~CD--~C~~~yH~~Cl~Ppl~~-~P~g~~W~C~~C 74 (77)
T 2e6s_A 25 HSCSCRVCGGKHEPNMQLLCD--ECNVAYHIYCLNPPLDK-VPEEEYWYCPSC 74 (77)
T ss_dssp SSSSCSSSCCCCCSTTEEECS--SSCCEEETTSSSSCCSS-CCCSSCCCCTTT
T ss_pred CCCCCcCcCCcCCCCCEEEcC--CCCccccccccCCCccC-CCCCCCcCCcCc
Confidence 556899998 578999999 79999999999998765 5788 9999976
No 25
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.68 E-value=7.1e-09 Score=83.05 Aligned_cols=44 Identities=27% Similarity=0.643 Sum_probs=37.7
Q ss_pred cccccc---ccCceeecCCCCCCCcccccccCcccccCCCCC-ceeecCcc
Q 041992 124 VCFICF---DGGSLVLCDRKGCPKAYHPACIKREESFFRSKA-KWNCGWHI 170 (473)
Q Consensus 124 ~CfVC~---dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g-~W~CP~H~ 170 (473)
.|.+|+ ++|+||.|| +|+++||+.||+|++.. +|.| .|+||.|.
T Consensus 20 ~C~~C~~~~~~~~ll~CD--~C~~~yH~~Cl~Ppl~~-~P~g~~W~C~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPPLSS-VPSEDEWYCPECR 67 (70)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEEGGGSSSCCSS-CCSSSCCCCTTTS
T ss_pred CCcCCCCcCCCCCEEEcC--CCCCceecccCCCCcCC-CCCCCCcCCcCcc
Confidence 577888 578999999 79999999999998765 5788 99999763
No 26
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.62 E-value=2.5e-08 Score=79.86 Aligned_cols=53 Identities=19% Similarity=0.469 Sum_probs=46.5
Q ss_pred CCceeecCcccccccCC----ceeeccCCCccccccccCCCccccccCC-eeecCCCCc
Q 041992 161 KAKWNCGWHICSICEKA----SYYMCYTCTYSLCKGCTKGADYYSLRGN-KGFCGICMR 214 (473)
Q Consensus 161 ~g~W~CP~H~C~vC~k~----sl~~C~~Cp~AyH~~CL~~~~~~sv~~~-kwfC~~C~~ 214 (473)
...|+|+.|.|.+|++. .++.|+.|+++||..|+.+ ++..+|.+ .|||+.|..
T Consensus 11 ~~~w~C~~C~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~P-pl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 11 DVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP-PLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp CTTSCCTTTSBTTTCCCSCGGGEEECTTTCCEEEGGGSSS-CCSSCCSSSCCCCTTTSC
T ss_pred CCCeECCCCCCcCCCCcCCCCCEEEcCCCCCceecccCCC-CcCCCCCCCCcCCcCccC
Confidence 46799999999999974 2899999999999999984 57788888 999999974
No 27
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.59 E-value=6.4e-09 Score=92.77 Aligned_cols=54 Identities=28% Similarity=0.620 Sum_probs=44.6
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccc-----cC-CCCCceeecCccc
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREES-----FF-RSKAKWNCGWHIC 171 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~-----~~-~p~g~W~CP~H~C 171 (473)
...+.++++|.+|++||+|++|| .||++||..|+.+... .. .+.+.|.|+.|.+
T Consensus 51 ~d~Dg~~~~C~vC~dGG~LlcCd--~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 51 RDSDGMDEQCRWCAEGGNLICCD--FCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp BCTTSCBSSCTTTCCCSEEEECS--SSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred cCCCCCCCcCeecCCCCeeEecC--CCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45678999999999999999999 7999999999997631 11 2689999986643
No 28
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.57 E-value=3.2e-08 Score=80.90 Aligned_cols=53 Identities=19% Similarity=0.466 Sum_probs=46.3
Q ss_pred CCceeecCcccccccCCc----eeeccCCCccccccccCCCccccccCCe-eecCCCCc
Q 041992 161 KAKWNCGWHICSICEKAS----YYMCYTCTYSLCKGCTKGADYYSLRGNK-GFCGICMR 214 (473)
Q Consensus 161 ~g~W~CP~H~C~vC~k~s----l~~C~~Cp~AyH~~CL~~~~~~sv~~~k-wfC~~C~~ 214 (473)
.+.|+|+.|.|.+|++.. ++.|+.|+++||..|+.+ ++..+|.+. |||+.|.+
T Consensus 19 ~~~W~C~~C~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~P-pL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 19 DVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP-PLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp CTTSCCTTTSBTTTCCCSCGGGEEECTTTCCEEETTTSSS-CCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCCCcCCccCCCCCCcceeEeCCCCCccCcccCCC-cccCCCCCCceECcCccc
Confidence 477999999999999974 899999999999999985 467788877 99999974
No 29
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=6.6e-08 Score=78.93 Aligned_cols=52 Identities=15% Similarity=0.405 Sum_probs=45.6
Q ss_pred CceeecCcccccccCC----ceeeccCCCccccccccCCCccccccCC-eeecCCCCc
Q 041992 162 AKWNCGWHICSICEKA----SYYMCYTCTYSLCKGCTKGADYYSLRGN-KGFCGICMR 214 (473)
Q Consensus 162 g~W~CP~H~C~vC~k~----sl~~C~~Cp~AyH~~CL~~~~~~sv~~~-kwfC~~C~~ 214 (473)
..|+|+.+.|.+|++. .++.|+.|+.+||..|+.+ ++..+|.+ .|||+.|..
T Consensus 20 ~~w~C~~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~P-pl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 20 PEKKCHSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNP-PLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCCSSSSCSSSCCCCCSTTEEECSSSCCEEETTSSSS-CCSSCCCSSCCCCTTTCC
T ss_pred CCeECCCCCCcCcCCcCCCCCEEEcCCCCccccccccCC-CccCCCCCCCcCCcCccC
Confidence 4699999999999974 3899999999999999984 57788888 999999964
No 30
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.44 E-value=1.5e-07 Score=75.68 Aligned_cols=48 Identities=27% Similarity=0.736 Sum_probs=38.3
Q ss_pred cccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCcc
Q 041992 119 TEEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 119 ~~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
..+..+| +|++ .|+||.||...|+ .+||..||++.. .|.+.|+||.|.
T Consensus 13 ~~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~---~p~g~w~Cp~C~ 63 (71)
T 1wen_A 13 PNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTT---KPRGKWFCPRCS 63 (71)
T ss_dssp TTSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSS---CCSSCCCCTTTS
T ss_pred CCCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCc---CCCCCEECCCCC
Confidence 3456788 6987 6899999943499 599999999875 467999999653
No 31
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.43 E-value=8.9e-08 Score=82.30 Aligned_cols=43 Identities=28% Similarity=0.753 Sum_probs=37.5
Q ss_pred ccccccccC----ceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 124 VCFICFDGG----SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 124 ~CfVC~dGG----eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
+|.+|+++| +|+.|| .|+++||..||.|+... .|.+.|+||.|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd--~C~~~yH~~Cl~p~l~~-~P~~~W~C~~C 109 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCD--SCDRGFHMECCDPPLTR-MPKGMWICQIC 109 (112)
T ss_dssp CBTTTCCCCCTTCCCEECT--TTCCEECGGGCSSCCSS-CCSSCCCCTTT
T ss_pred ccccccCcCCCccceEEcC--CCCCeeecccCCCCCCC-CCCCCeECCCC
Confidence 689998754 899999 79999999999998765 68999999975
No 32
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.43 E-value=5.3e-08 Score=77.88 Aligned_cols=49 Identities=20% Similarity=0.430 Sum_probs=40.2
Q ss_pred cccccccccccccc---CceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 118 KTEEEDVCFICFDG---GSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 118 ~~~ned~CfVC~dG---GeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
...+..+|.+|+.+ +.+|.|| +|+.+||..||+++... .+.+.|+||.|
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~~~~~~-~~~~~w~C~~C 65 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCD--DCDDWYHWPCVGIMAAP-PEEMQWFCPKC 65 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECS--SSSSEEEHHHHTCSSCC-CSSSCCCCTTT
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcC--CCCcccccccCCCCccC-CCCCCEEChhc
Confidence 44566789999875 4799999 79999999999998754 35689999965
No 33
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.41 E-value=7.4e-08 Score=92.98 Aligned_cols=46 Identities=24% Similarity=0.545 Sum_probs=36.5
Q ss_pred ccccccccc---cCceeecCCCCCCCcccccccCcccccCCCCC-ceeecCcc
Q 041992 122 EDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFFRSKA-KWNCGWHI 170 (473)
Q Consensus 122 ed~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g-~W~CP~H~ 170 (473)
+..|.+|+. +|.|++|| +|+++||+.||+|++.. .|.| .|+||.|.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD--~C~~~yH~~CL~PPL~~-vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPPLSS-VPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC--CCEECS--SSCCEECSCC--CCCCS-CCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCCCCCeEEcC--CCCcceeCccCCCCccc-CCCCCCCCCcCCc
Confidence 557999986 67999999 79999999999998865 5788 99999764
No 34
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.40 E-value=5.7e-07 Score=75.85 Aligned_cols=47 Identities=28% Similarity=0.751 Sum_probs=37.8
Q ss_pred ccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCcc
Q 041992 120 EEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 120 ~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
....+| +|++ .|+||.||...|+ .+||..||++.. .|.+.|+||.|.
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~---~p~g~W~Cp~C~ 83 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTT---KPRGKWFCPRCS 83 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSS---CCCSSCCCTTTC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCc---CCCCCEECcCcc
Confidence 455678 8987 7899999943499 699999999875 467999999653
No 35
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.40 E-value=1.2e-07 Score=77.54 Aligned_cols=43 Identities=26% Similarity=0.640 Sum_probs=35.9
Q ss_pred cccccccc---CceeecCCCCCCCcccccccCcccccCCCCCc-eeecCc
Q 041992 124 VCFICFDG---GSLVLCDRKGCPKAYHPACIKREESFFRSKAK-WNCGWH 169 (473)
Q Consensus 124 ~CfVC~dG---GeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~-W~CP~H 169 (473)
.|.+|+.+ +.||+|| +|+++||+.||+|++.. .|.+. |+||.|
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~PpL~~-~P~g~~W~C~~C 74 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPPLSS-VPSEDEWYCPEC 74 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSSSCCSS-CCSSSCCCCTTT
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCCCcccC-CCCCCceECcCc
Confidence 46677654 5899999 79999999999998765 57888 999975
No 36
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.39 E-value=9.8e-08 Score=81.34 Aligned_cols=48 Identities=33% Similarity=0.872 Sum_probs=40.0
Q ss_pred ccccccccCc---eeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccC
Q 041992 124 VCFICFDGGS---LVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEK 176 (473)
Q Consensus 124 ~CfVC~dGGe---Lv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k 176 (473)
+|.+|+.+++ |+.|| .|+++||..||.|+... .|.+.|+|| .|..|+.
T Consensus 56 ~C~~C~~~~~~~~ll~Cd--~C~~~yH~~Cl~ppl~~-~P~g~W~C~--~C~~c~~ 106 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCD--TCDKGYHTFCLQPVMKS-VPTNGWKCK--NCRICIS 106 (111)
T ss_dssp CCTTTCCCSCCTTEEECS--SSCCEEEGGGSSSCCSS-CCSSCCCCH--HHHCCSC
T ss_pred cccccCccCCCCCeeECC--CCCcHHhHHhcCCcccc-CCCCCcCCc--CCcCcCC
Confidence 6999998875 99999 79999999999998765 588999999 4555543
No 37
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.39 E-value=7.6e-08 Score=83.06 Aligned_cols=43 Identities=26% Similarity=0.789 Sum_probs=37.4
Q ss_pred ccccccc---cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 124 VCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 124 ~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.|.+|+. +++||.|| +|+++||+.||+|+... .|.+.|+||.|
T Consensus 60 ~C~~C~~~~~~~~ll~Cd--~C~~~yH~~Cl~ppl~~-~P~g~W~C~~C 105 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCD--DCDRGYHMYCLNPPVAE-PPEGSWSCHLC 105 (114)
T ss_dssp CCTTTTCCTTTTTEEECS--SSCCEEETTTSSSCCSS-CCSSCCCCHHH
T ss_pred ccCcccccCCCCceEEcC--CCCccccccccCCCccC-CCCCCeECccc
Confidence 5888886 57999999 79999999999998765 68999999854
No 38
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.37 E-value=7.8e-08 Score=74.73 Aligned_cols=46 Identities=33% Similarity=0.848 Sum_probs=36.8
Q ss_pred ccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.+..+| +|++ +|+||.||+.+|+ .+||..||+... .|.+.|+||.|
T Consensus 7 ~e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~---~p~~~w~Cp~C 55 (59)
T 3c6w_A 7 NEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTT---KPKGKWFCPRC 55 (59)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS---CCSSCCCCHHH
T ss_pred CCCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCccc---CCCCCEECcCc
Confidence 455678 7997 7899999944499 599999999875 46799999854
No 39
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.34 E-value=1e-07 Score=74.76 Aligned_cols=46 Identities=30% Similarity=0.798 Sum_probs=37.0
Q ss_pred ccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.+..+| +|++ .|+||.||+-.|| .+||..||++.. .|.+.|+||.|
T Consensus 9 ~e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~---~p~~~w~Cp~C 57 (62)
T 2g6q_A 9 NEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTY---KPKGKWYCPKC 57 (62)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS---CCSSCCCCHHH
T ss_pred CCCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCc---CCCCCEECcCc
Confidence 445678 7998 7899999943488 899999999875 46799999954
No 40
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.33 E-value=1.1e-07 Score=73.89 Aligned_cols=46 Identities=28% Similarity=0.780 Sum_probs=36.5
Q ss_pred ccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.+..+| +|++ .|+||.||+..|+ .+||..||++.. .|.+.|+||.|
T Consensus 8 ~e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~---~p~g~w~C~~C 56 (60)
T 2vnf_A 8 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTT---KPRGKWFCPRC 56 (60)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSS---CCSSCCCCHHH
T ss_pred CCCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCCc---CCCCCEECcCc
Confidence 445678 7987 7899999943388 799999999775 46799999954
No 41
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.33 E-value=1.6e-07 Score=78.98 Aligned_cols=47 Identities=34% Similarity=0.857 Sum_probs=36.6
Q ss_pred ccccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecC
Q 041992 118 KTEEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGW 168 (473)
Q Consensus 118 ~~~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~ 168 (473)
......+| +|+. .|+||.||+-.|| .+||+.||++.. .|.+.|+||.
T Consensus 22 ~~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~---~p~~~W~Cp~ 71 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQ---APKGKWYCSK 71 (90)
T ss_dssp --CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSS---CTTSCCCSSH
T ss_pred CCCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCc---CCCCCccCCh
Confidence 34556688 7985 6799999954477 699999999875 4679999996
No 42
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.28 E-value=3e-07 Score=88.80 Aligned_cols=54 Identities=19% Similarity=0.464 Sum_probs=44.6
Q ss_pred CCCceeecCcccccccCC----ceeeccCCCccccccccCCCccccccCC-eeecCCCCc
Q 041992 160 SKAKWNCGWHICSICEKA----SYYMCYTCTYSLCKGCTKGADYYSLRGN-KGFCGICMR 214 (473)
Q Consensus 160 p~g~W~CP~H~C~vC~k~----sl~~C~~Cp~AyH~~CL~~~~~~sv~~~-kwfC~~C~~ 214 (473)
..+.|.|+.|.|.+|+.. .++.|+.|+.+||..|+.+ ++..+|.+ .|+|+.|..
T Consensus 166 ~~~~w~C~~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~P-PL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 166 DDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP-PLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TCTTSCCTTTSCSSSCCCCC--CCEECSSSCCEECSCC--C-CCCSCCSSSCCCCGGGC-
T ss_pred CCcCEecCCCCCcCCCCCCCCCCeEEcCCCCcceeCccCCC-CcccCCCCCCCCCcCCcC
Confidence 346799999999999984 3899999999999999984 57788888 999999964
No 43
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.26 E-value=1.3e-07 Score=86.91 Aligned_cols=46 Identities=15% Similarity=0.501 Sum_probs=39.5
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|.+|++++ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|....
T Consensus 6 ~C~~C~~~g~ll~Cd~C~~~~H~~C~~p-~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 6 WCAVCQNGGELLCCEKCPKVFHLSCHVP-TLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCTTTCCCSSCEECSSSSCEECTTTSSS-CCSSCCSSCCCCTTTSCSS
T ss_pred ccccCCCCCeeeecCCCCcccCccccCC-CCCCCCCCCEECccccCcc
Confidence 477888876 889999999999999974 5678889999999999753
No 44
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.13 E-value=1.4e-06 Score=67.70 Aligned_cols=45 Identities=20% Similarity=0.526 Sum_probs=38.5
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.|.+|+..+ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|...
T Consensus 11 ~C~vC~~~g~ll~Cd~C~~~fH~~Cl~p-pl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 11 FCRVCKDGGELLCCDTCPSSYHIHCLNP-PLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCTTTCCCSSCBCCSSSCCCBCSSSSSS-CCSSCCSSCCCCTTTTTT
T ss_pred cCCCCCCCCCEEEcCCCCHHHcccccCC-CcCcCCCCccCChhhcCc
Confidence 467888765 889999999999999984 567889999999999864
No 45
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.11 E-value=9.7e-07 Score=70.11 Aligned_cols=45 Identities=20% Similarity=0.416 Sum_probs=39.3
Q ss_pred cccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 169 HICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 169 H~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
..|.+|++.+ ++.|+.|+++||..|+. +++..+|.+.|||..|..
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~-P~l~~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAAFHWRCHF-PAGTSRPGTGLRCRSCSG 58 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCEECHHHHC-TTTCCCCSSSCCCTTTTT
T ss_pred CCcCCCCCCCeEEECCCCCCceecccCC-CccCcCCCCCEECccccC
Confidence 4588999876 88999999999999998 457789999999999975
No 46
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.08 E-value=1.9e-06 Score=72.40 Aligned_cols=54 Identities=20% Similarity=0.486 Sum_probs=43.9
Q ss_pred CCceeecCc-ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 161 KAKWNCGWH-ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 161 ~g~W~CP~H-~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
...|..... .|.+|++.+ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|...
T Consensus 17 ~~~~~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~P-pL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLP-ALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp CCCSSSSSSSCCSSSCSSSCCEECTTSSCEECTTSSST-TCCCCCSSSCCCCSCCCC
T ss_pred cccccCCCCCcCcCcCCCCCEEECCCCCCceecccCCC-CCCCCcCCCcCCccccCC
Confidence 344554433 688999876 889999999999999974 578899999999999864
No 47
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.05 E-value=1.4e-06 Score=64.77 Aligned_cols=44 Identities=20% Similarity=0.578 Sum_probs=38.2
Q ss_pred ccccccCCc----eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 170 ICSICEKAS----YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~s----l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.|.+|++.+ ++.|+.|+++||..|+.+ ++..+|.+.|||+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p-~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRP-ALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCT-TCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCC-CcCCCCCCcEECcCccc
Confidence 488898764 899999999999999984 56788999999999975
No 48
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=1.1e-06 Score=67.02 Aligned_cols=44 Identities=25% Similarity=0.600 Sum_probs=37.2
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.|.+|++.+ ++.|+.|+.+||..|+.+ ++..+|.+.|||+.|..
T Consensus 11 ~C~vC~~~g~ll~Cd~C~~~~H~~Cl~p-pl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 11 FCSVCRKSGQLLMCDTCSRVYHLDCLDP-PLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCSSSCCSSCCEECSSSSCEECSSSSSS-CCCSCCCSSCCCHHHHC
T ss_pred CCccCCCCCeEEEcCCCCcceECccCCC-CcCCCCCCceEChhhhC
Confidence 366888766 889999999999999984 56788999999998853
No 49
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.02 E-value=2.3e-06 Score=72.30 Aligned_cols=41 Identities=22% Similarity=0.522 Sum_probs=32.5
Q ss_pred cccccccCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 125 CFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 125 CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
|..+.++|.||.|| .|+++||..|++++... .| ..|+||.|
T Consensus 33 C~~~~~~~~mi~Cd--~C~~w~H~~C~~~~~~~-~p-~~w~C~~C 73 (98)
T 2lv9_A 33 CGFTHDDGYMICCD--KCSVWQHIDCMGIDRQH-IP-DTYLCERC 73 (98)
T ss_dssp TSCCSCSSCEEEBT--TTCBEEETTTTTCCTTS-CC-SSBCCTTT
T ss_pred CCCccCCCcEEEcC--CCCCcCcCcCCCCCccC-CC-CCEECCCC
Confidence 44445678999999 79999999999998654 23 58999864
No 50
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.01 E-value=1.2e-06 Score=67.59 Aligned_cols=46 Identities=24% Similarity=0.592 Sum_probs=39.2
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|.+|++.+ ++.|+.|+.+||..|+.+ ++..+|.+.|+|+.|....
T Consensus 7 ~C~vC~~~g~ll~Cd~C~~~fH~~Cl~p-pl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 7 FCSVCRKSGQLLMCDTCSRVYHLDCLDP-PLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp SCTTTCCCSSCEECSSSSCEECGGGSSS-CCSSCCCSCCCCHHHHHHH
T ss_pred CCcCCCCCCcEEEcCCCCcCEECCcCCC-CcCCCCCCceEChhccChh
Confidence 477898876 889999999999999984 5678899999999997643
No 51
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.01 E-value=2.1e-06 Score=71.98 Aligned_cols=55 Identities=15% Similarity=0.293 Sum_probs=47.4
Q ss_pred CCCceeecCc-ccccccCCc----eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 160 SKAKWNCGWH-ICSICEKAS----YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 160 p~g~W~CP~H-~C~vC~k~s----l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
....|.|... .|.+|+... ++.|+.|+.+||..|+.+ ++..+|.+.|||+.|...
T Consensus 7 ~~s~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~P-pl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 7 GHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLP-PLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSS-CCSSCCSSCCCCHHHHHH
T ss_pred CCchhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCC-CcccCCCCCcCCccCcCc
Confidence 4567999877 799999875 899999999999999984 567899999999999754
No 52
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.00 E-value=1.8e-06 Score=67.13 Aligned_cols=44 Identities=23% Similarity=0.546 Sum_probs=37.6
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.|.+|+..+ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|..
T Consensus 13 ~C~vC~~~g~ll~CD~C~~~fH~~Cl~p-~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 13 YCEVCQQGGEIILCDTCPRAYHMVCLDP-DMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SCTTTSCCSSEEECSSSSCEEEHHHHCT-TCCSCCCSSCCCTTGGG
T ss_pred CCccCCCCCcEEECCCCChhhhhhccCC-CCCCCCCCceECccccc
Confidence 466888765 889999999999999985 46778899999999975
No 53
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.00 E-value=1.6e-06 Score=68.18 Aligned_cols=43 Identities=16% Similarity=0.566 Sum_probs=36.9
Q ss_pred cccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 171 CSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 171 C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
|.+|+..+ ++.|+.|+.+||..|+.+ ++..+|.+.|+|+.|..
T Consensus 11 C~vC~~~g~ll~CD~C~~~fH~~Cl~p-pl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 11 CAVCRDGGELICCDGCPRAFHLACLSP-PLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp BSSSSCCSSCEECSSCCCEECTTTSSS-CCSSCCSSCCCCHHHHH
T ss_pred CccCCCCCCEEEcCCCChhhcccccCC-CcCcCCCCCeECccccC
Confidence 46788765 899999999999999984 56788899999999975
No 54
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.83 E-value=8.1e-06 Score=76.46 Aligned_cols=45 Identities=18% Similarity=0.538 Sum_probs=39.1
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.|.+|+.++ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|...
T Consensus 9 ~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p-~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 9 WCAVCQNGGDLLCCEKCPKVFHLTCHVP-TLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp SBTTTCCCEEEEECSSSSCEECTTTSSS-CCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCceEEcCCCCCccCCccCCC-CCCCCCCCCEEeCceeCc
Confidence 367888876 889999999999999984 567889999999999875
No 55
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=6e-06 Score=66.19 Aligned_cols=46 Identities=33% Similarity=0.786 Sum_probs=36.0
Q ss_pred ccccccccccc--cCceeecCCCCCC-CcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD--GGSLVLCDRKGCP-KAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d--GGeLv~CD~~gCP-raYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
....+|+ |+. .|.||.||.-.|| .+||..||++.. .+.+.|+||.|
T Consensus 4 ~~~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~---~p~~~w~Cp~C 52 (70)
T 1x4i_A 4 GSSGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLTE---APKGKWYCPQC 52 (70)
T ss_dssp SCCCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCSS---CCSSCCCCHHH
T ss_pred CCCeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccCc---CCCCCEECCCC
Confidence 4556786 874 6799999954466 699999999875 46899999965
No 56
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.75 E-value=1.2e-05 Score=74.87 Aligned_cols=45 Identities=24% Similarity=0.700 Sum_probs=39.8
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.|.+|+.++ ++.|+.|+++||..|+.+ ++..+|.+.|+|+.|...
T Consensus 4 ~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p-~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 4 ICRVCQKPGDLVMCNQCEFCFHLDCHLP-ALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CBTTTCCCSSCCCCTTTCCBCCSTTSTT-CCSSCCCTTCCTTTTSCS
T ss_pred cCccCCCCCceeECCCCCchhccccCCC-CcccCCCCCCCCcCccCC
Confidence 589999877 889999999999999984 567889999999999865
No 57
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.69 E-value=3.9e-06 Score=76.04 Aligned_cols=48 Identities=23% Similarity=0.441 Sum_probs=36.5
Q ss_pred ccccccccccccc----CceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 119 TEEEDVCFICFDG----GSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 119 ~~ned~CfVC~dG----GeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
..+..+| +|+.+ |.++.|| .|+++||..|++.........+.|+||.|
T Consensus 5 ~~~~~~C-~C~~~~~~~~~mi~Cd--~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C 56 (174)
T 2ri7_A 5 SDTKLYC-ICKTPEDESKFYIGCD--RCQNWYHGRCVGILQSEAELIDEYVCPQC 56 (174)
T ss_dssp --CCEET-TTTEECCTTSCEEECT--TTCCEEEHHHHTCCHHHHTTCSSCCCHHH
T ss_pred CCCCcEe-eCCCCCCCCCCEeECC--CCCchhChhhcCCchhhccCccCeecCCC
Confidence 3566789 99864 5699999 79999999999986543234689999854
No 58
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.65 E-value=9.3e-06 Score=67.42 Aligned_cols=47 Identities=19% Similarity=0.477 Sum_probs=38.7
Q ss_pred cccccccCC------ceeeccCCCccccccccCCCccc----cccCCeeecCCCCcch
Q 041992 169 HICSICEKA------SYYMCYTCTYSLCKGCTKGADYY----SLRGNKGFCGICMRTI 216 (473)
Q Consensus 169 H~C~vC~k~------sl~~C~~Cp~AyH~~CL~~~~~~----sv~~~kwfC~~C~~~~ 216 (473)
-.|.+|+.. .++.|+.|+.+||..|+.++ +. .++.+.|||..|....
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp-l~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ-VTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC-CCHHHHHCTTCCCCCHHHHHHH
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc-ccccccCCCCCCeeCccccchh
Confidence 368899876 38999999999999999854 44 3789999999998654
No 59
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.63 E-value=1.4e-05 Score=61.91 Aligned_cols=49 Identities=18% Similarity=0.398 Sum_probs=37.7
Q ss_pred cccccccccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 119 TEEEDVCFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 119 ~~ned~CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
..+..+|.+|+. ++.+|.|| .|..+||..|++...........|+||.|
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C 55 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCD--LCEMWFHGKCVKITPARAEHIKQYKCPSC 55 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECS--SSCCEEETTTTTCCTTGGGGCSSCCCHHH
T ss_pred CCCCCCCCCCCCccCCCCCEEEcc--CCCCCCCccccCcChhHhcCCCcEECCCC
Confidence 356678988975 46899999 79999999999987643222478999854
No 60
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.57 E-value=1.8e-05 Score=66.29 Aligned_cols=53 Identities=23% Similarity=0.709 Sum_probs=41.8
Q ss_pred CCCcccccccccccc--ccCceeecCCCCCCCcccccccCccc--------c---cCCCCCceeecCc
Q 041992 115 GRRKTEEEDVCFICF--DGGSLVLCDRKGCPKAYHPACIKREE--------S---FFRSKAKWNCGWH 169 (473)
Q Consensus 115 ~~~~~~ned~CfVC~--dGGeLv~CD~~gCPraYH~~CL~p~~--------~---~~~p~g~W~CP~H 169 (473)
+++...+|+.|.||. ..++++.|. .|.|+||..||.+.. . .-.+...|.|+.|
T Consensus 8 ~~e~~~~D~~C~VC~~~t~~~l~pCR--vC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~C 73 (89)
T 1wil_A 8 PREPVVNDEMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYC 73 (89)
T ss_dssp SCCCCCCSCCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTT
T ss_pred cccCCCCCcccCccccccccceeccc--cccccccHhhcccccccccHHHHHHHHccCCCCCcccccc
Confidence 466778999999998 678999998 799999999998741 0 0125678999854
No 61
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.57 E-value=1.7e-05 Score=61.63 Aligned_cols=44 Identities=23% Similarity=0.615 Sum_probs=35.8
Q ss_pred ccccccCC-----c-eeeccCCCccccccccCCCcccc--c-cCCeeecCCCCc
Q 041992 170 ICSICEKA-----S-YYMCYTCTYSLCKGCTKGADYYS--L-RGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~-----s-l~~C~~Cp~AyH~~CL~~~~~~s--v-~~~kwfC~~C~~ 214 (473)
.|.+|+.. . ++.|+.|+.+||..|+.++ +.. + +.+.|||..|..
T Consensus 8 ~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~-l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 8 VCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH-IDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC-CCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc-ccccccCCCCCEECCCCcC
Confidence 57788875 2 8999999999999999854 443 4 789999999865
No 62
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.43 E-value=2.8e-05 Score=64.72 Aligned_cols=43 Identities=21% Similarity=0.650 Sum_probs=35.9
Q ss_pred ccccccCC------ceeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 170 ICSICEKA------SYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~------sl~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.|.+|+.. .++.|+.|+.+||..|+..+ .+|.+.|||..|...
T Consensus 27 ~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~---~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 27 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVP---YIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCS---SCCSSCCCCHHHHHH
T ss_pred cCCcCCCCCCCCCCCEEECCCCCchhhcccCCCC---ccCCCceECccccCc
Confidence 46788876 38999999999999999854 378899999999753
No 63
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.38 E-value=3e-05 Score=62.30 Aligned_cols=42 Identities=21% Similarity=0.653 Sum_probs=35.6
Q ss_pred ccccccCC------ceeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 170 ICSICEKA------SYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~------sl~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.|.+|++. .++.|+.|+.+||..|+..+ .+|.+.|||..|..
T Consensus 18 ~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~---~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 18 VCSICMDGESQNSNVILFCDMCNLAVHQECYGVP---YIPEGQWLCRHCLQ 65 (71)
T ss_dssp SCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS---SCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCccccccCCCC---cCCCCCcCCccCcC
Confidence 47789876 38999999999999999854 47889999999864
No 64
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.28 E-value=6.1e-05 Score=60.97 Aligned_cols=49 Identities=18% Similarity=0.429 Sum_probs=37.0
Q ss_pred ccccccccccc---cCceeecCCCCCCCcccccccCcccccC----CCCCceeecCc
Q 041992 120 EEEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFF----RSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~----~p~g~W~CP~H 169 (473)
....+| +|+. .|.+|.||+..|..+||..|++...... .....|+||.|
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C 69 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEIC 69 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHH
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCC
Confidence 355678 6986 4799999976799999999999876421 12468999853
No 65
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.21 E-value=0.00011 Score=59.47 Aligned_cols=47 Identities=19% Similarity=0.394 Sum_probs=35.6
Q ss_pred ccccccccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
....+| +|+. ++.+|.|| .|..+||..|++...........|+||.|
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C 60 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCVGIEEENAVDIDIYHCPDC 60 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHHTCCHHHHTTCSBBCCTTT
T ss_pred CCccEE-EcCCccCCCCceEEcC--CCCCcEEeeecCcccccccCCCeEECCCc
Confidence 445567 6875 46899999 79999999999987643223478999854
No 66
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.07 E-value=8.6e-05 Score=67.18 Aligned_cols=46 Identities=24% Similarity=0.581 Sum_probs=37.4
Q ss_pred cccccccCCc-eeeccCCCccccccccCCCc----ccc--ccCCeeecCCCCc
Q 041992 169 HICSICEKAS-YYMCYTCTYSLCKGCTKGAD----YYS--LRGNKGFCGICMR 214 (473)
Q Consensus 169 H~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~----~~s--v~~~kwfC~~C~~ 214 (473)
..|.+|+..+ ++.|+.||++||..|+.++. +.. .+.+.|.|..|..
T Consensus 64 d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 64 EQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 3789999987 89999999999999998432 123 3789999999974
No 67
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.01 E-value=0.00028 Score=60.98 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=35.6
Q ss_pred ccccccCCc-eeecc--CCCccccccccCCCccccccCCeeecCCCCc
Q 041992 170 ICSICEKAS-YYMCY--TCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~--~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.|.+|+..+ ++.|+ .||++||..|+. +..+|.+.|+|+.|..
T Consensus 17 ~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~---L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 17 YCFQCGDGGELVMCDKKDCPKAYHLLCLN---LTQPPYGKWECPWHQC 61 (107)
T ss_dssp SCTTTCCCSEEEECCSTTCCCEECTGGGT---CSSCCSSCCCCGGGBC
T ss_pred CCCcCCCCCcEeEECCCCCCcccccccCc---CCcCCCCCEECCCCCC
Confidence 467888766 78999 899999999997 6778899999997764
No 68
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=96.99 E-value=0.00012 Score=62.71 Aligned_cols=46 Identities=28% Similarity=0.643 Sum_probs=35.5
Q ss_pred ccccccccc----CceeecCCCCCCCcccccccCccccc---C--CCCCceeecCc
Q 041992 123 DVCFICFDG----GSLVLCDRKGCPKAYHPACIKREESF---F--RSKAKWNCGWH 169 (473)
Q Consensus 123 d~CfVC~dG----GeLv~CD~~gCPraYH~~CL~p~~~~---~--~p~g~W~CP~H 169 (473)
..|.+|+.. |+++.||. .|..+||..|+++.... + .+...|+||.|
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd-~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C 58 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEA-SCQKWFHRECTGMTESAYGLLTTEASAVWACDLC 58 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTT-TTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHH
T ss_pred CCCCCCCCccCCCCCEEEecC-CcccccccccCCcCHHHHHhhccCCCCCEECccc
Confidence 469999865 68999973 69999999999988521 0 25689999853
No 69
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.96 E-value=0.00026 Score=56.23 Aligned_cols=46 Identities=22% Similarity=0.494 Sum_probs=35.2
Q ss_pred cccccccccccc---cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 119 TEEEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 119 ~~ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.....+| +|+. ++.+|.|| .|..+||..|+++.... ..+.|+||.|
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvgi~~~~--~~~~~~C~~C 64 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECN--ECHTWIHLSCAKIRKSN--VPEVFVCQKC 64 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECT--TTCCEEETTTTTCCTTS--CCSSCCCHHH
T ss_pred CCCceEe-ECCCcCCCCCEEECC--CCCccccccccCcCccc--CCCcEECCCC
Confidence 3445578 7975 34699999 79999999999998643 3478999854
No 70
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.91 E-value=0.00031 Score=55.82 Aligned_cols=47 Identities=26% Similarity=0.444 Sum_probs=35.5
Q ss_pred ccccccccccccc---C-ceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 119 TEEEDVCFICFDG---G-SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 119 ~~ned~CfVC~dG---G-eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.....+| +|+.. | .+|.|| .|..+||..|++..... .....|+||.|
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg~~~~~-~~~~~~~C~~C 63 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIGINNAD-ALPSKFLCFRC 63 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECS--SSCEEEETTTTTCCTTS-CCCSCCCCHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECC--CCCCccCCeeeccCccc-cCCCcEECCCc
Confidence 4455678 59853 4 699999 79999999999987532 23578999854
No 71
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.87 E-value=0.00014 Score=58.30 Aligned_cols=49 Identities=22% Similarity=0.483 Sum_probs=36.1
Q ss_pred ccccccccccccc---cCceeecCCCCCCCcccccccCcccccC----CCCCceeecCc
Q 041992 118 KTEEEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFF----RSKAKWNCGWH 169 (473)
Q Consensus 118 ~~~ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~----~p~g~W~CP~H 169 (473)
.+.+..+| +|+. ++.+|.|| .|..+||..|++...... .....|+||.|
T Consensus 12 ~d~~~~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C 67 (76)
T 1wem_A 12 YDPNALYC-ICRQPHNNRFMICCD--RCEEWFHGDCVGISEARGRLLERNGEDYICPNC 67 (76)
T ss_dssp CCTTCCCS-TTCCCCCSSCEEECS--SSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHH
T ss_pred cCCCCCEE-ECCCccCCCCEEEeC--CCCCcEeCeEEccchhhhhhccCCCCeEECcCC
Confidence 34456778 6986 46899999 799999999999875310 02478999854
No 72
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=96.83 E-value=0.0004 Score=55.24 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=36.6
Q ss_pred CCceeecCcccccccCC----ceeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 161 KAKWNCGWHICSICEKA----SYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 161 ~g~W~CP~H~C~vC~k~----sl~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
...++|+ +|++. .++.|+.|+..||..|+..+ ...++.+.|+|+.|...
T Consensus 16 ~~~~~C~-----~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~-~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 16 NQIWICP-----GCNKPDDGSPMIGCDDCDDWYHWPCVGIM-AAPPEEMQWFCPKCANK 68 (75)
T ss_dssp CEEECBT-----TTTBCCSSCCEEECSSSSSEEEHHHHTCS-SCCCSSSCCCCTTTHHH
T ss_pred CCCcCCC-----CCCCCCCCCCEEEcCCCCcccccccCCCC-ccCCCCCCEEChhccCc
Confidence 3445554 67765 27899999999999999854 34455689999999754
No 73
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.54 E-value=0.0012 Score=56.25 Aligned_cols=85 Identities=19% Similarity=0.339 Sum_probs=50.5
Q ss_pred ccccccccCceeecCCCCCCCcccccccCcccccCCCCCceee-----cCc----ccccccCC--------ceeeccCCC
Q 041992 124 VCFICFDGGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNC-----GWH----ICSICEKA--------SYYMCYTCT 186 (473)
Q Consensus 124 ~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~C-----P~H----~C~vC~k~--------sl~~C~~Cp 186 (473)
+|.+|+.. -|+ .|...||..|++++...-..-..|.| |.+ .|..|... .++.|..|.
T Consensus 9 ~C~~C~~~----~C~--~C~~c~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~~m~~C~~C~ 82 (117)
T 4bbq_A 9 KCKACVQG----ECG--VCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICN 82 (117)
T ss_dssp CSHHHHSC----CCS--CSHHHHHSGGGTSCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGGSCEEETTTC
T ss_pred cCcCcCCc----CCC--CCCCCcCCcccCCCCccccchhheeeccccccccccccccCcccccccccccCcceEEeeecC
Confidence 46666654 388 79999999999876421011111222 211 22233321 167899999
Q ss_pred ccccccccCCCccccc---cCCeeecCCCCc
Q 041992 187 YSLCKGCTKGADYYSL---RGNKGFCGICMR 214 (473)
Q Consensus 187 ~AyH~~CL~~~~~~sv---~~~kwfC~~C~~ 214 (473)
..||..|+....-..+ ..+.|+|+.|..
T Consensus 83 ~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 83 EIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp CEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred CeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 9999999985321112 235699999975
No 74
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.54 E-value=0.00049 Score=51.66 Aligned_cols=43 Identities=21% Similarity=0.448 Sum_probs=32.1
Q ss_pred cccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 125 CFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 125 CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
|.+|+. ++.+|.||+ .|..+||..|++...... ....|+||.|
T Consensus 5 cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cvgl~~~~~-~~~~~~C~~C 51 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDG-GCDEWFHQVCVGVSPEMA-ENEDYICINC 51 (52)
T ss_dssp CTTCCCCCCTTCCEEECTT-TTCCEEETTTTTCCHHHH-HHSCCCCSCC
T ss_pred CCCCcCccCCCCcEEEeCC-CCCccCcccccCCCcccc-CCCCEECCCC
Confidence 455653 456999995 599999999999875421 2378999975
No 75
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.44 E-value=0.00032 Score=55.40 Aligned_cols=49 Identities=27% Similarity=0.603 Sum_probs=36.1
Q ss_pred cccccccccccc----CceeecCCCCCCCcccccccCccccc-----CCCCCceeecCc
Q 041992 120 EEEDVCFICFDG----GSLVLCDRKGCPKAYHPACIKREESF-----FRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~dG----GeLv~CD~~gCPraYH~~CL~p~~~~-----~~p~g~W~CP~H 169 (473)
.....|.+|+.. ..+|.||+ +|.++||..|++..... ..+.+.|+||.|
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C 63 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEA-SCQKWFHRICTGMTETAYGLLTAEASAVWGCDTC 63 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHH
T ss_pred CCcCcCccCCCccCCCCCeEeccc-CccccCchhccCCCHHHHHHhhccCCCcEECcCc
Confidence 445679999864 36999995 69999999999998631 125679999854
No 76
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.40 E-value=0.0005 Score=55.12 Aligned_cols=45 Identities=22% Similarity=0.488 Sum_probs=33.1
Q ss_pred ccccccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 122 EDVCFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 122 ed~CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.-+| +|+. ++.+|.|| .|..+||..|++...........|+||.|
T Consensus 10 ~~yC-iC~~~~~~~~~MI~Cd--~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C 58 (75)
T 3kqi_A 10 PVYC-VCRLPYDVTRFMIECD--ACKDWFHGSCVGVEEEEAPDIDIYHCPNC 58 (75)
T ss_dssp CEET-TTTEECCTTSCEEECT--TTCCEEEHHHHTCCTTTGGGBSSCCCHHH
T ss_pred eeEE-ECCCcCCCCCCEEEcC--CCCCCEecccccccccccCCCCEEECCCC
Confidence 3456 5875 35899999 79999999999988643222367999843
No 77
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.31 E-value=0.00048 Score=72.79 Aligned_cols=47 Identities=21% Similarity=0.487 Sum_probs=35.3
Q ss_pred ccccccccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 120 EEEDVCFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 120 ~ned~CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
....+| +|+. +|.+|.|| .|..+||..|++.........+.|+||.|
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C 85 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECD--ICKDWFHGSCVGVEEHHAVDIDLYHCPNC 85 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBT--TTCCEEEHHHHTCCGGGGGGEEEBCCHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEcc--CCCCceeeeecCcCcccccCCCEEECCCC
Confidence 444567 6975 56899999 79999999999987643222368999865
No 78
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=96.29 E-value=0.0025 Score=51.08 Aligned_cols=40 Identities=20% Similarity=0.482 Sum_probs=32.1
Q ss_pred cccCC---ceeeccC--CC-ccccccccCCCccccccCCeeecCCCCcc
Q 041992 173 ICEKA---SYYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 173 vC~k~---sl~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
+|++. .++.|+. |+ ..||..|+. +..+|.+.|||+.|...
T Consensus 20 ~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg---l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 20 LCHQVSYGEMIGCDNPDCSIEWFHFACVG---LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp TTCCCSCSSEECCSCSSCSCCCEETTTTT---CSSCCSSCCCCTTTSSC
T ss_pred ECCCCCCCCEeEeeCCCCCCccEecccCC---cCcCCCCCEECCCCCcc
Confidence 46663 3789999 98 699999998 56677789999999763
No 79
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.24 E-value=0.0015 Score=51.41 Aligned_cols=48 Identities=19% Similarity=0.430 Sum_probs=33.9
Q ss_pred cccccccccc---cCceeecCCCCCCCcccccccCcccccC---CCCCceeecCc
Q 041992 121 EEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREESFF---RSKAKWNCGWH 169 (473)
Q Consensus 121 ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~---~p~g~W~CP~H 169 (473)
..-+| +|+. .|.+|.||...|..+||..|++...... .....|+||.|
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~C 62 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELC 62 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHH
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCc
Confidence 44567 5864 5799999944599999999999865321 12247999854
No 80
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=96.22 E-value=0.0031 Score=53.13 Aligned_cols=46 Identities=15% Similarity=0.331 Sum_probs=34.2
Q ss_pred cCcccccccCCc-eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 167 GWHICSICEKAS-YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 167 P~H~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
-.|+|..+...+ ++.|..|+..||..|+..+ ...+| +.|+|+.|..
T Consensus 29 vrCiC~~~~~~~~mi~Cd~C~~w~H~~C~~~~-~~~~p-~~w~C~~C~~ 75 (98)
T 2lv9_A 29 TRCICGFTHDDGYMICCDKCSVWQHIDCMGID-RQHIP-DTYLCERCQP 75 (98)
T ss_dssp CCCTTSCCSCSSCEEEBTTTCBEEETTTTTCC-TTSCC-SSBCCTTTSS
T ss_pred EEeECCCccCCCcEEEcCCCCCcCcCcCCCCC-ccCCC-CCEECCCCcC
Confidence 344566665444 7899999999999999853 44555 4799999974
No 81
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.16 E-value=0.00056 Score=61.84 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=55.6
Q ss_pred CCCceeecCcccccccC--CceeeccCCCccccccccCCCccccccCCeeecCCCCcchhhh------------------
Q 041992 160 SKAKWNCGWHICSICEK--ASYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIMLI------------------ 219 (473)
Q Consensus 160 p~g~W~CP~H~C~vC~k--~sl~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~~~i------------------ 219 (473)
....++| .|..-.. ...+.|+.|+.-||..|+.-........+.|+|+.|.......
T Consensus 5 ~~~~~~C---~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~l~~~~~~~l~~il 81 (174)
T 2ri7_A 5 SDTKLYC---ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVL 81 (174)
T ss_dssp --CCEET---TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHHHHTTTSBCCHHHHHHHHHHH
T ss_pred CCCCcEe---eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhccccccccCCHHHHHHHHHHH
Confidence 3455677 3333322 1278999999999999997433222236799999998643211
Q ss_pred hccCCCCCCceeeecCCCCccchhhHHHHHHhhhccCCChhh
Q 041992 220 ENCAPGNQEKVVVDFDDKTSWEYLFKVYWIFLKEKLSLTLDE 261 (473)
Q Consensus 220 E~~~~~dseg~~VDf~D~~~~e~lfK~Yw~~iK~~~~Lt~~~ 261 (473)
...... .....|..+-.-. .+.+|+.+||.+++|+...
T Consensus 82 ~~l~~~---~~~~~F~~pv~~~-~~pdY~~~I~~PmdL~tI~ 119 (174)
T 2ri7_A 82 RSLQAH---KMAWPFLEPVDPN-DAPDYYGVIKEPMDLATME 119 (174)
T ss_dssp HHHHTS---GGGTTTSSCCCTT-TCHHHHHHCSSCCCHHHHH
T ss_pred HHHHhh---hhhhhhhcCCCcc-cCCchHHHhCCcCCHHHHH
Confidence 111000 1122354443222 4789999999999886544
No 82
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.04 E-value=0.001 Score=59.30 Aligned_cols=46 Identities=24% Similarity=0.626 Sum_probs=36.9
Q ss_pred ccccccCCc-eeeccCCCccccccccCCCc----cccc--cCCeeecCCCCcc
Q 041992 170 ICSICEKAS-YYMCYTCTYSLCKGCTKGAD----YYSL--RGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~s-l~~C~~Cp~AyH~~CL~~~~----~~sv--~~~kwfC~~C~~~ 215 (473)
.|.+|+.++ ++.|+.||++||..|+.... +..+ +.+.|.|..|...
T Consensus 59 ~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 59 QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred cCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 578999887 88999999999999997421 3344 6899999999753
No 83
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.04 E-value=0.0021 Score=48.07 Aligned_cols=39 Identities=23% Similarity=0.544 Sum_probs=30.8
Q ss_pred cccc---cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 127 ICFD---GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 127 VC~d---GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
+|+. ++.+|.|| .|..+||..|++..... ....|+||.|
T Consensus 8 ~C~~~~~~~~MI~Cd--~C~~W~H~~Cvgi~~~~--~~~~~~C~~C 49 (52)
T 3o7a_A 8 FCMKPFAGRPMIECN--ECHTWIHLSCAKIRKSN--VPEVFVCQKC 49 (52)
T ss_dssp TTCCBCTTCCEEECT--TTCCEEETTTTTCCGGG--CCSSCCCHHH
T ss_pred EeCCcCCCCCEEEcC--CCCccccccccCCCccc--CCCcEECcCC
Confidence 3654 56999999 79999999999988653 2478999854
No 84
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=95.99 E-value=0.0011 Score=60.98 Aligned_cols=51 Identities=20% Similarity=0.592 Sum_probs=41.0
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCcccc-----cCCCCCceee
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREES-----FFRSKAKWNC 166 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~-----~~~p~g~W~C 166 (473)
..++..+.+|-+|++||+|++|++..|+++|-..||..-.. .......|.|
T Consensus 73 ~DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~C 128 (159)
T 3a1b_A 73 YDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNC 128 (159)
T ss_dssp BCTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCC
T ss_pred cCCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEE
Confidence 34577889999999999999999888999999999975432 1234678977
No 85
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.93 E-value=0.0043 Score=52.24 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=28.4
Q ss_pred eeeccC--CC-ccccccccCCCccccccCCeeecCCCCcc
Q 041992 179 YYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 179 l~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
++.|+. |+ ..||..|+. +...+.++|||+.|...
T Consensus 49 MI~CD~~dC~~~WfH~~CVg---l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 49 MIGCDNPDCSIEWFHFACVG---LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCCCSCSSCSCCCCCSTTTT---CSSCCCSSCCCTTTCCC
T ss_pred EeEecCCCCCCCCEecccCC---cCcCCCCCEECcCccCc
Confidence 678999 88 689999998 55667789999999753
No 86
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=95.86 E-value=0.0014 Score=50.70 Aligned_cols=39 Identities=21% Similarity=0.496 Sum_probs=31.2
Q ss_pred cccCC---ceeeccC--CC-ccccccccCCCccccccCCeeecCCCCc
Q 041992 173 ICEKA---SYYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 173 vC~k~---sl~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+|++. .++.|+. |+ ..||..|+. +..+|.+.|+|+.|..
T Consensus 14 ~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg---l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 14 LCHQVSYGEMIGCDNPDCSIEWFHFACVG---LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp TTTEECCSEEEECSCTTCSSCEEETGGGT---CSSCCSSCCCCHHHHC
T ss_pred ECCCcCCCCEEEeCCCCCCCceEehhcCC---CCcCCCCCEECcCccC
Confidence 46653 3789999 88 699999998 5667789999998864
No 87
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=95.56 E-value=0.0022 Score=49.59 Aligned_cols=39 Identities=21% Similarity=0.522 Sum_probs=30.9
Q ss_pred cccCC---ceeeccC--CC-ccccccccCCCccccccCCeeecCCCCc
Q 041992 173 ICEKA---SYYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 173 vC~k~---sl~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+|++. .++.|+. |+ ..||..|+. +...|.+.|+|+.|..
T Consensus 13 ~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg---l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 13 LCHQVSYGEMIGCDNPDCPIEWFHFACVD---LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp TTTEECCSEEEECSCTTCSSCEEETGGGT---CSSCCSSCCCCHHHHC
T ss_pred ECCCCCCCCeeEeeCCCCCCCCEecccCC---cccCCCCCEECcCccC
Confidence 56662 3789999 98 599999998 5566778999998864
No 88
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=95.35 E-value=0.0028 Score=49.48 Aligned_cols=39 Identities=18% Similarity=0.430 Sum_probs=30.8
Q ss_pred cccCC---ceeeccC--CC-ccccccccCCCccccccCCeeecCCCCc
Q 041992 173 ICEKA---SYYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 173 vC~k~---sl~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+|++. .++.|+. |+ ..||..|+. +...+.+.|+|+.|..
T Consensus 15 ~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg---l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 15 LCNQVSYGEMIGCDNEQCPIEWFHFSCVS---LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp TTTEECCSEEEECSCTTCSSCEEETGGGT---CSSCCSSCCCCHHHHT
T ss_pred ECCCCCCCCeeeeeCCCCCcccEecccCC---cCcCCCCCEECcCccc
Confidence 56663 3788999 77 899999998 4556779999999864
No 89
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=94.92 E-value=0.0099 Score=49.92 Aligned_cols=40 Identities=20% Similarity=0.516 Sum_probs=30.5
Q ss_pred cccCC---ceeeccC--CC-ccccccccCCCccccccCCeeecCC-CCcc
Q 041992 173 ICEKA---SYYMCYT--CT-YSLCKGCTKGADYYSLRGNKGFCGI-CMRT 215 (473)
Q Consensus 173 vC~k~---sl~~C~~--Cp-~AyH~~CL~~~~~~sv~~~kwfC~~-C~~~ 215 (473)
+|+.. .++.|+. |+ ..||..|+. +..++.+.|||+. |...
T Consensus 30 iC~~~~~g~MI~CD~c~C~~eWfH~~CVg---l~~~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 30 FCRNVSYGPMVACDNPACPFEWFHYGCVG---LKQAPKGKWYCSKDCKEI 76 (90)
T ss_dssp TTTCCCSSSEECCCSSSCSCSCEETTTSS---CSSCTTSCCCSSHHHHHH
T ss_pred EeCCCCCCCEEEecCCCCccccCcCccCC---CCcCCCCCccCChhhcch
Confidence 45543 3788998 55 799999998 5566778999999 8753
No 90
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=94.83 E-value=0.0042 Score=64.13 Aligned_cols=52 Identities=21% Similarity=0.599 Sum_probs=41.3
Q ss_pred CCccccccccccccccCceeecCCCCCCCcccccccCccccc-----CCCCCceeec
Q 041992 116 RRKTEEEDVCFICFDGGSLVLCDRKGCPKAYHPACIKREESF-----FRSKAKWNCG 167 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGGeLv~CD~~gCPraYH~~CL~p~~~~-----~~p~g~W~CP 167 (473)
...+..+.+|-+|++||+|++||+..|+++|-..|+..-... ......|.|=
T Consensus 87 ~D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf 143 (386)
T 2pv0_B 87 YDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCY 143 (386)
T ss_dssp BCSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCT
T ss_pred cCCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEE
Confidence 345778999999999999999998899999999999765421 1235789773
No 91
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.55 E-value=0.0033 Score=65.87 Aligned_cols=43 Identities=23% Similarity=0.514 Sum_probs=33.1
Q ss_pred ccccccc----cCceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 124 VCFICFD----GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 124 ~CfVC~d----GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
+| +|+. +|.+|.|| .|..+||..|++.........+.|+||.|
T Consensus 7 yC-iC~~~~d~~~~MIqCD--~C~~WfH~~CVgi~~~~~~~~~~y~C~~C 53 (447)
T 3kv4_A 7 YC-LCRLPYDVTRFMIECD--MCQDWFHGSCVGVEEEKAADIDLYHCPNC 53 (447)
T ss_dssp ET-TTTEECCTTSCEEECT--TTCCEEEHHHHTCCHHHHTTEEECCCHHH
T ss_pred EE-eCCCcCCCCCCeEEcC--CCCcccccccCCcCcccccCCCEEECCCC
Confidence 45 5875 47899999 79999999999987643223478999965
No 92
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=94.17 E-value=0.0079 Score=56.18 Aligned_cols=45 Identities=16% Similarity=0.502 Sum_probs=31.7
Q ss_pred ccccccccc---C----ceeecCCCCCCCcccccccCccccc------CCCCCceeecCc
Q 041992 123 DVCFICFDG---G----SLVLCDRKGCPKAYHPACIKREESF------FRSKAKWNCGWH 169 (473)
Q Consensus 123 d~CfVC~dG---G----eLv~CD~~gCPraYH~~CL~p~~~~------~~p~g~W~CP~H 169 (473)
.+|.+|+.. + .+|.|| .|..+||..|+++.... .+....|+||.|
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C 60 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNC 60 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTT
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhccccCHHHHHHhhcCCCCCeeECcCC
Confidence 468888742 2 499999 79999999999986420 001236888853
No 93
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=94.05 E-value=0.018 Score=48.39 Aligned_cols=52 Identities=25% Similarity=0.635 Sum_probs=37.6
Q ss_pred ccccccC---CceeeccCCCccccccccCCCccc-----------cccCCeeecCCCCcchhhhhc
Q 041992 170 ICSICEK---ASYYMCYTCTYSLCKGCTKGADYY-----------SLRGNKGFCGICMRTIMLIEN 221 (473)
Q Consensus 170 ~C~vC~k---~sl~~C~~Cp~AyH~~CL~~~~~~-----------sv~~~kwfC~~C~~~~~~iE~ 221 (473)
.|.+|+. ..++.|..|++.||..||....+. ......|.|..|..+-.+|..
T Consensus 17 ~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lLLtE 82 (89)
T 1wil_A 17 MCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLLLTE 82 (89)
T ss_dssp CCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSSSCC
T ss_pred ccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhhcch
Confidence 5677874 348999999999999999863111 113467999999887655544
No 94
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.66 E-value=0.02 Score=61.23 Aligned_cols=38 Identities=24% Similarity=0.372 Sum_probs=30.3
Q ss_pred cCceeecCCCCCCCcccccccCcccccCCCCCceeecCcc
Q 041992 131 GGSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHI 170 (473)
Q Consensus 131 GGeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~ 170 (473)
+..+|.|| .|..+||..|++.........+.|+||.|.
T Consensus 55 ~~~mI~CD--~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~ 92 (528)
T 3pur_A 55 DFQWIGCD--SCQTWYHFLCSGLEQFEYYLYEKFFCPKCV 92 (528)
T ss_dssp TTSEEECT--TTCCEEEGGGTTCCGGGTTTEEECCCTTTH
T ss_pred CCCEEECC--CCCcCCCCcCCCCChhHhcCCCeEECcCCc
Confidence 34799999 799999999999886432345889999863
No 95
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=91.50 E-value=0.02 Score=52.69 Aligned_cols=85 Identities=19% Similarity=0.483 Sum_probs=56.5
Q ss_pred ccccccccccccC--------ceeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccCCc-eeecc--CCCcc
Q 041992 120 EEEDVCFICFDGG--------SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS-YYMCY--TCTYS 188 (473)
Q Consensus 120 ~ned~CfVC~dGG--------eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k~s-l~~C~--~Cp~A 188 (473)
.-++.|..|+.-- +.++|. .|-..|+..-...+. +|. +..|..|+.++ ++.|. .|+++
T Consensus 34 ~~e~~Ct~CG~~~~~~~HPlf~v~lC~--~Ck~~y~e~~f~~De-----DG~----~~yC~wC~~Gg~l~~Cdn~~C~r~ 102 (159)
T 3a1b_A 34 NIEDICISCGSLNVTLEHPLFVGGMCQ--NCKNCFLECAYQYDD-----DGY----QSYCTICCGGREVLMCGNNNCCRC 102 (159)
T ss_dssp CGGGSBTTTCCSCCCEECSSBSSEECH--HHHHHHHHHTTCBCT-----TSS----BSSCTTTSCCSEEEECSSTTTCCE
T ss_pred CccCcccCCCCcCccccCCCccchhhH--HHHHHHhhcccccCC-----CCC----cceeeEecCCCeEEeeCCCCCCCc
Confidence 3588999997532 345666 576666544333332 111 34677888876 89998 89999
Q ss_pred ccccccCCC----cccc-ccCCeeecCCCCcc
Q 041992 189 LCKGCTKGA----DYYS-LRGNKGFCGICMRT 215 (473)
Q Consensus 189 yH~~CL~~~----~~~s-v~~~kwfC~~C~~~ 215 (473)
||..|+.-. .+.. +..+.|.|..|...
T Consensus 103 FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 103 FCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp EEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred hhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 999998631 1222 34678999999853
No 96
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=91.48 E-value=0.061 Score=41.28 Aligned_cols=49 Identities=18% Similarity=0.373 Sum_probs=33.9
Q ss_pred CCceeecCcccccccCC-----ceeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 161 KAKWNCGWHICSICEKA-----SYYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 161 ~g~W~CP~H~C~vC~k~-----sl~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
...++|| +|++. ..+.|+.|..=||..|+.-..........|+|+.|..
T Consensus 4 ~e~~~C~-----~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 4 GSSGQCG-----ACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SSCCCCS-----SSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCC-----CCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 3445665 56654 2678999999999999985432211247899999975
No 97
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=90.98 E-value=0.023 Score=58.69 Aligned_cols=85 Identities=21% Similarity=0.495 Sum_probs=55.7
Q ss_pred ccccccccccccC--------ceeecCCCCCCCcccccccCcccccCCCCCceeecCcccccccCCc-eeecc--CCCcc
Q 041992 120 EEEDVCFICFDGG--------SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWHICSICEKAS-YYMCY--TCTYS 188 (473)
Q Consensus 120 ~ned~CfVC~dGG--------eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H~C~vC~k~s-l~~C~--~Cp~A 188 (473)
.-++.|..|+.-. +...|. .|-..|+..-...+. +.+ +..|..|+.++ ++.|. .|+++
T Consensus 48 ~~e~~C~~CG~~~~~~~HPl~~v~lC~--~Ck~~y~~~~f~~D~------DG~---~~yCr~C~~Gg~l~~Cdn~~C~r~ 116 (386)
T 2pv0_B 48 NIEDICICCGSLQVHTQHPLFEGGICA--PCKDKFLDALFLYDD------DGY---QSYCSICCSGETLLICGNPDCTRC 116 (386)
T ss_dssp CGGGSBTTTCCSCCCSBCSSBSSBCCH--HHHHHHHTTTTCBCS------SSS---BCSCTTTCCCSSCEECCSTTCCCE
T ss_pred cccceeCCCCCcCccccCCCcCcchhh--HHHHHHhccCcccCC------CCC---cccceEcCCCCeEEEeCCCCCCcc
Confidence 4568899998643 345566 465566543332221 222 34788888876 89999 99999
Q ss_pred ccccccCCC----ccccc-cCCeeecCCCCcc
Q 041992 189 LCKGCTKGA----DYYSL-RGNKGFCGICMRT 215 (473)
Q Consensus 189 yH~~CL~~~----~~~sv-~~~kwfC~~C~~~ 215 (473)
||..|+.-. .+..+ ....|.|..|...
T Consensus 117 FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 117 YCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp ECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred hHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 999999631 11222 3478999999854
No 98
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=89.63 E-value=0.088 Score=44.09 Aligned_cols=37 Identities=16% Similarity=0.386 Sum_probs=27.7
Q ss_pred eeecCCCCCCCcccccccCccc------ccCCCCCceeecCcccc
Q 041992 134 LVLCDRKGCPKAYHPACIKREE------SFFRSKAKWNCGWHICS 172 (473)
Q Consensus 134 Lv~CD~~gCPraYH~~CL~p~~------~~~~p~g~W~CP~H~C~ 172 (473)
+|.|| .|-.+||..|++... ..++....|.||.|...
T Consensus 2 mi~c~--~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCG--KCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCS--CCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccc--cCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 78999 799999999999874 22233557889876543
No 99
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.37 E-value=0.089 Score=41.87 Aligned_cols=49 Identities=16% Similarity=0.283 Sum_probs=33.5
Q ss_pred CCceeecCcccccccCCceeeccCC--C-ccccccccCCCccccccCCeeecCCCCcc
Q 041992 161 KAKWNCGWHICSICEKASYYMCYTC--T-YSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 161 ~g~W~CP~H~C~vC~k~sl~~C~~C--p-~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
....+|. |.......++.|+.| | .-||..|+. +...+.+.|+|+.|...
T Consensus 4 ~~~~yC~---C~~~~~g~MI~CD~cdC~~~WfH~~Cvg---l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 4 GSSGYCI---CNQVSYGEMVGCDNQDCPIEWFHYGCVG---LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp SCCCCST---TSCCCCSSEECCSCTTCSCCCEEHHHHT---CSSCCSSCCCCHHHHHH
T ss_pred CCCeEEE---cCCCCCCCEeEeCCCCCCccCCcccccc---cCcCCCCCEECCCCCcc
Confidence 3445662 333322347889985 3 689999998 44567889999999754
No 100
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=89.26 E-value=0.099 Score=44.51 Aligned_cols=46 Identities=20% Similarity=0.488 Sum_probs=33.3
Q ss_pred ccccccCC-----ceeecc-CCCccccccccCCCcc--cc---ccCCeeecCCCCcc
Q 041992 170 ICSICEKA-----SYYMCY-TCTYSLCKGCTKGADY--YS---LRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~-----sl~~C~-~Cp~AyH~~CL~~~~~--~s---v~~~kwfC~~C~~~ 215 (473)
.|.+|++. ..+.|. .|..=||..|+.-... .. -+...|+|+.|...
T Consensus 5 ~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 5 PCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp BCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 45578876 267787 9999999999985321 11 24579999999864
No 101
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=87.89 E-value=0.18 Score=40.41 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=28.1
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.+.|+.|..=||..|+.-..........|+|+.|...
T Consensus 27 MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 27 MIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp EEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred eEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 6789999999999999853322222478999999864
No 102
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=87.71 E-value=0.22 Score=42.05 Aligned_cols=35 Identities=23% Similarity=0.558 Sum_probs=26.4
Q ss_pred ceeecCCCCCCCcccccccCcccccC---CCCCceeecCc
Q 041992 133 SLVLCDRKGCPKAYHPACIKREESFF---RSKAKWNCGWH 169 (473)
Q Consensus 133 eLv~CD~~gCPraYH~~CL~p~~~~~---~p~g~W~CP~H 169 (473)
.|+.|+ .|..+||..|+++..... .....|.||.|
T Consensus 74 ~m~~C~--~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C 111 (117)
T 4bbq_A 74 KLMECC--ICNEIVHPGCLQMDGEGLLNEELPNCWECPKC 111 (117)
T ss_dssp SCEEET--TTCCEECGGGCCSCCCCEECSSSSSEEECTTT
T ss_pred ceEEee--ecCCeEECCCCCCCccccccccCCCCeECCCC
Confidence 488999 799999999999864321 23456999964
No 103
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=87.44 E-value=0.22 Score=37.05 Aligned_cols=44 Identities=14% Similarity=0.323 Sum_probs=30.7
Q ss_pred cccccccCCc-----eeecc-CCCccccccccCCCccccccCCeeecCCCC
Q 041992 169 HICSICEKAS-----YYMCY-TCTYSLCKGCTKGADYYSLRGNKGFCGICM 213 (473)
Q Consensus 169 H~C~vC~k~s-----l~~C~-~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~ 213 (473)
|.|.+|++.. .+.|+ .|..=||..|+.-... ......|+|+.|.
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~-~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPE-MAENEDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHH-HHHHSCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCcc-ccCCCCEECCCCC
Confidence 3466666642 67899 8999999999984322 2223789999884
No 104
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=86.09 E-value=0.12 Score=40.73 Aligned_cols=43 Identities=23% Similarity=0.463 Sum_probs=30.9
Q ss_pred cccccCCc-----eeecc-CCCccccccccCCCcc--cc---ccCCeeecCCCC
Q 041992 171 CSICEKAS-----YYMCY-TCTYSLCKGCTKGADY--YS---LRGNKGFCGICM 213 (473)
Q Consensus 171 C~vC~k~s-----l~~C~-~Cp~AyH~~CL~~~~~--~s---v~~~kwfC~~C~ 213 (473)
|.+|++.- .+.|+ .|..=||..|+.-... .. -+...|+|+.|.
T Consensus 11 C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 11 CGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 44777752 67899 9999999999985321 11 245689999885
No 105
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=85.68 E-value=0.24 Score=39.16 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=29.9
Q ss_pred cccCCc----eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 173 ICEKAS----YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 173 vC~k~s----l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+|++.. .+.|+.|..=||..|+.-... .+ .+.|+|+.|..
T Consensus 23 iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~-~~-~~~~~C~~C~~ 66 (68)
T 3o70_A 23 FCMKPFAGRPMIECNECHTWIHLSCAKIRKS-NV-PEVFVCQKCRD 66 (68)
T ss_dssp TTCCCCTTCCEEECTTTCCEEETTTTTCCTT-SC-CSSCCCHHHHT
T ss_pred ECCCcCCCCCEEECCCCCccccccccCcCcc-cC-CCcEECCCCCC
Confidence 566542 678999999999999985432 33 36899998864
No 106
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=85.19 E-value=0.29 Score=38.57 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=27.3
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.+.|..|..=||..|+.-..... ....|+|+.|..
T Consensus 31 mI~Cd~C~~W~H~~Cvg~~~~~~-~~~~~~C~~C~~ 65 (72)
T 1wee_A 31 MLACDGCGVWHHTRCIGINNADA-LPSKFLCFRCIE 65 (72)
T ss_dssp EEECSSSCEEEETTTTTCCTTSC-CCSCCCCHHHHH
T ss_pred EEECCCCCCccCCeeeccCcccc-CCCcEECCCccC
Confidence 67899999999999998543222 347899999975
No 107
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=82.99 E-value=0.58 Score=43.75 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=21.1
Q ss_pred cccccccccC----ceeecCCCCCCCcccccccCcccc
Q 041992 123 DVCFICFDGG----SLVLCDRKGCPKAYHPACIKREES 156 (473)
Q Consensus 123 d~CfVC~dGG----eLv~CD~~gCPraYH~~CL~p~~~ 156 (473)
.+|. |+..| .++.|+ .|-++||..|+.....
T Consensus 6 ~yCY-CG~~~~~~~~mLqC~--~C~qWFH~~Cl~~~~~ 40 (177)
T 3rsn_A 6 GSVD-EENGRQLGEVELQCG--ICTKWFTADTFGIDTS 40 (177)
T ss_dssp ------CTTCCTTSCEEECT--TTCCEEEGGGGTCCCT
T ss_pred eEEE-cCCCCCCCceeEeec--cccceecHHHhccccc
Confidence 4677 88766 478888 6999999999986543
No 108
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=81.98 E-value=0.42 Score=39.48 Aligned_cols=33 Identities=24% Similarity=0.806 Sum_probs=27.4
Q ss_pred ccccccccc--cCceeecCCCCCCCcccccccCcc
Q 041992 122 EDVCFICFD--GGSLVLCDRKGCPKAYHPACIKRE 154 (473)
Q Consensus 122 ed~CfVC~d--GGeLv~CD~~gCPraYH~~CL~p~ 154 (473)
.-.|.+|+. .|--|-|..+.|.++||+.|....
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 346999985 388899998899999999997643
No 109
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=80.85 E-value=1.1 Score=47.99 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=26.1
Q ss_pred eeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 180 YMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 180 ~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
+.|+.|..=||..|+.-.....-..+.|+|+.|..
T Consensus 59 I~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 59 IGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp EECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred EECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 34999999999999985432222347899999986
No 110
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=79.19 E-value=0.31 Score=38.61 Aligned_cols=43 Identities=21% Similarity=0.458 Sum_probs=30.4
Q ss_pred cccCCc----eeeccCCCccccccccCCCcccc--c--cCCeeecCCCCcc
Q 041992 173 ICEKAS----YYMCYTCTYSLCKGCTKGADYYS--L--RGNKGFCGICMRT 215 (473)
Q Consensus 173 vC~k~s----l~~C~~Cp~AyH~~CL~~~~~~s--v--~~~kwfC~~C~~~ 215 (473)
+|++.. .+.|..|..=||..|+.-..... + ....|+|+.|...
T Consensus 20 ~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 20 ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 466642 67899999999999998432110 1 3578999999753
No 111
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=78.42 E-value=0.53 Score=37.72 Aligned_cols=49 Identities=22% Similarity=0.446 Sum_probs=34.0
Q ss_pred CCCceeecCcccccccCC---c-eeecc--CCCccccccccCCCcccc----ccCCeeecCCCCc
Q 041992 160 SKAKWNCGWHICSICEKA---S-YYMCY--TCTYSLCKGCTKGADYYS----LRGNKGFCGICMR 214 (473)
Q Consensus 160 p~g~W~CP~H~C~vC~k~---s-l~~C~--~Cp~AyH~~CL~~~~~~s----v~~~kwfC~~C~~ 214 (473)
+....+| +|+.. + .+.|. .|+.=||..|+.-..... .....|+|..|..
T Consensus 13 ~~~~~~C------iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 13 PEIKVRC------VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRL 71 (78)
T ss_dssp CCCCCCC------SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred CCCCEEe------ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCc
Confidence 3455566 57765 2 67899 999999999998433211 1236899999975
No 112
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=72.21 E-value=1.1 Score=33.23 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=26.2
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMR 214 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~ 214 (473)
.+.|..|..=||..|+.-... .+ .+.|+|+.|.+
T Consensus 18 MI~Cd~C~~W~H~~Cvgi~~~-~~-~~~~~C~~C~~ 51 (52)
T 3o7a_A 18 MIECNECHTWIHLSCAKIRKS-NV-PEVFVCQKCRD 51 (52)
T ss_dssp EEECTTTCCEEETTTTTCCGG-GC-CSSCCCHHHHT
T ss_pred EEEcCCCCccccccccCCCcc-cC-CCcEECcCCCC
Confidence 678999999999999985432 23 47899998853
No 113
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.44 E-value=0.78 Score=36.95 Aligned_cols=38 Identities=26% Similarity=0.573 Sum_probs=24.1
Q ss_pred ccccccccccccc----Ccee-ecCCCCCCCcccccccCcccc
Q 041992 119 TEEEDVCFICFDG----GSLV-LCDRKGCPKAYHPACIKREES 156 (473)
Q Consensus 119 ~~ned~CfVC~dG----GeLv-~CD~~gCPraYH~~CL~p~~~ 156 (473)
...++.|.||.+. +.|+ -|.=++.-.+||..||.....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~ 54 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIK 54 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHH
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHh
Confidence 3456789999853 3443 243112238999999988753
No 114
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=71.33 E-value=0.62 Score=36.99 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=27.9
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.+.|+.|..=||..|+.-..........|+|+.|...
T Consensus 25 MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 25 MIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp EEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred EEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 6789999999999999854322222368999999764
No 115
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=67.01 E-value=0.28 Score=40.73 Aligned_cols=84 Identities=24% Similarity=0.616 Sum_probs=52.9
Q ss_pred ccccccccccc-------CceeecCCCCCCCcccccccCcccccCCCCCceeecCc-------------------ccccc
Q 041992 121 EEDVCFICFDG-------GSLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH-------------------ICSIC 174 (473)
Q Consensus 121 ned~CfVC~dG-------GeLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H-------------------~C~vC 174 (473)
++..|.||.+. |+.+.-- .|.-.||..|+...... .-.||.| .|.+|
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~--~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC 78 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVST--ECGHVFCSQCLRDSLKN-----ANTCPTCRKKINHKRYHPIYIGSGTVSCPIC 78 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEE--TTCCEEEHHHHHHHHTT-----CSBCTTTCCBCTTTCEEECBCSSSSCBCTTT
T ss_pred CCCCCcccChhhhCccccccCeEec--CCCChhhHHHHHHHHHh-----CCCCCCCCCcCccccccccccCCCCCCCCCC
Confidence 45679999752 3332333 48889999999876531 1267754 46677
Q ss_pred cCCc--------eeeccCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 175 EKAS--------YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 175 ~k~s--------l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
...- ......|+..||..|+... + .....|+.|...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~-~----~~~~~CP~Cr~~~ 123 (133)
T 4ap4_A 79 MDGYSEIVQNGRLIVSTECGHVFCSQCLRDS-L----KNANTCPTCRKKI 123 (133)
T ss_dssp CCBHHHHHHTTCCEEEETTSBEEEHHHHHHH-H----HHCSBCTTTCCBC
T ss_pred CCccccccccCcceEeCCCCChhhHHHHHHH-H----HcCCCCCCCCCcC
Confidence 6531 1255678899999998631 1 1235899998764
No 116
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=63.06 E-value=5.5 Score=35.72 Aligned_cols=51 Identities=18% Similarity=0.386 Sum_probs=27.2
Q ss_pred ccccccccc---CceeecCCCCCCCcccccccCcc-----c--ccCCCCCceeecCc-------ccccccCC
Q 041992 123 DVCFICFDG---GSLVLCDRKGCPKAYHPACIKRE-----E--SFFRSKAKWNCGWH-------ICSICEKA 177 (473)
Q Consensus 123 d~CfVC~dG---GeLv~CD~~gCPraYH~~CL~p~-----~--~~~~p~g~W~CP~H-------~C~vC~k~ 177 (473)
..|..|+.. +.++.-. .+.||+.|..=. + ..+...+.-+|..| .|..|++.
T Consensus 61 ~~C~~C~~~I~~~~~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~kC~~C~~~ 128 (182)
T 2jtn_A 61 PMCAGCDQHILDRFILKAL----DRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLG 128 (182)
T ss_dssp CBCBTSSSBCCCSEEEEET----TEEECSSTTSCTTTCCCCSSCCEEETTEEECHHHHHHTTSCCCTTTCCC
T ss_pred CcCccCCCCccCceeEEec----CCeEccccCccCCCCCccCCCceeECCEeeecCccccccccccccCCCc
Confidence 468888752 2333333 567787666421 1 11123566677655 46666653
No 117
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=61.17 E-value=0.86 Score=34.85 Aligned_cols=46 Identities=22% Similarity=0.438 Sum_probs=27.7
Q ss_pred cccccccccccccC--ce-eecCCCCCCCcccccccCcccccCCCCCceeec
Q 041992 119 TEEEDVCFICFDGG--SL-VLCDRKGCPKAYHPACIKREESFFRSKAKWNCG 167 (473)
Q Consensus 119 ~~ned~CfVC~dGG--eL-v~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP 167 (473)
+...+.|.||..++ +| .-|.-++.-++||..||...... .+.+.||
T Consensus 3 ~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~---~~~~~C~ 51 (60)
T 1vyx_A 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI---SRNTACQ 51 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH---HTCSBCT
T ss_pred CCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh---CCCCccC
Confidence 34567899997643 22 34441133359999999987632 2345555
No 118
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=60.99 E-value=4.1 Score=31.67 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=27.4
Q ss_pred cccCC---c-eeecc--CCCccccccccCCCccccc---cCCeeecCCCC
Q 041992 173 ICEKA---S-YYMCY--TCTYSLCKGCTKGADYYSL---RGNKGFCGICM 213 (473)
Q Consensus 173 vC~k~---s-l~~C~--~Cp~AyH~~CL~~~~~~sv---~~~kwfC~~C~ 213 (473)
+|+.. + .+.|. .|..=||..|+.-...+.. ....|+|+.|.
T Consensus 14 ~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 14 ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCR 63 (68)
T ss_dssp TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHH
T ss_pred ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCcc
Confidence 46554 2 67897 5999999999974221111 12479999885
No 119
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=59.09 E-value=2.3 Score=39.49 Aligned_cols=46 Identities=24% Similarity=0.536 Sum_probs=31.7
Q ss_pred ccccccCC--------ceeeccCCCccccccccCCCc--ccc---cc-CCeeecCCCCcc
Q 041992 170 ICSICEKA--------SYYMCYTCTYSLCKGCTKGAD--YYS---LR-GNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~--------sl~~C~~Cp~AyH~~CL~~~~--~~s---v~-~~kwfC~~C~~~ 215 (473)
.|.+|++. ..+.|+.|..=||..|+.-.. ... +| ...|+|+.|...
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 45566653 167899999999999997532 011 12 137999999874
No 120
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=49.99 E-value=6.9 Score=26.62 Aligned_cols=8 Identities=25% Similarity=0.700 Sum_probs=6.7
Q ss_pred CCceeecC
Q 041992 161 KAKWNCGW 168 (473)
Q Consensus 161 ~g~W~CP~ 168 (473)
.|+|.||.
T Consensus 3 ~gDW~C~~ 10 (32)
T 2lk0_A 3 FEDWLCNK 10 (32)
T ss_dssp CSEEECTT
T ss_pred CCCCCcCc
Confidence 58999995
No 121
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=48.01 E-value=3.6 Score=43.45 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=26.5
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.+.|+.|..=||..|+.-........+.|+|+.|...
T Consensus 52 MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 52 MIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp EEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred eEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 4558899999999999843322122368999999854
No 122
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=45.89 E-value=6.2 Score=37.76 Aligned_cols=45 Identities=22% Similarity=0.466 Sum_probs=32.5
Q ss_pred CcccccccCCc--eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 168 WHICSICEKAS--YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 168 ~H~C~vC~k~s--l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
...|.+|..-. -..|..|...||..|+... .. ..+..-|+.|...
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~--~~-~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKY--FQ-SNAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHH--TT-TCSSCBCTTTCCB
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHH--HH-hCCCCCCCCCCCC
Confidence 45788888754 4789899999999999632 11 1335689999874
No 123
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=44.85 E-value=9.6 Score=26.08 Aligned_cols=9 Identities=33% Similarity=0.881 Sum_probs=7.2
Q ss_pred CCCceeecC
Q 041992 160 SKAKWNCGW 168 (473)
Q Consensus 160 p~g~W~CP~ 168 (473)
..|+|.||.
T Consensus 3 ~~gDW~C~~ 11 (33)
T 2k1p_A 3 SANDWQCKT 11 (33)
T ss_dssp SSSSCBCSS
T ss_pred CCCCcccCC
Confidence 468999994
No 124
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=44.64 E-value=8.9 Score=27.11 Aligned_cols=34 Identities=18% Similarity=0.546 Sum_probs=22.8
Q ss_pred cccccccccccc---C-ceeecCCCCCCCcccccccCccc
Q 041992 120 EEEDVCFICFDG---G-SLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 120 ~ned~CfVC~dG---G-eLv~CD~~gCPraYH~~CL~p~~ 155 (473)
..+..|.+|.+. | ..+.-. .|.-.||..|+....
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~--~C~H~f~~~Ci~~w~ 40 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLP--RCGHGFHAECVDMWL 40 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECS--SSCCEECTTHHHHTT
T ss_pred CCCCcCccCCccccCCCceEECC--CCCCcccHHHHHHHH
Confidence 345679999753 2 233332 488899999997664
No 125
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=43.18 E-value=11 Score=30.85 Aligned_cols=35 Identities=20% Similarity=0.645 Sum_probs=26.6
Q ss_pred CCCCceeecCcccccccCC---ceeecc--CCCccccccccCC
Q 041992 159 RSKAKWNCGWHICSICEKA---SYYMCY--TCTYSLCKGCTKG 196 (473)
Q Consensus 159 ~p~g~W~CP~H~C~vC~k~---sl~~C~--~Cp~AyH~~CL~~ 196 (473)
+|..+|. -.|.+|+.. +-+.|. .|..+||..|-..
T Consensus 11 Ip~~R~~---l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 11 IPPARWK---LTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCCCCC---CCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred CChHHhc---CCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 5778884 479999853 367785 5999999999764
No 126
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=41.02 E-value=14 Score=39.63 Aligned_cols=75 Identities=25% Similarity=0.450 Sum_probs=24.7
Q ss_pred cccccccccccc--C---ceeecCCCCCCCcccccccCcccccC------------CCCCceee----cCcccccccCC-
Q 041992 120 EEEDVCFICFDG--G---SLVLCDRKGCPKAYHPACIKREESFF------------RSKAKWNC----GWHICSICEKA- 177 (473)
Q Consensus 120 ~ned~CfVC~dG--G---eLv~CD~~gCPraYH~~CL~p~~~~~------------~p~g~W~C----P~H~C~vC~k~- 177 (473)
....+|..|++. | +-+.|. .|.-..|..|.......- .....|.= ..-+|..|+..
T Consensus 46 ~~p~~C~~C~~~i~g~~~qg~~C~--~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l 123 (674)
T 3pfq_A 46 KQPTFCSHCTDFIWGFGKQGFQCQ--VCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLL 123 (674)
T ss_dssp ----------------------------------------------------------CCCCCEECCSSCCCCSSSCSCC
T ss_pred CCCCccccccccccccCCceeECC--CCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCcccccc
Confidence 345689999762 2 567798 799899999986432100 00112321 11378899774
Q ss_pred -----ceeeccCCCccccccccCC
Q 041992 178 -----SYYMCYTCTYSLCKGCTKG 196 (473)
Q Consensus 178 -----sl~~C~~Cp~AyH~~CL~~ 196 (473)
.-++|..|...+|..|...
T Consensus 124 ~g~~~qg~~C~~C~~~~H~~C~~~ 147 (674)
T 3pfq_A 124 YGLIHQGMKCDTCMMNVHKRCVMN 147 (674)
T ss_dssp BBSSSCEECCSSSCCCBCSSTTSS
T ss_pred chhhcCccccccCCcchhhhhhhc
Confidence 2589999999999999864
No 127
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=40.24 E-value=3.5 Score=43.20 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=27.5
Q ss_pred eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 179 YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 179 l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.+.|+.|..=||..|+.-........+.|+|+.|...
T Consensus 20 MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 20 MIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp EEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred eEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 6789999999999999843221112378999999764
No 128
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.01 E-value=9 Score=30.04 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=24.5
Q ss_pred CCccccccccccccccC--------------c-eeecCCCCCCCcccccccCccc
Q 041992 116 RRKTEEEDVCFICFDGG--------------S-LVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGG--------------e-Lv~CD~~gCPraYH~~CL~p~~ 155 (473)
...+..++.|.||.+.- + ++.-- .|.-.||..|+....
T Consensus 9 w~~~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~--~C~H~FH~~Ci~~Wl 61 (81)
T 2ecl_A 9 WSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWG--ECNHSFHNCCMSLWV 61 (81)
T ss_dssp CCCSCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEE--TTSCEEEHHHHHHHT
T ss_pred eeecCCCCCCcccChhhhccCcccccccCCCceEEEeC--CCCCccChHHHHHHH
Confidence 34455677788886532 2 22111 388899999998765
No 129
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=38.82 E-value=16 Score=32.28 Aligned_cols=51 Identities=18% Similarity=0.395 Sum_probs=25.6
Q ss_pred cccccccc---cCceeecCCCCCCCcccccccCcc-----c--ccCCCCCceeecCc-------ccccccCC
Q 041992 123 DVCFICFD---GGSLVLCDRKGCPKAYHPACIKRE-----E--SFFRSKAKWNCGWH-------ICSICEKA 177 (473)
Q Consensus 123 d~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~-----~--~~~~p~g~W~CP~H-------~C~vC~k~ 177 (473)
..|..|+. ++.++.-. .+.||+.|..=. + ..+...|.-+|..| .|..|++.
T Consensus 7 ~~C~~C~~~I~~~~~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~~~C~~C~~~ 74 (169)
T 2rgt_A 7 PMCAGCDQHILDRFILKAL----DRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLG 74 (169)
T ss_dssp CBBSSSSSBCCSSSCEECS----SCEECTTTSBCTTTCCBCCSCCEESSSCEECHHHHHHHHSCBCTTTCCB
T ss_pred CccccCCCccCCcEEEEEC----CcEEccccCccCCCCCcCCCCCcccCCeeeecccccccccccccccccc
Confidence 34666654 22233222 456776665321 1 11123566777665 57777764
No 130
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.54 E-value=7.1 Score=29.69 Aligned_cols=35 Identities=20% Similarity=0.595 Sum_probs=24.5
Q ss_pred cccccccccccc---cCceeecCCCCCCCcccccccCccc
Q 041992 119 TEEEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 119 ~~ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~ 155 (473)
...+..|.||.+ .++.+..- .|.-.||..|+....
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l--~C~H~fh~~Ci~~w~ 57 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVL--PCNHEFHAKCVDKWL 57 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEE--TTTEEEETTHHHHHH
T ss_pred cCCCCCCeECCcccCCCCeEEEE--CCCCHhHHHHHHHHH
Confidence 445678999984 34444444 488899999998764
No 131
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=37.90 E-value=6.5 Score=33.77 Aligned_cols=50 Identities=24% Similarity=0.568 Sum_probs=37.0
Q ss_pred cccccccCCc--eeeccCCCccccccccCCCccccccCCeeecCCCCcchhhhhcc
Q 041992 169 HICSICEKAS--YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIMLIENC 222 (473)
Q Consensus 169 H~C~vC~k~s--l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~~~iE~~ 222 (473)
|+|..|+.+- ..+-.-|..+||.+|... ....+...|+.|...+..||..
T Consensus 2 hfC~~C~~Pi~iygRmIPCkHvFCydCa~~----~~~~~~k~Cp~C~~~V~rVe~~ 53 (101)
T 3vk6_A 2 HFCDKCGLPIKVYGRMIPCKHVFCYDCAIL----HEKKGDKMCPGCSDPVQRIEQC 53 (101)
T ss_dssp CBCTTTCSBCSEEEEEETTCCEEEHHHHHH----HHHTTCCBCTTTCCBCSEEEEE
T ss_pred eecCccCCCeEEEeeeccccccHHHHHHHH----HHhccCCCCcCcCCeeeeeEEe
Confidence 7889999874 456667788999999741 1124567899999998888874
No 132
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=36.59 E-value=18 Score=27.44 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=23.4
Q ss_pred cccccccccccccc---CceeecCCCCCCCcccccccCccc
Q 041992 118 KTEEEDVCFICFDG---GSLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 118 ~~~ned~CfVC~dG---GeLv~CD~~gCPraYH~~CL~p~~ 155 (473)
....+..|.||.+. +..+.-- .|.-.||..|+....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~--~C~H~fc~~Ci~~~~ 49 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQL--PCNHLFHDSCIVPWL 49 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEEC--TTSCEEETTTTHHHH
T ss_pred cCCCCCCCeeCCccccCCCCEEEe--CCCCeecHHHHHHHH
Confidence 34556789999653 2222222 377889999998764
No 133
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=36.59 E-value=28 Score=32.47 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=29.1
Q ss_pred cccCCc-----eeeccCCCccccccccCCCccccccC---CeeecCCCCcc
Q 041992 173 ICEKAS-----YYMCYTCTYSLCKGCTKGADYYSLRG---NKGFCGICMRT 215 (473)
Q Consensus 173 vC~k~s-----l~~C~~Cp~AyH~~CL~~~~~~sv~~---~kwfC~~C~~~ 215 (473)
-||+.+ .+.|..|-+-||..|+....-+-++. -...|..|...
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 367654 58899999999999998543222332 24669999873
No 134
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.22 E-value=11 Score=30.05 Aligned_cols=43 Identities=26% Similarity=0.566 Sum_probs=28.3
Q ss_pred ccccccCCc--eeeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 170 ICSICEKAS--YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 170 ~C~vC~k~s--l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
.|.+|...- -..|..|..+||..|+.. +..- ...-.|+.|...
T Consensus 17 ~C~IC~~~i~~g~~C~~C~h~fH~~Ci~k--Wl~~-~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 17 ICNICHSLLIQGQSCETCGIRMHLPCVAK--YFQS-NAEPRCPHCNDY 61 (74)
T ss_dssp BCSSSCCBCSSSEECSSSCCEECHHHHHH--HSTT-CSSCCCTTTCSC
T ss_pred cCcchhhHcccCCccCCCCchhhHHHHHH--HHHh-cCCCCCCCCcCc
Confidence 466666543 357889999999999963 2111 123679988865
No 135
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=35.00 E-value=8.1 Score=31.58 Aligned_cols=15 Identities=27% Similarity=0.629 Sum_probs=12.0
Q ss_pred CCCCcccccccCccc
Q 041992 141 GCPKAYHPACIKREE 155 (473)
Q Consensus 141 gCPraYH~~CL~p~~ 155 (473)
.|.-.||..|+....
T Consensus 60 ~C~H~Fh~~Ci~~wl 74 (114)
T 1v87_A 60 KCSHAFHLLCLLAMY 74 (114)
T ss_dssp SSCCEECHHHHHHHH
T ss_pred CCCCcccHHHHHHHH
Confidence 477899999998654
No 136
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=33.58 E-value=10 Score=33.24 Aligned_cols=30 Identities=27% Similarity=0.655 Sum_probs=21.2
Q ss_pred cCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 183 YTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 183 ~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
..|...||..|+... +..+...|+.|...+
T Consensus 71 ~~CgH~fC~~Ci~~~----~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 71 KECLHRFCADCIITA----LRSGNKECPTCRKKL 100 (165)
T ss_dssp TTTCCEEEHHHHHHH----HHTTCCBCTTTCCBC
T ss_pred CCCCChhHHHHHHHH----HHhCcCCCCCCCCcC
Confidence 468888999998631 223467899999865
No 137
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=32.71 E-value=8.4 Score=31.28 Aligned_cols=43 Identities=23% Similarity=0.577 Sum_probs=27.9
Q ss_pred ccccccCCc--eeeccCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 170 ICSICEKAS--YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 170 ~C~vC~k~s--l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|.+|...- -..|..|+..||..|+... +......|+.|...+
T Consensus 24 ~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~----~~~~~~~CP~Cr~~~ 68 (100)
T 3lrq_A 24 RCFICMEKLRDARLCPHCSKLCCFSCIRRW----LTEQRAQCPHCRAPL 68 (100)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHH----HHHTCSBCTTTCCBC
T ss_pred CCccCCccccCccccCCCCChhhHHHHHHH----HHHCcCCCCCCCCcC
Confidence 345665532 3456789999999998631 111226899999875
No 138
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=32.67 E-value=19 Score=30.52 Aligned_cols=46 Identities=24% Similarity=0.710 Sum_probs=35.8
Q ss_pred cccccccCCc--------eeeccCCCccccccccCCCccccccCCeeecCCCCcchhh
Q 041992 169 HICSICEKAS--------YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIML 218 (473)
Q Consensus 169 H~C~vC~k~s--------l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~~~ 218 (473)
..|.+|+..- ...|..|....|.-|+. -....+.--|++|...+-.
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyE----YErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYE----YERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHH----HHHHTSCSSCTTTCCCCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHH----HHHhccCccccccCCcccc
Confidence 5789999862 57899999999999975 2345677789999987643
No 139
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=31.41 E-value=17 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.480 Sum_probs=18.1
Q ss_pred eeccCCCccccccccCCC-ccccccCCeeecCCCCc
Q 041992 180 YMCYTCTYSLCKGCTKGA-DYYSLRGNKGFCGICMR 214 (473)
Q Consensus 180 ~~C~~Cp~AyH~~CL~~~-~~~sv~~~kwfC~~C~~ 214 (473)
.+|..|+..||..|.... +++......-+|..|..
T Consensus 86 HHCR~CG~vfC~~Cs~~~~~~p~~~~p~RVC~~C~~ 121 (125)
T 1joc_A 86 HHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFN 121 (125)
T ss_dssp EECTTTCCEECGGGSCEEECCTTCSSCEEECHHHHH
T ss_pred ccCCCCCeEEChHHhCCccccCCCCCCCEeCHHHHH
Confidence 455566666666666431 11112233567777754
No 140
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=31.24 E-value=27 Score=27.30 Aligned_cols=53 Identities=21% Similarity=0.493 Sum_probs=33.7
Q ss_pred ceeecCcccccccCCc-----eeeccCCCccccccccCCC-ccccc--cCCeeecCCCCcch
Q 041992 163 KWNCGWHICSICEKAS-----YYMCYTCTYSLCKGCTKGA-DYYSL--RGNKGFCGICMRTI 216 (473)
Q Consensus 163 ~W~CP~H~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~-~~~sv--~~~kwfC~~C~~~~ 216 (473)
.|. |...|..|+..- ..+|..|+..||..|.... +++.. ....-.|..|...+
T Consensus 7 ~W~-~~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l 67 (73)
T 1vfy_A 7 DWI-DSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDY 67 (73)
T ss_dssp CCC-CCSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHH
T ss_pred cCc-cCCcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHH
Confidence 354 445788898852 5799999999999998632 11111 11246677776543
No 141
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.59 E-value=32 Score=25.47 Aligned_cols=35 Identities=31% Similarity=0.532 Sum_probs=24.1
Q ss_pred ccccccccccccccC-ceeecCCCCCCCcccccccCccc
Q 041992 118 KTEEEDVCFICFDGG-SLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 118 ~~~ned~CfVC~dGG-eLv~CD~~gCPraYH~~CL~p~~ 155 (473)
....+..|.+|.+.- +-+.- .|.-.||..|+....
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~ 51 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTI---DCGHNFCLKCITQIG 51 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEEC---TTCCEEEHHHHHHHC
T ss_pred hCccCCEeccCCcccCCeEEc---CCCChhhHHHHHHHH
Confidence 445667899998743 33322 388889999998754
No 142
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=30.41 E-value=41 Score=24.31 Aligned_cols=26 Identities=31% Similarity=0.763 Sum_probs=19.0
Q ss_pred cCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 183 YTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 183 ~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
..|...||..|+.. ....|+.|...+
T Consensus 22 l~CgH~fC~~Ci~~--------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 22 LPCLHTLCSGCLEA--------SGMQCPICQAPW 47 (56)
T ss_dssp STTSCCSBTTTCSS--------SSSSCSSCCSSS
T ss_pred cCCCCcccHHHHcc--------CCCCCCcCCcEe
Confidence 45788899999864 245788888764
No 143
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=29.97 E-value=14 Score=29.56 Aligned_cols=47 Identities=23% Similarity=0.532 Sum_probs=29.3
Q ss_pred ccccccCCc-----eeeccCCCccccccccCCC-ccccccCCeeecCCCCcch
Q 041992 170 ICSICEKAS-----YYMCYTCTYSLCKGCTKGA-DYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 170 ~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~-~~~sv~~~kwfC~~C~~~~ 216 (473)
.|..|+..- ..+|..|+..||..|.... +++......-+|..|...+
T Consensus 21 ~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l 73 (82)
T 2yw8_A 21 HCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLL 73 (82)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTCSSCEEECHHHHHHT
T ss_pred cccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCCCCcCEECHHHHHHH
Confidence 456666642 4678888888998887631 1222223457888887643
No 144
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=29.87 E-value=13 Score=27.59 Aligned_cols=36 Identities=25% Similarity=0.556 Sum_probs=24.3
Q ss_pred ccccccccccccc---cCceeecCCCCCCCcccccccCccc
Q 041992 118 KTEEEDVCFICFD---GGSLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 118 ~~~ned~CfVC~d---GGeLv~CD~~gCPraYH~~CL~p~~ 155 (473)
....+..|.||.+ .++.+..- .|.-.||..|+....
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~--~C~H~fc~~Ci~~~~ 48 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRL--PCMHLFHQVCVDQWL 48 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEEC--TTSCEEEHHHHHHHH
T ss_pred cCCCCCCCeeCCccccCCCcEEEe--CCCCHHHHHHHHHHH
Confidence 3455677999964 33333333 488899999998764
No 145
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=29.07 E-value=22 Score=29.18 Aligned_cols=31 Identities=26% Similarity=0.654 Sum_probs=22.7
Q ss_pred CCCccccccccCCCccccccCCeeecCCCCcchhh
Q 041992 184 TCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIML 218 (473)
Q Consensus 184 ~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~~~ 218 (473)
.|+..||..|+... +..+...|+.|...+..
T Consensus 32 ~CgH~fC~~Ci~~~----~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 32 PCNHTLCKPCFQST----VEKASLCCPFCRRRVSS 62 (115)
T ss_dssp TTSCEECHHHHCCC----CCTTTSBCTTTCCBCHH
T ss_pred CCCCHHhHHHHHHH----HhHCcCCCCCCCcccCc
Confidence 68999999999742 12345789999987643
No 146
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.97 E-value=27 Score=25.39 Aligned_cols=48 Identities=27% Similarity=0.439 Sum_probs=29.5
Q ss_pred CccccccccccccccC-ceeecCCCCCCCcccccccCcccccCCCCCceeecCc
Q 041992 117 RKTEEEDVCFICFDGG-SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGWH 169 (473)
Q Consensus 117 ~~~~ned~CfVC~dGG-eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~H 169 (473)
.....+..|.||.+.- +-+.- .|.-.||..|+...... ..+...||.|
T Consensus 15 ~~~~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 63 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGET--SCGFFKCPLC 63 (63)
T ss_dssp CCCCCCCBCTTTCSBCSSCEEC---TTSSEECHHHHHHHHHH--CSSCCCCSCC
T ss_pred HhCccCCCCCcCCchhCCeEEe---CCCCcchHHHHHHHHHc--CCCCCcCcCC
Confidence 3445677899998642 22222 38888999999876531 1234567643
No 147
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=28.54 E-value=13 Score=31.26 Aligned_cols=15 Identities=40% Similarity=0.667 Sum_probs=12.5
Q ss_pred CCCCcccccccCccc
Q 041992 141 GCPKAYHPACIKREE 155 (473)
Q Consensus 141 gCPraYH~~CL~p~~ 155 (473)
.|.-.||..|+....
T Consensus 72 ~C~H~FH~~Ci~~Wl 86 (106)
T 3dpl_R 72 VCNHAFHFHCISRWL 86 (106)
T ss_dssp TTSCEEEHHHHHHHH
T ss_pred ccCcEECHHHHHHHH
Confidence 488899999998765
No 148
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=28.27 E-value=13 Score=32.02 Aligned_cols=38 Identities=29% Similarity=0.404 Sum_probs=2.9
Q ss_pred ccccccccccccccCce--eecCC--------------CCCCCcccccccCccc
Q 041992 118 KTEEEDVCFICFDGGSL--VLCDR--------------KGCPKAYHPACIKREE 155 (473)
Q Consensus 118 ~~~ned~CfVC~dGGeL--v~CD~--------------~gCPraYH~~CL~p~~ 155 (473)
.+..++.|.||...=+. +.|.. ..|.-.||..|+....
T Consensus 44 wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl 97 (117)
T 4a0k_B 44 WDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL 97 (117)
T ss_dssp ECCCC-------------------------------------------------
T ss_pred ecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHH
Confidence 35567899999753111 11111 1477889999998865
No 149
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=27.44 E-value=29 Score=32.14 Aligned_cols=47 Identities=21% Similarity=0.515 Sum_probs=28.6
Q ss_pred cCcccccccCCc-----eeeccCCCccccccccCCCccccccC-----CeeecCCCCcc
Q 041992 167 GWHICSICEKAS-----YYMCYTCTYSLCKGCTKGADYYSLRG-----NKGFCGICMRT 215 (473)
Q Consensus 167 P~H~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~~~~sv~~-----~kwfC~~C~~~ 215 (473)
+.-.|..|+..- ..+|..|+..||..|.... ..++. ..-.|..|...
T Consensus 160 ~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~--~~~~~~~~~~~~RvC~~C~~~ 216 (220)
T 1dvp_A 160 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ--CPLPKYGIEKEVRVCDGCFAA 216 (220)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE--EEEGGGTEEEEEEECHHHHHH
T ss_pred CCCccCCCCCccCCcccccccCCcCCEEChHHhCCe--eecCcCCCCCCCEeCHHHHHH
Confidence 334566776641 5788888889999887632 12221 23577777643
No 150
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=27.05 E-value=13 Score=27.43 Aligned_cols=44 Identities=23% Similarity=0.659 Sum_probs=27.0
Q ss_pred cccccCCc--eeeccCCCccccccccCCCccccccCCeeecCCCCcchhhh
Q 041992 171 CSICEKAS--YYMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTIMLI 219 (473)
Q Consensus 171 C~vC~k~s--l~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~~~i 219 (473)
|.+|...- -.....|...||..|+.. +. .....|+.|...+..+
T Consensus 8 C~IC~~~~~~~~~~~~C~H~fc~~Ci~~--~~---~~~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 8 CPICLEDPSNYSMALPCLHAFCYVCITR--WI---RQNPTCPLCKVPVESV 53 (68)
T ss_dssp CSSCCSCCCSCEEETTTTEEESTTHHHH--HH---HHSCSTTTTCCCCCCE
T ss_pred CeeCCccccCCcEecCCCCeeHHHHHHH--HH---hCcCcCcCCChhhHhh
Confidence 44555432 124456899999999863 11 1235799998876443
No 151
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=26.89 E-value=11 Score=30.06 Aligned_cols=35 Identities=23% Similarity=0.453 Sum_probs=24.0
Q ss_pred ccccccccccccc---CceeecCCCCCCCcccccccCccc
Q 041992 119 TEEEDVCFICFDG---GSLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 119 ~~ned~CfVC~dG---GeLv~CD~~gCPraYH~~CL~p~~ 155 (473)
...+..|.||.+. |+.+.-- .|.-.||..|+....
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l--~C~H~Fh~~Ci~~wl 74 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATEL--PCHHYFHKPCVSIWL 74 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEE--TTTEEEEHHHHHHHH
T ss_pred cCCCCCCcccChhhcCCCcEEec--CCCChHHHHHHHHHH
Confidence 3456779999742 3333333 388899999998764
No 152
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.88 E-value=21 Score=28.51 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=25.1
Q ss_pred ccccccccccccC-ceeecCCCCCCCcccccccCccc
Q 041992 120 EEEDVCFICFDGG-SLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 120 ~ned~CfVC~dGG-eLv~CD~~gCPraYH~~CL~p~~ 155 (473)
...+.|.||..-- .-+.|. .|...||..|+....
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kWl 47 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYF 47 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECS--SSCCEECHHHHHHHS
T ss_pred CCCCcCcchhhHcccCCccC--CCCchhhHHHHHHHH
Confidence 4456799998632 224676 699999999998765
No 153
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=25.46 E-value=20 Score=28.84 Aligned_cols=32 Identities=22% Similarity=0.514 Sum_probs=21.2
Q ss_pred cCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 183 YTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 183 ~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
..|+..||..|+... .....+...|+.|...+
T Consensus 37 ~~CgH~fC~~Ci~~~--~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 37 TKCDHIFCKFCMLKL--LNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp CTTSCCCCSHHHHHH--HHSSSSSCCCTTTSCCC
T ss_pred CCCCCHHHHHHHHHH--HHhCCCCCCCcCCCCcC
Confidence 368899999998631 11122346799998764
No 154
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.93 E-value=23 Score=27.13 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=23.9
Q ss_pred CccccccccccccccC-c----eeecCCCCCCCcccccccCccc
Q 041992 117 RKTEEEDVCFICFDGG-S----LVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 117 ~~~~ned~CfVC~dGG-e----Lv~CD~~gCPraYH~~CL~p~~ 155 (473)
.....+..|.+|.+.- + .+.- .|.-.||..|+....
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~---~CgH~fC~~Ci~~~~ 50 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLL---HCGHTICRQCLEKLL 50 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEEC---SSSCEEEHHHHHHHH
T ss_pred hhccCCCCCccCCccccccCCCeEEC---CCCChhhHHHHHHHH
Confidence 3445567799998642 1 3332 388889999998664
No 155
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=24.90 E-value=27 Score=31.39 Aligned_cols=18 Identities=22% Similarity=0.505 Sum_probs=12.8
Q ss_pred CCCceeecCc---------ccccccCC
Q 041992 160 SKAKWNCGWH---------ICSICEKA 177 (473)
Q Consensus 160 p~g~W~CP~H---------~C~vC~k~ 177 (473)
..+..+|..| .|..|++.
T Consensus 52 ~~g~~yC~~cy~~~~~~~~~C~~C~~~ 78 (188)
T 1rut_X 52 KSGMILCRNDYIRLFGNSGACSACGQS 78 (188)
T ss_dssp ETTEEECHHHHHHHHSCCEECTTTCCE
T ss_pred eCCccccccccccccccCCccccCCCc
Confidence 4567788765 38888874
No 156
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=24.42 E-value=17 Score=30.22 Aligned_cols=29 Identities=24% Similarity=0.640 Sum_probs=19.7
Q ss_pred CCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 184 TCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 184 ~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|+..||..|+... +..+...|+.|...+
T Consensus 69 ~CgH~fC~~Ci~~~----~~~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 69 VCQHNVCKDCLDRS----FRAQVFSCPACRYDL 97 (124)
T ss_dssp TTSCEEEHHHHHHH----HHTTCCBCTTTCCBC
T ss_pred eCCCcccHHHHHHH----HhHCcCCCCCCCccC
Confidence 57888888888521 123455899998765
No 157
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.40 E-value=44 Score=23.46 Aligned_cols=46 Identities=22% Similarity=0.404 Sum_probs=27.8
Q ss_pred ccccccccccccccC-ceeecCCCCCCCcccccccCcccccCCCCCceeecC
Q 041992 118 KTEEEDVCFICFDGG-SLVLCDRKGCPKAYHPACIKREESFFRSKAKWNCGW 168 (473)
Q Consensus 118 ~~~ned~CfVC~dGG-eLv~CD~~gCPraYH~~CL~p~~~~~~p~g~W~CP~ 168 (473)
....+..|.+|.+.- +-+.- .|.-.||..|+...... ......||.
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~ 57 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVII---ECGHNFCKACITRWWED--LERDFPCPV 57 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTS--SCCSCCCSC
T ss_pred ccccCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHh--cCCCCCCCC
Confidence 345567899998632 22221 37778999999876421 124456764
No 158
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=24.38 E-value=36 Score=31.97 Aligned_cols=47 Identities=17% Similarity=0.437 Sum_probs=29.6
Q ss_pred cCcccccccCCc-----eeeccCCCccccccccCCCccccccC-----CeeecCCCCcc
Q 041992 167 GWHICSICEKAS-----YYMCYTCTYSLCKGCTKGADYYSLRG-----NKGFCGICMRT 215 (473)
Q Consensus 167 P~H~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~~~~sv~~-----~kwfC~~C~~~ 215 (473)
+...|..|+..- ..+|..|+..||..|.... ..+|. ..-.|..|...
T Consensus 163 ~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~--~~~p~~~~~~~~RVC~~C~~~ 219 (226)
T 3zyq_A 163 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY--STIPKFGIEKEVRVCEPCYEQ 219 (226)
T ss_dssp CCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE--EEEGGGTEEEEEEECHHHHHH
T ss_pred cCCCCcCcCCCCCccccccccCCCcCEeChhhcCCc--ccCCCCCCCCCCEeCHHHHHH
Confidence 344677777642 5788888889999887632 12221 24577777754
No 159
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=24.25 E-value=23 Score=36.58 Aligned_cols=36 Identities=25% Similarity=0.732 Sum_probs=0.0
Q ss_pred cccc-------cCCceeecc--CCCccccccccCCCccccccCCeee----------------cCCCCcch
Q 041992 171 CSIC-------EKASYYMCY--TCTYSLCKGCTKGADYYSLRGNKGF----------------CGICMRTI 216 (473)
Q Consensus 171 C~vC-------~k~sl~~C~--~Cp~AyH~~CL~~~~~~sv~~~kwf----------------C~~C~~~~ 216 (473)
|.+| +.-....|. +|...||..|+. +|| |+.|...+
T Consensus 311 CaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~----------kWLrs~~~sRqSFnvi~G~CPyCr~pI 371 (381)
T 3k1l_B 311 CNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE----------EWFKTLMDGKTFLEVSFGQCPFCKAKL 371 (381)
T ss_dssp CSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH----------HHHHHHHSSSCTTTCCEEECTTTCCEE
T ss_pred CcccceeecCCCCCccccccCCccCCccchHHHH----------HHHHhCCCccccccccCCCCCCCCCcC
No 160
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=24.10 E-value=26 Score=28.70 Aligned_cols=29 Identities=28% Similarity=0.755 Sum_probs=23.8
Q ss_pred cccccccCCc---eeeccCCCccccccccCCC
Q 041992 169 HICSICEKAS---YYMCYTCTYSLCKGCTKGA 197 (473)
Q Consensus 169 H~C~vC~k~s---l~~C~~Cp~AyH~~CL~~~ 197 (473)
..|..|++.. .+.|..|....|..|...+
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCCSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCC
Confidence 4688898865 6899999999999998643
No 161
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=23.94 E-value=50 Score=24.36 Aligned_cols=35 Identities=20% Similarity=0.530 Sum_probs=20.1
Q ss_pred eeccCCCccccccccCCCccccccCCeeecCCCCcc
Q 041992 180 YMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRT 215 (473)
Q Consensus 180 ~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~ 215 (473)
+.|..|+.-|-..=-.+.+|..+| ..|.|+.|...
T Consensus 5 y~C~vCGyvyd~~~Gd~t~f~~lP-~dw~CP~Cg~~ 39 (46)
T 6rxn_A 5 YVCNVCGYEYDPAEHDNVPFDQLP-DDWCCPVCGVS 39 (46)
T ss_dssp EEETTTCCEECGGGGTTCCGGGSC-TTCBCTTTCCB
T ss_pred EECCCCCeEEeCCcCCCcchhhCC-CCCcCcCCCCc
Confidence 456677766653211112344554 45999999864
No 162
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=23.69 E-value=30 Score=28.74 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=10.6
Q ss_pred CCceeecCc-------ccccccCC
Q 041992 161 KAKWNCGWH-------ICSICEKA 177 (473)
Q Consensus 161 ~g~W~CP~H-------~C~vC~k~ 177 (473)
++.-+|..| .|..|++.
T Consensus 49 ~g~~yC~~cy~~~~~~~C~~C~~~ 72 (126)
T 2xqn_T 49 NDKPVCKPCYVKNHAVVCQGCHNA 72 (126)
T ss_dssp TTEEEEHHHHHHHSCCBCTTTCSB
T ss_pred CCEEechHHhCcCcCccCcccCCc
Confidence 456677654 57777764
No 163
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.67 E-value=24 Score=26.47 Aligned_cols=35 Identities=23% Similarity=0.720 Sum_probs=23.7
Q ss_pred cccccccccccccc---C-ceeecCCCCCCCcccccccCccc
Q 041992 118 KTEEEDVCFICFDG---G-SLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 118 ~~~ned~CfVC~dG---G-eLv~CD~~gCPraYH~~CL~p~~ 155 (473)
....+..|.||.+. + .+... .|.-.||..|+....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~---~C~H~f~~~Ci~~~~ 49 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGIC---PCKHAFHRKCLIKWL 49 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEE---TTTEEEEHHHHHHHH
T ss_pred cCCCCCCCcCCCcccCCCCcEEEc---CCCCEecHHHHHHHH
Confidence 44556789999764 2 33332 377889999998754
No 164
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=23.64 E-value=24 Score=27.90 Aligned_cols=29 Identities=28% Similarity=0.787 Sum_probs=20.9
Q ss_pred CCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 184 TCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 184 ~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|+..||..|+... ...+...|+.|.+.+
T Consensus 32 ~CGH~fC~~Cl~~~----~~~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 32 TCGYQICRFCWHRI----RTDENGLCPACRKPY 60 (78)
T ss_dssp TTSCCCCHHHHHHH----TTSSCSBCTTTCCBC
T ss_pred CCCCCcCHHHHHHH----HhcCCCCCCCCCCcc
Confidence 58899999998631 123467899999875
No 165
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=23.48 E-value=22 Score=33.89 Aligned_cols=32 Identities=22% Similarity=0.456 Sum_probs=24.4
Q ss_pred cccccccccc-CceeecCCCCCCCcccccccCccc
Q 041992 122 EDVCFICFDG-GSLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 122 ed~CfVC~dG-GeLv~CD~~gCPraYH~~CL~p~~ 155 (473)
-..|.+|.+- ..-+.|. .|...||..|+....
T Consensus 180 i~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~~~ 212 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYF 212 (238)
T ss_dssp CCBCTTTCSBCSSCEECS--SSCCEECHHHHHHHT
T ss_pred CCcCcchhhHHhCCcccC--ccChHHHHHHHHHHH
Confidence 5569999862 2336788 599999999997753
No 166
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=22.52 E-value=42 Score=28.83 Aligned_cols=36 Identities=25% Similarity=0.495 Sum_probs=22.7
Q ss_pred eeeccCCCc-----cccccccCCCccccccC---CeeecCCCCcch
Q 041992 179 YYMCYTCTY-----SLCKGCTKGADYYSLRG---NKGFCGICMRTI 216 (473)
Q Consensus 179 l~~C~~Cp~-----AyH~~CL~~~~~~sv~~---~kwfC~~C~~~~ 216 (473)
.+.|..|.. +||.+|-. ++..+.. -..||.+|..++
T Consensus 48 ~~hC~~C~~~f~~~a~CPdC~q--~LevLkACGAvdYFC~~chgLi 91 (101)
T 2jne_A 48 HARCRSCGEFIEMKALCPDCHQ--PLQVLKACGAVDYFCQHGHGLI 91 (101)
T ss_dssp EEEETTTCCEEEEEEECTTTCS--BCEEEEETTEEEEEETTTTEEE
T ss_pred EEECccccchhhccccCcchhh--HHHHHHHhcCcchhhccCCcee
Confidence 455666664 56777765 2333321 368999999875
No 167
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.46 E-value=89 Score=25.67 Aligned_cols=14 Identities=0% Similarity=-0.163 Sum_probs=9.0
Q ss_pred cccCCeeecCCCCc
Q 041992 201 SLRGNKGFCGICMR 214 (473)
Q Consensus 201 sv~~~kwfC~~C~~ 214 (473)
.+..+..+|..|..
T Consensus 90 ~~~~~~~~C~~~~~ 103 (114)
T 1j2o_A 90 GDEDERLITRLENT 103 (114)
T ss_dssp CCSSSCCCEEEECT
T ss_pred EEcCCEeecchhhh
Confidence 34456788887654
No 168
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=22.38 E-value=23 Score=29.03 Aligned_cols=27 Identities=22% Similarity=0.751 Sum_probs=21.5
Q ss_pred cccccccCC-------ceeeccCCCccccccccC
Q 041992 169 HICSICEKA-------SYYMCYTCTYSLCKGCTK 195 (473)
Q Consensus 169 H~C~vC~k~-------sl~~C~~Cp~AyH~~CL~ 195 (473)
..|.+|++. .-++|..|...+|..|..
T Consensus 39 s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp CBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred CEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 367778775 247899999999999975
No 169
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=22.07 E-value=20 Score=27.12 Aligned_cols=29 Identities=10% Similarity=0.124 Sum_probs=21.5
Q ss_pred CCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 184 TCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 184 ~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|+..||..|+... +..+...|+.|...+
T Consensus 25 ~CgH~fc~~Ci~~~----~~~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 25 STGQTYERSSIQKW----LDAGHKTCPKSQETL 53 (78)
T ss_dssp TTTEEEEHHHHHHH----HTTTCCBCTTTCCBC
T ss_pred CCCCeecHHHHHHH----HHHCcCCCCCCcCCC
Confidence 69999999998631 223467899998764
No 170
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=21.99 E-value=15 Score=29.97 Aligned_cols=48 Identities=23% Similarity=0.479 Sum_probs=29.4
Q ss_pred ccccccCCc-----eeeccCCCccccccccCCCc-cccccCCeeecCCCCcchh
Q 041992 170 ICSICEKAS-----YYMCYTCTYSLCKGCTKGAD-YYSLRGNKGFCGICMRTIM 217 (473)
Q Consensus 170 ~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~~-~~sv~~~kwfC~~C~~~~~ 217 (473)
.|..|+..- ..+|..|+..||..|..... ++.+....-+|..|...+.
T Consensus 22 ~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~ 75 (90)
T 3t7l_A 22 NCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETIS 75 (90)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHH
T ss_pred cCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHH
Confidence 456666541 46788888899998886421 1111123467888877543
No 171
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.95 E-value=36 Score=26.19 Aligned_cols=30 Identities=30% Similarity=0.864 Sum_probs=23.2
Q ss_pred ecCcccccccCCceeeccCCCccccc-cccC
Q 041992 166 CGWHICSICEKASYYMCYTCTYSLCK-GCTK 195 (473)
Q Consensus 166 CP~H~C~vC~k~sl~~C~~Cp~AyH~-~CL~ 195 (473)
.+.-.|.+|+..+.+.|..|..-||. .|.+
T Consensus 10 ~~~~~C~vC~~~~kY~CPrC~~~yCSl~C~k 40 (56)
T 2yqq_A 10 CSTVVCVICLEKPKYRCPACRVPYCSVVCFR 40 (56)
T ss_dssp CCCCCCTTTCSCCSEECTTTCCEESSHHHHH
T ss_pred CCCCccCcCcCCCeeeCCCCCCCeeCHHHHH
Confidence 44457899999779999999988884 5543
No 172
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=21.66 E-value=27 Score=27.56 Aligned_cols=42 Identities=33% Similarity=0.759 Sum_probs=29.0
Q ss_pred ccccccCCc-----eeeccCCCccccccccCCCccccccCC--eeecCCCCc
Q 041992 170 ICSICEKAS-----YYMCYTCTYSLCKGCTKGADYYSLRGN--KGFCGICMR 214 (473)
Q Consensus 170 ~C~vC~k~s-----l~~C~~Cp~AyH~~CL~~~~~~sv~~~--kwfC~~C~~ 214 (473)
.|.+|.+.. -..|..|..-+|.-|-. ..+++.+ .|.|..|.+
T Consensus 11 ~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg---~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 11 TCGICHKTKFADGCGHNCSYCQTKFCARCGG---RVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp CCSSSSCSCCCSSCCEEBTTTCCEECTTSEE---EEESSTTCEEEEEHHHHH
T ss_pred hhhhhccceeccCCCccccccCCeeecccCC---EeeecCCeEEEEehhhhh
Confidence 567777764 36788888888888864 3444443 699988754
No 173
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=21.51 E-value=22 Score=26.96 Aligned_cols=38 Identities=26% Similarity=0.507 Sum_probs=25.0
Q ss_pred CCccccccccccccccC-ceeecCCCCCCCcccccccCccc
Q 041992 116 RRKTEEEDVCFICFDGG-SLVLCDRKGCPKAYHPACIKREE 155 (473)
Q Consensus 116 ~~~~~ned~CfVC~dGG-eLv~CD~~gCPraYH~~CL~p~~ 155 (473)
......+..|.+|.+.- +-+.-. .|.-.||..|+....
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~--~CgH~fC~~Ci~~~~ 47 (74)
T 2yur_A 9 DDPIPDELLCLICKDIMTDAVVIP--CCGNSYCDECIRTAL 47 (74)
T ss_dssp CCCSCGGGSCSSSCCCCTTCEECS--SSCCEECTTHHHHHH
T ss_pred cccCCCCCCCcCCChHHhCCeEcC--CCCCHHHHHHHHHHH
Confidence 33455677899998642 223221 388899999997765
No 174
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=21.18 E-value=24 Score=24.69 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=21.1
Q ss_pred eeccCCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 180 YMCYTCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 180 ~~C~~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.....|...||..|+..- .. ....|+.|...+
T Consensus 22 ~~~~~CgH~fc~~Ci~~~--~~---~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 22 AHVLPCGHLLHRTCYEEM--LK---EGYRCPLCSGPS 53 (55)
T ss_dssp EEECTTSCEEETTHHHHH--HH---HTCCCTTSCCSS
T ss_pred eEecCCCCcccHHHHHHH--HH---cCCcCCCCCCcC
Confidence 455678999999998631 11 116788887653
No 175
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=20.44 E-value=1.2e+02 Score=22.37 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHh
Q 041992 410 KAMSLQALRVNDLLESEILRLNNLRD 435 (473)
Q Consensus 410 ka~~l~~~~~~~wi~~e~~rl~~l~d 435 (473)
|-+.||..-.-.+|++||.-|.+-|+
T Consensus 23 kkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 23 KKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 44567777777899999999988775
No 176
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.41 E-value=78 Score=24.52 Aligned_cols=28 Identities=18% Similarity=0.490 Sum_probs=17.2
Q ss_pred cccccccccccc---CceeecCCCCCCCccccccc
Q 041992 120 EEEDVCFICFDG---GSLVLCDRKGCPKAYHPACI 151 (473)
Q Consensus 120 ~ned~CfVC~dG---GeLv~CD~~gCPraYH~~CL 151 (473)
.....|..|+.. ++.+.-. .+.||..|.
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~a~----~~~wH~~CF 43 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLCVN----GHFFHRSCF 43 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCCBT----TBCCBTTTC
T ss_pred CCCCCCcccCCCcccceEEEEC----CCeeCCCcC
Confidence 345678888763 4555433 567787664
No 177
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=20.37 E-value=78 Score=26.07 Aligned_cols=11 Identities=27% Similarity=0.292 Sum_probs=9.4
Q ss_pred eeecCCCCcch
Q 041992 206 KGFCGICMRTI 216 (473)
Q Consensus 206 kwfC~~C~~~~ 216 (473)
..||..|..++
T Consensus 51 ~yFC~~C~~Li 61 (81)
T 2jrp_A 51 DYFCQNGHGLI 61 (81)
T ss_dssp EECCTTTTCCC
T ss_pred CeeeccCCCEe
Confidence 68999999875
No 178
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=20.16 E-value=29 Score=29.60 Aligned_cols=28 Identities=32% Similarity=0.656 Sum_probs=19.1
Q ss_pred CCCccccccccCCCccccccCCeeecCCCCcch
Q 041992 184 TCTYSLCKGCTKGADYYSLRGNKGFCGICMRTI 216 (473)
Q Consensus 184 ~Cp~AyH~~CL~~~~~~sv~~~kwfC~~C~~~~ 216 (473)
.|+..||..|+.. .-.....|+.|...+
T Consensus 70 ~CgH~fc~~Ci~~-----~~~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 70 NCAHSFCSYCINE-----WMKRKIECPICRKDI 97 (138)
T ss_dssp TTSCEEEHHHHHH-----HTTTCSBCTTTCCBC
T ss_pred CCCCCccHHHHHH-----HHHcCCcCCCCCCcC
Confidence 4788899999852 112345699998764
No 179
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=20.07 E-value=59 Score=23.67 Aligned_cols=27 Identities=26% Similarity=0.507 Sum_probs=13.9
Q ss_pred CCCceeecCcccccccCCceeeccCCC
Q 041992 160 SKAKWNCGWHICSICEKASYYMCYTCT 186 (473)
Q Consensus 160 p~g~W~CP~H~C~vC~k~sl~~C~~Cp 186 (473)
..|+|.||.-.|..=.=.....|.+|.
T Consensus 11 ~~GDW~C~~~~C~~~Nfa~R~~C~~C~ 37 (45)
T 1n0z_A 11 SDGDWICPDKKCGNVNFARRTSCDRCG 37 (45)
T ss_dssp CSSSCBCSSTTTCCBCCSSCSBCSSSC
T ss_pred CCCCcCCCCCCCCCEEccccccccccC
Confidence 579999994333222222244555554
Done!