Query 041993
Match_columns 391
No_of_seqs 176 out of 1657
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 22:21:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 1.6E-62 5.5E-67 487.1 36.4 330 19-367 20-414 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1E-58 3.5E-63 458.2 40.9 333 22-381 16-357 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 1.2E-57 4E-62 445.9 39.1 327 24-379 12-374 (376)
4 1czf_A Polygalacturonase II; b 100.0 2.7E-57 9.1E-62 439.3 35.3 323 23-379 26-358 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 1E-54 3.6E-59 447.7 39.6 331 21-366 151-564 (608)
6 2iq7_A Endopolygalacturonase; 100.0 7E-55 2.4E-59 419.9 35.5 318 41-379 6-333 (339)
7 1nhc_A Polygalacturonase I; be 100.0 8.3E-55 2.8E-59 418.9 35.0 317 41-379 6-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 3.4E-54 1.2E-58 416.2 39.0 318 42-379 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 3.3E-54 1.1E-58 415.0 38.4 325 24-379 1-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 5.2E-54 1.8E-58 412.1 25.5 310 43-380 8-330 (335)
11 2x6w_A Tail spike protein; vir 100.0 8.1E-47 2.8E-51 376.9 19.4 294 22-367 47-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 1.7E-40 5.8E-45 336.3 19.7 300 31-366 147-521 (549)
13 3gq8_A Preneck appendage prote 100.0 1.7E-37 5.8E-42 311.4 28.9 306 21-367 17-372 (609)
14 1ogo_X Dextranase; hydrolase, 100.0 6.5E-38 2.2E-42 317.1 25.6 267 57-366 229-546 (574)
15 3gqn_A Preneck appendage prote 100.0 4.5E-37 1.5E-41 312.6 27.1 306 21-367 17-372 (772)
16 1h80_A IOTA-carrageenase; hydr 100.0 5.3E-36 1.8E-40 296.7 28.6 297 22-365 17-360 (464)
17 2pyg_A Poly(beta-D-mannuronate 100.0 7.3E-29 2.5E-33 242.8 27.1 302 26-366 2-360 (377)
18 2vbk_A Tailspike-protein; vira 100.0 6.6E-30 2.3E-34 242.8 16.0 210 24-270 49-286 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 1.9E-24 6.6E-29 214.2 21.7 229 107-366 191-444 (448)
20 2uvf_A Exopolygalacturonase; G 99.9 1.5E-21 5E-26 201.0 28.9 247 107-388 332-607 (608)
21 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.4E-21 4.9E-26 199.2 25.0 265 23-336 46-328 (758)
22 1ia5_A Polygalacturonase; glyc 99.9 6.4E-20 2.2E-24 176.1 28.4 202 147-374 66-306 (339)
23 1czf_A Polygalacturonase II; b 99.9 5.6E-20 1.9E-24 177.7 26.3 202 147-375 89-330 (362)
24 2iq7_A Endopolygalacturonase; 99.9 1.4E-19 4.6E-24 174.0 28.7 202 147-374 62-304 (339)
25 1nhc_A Polygalacturonase I; be 99.9 2.8E-19 9.5E-24 171.6 28.6 201 147-374 62-303 (336)
26 1bhe_A PEHA, polygalacturonase 99.9 7.4E-19 2.5E-23 171.4 30.6 218 84-338 110-364 (376)
27 1rmg_A Rgase A, rhamnogalactur 99.8 9.6E-18 3.3E-22 165.4 35.6 170 169-367 128-311 (422)
28 1hg8_A Endopolygalacturonase; 99.8 3.4E-18 1.2E-22 164.7 25.9 203 147-375 63-317 (349)
29 1k5c_A Endopolygalacturonase; 99.8 1.8E-18 6.1E-23 165.5 21.6 199 147-375 60-301 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 5.5E-17 1.9E-21 164.3 23.4 234 59-338 264-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 1E-16 3.5E-21 162.3 22.5 248 58-338 221-521 (549)
32 2inu_A Insulin fructotransfera 99.6 1.3E-14 4.4E-19 138.8 17.7 233 20-277 8-283 (410)
33 3gq8_A Preneck appendage prote 99.5 3.2E-11 1.1E-15 121.5 28.5 223 106-366 134-400 (609)
34 3gqn_A Preneck appendage prote 99.4 4.3E-11 1.5E-15 122.5 27.9 223 106-366 134-400 (772)
35 1h80_A IOTA-carrageenase; hydr 99.4 5.1E-12 1.7E-16 125.1 18.7 159 151-347 106-279 (464)
36 1ru4_A Pectate lyase, PEL9A; p 99.4 1.8E-11 6.3E-16 119.4 19.5 250 19-306 9-299 (400)
37 2pyg_A Poly(beta-D-mannuronate 99.3 1.2E-10 4.1E-15 113.3 22.7 200 113-347 132-368 (377)
38 1dbg_A Chondroitinase B; beta 99.3 1.8E-10 6.3E-15 115.1 21.5 236 1-277 1-272 (506)
39 2x6w_A Tail spike protein; vir 99.3 6.2E-11 2.1E-15 118.9 17.7 226 84-362 151-408 (600)
40 3eqn_A Glucan 1,3-beta-glucosi 99.2 1.1E-10 3.7E-15 119.6 13.0 97 22-128 396-501 (758)
41 3uw0_A Pectinesterase; right-h 98.7 2.8E-07 9.7E-12 88.2 16.1 152 42-237 43-218 (364)
42 1pcl_A Pectate lyase E; lyase 98.7 9.4E-07 3.2E-11 84.5 18.2 77 194-270 132-228 (355)
43 2qy1_A Pectate lyase II; GAG l 98.7 7.2E-07 2.5E-11 84.7 16.6 93 176-269 94-204 (330)
44 3zsc_A Pectate trisaccharide-l 98.6 3.1E-06 1.1E-10 80.1 19.9 53 194-246 115-169 (340)
45 1pxz_A Major pollen allergen J 98.6 8.5E-07 2.9E-11 84.6 15.4 116 147-269 107-226 (346)
46 3vmv_A Pectate lyase; polysacc 98.6 4E-06 1.4E-10 79.0 19.0 92 175-269 101-204 (326)
47 1gq8_A Pectinesterase; hydrola 98.5 9.6E-06 3.3E-10 76.4 19.1 200 42-299 18-243 (319)
48 1idk_A Pectin lyase A; signal, 98.5 2.3E-06 7.9E-11 81.9 14.7 63 175-237 131-197 (359)
49 1xg2_A Pectinesterase 1; prote 98.5 7.4E-06 2.5E-10 77.1 17.6 199 42-299 14-239 (317)
50 1pxz_A Major pollen allergen J 98.4 2.9E-06 9.8E-11 81.0 14.0 133 153-299 87-226 (346)
51 3zsc_A Pectate trisaccharide-l 98.4 1.7E-05 5.7E-10 75.1 18.6 133 146-301 83-251 (340)
52 2x3h_A K5 lyase, K5A lyase; ba 98.4 0.00018 6.1E-09 65.5 23.6 231 23-292 61-309 (542)
53 1air_A Pectate lyase C, PELC; 98.3 9.5E-06 3.2E-10 77.5 14.7 95 171-269 105-215 (353)
54 2nsp_A Pectinesterase A; micha 98.3 4.8E-05 1.6E-09 72.4 18.6 148 42-237 17-191 (342)
55 1qcx_A Pectin lyase B; beta-he 98.2 4.1E-05 1.4E-09 73.3 16.9 135 148-304 126-284 (359)
56 1air_A Pectate lyase C, PELC; 98.2 9.6E-06 3.3E-10 77.4 12.5 139 147-303 104-264 (353)
57 1vbl_A Pectate lyase 47; PL 47 98.2 7.2E-06 2.5E-10 79.8 10.8 99 171-269 150-282 (416)
58 1qcx_A Pectin lyase B; beta-he 98.2 1E-05 3.6E-10 77.4 11.1 92 170-270 125-234 (359)
59 2o04_A Pectate lyase, PL; hexa 98.1 1.2E-05 4.3E-10 77.8 10.4 99 170-269 144-276 (399)
60 1idk_A Pectin lyase A; signal, 98.1 9.7E-05 3.3E-09 70.6 15.7 136 147-304 125-284 (359)
61 1pe9_A Pectate lyase A; parall 98.0 2.6E-05 8.7E-10 74.6 10.9 76 194-269 142-238 (361)
62 1pe9_A Pectate lyase A; parall 97.9 0.00012 4E-09 70.0 13.5 108 151-268 111-259 (361)
63 2inu_A Insulin fructotransfera 97.8 0.00012 4.2E-09 70.1 11.9 129 154-304 136-280 (410)
64 3vmv_A Pectate lyase; polysacc 97.8 0.00051 1.8E-08 64.6 16.1 134 148-299 97-249 (326)
65 1pcl_A Pectate lyase E; lyase 97.8 0.00034 1.2E-08 66.7 14.9 113 147-269 97-249 (355)
66 1vbl_A Pectate lyase 47; PL 47 97.7 0.00023 8E-09 69.2 11.6 113 147-269 149-304 (416)
67 1ru4_A Pectate lyase, PEL9A; p 97.6 0.00014 5E-09 70.6 9.2 110 147-270 109-231 (400)
68 2qy1_A Pectate lyase II; GAG l 97.5 0.00038 1.3E-08 65.9 9.6 140 147-304 87-254 (330)
69 2o04_A Pectate lyase, PL; hexa 97.5 0.0044 1.5E-07 59.9 17.0 111 148-269 145-298 (399)
70 3grh_A YBHC, acyl-COA thioeste 97.1 0.048 1.6E-06 52.6 19.8 137 149-299 196-362 (422)
71 2vbk_A Tailspike-protein; vira 96.7 0.0082 2.8E-07 57.9 10.4 76 147-240 197-286 (514)
72 3t9g_A Pectate lyase; PL3, par 96.4 0.3 1E-05 41.5 16.9 128 178-335 53-183 (196)
73 1dbg_A Chondroitinase B; beta 96.0 0.043 1.5E-06 54.7 11.3 142 152-300 226-392 (506)
74 3t9g_A Pectate lyase; PL3, par 95.7 0.84 2.9E-05 38.8 16.3 133 152-300 50-182 (196)
75 1ee6_A Pectate lyase; parallel 95.4 0.45 1.6E-05 40.6 13.8 78 153-236 47-124 (197)
76 1gq8_A Pectinesterase; hydrola 95.4 0.11 3.8E-06 48.6 11.0 112 175-300 92-210 (319)
77 3b4n_A Endo-pectate lyase; pec 95.2 1.5 5.3E-05 40.5 17.5 16 116-131 124-139 (344)
78 1xg2_A Pectinesterase 1; prote 95.0 0.11 3.9E-06 48.5 9.8 112 175-300 88-206 (317)
79 2nsp_A Pectinesterase A; micha 92.3 1.7 5.9E-05 40.9 12.7 110 175-299 94-230 (342)
80 1ee6_A Pectate lyase; parallel 92.2 2.7 9.2E-05 35.8 12.4 106 177-302 48-156 (197)
81 3uw0_A Pectinesterase; right-h 91.7 1.6 5.6E-05 41.4 11.8 113 175-299 120-255 (364)
82 2vfm_A Bifunctional tail prote 91.1 7.1 0.00024 36.3 14.8 67 226-295 269-352 (559)
83 2v5i_A Salmonella typhimurium 90.9 6.7 0.00023 36.5 14.4 67 226-295 272-355 (559)
84 2xc1_A Bifunctional tail prote 89.1 10 0.00035 36.7 14.5 67 226-295 376-459 (666)
85 3grh_A YBHC, acyl-COA thioeste 81.9 12 0.00041 36.0 11.4 124 175-310 199-343 (422)
86 3ju4_A Endo-N-acetylneuraminid 80.0 0.72 2.5E-05 44.1 2.1 38 32-73 4-42 (670)
87 3riq_A Tailspike protein; righ 77.7 50 0.0017 31.4 13.7 68 226-296 262-344 (543)
88 2vfm_A Bifunctional tail prote 74.8 24 0.00083 32.8 10.5 81 203-299 269-373 (559)
89 3b4n_A Endo-pectate lyase; pec 73.5 38 0.0013 31.3 11.5 52 178-236 159-211 (344)
90 2v5i_A Salmonella typhimurium 71.9 23 0.00077 33.0 9.6 81 203-299 272-376 (559)
91 2xc1_A Bifunctional tail prote 69.0 35 0.0012 33.1 10.5 81 203-299 376-480 (666)
92 3riq_A Tailspike protein; righ 65.4 44 0.0015 31.8 10.2 60 203-265 262-343 (543)
93 2yuh_A Tubulin-specific chaper 34.9 38 0.0013 28.4 4.2 11 148-158 71-81 (179)
94 2x3h_A K5 lyase, K5A lyase; ba 20.9 4.8E+02 0.016 23.8 19.5 145 146-306 129-295 (542)
95 3bh7_B Protein XRP2; protein-p 20.1 1.5E+02 0.0051 27.6 5.7 11 148-158 102-112 (352)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=1.6e-62 Score=487.11 Aligned_cols=330 Identities=24% Similarity=0.399 Sum_probs=294.3
Q ss_pred ccCCCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCCccCccEEEEEccEEEeccC
Q 041993 19 SSLAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGPCKNNRITIRIDGTLVAPSD 98 (391)
Q Consensus 19 ~~~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~ 98 (391)
.+...+++++|++|||++||.+|||+|||+||++ |++.++++|+||+|+|+++++.|+ | +++|+++|+|+++++
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~-c~~~ggg~v~vP~G~yl~~~l~l~----s-~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIEE-LSKQGGGRLIVPEGVFLTGPIHLK----S-NIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHHH-HHHHTCEEEEECSSEEEESCEECC----T-TEEEEESSEEEECCC
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHHh-hhhcCCeEEEECCCcEEEeeeEeC----C-CcEEEEEEEEEecCC
Confidence 4456778999999999999999999999999965 666678999999999999999997 7 999999999999999
Q ss_pred cccc-CC------------CCceEEEEeeeeeEEec-eeEeCCC--ccccccccC-------------------------
Q 041993 99 YRVI-GN------------AGNWLFFQHVDGVTLNS-GILDGQG--TALWACKNS------------------------- 137 (391)
Q Consensus 99 ~~~~-~~------------~~~~i~~~~~~ni~I~G-G~idg~g--~~~w~~~~~------------------------- 137 (391)
+..| +. ..+||.+.+++||.|+| |+|||+| +.||+....
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 9888 32 13689999999999999 9999999 889974321
Q ss_pred ---------CCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEE
Q 041993 138 ---------GKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTI 208 (391)
Q Consensus 138 ---------~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 208 (391)
+.....||++|.+.+|+|++|+|++++|+|.|++++..|+|++|++++|.++ ++++||||+.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 0123478999999999999999999999999999999999999999999986 57999999999999999
Q ss_pred EeeEEecCCceEEeCCC-----------ceeEEEEeeEE--cCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEE
Q 041993 209 LNTRISTGDDCVSIGPG-----------TSNLWIENVAC--GPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLR 274 (391)
Q Consensus 209 ~n~~i~~~dD~i~i~~~-----------~~nv~i~n~~~--~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~ 274 (391)
+||+|.++||||+++++ ++||+|+||+| ..+| |++|||++ .++++||+|+||++.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEE
Confidence 99999999999999997 89999999999 5566 89999983 5689999999999999999999
Q ss_pred EEEecCCCCeeEEEEEEEEEEEecCCccE-EEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEecCCCCce
Q 041993 275 IKSWGRPSNGFARNILFRNAIMKNVQNPI-IIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDCSSKYPC 353 (391)
Q Consensus 275 i~~~~~~~~g~i~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~ 353 (391)
||++.+ ++|.++||+|+|++|+++.+++ .|++.|... + ....+.++||+|+||+++. ...++.+.|.++.||
T Consensus 328 IKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~---~--~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~ 400 (448)
T 3jur_A 328 LKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE---E--GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYV 400 (448)
T ss_dssp EECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGC---C--CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCE
T ss_pred EEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCC---C--CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCE
Confidence 999877 7799999999999999999988 999988753 1 1234589999999999998 456999999999999
Q ss_pred ecEEEEeeEEEecC
Q 041993 354 SRIRLEDVKLTYKN 367 (391)
Q Consensus 354 ~~v~~~nv~v~~~~ 367 (391)
+||+|+||+++..+
T Consensus 401 ~~I~~~nv~i~~~~ 414 (448)
T 3jur_A 401 KDILISDTIIEGAK 414 (448)
T ss_dssp EEEEEEEEEEESCS
T ss_pred eeEEEEEEEEEccc
Confidence 99999999999644
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1e-58 Score=458.18 Aligned_cols=333 Identities=25% Similarity=0.464 Sum_probs=289.9
Q ss_pred CCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEee-eeeeCCccCccEEEEEccEEEeccCcc
Q 041993 22 AAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRN-VAFQGPCKNNRITIRIDGTLVAPSDYR 100 (391)
Q Consensus 22 ~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~-~~l~~~~~s~~~~l~~~G~l~~~~~~~ 100 (391)
++.++++|++|||++||.+|||+|||+||+ +|+ ++++|+||+|+|++++ +.|++. + +++|+++|++....+..
T Consensus 16 ~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--~g~~V~vP~G~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~ 89 (422)
T 1rmg_A 16 GATKTCNILSYGAVADNSTDVGPAITSAWA-ACK--SGGLVYIPSGNYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS 89 (422)
T ss_dssp HHHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--BTCEEEECSSEEEECSCEEEESC--E-EEEEEECSEEEECCCCS
T ss_pred cCCcEEEeeeccccCCCCcccHHHHHHHHH-HCC--CCCEEEECCCeEEeCCceeecCC--C-eEEEEEcCcEEcccCCC
Confidence 346689999999999999999999999997 465 4889999999999986 999875 6 89999999877654321
Q ss_pred ccCCCCceEE---EEeeeeeEEec-eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEece
Q 041993 101 VIGNAGNWLF---FQHVDGVTLNS-GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGC 176 (391)
Q Consensus 101 ~~~~~~~~i~---~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~ 176 (391)
+.++. ..+++++.|+| |+|||+|+.||.. ...||.+|++.+|+|++|+|++++|++.|++++..|
T Consensus 90 -----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~------~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~ 158 (422)
T 1rmg_A 90 -----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAE------GTYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTC 158 (422)
T ss_dssp -----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTT------TCCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEE
T ss_pred -----CceEEEEecCceeEEeeccCEEEECCcchhhcC------CCCCceEEEEcccceEEEECeEEECCCceEEEEeCc
Confidence 23444 45566667789 9999999999953 123899999999999999999999999999999999
Q ss_pred eeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCcE
Q 041993 177 NNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAGV 256 (391)
Q Consensus 177 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i 256 (391)
+|++|+|++|.+ .+.+++|||++++ +||+|+||+|.++||||+++++++||+|+||+|..+||++|||++.+ +.+
T Consensus 159 ~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v 233 (422)
T 1rmg_A 159 SDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDV 233 (422)
T ss_dssp EEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEE
T ss_pred CCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcE
Confidence 999999999999 4557999999999 99999999999999999999999999999999999999999998643 479
Q ss_pred EEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEe
Q 041993 257 QNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGT 336 (391)
Q Consensus 257 ~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~ 336 (391)
+||+|+||+|.++.+|++||++.+ .|.++||+|+|++|++..++|.+.+.|.... ......+.|+||+|+||+++
T Consensus 234 ~nV~v~n~~~~~~~~Gi~Ikt~~g--~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~gt 308 (422)
T 1rmg_A 234 TDIVYRNVYTWSSNQMYMIKSNGG--SGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKGT 308 (422)
T ss_dssp EEEEEEEEEEESSSCSEEEEEBBC--CEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEEE
T ss_pred EEEEEEeEEEeccceEEEEEecCC--CcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEEE
Confidence 999999999999999999999743 5899999999999999999999999886521 12345679999999999999
Q ss_pred eCC---cceEEEecCCCCceecEEEEeeEEEecC-CCccceeecccccC
Q 041993 337 SAT---EVAVNFDCSSKYPCSRIRLEDVKLTYKN-QPAAASCSHADGSA 381 (391)
Q Consensus 337 ~~~---~~~~~i~~~~~~~~~~v~~~nv~v~~~~-~~~~~~c~~~~g~~ 381 (391)
... ..++.+.|.++.+|+||+|+||++..++ +.+...|.|++|..
T Consensus 309 ~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~g 357 (422)
T 1rmg_A 309 EANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGSG 357 (422)
T ss_dssp ESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEES
T ss_pred ecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCccc
Confidence 853 3589999999999999999999999876 55679999999753
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.2e-57 Score=445.90 Aligned_cols=327 Identities=27% Similarity=0.413 Sum_probs=287.7
Q ss_pred CCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcC---CeEEEeeeeeeCCccCccEEEEEcc--EEEeccC
Q 041993 24 PPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPP---GRFFLRNVAFQGPCKNNRITIRIDG--TLVAPSD 98 (391)
Q Consensus 24 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~---G~Y~~~~~~l~~~~~s~~~~l~~~G--~l~~~~~ 98 (391)
+.+++|++|| .+|||+|||+||+ +|++ |++|+||+ |+|+++++.|+ | +++|++++ +|+++++
T Consensus 12 p~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~----s-~vtL~l~~Ga~L~~s~~ 78 (376)
T 1bhe_A 12 PSSCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLP----S-GVSLLIDKGVTLRAVNN 78 (376)
T ss_dssp CCEEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECC----T-TCEEEECTTCEEEECSC
T ss_pred CCeEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEEC----C-CCEEEECCCeEEEeCCC
Confidence 3479999987 4799999999996 5775 56676664 79999999998 7 99999995 9999998
Q ss_pred ccccCCC--------------CceEEEEeeeeeEEec-eeEeCCC--------ccccccccC---CCCCCCCCeeEEEEe
Q 041993 99 YRVIGNA--------------GNWLFFQHVDGVTLNS-GILDGQG--------TALWACKNS---GKNCPSGATSMGFSN 152 (391)
Q Consensus 99 ~~~~~~~--------------~~~i~~~~~~ni~I~G-G~idg~g--------~~~w~~~~~---~~~~~~~~~~i~~~~ 152 (391)
+..|+.. .+||.+.+++||+|+| |+|||+| +.||+.... ......+|++|.+.+
T Consensus 79 ~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 79 AKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp SGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred HHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 8888632 4789999999999999 9999999 578974210 011235899999999
Q ss_pred ecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCC-----Cce
Q 041993 153 CNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGP-----GTS 227 (391)
Q Consensus 153 ~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~-----~~~ 227 (391)
|+|++|++++++|+|.|++++..|++++|+|++|.++.+++++||||+++|+||+|+||+|.++||||++++ +++
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~ 238 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETR 238 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEE
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCce
Confidence 999999999999999999999999999999999999888899999999999999999999999999999995 699
Q ss_pred eEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEe
Q 041993 228 NLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQ 307 (391)
Q Consensus 228 nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~ 307 (391)
||+|+||+|..+||++|||+. . +++||+|+||+|.++..|++||++.+ ++|.++||+|+|++|+++.+||.|++
T Consensus 239 nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~~ 312 (376)
T 1bhe_A 239 NISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVIDT 312 (376)
T ss_dssp EEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEET
T ss_pred EEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEEe
Confidence 999999999999999999983 2 89999999999999999999999977 78999999999999999999999999
Q ss_pred eeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEecCCCCceecEEEEeeEEEecCCCccceeecccc
Q 041993 308 NYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDCSSKYPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
.|.+.. ....+.|+||+|+||+++... ++.+.|.++.||++|+|+||++... ..+.|+|++.
T Consensus 313 ~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~---~~~~~~~~~~ 374 (376)
T 1bhe_A 313 VYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD---STWQIKNVNV 374 (376)
T ss_dssp TSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT---CEEEEESEEE
T ss_pred eccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC---CCceEEEEEe
Confidence 887531 123458999999999999764 7899999999999999999999965 3799999864
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.7e-57 Score=439.25 Aligned_cols=323 Identities=23% Similarity=0.416 Sum_probs=278.7
Q ss_pred CCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeee-eeeCCccCccEEEEEccEEEeccCccc
Q 041993 23 APPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNV-AFQGPCKNNRITIRIDGTLVAPSDYRV 101 (391)
Q Consensus 23 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~ 101 (391)
..++++|++ ++|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..
T Consensus 26 ~~~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~ 84 (362)
T 1czf_A 26 ARDSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAGTTLD--LTGLT----S-GTKVIFEGTTTF--QYEE 84 (362)
T ss_dssp --CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCC
T ss_pred CCCEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCCEEEE--eeccC----C-CeEEEEeCcEEe--cccc
Confidence 345788854 789999995 5787778899999999973 3 444 6 899999998876 3456
Q ss_pred cCCCCceEEEEeeeeeEEec---eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceee
Q 041993 102 IGNAGNWLFFQHVDGVTLNS---GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNN 178 (391)
Q Consensus 102 ~~~~~~~i~~~~~~ni~I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~n 178 (391)
|. ++|+.+. .+||+|+| |+|||+|+.||+.... ....||+++++.+|+|++|+|++++|+|.|++++. |+|
T Consensus 85 w~--g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~n 158 (362)
T 1czf_A 85 WA--GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-AND 158 (362)
T ss_dssp SC--CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSS
T ss_pred CC--CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCC
Confidence 66 4689885 59999999 8999999999985432 25679999999999999999999999999999999 999
Q ss_pred EEEEeEEEEcCC-C---CCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCC
Q 041993 179 VKLKGVKVLASG-N---SPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEA 254 (391)
Q Consensus 179 v~i~n~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~ 254 (391)
++|+|++|.++. + ++++||||+++|+||+|+||+++++||||++++ .+||+|+||+|..+||++|||+|.+ +.+
T Consensus 159 v~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~ 236 (362)
T 1czf_A 159 ITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNN 236 (362)
T ss_dssp EEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCC
T ss_pred EEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCC
Confidence 999999999964 3 789999999999999999999999999999999 5999999999999999999999776 457
Q ss_pred cEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCC-ccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeE
Q 041993 255 GVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDV 333 (391)
Q Consensus 255 ~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni 333 (391)
.++||+|+||+|.++.+|++||++++ +.|.++||+|+|++|+++. +||.|++.|.+.. .+..+.....|+||+|+||
T Consensus 237 ~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni 314 (362)
T 1czf_A 237 VVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESV 314 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEE
T ss_pred CEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEE
Confidence 89999999999999999999999987 7899999999999999987 7999999987632 1122234578999999999
Q ss_pred EEeeCC-cceEEEecCCCCceecEEEEeeEEEecCCCccceeecccc
Q 041993 334 HGTSAT-EVAVNFDCSSKYPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 334 ~~~~~~-~~~~~i~~~~~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
+++... ..++.+.|+ +.||+||+|+||+++. +.....|.|++.
T Consensus 315 ~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 358 (362)
T 1czf_A 315 TGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTG--GKKSTACKNFPS 358 (362)
T ss_dssp EEEECTTSEEEEEECC-TTTEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EEEecCCceEEEEEeC-CCcCcCEEEEeEEEEc--CCCcccCcCCCC
Confidence 999876 568999998 7899999999999995 345678999885
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1e-54 Score=447.68 Aligned_cols=331 Identities=24% Similarity=0.363 Sum_probs=273.4
Q ss_pred CCCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCCccCccEEEEEc--cEEEeccC
Q 041993 21 LAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGPCKNNRITIRID--GTLVAPSD 98 (391)
Q Consensus 21 ~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~~~ 98 (391)
.+.++.++|++|||++||.+|||+|||+||+ +|+. +++|+||+|+|+++++.|+ | +++|+++ ++|+++.+
T Consensus 151 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lk----s-~v~L~l~~gatL~~s~d 222 (608)
T 2uvf_A 151 SAKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLK----S-DMTLNLQAGAILLGSEN 222 (608)
T ss_dssp CCCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECC----S-SEEEEECTTEEEEECSC
T ss_pred ccCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceecc----C-ceEEEecCCcEEEecCC
Confidence 4566789999999999999999999999996 5765 8999999999999999997 7 9999995 69999998
Q ss_pred ccccCCC------------CceEEEEe--------eeeeEEec-eeEeCCCccccccc----cCCC--------------
Q 041993 99 YRVIGNA------------GNWLFFQH--------VDGVTLNS-GILDGQGTALWACK----NSGK-------------- 139 (391)
Q Consensus 99 ~~~~~~~------------~~~i~~~~--------~~ni~I~G-G~idg~g~~~w~~~----~~~~-------------- 139 (391)
...|+.. .++|.+.+ ++||+|+| |+|||+|+.||... ..+.
T Consensus 223 ~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~ 302 (608)
T 2uvf_A 223 PDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVH 302 (608)
T ss_dssp GGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHH
T ss_pred HHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccccccccccccccccccccc
Confidence 8777521 25788877 79999999 99999999887421 0000
Q ss_pred ------------------C-----CCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCC
Q 041993 140 ------------------N-----CPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTD 196 (391)
Q Consensus 140 ------------------~-----~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~D 196 (391)
. ...||.+|.+.+|+|++|+|++++|++.|++++..|+|++|+|+++.. .+++|+|
T Consensus 303 ~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtD 381 (608)
T 2uvf_A 303 EDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGD 381 (608)
T ss_dssp HHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCC
T ss_pred ccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCC
Confidence 0 014899999999999999999999999999999999999999999865 4568999
Q ss_pred ceeeeccccEEEEeeEEecCCceEEeCCC----------ceeEEEEeeEEcCCce-EEEeecCCCCCCCcEEEEEEEeeE
Q 041993 197 GIHVQLSSDVTILNTRISTGDDCVSIGPG----------TSNLWIENVACGPGHG-ISIGSLGKDLNEAGVQNVTVKTVT 265 (391)
Q Consensus 197 Gi~~~~s~nv~I~n~~i~~~dD~i~i~~~----------~~nv~i~n~~~~~~~g-i~igs~g~~~~~~~i~nI~i~n~~ 265 (391)
||++++|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.|||+ ..++++||+|+||+
T Consensus 382 Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~ 457 (608)
T 2uvf_A 382 GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNV 457 (608)
T ss_dssp SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCE
T ss_pred eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEE
Confidence 99999999999999999999999999875 7999999999999998 468996 46789999999999
Q ss_pred EeCCceEEEEEEecCCCCeeEEEEEEEEEEEecC-CccEEEEeeeCCCCCC---CCCCCcceEEEeEEEEeEEEeeCCc-
Q 041993 266 FTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNV-QNPIIIDQNYCPDNIG---CPGQVSGVKISDVTYQDVHGTSATE- 340 (391)
Q Consensus 266 ~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~-~~~i~i~~~~~~~~~~---~~~~~~~~~i~nI~~~ni~~~~~~~- 340 (391)
+.++.+|++||++.+ ++|.++||+|+|++|+++ .+||.|++.|...... .+ ....+.++||+|+||+......
T Consensus 458 ~~~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~-~~~~~~~~~V~i~nI~~~n~~gt 535 (608)
T 2uvf_A 458 MYLTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPP-AKIPAQFYDFTLKNVTVDNSTGK 535 (608)
T ss_dssp EESCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCC-CSSCCEEEEEEEEEEEEEEECSS
T ss_pred EECCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCC-cCCCCccccEEEEeEEEEeeece
Confidence 999999999999977 778999999999999999 5999999999753220 11 0112346666666666554432
Q ss_pred -ceEEEe--cCCCCceecEEEEeeEEEec
Q 041993 341 -VAVNFD--CSSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 341 -~~~~i~--~~~~~~~~~v~~~nv~v~~~ 366 (391)
.++.+. |.+..||+||+|+||+++..
T Consensus 536 ~~~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 536 NPSIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp SCSEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred EEeEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 345554 44556788888888887754
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=7e-55 Score=419.93 Aligned_cols=318 Identities=24% Similarity=0.407 Sum_probs=275.2
Q ss_pred ccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeee-eeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeeeEE
Q 041993 41 DSTKAFLSAWANACGSPRAATIYVPPGRFFLRNV-AFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTL 119 (391)
Q Consensus 41 d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I 119 (391)
.||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+.+ +||+|
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAGTTLD--MTGLK----S-GTTVTFQGKTTF--GYKEWE--GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-ccEEE
Confidence 47999999995 5787778899999999974 3 444 6 899999998876 345665 46888875 99999
Q ss_pred ec---eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCC----C
Q 041993 120 NS---GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGN----S 192 (391)
Q Consensus 120 ~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~----~ 192 (391)
+| |+|||+|+.||+.... .....||++|.+.+|+|++|++++++|+|.|++++..|+|++|++++|.++.+ +
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 151 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKGS-NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGG 151 (339)
T ss_dssp EECTTCEEECCGGGTCCSCGG-GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTC
T ss_pred EcCCCCEEECCcccccccccc-cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccC
Confidence 99 6999999999985432 12456899999999999999999999999999999999999999999999743 6
Q ss_pred CCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceE
Q 041993 193 PNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNG 272 (391)
Q Consensus 193 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~g 272 (391)
+++|||++++|+||+|+||+|.++||||++++ .+||+|+||+|..+||++|||+|.+ ..+.++||+|+||+|.++.+|
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~g 229 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNG 229 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 6999999999999999999998766 457899999999999999999
Q ss_pred EEEEEecCCCCeeEEEEEEEEEEEecCCc-cEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-cceEEEecCCC
Q 041993 273 LRIKSWGRPSNGFARNILFRNAIMKNVQN-PIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSAT-EVAVNFDCSSK 350 (391)
Q Consensus 273 i~i~~~~~~~~g~i~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~~ 350 (391)
++||++.+ +.|.++||+|+|++|+++.. ||.|++.|.+.. .+..+.....|+||+|+||+++... ..++.+.|+ +
T Consensus 230 irIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~-~ 306 (339)
T 2iq7_A 230 VRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA-S 306 (339)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999977 78999999999999999886 999999987621 1112234568999999999999886 568999995 8
Q ss_pred CceecEEEEeeEEEecCCCccceeecccc
Q 041993 351 YPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 351 ~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
.||+||+|+||+++. +.....|.|++.
T Consensus 307 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 333 (339)
T 2iq7_A 307 GACSNWKWSGVSVTG--GKKSTKCSNIPS 333 (339)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBCCCT
T ss_pred CcEecEEEEeEEEEc--CCCcccccCCCC
Confidence 899999999999995 345678999874
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=8.3e-55 Score=418.90 Aligned_cols=317 Identities=25% Similarity=0.427 Sum_probs=274.7
Q ss_pred ccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeee-eeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeeeEE
Q 041993 41 DSTKAFLSAWANACGSPRAATIYVPPGRFFLRNV-AFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTL 119 (391)
Q Consensus 41 d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I 119 (391)
.||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+|
T Consensus 6 ~~t~aiq~ai~-~c~~~gg~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~-~~nv~I 72 (336)
T 1nhc_A 6 TSASEASESIS-SCSDVVLSSIEVPAGETLD--LSDAA----D-GSTITFEGTTSF--GYKEWK--GPLIRFG-GKDLTV 72 (336)
T ss_dssp SSHHHHHHHGG-GCSEEEEESCEECTTCCEE--CTTCC----T-TCEEEEESEEEE--CCCCSC--CCSEECC-EESCEE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeceEEc--cccccc--CcEEEEe-cCCEEE
Confidence 57999999995 5787778899999999973 3 444 6 899999998876 345565 4688886 499999
Q ss_pred ec---eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCC----C
Q 041993 120 NS---GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGN----S 192 (391)
Q Consensus 120 ~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~----~ 192 (391)
+| |+|||+|+.||+.... .....||+++.+.+|+|++|++++++|+|.|++++. |+|++|++++|.++.+ +
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~ 150 (336)
T 1nhc_A 73 TMADGAVIDGDGSRWWDSKGT-NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGG 150 (336)
T ss_dssp EECTTCEEECCGGGTCCSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTC
T ss_pred EcCCCeEEECCccccccccCc-CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccC
Confidence 99 6999999999985432 224678999999999999999999999999999999 9999999999999753 7
Q ss_pred CCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceE
Q 041993 193 PNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNG 272 (391)
Q Consensus 193 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~g 272 (391)
+++||||+++|+||+|+||+|.++|||+++++ .+||+|+||+|..+||++|||+|.+ ..+.++||+|+|+++.++.+|
T Consensus 151 ~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~g 228 (336)
T 1nhc_A 151 HNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSANG 228 (336)
T ss_dssp CSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 6999999999999999999998766 457899999999999999999
Q ss_pred EEEEEecCCCCeeEEEEEEEEEEEecCCc-cEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-cceEEEecCCC
Q 041993 273 LRIKSWGRPSNGFARNILFRNAIMKNVQN-PIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSAT-EVAVNFDCSSK 350 (391)
Q Consensus 273 i~i~~~~~~~~g~i~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~~~~~ 350 (391)
++||++.+ +.|.++||+|+|++|+++.. ||.+++.|.+.. .+..+...+.|+||+|+||+++... ..++.+.|+ .
T Consensus 229 irIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~-~ 305 (336)
T 1nhc_A 229 VRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG-D 305 (336)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC-T
T ss_pred EEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC-C
Confidence 99999977 78999999999999999876 999999987621 1112234578999999999999886 568999995 8
Q ss_pred CceecEEEEeeEEEecCCCccceeecccc
Q 041993 351 YPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 351 ~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
.||+||+|+||+++. +.....|.|+++
T Consensus 306 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 332 (336)
T 1nhc_A 306 GSCSDWTWSGVDLSG--GKTSDKCENVPS 332 (336)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CcEecEEEEeEEEEc--CCCCcccCCCCC
Confidence 899999999999995 345678999885
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=3.4e-54 Score=416.17 Aligned_cols=318 Identities=25% Similarity=0.391 Sum_probs=273.7
Q ss_pred cHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeee-eeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeeeEEe
Q 041993 42 STKAFLSAWANACGSPRAATIYVPPGRFFLRNV-AFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTLN 120 (391)
Q Consensus 42 ~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I~ 120 (391)
||+|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. .++|+.+.+ +||+|+
T Consensus 7 ~t~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~-~g~~i~~~~-~ni~I~ 74 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNIVLNGFQVPTGKQLD--LSSLQ----N-DSTVTFKGTTTF--ATTADN-DFNPIVISG-SNITIT 74 (349)
T ss_dssp SGGGHHHHHH-HCSEEEECCCEECTTCCEE--ETTCC----T-TCEEEECSEEEE--CCCCCT-TCCSEEEEE-ESCEEE
T ss_pred CHHHHHHHHH-hccccCCCEEEECCCEEEE--eeccC----C-CeEEEEcCceec--cccccc-CCceEEEEC-ccEEEE
Confidence 7899999996 5787778899999999974 3 444 6 899999998776 335562 257898865 999999
Q ss_pred c---eeEeCCCccccccccCCCCCC-CCCeeEEE-E-eecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCC-C--
Q 041993 121 S---GILDGQGTALWACKNSGKNCP-SGATSMGF-S-NCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASG-N-- 191 (391)
Q Consensus 121 G---G~idg~g~~~w~~~~~~~~~~-~~~~~i~~-~-~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~-~-- 191 (391)
| |+|||+|+.||+..... ... .||++|.+ . .|+|++|++++++|+|.|++++..|+|++|++++|.++. +
T Consensus 75 G~~~G~IdG~G~~ww~~~~~~-~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~ 153 (349)
T 1hg8_A 75 GASGHVIDGNGQAYWDGKGSN-SNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKP 153 (349)
T ss_dssp ECTTCEEECCGGGTCCSCTTC-TTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSC
T ss_pred ecCCCEEcCCcchhhhccccc-CCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccc
Confidence 9 89999999999864331 122 68999999 7 799999999999999999999999999999999999853 2
Q ss_pred ---------CCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEE
Q 041993 192 ---------SPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVK 262 (391)
Q Consensus 192 ---------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~ 262 (391)
++++|||++++|+||+|+||++.++||||++++ ++||+|+||+|..+||++|||+|.+ ..+.++||+|+
T Consensus 154 ~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~ 231 (349)
T 1hg8_A 154 NAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFL 231 (349)
T ss_dssp CTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEE
T ss_pred cccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEE
Confidence 489999999999999999999999999999999 6999999999999999999999876 45789999999
Q ss_pred eeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCC-ccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-c
Q 041993 263 TVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSAT-E 340 (391)
Q Consensus 263 n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~ 340 (391)
|++|.++.+|++||++.+ ++|.++||+|+|++|+++. +||.+++.|.+.. .+..+...+.|+||+|+||+++... .
T Consensus 232 n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~~~ 309 (349)
T 1hg8_A 232 SSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVASSA 309 (349)
T ss_dssp EEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECTTS
T ss_pred EEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCCCC
Confidence 999999999999999977 7899999999999999987 6999999997632 1222234579999999999999876 5
Q ss_pred ceEEEecCCCCceecEEEEeeEEEecCCCccceeecccc
Q 041993 341 VAVNFDCSSKYPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 341 ~~~~i~~~~~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
.++.+.|+ +.||+||+|+||+++. +.....|.|+++
T Consensus 310 ~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 345 (349)
T 1hg8_A 310 QDWFILCG-DGSCSGFTFSGNAITG--GGKTSSCNYPTN 345 (349)
T ss_dssp EEEEEECC-SSCEEEEEEESCEEEC--CSSCCEECSSSS
T ss_pred EEEEEEeC-CCcCcCEEEEeEEEEc--CCCCeeeeCCCC
Confidence 68999998 6899999999999995 344678999876
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.3e-54 Score=414.96 Aligned_cols=325 Identities=22% Similarity=0.411 Sum_probs=278.3
Q ss_pred CCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeee-eeeCCccCccEEEEEccEEEeccCcccc
Q 041993 24 PPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNV-AFQGPCKNNRITIRIDGTLVAPSDYRVI 102 (391)
Q Consensus 24 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~ 102 (391)
|+++.|++. +-++|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|
T Consensus 1 ~~~C~~~~~--------~g~~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w 62 (339)
T 1ia5_A 1 ATTCTFSGS--------NGASSASKSKT-SCSTIVLSNVAVPSGTTLD--LTKLN----D-GTHVIFSGETTF--GYKEW 62 (339)
T ss_dssp CCEEEEEGG--------GHHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCS
T ss_pred CCeEEECCC--------cchHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--ccccc
Confidence 356677541 23679999995 5787778899999999974 3 444 6 999999998876 34566
Q ss_pred CCCCceEEEEeeeeeEEec---eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceeeE
Q 041993 103 GNAGNWLFFQHVDGVTLNS---GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNV 179 (391)
Q Consensus 103 ~~~~~~i~~~~~~ni~I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv 179 (391)
. ++|+.+.+ +||+|+| |+|||+|+.||+.... .....||++|.+.+|+|++|++++++|+|.|++++..|+|+
T Consensus 63 ~--g~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv 138 (339)
T 1ia5_A 63 S--GPLISVSG-SDLTITGASGHSINGDGSRWWDGEGG-NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYL 138 (339)
T ss_dssp C--CCSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEE
T ss_pred c--CcEEEEEc-CcEEEEcCCCeEEeCCCCcccccccc-CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCe
Confidence 5 46888875 9999999 6999999999985432 22467899999999999999999999999999999999999
Q ss_pred EEEeEEEEcCC-C---CCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCc
Q 041993 180 KLKGVKVLASG-N---SPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAG 255 (391)
Q Consensus 180 ~i~n~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~ 255 (391)
+|++++|.++. + ++++|||++++|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|.+ ..+.
T Consensus 139 ~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~ 216 (339)
T 1ia5_A 139 TLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNT 216 (339)
T ss_dssp EEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCE
T ss_pred EEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCC
Confidence 99999999874 2 689999999999999999999999999999999 6999999999999999999998766 4578
Q ss_pred EEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCc-cEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEE
Q 041993 256 VQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQN-PIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVH 334 (391)
Q Consensus 256 i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~ 334 (391)
++||+|+|++|.++.+|++||++.+ +.|.++||+|+|++|+++.. ||.|++.|.. .. ..+...+.|+||+|+||+
T Consensus 217 v~nV~v~n~~~~~t~~girIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~~--~~p~~~~~i~ni~~~ni~ 292 (339)
T 1ia5_A 217 VKNVTFVDSTIINSDNGVRIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-TS--STPTTGVPITDFVLDNVH 292 (339)
T ss_dssp EEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEETC-TT--SCCCSSSCEEEEEEEEEE
T ss_pred EEEEEEEeeEEECCCcEEEEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCCC-CC--CCCcCCceEEEEEEEeEE
Confidence 9999999999999999999999977 78999999999999999886 9999999843 22 122345689999999999
Q ss_pred EeeCC-cceEEEecCCCCceecEEEEeeEEEecCCCccceeecccc
Q 041993 335 GTSAT-EVAVNFDCSSKYPCSRIRLEDVKLTYKNQPAAASCSHADG 379 (391)
Q Consensus 335 ~~~~~-~~~~~i~~~~~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g 379 (391)
++... ..++.+.|+ ..||+||+|+||+++. ++....|.|++.
T Consensus 293 gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 335 (339)
T 1ia5_A 293 GSVVSSGTNILISCG-SGSCSDWTWTDVSVSG--GKTSSKCTNVPS 335 (339)
T ss_dssp EEECTTSEEEEEECC-TTCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EEeCCCCEEEEEEeC-CCCEecEEEEeEEEEC--CCCCeeeECCCC
Confidence 99876 568999995 8899999999999995 345678999885
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=5.2e-54 Score=412.07 Aligned_cols=310 Identities=22% Similarity=0.341 Sum_probs=266.2
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeeeEEec-
Q 041993 43 TKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGVTLNS- 121 (391)
Q Consensus 43 t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I~G- 121 (391)
++|||+ + ++|++.++++|+||+|+|+ .+.|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+|.|
T Consensus 8 ~~aiq~-i-~aC~~~gg~~v~vP~G~~l--~l~l~----~-~~~l~~~g~~~~--~~~~w~--~~~i~~~-~~ni~I~G~ 73 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVTLNGFTVPAGNTL--VLNPD----K-GATVTMAGDITF--AKTTLD--GPLFTID-GTGINFVGA 73 (335)
T ss_dssp TTGGGG-C-TTCSEEEECCEEECTTCCE--EECCC----T-TCEEEECSCEEE--CCCCSC--SCSEEEE-EEEEEEECT
T ss_pred HHHhHH-H-HhcccCCCCEEEECCCEEE--EEEeC----C-CeEEEEeccEec--cccccc--CcEEEEE-ccCEEEEeC
Confidence 689999 7 5688878899999999997 34555 7 999999998876 346676 4689987 59999999
Q ss_pred -eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEeceee-EEEEeEEEEcCCC-----CCC
Q 041993 122 -GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNGCNN-VKLKGVKVLASGN-----SPN 194 (391)
Q Consensus 122 -G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~n-v~i~n~~i~~~~~-----~~~ 194 (391)
|+|||+|+.||+.... .....||++|.+.+|+ ++|++++++|+|.|++++..|+| ++|+|++|.++.+ +++
T Consensus 74 ~G~idG~G~~ww~~~~~-~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~N 151 (335)
T 1k5c_A 74 DHIFDGNGALYWDGKGT-NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHN 151 (335)
T ss_dssp TCEEECCGGGTCCSCTT-TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCS
T ss_pred ccEEcCChhHhhhcccc-cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCC
Confidence 8999999999985433 2246799999999999 99999999999999999999999 9999999999743 789
Q ss_pred CCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEE
Q 041993 195 TDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLR 274 (391)
Q Consensus 195 ~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~ 274 (391)
+||||+ +|+||+|+||+++++||||++++ .+||+|+||+|..+||++|||++. .+.++||+|+||+|.++..|++
T Consensus 152 tDGidi-~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gir 226 (335)
T 1k5c_A 152 TDGFDV-SANNVTIQNCIVKNQDDCIAIND-GNNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVR 226 (335)
T ss_dssp CCSEEE-ECSSEEEESCEEESSSCSEEEEE-EEEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEE
T ss_pred CCeEcc-cCCeEEEEeeEEEcCCCEEEeeC-CeeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEE
Confidence 999999 99999999999999999999999 599999999999999999999953 4689999999999999999999
Q ss_pred EEEecCCCC-eeEEEEEEEEEEEecCC-ccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEE--EeeCC-cceEEEecCC
Q 041993 275 IKSWGRPSN-GFARNILFRNAIMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVH--GTSAT-EVAVNFDCSS 349 (391)
Q Consensus 275 i~~~~~~~~-g~i~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~--~~~~~-~~~~~i~~~~ 349 (391)
||++.+ ++ |.++||+|+|++|+++. +||.|++.|.. .. ..+.....|+||+|+||+ ++... ..++.+.|++
T Consensus 227 IKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~~--~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~ 302 (335)
T 1k5c_A 227 IKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYPD-DV--GNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN 302 (335)
T ss_dssp EEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-SS--SSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS
T ss_pred EEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCCC-CC--CCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC
Confidence 999987 66 99999999999999987 69999999842 11 112245689999999999 77665 5689999975
Q ss_pred CCceecEEEEeeEEEecCCCccceeeccccc
Q 041993 350 KYPCSRIRLEDVKLTYKNQPAAASCSHADGS 380 (391)
Q Consensus 350 ~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g~ 380 (391)
||+||+|+||+++..+ ...+.|.++...
T Consensus 303 --~c~ni~~~nv~i~~~~-~~~~~~~~~~~~ 330 (335)
T 1k5c_A 303 --CSGNWNWSQLTVTGGK-AGTIKSDKAKIT 330 (335)
T ss_dssp --EESEEEEEEEEEESSB-CCCEECTTCEEE
T ss_pred --cCCCEEEEeEEEEcCC-CCceEeEEeEee
Confidence 9999999999999754 334566655543
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=8.1e-47 Score=376.94 Aligned_cols=294 Identities=17% Similarity=0.175 Sum_probs=246.2
Q ss_pred CCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCC-eEEE------------eeeeeeCCccCccEEEE
Q 041993 22 AAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPG-RFFL------------RNVAFQGPCKNNRITIR 88 (391)
Q Consensus 22 ~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G-~Y~~------------~~~~l~~~~~s~~~~l~ 88 (391)
...+++||+||||++| ||+|||+||+ +|++.++++|+||+| +|++ +++.|+ | +++|+
T Consensus 47 ~~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----S-nVtL~ 116 (600)
T 2x6w_A 47 HCDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----S-NVNLN 116 (600)
T ss_dssp CBCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----T-TEEEE
T ss_pred CCCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEc----C-ceEEe
Confidence 4467899999999998 9999999996 477778999999999 9999 888887 7 99999
Q ss_pred EccEEEeccCccccCCC-------CceEEEEeeeeeEEec-eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEe
Q 041993 89 IDGTLVAPSDYRVIGNA-------GNWLFFQHVDGVTLNS-GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAING 160 (391)
Q Consensus 89 ~~G~l~~~~~~~~~~~~-------~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~ 160 (391)
++|+|+++.++..|+.. .++|.+.+++||+|.| |+|||+|+.||+... ....+|. +.+.+|+ |+|
T Consensus 117 LdGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~---~~~~RP~-l~f~~c~---I~G 189 (600)
T 2x6w_A 117 IEGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ---LRNGVAF-GRSYNCS---VTG 189 (600)
T ss_dssp ECSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC---CEEEEEC-CSEEEEE---EES
T ss_pred eecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc---cCCCCCE-EEEeeeE---EeC
Confidence 99999999998888641 2347788899999999 999999999996321 1113677 7888888 999
Q ss_pred EEEecC-CceeEEE---eceeeEEEEeEE----EEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEe-CCCce-eEE
Q 041993 161 LTSLNS-QMYHVVF---NGCNNVKLKGVK----VLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSI-GPGTS-NLW 230 (391)
Q Consensus 161 v~i~n~-~~~~i~~---~~~~nv~i~n~~----i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i-~~~~~-nv~ 230 (391)
++++|+ |.|++++ ..|+|++|+|++ |.+ ++|+||| |+|+||+|.++||||++ |++++ ++.
T Consensus 190 ITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~ 259 (600)
T 2x6w_A 190 ITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIA 259 (600)
T ss_dssp CEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHE
T ss_pred eEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeE
Confidence 999999 9999999 999999999999 776 6899999 99999999999999999 99863 467
Q ss_pred EEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeee
Q 041993 231 IENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNY 309 (391)
Q Consensus 231 i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~ 309 (391)
++ .+..+| |++|||+ ..+.++||+|+| +||++.+ ++|.++||+|+|++|+++..++.+.+..
T Consensus 260 ~e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~~ 322 (600)
T 2x6w_A 260 CS--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSDV 322 (600)
T ss_dssp EE--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEECB
T ss_pred EE--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCCC
Confidence 77 566776 8999997 456799999999 4555555 7799999999999999999888887641
Q ss_pred CCCCCCCCCCCcceEEEeEEEEeEEEeeCCc------ceEEEecCC-------CCceecEEEEeeEEEecC
Q 041993 310 CPDNIGCPGQVSGVKISDVTYQDVHGTSATE------VAVNFDCSS-------KYPCSRIRLEDVKLTYKN 367 (391)
Q Consensus 310 ~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~------~~~~i~~~~-------~~~~~~v~~~nv~v~~~~ 367 (391)
...+.+.|+||+|+||+++.... .+..+.+.+ +.++++|+|+|+++..++
T Consensus 323 --------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 --------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp --------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred --------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 12345689999999999987643 236676655 358999999999998765
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1.7e-40 Score=336.30 Aligned_cols=300 Identities=15% Similarity=0.193 Sum_probs=236.1
Q ss_pred cCCccCCCCcccHHHHHHHHHHHcCC-------------------------CCCcEEEEcCCeEEE---eeeeeeCCccC
Q 041993 31 SFGAKPDGRTDSTKAFLSAWANACGS-------------------------PRAATIYVPPGRFFL---RNVAFQGPCKN 82 (391)
Q Consensus 31 d~Ga~~dg~~d~t~aiq~Ai~~a~~~-------------------------~~g~~v~ip~G~Y~~---~~~~l~~~~~s 82 (391)
.|||++||.+|.+.+|. +++++|.+ .++++|+||+|+|++ +++.|+ |
T Consensus 147 ~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~----s 221 (549)
T 1x0c_A 147 LISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS----S 221 (549)
T ss_dssp EEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC----T
T ss_pred cccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec----C
Confidence 58999999999998888 66554433 468899999999997 579998 7
Q ss_pred ccEE-EEEc-c-EEEeccCccccCCCCceEEEEeeeeeEEec-eeEeCCCccccccccCC--CCCCCCCeeEEE------
Q 041993 83 NRIT-IRID-G-TLVAPSDYRVIGNAGNWLFFQHVDGVTLNS-GILDGQGTALWACKNSG--KNCPSGATSMGF------ 150 (391)
Q Consensus 83 ~~~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~--~~~~~~~~~i~~------ 150 (391)
+++ |+++ | +|+. ++....+++|++|.| |+|||+|+.||...... .....+|+.+.+
T Consensus 222 -~~~~L~l~~GA~L~g-----------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~ 289 (549)
T 1x0c_A 222 -SVTWVYFAPGAYVKG-----------AVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLG 289 (549)
T ss_dssp -TCCEEEECTTEEEES-----------CEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECC
T ss_pred -CCCeEecCCCCEEEE-----------EEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeecccc
Confidence 999 9998 5 5542 233333799999999 99999999999532110 011236777777
Q ss_pred EeecceEEEeEEEecCCceeEEEec-e-ee--EEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCc
Q 041993 151 SNCNNIAINGLTSLNSQMYHVVFNG-C-NN--VKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGT 226 (391)
Q Consensus 151 ~~~~nv~i~~v~i~n~~~~~i~~~~-~-~n--v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~ 226 (391)
.+|+|++|+|++++|+|.|++++.. | ++ ++|+|+++.++. .+++|||++. +||+|+||+|+++||||++++
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks-- 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYY-- 364 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCS--
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEECC--
Confidence 9999999999999999999999664 5 69 999999998854 3689999998 999999999999999999998
Q ss_pred eeEEEEeeEEcC--Cce-EEEeecCCCCCCCcEEEEEEEeeEEeCCce------EEEEEEe--c--C------CCCeeEE
Q 041993 227 SNLWIENVACGP--GHG-ISIGSLGKDLNEAGVQNVTVKTVTFTGTQN------GLRIKSW--G--R------PSNGFAR 287 (391)
Q Consensus 227 ~nv~i~n~~~~~--~~g-i~igs~g~~~~~~~i~nI~i~n~~~~~~~~------gi~i~~~--~--~------~~~g~i~ 287 (391)
+||+|+||+|+. +++ |++||. .+.++||+|+||+|.++.. +..|+.. . + ...+.++
T Consensus 365 ~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~ 439 (549)
T 1x0c_A 365 SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNS 439 (549)
T ss_dssp SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEE
T ss_pred CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEc
Confidence 999999999975 456 999984 4689999999999998763 4447761 1 1 1267899
Q ss_pred EEEEEEEEEecCC-ccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCC-----cceEEEecCCC------Cceec
Q 041993 288 NILFRNAIMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSAT-----EVAVNFDCSSK------YPCSR 355 (391)
Q Consensus 288 nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-----~~~~~i~~~~~------~~~~~ 355 (391)
||+|+||+|+++. +++.+...+. .+...++||+|+||++.... ..+..+.|.+. .+|+|
T Consensus 440 nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~n 510 (549)
T 1x0c_A 440 NMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTD 510 (549)
T ss_dssp EEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEE
T ss_pred cEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeee
Confidence 9999999999987 6655543321 12347999999999987765 33556665433 68999
Q ss_pred EEEEeeEEEec
Q 041993 356 IRLEDVKLTYK 366 (391)
Q Consensus 356 v~~~nv~v~~~ 366 (391)
|+|+||++...
T Consensus 511 I~f~NV~i~G~ 521 (549)
T 1x0c_A 511 FSIEGFTVGNT 521 (549)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEeEEEeCe
Confidence 99999999744
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=1.7e-37 Score=311.43 Aligned_cols=306 Identities=19% Similarity=0.202 Sum_probs=225.0
Q ss_pred CCCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEE-eeeeeeCCccCccEEEEEcc----EEEe
Q 041993 21 LAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFL-RNVAFQGPCKNNRITIRIDG----TLVA 95 (391)
Q Consensus 21 ~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~~~G----~l~~ 95 (391)
.+.++.++|+||||++||.+|||+|||+||++ |++|+||+|+|++ +++.|+ + +++|.+++ +|+.
T Consensus 17 ~~~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~GtYlis~~l~l~----s-nv~L~g~g~~~t~L~~ 85 (609)
T 3gq8_A 17 ELKQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRF 85 (609)
T ss_dssp HHCSSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSEEEEESSCEEEC----S-SEEEEESCTTTEEEEE
T ss_pred hcCCcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCccEEEeCceEEC----C-CcEEEEeeCCCCEEEe
Confidence 34567899999999999999999999999963 3899999999999 889997 7 99999985 7777
Q ss_pred ccCccccCCC-CceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEe
Q 041993 96 PSDYRVIGNA-GNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFN 174 (391)
Q Consensus 96 ~~~~~~~~~~-~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~ 174 (391)
+++.+.+... .+++.+.+++||+|+|++|||+++.||... . ..+..+|++|.+.+|+|++|++++++|+|.+++.+.
T Consensus 86 ~~~~p~~~~li~~lI~a~~~~NItItG~TIDGNG~~~g~~~-~-~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~ 163 (609)
T 3gq8_A 86 MDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGI-S-GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDIT 163 (609)
T ss_dssp CTTCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSC-C-CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEE
T ss_pred CCCCCCCCceeeeeeeecccccEEEEeeEEECCccccCccc-c-cCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEe
Confidence 6554443211 123456789999999999999998444321 1 234578999999999999999999999998766544
Q ss_pred ceeeEEEEeEEEEcCCCCCCCCceeee-ccccEEEEeeEEe-cCCceEEeCCCceeEEEEeeEEcC------CceEEEee
Q 041993 175 GCNNVKLKGVKVLASGNSPNTDGIHVQ-LSSDVTILNTRIS-TGDDCVSIGPGTSNLWIENVACGP------GHGISIGS 246 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~~~~DGi~~~-~s~nv~I~n~~i~-~~dD~i~i~~~~~nv~i~n~~~~~------~~gi~igs 246 (391)
.+.+ | |+.+.||+.+. .|+||+|+||+|+ ++||||++++ ++||+|+||+|.+ ++|++||+
T Consensus 164 ~~~~----N-------DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GIsIGs 231 (609)
T 3gq8_A 164 CGGL----D-------YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEIDD 231 (609)
T ss_dssp CSSS----S-------CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSEEECT
T ss_pred CCCC----C-------ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccEEccC
Confidence 4322 1 22333443222 2999999999995 5999999988 9999999999953 36899974
Q ss_pred cCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEE-EEecCC-ccEEEEeeeCCCCCCCCCCCcceE
Q 041993 247 LGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNA-IMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVK 324 (391)
Q Consensus 247 ~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~ 324 (391)
. .+||+|+||++.++..|++||++. +++.++||.+.|. .+++.. +.++.-..+.. ..+...+
T Consensus 232 g--------s~NVtV~Nc~i~nt~~GIrIKt~~--~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a------~dp~s~~ 295 (609)
T 3gq8_A 232 G--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAPQSVS 295 (609)
T ss_dssp T--------CEEEEEESEEEESSSEEEEEEECT--TSCCCEEEEEEEEEEESCSEEEEEEETTSCST------TSCCCSS
T ss_pred C--------cccEEEEeeEEECCCCEEEEEecC--CCCccccEEEECCEeecCceEecceEEccccC------CCCCcce
Confidence 3 299999999999999999999874 4678999999995 555543 34443333221 1122335
Q ss_pred EEeEEEEeEEEeeCCcc----------eEEEe-------------cCCC-----------CceecEEEEeeEEEecC
Q 041993 325 ISDVTYQDVHGTSATEV----------AVNFD-------------CSSK-----------YPCSRIRLEDVKLTYKN 367 (391)
Q Consensus 325 i~nI~~~ni~~~~~~~~----------~~~i~-------------~~~~-----------~~~~~v~~~nv~v~~~~ 367 (391)
.+||+++|+........ ++.+. +.|. +++++++|.+|.++.-+
T Consensus 296 a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q~~~~~~~l~~~~i~gf~ 372 (609)
T 3gq8_A 296 AKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFS 372 (609)
T ss_dssp CEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCT
T ss_pred ecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCceEEEEEecceeEEcceEEeccc
Confidence 68888888776555311 22221 2222 35799999999999654
No 14
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=6.5e-38 Score=317.10 Aligned_cols=267 Identities=13% Similarity=0.152 Sum_probs=214.5
Q ss_pred CCCcEEEEcCCeEEE-------------eeeeeeCCccCccEE-EEEc-c-EEEeccCccccCCCCceEEEEeeeeeEEe
Q 041993 57 PRAATIYVPPGRFFL-------------RNVAFQGPCKNNRIT-IRID-G-TLVAPSDYRVIGNAGNWLFFQHVDGVTLN 120 (391)
Q Consensus 57 ~~g~~v~ip~G~Y~~-------------~~~~l~~~~~s~~~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~ni~I~ 120 (391)
.++++|+||+|+|++ +++.|+ | +++ |+++ | +|+. .+.+.+++|++|+
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lk----S-nvt~L~L~~GA~l~g------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLN----S-NTYWVYLAPGAYVKG------------AIEYFTKQNFYAT 291 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECC----T-TCCEEEECTTEEEES------------CEEECCSSCEEEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEec----C-CCceEEecCCcEEEc------------cEEEeCceeEEEE
Confidence 478899999999999 468887 7 998 9998 6 4442 3778889999999
Q ss_pred c-eeEeCCCccccccccCC-CCCCCCCeeEEEE------eecceEEEeEEEecCCceeEEEeceeeE--EEEeEEEEcCC
Q 041993 121 S-GILDGQGTALWACKNSG-KNCPSGATSMGFS------NCNNIAINGLTSLNSQMYHVVFNGCNNV--KLKGVKVLASG 190 (391)
Q Consensus 121 G-G~idg~g~~~w~~~~~~-~~~~~~~~~i~~~------~~~nv~i~~v~i~n~~~~~i~~~~~~nv--~i~n~~i~~~~ 190 (391)
| |+|||+|+.||...... .....+|..+.+. +|+|++|+|++++|+|.|++++..|+|+ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9 99999999999642211 1223477788877 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCC--ce-EEEeecCCCCCCCcEEEEEEEeeEEe
Q 041993 191 NSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPG--HG-ISIGSLGKDLNEAGVQNVTVKTVTFT 267 (391)
Q Consensus 191 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~--~g-i~igs~g~~~~~~~i~nI~i~n~~~~ 267 (391)
..++||||+. +||+|+||+|.++||||++++ +||+|+||+++.+ ++ +++||. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 3469999998 999999999999999999997 9999999998864 56 999984 468999999999998
Q ss_pred CCce--------EEEEEEec--------CCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEE
Q 041993 268 GTQN--------GLRIKSWG--------RPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQ 331 (391)
Q Consensus 268 ~~~~--------gi~i~~~~--------~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ 331 (391)
++.. +..+.+.. ..+.+ + ||+|+|++++++..++ +.. . +...++||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i--~----------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRI--T----------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEE--C----------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEE--C----------CCCCEEEEEEE
Confidence 8653 23322210 00233 8 9999999999998885 332 1 13479999999
Q ss_pred eEEEee------CCcceEEEecCCCCceecEEEEeeEEEec
Q 041993 332 DVHGTS------ATEVAVNFDCSSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 332 ni~~~~------~~~~~~~i~~~~~~~~~~v~~~nv~v~~~ 366 (391)
||++.+ ....+..+.|.+ .+|+||+|+||++...
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 999776 223355677776 8999999999999644
No 15
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=4.5e-37 Score=312.65 Aligned_cols=306 Identities=18% Similarity=0.202 Sum_probs=222.8
Q ss_pred CCCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEE-eeeeeeCCccCccEEEEEcc----EEEe
Q 041993 21 LAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFL-RNVAFQGPCKNNRITIRIDG----TLVA 95 (391)
Q Consensus 21 ~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~~~G----~l~~ 95 (391)
...++.++|+||||++||.+|||+|||+||++ |++|+||+|+|++ +++.|+ + +++|.+++ +|++
T Consensus 17 ~~~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaGtYlisg~I~L~----s-nv~L~Geg~~~t~Lk~ 85 (772)
T 3gqn_A 17 ELKQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRF 85 (772)
T ss_dssp HHCSSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSEEEEESSCEEEC----S-SCEEEEEEEEEEEEEE
T ss_pred hcCCcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCccEEEEeEEEEC----C-CcEEEEecCCCCEEEe
Confidence 34567899999999999999999999999963 3899999999999 899998 7 99999985 6676
Q ss_pred ccCccccCCC-CceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEe
Q 041993 96 PSDYRVIGNA-GNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFN 174 (391)
Q Consensus 96 ~~~~~~~~~~-~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~ 174 (391)
+++.+.+... .+++.+.+++||+|+|++|||+++.||.... ..+..+|.+|.+.+|+|++|++++++|+|.+++.+.
T Consensus 86 ~~d~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~--~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~ 163 (772)
T 3gqn_A 86 MDSVGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS--GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDIT 163 (772)
T ss_dssp CTTCCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC--CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEE
T ss_pred CCCCCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccc--cCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEe
Confidence 6554433211 1344567899999999999999984443111 234578999999999999999999999998655544
Q ss_pred ceeeEEEEeEEEEcCCCCCCCCceeee-ccccEEEEeeEEec-CCceEEeCCCceeEEEEeeEEcC------CceEEEee
Q 041993 175 GCNNVKLKGVKVLASGNSPNTDGIHVQ-LSSDVTILNTRIST-GDDCVSIGPGTSNLWIENVACGP------GHGISIGS 246 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~~~~DGi~~~-~s~nv~I~n~~i~~-~dD~i~i~~~~~nv~i~n~~~~~------~~gi~igs 246 (391)
...+ | |+.+.||+.+. .|+||+|+||+|++ +||||++++ ++||+|+||+|.+ ++|++||+
T Consensus 164 np~~----N-------DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GIsIGs 231 (772)
T 3gqn_A 164 CGGL----D-------YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEIDD 231 (772)
T ss_dssp CSSS----S-------CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSEEECT
T ss_pred CCCc----C-------CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccEEecC
Confidence 3322 1 22333442222 29999999999955 999999988 9999999999943 46899975
Q ss_pred cCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEE-EEEecCC-ccEEEEeeeCCCCCCCCCCCcceE
Q 041993 247 LGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRN-AIMKNVQ-NPIIIDQNYCPDNIGCPGQVSGVK 324 (391)
Q Consensus 247 ~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~ 324 (391)
. .+||+|+||++.++..|++||++. +++.++||.+.| +.+++.. +.+.....+.. ..+...+
T Consensus 232 g--------s~NVtV~Nc~~~nT~nGIRIKt~~--~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~dp~s~~ 295 (772)
T 3gqn_A 232 G--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAPQSVS 295 (772)
T ss_dssp T--------CEEEEEEEEEEESSSEEEEECCCT--TSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------SSCCCSS
T ss_pred C--------cccEEEEceEEECCCcEEEEEEeC--CCCccccEEEECCEEeccCeEecceEEccccC------CCCCCcc
Confidence 3 299999999999999999999774 577899999985 7776643 23332222110 1122235
Q ss_pred EEeEEEEeEEEeeCCcc----------eEEEe-------------cCCC-----------CceecEEEEeeEEEecC
Q 041993 325 ISDVTYQDVHGTSATEV----------AVNFD-------------CSSK-----------YPCSRIRLEDVKLTYKN 367 (391)
Q Consensus 325 i~nI~~~ni~~~~~~~~----------~~~i~-------------~~~~-----------~~~~~v~~~nv~v~~~~ 367 (391)
..||.++|+........ ++.+. +.+. +++++++|.+|+++.-.
T Consensus 296 a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q~~~~~~~ln~i~i~gf~ 372 (772)
T 3gqn_A 296 AKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFS 372 (772)
T ss_dssp CEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCT
T ss_pred CccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCceEEEEEecceeEEcceEEeccc
Confidence 67888887775544311 22221 2222 35799999999999654
No 16
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=5.3e-36 Score=296.72 Aligned_cols=297 Identities=12% Similarity=0.182 Sum_probs=220.2
Q ss_pred CCCCeEE-eecCCccCCCCcccHHHHHHHHHHHcCCC-CCcEEEEcCCeEEEeeeeeeCCccCccEEEEEc--cEEEecc
Q 041993 22 AAPPSYN-VVSFGAKPDGRTDSTKAFLSAWANACGSP-RAATIYVPPGRFFLRNVAFQGPCKNNRITIRID--GTLVAPS 97 (391)
Q Consensus 22 ~~~~~~~-v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~-~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~~ 97 (391)
...++++ |++|||++||.+|||+|||+||++ |++. ++++|+||+|+|+++++.|+ | +++|+++ ++|+++.
T Consensus 17 ~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~~ggg~V~vP~GtYl~g~I~lk----s-~v~L~l~~GatL~~s~ 90 (464)
T 1h80_A 17 QQDVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRKPNGGTLLIPNGTYHFLGIQMK----S-NVHIRVESDVIIKPTW 90 (464)
T ss_dssp CCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTSTTCEEEEECSSEEEECSEECC----T-TEEEEECTTCEEEECC
T ss_pred CCcceeeehhccCcCCCCCchhHHHHHHHHHH-HhhccCCcEEEECCCeEEEeeEecc----C-ceEEEEcCCcEEEecc
Confidence 4456788 999999999999999999999965 5555 78999999999999999997 7 9999998 4888876
Q ss_pred C--ccccCCCCceEEE---EeeeeeEEec-e---eEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc
Q 041993 98 D--YRVIGNAGNWLFF---QHVDGVTLNS-G---ILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM 168 (391)
Q Consensus 98 ~--~~~~~~~~~~i~~---~~~~ni~I~G-G---~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~ 168 (391)
+ ...|+ ++.+ .+++|++|+| | +|||+|+. ..+|.++.+.+|+|++|++++++|.
T Consensus 91 ~td~~~y~----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-----------~~rp~~i~~~~~~Nv~I~gIti~n~-- 153 (464)
T 1h80_A 91 NGDGKNHR----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-----------DKNLAVFKLGDVRNYKISNFTIDDN-- 153 (464)
T ss_dssp CTTCSCEE----EEEESSSSCEEEEEEEECTTCEEEECTTCS-----------CCBEEEEEECSEEEEEEEEEEEECC--
T ss_pred CCCcccCC----ceEeecccCccceEEECcCcceEEeCCCCC-----------CCCceEEEEEeeccEEEeeeEEecc--
Confidence 3 44442 3333 6799999999 8 88888752 3478899999999999999999994
Q ss_pred eeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEE--eCCCceeEEEEeeEEcCCceEEEee
Q 041993 169 YHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVS--IGPGTSNLWIENVACGPGHGISIGS 246 (391)
Q Consensus 169 ~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~--i~~~~~nv~i~n~~~~~~~gi~igs 246 (391)
|.+ ..+.++.+ .++||+++ .|+||+|+||+|.++||++. ...+++||+|+||+|.+++|++|++
T Consensus 154 w~i--h~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIkt 219 (464)
T 1h80_A 154 KTI--FASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMET 219 (464)
T ss_dssp SCB--SCSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEEC
T ss_pred ceE--eeceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEe
Confidence 443 23333322 15799998 78999999999999998775 2334899999999999988898865
Q ss_pred cC----CCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcc
Q 041993 247 LG----KDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSG 322 (391)
Q Consensus 247 ~g----~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~ 322 (391)
.+ .. ..+.++||+|+||+|.+...++.|++. ...++||+|+||++++...++.+.+.|.+.-. + ..
T Consensus 220 g~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd--~---~~ 289 (464)
T 1h80_A 220 DNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS--P---TD 289 (464)
T ss_dssp CCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEECC--------
T ss_pred CCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccccC--c---cc
Confidence 41 11 245799999999999999999999943 34789999999999999999999987764211 1 11
Q ss_pred eEEEeEEEEeEE------Eee---------CCcceEEEecC-------------CCCceecEEEEeeEEEe
Q 041993 323 VKISDVTYQDVH------GTS---------ATEVAVNFDCS-------------SKYPCSRIRLEDVKLTY 365 (391)
Q Consensus 323 ~~i~nI~~~ni~------~~~---------~~~~~~~i~~~-------------~~~~~~~v~~~nv~v~~ 365 (391)
....+.+|+|.. +.. ....+++|.|. +....++++++||++..
T Consensus 290 ~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 290 EVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred cccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 246666666554 221 11235666654 45567889999999866
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=7.3e-29 Score=242.76 Aligned_cols=302 Identities=16% Similarity=0.205 Sum_probs=180.5
Q ss_pred eEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEe--------eeeeeCCccCccEEEEEcc----EE
Q 041993 26 SYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLR--------NVAFQGPCKNNRITIRIDG----TL 93 (391)
Q Consensus 26 ~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~--------~~~l~~~~~s~~~~l~~~G----~l 93 (391)
.++|+||||++||.+|||+|||+||++|++ .++++|+||+|+|++. ++.++ + +++|+++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-~gg~~v~~p~G~y~~~~~~~~~~g~l~~~----~-~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-AGGGTVYLPAGEYRVSAAGEPGDGCLMLK----D-GVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-TTSEEEEECSEEEEECCCSSGGGCSEECC----T-TEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-cCCCEEEECCeEEEEcccccCCcccEEec----C-CeEEEEcCCCCcEE
Confidence 689999999999999999999999987654 4689999999999984 67776 7 99999985 45
Q ss_pred EeccCccccCC------CCceEEEEeeeeeEEec------eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeE
Q 041993 94 VAPSDYRVIGN------AGNWLFFQHVDGVTLNS------GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGL 161 (391)
Q Consensus 94 ~~~~~~~~~~~------~~~~i~~~~~~ni~I~G------G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v 161 (391)
++..+...++. .+.-....+++|++|.| |+++| ||.....+ .+..|++++|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~~~nv~I~~~ 141 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGADRDVTIERV 141 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCCEEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCcc----------ccccccceEEEeE
Confidence 55544333221 01111334688889988 46665 88643211 1247999999999
Q ss_pred EEecCCceeEEEecee-eEEEEeEEEEcCCCCCCCCceeeeccccEEEEee-EEecCCceEEeCCCceeEEEEeeEEcCC
Q 041993 162 TSLNSQMYHVVFNGCN-NVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNT-RISTGDDCVSIGPGTSNLWIENVACGPG 239 (391)
Q Consensus 162 ~i~n~~~~~i~~~~~~-nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~-~i~~~dD~i~i~~~~~nv~i~n~~~~~~ 239 (391)
++++++.|++++..|. +++++|+.+.. ...|||.++.|++++|++| .+...+|+|.+..++++++|+|+.+...
T Consensus 142 ~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~ 217 (377)
T 2pyg_A 142 EVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGN 217 (377)
T ss_dssp EEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESC
T ss_pred EEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECc
Confidence 9999999999998865 78888887754 2335555555555555555 2333455555444445555555555432
Q ss_pred -ceEEEeecCCCCCCC-----------------------cEEEEEEEeeEEeCC-ceEEEEEEecCCCCeeEEEEEEEEE
Q 041993 240 -HGISIGSLGKDLNEA-----------------------GVQNVTVKTVTFTGT-QNGLRIKSWGRPSNGFARNILFRNA 294 (391)
Q Consensus 240 -~gi~igs~g~~~~~~-----------------------~i~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~nI~~~ni 294 (391)
.++.+...+.. ... .+++++|+|+++.++ ..|++++. .++++|+|.
T Consensus 218 ~~g~~~~~~g~~-~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g--------~~~~~i~~N 288 (377)
T 2pyg_A 218 GSSGLVVQRGLE-DLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYG--------AQDVQILDN 288 (377)
T ss_dssp SSCSEEEECCSS-CCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEE--------EEEEEEESC
T ss_pred cCceEEEecccc-CCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceEEEec--------CCCcEEECc
Confidence 23222111000 011 245566666666655 45665551 456666666
Q ss_pred EEecCCc----cEEEEeeeCCCCCCCCCCCcce--EEEeEEEEeEEEeeCCcceEEEecCCCCceecEEEEeeEEEec
Q 041993 295 IMKNVQN----PIIIDQNYCPDNIGCPGQVSGV--KISDVTYQDVHGTSATEVAVNFDCSSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 295 ~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~--~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~~~v~~~nv~v~~~ 366 (391)
++.+... +..+.+.|... +. .-.. .-+++++++.++.+....+..+.... ..+++++++|.++...
T Consensus 289 ~i~~n~~~~~~~~v~~~~~~~~----~~-~~~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~-~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 289 QIHDNAQAAAVPEVLLQSFDDT----AG-ASGTYYTTLNTRIEGNTISGSANSTYGIQERN-DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp EEESCCSSSSCCSEEEECEEET----TS-SSCEEECCBCCEEESCEEECCSSCCEEEEECS-SSCBCCEEESCEEESS
T ss_pred EEECCcccccccceEEEEecCC----Cc-cceeeeeccCeEEECCEEECcCCCccceEEcc-CCCccEEEECcEEeCC
Confidence 6665432 11111112210 00 0000 12567777777776665433333222 3456777777777643
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=6.6e-30 Score=242.80 Aligned_cols=210 Identities=16% Similarity=0.231 Sum_probs=162.5
Q ss_pred CCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCC----eEEEe-eeeeeCCccCccEEEEEcc--EEEec
Q 041993 24 PPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPG----RFFLR-NVAFQGPCKNNRITIRIDG--TLVAP 96 (391)
Q Consensus 24 ~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G----~Y~~~-~~~l~~~~~s~~~~l~~~G--~l~~~ 96 (391)
+..+||+||||++||.+|||+|||+||++||+..++++|+||+| +|+++ ++.|+ + +++|++++ .+.+.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~Lk----S-nV~L~Ge~~AtIl~s 123 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIP----G-GVNIRGVGKASQLRA 123 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEEC----T-TEEEECCSTTSEEEE
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEec----C-CeEEEEecCceEeec
Confidence 46899999999999999999999999998877668899999999 99985 68887 7 99999984 44332
Q ss_pred cCc--ccc--CCCCceEEEEeeeeeEEec-eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEE--ecCCce
Q 041993 97 SDY--RVI--GNAGNWLFFQHVDGVTLNS-GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTS--LNSQMY 169 (391)
Q Consensus 97 ~~~--~~~--~~~~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i--~n~~~~ 169 (391)
... ... +.-.+++.+.+++|+.|.| |+|||++..|+. .. +..|+ .....++++.+++++. .+++.|
T Consensus 124 ~~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~-e~----~~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg~W 196 (514)
T 2vbk_A 124 KSGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITA-ED----SVIRQ--VYGWVFDNVMVNEVETAYLMQGLW 196 (514)
T ss_dssp CTTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCT-TC----SSCCC--EESEEEESCEEEEEEEEEEEESEE
T ss_pred cccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccc-cc----eeeec--cceEEeeeEEEEeEEEeEeccCcE
Confidence 111 000 0012456677899999999 999998764422 11 11122 2333478999999965 478899
Q ss_pred eEEEeceeeEEEE-eEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCC-----------ceeEEEEeeEEc
Q 041993 170 HVVFNGCNNVKLK-GVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPG-----------TSNLWIENVACG 237 (391)
Q Consensus 170 ~i~~~~~~nv~i~-n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~-----------~~nv~i~n~~~~ 237 (391)
++++..|++++++ ++++. .+|+||+|.+|.|..||||+++|+| ++|+.
T Consensus 197 TIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~------- 256 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR------- 256 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC-------
T ss_pred EEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc-------
Confidence 9999999999988 55554 2699999999999999999999985 55555
Q ss_pred CCce-EEEeecCCCCCCCcEEE-EEEEeeEEeCCc
Q 041993 238 PGHG-ISIGSLGKDLNEAGVQN-VTVKTVTFTGTQ 270 (391)
Q Consensus 238 ~~~g-i~igs~g~~~~~~~i~n-I~i~n~~~~~~~ 270 (391)
|| +-+|||. ..++++| +++++|.+.+++
T Consensus 257 --hgav~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 --SEAIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp --CEEEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred --cccEEECchh---hcccccccEEEEeeeccCCc
Confidence 65 9999984 3568999 999999999874
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.93 E-value=1.9e-24 Score=214.15 Aligned_cols=229 Identities=11% Similarity=0.141 Sum_probs=180.0
Q ss_pred ceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecC--CceeEEEeceeeEEEEeE
Q 041993 107 NWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNS--QMYHVVFNGCNNVKLKGV 184 (391)
Q Consensus 107 ~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~--~~~~i~~~~~~nv~i~n~ 184 (391)
.++.+.+++|++|+|-++.-. +.| .+++.+|+|++|+++++.++ ...++++..|+||+|+|+
T Consensus 191 ~~i~~~~~~nv~i~giti~ns--p~~--------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~ 254 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINS--PMW--------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKC 254 (448)
T ss_dssp CSEEEESCEEEEEESCEEESC--SSC--------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESC
T ss_pred eEEEEEcccceEEEeeEEEeC--CCc--------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEee
Confidence 479999999999999555321 122 48899999999999999985 456899999999999999
Q ss_pred EEEcCCC------CCCCCceeeec-cccEEEEeeEEe--cCCceEEeCCC----ceeEEEEeeEEcCC-ceEEEeecCCC
Q 041993 185 KVLASGN------SPNTDGIHVQL-SSDVTILNTRIS--TGDDCVSIGPG----TSNLWIENVACGPG-HGISIGSLGKD 250 (391)
Q Consensus 185 ~i~~~~~------~~~~DGi~~~~-s~nv~I~n~~i~--~~dD~i~i~~~----~~nv~i~n~~~~~~-~gi~igs~g~~ 250 (391)
+|.+.+| +.+.||+++.. |+||+|+||+++ .+++|+++++. .+||+|+||++.+. +|++|++...+
T Consensus 255 ~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~ 334 (448)
T 3jur_A 255 RFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRR 334 (448)
T ss_dssp EEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTT
T ss_pred EEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCC
Confidence 9998654 22344554443 899999999994 45669999874 59999999999876 79999986433
Q ss_pred CCCCcEEEEEEEeeEEeCCceEE-EEEEecC----CCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEE
Q 041993 251 LNEAGVQNVTVKTVTFTGTQNGL-RIKSWGR----PSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKI 325 (391)
Q Consensus 251 ~~~~~i~nI~i~n~~~~~~~~gi-~i~~~~~----~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 325 (391)
.+.++||+|+|++|.+...++ .|...+. ...+.++||+|+|++.++...++.+... +..++
T Consensus 335 --gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~p~ 400 (448)
T 3jur_A 335 --GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------ENDYV 400 (448)
T ss_dssp --CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTBCE
T ss_pred --CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCCCE
Confidence 367999999999999998887 8876543 1346899999999999987788887642 22479
Q ss_pred EeEEEEeEEEeeCCcceEEEec----CCCCceecEEEEeeEEEec
Q 041993 326 SDVTYQDVHGTSATEVAVNFDC----SSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 326 ~nI~~~ni~~~~~~~~~~~i~~----~~~~~~~~v~~~nv~v~~~ 366 (391)
+||+|+||+++.... +..+.. .....++|++|+||++...
T Consensus 401 ~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 401 KDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp EEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcCE
Confidence 999999999998764 444542 2344689999999999853
No 20
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.90 E-value=1.5e-21 Score=201.03 Aligned_cols=247 Identities=13% Similarity=0.082 Sum_probs=196.7
Q ss_pred ceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEec--C-CceeEEEeceeeEEEEe
Q 041993 107 NWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLN--S-QMYHVVFNGCNNVKLKG 183 (391)
Q Consensus 107 ~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n--~-~~~~i~~~~~~nv~i~n 183 (391)
.++.+.+++|++|+|-++.... .| .+++.+|+|++|+++++.+ + ...++++..|+||+|+|
T Consensus 332 ~~i~~~~~~nv~I~giti~ns~--~~--------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n 395 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNPA--FH--------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFN 395 (608)
T ss_dssp CSEEEESEEEEEEESCEEECCS--SC--------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEES
T ss_pred eEEEEEeeeeEEEeCcEEecCC--CC--------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEe
Confidence 4799999999999995553221 22 5899999999999999865 2 24689999999999999
Q ss_pred EEEEcCCC------CCCCCceeeeccccEEEEeeEEecCCceEEeCCC----ceeEEEEeeEEcCC-ceEEEeecCCCCC
Q 041993 184 VKVLASGN------SPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPG----TSNLWIENVACGPG-HGISIGSLGKDLN 252 (391)
Q Consensus 184 ~~i~~~~~------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~----~~nv~i~n~~~~~~-~gi~igs~g~~~~ 252 (391)
++|.+.+| +++.||++...|+||+|+||++..+++++++++. .+||+|+||++.++ +|++|++...+
T Consensus 396 ~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~-- 473 (608)
T 2uvf_A 396 NFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTI-- 473 (608)
T ss_dssp CEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTT--
T ss_pred eEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCC--
Confidence 99998765 3456777766799999999999999988888763 59999999999986 69999986433
Q ss_pred CCcEEEEEEEeeEEeCC-ceEEEEEEecCC-----------CCeeEEEEEEEEEEEecCC---ccEEEEeeeCCCCCCCC
Q 041993 253 EAGVQNVTVKTVTFTGT-QNGLRIKSWGRP-----------SNGFARNILFRNAIMKNVQ---NPIIIDQNYCPDNIGCP 317 (391)
Q Consensus 253 ~~~i~nI~i~n~~~~~~-~~gi~i~~~~~~-----------~~g~i~nI~~~ni~~~~~~---~~i~i~~~~~~~~~~~~ 317 (391)
.+.++||+|+|++|.+. ..+|.|...+.. ..+.+++|+|+|+++++.. .++.+... +
T Consensus 474 gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~------- 545 (608)
T 2uvf_A 474 GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-T------- 545 (608)
T ss_dssp CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-G-------
T ss_pred CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-c-------
Confidence 35699999999999998 589999876542 2356999999999999875 36666642 1
Q ss_pred CCCcceEEEeEEEEeEEEeeCCcceEEEecCCCCceecEEEEeeEEEecCCCccceeecccccCcceecCC
Q 041993 318 GQVSGVKISDVTYQDVHGTSATEVAVNFDCSSKYPCSRIRLEDVKLTYKNQPAAASCSHADGSASGLVQPK 388 (391)
Q Consensus 318 ~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~~~~~~~~~v~~~nv~v~~~~~~~~~~c~~~~g~~~~~~~~~ 388 (391)
....+++||+|+||+++... +..+. .|++++|+||++...++...+.|.++.+..+.-+.|+
T Consensus 546 --~~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~ 607 (608)
T 2uvf_A 546 --ANKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVA 607 (608)
T ss_dssp --GGTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC-
T ss_pred --CCCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeC
Confidence 13347999999999999875 44454 5799999999999765555799999999887555554
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.89 E-value=1.4e-21 Score=199.21 Aligned_cols=265 Identities=18% Similarity=0.230 Sum_probs=190.9
Q ss_pred CCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCC---------cEEEEcCCeEEEe-eeeeeCCccCccEEEEEcc-
Q 041993 23 APPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRA---------ATIYVPPGRFFLR-NVAFQGPCKNNRITIRIDG- 91 (391)
Q Consensus 23 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g---------~~v~ip~G~Y~~~-~~~l~~~~~s~~~~l~~~G- 91 (391)
....+||+||||++||++|||+|||+||+++ ++.++ .+|+||+|+|++. +|.++ + ++.|.+++
T Consensus 46 y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~----~-~t~L~G~~~ 119 (758)
T 3eqn_A 46 YPVFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL----Y-QTQLIGDAK 119 (758)
T ss_dssp CCSEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECC----T-TEEEEECSS
T ss_pred CeEEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEcc----C-CeEEEecCC
Confidence 3447799999999999999999999999764 43332 6999999999986 68887 7 99999985
Q ss_pred ---EEEeccCccccCCCCceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc
Q 041993 92 ---TLVAPSDYRVIGNAGNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM 168 (391)
Q Consensus 92 ---~l~~~~~~~~~~~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~ 168 (391)
+|++.+. |.+. .+ |.+...+++|..||.... ..++.++|+.|+ ++..++..
T Consensus 120 ~~pvIka~~~---F~G~-~l----------i~~d~y~~~G~~w~~~~~-----------~F~r~irNlviD-~t~~~~~~ 173 (758)
T 3eqn_A 120 NLPTLLAAPN---FSGI-AL----------IDADPYLAGGAQYYVNQN-----------NFFRSVRNFVID-LRQVSGSA 173 (758)
T ss_dssp SCCEEEECTT---CCSS-CS----------EESSCBCGGGCBSSCGGG-----------CCCEEEEEEEEE-CTTCSSCE
T ss_pred CCCeEecCCC---CCCc-ce----------eeccccCCCCcccccccc-----------ceeeeecceEEe-ccccCCCc
Confidence 6666433 3221 11 223233456667775432 245578888888 66667778
Q ss_pred eeEEEeceeeEEEEeEEEEcCCCC-CCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCc-eEEEee
Q 041993 169 YHVVFNGCNNVKLKGVKVLASGNS-PNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGH-GISIGS 246 (391)
Q Consensus 169 ~~i~~~~~~nv~i~n~~i~~~~~~-~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs 246 (391)
.++++..++++.++|+.|..+... ...+||++...+...|+|++|..++=++.++ .+..+++|++|.++. +|.+-.
T Consensus 174 ~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~g--nQQfT~rnltF~~~~taI~~~w 251 (758)
T 3eqn_A 174 TGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFG--NQQFTVRNLTFNNANTAINAIW 251 (758)
T ss_dssp EEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEE--CSCCEEEEEEEESCSEEEEEEE
T ss_pred eEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcC--CcceEEeccEEeChHHHHhhhc
Confidence 899999999999999999997654 3488999998889999999999999888774 478888888888764 666633
Q ss_pred cCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCC--CCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceE
Q 041993 247 LGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRP--SNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVK 324 (391)
Q Consensus 247 ~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~--~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 324 (391)
. -.+++.++++.++.-||.+...... ....+--+.+.|.+++++..++... +.... ...+...
T Consensus 252 ~---------wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~--~~~~~----~~~~slv 316 (758)
T 3eqn_A 252 N---------WGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWS--GASSG----HLQGSLV 316 (758)
T ss_dssp B---------SCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEES--SCCCS----SCSSEEE
T ss_pred C---------ceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEec--cCCCC----CCcceEE
Confidence 2 1266777777777779888642110 1234667899999999987555443 22111 1124577
Q ss_pred EEeEEEEeEEEe
Q 041993 325 ISDVTYQDVHGT 336 (391)
Q Consensus 325 i~nI~~~ni~~~ 336 (391)
|+||.++|+...
T Consensus 317 leNv~~~nv~~~ 328 (758)
T 3eqn_A 317 LNNIQLTNVPVA 328 (758)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEeEEeeCCCeE
Confidence 899999887543
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.87 E-value=6.4e-20 Score=176.11 Aligned_cols=202 Identities=21% Similarity=0.285 Sum_probs=163.6
Q ss_pred eEEEEeecceEEEeE---EEecCC--ce-------------eEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEE
Q 041993 147 SMGFSNCNNIAINGL---TSLNSQ--MY-------------HVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTI 208 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v---~i~n~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 208 (391)
++.+ ..+|++|+|. +|.... .| .+.+..|+|++|+++++.+++. +++++..|+||+|
T Consensus 66 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISV-SGSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSVAGSDYLTL 140 (339)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEE-EcCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEEecccCeEE
Confidence 4555 4599999997 775432 12 4899999999999999999643 6799999999999
Q ss_pred EeeEEecC---------CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEe
Q 041993 209 LNTRISTG---------DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSW 278 (391)
Q Consensus 209 ~n~~i~~~---------dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~ 278 (391)
+++++.+. .|++.+.+ ++||+|+||++..+ +++++++. +||+|+||++.+. +|+.|.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999863 57788877 99999999999876 47999773 8999999999986 68999986
Q ss_pred cCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec-------CC--
Q 041993 279 GRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC-------SS-- 349 (391)
Q Consensus 279 ~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~-------~~-- 349 (391)
.....+.++||+|+|+++.+..++++|+++.. ..+.++||+|+||++......++.+.. .|
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 43345789999999999999999999997521 234899999999999987655777753 12
Q ss_pred CCceecEEEEeeEEEecC--CCcccee
Q 041993 350 KYPCSRIRLEDVKLTYKN--QPAAASC 374 (391)
Q Consensus 350 ~~~~~~v~~~nv~v~~~~--~~~~~~c 374 (391)
..+++||+|+||+.+... .+..+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 357999999999999875 3445666
No 23
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=5.6e-20 Score=177.74 Aligned_cols=202 Identities=17% Similarity=0.258 Sum_probs=162.0
Q ss_pred eEEEEeecceEEEe---EEEecCC--ce------------eEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEE
Q 041993 147 SMGFSNCNNIAING---LTSLNSQ--MY------------HVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTIL 209 (391)
Q Consensus 147 ~i~~~~~~nv~i~~---v~i~n~~--~~------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~ 209 (391)
.|.+ +.+|++|+| -+|.... .| .+.+..|+|++|+++++.+++. .++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe-eCCEEEE
Confidence 4555 569999999 5665332 23 4899999999999999999753 369999 9999999
Q ss_pred eeEEecC---------CceEEeCCCceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEec
Q 041993 210 NTRISTG---------DDCVSIGPGTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWG 279 (391)
Q Consensus 210 n~~i~~~---------dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~ 279 (391)
|++|.+. .|++.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999872 57888877 999999999999875 6999773 8999999999986 689999874
Q ss_pred CCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec---------CC-
Q 041993 280 RPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC---------SS- 349 (391)
Q Consensus 280 ~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~- 349 (391)
....+.++||+|+|+++.+..++++|+++.. ..+.++||+|+||++......++.+.. .|
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 3245799999999999999999999997522 235899999999999887645777742 12
Q ss_pred -CCceecEEEEeeEEEecC--CCccceee
Q 041993 350 -KYPCSRIRLEDVKLTYKN--QPAAASCS 375 (391)
Q Consensus 350 -~~~~~~v~~~nv~v~~~~--~~~~~~c~ 375 (391)
..+++||+|+||+.+... .+..+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 247999999999999875 23455554
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.86 E-value=1.4e-19 Score=173.96 Aligned_cols=202 Identities=19% Similarity=0.297 Sum_probs=163.2
Q ss_pred eEEEEeecceEEEeE---EEecCC--ce-------------eEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEE
Q 041993 147 SMGFSNCNNIAINGL---TSLNSQ--MY-------------HVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTI 208 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v---~i~n~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 208 (391)
++.+. .+|++|+|. +|.... .| .+.+..|+|++|+++++.+++. .++++..|+||+|
T Consensus 62 ~i~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFS-GTNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSINSATTLGV 136 (339)
T ss_dssp SEEEE-EESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEEE-cccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEEeccCCEEE
Confidence 45554 599999997 775332 22 4889999999999999999643 6799999999999
Q ss_pred EeeEEecC---------CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEe
Q 041993 209 LNTRISTG---------DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSW 278 (391)
Q Consensus 209 ~n~~i~~~---------dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~ 278 (391)
+++++.+. .|++.+.+ ++||+|+||++..+ +++++++. +||+|+||++.+. +|+.|.+.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999873 57888877 99999999999876 57999773 8999999999987 58999986
Q ss_pred cCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec---------CC
Q 041993 279 GRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC---------SS 349 (391)
Q Consensus 279 ~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 349 (391)
.....+.++||+|+|+++.+..++++|+++.. ..+.++||+|+||++......++.+.. .+
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 43355789999999999999999999998521 234899999999999987655776642 12
Q ss_pred --CCceecEEEEeeEEEecC--CCcccee
Q 041993 350 --KYPCSRIRLEDVKLTYKN--QPAAASC 374 (391)
Q Consensus 350 --~~~~~~v~~~nv~v~~~~--~~~~~~c 374 (391)
..+++||+|+||+.+... .+..+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 257999999999999876 3445565
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.86 E-value=2.8e-19 Score=171.58 Aligned_cols=201 Identities=17% Similarity=0.311 Sum_probs=161.9
Q ss_pred eEEEEeecceEEEeE---EEecCC--ce-------------eEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEE
Q 041993 147 SMGFSNCNNIAINGL---TSLNSQ--MY-------------HVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTI 208 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v---~i~n~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 208 (391)
++.+ ..+|++|+|. +|.... .| .+.+..|+|++|+++++.+++. .++++. |+||+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE-eCCEEE
Confidence 3444 4699999996 665332 12 4889999999999999999653 369999 999999
Q ss_pred EeeEEecC---------CceEEeCCCceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEe
Q 041993 209 LNTRISTG---------DDCVSIGPGTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSW 278 (391)
Q Consensus 209 ~n~~i~~~---------dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~ 278 (391)
+|+++.+. .|++.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|.+.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccC
Confidence 99999873 57899887 999999999998764 7999773 8999999999986 68999987
Q ss_pred cCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec---------CC
Q 041993 279 GRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC---------SS 349 (391)
Q Consensus 279 ~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~---------~~ 349 (391)
.....+.++||+|+|+++.+..++++|+++.. ..+.++||+|+||++......|+.+.. .|
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 43345789999999999999999999998521 234799999999999998655776632 12
Q ss_pred --CCceecEEEEeeEEEecC--CCcccee
Q 041993 350 --KYPCSRIRLEDVKLTYKN--QPAAASC 374 (391)
Q Consensus 350 --~~~~~~v~~~nv~v~~~~--~~~~~~c 374 (391)
..+++||+|+||+.+... .+..+.|
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 357999999999999876 3455666
No 26
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.85 E-value=7.4e-19 Score=171.37 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=169.2
Q ss_pred cEEEEEccEEEeccCc-------cccC------------CCCceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCC
Q 041993 84 RITIRIDGTLVAPSDY-------RVIG------------NAGNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSG 144 (391)
Q Consensus 84 ~~~l~~~G~l~~~~~~-------~~~~------------~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~ 144 (391)
+++|.+.|+|...... .-|. ....++.+.+++|++|+|-++.... .|
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp--~~------------ 175 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NF------------ 175 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS--SC------------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC--cE------------
Confidence 8888888888765431 1221 1235799999999999996664221 12
Q ss_pred CeeEEEEeecceEEEeEEEecC----CceeEEEeceeeEEEEeEEEEcCCCCCCCCceeee------ccccEEEEeeEEe
Q 041993 145 ATSMGFSNCNNIAINGLTSLNS----QMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQ------LSSDVTILNTRIS 214 (391)
Q Consensus 145 ~~~i~~~~~~nv~i~~v~i~n~----~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~------~s~nv~I~n~~i~ 214 (391)
.+.+.+|+|++|++++|.++ ...++++..|+||+|+|++|.+.+ |+|.+. .|+||+|+||.+.
T Consensus 176 --~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gD-----DcIaiks~~~~~~s~nI~I~n~~~~ 248 (376)
T 1bhe_A 176 --HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGD-----DNVAIKAYKGRAETRNISILHNDFG 248 (376)
T ss_dssp --SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSS-----CSEEEEECTTSCCEEEEEEEEEEEC
T ss_pred --EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCC-----CeEEEcccCCCCCceEEEEEeeEEE
Confidence 47889999999999999875 346899999999999999999743 788887 5999999999999
Q ss_pred cCCceEEeCC---CceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCC----CCeeE
Q 041993 215 TGDDCVSIGP---GTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRP----SNGFA 286 (391)
Q Consensus 215 ~~dD~i~i~~---~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~----~~g~i 286 (391)
.+ .++++++ +.+||+|+||++.+. .|++|++... ..+.++||+|+|++|.+...+|.|...+.. ....+
T Consensus 249 ~g-hGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i 325 (376)
T 1bhe_A 249 TG-HGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW 325 (376)
T ss_dssp SS-SCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEE
T ss_pred cc-ccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEE
Confidence 75 4688865 579999999999986 5999998532 235699999999999999999998764431 23579
Q ss_pred EEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeC
Q 041993 287 RNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSA 338 (391)
Q Consensus 287 ~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~ 338 (391)
+||+|+|++.++.. ++.+... +..+++||+|+||.+...
T Consensus 326 ~ni~~~ni~gt~~~-~~~l~g~------------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 326 SDITFKDVTSETKG-VVVLNGE------------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEEEEEECSCC-EEEEECT------------TCSSCEEEEEEEEECCTT
T ss_pred EEEEEEEEEEEecc-eEEEEeC------------CCCCeeeEEEEeEEEecC
Confidence 99999999998754 5555531 112468999999998765
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.84 E-value=9.6e-18 Score=165.41 Aligned_cols=170 Identities=17% Similarity=0.254 Sum_probs=143.9
Q ss_pred eeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEec----CCceEEeCCCceeEEEEeeEEcCCc-eEE
Q 041993 169 YHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRIST----GDDCVSIGPGTSNLWIENVACGPGH-GIS 243 (391)
Q Consensus 169 ~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~----~dD~i~i~~~~~nv~i~n~~~~~~~-gi~ 243 (391)
..+.+..|+|++|+++++.+++. .+|++..|+||+|+|++|.+ ..|++.+.. +||+|+||++..++ +|+
T Consensus 128 ~~i~~~~~~nv~I~~iti~nsp~----~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Ia 201 (422)
T 1rmg_A 128 RILRLTDVTHFSVHDIILVDAPA----FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVT 201 (422)
T ss_dssp EEEEEEEEEEEEEEEEEEECCSS----CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEE
T ss_pred eEEEEcccceEEEECeEEECCCc----eEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEE
Confidence 36889999999999999998643 58999999999999999997 468898876 99999999999875 699
Q ss_pred EeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcce
Q 041993 244 IGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGV 323 (391)
Q Consensus 244 igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 323 (391)
|++ ..+||+|+||++.+. +|+.|++.. ..+.++||+|+|+++.+..++++|+.. . ..+
T Consensus 202 i~s--------~~~nI~I~n~~~~~~-~GisIGS~g--~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G 259 (422)
T 1rmg_A 202 VKS--------PANNILVESIYCNWS-GGCAMGSLG--ADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSG 259 (422)
T ss_dssp EEE--------EEEEEEEEEEEEESS-SEEEEEEEC--TTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCE
T ss_pred eCC--------CCcCEEEEeEEEcCC-cceeecccC--CCCcEEEEEEEeEEEeccceEEEEEec-C----------CCc
Confidence 987 459999999999877 599999873 357899999999999999999999973 1 124
Q ss_pred EEEeEEEEeEEEeeCCcceEEEecC---------CCCceecEEEEeeEEEecC
Q 041993 324 KISDVTYQDVHGTSATEVAVNFDCS---------SKYPCSRIRLEDVKLTYKN 367 (391)
Q Consensus 324 ~i~nI~~~ni~~~~~~~~~~~i~~~---------~~~~~~~v~~~nv~v~~~~ 367 (391)
.++||+|+||++..... ++.+... +..+++||+|+||+.+..+
T Consensus 260 ~v~nI~~~NI~~~~v~~-~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 260 TVSNVLLENFIGHGNAY-SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEEEESC-SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEEEeEEEECccc-cEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 89999999999988764 6777531 3457999999999999753
No 28
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.82 E-value=3.4e-18 Score=164.66 Aligned_cols=203 Identities=21% Similarity=0.232 Sum_probs=160.2
Q ss_pred eEEEEeecceEEEe---EEEecCC----------------ceeEEE-e-ceeeEEEEeEEEEcCCCCCCCCceeeecccc
Q 041993 147 SMGFSNCNNIAING---LTSLNSQ----------------MYHVVF-N-GCNNVKLKGVKVLASGNSPNTDGIHVQLSSD 205 (391)
Q Consensus 147 ~i~~~~~~nv~i~~---v~i~n~~----------------~~~i~~-~-~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~n 205 (391)
+|.+ +.+|++|+| -+|.... ...+.+ . .|+|++|+++++.+++. .++++..|+|
T Consensus 63 ~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~----~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV----HCFDITGSSQ 137 (349)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS----EEEEEESCEE
T ss_pred eEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC----ceEEEeccCC
Confidence 4566 569999999 6675332 115777 6 68899999999999643 5799999999
Q ss_pred EEEEeeEEecC-----------------CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEEe
Q 041993 206 VTILNTRISTG-----------------DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTFT 267 (391)
Q Consensus 206 v~I~n~~i~~~-----------------dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~ 267 (391)
|+|+|+++.+. .|++.+.+ ++||+|+||++..+ ++++|++. +||+|+||++.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~ 207 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTSG---------TNIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESSE---------EEEEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeCC---------eEEEEEeEEEe
Confidence 99999999862 46788876 99999999999876 57999763 89999999998
Q ss_pred CCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec
Q 041993 268 GTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC 347 (391)
Q Consensus 268 ~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 347 (391)
+. +|+.|.+......+.++||+|+|+++.+..++++|+.... ..+.++||+|+||++......++.++.
T Consensus 208 ~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~ 276 (349)
T 1hg8_A 208 GG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG----------ATGTINNVTYQNIALTNISTYGVDVQQ 276 (349)
T ss_dssp SS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred CC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC----------CCccccceEEEEEEEEccccccEEEEe
Confidence 76 6899998743245789999999999999999999997521 245899999999999987645776642
Q ss_pred C---------C--CCceecEEEEeeEEEecC--CCccceee
Q 041993 348 S---------S--KYPCSRIRLEDVKLTYKN--QPAAASCS 375 (391)
Q Consensus 348 ~---------~--~~~~~~v~~~nv~v~~~~--~~~~~~c~ 375 (391)
. + ..+++||+|+||+.+... .+..+.|+
T Consensus 277 ~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 277 DYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp EECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred eccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 1 136999999999998865 24456664
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.81 E-value=1.8e-18 Score=165.53 Aligned_cols=199 Identities=16% Similarity=0.175 Sum_probs=157.2
Q ss_pred eEEEEeecceEEEeE--EEecCC---------------ceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeecccc-EEE
Q 041993 147 SMGFSNCNNIAINGL--TSLNSQ---------------MYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSD-VTI 208 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v--~i~n~~---------------~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~n-v~I 208 (391)
+|.+. ++|++|.|- +|.... ...+.+..|+ ++|+++++.+++. .++++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~----~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPA----QAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSS----CCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCc----ceEEEEccCCeEEE
Confidence 45564 699999983 664221 1237788999 9999999999754 4699999999 999
Q ss_pred EeeEEecC----------CceEEeCCCceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEE
Q 041993 209 LNTRISTG----------DDCVSIGPGTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKS 277 (391)
Q Consensus 209 ~n~~i~~~----------dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~ 277 (391)
+|+++.+. .|++.+ + ++||+|+||.+..++ +++|++. +||+|+||++.+. +|+.|++
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEee
Confidence 99999873 478888 5 999999999999875 6999883 8999999999986 6899998
Q ss_pred ecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcc-eEEEeEEEEeEEEeeCCcceEEEec-------CC
Q 041993 278 WGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSG-VKISDVTYQDVHGTSATEVAVNFDC-------SS 349 (391)
Q Consensus 278 ~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~i~nI~~~ni~~~~~~~~~~~i~~-------~~ 349 (391)
... .+.++||+|+|+++.+..++++|+.... .. +.++||+|+||++......|+.+.. .|
T Consensus 202 ~g~--~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p 269 (335)
T 1k5c_A 202 IAT--GKHVSNVVIKGNTVTRSMYGVRIKAQRT----------ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNP 269 (335)
T ss_dssp ECT--TCEEEEEEEESCEEEEEEEEEEEEEETT----------CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSC
T ss_pred ccC--CCCEEEEEEEeeEEECCCceEEEEEeCC----------CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCC
Confidence 732 6899999999999999999999997532 12 4799999999999987645777753 22
Q ss_pred --CCceecEEEEeeE--EEecC--CCccceee
Q 041993 350 --KYPCSRIRLEDVK--LTYKN--QPAAASCS 375 (391)
Q Consensus 350 --~~~~~~v~~~nv~--v~~~~--~~~~~~c~ 375 (391)
..+++||+|+||+ .+... .+..+.|+
T Consensus 270 ~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~ 301 (335)
T 1k5c_A 270 GTGAPFSDVNFTGGATTIKVNNAATRVTVECG 301 (335)
T ss_dssp CSSSCEEEEEECSSCEEEEECTTCEEEEEECS
T ss_pred CCCceEEEEEEEEEEEeeEEcCCceEEEEECC
Confidence 3589999999999 44433 23445553
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.76 E-value=5.5e-17 Score=164.29 Aligned_cols=234 Identities=14% Similarity=0.103 Sum_probs=167.4
Q ss_pred CcE-EEEcCCeEEEeeeeeeCCccCccEEEEEccEEEeccCc------cccCC---CCceEEEE------eeeeeEEec-
Q 041993 59 AAT-IYVPPGRFFLRNVAFQGPCKNNRITIRIDGTLVAPSDY------RVIGN---AGNWLFFQ------HVDGVTLNS- 121 (391)
Q Consensus 59 g~~-v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~------~~~~~---~~~~i~~~------~~~ni~I~G- 121 (391)
+.+ |++++|.++.+.+.+.+. . +++|.+.|+|...... ..|.. ....+.+. +++||.|+|
T Consensus 264 nvt~L~L~~GA~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Gi 340 (574)
T 1ogo_X 264 NTYWVYLAPGAYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGP 340 (574)
T ss_dssp TCCEEEECTTEEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESC
T ss_pred CCceEEecCCcEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECe
Confidence 566 999999999998888753 5 8999999998754211 11111 11223333 899999999
Q ss_pred eeEeCCCccccccccCCCCCCCCCeeEEEEeecce--EEEeEEEecCC---ceeEEEeceeeEEEEeEEEEcCCCCCCCC
Q 041993 122 GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNI--AINGLTSLNSQ---MYHVVFNGCNNVKLKGVKVLASGNSPNTD 196 (391)
Q Consensus 122 G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv--~i~~v~i~n~~---~~~i~~~~~~nv~i~n~~i~~~~~~~~~D 196 (391)
...+. + .| .+++.+|+|+ +|+++++.+++ ..++++. +||+|+|++|.+.+ |
T Consensus 341 ti~NS--p-~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gD-----D 396 (574)
T 1ogo_X 341 TINAP--P-FN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVND-----D 396 (574)
T ss_dssp EEECC--S-SC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESS-----C
T ss_pred EEECC--C-Cc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCC-----C
Confidence 55542 2 23 3788899999 99999998754 3478888 99999999999954 6
Q ss_pred ceeeeccccEEEEeeEEecCC-ce-EEeCC---CceeEEEEeeEEcCCc---------eEEEeecCCCCC------CCcE
Q 041993 197 GIHVQLSSDVTILNTRISTGD-DC-VSIGP---GTSNLWIENVACGPGH---------GISIGSLGKDLN------EAGV 256 (391)
Q Consensus 197 Gi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~~~nv~i~n~~~~~~~---------gi~igs~g~~~~------~~~i 256 (391)
+|.+.+ +||+|+||.++.+. .+ |.+++ ..+||+|+||++.+.+ +..||++..+.+ ..++
T Consensus 397 cIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV 475 (574)
T 1ogo_X 397 AIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI 475 (574)
T ss_dssp SEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE
T ss_pred EEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCceE
Confidence 888876 99999999999864 34 88875 4799999999996532 445565532210 1128
Q ss_pred EEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEec------CCc-cEEEEeeeCCCCCCCCCCCcceEEEeEE
Q 041993 257 QNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKN------VQN-PIIIDQNYCPDNIGCPGQVSGVKISDVT 329 (391)
Q Consensus 257 ~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~ 329 (391)
||+|+|++|.+...++ +... ....++||+|+|+++++ ... +..+... + ..++||+
T Consensus 476 -NI~f~NI~~~~v~~~i-i~i~---p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~------------~-~~v~nI~ 537 (574)
T 1ogo_X 476 -SMTVSNVVCEGLCPSL-FRIT---PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA------------S-GLTMGLA 537 (574)
T ss_dssp -EEEEEEEEECSSBCEE-EEEC---CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC------------T-TCCEEEE
T ss_pred -EEEEEeEEEEceeEee-EEEC---CCCCEEEEEEEeEEEeCccccccccccceeEecC------------C-CccceEE
Confidence 9999999999988875 4433 35689999999999986 111 1111110 1 3689999
Q ss_pred EEeEEEeeC
Q 041993 330 YQDVHGTSA 338 (391)
Q Consensus 330 ~~ni~~~~~ 338 (391)
|+|+++.+.
T Consensus 538 ~~NV~i~g~ 546 (574)
T 1ogo_X 538 ISAWTIGGQ 546 (574)
T ss_dssp EEEEEETTE
T ss_pred EEeEEEeCE
Confidence 999998654
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.75 E-value=1e-16 Score=162.30 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=167.8
Q ss_pred CCcE-EEEcCCeEEEeeeeee-CCccCccEEEEEccEEEeccCc------cccCC----CCceEEE------EeeeeeEE
Q 041993 58 RAAT-IYVPPGRFFLRNVAFQ-GPCKNNRITIRIDGTLVAPSDY------RVIGN----AGNWLFF------QHVDGVTL 119 (391)
Q Consensus 58 ~g~~-v~ip~G~Y~~~~~~l~-~~~~s~~~~l~~~G~l~~~~~~------~~~~~----~~~~i~~------~~~~ni~I 119 (391)
.+.+ |++++|.++.+++.+. +. . +++|.+.|+|...... ..|.. ....+.+ .+++||.|
T Consensus 221 s~~~~L~l~~GA~L~gs~~~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 221 SSVTWVYFAPGAYVKGAVEFLSTA--S-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TTCCEEEECTTEEEESCEEECCCS--S-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCCeEecCCCCEEEEEEEEecCc--e-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 4667 9999999998887776 32 3 8999888998775421 12211 1122333 78999999
Q ss_pred eceeEeCCCccccccccCCCCCCCCCeeEEEE-ee-cc--eEEEeEEEecCC---ceeEEEeceeeEEEEeEEEEcCCCC
Q 041993 120 NSGILDGQGTALWACKNSGKNCPSGATSMGFS-NC-NN--IAINGLTSLNSQ---MYHVVFNGCNNVKLKGVKVLASGNS 192 (391)
Q Consensus 120 ~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~-~~-~n--v~i~~v~i~n~~---~~~i~~~~~~nv~i~n~~i~~~~~~ 192 (391)
+|-++... ++| .+++. .| +| ++|+++++.+++ ..++++. +||+|+|++|.+.+
T Consensus 298 ~Giti~Ns--p~w--------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gD-- 357 (549)
T 1x0c_A 298 NGVTVSAP--PFN--------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDD-- 357 (549)
T ss_dssp ESCEEECC--SSC--------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESS--
T ss_pred ECcEEECC--Cce--------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCC--
Confidence 99444311 233 25544 45 69 999999998643 3578887 99999999999954
Q ss_pred CCCCceeeeccccEEEEeeEEecCC-ce-EEeCC---CceeEEEEeeEEcCCc-------eEEEeecCCC--------CC
Q 041993 193 PNTDGIHVQLSSDVTILNTRISTGD-DC-VSIGP---GTSNLWIENVACGPGH-------GISIGSLGKD--------LN 252 (391)
Q Consensus 193 ~~~DGi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~~~nv~i~n~~~~~~~-------gi~igs~g~~--------~~ 252 (391)
|+|.+.+ +||+|+||.+..+. .+ |.+++ ..+||+|+||++.+.. |..|++...+ .+
T Consensus 358 ---DcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d 433 (549)
T 1x0c_A 358 ---DGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSN 433 (549)
T ss_dssp ---CCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSC
T ss_pred ---CEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcC
Confidence 6888887 99999999998753 45 78864 4799999999997643 4225542111 12
Q ss_pred -CCcEEEEEEEeeEEeCCc-eEEEEEEecCCCCeeEEEEEEEEEEEecCC-----c-cEEEEeeeCCCCCCCCCCCcceE
Q 041993 253 -EAGVQNVTVKTVTFTGTQ-NGLRIKSWGRPSNGFARNILFRNAIMKNVQ-----N-PIIIDQNYCPDNIGCPGQVSGVK 324 (391)
Q Consensus 253 -~~~i~nI~i~n~~~~~~~-~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~-----~-~i~i~~~~~~~~~~~~~~~~~~~ 324 (391)
.+.++||+|+|++|.+.. .|+.+....+..++.++||+|+|+++++.. . +..+.. +... .+. ....
T Consensus 434 ~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G-~~~~--~~~---~~~~ 507 (549)
T 1x0c_A 434 HSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPV-WYDL--NNG---KQIT 507 (549)
T ss_dssp CCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC-CBBT--TTC---CBCC
T ss_pred CCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeC-CCcc--ccc---ccee
Confidence 457999999999998875 454332221224557999999999998764 2 222322 1110 011 1236
Q ss_pred EEeEEEEeEEEeeC
Q 041993 325 ISDVTYQDVHGTSA 338 (391)
Q Consensus 325 i~nI~~~ni~~~~~ 338 (391)
++||+|+||++.+.
T Consensus 508 v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 508 VTDFSIEGFTVGNT 521 (549)
T ss_dssp EEEEEEEEEEETTE
T ss_pred eeeEEEEeEEEeCe
Confidence 99999999987654
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.62 E-value=1.3e-14 Score=138.81 Aligned_cols=233 Identities=16% Similarity=0.240 Sum_probs=165.9
Q ss_pred cCCCCCeEEeecC----CccCCCCcccHHHHHHHHHHHcC------CCCCcEEEEcCCeEEE-eeeeeeCCccCccEEEE
Q 041993 20 SLAAPPSYNVVSF----GAKPDGRTDSTKAFLSAWANACG------SPRAATIYVPPGRFFL-RNVAFQGPCKNNRITIR 88 (391)
Q Consensus 20 ~~~~~~~~~v~d~----Ga~~dg~~d~t~aiq~Ai~~a~~------~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~ 88 (391)
+.++...++|++| +|++++.+|++++|+++|++..+ ..+|++|++|+|+|.+ +++.+. |+ .++|.
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivId---kp-~LtL~ 83 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVD---VS-YLTIA 83 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEEC---CT-TEEEE
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEe---cC-cEEEE
Confidence 3456789999999 89999999999999999987632 3579999999999986 778886 24 58998
Q ss_pred Ecc--E----EEeccCccc----cCC-----------CCceEEEEe-----eeeeEEeceeEeCCCccccccccCCCCCC
Q 041993 89 IDG--T----LVAPSDYRV----IGN-----------AGNWLFFQH-----VDGVTLNSGILDGQGTALWACKNSGKNCP 142 (391)
Q Consensus 89 ~~G--~----l~~~~~~~~----~~~-----------~~~~i~~~~-----~~ni~I~GG~idg~g~~~w~~~~~~~~~~ 142 (391)
+++ . |........ ++. .++.|.++. .++|++.+-+|+|-...-|- ..-.
T Consensus 84 G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G-----~s~~ 158 (410)
T 2inu_A 84 GFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGK-----NSYH 158 (410)
T ss_dssp CSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSST-----TSCC
T ss_pred ecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecCC-----CCcc
Confidence 864 2 321100111 111 122333332 27777777666665211110 1112
Q ss_pred CCCeeEEEEe-ecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeec-cccEEEEeeEEecCCce-
Q 041993 143 SGATSMGFSN-CNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQL-SSDVTILNTRISTGDDC- 219 (391)
Q Consensus 143 ~~~~~i~~~~-~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~dD~- 219 (391)
....+|.+.. .++++|+++.|.+. .+++.+..+++++|++..|.. ...||+++. ++...|+++.+..++|+
T Consensus 159 ~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~ 232 (410)
T 2inu_A 159 NGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGV 232 (410)
T ss_dssp CSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSE
T ss_pred cCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCC
Confidence 2345677765 89999999999888 589999999999999999995 346899998 88999999999998888
Q ss_pred -EEeCCCceeEEEEeeEE-cCC-ceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEE
Q 041993 220 -VSIGPGTSNLWIENVAC-GPG-HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKS 277 (391)
Q Consensus 220 -i~i~~~~~nv~i~n~~~-~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~ 277 (391)
|.+.. +.+.+|+++.+ ..+ .|+.+- ...+-.|+++.+.+...|+.+-.
T Consensus 233 gIyl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 233 TLLAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp EEEEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEE
T ss_pred EEEEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEE
Confidence 77766 88889999877 434 577772 23556788999998888887654
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.47 E-value=3.2e-11 Score=121.50 Aligned_cols=223 Identities=16% Similarity=0.187 Sum_probs=147.5
Q ss_pred CceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEec------eeeE
Q 041993 106 GNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNG------CNNV 179 (391)
Q Consensus 106 ~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~------~~nv 179 (391)
..++.+.+++|+.|++-++..... ..+.+....+ | .+++++. |+||
T Consensus 134 P~lI~f~~c~NV~I~gVti~NSp~----------------~gI~I~~~~~---------N---DGid~DGi~fd~~S~NV 185 (609)
T 3gq8_A 134 ESNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (609)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred ccEEEEEeeceEEEEeeEEEeCCC----------------CCeEEeCCCC---------C---ccccCCCccccccceeE
Confidence 357889999999999955532110 1122222211 1 3445555 9999
Q ss_pred EEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecC-----CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCC
Q 041993 180 KLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTG-----DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNE 253 (391)
Q Consensus 180 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~ 253 (391)
+|+|++|.... .|||.+.+|+||+|+||++..+ ..++.++.+++||+|+||++.++ .|+.|++.+ +.
T Consensus 186 ~I~Nc~I~~tG----DDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~ 258 (609)
T 3gq8_A 186 WIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (609)
T ss_dssp EEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TS
T ss_pred EEEeeEEEecC----CCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CC
Confidence 99999997643 3899999999999999999654 57899998889999999999986 589999874 23
Q ss_pred CcEEEEEEEeeEEeCCceEEEEEEecC-----CCCeeEEEEEEEEEEEecCC-c----------cEEEEee---------
Q 041993 254 AGVQNVTVKTVTFTGTQNGLRIKSWGR-----PSNGFARNILFRNAIMKNVQ-N----------PIIIDQN--------- 308 (391)
Q Consensus 254 ~~i~nI~i~n~~~~~~~~gi~i~~~~~-----~~~g~i~nI~~~ni~~~~~~-~----------~i~i~~~--------- 308 (391)
+.++||+|+|+...+.-....+..... +......||.++|++..... + ++.+..+
T Consensus 259 ~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~ 338 (609)
T 3gq8_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (609)
T ss_dssp CCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCce
Confidence 468999999987666534333322111 13447899999999986532 2 3444321
Q ss_pred -eCCCCCCCCCCCcceEE----EeEEEEeEEEeeCC--cceEEEecCCCCceecEEEEeeEEEec
Q 041993 309 -YCPDNIGCPGQVSGVKI----SDVTYQDVHGTSAT--EVAVNFDCSSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 309 -~~~~~~~~~~~~~~~~i----~nI~~~ni~~~~~~--~~~~~i~~~~~~~~~~v~~~nv~v~~~ 366 (391)
+.++ ..... .+...+ +||+|.+|.+++-. ...+++.|.+. ++..|.++|+++...
T Consensus 339 ~~~d~-~y~~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~~-~~~~v~i~n~~i~~s 400 (609)
T 3gq8_A 339 GYTDD-PNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSR-GGDAVNISNVTLNNS 400 (609)
T ss_dssp EECSC-TTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCCC-TTCCEEEEEEEEESC
T ss_pred EccCC-ccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCCC-cCCeEEEeccEEeec
Confidence 1211 11111 222333 79999998887764 34677777654 566777777777643
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.45 E-value=4.3e-11 Score=122.54 Aligned_cols=223 Identities=16% Similarity=0.175 Sum_probs=143.5
Q ss_pred CceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEec------eeeE
Q 041993 106 GNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNG------CNNV 179 (391)
Q Consensus 106 ~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~------~~nv 179 (391)
..++.+.+++|++|++-++..... ..+.+....+ | .++++++ |+||
T Consensus 134 P~lI~f~~ckNV~I~gVti~NSp~----------------~gI~I~np~~---------N---DGid~DGi~fdi~S~NV 185 (772)
T 3gqn_A 134 ESNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENI 185 (772)
T ss_dssp TCSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEE
T ss_pred ccEEEEEeeceEEEEeEEEEeCCC----------------CCEEEeCCCc---------C---CcCCCcCcccccccceE
Confidence 357889999999999955531110 1122222111 1 3445555 9999
Q ss_pred EEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecC-----CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCC
Q 041993 180 KLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTG-----DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNE 253 (391)
Q Consensus 180 ~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~ 253 (391)
+|+|++|.+.. .|||.+.+|+||+|+||.+..+ ..++.++++++||+|+||++.++ .|+.|++.+ +.
T Consensus 186 ~I~Nc~I~ntG----DDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~g 258 (772)
T 3gqn_A 186 WIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DA 258 (772)
T ss_dssp EEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TS
T ss_pred EEEeeEEEecC----cCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CC
Confidence 99999997643 3899999999999999999554 57899998889999999999876 589999764 33
Q ss_pred CcEEEEEEEeeEEeCCce--EEEEE-Eec--CCCCeeEEEEEEEEEEEecCC-c----------cEEEEee---------
Q 041993 254 AGVQNVTVKTVTFTGTQN--GLRIK-SWG--RPSNGFARNILFRNAIMKNVQ-N----------PIIIDQN--------- 308 (391)
Q Consensus 254 ~~i~nI~i~n~~~~~~~~--gi~i~-~~~--~~~~g~i~nI~~~ni~~~~~~-~----------~i~i~~~--------- 308 (391)
+.++||+|+++....... .++.- .+. .+.+-...||.++|++..... + ++.+..+
T Consensus 259 g~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~ 338 (772)
T 3gqn_A 259 PAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLT 338 (772)
T ss_dssp CCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEE
T ss_pred CccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCce
Confidence 469999999766554322 33211 110 112336789999999886432 2 3443321
Q ss_pred -eCCCCCCCCCCCcceEE----EeEEEEeEEEeeCC--cceEEEecCCCCceecEEEEeeEEEec
Q 041993 309 -YCPDNIGCPGQVSGVKI----SDVTYQDVHGTSAT--EVAVNFDCSSKYPCSRIRLEDVKLTYK 366 (391)
Q Consensus 309 -~~~~~~~~~~~~~~~~i----~nI~~~ni~~~~~~--~~~~~i~~~~~~~~~~v~~~nv~v~~~ 366 (391)
+.++ ..... .+...+ +||+|.+|.+++-. ...+++.|.+. ++..|.++|+++...
T Consensus 339 ~igd~-~y~~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~~-~~~~v~i~n~~i~~s 400 (772)
T 3gqn_A 339 GYTDD-PNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSR-GGDAVNISNVTLNNS 400 (772)
T ss_dssp EECSC-TTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCSTT-CCEEEEEEEEEEESC
T ss_pred eccCc-ccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCCC-CCCeEEEeccEEeec
Confidence 1111 11111 122333 79999998887664 34677766654 566777777777644
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.42 E-value=5.1e-12 Score=125.14 Aligned_cols=159 Identities=19% Similarity=0.178 Sum_probs=120.0
Q ss_pred EeecceEEEeE----EEecC-----CceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEE
Q 041993 151 SNCNNIAINGL----TSLNS-----QMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVS 221 (391)
Q Consensus 151 ~~~~nv~i~~v----~i~n~-----~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 221 (391)
.+.+|++|+|- ++... ....+.+..|+|++|+++++.+.+. +..+.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~--------ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT--------IFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC--------BSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce--------Eeeceeeeee------cCCCce
Confidence 46788888875 44322 1235788999999999999997321 2234445443 257777
Q ss_pred eCCCceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEe-----cCCCCeeEEEEEEEEEE
Q 041993 222 IGPGTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSW-----GRPSNGFARNILFRNAI 295 (391)
Q Consensus 222 i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~-----~~~~~g~i~nI~~~ni~ 295 (391)
+ .++||+|+||++.+++ ++ |+. ....++||+|+||++.+ ..|++|+++ .. ..+.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEE
Confidence 7 4899999999999875 45 322 24578999999999999 899999976 44 56799999999999
Q ss_pred EecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCcceEEEec
Q 041993 296 MKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATEVAVNFDC 347 (391)
Q Consensus 296 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 347 (391)
|++..++|.|+.. ...++||+|+||+++... .++.+..
T Consensus 242 ~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~q 279 (464)
T 1h80_A 242 CSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSDS 279 (464)
T ss_dssp EESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEECC
T ss_pred EECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEec
Confidence 9999999999831 125899999999999865 4676643
No 36
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.39 E-value=1.8e-11 Score=119.40 Aligned_cols=250 Identities=14% Similarity=0.112 Sum_probs=165.8
Q ss_pred ccCCCCCeEEeecCCcc-CCCCcccHH-HHHHHHHHHcCCCCCcEEEEcCCeEE--E-----eeeeeeCCccC----ccE
Q 041993 19 SSLAAPPSYNVVSFGAK-PDGRTDSTK-AFLSAWANACGSPRAATIYVPPGRFF--L-----RNVAFQGPCKN----NRI 85 (391)
Q Consensus 19 ~~~~~~~~~~v~d~Ga~-~dg~~d~t~-aiq~Ai~~a~~~~~g~~v~ip~G~Y~--~-----~~~~l~~~~~s----~~~ 85 (391)
++.+.++++.|..-|-+ ++|.+-.++ .||+|++.| .+|.+|+|.+|+|. + ..+.+. |+ +.+
T Consensus 9 s~~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a---~pGdtI~l~~GtY~~~~~e~~~~~i~~~---~sGt~~~pI 82 (400)
T 1ru4_A 9 SGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV---NPGELILLKPGTYTIPYTQGKGNTITFN---KSGKDGAPI 82 (400)
T ss_dssp TTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC---CTTCEEEECSEEEECCCBTTBCCCEEEC---CCCBTTBCE
T ss_pred ccccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC---CCCCEEEECCCeEccccccccceeEEec---CCCCCCCCE
Confidence 44567789999765543 233122111 799999865 56899999999998 3 335543 13 138
Q ss_pred EEEEcc----EEEeccCcc-ccCCCCceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEe
Q 041993 86 TIRIDG----TLVAPSDYR-VIGNAGNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAING 160 (391)
Q Consensus 86 ~l~~~G----~l~~~~~~~-~~~~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~ 160 (391)
+|...+ +|. ...+. .+......+.+ ..+.++|+|-+|...+. ..|.+.. .+.+|++
T Consensus 83 ti~~~~g~~~vI~-~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g~----------------~GI~v~g-s~~~i~n 143 (400)
T 1ru4_A 83 YVAAANCGRAVFD-FSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAGY----------------QGAYVIG-SHNTFEN 143 (400)
T ss_dssp EEEEGGGCCEEEE-CCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCSS----------------CSEEECS-SSCEEES
T ss_pred EEEEecCCCCEEe-CCccCCccccceeEEEE-ECCeEEEEeEEEEeCCC----------------CcEEEeC-CCcEEEe
Confidence 888762 443 21110 11000023555 46788888877754332 1466655 7889999
Q ss_pred EEEecCCceeEEEecee-eEEEEeEEEEcCCC----CCCCCceeeecc--ccEEEEeeEEec-CCceEEeCCCceeEEEE
Q 041993 161 LTSLNSQMYHVVFNGCN-NVKLKGVKVLASGN----SPNTDGIHVQLS--SDVTILNTRIST-GDDCVSIGPGTSNLWIE 232 (391)
Q Consensus 161 v~i~n~~~~~i~~~~~~-nv~i~n~~i~~~~~----~~~~DGi~~~~s--~nv~I~n~~i~~-~dD~i~i~~~~~nv~i~ 232 (391)
+++.+....++.+.... +.+|+++++....+ +.+.|||.++.+ ++..|++|++.. .||++.+......|+|+
T Consensus 144 ~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~ 223 (400)
T 1ru4_A 144 TAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIE 223 (400)
T ss_dssp CEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEE
T ss_pred EEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEE
Confidence 99999887789988754 88999999987543 246799998754 788999999986 68999997667789999
Q ss_pred eeEEcC--------------CceEEEeecCCCCCCCcEEEEEEEeeEEeCCc-eEEEEEEecCCCCeeEEEEEEEEEEEe
Q 041993 233 NVACGP--------------GHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQ-NGLRIKSWGRPSNGFARNILFRNAIMK 297 (391)
Q Consensus 233 n~~~~~--------------~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~-~gi~i~~~~~~~~g~i~nI~~~ni~~~ 297 (391)
||..+. +.|+.+|.+. ...+.+|+||...+.. .|+.....+ .+++++|+++.
T Consensus 224 nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n~~~-------~~~~i~nNt~~ 290 (400)
T 1ru4_A 224 NSWAFRNGINYWNDSAFAGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQNNNA-------GGVTVINNTSY 290 (400)
T ss_dssp SCEEESTTCCCSCCTTCCCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECTTCS-------SCCEEESCEEE
T ss_pred eEEEECCccccccccccccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeecCCC-------CCEEEECeEEE
Confidence 999853 2357776542 3456789999988763 577553221 23677777777
Q ss_pred cCCccEEEE
Q 041993 298 NVQNPIIID 306 (391)
Q Consensus 298 ~~~~~i~i~ 306 (391)
+....+.+.
T Consensus 291 ~N~~~~~~~ 299 (400)
T 1ru4_A 291 KNGINYGFG 299 (400)
T ss_dssp SSSEEEEEC
T ss_pred CCccceEEe
Confidence 665555554
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.35 E-value=1.2e-10 Score=113.34 Aligned_cols=200 Identities=12% Similarity=0.091 Sum_probs=114.4
Q ss_pred eeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeec-ceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCC
Q 041993 113 HVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCN-NIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGN 191 (391)
Q Consensus 113 ~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~-nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~ 191 (391)
++++++|+|-++.... ...|++..|. ++.+++..+.+...+++.+..|++.+|++.++...
T Consensus 132 ~~~nv~I~~~~i~n~~----------------~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~-- 193 (377)
T 2pyg_A 132 ADRDVTIERVEVREMS----------------GYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYAN-- 193 (377)
T ss_dssp CEEEEEEEEEEEECCS----------------SCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESC--
T ss_pred cccceEEEeEEEEecc----------------cceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEcc--
Confidence 5789999985443211 1235555544 57777777776667777777777777777766552
Q ss_pred CCCCCceeeec-cccEEEEeeEEecCCceEEeC-------CCceeEEEEeeEEcC--CceEEEeecCC---------CC-
Q 041993 192 SPNTDGIHVQL-SSDVTILNTRISTGDDCVSIG-------PGTSNLWIENVACGP--GHGISIGSLGK---------DL- 251 (391)
Q Consensus 192 ~~~~DGi~~~~-s~nv~I~n~~i~~~dD~i~i~-------~~~~nv~i~n~~~~~--~~gi~igs~g~---------~~- 251 (391)
..|||++.. |++++|+++.+...++++.+. ..++|++|+++.++. .+|+.+..... ..
T Consensus 194 --~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~ 271 (377)
T 2pyg_A 194 --DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNG 271 (377)
T ss_dssp --SSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCS
T ss_pred --ccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCC
Confidence 457777766 777888888877776666661 235566666665543 23333321100 00
Q ss_pred C----CCcEEEEEEEeeEEeCCceE-----EEEEEecCCCCe------eEEEEEEEEEEEecCCc-cEEEEeeeCCCCCC
Q 041993 252 N----EAGVQNVTVKTVTFTGTQNG-----LRIKSWGRPSNG------FARNILFRNAIMKNVQN-PIIIDQNYCPDNIG 315 (391)
Q Consensus 252 ~----~~~i~nI~i~n~~~~~~~~g-----i~i~~~~~~~~g------~i~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~ 315 (391)
. -...++++|+|+++.+...+ +.+..+.+ ..+ .-++++++++++.+... +..|... .
T Consensus 272 ~~GI~i~g~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~i~~N~i~g~~~~~~~i~~~-~----- 344 (377)
T 2pyg_A 272 SSGVRVYGAQDVQILDNQIHDNAQAAAVPEVLLQSFDD-TAGASGTYYTTLNTRIEGNTISGSANSTYGIQER-N----- 344 (377)
T ss_dssp SCSEEEEEEEEEEEESCEEESCCSSSSCCSEEEECEEE-TTSSSCEEECCBCCEEESCEEECCSSCCEEEEEC-S-----
T ss_pred CceEEEecCCCcEEECcEEECCcccccccceEEEEecC-CCccceeeeeccCeEEECCEEECcCCCccceEEc-c-----
Confidence 0 01357899999999986432 33332211 111 13788899999988653 2233321 0
Q ss_pred CCCCCcceEEEeEEEEeEEEeeCCcceEEEec
Q 041993 316 CPGQVSGVKISDVTYQDVHGTSATEVAVNFDC 347 (391)
Q Consensus 316 ~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~~ 347 (391)
...+++++++..+..... ++.+.+
T Consensus 345 -------~~~~~~~i~~n~i~~~~~-~v~~~g 368 (377)
T 2pyg_A 345 -------DGTDYSSLIDNDIAGVQQ-PIQLYG 368 (377)
T ss_dssp -------SSCBCCEEESCEEESSSE-EEECCC
T ss_pred -------CCCccEEEECcEEeCCcc-ceEEEc
Confidence 012456666666665543 555544
No 38
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.30 E-value=1.8e-10 Score=115.08 Aligned_cols=236 Identities=11% Similarity=0.021 Sum_probs=127.1
Q ss_pred CcchhhHHHHHHHHHHHhccCCCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCC-
Q 041993 1 MCYFHFLISILLLSIFNTSSLAAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGP- 79 (391)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~- 79 (391)
|+.++++.+ ++++|+.+++.|++.++.|. +.+.||+||++| .+|++|+|++|+|.-..+.+.+.
T Consensus 1 M~~~~~~~~-~lll~~~~~~~A~~~~i~V~-----------~~~~Lq~Ai~~A---~pGDtI~L~~GtY~~~~i~i~~sG 65 (506)
T 1dbg_A 1 MKMLNKLAG-YLLPIMVLLNVAPCLGQVVA-----------SNETLYQVVKEV---KPGGLVQIADGTYKDVQLIVSNSG 65 (506)
T ss_dssp --------------------------CEEC-----------SHHHHHHHHHHC---CTTCEEEECSEEEETCEEEECCCC
T ss_pred CchHHHHHH-HHHHHHHhhhhheeeEEEeC-----------CHHHHHHHHHhC---CCCCEEEECCCEEecceEEEecCC
Confidence 676665432 23333344445555556662 467899999866 56899999999997545665210
Q ss_pred -ccCccEEEEEc--c--EEEeccCccccCCCCceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeec
Q 041993 80 -CKNNRITIRID--G--TLVAPSDYRVIGNAGNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCN 154 (391)
Q Consensus 80 -~~s~~~~l~~~--G--~l~~~~~~~~~~~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~ 154 (391)
-.. .++|..+ + +|... ..+.+. .++++|+|-+|.+.+....... ...+..+.+. .+
T Consensus 66 t~~~-pItl~~~~~~~~vi~G~----------~~l~i~-g~~v~i~GL~i~~~~~~~~~~~------~~~~~~iav~-G~ 126 (506)
T 1dbg_A 66 KSGL-PITIKALNPGKVFFTGD----------AKVELR-GEHLILEGIWFKDGNRAIQAWK------SHGPGLVAIY-GS 126 (506)
T ss_dssp BTTB-CEEEEESSTTSEEEEES----------CEEEEC-SSSEEEESCEEEEECCCTTTCC------TTSCCSEEEC-SS
T ss_pred cCCC-CEEEECCCCCccEEeCC----------ceEEEE-cCCEEEECeEEECCCcceeeee------cccccceEEe-cC
Confidence 002 5777765 2 22211 134443 4778888866654332110000 0012234443 58
Q ss_pred ceEEEeEEEecCCce-eEEEe--------ceeeEEEEeEEEEcCCCCCCCC----ceeeec-------cccEEEEeeEEe
Q 041993 155 NIAINGLTSLNSQMY-HVVFN--------GCNNVKLKGVKVLASGNSPNTD----GIHVQL-------SSDVTILNTRIS 214 (391)
Q Consensus 155 nv~i~~v~i~n~~~~-~i~~~--------~~~nv~i~n~~i~~~~~~~~~D----Gi~~~~-------s~nv~I~n~~i~ 214 (391)
+++|++++|.+...- .+.+. ..++.+|++++|....+..... ||+++. +.+..|+++.|.
T Consensus 127 ~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~ 206 (506)
T 1dbg_A 127 YNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFS 206 (506)
T ss_dssp SCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEE
T ss_pred CeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEc
Confidence 999999999876331 02222 4567789999998854433333 788875 368999999998
Q ss_pred cC------CceEEeCC---CceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEE
Q 041993 215 TG------DDCVSIGP---GTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKS 277 (391)
Q Consensus 215 ~~------dD~i~i~~---~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~ 277 (391)
.. .+.+-++. .+.+.+|+++.+...+ |.++-+. ...+.+|+++++.++..++.+..
T Consensus 207 ~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~s-------kS~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 207 NPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITS-------KSQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp ECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEE-------ESBSCEEESCEEESCSSEEEEEE
T ss_pred ccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEE-------ecCCEEEECCEEEcccCcEEEee
Confidence 53 23444442 2578888888887643 3433221 01235788888888877776653
No 39
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.30 E-value=6.2e-11 Score=118.87 Aligned_cols=226 Identities=9% Similarity=-0.013 Sum_probs=148.8
Q ss_pred cEEEEEccEEEeccCccccCC-----CCceEEEEeeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEE---Eeecc
Q 041993 84 RITIRIDGTLVAPSDYRVIGN-----AGNWLFFQHVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGF---SNCNN 155 (391)
Q Consensus 84 ~~~l~~~G~l~~~~~~~~~~~-----~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~---~~~~n 155 (391)
+++|.+.|+|..... .-|.. .++.+.+.+++ |+|-++... .+.| .+++ ..|+|
T Consensus 151 NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS-DP~w--------------~I~iG~~~~c~N 211 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQNG-DVTW--------------AITLGWNGYGSN 211 (600)
T ss_dssp EEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEESC-CCSC--------------SEEECBTTBEEE
T ss_pred eEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEECC-CCcc--------------EEEeCCCCCccc
Confidence 788888888876432 12221 12335555555 777544322 1122 4788 89999
Q ss_pred eEEEeEE----EecCC-ceeEEEeceeeEEEEeEEEEcCCCCCCCCceee-ecc--ccEEEEeeEEecCCceEEeCC---
Q 041993 156 IAINGLT----SLNSQ-MYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHV-QLS--SDVTILNTRISTGDDCVSIGP--- 224 (391)
Q Consensus 156 v~i~~v~----i~n~~-~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~-~~s--~nv~I~n~~i~~~dD~i~i~~--- 224 (391)
++|++++ +.+++ ..++ |+|+|+.|.+.+ |+|.+ .+. .++.++ .+..+..++++++
T Consensus 212 VtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tGD-----DCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~ 277 (600)
T 2x6w_A 212 CYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGVE-----SCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVN 277 (600)
T ss_dssp EEEESCEEECCCCCSSCCCEE-------EEEECSSSEEEE-----SCEEECCCTTHHHHEEE--EEECSSSEEEESCEEE
T ss_pred EEEeCeEEcceEecCCCCCEE-------EEEEeeEEecCC-----cEEEEecCCCcCCeEEE--EEcCCCCcEEeccccc
Confidence 9999999 77644 2455 899999998743 78999 653 346777 5666777999987
Q ss_pred -CceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecC-CCCeeEEEEEEEEEEEecCCcc
Q 041993 225 -GTSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGR-PSNGFARNILFRNAIMKNVQNP 302 (391)
Q Consensus 225 -~~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~-~~~g~i~nI~~~ni~~~~~~~~ 302 (391)
+.+||+|+| .+.... . ..+.++||+|+|++|.+...++.+...+. .....++||+|+|++.+....+
T Consensus 278 ggV~NV~V~N-rIKt~~--------G--~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~a 346 (600)
T 2x6w_A 278 GYCRGAYVVM-HAAEAA--------G--AGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGERA 346 (600)
T ss_dssp EESEEEEEEE-CGGGCT--------T--TCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSCC
T ss_pred CcEEEEEEEE-EEEeec--------C--CCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEecccc
Confidence 368888888 433221 1 23579999999999999988888876432 2456899999999999865421
Q ss_pred -------EEEEeeeCCCCCCCCCCCcceEEEeEEEEeEEEeeCCc----ceEEEecCCCCceecEEEEeeE
Q 041993 303 -------IIIDQNYCPDNIGCPGQVSGVKISDVTYQDVHGTSATE----VAVNFDCSSKYPCSRIRLEDVK 362 (391)
Q Consensus 303 -------i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~----~~~~i~~~~~~~~~~v~~~nv~ 362 (391)
..+..... .+ .+.....|++|+|+|++...... +++-+ .+.+++++|.+=.
T Consensus 347 av~~~~g~~i~g~p~----~~-~~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 347 AFSAPFGAFIDIGPD----NS-GASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIANN 408 (600)
T ss_dssp TTSSSCEEEEEECCC----TT-CCSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEESCE
T ss_pred ccccccceEEEecCc----cc-ccccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEecCc
Confidence 33443211 11 12234579999999999866431 23332 3467788887755
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.19 E-value=1.1e-10 Score=119.56 Aligned_cols=97 Identities=21% Similarity=0.266 Sum_probs=74.3
Q ss_pred CCCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEe-eeeeeCCccCccEEEEEcc--EEEeccC
Q 041993 22 AAPPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLR-NVAFQGPCKNNRITIRIDG--TLVAPSD 98 (391)
Q Consensus 22 ~~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~-~~~l~~~~~s~~~~l~~~G--~l~~~~~ 98 (391)
+....++|+||||++||.+|||+|||+||+++ .++.+|+||+|+|++. +|.++ + +++|.+++ +|....
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~g~~v~~P~G~Y~vt~Ti~ip----~-~~~ivG~~~~~I~~~G- 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY---AGCKIIFFDAGTYIVTDTIQIP----A-GTQIVGEVWSVIMGTG- 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH---TTTSEEECCSEEEEESSCEEEC----T-TCEEECCSSEEEEECS-
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh---cCCCEEEECCCEeEECCeEEcC----C-CCEEEecccceEecCC-
Confidence 34458999999999999999999999999865 4588999999999986 58887 6 99999997 555432
Q ss_pred ccccC---CCCceEEE---EeeeeeEEeceeEeCCC
Q 041993 99 YRVIG---NAGNWLFF---QHVDGVTLNSGILDGQG 128 (391)
Q Consensus 99 ~~~~~---~~~~~i~~---~~~~ni~I~GG~idg~g 128 (391)
..|. .+.+++.+ .+...++|.+-.++-.|
T Consensus 467 -~~F~d~~~P~pvv~VG~~gd~G~veisdl~~~t~g 501 (758)
T 3eqn_A 467 -SKFTDYNNPQPVIQVGAPGSSGVVEITDMIFTTRG 501 (758)
T ss_dssp -GGGCCTTSCEEEEEESCTTCBSCEEEESCEEEECS
T ss_pred -ccccCCCCCeeeEEeCCCCCCCeEEEEeEEEEecC
Confidence 3343 33567777 34567888886665333
No 41
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.72 E-value=2.8e-07 Score=88.25 Aligned_cols=152 Identities=17% Similarity=0.222 Sum_probs=87.0
Q ss_pred cHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCCccCccEEEEEcc---EEEeccCccccCCCCceEEEEeeeeeE
Q 041993 42 STKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGPCKNNRITIRIDG---TLVAPSDYRVIGNAGNWLFFQHVDGVT 118 (391)
Q Consensus 42 ~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ni~ 118 (391)
+=..||+||+++.....-.+|+|++|+|.- .+.+. |+ +++|.++| ++....+..
T Consensus 43 ~f~TIq~Ai~aa~~~~~~~~I~I~~G~Y~E-~v~I~---k~-~itl~G~g~~~TiIt~~~~~------------------ 99 (364)
T 3uw0_A 43 EFSSINAALKSAPKDDTPFIIFLKNGVYTE-RLEVA---RS-HVTLKGENRDGTVIGANTAA------------------ 99 (364)
T ss_dssp -CCCHHHHHHHSCSSSSCEEEEECSEEECC-CEEEC---ST-TEEEEESCTTTEEEEECCCT------------------
T ss_pred CcccHHHHHhhcccCCCcEEEEEeCCEEEE-EEEEc---CC-eEEEEecCCCCeEEEccccc------------------
Confidence 556799999765211111399999999963 34554 24 78888875 221111100
Q ss_pred EeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc--------------------eeEEEe-cee
Q 041993 119 LNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM--------------------YHVVFN-GCN 177 (391)
Q Consensus 119 I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~--------------------~~i~~~-~~~ 177 (391)
++....+..+ ...+...+ ....++++++|++|+|... -.+.+. ..+
T Consensus 100 ---~~~~~~g~~~---------gt~~saTv-~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D 166 (364)
T 3uw0_A 100 ---GMLNPQGEKW---------GTSGSSTV-LVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSD 166 (364)
T ss_dssp ---TSBCTTCSBC---------CTTTCCSE-EECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCE
T ss_pred ---cccccccccc---------cccCeeEE-EEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCC
Confidence 1111111100 00111223 3468999999999988742 134444 467
Q ss_pred eEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEc
Q 041993 178 NVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACG 237 (391)
Q Consensus 178 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~ 237 (391)
...+++|.|.. ..|.+......+..+++|.|...-|-|-- .....++||++.
T Consensus 167 ~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~c~I~GtvDFIFG---~a~a~f~~c~i~ 218 (364)
T 3uw0_A 167 KARFKAVKLEG-----YQDTLYSKTGSRSYFSDCEISGHVDFIFG---SGITVFDNCNIV 218 (364)
T ss_dssp EEEEEEEEEEC-----SBSCEEECTTCEEEEESCEEEESEEEEEE---SSEEEEESCEEE
T ss_pred eEEEEeeEEEe-----cccceEeCCCCCEEEEcCEEEcCCCEECC---cceEEEEeeEEE
Confidence 78888888886 34566655346777888888865554332 235777888775
No 42
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.67 E-value=9.4e-07 Score=84.49 Aligned_cols=77 Identities=22% Similarity=0.250 Sum_probs=53.4
Q ss_pred CCCceeeeccccEEEEeeEEecC------------------CceEEeCCCceeEEEEeeEEcCCc-eEEEeecCCCC-CC
Q 041993 194 NTDGIHVQLSSDVTILNTRISTG------------------DDCVSIGPGTSNLWIENVACGPGH-GISIGSLGKDL-NE 253 (391)
Q Consensus 194 ~~DGi~~~~s~nv~I~n~~i~~~------------------dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~-~~ 253 (391)
..|+|.+..++||+|++|.|..+ |..+.++.++.+|+|+||.|...+ +.-+|+..... .+
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 56888888888999999988753 445667666889999999987643 55566542211 11
Q ss_pred CcEEEEEEEeeEEeCCc
Q 041993 254 AGVQNVTVKTVTFTGTQ 270 (391)
Q Consensus 254 ~~i~nI~i~n~~~~~~~ 270 (391)
.+..+|+|.++.+.+..
T Consensus 212 ~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRVT 228 (355)
T ss_pred cCcceEEEECcEEeCCc
Confidence 13457899999887753
No 43
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.65 E-value=7.2e-07 Score=84.66 Aligned_cols=93 Identities=12% Similarity=0.124 Sum_probs=50.8
Q ss_pred eeeEEEEeEEEEcCCCCCCCCceeee-----ccccEEEEeeEEecC------------CceEEeCCCceeEEEEeeEEcC
Q 041993 176 CNNVKLKGVKVLASGNSPNTDGIHVQ-----LSSDVTILNTRISTG------------DDCVSIGPGTSNLWIENVACGP 238 (391)
Q Consensus 176 ~~nv~i~n~~i~~~~~~~~~DGi~~~-----~s~nv~I~n~~i~~~------------dD~i~i~~~~~nv~i~n~~~~~ 238 (391)
++||.|+|++|.........|+|.+. .++||+|++|.+..+ |..+.++.++.+|+|+||.|..
T Consensus 94 ~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~ 173 (330)
T 2qy1_A 94 AHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYN 173 (330)
T ss_dssp CEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEE
T ss_pred CCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceecc
Confidence 34444444444432211245777776 467777777777432 4445666567778888877764
Q ss_pred Cc-eEEEeecCCCCCCCcEEEEEEEeeEEeCC
Q 041993 239 GH-GISIGSLGKDLNEAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 239 ~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~ 269 (391)
.+ ++-+|+....... ...+|+|.++.+.+.
T Consensus 174 h~k~~L~G~sd~~~~~-~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 174 YQKVALNGYSDSDTKN-SAARTTYHHNRFENV 204 (330)
T ss_dssp EEECCEESSSTTCGGG-GGCEEEEESCEEEEE
T ss_pred CCeEEEECCCCccccC-CCceEEEECcEEcCC
Confidence 32 3445543111111 124677777777653
No 44
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.62 E-value=3.1e-06 Score=80.10 Aligned_cols=53 Identities=21% Similarity=0.136 Sum_probs=29.6
Q ss_pred CCCceeeeccccEEEEeeEEecC-CceEEeCCCceeEEEEeeEEcCCc-eEEEee
Q 041993 194 NTDGIHVQLSSDVTILNTRISTG-DDCVSIGPGTSNLWIENVACGPGH-GISIGS 246 (391)
Q Consensus 194 ~~DGi~~~~s~nv~I~n~~i~~~-dD~i~i~~~~~nv~i~n~~~~~~~-gi~igs 246 (391)
..|+|.+..++||+|++|.+... |..+.++.++.+|+|+||.|.... +.-+|+
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~ 169 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGS 169 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCc
Confidence 45666666666666666666653 334555545666666666665432 344443
No 45
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.60 E-value=8.5e-07 Score=84.60 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=71.6
Q ss_pred eEEEEeecceEEEeEEEecCCc-eeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceE-EeCC
Q 041993 147 SMGFSNCNNIAINGLTSLNSQM-YHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCV-SIGP 224 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v~i~n~~~-~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i-~i~~ 224 (391)
.|.+..++|+.|++++|++... +.-.+...+. ...-.. .....|||.+..++||+|++|+|....|++ .++.
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~---~~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSES---IGVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETT---TEEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccC---cccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 3566678888888888876521 1000000000 000000 124678999999999999999999876665 5655
Q ss_pred CceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEE-eCC
Q 041993 225 GTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTF-TGT 269 (391)
Q Consensus 225 ~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~-~~~ 269 (391)
++.+|+|+||.+..- .++-+|+..... .....+|++.++.+ .+.
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 689999999999863 356676652221 12235788888888 554
No 46
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.57 E-value=4e-06 Score=79.02 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=61.9
Q ss_pred ceeeEEEEeEEEEcCCCCCCCCceeeec-cccEEEEeeEEec----------CCceEEeCCCceeEEEEeeEEcCC-ceE
Q 041993 175 GCNNVKLKGVKVLASGNSPNTDGIHVQL-SSDVTILNTRIST----------GDDCVSIGPGTSNLWIENVACGPG-HGI 242 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~----------~dD~i~i~~~~~nv~i~n~~~~~~-~gi 242 (391)
.++||.|+|++|.... ....|+|.+.. ++||+|++|.|.. .|..+.++.++.+|+|+||.|..- .+.
T Consensus 101 ~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~ 179 (326)
T 3vmv_A 101 NAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTM 179 (326)
T ss_dssp SEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECE
T ss_pred ecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEE
Confidence 3455555555555432 24678999986 8999999999952 366678888899999999999753 356
Q ss_pred EEeecCCCCCCCcEEEEEEEeeEEeCC
Q 041993 243 SIGSLGKDLNEAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 243 ~igs~g~~~~~~~i~nI~i~n~~~~~~ 269 (391)
-+|+..... ..-.+|+|.++.+.+.
T Consensus 180 LiG~sd~~~--~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 180 LVGHTDNAS--LAPDKITYHHNYFNNL 204 (326)
T ss_dssp EECSSSCGG--GCCEEEEEESCEEEEE
T ss_pred EECCCCCCc--ccCccEEEEeeEecCC
Confidence 666542111 0124788888888654
No 47
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.49 E-value=9.6e-06 Score=76.41 Aligned_cols=200 Identities=14% Similarity=0.146 Sum_probs=117.8
Q ss_pred cHHHHHHHHHHHcCCCCCc----EEEEcCCeEEEeeeeeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeee
Q 041993 42 STKAFLSAWANACGSPRAA----TIYVPPGRFFLRNVAFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGV 117 (391)
Q Consensus 42 ~t~aiq~Ai~~a~~~~~g~----~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni 117 (391)
+-.-||+||+++ +.+. +|+|++|+|. ..+.+... |+ +++|.++|. +..
T Consensus 18 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 69 (319)
T 1gq8_A 18 DYKTVSEAVAAA---PEDSKTRYVIRIKAGVYR-ENVDVPKK-KK-NIMFLGDGR----------------------TST 69 (319)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-CC-SEEEEESCT----------------------TTE
T ss_pred CccCHHHHHHhc---cccCCceEEEEEcCCeEe-eeeeccCC-Cc-cEEEEEcCC----------------------Ccc
Confidence 344599999865 2344 9999999996 34555311 24 688877651 111
Q ss_pred EEec-eeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc------eeEEEeceeeEEEEeEEEEcCC
Q 041993 118 TLNS-GILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM------YHVVFNGCNNVKLKGVKVLASG 190 (391)
Q Consensus 118 ~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~------~~i~~~~~~nv~i~n~~i~~~~ 190 (391)
.|.+ ... ..+. ...+...+.+ ..++++++|++|+|... -++.+ .++++.+++|.|..
T Consensus 70 iI~~~~~~-~~g~-----------~t~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-- 133 (319)
T 1gq8_A 70 IITASKNV-QDGS-----------TTFNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-- 133 (319)
T ss_dssp EEEECCCT-TTTC-----------CTGGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC--
T ss_pred EEEecccc-cCCC-----------CccceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc--
Confidence 2221 000 0000 0011123444 58999999999998642 24555 47888899999987
Q ss_pred CCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCC------ce-EEEeecCCCCCCCcEEEEEEEe
Q 041993 191 NSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPG------HG-ISIGSLGKDLNEAGVQNVTVKT 263 (391)
Q Consensus 191 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~------~g-i~igs~g~~~~~~~i~nI~i~n 263 (391)
..|++.....+ ..+++|.|...-|-|.- .....++||++..- .+ |.--+. .+...-....|.|
T Consensus 134 ---~QDTLy~~~~r-~~~~~c~I~G~vDFIfG---~~~a~f~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf~~ 203 (319)
T 1gq8_A 134 ---YQDSLYVHSNR-QFFINCFIAGTVDFIFG---NAAVVLQDCDIHARRPGSGQKNMVTAQGR---TDPNQNTGIVIQK 203 (319)
T ss_dssp ---STTCEEECSSE-EEEESCEEEESSSCEEE---SCEEEEESCEEEECCCSTTCCEEEEEECC---CSTTCCCEEEEES
T ss_pred ---cceeeeecCcc-EEEEecEEEeeeeEEec---CCcEEEEeeEEEEecCCCCCceEEEeCCC---CCCCCCceEEEEC
Confidence 44667776544 58899999876665542 33588899988641 12 222111 1122345688999
Q ss_pred eEEeCCce--------EEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 264 VTFTGTQN--------GLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 264 ~~~~~~~~--------gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
|++..... ...+. . .......++|.+..|.+.
T Consensus 204 c~i~~~~~~~~~~~~~~~yLG---R-pW~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 204 SRIGATSDLQPVQSSFPTYLG---R-PWKEYSRTVVMQSSITNV 243 (319)
T ss_dssp CEEEECTTTGGGGGGSCEEEE---C-CSSTTCEEEEESCEECTT
T ss_pred CEEecCCCccccccceeEEec---c-cCCCcceEEEEeccCCCc
Confidence 99876532 12332 1 233445788888888764
No 48
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.47 E-value=2.3e-06 Score=81.91 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=40.9
Q ss_pred ceeeEEEEeEEEEcC--CCCCCCCceeeeccccEEEEeeEEec-CCceEEe-CCCceeEEEEeeEEc
Q 041993 175 GCNNVKLKGVKVLAS--GNSPNTDGIHVQLSSDVTILNTRIST-GDDCVSI-GPGTSNLWIENVACG 237 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~--~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i-~~~~~nv~i~n~~~~ 237 (391)
.++||.|+|++|+.. ...+..|+|.+..++||+|++|.+.. +|..+.. ..++.+|+|+||.|.
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEE
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEec
Confidence 345555555555542 11235678888888888888888876 4555543 345788888888886
No 49
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.46 E-value=7.4e-06 Score=77.10 Aligned_cols=199 Identities=12% Similarity=0.131 Sum_probs=116.5
Q ss_pred cHHHHHHHHHHHcCCCCCc----EEEEcCCeEEEeeeeeeCCccCccEEEEEccEEEeccCccccCCCCceEEEEeeeee
Q 041993 42 STKAFLSAWANACGSPRAA----TIYVPPGRFFLRNVAFQGPCKNNRITIRIDGTLVAPSDYRVIGNAGNWLFFQHVDGV 117 (391)
Q Consensus 42 ~t~aiq~Ai~~a~~~~~g~----~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni 117 (391)
+-.-||+||+++ +.+. +|+|++|+|. ..+.+... |+ +++|.++|. +.+
T Consensus 14 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~-E~V~I~~~-k~-~Itl~G~g~----------------------~~t 65 (317)
T 1xg2_A 14 DYQTLAEAVAAA---PDKSKTRYVIYVKRGTYK-ENVEVASN-KM-NLMIVGDGM----------------------YAT 65 (317)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEE-CCEEECTT-SC-SEEEEESCT----------------------TTE
T ss_pred CcccHHHHHhhc---ccCCCceEEEEEcCCEEe-eeeecCCC-CC-cEEEEEcCC----------------------CCc
Confidence 344599999865 2344 9999999996 34555311 24 688877651 111
Q ss_pred EEec-ee-EeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc------eeEEEeceeeEEEEeEEEEcC
Q 041993 118 TLNS-GI-LDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM------YHVVFNGCNNVKLKGVKVLAS 189 (391)
Q Consensus 118 ~I~G-G~-idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~------~~i~~~~~~nv~i~n~~i~~~ 189 (391)
.|.+ .. .++.+ ..+...+.+ .+++++++|++|.|... -++.+ .++.+.+++|.|..
T Consensus 66 iI~~~~~~~~g~~-------------t~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g- 129 (317)
T 1xg2_A 66 TITGSLNVVDGST-------------TFRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA- 129 (317)
T ss_dssp EEEECCCTTTTCC-------------SGGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-
T ss_pred EEEecccccCCCc-------------ccceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-
Confidence 2221 00 00000 001223444 68899999999988642 24555 46788899998887
Q ss_pred CCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCC------ce-EEEeecCCCCCCCcEEEEEEE
Q 041993 190 GNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPG------HG-ISIGSLGKDLNEAGVQNVTVK 262 (391)
Q Consensus 190 ~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~------~g-i~igs~g~~~~~~~i~nI~i~ 262 (391)
..|++.....+ -.+++|.|...-|-|-- .....++||.+..- .+ |.--+. ..........|.
T Consensus 130 ----~QDTLy~~~~r-~~~~~c~I~G~vDFIfG---~~~avf~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf~ 198 (317)
T 1xg2_A 130 ----YQDTLYAHSQR-QFYRDSYVTGTVDFIFG---NAAVVFQKCQLVARKPGKYQQNMVTAQGR---TDPNQATGTSIQ 198 (317)
T ss_dssp ----STTCEEECSSE-EEEESCEEEESSSCEEE---CCEEEEESCEEEECCCSTTCCEEEEEECC---CCTTSCCEEEEE
T ss_pred ----cccceeecCcc-EEEEeeEEEeceeEEcC---CceEEEeeeEEEEeccCCCCccEEEecCc---CCCCCCcEEEEE
Confidence 34667666543 48899999876565442 23588888888631 12 222111 112234567899
Q ss_pred eeEEeCCce--------EEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 263 TVTFTGTQN--------GLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 263 n~~~~~~~~--------gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
||++..... ...+. . .......++|.+..|.+.
T Consensus 199 ~c~i~~~~~~~~~~~~~~~yLG---R-pW~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 199 FCNIIASSDLEPVLKEFPTYLG---R-PWKEYSRTVVMESYLGGL 239 (317)
T ss_dssp SCEEEECTTTGGGTTTSCEEEE---C-CSSTTCEEEEESCEECTT
T ss_pred CCEEecCCCccccccceeEEee---c-ccCCCceEEEEecccCCc
Confidence 999876532 12332 1 233445788888888764
No 50
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.42 E-value=2.9e-06 Score=80.96 Aligned_cols=133 Identities=14% Similarity=0.210 Sum_probs=75.4
Q ss_pred ecceEEEeEE----EecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCcee
Q 041993 153 CNNIAINGLT----SLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSN 228 (391)
Q Consensus 153 ~~nv~i~~v~----i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~n 228 (391)
.++++|.|.. |.. ...++.+..++||.|+|++|+..... ..+ +++.++.-.. ...-....|+|.+.. ++|
T Consensus 87 ~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~~--~~~-~I~~~~~~~~-g~~~~~~~DaI~i~~-s~n 160 (346)
T 1pxz_A 87 AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNTS--VLG-DVLVSESIGV-EPVHAQDGDAITMRN-VTN 160 (346)
T ss_dssp CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCCC--CSE-EEEEETTTEE-EEECCCCCCSEEEES-CEE
T ss_pred cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeeccC--CCc-eEEeccCccc-ccccCCCCCEEEEec-Cce
Confidence 4566776632 211 12567777888999999999864210 011 0100000000 111124578888875 899
Q ss_pred EEEEeeEEcCC-ceE-EEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEE-ecC
Q 041993 229 LWIENVACGPG-HGI-SIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIM-KNV 299 (391)
Q Consensus 229 v~i~n~~~~~~-~gi-~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~-~~~ 299 (391)
|.|++|.+..+ +|+ .+. ...++|||+||.|.+...++.+.+........-.+|+|.+..+ .+.
T Consensus 161 VwIDHcs~s~~~Dg~id~~--------~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 161 AWIDHNSLSDCSDGLIDVT--------LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp EEEESCEEECCSSEEEEEE--------SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSE
T ss_pred EEEEeeEEecCCCCcEeec--------cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCc
Confidence 99999999865 563 441 2358899999999987767666432110001124677777776 443
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.40 E-value=1.7e-05 Score=75.10 Aligned_cols=133 Identities=8% Similarity=0.082 Sum_probs=97.7
Q ss_pred eeEEEEeecceEEEeEEEecC-----------CceeEEEeceeeEEEEeEEEEcCCCCCCCCc-eeee-ccccEEEEeeE
Q 041993 146 TSMGFSNCNNIAINGLTSLNS-----------QMYHVVFNGCNNVKLKGVKVLASGNSPNTDG-IHVQ-LSSDVTILNTR 212 (391)
Q Consensus 146 ~~i~~~~~~nv~i~~v~i~n~-----------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DG-i~~~-~s~nv~I~n~~ 212 (391)
..|.+.+++|+.|++++|++. ...+|.+..++||.|++|.+... .|| +++. .+.+|+|++|.
T Consensus 83 ~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~ 157 (340)
T 3zsc_A 83 GGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNK 157 (340)
T ss_dssp EEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCE
T ss_pred CceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcE
Confidence 368888999999999999975 34679999999999999999974 455 6776 48999999999
Q ss_pred EecCCceEEeCCCc----------eeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeC----------C-
Q 041993 213 ISTGDDCVSIGPGT----------SNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTG----------T- 269 (391)
Q Consensus 213 i~~~dD~i~i~~~~----------~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~----------~- 269 (391)
|...+-..-+++.. .+|++.++.+.+. +.-++. . -.+++.|+.+++ .
T Consensus 158 f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r-~---------G~~Hv~NN~~~n~~~~~~~~~~~~ 227 (340)
T 3zsc_A 158 FVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR-F---------GMAHVFNNFYSMGLRTGVSGNVFP 227 (340)
T ss_dssp EESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE-S---------SEEEEESCEEECCCCCSCSSCCSC
T ss_pred eccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc-C---------CeEEEEccEEECCcccccccccee
Confidence 99876666555421 3899999999753 222221 1 136899999998 2
Q ss_pred ceEEEEEEecCCCCeeEEEEEEEEEEEecCCc
Q 041993 270 QNGLRIKSWGRPSNGFARNILFRNAIMKNVQN 301 (391)
Q Consensus 270 ~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~ 301 (391)
.+++... .+ ..|.+++..+++...
T Consensus 228 ~yai~~~--~~------a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 228 IYGVASA--MG------AKVHVEGNYFMGYGA 251 (340)
T ss_dssp CEEEEEE--TT------CEEEEESCEEECSCH
T ss_pred eeeEecC--CC------CEEEEECcEEECCCc
Confidence 1243222 22 468888888888776
No 52
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.38 E-value=0.00018 Score=65.50 Aligned_cols=231 Identities=17% Similarity=0.201 Sum_probs=146.7
Q ss_pred CCCeEEeecCCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCCeEEEeeeeeeCCccCccEEEEEc--cEEEeccCcc
Q 041993 23 APPSYNVVSFGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPGRFFLRNVAFQGPCKNNRITIRID--GTLVAPSDYR 100 (391)
Q Consensus 23 ~~~~~~v~d~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~~~~~ 100 (391)
.++++..++|||.++-.+|++++|.+.|.. ...|.+|.|+|....+.+ + ...|++. |+|+..+..
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~gvf~ss~i~~-----~-~c~l~g~g~g~~~~~~~~- 127 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDGVFSSSGINS-----N-YCNLDGRGSGVLSHRSST- 127 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSEEEEECCEEE-----S-CCEEECTTTEEEEECSSS-
T ss_pred hheeeecccccccCCcccCcHHHHHhhhcc------cccEeccccccccccccc-----c-cccccccCCceeeeecCC-
Confidence 456788899999999999999999999853 346999999998877776 4 7788876 487754333
Q ss_pred ccCCCCceEEEE-----eeeeeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCceeEEEec
Q 041993 101 VIGNAGNWLFFQ-----HVDGVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQMYHVVFNG 175 (391)
Q Consensus 101 ~~~~~~~~i~~~-----~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~~~i~~~~ 175 (391)
+..+.|. ...+++|++ +-. .......-+.+.....++++++.+.|....++.+.-
T Consensus 128 -----gn~lvfn~p~~g~ls~~ti~~-----nk~----------~ds~qg~qvs~~gg~dvsv~~i~fsn~~g~gfslia 187 (542)
T 2x3h_A 128 -----GNYLVFNNPRTGRLSNITVES-----NKA----------TDTTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIA 187 (542)
T ss_dssp -----SCCEEEESCEEEEEEEEEEEC-----CCS----------STTCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEE
T ss_pred -----CCEEEEeCCCCcceeeEEEec-----ccC----------CccccceEEEecCCCcceEeeeeeeecCCCceeEEE
Confidence 2233332 245666655 211 011223347788889999999999887666655442
Q ss_pred ------eeeEEEEeEEEEcCCCCCCCC--ceeeeccccEEEEeeEEec--CCceEEeCCCceeEEEEeeEEcCC-ceEEE
Q 041993 176 ------CNNVKLKGVKVLASGNSPNTD--GIHVQLSSDVTILNTRIST--GDDCVSIGPGTSNLWIENVACGPG-HGISI 244 (391)
Q Consensus 176 ------~~nv~i~n~~i~~~~~~~~~D--Gi~~~~s~nv~I~n~~i~~--~dD~i~i~~~~~nv~i~n~~~~~~-~gi~i 244 (391)
-+...|++++=.-.+.+.+.. .+-+.+|.|-.|++...++ +-.++.++...+.-.+.|..=..+ |-..-
T Consensus 188 yp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yn 267 (542)
T 2x3h_A 188 YPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYN 267 (542)
T ss_dssp ECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEE
T ss_pred cCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEEC
Confidence 245778887766555544332 3345688999999999988 346777877555555555554444 34555
Q ss_pred eecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEE
Q 041993 245 GSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFR 292 (391)
Q Consensus 245 gs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ 292 (391)
|.++... ..|-.|+.+-..+..++..+.- .+ .+..|++|.+.
T Consensus 268 gte~~~a----psnn~i~~vmannpkyaavv~g-kg-s~nlisdvlvd 309 (542)
T 2x3h_A 268 GTEGPIA----PSNNLIKGVMANNPKYAAVVAG-KG-STNLISDVLVD 309 (542)
T ss_dssp ECSSSCC----CCSCEEEEEEEESCSSEEEECC-SC-BSCEEEEEEEE
T ss_pred CccCCcC----CccchhhHhhcCCCceEEEEEe-cC-ccceehheeee
Confidence 7775432 2333455555555545433321 11 33456666554
No 53
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.32 E-value=9.5e-06 Score=77.48 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=57.5
Q ss_pred EEEeceeeEEEEeEEEEcCC-CCCCCCceeeeccccEEEEeeEEecC--------------CceEEeCCCceeEEEEeeE
Q 041993 171 VVFNGCNNVKLKGVKVLASG-NSPNTDGIHVQLSSDVTILNTRISTG--------------DDCVSIGPGTSNLWIENVA 235 (391)
Q Consensus 171 i~~~~~~nv~i~n~~i~~~~-~~~~~DGi~~~~s~nv~I~n~~i~~~--------------dD~i~i~~~~~nv~i~n~~ 235 (391)
+.+..++||.|+|++|...+ .....|+|.+..++||+|++|.|..+ |..+.++.++.+|+|+||.
T Consensus 105 l~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~ 184 (353)
T 1air_A 105 IWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNY 184 (353)
T ss_dssp EEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCE
T ss_pred EEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeE
Confidence 33334455555555555321 12356788888888888888888642 4445666667888888888
Q ss_pred EcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCC
Q 041993 236 CGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 236 ~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~ 269 (391)
|...+ +.-+|+...+ .. .+|+|.++.+.+.
T Consensus 185 f~~h~k~~LiG~sd~~---~g-~~vT~hhN~f~~~ 215 (353)
T 1air_A 185 IHGVKKVGLDGSSSSD---TG-RNITYHHNYYNDV 215 (353)
T ss_dssp EEEEEECCEESSSTTC---CC-CEEEEESCEEEEE
T ss_pred EcCCCceeEECCCcCC---CC-ceEEEEceEEcCC
Confidence 87543 3444554211 12 5788888887654
No 54
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.28 E-value=4.8e-05 Score=72.35 Aligned_cols=148 Identities=16% Similarity=0.230 Sum_probs=82.4
Q ss_pred cHHHHHHHHHHHcCCCCC---cEEEEcCCeEEEeeeeeeCCccCccEEEEEcc---EEEeccCccccCCCCceEEEEeee
Q 041993 42 STKAFLSAWANACGSPRA---ATIYVPPGRFFLRNVAFQGPCKNNRITIRIDG---TLVAPSDYRVIGNAGNWLFFQHVD 115 (391)
Q Consensus 42 ~t~aiq~Ai~~a~~~~~g---~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ 115 (391)
+-.-||+||+++ . .+ .+|+|++|+|.- .+.+. |+ +++|.++| ++..-.+..
T Consensus 17 ~f~TIq~Ai~aa-p--~~~~~~~I~I~~G~Y~E-~V~I~---k~-~Itl~G~g~~~tiI~~~~~~--------------- 73 (342)
T 2nsp_A 17 TFKTIADAIASA-P--AGSTPFVILIKNGVYNE-RLTIT---RN-NLHLKGESRNGAVIAAATAA--------------- 73 (342)
T ss_dssp CBSSHHHHHHTS-C--SSSSCEEEEECSEEEEC-CEEEC---ST-TEEEEESCTTTEEEEECCCT---------------
T ss_pred CcchHHHHHHhc-c--cCCCcEEEEEeCCEEEE-EEEEe---cC-eEEEEecCCCCeEEEecccc---------------
Confidence 445599999765 2 24 399999999964 45554 24 78888875 221110000
Q ss_pred eeEEeceeEeCCCccccccccCCCCCCCCCeeEEEEeecceEEEeEEEecCCc------------------e--eEEE-e
Q 041993 116 GVTLNSGILDGQGTALWACKNSGKNCPSGATSMGFSNCNNIAINGLTSLNSQM------------------Y--HVVF-N 174 (391)
Q Consensus 116 ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~n~~~------------------~--~i~~-~ 174 (391)
++....+..+ .. .....+.+ .+++++++|++|+|... . ++.+ .
T Consensus 74 ------~~~~~~g~~~-gT--------~~satv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v 137 (342)
T 2nsp_A 74 ------GTLKSDGSKW-GT--------AGSSTITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK 137 (342)
T ss_dssp ------TCBCTTSCBC-HH--------HHTCSEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT
T ss_pred ------cccccccCcc-cc--------cceeEEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee
Confidence 0110011000 00 00112333 58889999999987641 1 2321 3
Q ss_pred ceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEc
Q 041993 175 GCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACG 237 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~ 237 (391)
.++.+.+++|.|.. ..|.+.... .+..+++|.|...-|-|- + .....++||++.
T Consensus 138 ~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~c~I~G~vDFIF-G--~a~a~f~~c~i~ 191 (342)
T 2nsp_A 138 SGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSDCRISGTVDFIF-G--DGTALFNNCDLV 191 (342)
T ss_dssp TCBSEEEEEEEEEC-----STTCEEECS-SEEEEESCEEEESEEEEE-E--SSEEEEESCEEE
T ss_pred ccCcEEEEeeEEec-----ccceEEECC-CCEEEEcCEEEeceEEEe-C--CceEEEecCEEE
Confidence 46777777777776 335555553 467777777776544332 2 234777777775
No 55
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.23 E-value=4.1e-05 Score=73.30 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=91.3
Q ss_pred EEEE-eecceEEEeEEEecCC------ceeEEEeceeeEEEEeEEEEcCCCCCCCCcee---eeccccEEEEeeEEecCC
Q 041993 148 MGFS-NCNNIAINGLTSLNSQ------MYHVVFNGCNNVKLKGVKVLASGNSPNTDGIH---VQLSSDVTILNTRISTGD 217 (391)
Q Consensus 148 i~~~-~~~nv~i~~v~i~n~~------~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~d 217 (391)
|.+. .++||.|++++|++.. ..+|.+..++++.|+++++.... |+.. ...+.+|+|++|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~-----d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIG-----RQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEES-----SCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccC-----cCceeecccccccEEEECcEecCCc
Confidence 6777 8999999999998642 25789999999999999998643 3322 236899999999998431
Q ss_pred ---------c--eEEeCCCceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeCC-ceEEEEEEecCCCC
Q 041993 218 ---------D--CVSIGPGTSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTGT-QNGLRIKSWGRPSN 283 (391)
Q Consensus 218 ---------D--~i~i~~~~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~~-~~gi~i~~~~~~~~ 283 (391)
+ ...+...+.++++.++.+.+. +.-++. .-..+++.|+.+++. .+++...
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~------- 264 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIG------- 264 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEEC-------
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecC-------
Confidence 1 233322267999999998653 212221 113588889988874 2344332
Q ss_pred eeEEEEEEEEEEEecCCccEE
Q 041993 284 GFARNILFRNAIMKNVQNPII 304 (391)
Q Consensus 284 g~i~nI~~~ni~~~~~~~~i~ 304 (391)
.-..+.+++..+++...|+.
T Consensus 265 -~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 265 -TGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp -TTEEEEEESCEEEEEEEEEC
T ss_pred -CCceEEEEeeEEECCCcccC
Confidence 12457788888877766643
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.23 E-value=9.6e-06 Score=77.44 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=93.6
Q ss_pred eEEEEeecceEEEeEEEecCC-----ceeEEEeceeeEEEEeEEEEcCCCC--------CCCCce-eee-ccccEEEEee
Q 041993 147 SMGFSNCNNIAINGLTSLNSQ-----MYHVVFNGCNNVKLKGVKVLASGNS--------PNTDGI-HVQ-LSSDVTILNT 211 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v~i~n~~-----~~~i~~~~~~nv~i~n~~i~~~~~~--------~~~DGi-~~~-~s~nv~I~n~ 211 (391)
.|.+..++|+.|++++|+..+ ..+|.+..++||.|++|.+....+. ...||. ++. .+.+|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 578889999999999998654 3579999999999999999864221 113554 554 5899999999
Q ss_pred EEecCCceEEeCCC----ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeCCc-eEEEEEEecCCCCe
Q 041993 212 RISTGDDCVSIGPG----TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQ-NGLRIKSWGRPSNG 284 (391)
Q Consensus 212 ~i~~~dD~i~i~~~----~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~-~gi~i~~~~~~~~g 284 (391)
.|...+-..-+++. ..+|++.++.+.+. +.-++.. -.+++.|+.+++.. +++.... +
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~~--~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRG----------GLVHAYNNLYTNITGSGLNVRQ--N---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEES----------SEEEEESCEEEEESSCSEEEET--T----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcC----------ceEEEEccEEECCCCceeccCC--C----
Confidence 99865444444331 15899999998642 2222310 14778888888743 4554331 1
Q ss_pred eEEEEEEEEEEEecCCccE
Q 041993 285 FARNILFRNAIMKNVQNPI 303 (391)
Q Consensus 285 ~i~nI~~~ni~~~~~~~~i 303 (391)
..+.+++..+++...|+
T Consensus 248 --~~i~~e~N~F~~~~~p~ 264 (353)
T 1air_A 248 --GQALIENNWFEKAINPV 264 (353)
T ss_dssp --CEEEEESCEEEEEESSE
T ss_pred --cEEEEEceEEECCCCce
Confidence 23666666666666665
No 57
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.18 E-value=7.2e-06 Score=79.84 Aligned_cols=99 Identities=17% Similarity=0.244 Sum_probs=65.5
Q ss_pred EEEeceeeEEEEeEEEEcCCC---------------CCCCCceeeeccccEEEEeeEEecC------------------C
Q 041993 171 VVFNGCNNVKLKGVKVLASGN---------------SPNTDGIHVQLSSDVTILNTRISTG------------------D 217 (391)
Q Consensus 171 i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~------------------d 217 (391)
+.+..++||.|+|++|....+ ....|+|.+..++||+|++|.|..+ |
T Consensus 150 l~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~D 229 (416)
T 1vbl_A 150 FLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHD 229 (416)
T ss_dssp EEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred EEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeecc
Confidence 444455566666666654311 1356899998899999999999853 5
Q ss_pred ceEEeCCCceeEEEEeeEEcCCc-eEEEeecCCCCCCCcEEEEEEEeeEEeCC
Q 041993 218 DCVSIGPGTSNLWIENVACGPGH-GISIGSLGKDLNEAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 218 D~i~i~~~~~nv~i~n~~~~~~~-gi~igs~g~~~~~~~i~nI~i~n~~~~~~ 269 (391)
..+.++.++.+|+|+||.|...+ ++-+|+......+.+...|||.++.+.+.
T Consensus 230 Gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 230 GALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 56777777899999999997643 46666642221112234688999988654
No 58
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.15 E-value=1e-05 Score=77.39 Aligned_cols=92 Identities=22% Similarity=0.185 Sum_probs=68.6
Q ss_pred eEEEe-ceeeEEEEeEEEEcCCC--CCCCCceeeeccccEEEEeeEEec-CCceEE-eCCCceeEEEEeeEEcCC-----
Q 041993 170 HVVFN-GCNNVKLKGVKVLASGN--SPNTDGIHVQLSSDVTILNTRIST-GDDCVS-IGPGTSNLWIENVACGPG----- 239 (391)
Q Consensus 170 ~i~~~-~~~nv~i~n~~i~~~~~--~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~-i~~~~~nv~i~n~~~~~~----- 239 (391)
++.+. .++||.|+|++|+.... ....|+|.+..++||+|++|.+.. +|..+. ...++.+|+|+||.|...
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~ 204 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSA 204 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBT
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccc
Confidence 46676 78999999999997432 246799999999999999999987 454442 344689999999999742
Q ss_pred -----c--eEEE-eecCCCCCCCcEEEEEEEeeEEeCCc
Q 041993 240 -----H--GISI-GSLGKDLNEAGVQNVTVKTVTFTGTQ 270 (391)
Q Consensus 240 -----~--gi~i-gs~g~~~~~~~i~nI~i~n~~~~~~~ 270 (391)
| +..+ |+ -.++++.++.+.+..
T Consensus 205 ~~~G~H~~~~~l~G~---------sd~vT~~~N~f~~~~ 234 (359)
T 1qcx_A 205 TCNGHHYWGVYLDGS---------NDMVTLKGNYFYNLS 234 (359)
T ss_dssp TSSSBBSCCEEECCS---------SEEEEEESCEEESBC
T ss_pred cCcccccceeEEecC---------CCCeehcccEeccCc
Confidence 2 2233 22 147999999998753
No 59
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.09 E-value=1.2e-05 Score=77.80 Aligned_cols=99 Identities=12% Similarity=0.200 Sum_probs=67.5
Q ss_pred eEEEeceeeEEEEeEEEEcCCC---------------CCCCCceeeeccccEEEEeeEEecC------------------
Q 041993 170 HVVFNGCNNVKLKGVKVLASGN---------------SPNTDGIHVQLSSDVTILNTRISTG------------------ 216 (391)
Q Consensus 170 ~i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~------------------ 216 (391)
++.+.. +||.|+|++|....+ ....|+|.+..++||+|++|.|..+
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 344555 666677776664321 1356899999999999999999853
Q ss_pred CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCCCCCcEEEEEEEeeEEeCC
Q 041993 217 DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDLNEAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 217 dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~~~~~i~nI~i~n~~~~~~ 269 (391)
|..+.++.++.+|+|+||.|.+. .+.-+|+......+.+..+|+|.++.+.+.
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 55677777789999999999863 356666642221112234799999988654
No 60
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.06 E-value=9.7e-05 Score=70.64 Aligned_cols=136 Identities=11% Similarity=0.128 Sum_probs=85.8
Q ss_pred eEEEE-eecceEEEeEEEecC------CceeEEEeceeeEEEEeEEEEcCCCCCCCCcee---eeccccEEEEeeEEecC
Q 041993 147 SMGFS-NCNNIAINGLTSLNS------QMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIH---VQLSSDVTILNTRISTG 216 (391)
Q Consensus 147 ~i~~~-~~~nv~i~~v~i~n~------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~ 216 (391)
.|.+. .++||.|++++|++. ...+|.+..++++.|+++++.... |+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~-----d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIG-----RQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEES-----SCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCC-----CCcEEecccCcceEEEECcEecCC
Confidence 37787 899999999999873 235799999999999999998643 3332 34689999999999853
Q ss_pred Cc-----------eEEeCCCceeEEEEeeEEcCCc--eEEEeecCCCCCCCcEEEEEEEeeEEeCC-ceEEEEEEecCCC
Q 041993 217 DD-----------CVSIGPGTSNLWIENVACGPGH--GISIGSLGKDLNEAGVQNVTVKTVTFTGT-QNGLRIKSWGRPS 282 (391)
Q Consensus 217 dD-----------~i~i~~~~~nv~i~n~~~~~~~--gi~igs~g~~~~~~~i~nI~i~n~~~~~~-~~gi~i~~~~~~~ 282 (391)
++ ...+...+.++++.++.+.+.. .-++. .-+.+++.|+.+++. .+++.+..
T Consensus 200 ~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---------~g~~~hv~NN~~~n~~~~~i~~~~----- 265 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---------DNTLLHAVNNYWYDISGHAFEIGE----- 265 (359)
T ss_dssp CSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC---------TTCEEEEESCEEEEEEEEEEEECT-----
T ss_pred cccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc---------CCceEEEECCEEecccceEEeccC-----
Confidence 21 1223222567888888876421 11110 012467777777663 23443321
Q ss_pred CeeEEEEEEEEEEEecCCccEE
Q 041993 283 NGFARNILFRNAIMKNVQNPII 304 (391)
Q Consensus 283 ~g~i~nI~~~ni~~~~~~~~i~ 304 (391)
-..+.+++..+++...|+.
T Consensus 266 ---~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 ---GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp ---TCEEEEESCEEEEEEEEEE
T ss_pred ---CcEEEEEccEEECCCCcee
Confidence 1235666666655544443
No 61
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.02 E-value=2.6e-05 Score=74.61 Aligned_cols=76 Identities=22% Similarity=0.276 Sum_probs=55.5
Q ss_pred CCCceeeec-cccEEEEeeEEecC------------------CceEEeCCCceeEEEEeeEEcCC-ceEEEeecCCCC-C
Q 041993 194 NTDGIHVQL-SSDVTILNTRISTG------------------DDCVSIGPGTSNLWIENVACGPG-HGISIGSLGKDL-N 252 (391)
Q Consensus 194 ~~DGi~~~~-s~nv~I~n~~i~~~------------------dD~i~i~~~~~nv~i~n~~~~~~-~gi~igs~g~~~-~ 252 (391)
..|+|.+.. ++||+|++|.|..+ |..+.++.++.+|+|++|.|..- .++-+|+..... .
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~ 221 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQ 221 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHH
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCccc
Confidence 578999998 99999999999853 66678887899999999999763 345566542110 0
Q ss_pred CCcEEEEEEEeeEEeCC
Q 041993 253 EAGVQNVTVKTVTFTGT 269 (391)
Q Consensus 253 ~~~i~nI~i~n~~~~~~ 269 (391)
+.+-..|||.++.+.+.
T Consensus 222 d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 222 DKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp HTTCCEEEEESCEEEEE
T ss_pred ccCcceEEEECeEEcCc
Confidence 11234799999999764
No 62
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.93 E-value=0.00012 Score=70.05 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=66.9
Q ss_pred EeecceEEEeEEEecC---------------CceeEEEec-eeeEEEEeEEEEcCCCC------------CCCCc-eeee
Q 041993 151 SNCNNIAINGLTSLNS---------------QMYHVVFNG-CNNVKLKGVKVLASGNS------------PNTDG-IHVQ 201 (391)
Q Consensus 151 ~~~~nv~i~~v~i~n~---------------~~~~i~~~~-~~nv~i~n~~i~~~~~~------------~~~DG-i~~~ 201 (391)
.+++||.|++++|++. ...+|.+.. ++||.|++|++....+. .-.|| +++.
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 3455666666665532 134677777 88888888888764210 11354 4565
Q ss_pred -ccccEEEEeeEEecCCceEEeCCC---------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeC
Q 041993 202 -LSSDVTILNTRISTGDDCVSIGPG---------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTG 268 (391)
Q Consensus 202 -~s~nv~I~n~~i~~~dD~i~i~~~---------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~ 268 (391)
.+.+|+|++|.|...+-+.-+++. ..+|++.++.+.+. +.-++ .. -.+++.|+.+.+
T Consensus 191 ~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~--------R~--G~~Hv~NN~~~~ 259 (361)
T 1pe9_A 191 RGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV--------RY--GSIHSFNNVFKG 259 (361)
T ss_dssp TTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE--------SS--CEEEEESCEEEE
T ss_pred cCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc--------cc--ceEEEEcceEec
Confidence 588999999999875555555542 12799999998642 22222 01 137888888864
No 63
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.84 E-value=0.00012 Score=70.12 Aligned_cols=129 Identities=9% Similarity=0.152 Sum_probs=95.3
Q ss_pred cceEEEeEEEecC-----C------ceeEEEec-eeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEE
Q 041993 154 NNIAINGLTSLNS-----Q------MYHVVFNG-CNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVS 221 (391)
Q Consensus 154 ~nv~i~~v~i~n~-----~------~~~i~~~~-~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 221 (391)
++++|++++|.+. . .-++.+.. .+++.|+++.|.... -||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~-----fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLE-----HALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCS-----EEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEeccc-----EEEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666554 3 34688876 788999999999843 48999999999999999998778999
Q ss_pred eCCCceeEEEEeeEEcCC-ce--EEEeecCCCCCCCcEEEEEEEeeEE-eCCceEEEEEEecCCCCeeEEEEEEEEEEEe
Q 041993 222 IGPGTSNLWIENVACGPG-HG--ISIGSLGKDLNEAGVQNVTVKTVTF-TGTQNGLRIKSWGRPSNGFARNILFRNAIMK 297 (391)
Q Consensus 222 i~~~~~nv~i~n~~~~~~-~g--i~igs~g~~~~~~~i~nI~i~n~~~-~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~ 297 (391)
+...+....|+++.+... +| |.+ + ...+..|+++.+ ...++|+++..... ..|++.+++
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl--~-------ns~~~~I~~N~i~~~~R~gIh~m~s~~--------~~i~~N~f~ 273 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLA--E-------NHEGLLVTGNNLFPRGRSLIEFTGCNR--------CSVTSNRLQ 273 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEE--E-------SEESCEEESCEECSCSSEEEEEESCBS--------CEEESCEEE
T ss_pred eccccccceEecceeeecCCCCEEEE--E-------eCCCCEEECCCcccCcceEEEEEccCC--------CEEECCEEe
Confidence 988788999999999864 35 655 2 457788999977 55899999874322 444445554
Q ss_pred cCCccEE
Q 041993 298 NVQNPII 304 (391)
Q Consensus 298 ~~~~~i~ 304 (391)
+...++.
T Consensus 274 ~~~~Gi~ 280 (410)
T 2inu_A 274 GFYPGML 280 (410)
T ss_dssp ESSSCSE
T ss_pred cceeEEE
Confidence 4444433
No 64
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.84 E-value=0.00051 Score=64.62 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=90.7
Q ss_pred EEEEeecceEEEeEEEecCC---ceeEEEec-eeeEEEEeEEEEcCC----CCCCCCce-eee-ccccEEEEeeEEecCC
Q 041993 148 MGFSNCNNIAINGLTSLNSQ---MYHVVFNG-CNNVKLKGVKVLASG----NSPNTDGI-HVQ-LSSDVTILNTRISTGD 217 (391)
Q Consensus 148 i~~~~~~nv~i~~v~i~n~~---~~~i~~~~-~~nv~i~n~~i~~~~----~~~~~DGi-~~~-~s~nv~I~n~~i~~~d 217 (391)
|.+.+++|+.|++++|++.. ..+|.+.. ++||.|++|++.... +....||+ ++. .+.+|+|++|.|...+
T Consensus 97 l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 67779999999999999764 46799997 999999999997531 11223544 665 4899999999999765
Q ss_pred ceEEeCCC------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeCC-ceEEEEEEecCCCCeeEEE
Q 041993 218 DCVSIGPG------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTGT-QNGLRIKSWGRPSNGFARN 288 (391)
Q Consensus 218 D~i~i~~~------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~n 288 (391)
-+.-+++. ..+|++.++.+.+. +.-++.. ..+++.|+.+++. .+++.... + ..
T Consensus 177 k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~~--~------a~ 238 (326)
T 3vmv_A 177 KTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRY----------ADVHMFNNYFKDINDTAINSRV--G------AR 238 (326)
T ss_dssp ECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEES----------CEEEEESCEEEEESSCSEEEET--T------CE
T ss_pred eEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccC----------CcEEEEccEEECCCceEEeecC--C------cE
Confidence 55555542 24899999998642 2222210 1478889988875 35654431 1 23
Q ss_pred EEEEEEEEecC
Q 041993 289 ILFRNAIMKNV 299 (391)
Q Consensus 289 I~~~ni~~~~~ 299 (391)
|.+++..+++.
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 55555555544
No 65
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.83 E-value=0.00034 Score=66.75 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=77.0
Q ss_pred eEEEEeecceEEEeEEEecCC---------------ceeEEEeceeeEEEEeEEEEcCCC---------CC---CCCc-e
Q 041993 147 SMGFSNCNNIAINGLTSLNSQ---------------MYHVVFNGCNNVKLKGVKVLASGN---------SP---NTDG-I 198 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v~i~n~~---------------~~~i~~~~~~nv~i~n~~i~~~~~---------~~---~~DG-i 198 (391)
.|.+.+++||.|++++|++.. ..+|.+..+++|.|++|++....+ +. -.|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 366677888888888887531 346888889999999999986421 00 1355 4
Q ss_pred eee-ccccEEEEeeEEecCCceEEeCCC---------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEE
Q 041993 199 HVQ-LSSDVTILNTRISTGDDCVSIGPG---------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTF 266 (391)
Q Consensus 199 ~~~-~s~nv~I~n~~i~~~dD~i~i~~~---------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~ 266 (391)
++. .+++|+|++|.|...+-+.-+++. ..+|++.+|.+.+. +.-++. . -.+++.|+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR--------~--G~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR--------F--GSIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee--------c--ceEEEEcceE
Confidence 555 589999999999987666655542 12799999999653 222221 0 1277888888
Q ss_pred eCC
Q 041993 267 TGT 269 (391)
Q Consensus 267 ~~~ 269 (391)
++.
T Consensus 247 ~~~ 249 (355)
T 1pcl_A 247 LGD 249 (355)
T ss_pred Ecc
Confidence 654
No 66
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.69 E-value=0.00023 Score=69.18 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=78.6
Q ss_pred eEEEEeecceEEEeEEEecC-------------------CceeEEEeceeeEEEEeEEEEcCCCC------------CCC
Q 041993 147 SMGFSNCNNIAINGLTSLNS-------------------QMYHVVFNGCNNVKLKGVKVLASGNS------------PNT 195 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v~i~n~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~ 195 (391)
.|.+.+++||.|++++|++. ...+|.+..+++|.|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47777899999999999753 13468899999999999999864210 113
Q ss_pred Cc-eeee-ccccEEEEeeEEecCCceEEeCCC--------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEe
Q 041993 196 DG-IHVQ-LSSDVTILNTRISTGDDCVSIGPG--------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKT 263 (391)
Q Consensus 196 DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n 263 (391)
|| +++. .+.+|+|++|.|...+-+.-+++. -.+|++.+|.+.+. +.-++. . -.+++.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R-------~---G~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR-------F---GQVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES-------S---CEEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc-------c---ceEEEEc
Confidence 55 4565 589999999999976555555542 13699999999642 222221 1 1378999
Q ss_pred eEEeCC
Q 041993 264 VTFTGT 269 (391)
Q Consensus 264 ~~~~~~ 269 (391)
+.+++.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 999753
No 67
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.64 E-value=0.00014 Score=70.64 Aligned_cols=110 Identities=9% Similarity=0.049 Sum_probs=83.5
Q ss_pred eEEEEeecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeecc-ccEEEEeeEEecC---------
Q 041993 147 SMGFSNCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLS-SDVTILNTRISTG--------- 216 (391)
Q Consensus 147 ~i~~~~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s-~nv~I~n~~i~~~--------- 216 (391)
.|.+ ..++++|++++|.+....++.+.. ++.+|++++++... ..||.+... .+.+|++|.+...
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~----~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNR----NTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCS----SCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCC----ceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4555 789999999999988877888887 68899999999742 248999864 4899999999763
Q ss_pred CceEEeCCC-ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeCCc
Q 041993 217 DDCVSIGPG-TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTGTQ 270 (391)
Q Consensus 217 dD~i~i~~~-~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~ 270 (391)
.|++.++.. .+..+|++|.++.. +|+.+- .....++|+||..++..
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--------~~~~~v~i~nn~a~~Ng 231 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--------DSPQKVVIENSWAFRNG 231 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--------TCCSCCEEESCEEESTT
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--------ecCCCEEEEeEEEECCc
Confidence 267877642 37888999999853 577762 12245789999988753
No 68
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.49 E-value=0.00038 Score=65.88 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=94.0
Q ss_pred eEEEE-eecceEEEeEEEecCC----ceeEEEe-----ceeeEEEEeEEEEcCCC------CCCCCc-eeee-ccccEEE
Q 041993 147 SMGFS-NCNNIAINGLTSLNSQ----MYHVVFN-----GCNNVKLKGVKVLASGN------SPNTDG-IHVQ-LSSDVTI 208 (391)
Q Consensus 147 ~i~~~-~~~nv~i~~v~i~n~~----~~~i~~~-----~~~nv~i~n~~i~~~~~------~~~~DG-i~~~-~s~nv~I 208 (391)
.|.+. +++||.|++++|++.. ..+|.+. .++||.|++|++....+ ....|| +++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 47777 8999999999998764 4679998 59999999999975321 111254 4665 4899999
Q ss_pred EeeEEecCCceEEeCCC-------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEeeEEeCC-ceEEEEEEe
Q 041993 209 LNTRISTGDDCVSIGPG-------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTVTFTGT-QNGLRIKSW 278 (391)
Q Consensus 209 ~n~~i~~~dD~i~i~~~-------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~~~~~~-~~gi~i~~~ 278 (391)
++|.|...+-+.-+++. ..+|++.++.+.+. +.-++. . -.+++.|+.+++. .+++....
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r--------~--G~~hv~NN~~~n~~~~~i~~~~- 235 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR--------F--GLSHIYNNYFNNVTTSGINVRM- 235 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE--------S--SEEEEESCEEEEECSCSEEEET-
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee--------c--ceEEEEeeEEEcccceEeccCC-
Confidence 99999876555555542 15999999999642 222221 0 1377888888774 35654431
Q ss_pred cCCCCeeEEEEEEEEEEEecCCccEE
Q 041993 279 GRPSNGFARNILFRNAIMKNVQNPII 304 (391)
Q Consensus 279 ~~~~~g~i~nI~~~ni~~~~~~~~i~ 304 (391)
+ ..|.+++..+++...|+.
T Consensus 236 -~------~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 236 -G------GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp -T------CEEEEESCEEEEEESSEE
T ss_pred -C------cEEEEEccEEECCCCcee
Confidence 1 236667776666555643
No 69
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.47 E-value=0.0044 Score=59.95 Aligned_cols=111 Identities=12% Similarity=0.160 Sum_probs=73.2
Q ss_pred EEEEeecceEEEeEEEecC-------------------CceeEEEeceeeEEEEeEEEEcCCCC------------CCCC
Q 041993 148 MGFSNCNNIAINGLTSLNS-------------------QMYHVVFNGCNNVKLKGVKVLASGNS------------PNTD 196 (391)
Q Consensus 148 i~~~~~~nv~i~~v~i~n~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~D 196 (391)
|.+.. +||.|++++|++. ...+|.+..++||.|++|++....+. .-.|
T Consensus 145 l~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~D 223 (399)
T 2o04_A 145 FQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHD 223 (399)
T ss_dssp EEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred EEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccc
Confidence 55555 7777777777642 23468888889999999999864210 1135
Q ss_pred ce-eee-ccccEEEEeeEEecCCceEEeCCC--------ceeEEEEeeEEcCC--ceEEEeecCCCCCCCcEEEEEEEee
Q 041993 197 GI-HVQ-LSSDVTILNTRISTGDDCVSIGPG--------TSNLWIENVACGPG--HGISIGSLGKDLNEAGVQNVTVKTV 264 (391)
Q Consensus 197 Gi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------~~nv~i~n~~~~~~--~gi~igs~g~~~~~~~i~nI~i~n~ 264 (391)
|. ++. .+.+|+|++|.|...+-+.-+++. -.+|++.++.+.+. +.-++. . -.+++.|+
T Consensus 224 gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R--------~--G~~Hv~NN 293 (399)
T 2o04_A 224 GQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR--------F--GQVHVYNN 293 (399)
T ss_dssp CSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES--------S--CEEEEESC
T ss_pred cceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc--------c--ceEEEEcc
Confidence 53 565 589999999999876555555542 13899999998642 222221 1 13889999
Q ss_pred EEeCC
Q 041993 265 TFTGT 269 (391)
Q Consensus 265 ~~~~~ 269 (391)
.+.+.
T Consensus 294 ~~~n~ 298 (399)
T 2o04_A 294 YYEGS 298 (399)
T ss_dssp EEECC
T ss_pred eEECC
Confidence 99764
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.13 E-value=0.048 Score=52.64 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=74.0
Q ss_pred EEEeecceEEEeEEEecCCce----------eEEEeceeeEEEEeEEEEcCCCCCCCCceee-----------eccccEE
Q 041993 149 GFSNCNNIAINGLTSLNSQMY----------HVVFNGCNNVKLKGVKVLASGNSPNTDGIHV-----------QLSSDVT 207 (391)
Q Consensus 149 ~~~~~~nv~i~~v~i~n~~~~----------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~-----------~~s~nv~ 207 (391)
.....+++..++++|.|.... .+.+ ..+...+.+|.|....| -+.. .....-.
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqy 269 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTL 269 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEE
Confidence 445688999999999887432 2333 35677778888776432 2222 1234567
Q ss_pred EEeeEEecCCceEEeCCCceeEEEEeeEEcCC------ce-EEEeecCCCCCCCcEEEEEEEeeEEeCCc-eEEEEE-Ee
Q 041993 208 ILNTRISTGDDCVSIGPGTSNLWIENVACGPG------HG-ISIGSLGKDLNEAGVQNVTVKTVTFTGTQ-NGLRIK-SW 278 (391)
Q Consensus 208 I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~------~g-i~igs~g~~~~~~~i~nI~i~n~~~~~~~-~gi~i~-~~ 278 (391)
+++|.|...=|-|-- .....+++|.+..- .| |.-.+. ....-..+.|.||++.... ....+. .|
T Consensus 270 y~~CyIeGtVDFIFG---~a~AvFe~C~I~s~~~~~~~~g~ITA~~t----~~~~~~Gfvf~nC~ita~~~~~~yLGRPW 342 (422)
T 3grh_A 270 VTNSYIEGDVDIVSG---RGAVVFDNTEFRVVNSRTQQEAYVFAPAT----LSNIYYGFLAVNSRFNAFGDGVAQLGRSL 342 (422)
T ss_dssp EESCEEEESEEEEEE---SSEEEEESCEEEECCSSCSSCCEEEEECC----BTTCCCCEEEESCEEEECSSSCBEEEEEE
T ss_pred EEecEEeccccEEcc---CceEEEEeeEEEEecCCCCCceEEEecCC----CCCCCCEEEEECCEEEeCCCCCEEcCCCC
Confidence 777777765443332 33677777777521 12 222221 1122344667777777421 122332 23
Q ss_pred cCCCCeeEEEEEEEEEEEecC
Q 041993 279 GRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 279 ~~~~~g~i~nI~~~ni~~~~~ 299 (391)
.. ..-..-.|+|.+..|.+.
T Consensus 343 ~~-ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 343 DV-DANTNGQVVIRDSAINEG 362 (422)
T ss_dssp CC-STTBCCEEEEESCEECTT
T ss_pred CC-cCCcCccEEEEeCcccCc
Confidence 21 221234577777777654
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.72 E-value=0.0082 Score=57.87 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=52.5
Q ss_pred eEEEEeecceEEE-eEEEecCCceeEEEeceeeEEEEeEEEEcCCCCC-CCCceee------eccccEEEEeeEEecCCc
Q 041993 147 SMGFSNCNNIAIN-GLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSP-NTDGIHV------QLSSDVTILNTRISTGDD 218 (391)
Q Consensus 147 ~i~~~~~~nv~i~-~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~-~~DGi~~------~~s~nv~I~n~~i~~~dD 218 (391)
.+++..|++++++ ++.+. .+|+||.|.||+|...+|.- -.-|.-. ++|+|++ ..
T Consensus 197 TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hg 258 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SE 258 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CE
T ss_pred EEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cc
Confidence 4889999999988 66664 37999999999999977521 1112211 3466666 35
Q ss_pred eEEeCCC-----cee-EEEEeeEEcCCc
Q 041993 219 CVSIGPG-----TSN-LWIENVACGPGH 240 (391)
Q Consensus 219 ~i~i~~~-----~~n-v~i~n~~~~~~~ 240 (391)
++.+++. .+| |.+++|.+...+
T Consensus 259 av~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 259 AIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp EEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred cEEECchhhcccccccEEEEeeeccCCc
Confidence 5666553 578 999999886543
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.41 E-value=0.3 Score=41.52 Aligned_cols=128 Identities=20% Similarity=0.263 Sum_probs=69.7
Q ss_pred eEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEec-CCceEEeCCCceeEEEEeeEEcCCce--EEEeecCCCCCCC
Q 041993 178 NVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRIST-GDDCVSIGPGTSNLWIENVACGPGHG--ISIGSLGKDLNEA 254 (391)
Q Consensus 178 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~nv~i~n~~~~~~~g--i~igs~g~~~~~~ 254 (391)
..+++|+.|-. ...||||... +-+++|+.++. +.|++.++. ...++|.+.-..++.. |.. .
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~--N------- 116 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQL--N------- 116 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEE--C-------
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEE--C-------
Confidence 45556665543 2457777753 56677777765 677777775 4556666555544332 333 1
Q ss_pred cEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCccEEEEeeeCCCCCCCCCCCcceEEEeEEEEeEE
Q 041993 255 GVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNPIIIDQNYCPDNIGCPGQVSGVKISDVTYQDVH 334 (391)
Q Consensus 255 ~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~~~ni~ 334 (391)
+--.+.|+|.++.+ .|-...+... -..=++|.++|+++.+....+ ++++ . +.....+.|+.++|+.
T Consensus 117 g~Gtv~I~nF~~~~--~GKl~RSCGn--c~~~r~v~i~~v~~~n~k~~l-~rtd-S--------~~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 117 APCTFKVKNFTATN--IGKLVRQNGN--TTFKVVIYLEDVTLNNVKSCV-AKSD-S--------PVSELWYHNLNVNNCK 182 (196)
T ss_dssp SSEEEEEEEEEEEE--EEEEEEECTT--CCSCEEEEEEEEEEEEEEEEE-EECC-C--------TTCEEEEEEEEEEEEE
T ss_pred CCceEEEeeEEEcc--CCEEEEcCCC--CCceeEEEEeCeEEeCCEEEE-EEcC-C--------CCCEEEEecceecCCC
Confidence 11235566666643 2333333321 223467777777777654332 2221 0 1245678888887776
Q ss_pred E
Q 041993 335 G 335 (391)
Q Consensus 335 ~ 335 (391)
-
T Consensus 183 ~ 183 (196)
T 3t9g_A 183 T 183 (196)
T ss_dssp E
T ss_pred c
Confidence 3
No 73
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.97 E-value=0.043 Score=54.67 Aligned_cols=142 Identities=6% Similarity=0.041 Sum_probs=96.5
Q ss_pred eecceEEEeEEEecC-CceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCC-----ceEEeCCC
Q 041993 152 NCNNIAINGLTSLNS-QMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGD-----DCVSIGPG 225 (391)
Q Consensus 152 ~~~nv~i~~v~i~n~-~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~d-----D~i~i~~~ 225 (391)
...+..|++-.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|+++.|.... .|+.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 457888888777654 23456566666789999999874 24799888888899999998743 5777754
Q ss_pred ceeEEEEeeEEcCCc--------eEEEeecCCCCCCCcEEEEEEEeeEEeCCce-EEEEE----------EecCCCCeeE
Q 041993 226 TSNLWIENVACGPGH--------GISIGSLGKDLNEAGVQNVTVKTVTFTGTQN-GLRIK----------SWGRPSNGFA 286 (391)
Q Consensus 226 ~~nv~i~n~~~~~~~--------gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~-gi~i~----------~~~~~~~g~i 286 (391)
. +.+|+|+.|.... |+.+...........++++.|++++|.++.. ||.+. .-.......-
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p 378 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETP 378 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCC
T ss_pred C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCC
Confidence 4 4499999987542 6666311110112347899999999999987 99887 1111111445
Q ss_pred EEEEEEEEEEecCC
Q 041993 287 RNILFRNAIMKNVQ 300 (391)
Q Consensus 287 ~nI~~~ni~~~~~~ 300 (391)
.|++|.|..+.+..
T Consensus 379 ~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 379 HQLMLKGNLFFKDK 392 (506)
T ss_dssp CSEEEESCEEECCS
T ss_pred CcEEEEccEEEcCC
Confidence 67888887776554
No 74
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.70 E-value=0.84 Score=38.81 Aligned_cols=133 Identities=11% Similarity=0.067 Sum_probs=91.3
Q ss_pred eecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEE
Q 041993 152 NCNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWI 231 (391)
Q Consensus 152 ~~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i 231 (391)
--++.+++|+.|-.....++|.. -+.+|+|+.+..- ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|
T Consensus 50 le~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I 123 (196)
T 3t9g_A 50 LEKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKV 123 (196)
T ss_dssp ECTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEE
T ss_pred EcCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEE
Confidence 35788999999977777888876 4799999999874 34788888777889999988887665554555678888
Q ss_pred EeeEEcCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCC
Q 041993 232 ENVACGPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQ 300 (391)
Q Consensus 232 ~n~~~~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~ 300 (391)
+|.+..+ .|--+-|-|.- ..-+++.++|+++.+....+ +++.. .-..+++.|+++.++.
T Consensus 124 ~nF~~~~-~GKl~RSCGnc---~~~r~v~i~~v~~~n~k~~l-~rtdS-----~~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 124 KNFTATN-IGKLVRQNGNT---TFKVVIYLEDVTLNNVKSCV-AKSDS-----PVSELWYHNLNVNNCK 182 (196)
T ss_dssp EEEEEEE-EEEEEEECTTC---CSCEEEEEEEEEEEEEEEEE-EECCC-----TTCEEEEEEEEEEEEE
T ss_pred eeEEEcc-CCEEEEcCCCC---CceeEEEEeCeEEeCCEEEE-EEcCC-----CCCEEEEecceecCCC
Confidence 8888753 33222233321 23488999999998764443 33322 2345667777776654
No 75
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=95.43 E-value=0.45 Score=40.56 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=38.1
Q ss_pred ecceEEEeEEEecCCceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEE
Q 041993 153 CNNIAINGLTSLNSQMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIE 232 (391)
Q Consensus 153 ~~nv~i~~v~i~n~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~ 232 (391)
-++.+++|+.|-.+...++|-.+ +.+|+|+.+..- ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 120 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIR 120 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEe
Confidence 34566666666544445555543 355666555543 224455554444555555555443333332334445555
Q ss_pred eeEE
Q 041993 233 NVAC 236 (391)
Q Consensus 233 n~~~ 236 (391)
|.+.
T Consensus 121 nF~~ 124 (197)
T 1ee6_A 121 NFRA 124 (197)
T ss_dssp SCEE
T ss_pred eEEE
Confidence 5443
No 76
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.36 E-value=0.11 Score=48.62 Aligned_cols=112 Identities=9% Similarity=0.119 Sum_probs=77.8
Q ss_pred ceeeEEEEeEEEEcCCCC--CCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCC
Q 041993 175 GCNNVKLKGVKVLASGNS--PNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLN 252 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~ 252 (391)
..++++++|++|.+.... .-.-++.+. +.++.++||.|....|.+.... .+ ..+++|++.+.-.+-+|..
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 163 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA----- 163 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-----
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-----
Confidence 478999999999986431 223466664 6899999999999888888876 44 4999999987656666542
Q ss_pred CCcEEEEEEEeeEEeCCc-----eEEEEEEecCCCCeeEEEEEEEEEEEecCC
Q 041993 253 EAGVQNVTVKTVTFTGTQ-----NGLRIKSWGRPSNGFARNILFRNAIMKNVQ 300 (391)
Q Consensus 253 ~~~i~nI~i~n~~~~~~~-----~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~ 300 (391)
...|+||++.... .+ .|-.........-....|.|+++....
T Consensus 164 -----~a~f~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 -----AVVLQDCDIHARRPGSGQKN-MVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp -----EEEEESCEEEECCCSTTCCE-EEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred -----cEEEEeeEEEEecCCCCCce-EEEeCCCCCCCCCceEEEECCEEecCC
Confidence 2778999987532 22 343332212234456899999997654
No 77
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=95.15 E-value=1.5 Score=40.49 Aligned_cols=16 Identities=25% Similarity=0.520 Sum_probs=11.9
Q ss_pred eeEEeceeEeCCCccc
Q 041993 116 GVTLNSGILDGQGTAL 131 (391)
Q Consensus 116 ni~I~GG~idg~g~~~ 131 (391)
.-+|.|.++||.+..|
T Consensus 124 ~~~i~g~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFENRTVDCGGVTI 139 (344)
T ss_dssp TEEEESSEEECTTCEE
T ss_pred ceeEecceEcCCCcEE
Confidence 3467788899988764
No 78
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=94.98 E-value=0.11 Score=48.46 Aligned_cols=112 Identities=10% Similarity=0.102 Sum_probs=77.9
Q ss_pred ceeeEEEEeEEEEcCCCC--CCCCceeeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEcCCceEEEeecCCCCC
Q 041993 175 GCNNVKLKGVKVLASGNS--PNTDGIHVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDLN 252 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~~~~gi~igs~g~~~~ 252 (391)
.+++++++|++|.+.... .-.-++.+. +.++.++||.|....|.+.... .++ .+++|++.+.-.+-+|..
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~-~r~-~~~~c~I~G~vDFIfG~~----- 159 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHS-QRQ-FYRDSYVTGTVDFIFGNA----- 159 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECS-SEE-EEESCEEEESSSCEEECC-----
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecC-ccE-EEEeeEEEeceeEEcCCc-----
Confidence 578999999999986431 223466664 5899999999999888888876 444 899999987666666542
Q ss_pred CCcEEEEEEEeeEEeCCc-----eEEEEEEecCCCCeeEEEEEEEEEEEecCC
Q 041993 253 EAGVQNVTVKTVTFTGTQ-----NGLRIKSWGRPSNGFARNILFRNAIMKNVQ 300 (391)
Q Consensus 253 ~~~i~nI~i~n~~~~~~~-----~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~ 300 (391)
...|+||.+.... .+ .|-.........-....|.|+++....
T Consensus 160 -----~avf~~c~i~~~~~~~~~~~-~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 -----AVVFQKCQLVARKPGKYQQN-MVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp -----EEEEESCEEEECCCSTTCCE-EEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred -----eEEEeeeEEEEeccCCCCcc-EEEecCcCCCCCCcEEEEECCEEecCC
Confidence 2778999987532 22 333332212234456899999997644
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=92.29 E-value=1.7 Score=40.87 Aligned_cols=110 Identities=4% Similarity=0.043 Sum_probs=74.7
Q ss_pred ceeeEEEEeEEEEcCCC--------------CCCCC--ce--eeeccccEEEEeeEEecCCceEEeCCCceeEEEEeeEE
Q 041993 175 GCNNVKLKGVKVLASGN--------------SPNTD--GI--HVQLSSDVTILNTRISTGDDCVSIGPGTSNLWIENVAC 236 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~--------------~~~~D--Gi--~~~~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~ 236 (391)
.+++++++|++|.+... ..... ++ .+ .+.++.+++|.|....|.+.... ....++||++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v-~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I 170 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK-SGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRI 170 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT-TCBSEEEEEEEEECSTTCEEECS--SEEEEESCEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee-ccCcEEEEeeEEecccceEEECC--CCEEEEcCEE
Confidence 47899999999998641 01122 44 33 36899999999999888888875 4689999999
Q ss_pred cCCceEEEeecCCCCCCCcEEEEEEEeeEEeCCce---------EEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 237 GPGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQN---------GLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 237 ~~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~---------gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
.+.-.+=+|.. ...|++|.+.-... | .|..... ....-..+.|.|+++...
T Consensus 171 ~G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g-~ItA~~~-~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 171 SGTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSG-YLTAPST-NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCE-EEEEECC-BTTCSCCEEEESCEEEES
T ss_pred EeceEEEeCCc----------eEEEecCEEEEecCcccccccCce-EEEccCC-CCCCCCEEEEEcCEEecC
Confidence 87777767653 37788998864321 3 3332211 112233488999999765
No 80
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=92.20 E-value=2.7 Score=35.82 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=65.0
Q ss_pred eeEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEec-CCceEEeCCCceeEEEEeeEEcCCce--EEEeecCCCCCC
Q 041993 177 NNVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRIST-GDDCVSIGPGTSNLWIENVACGPGHG--ISIGSLGKDLNE 253 (391)
Q Consensus 177 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~nv~i~n~~~~~~~g--i~igs~g~~~~~ 253 (391)
+..+++|+.|-. ...||||... +-+++|+.++. +.|++.+++ ...++|.+.-..++.. |.. .
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~--N------ 112 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQI--N------ 112 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEE--C------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEe--c------
Confidence 468899999965 3569999975 58999999987 889999986 5556666555544332 332 1
Q ss_pred CcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecCCcc
Q 041993 254 AGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNVQNP 302 (391)
Q Consensus 254 ~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~~~~ 302 (391)
+--.+.|+|.++.+ .|=...+... -..-++|.++|+++.+....
T Consensus 113 -g~Gtv~I~nF~~~~--~GKl~RScGn--c~~~r~v~i~~v~~~~~k~~ 156 (197)
T 1ee6_A 113 -AAGTINIRNFRADD--IGKLVRQNGG--TTYKVVMNVENCNISRVKDA 156 (197)
T ss_dssp -SSEEEEEESCEEEE--EEEEEEECTT--CCSCEEEEEESCEEEEEEEE
T ss_pred -CCceEEEeeEEEcc--CCEEEEcCCC--CccceEEEEeceEEECceEE
Confidence 11236666655542 2323333321 11236777777777665443
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.71 E-value=1.6 Score=41.37 Aligned_cols=113 Identities=8% Similarity=0.038 Sum_probs=77.1
Q ss_pred ceeeEEEEeEEEEcCCC----------------CCCCCceeee-ccccEEEEeeEEecCCceEEeCCCceeEEEEeeEEc
Q 041993 175 GCNNVKLKGVKVLASGN----------------SPNTDGIHVQ-LSSDVTILNTRISTGDDCVSIGPGTSNLWIENVACG 237 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~----------------~~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~i~~~~~nv~i~n~~~~ 237 (391)
.+++++++|++|.+... ..-.-++.+. ...+..+.+|.|....|.+.... .....+++|+|.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 56899999999988642 0112245554 36889999999999888888873 468899999998
Q ss_pred CCceEEEeecCCCCCCCcEEEEEEEeeEEeCCc------eEEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 238 PGHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQ------NGLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 238 ~~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~------~gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
+.-.+=+|.. ...|+||++.-.. .+-.|..... ....-..+.|.|+++...
T Consensus 199 GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 199 GHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEEEC
T ss_pred cCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEecC
Confidence 8777777652 3678899886431 1123433322 222234589999999864
No 82
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=91.13 E-value=7.1 Score=36.32 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=39.2
Q ss_pred ceeEEEEeeEEcCC--ceEEEeecCC------CC---------CCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEE
Q 041993 226 TSNLWIENVACGPG--HGISIGSLGK------DL---------NEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARN 288 (391)
Q Consensus 226 ~~nv~i~n~~~~~~--~gi~igs~g~------~~---------~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 288 (391)
+.|+.+|+...-.. +|+.+|+... ++ ...-..|=.|.|..+.++ -|+.+... + .+++++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57899999887543 4788877421 11 111124567778777776 34444433 2 4567777
Q ss_pred EEEEEEE
Q 041993 289 ILFRNAI 295 (391)
Q Consensus 289 I~~~ni~ 295 (391)
|+++++.
T Consensus 346 itv~DCA 352 (559)
T 2vfm_A 346 ITVEDCA 352 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 6666553
No 83
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=90.91 E-value=6.7 Score=36.51 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=38.8
Q ss_pred ceeEEEEeeEEcCC--ceEEEeecCC------CC---------CCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEE
Q 041993 226 TSNLWIENVACGPG--HGISIGSLGK------DL---------NEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARN 288 (391)
Q Consensus 226 ~~nv~i~n~~~~~~--~gi~igs~g~------~~---------~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 288 (391)
+.|+.+|+...-.. +|+.+|+... ++ ...-..|=.|.|..+.++ -|+.+... + .+++++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-G-SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57899999887543 4787776421 11 111124567778877776 34444433 2 4567777
Q ss_pred EEEEEEE
Q 041993 289 ILFRNAI 295 (391)
Q Consensus 289 I~~~ni~ 295 (391)
|+++++.
T Consensus 349 itv~DCA 355 (559)
T 2v5i_A 349 VTVQDCA 355 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 6666543
No 84
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=89.08 E-value=10 Score=36.75 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=39.2
Q ss_pred ceeEEEEeeEEcCC--ceEEEeecCC------CC---------CCCcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEE
Q 041993 226 TSNLWIENVACGPG--HGISIGSLGK------DL---------NEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARN 288 (391)
Q Consensus 226 ~~nv~i~n~~~~~~--~gi~igs~g~------~~---------~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 288 (391)
+.|+.+|+...-.. +|+.+|+... ++ ...-..|=.|+|..+.++ -|+.+... + .+++++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g-~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 57899999887543 4788877421 11 011124567778877776 34444433 2 4567777
Q ss_pred EEEEEEE
Q 041993 289 ILFRNAI 295 (391)
Q Consensus 289 I~~~ni~ 295 (391)
|++++|.
T Consensus 453 itv~dca 459 (666)
T 2xc1_A 453 ITVEDCA 459 (666)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 6666653
No 85
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=81.90 E-value=12 Score=35.98 Aligned_cols=124 Identities=11% Similarity=0.076 Sum_probs=78.9
Q ss_pred ceeeEEEEeEEEEcCCCC----CCCC--ceeeeccccEEEEeeEEecCCceEEeCC----------CceeEEEEeeEEcC
Q 041993 175 GCNNVKLKGVKVLASGNS----PNTD--GIHVQLSSDVTILNTRISTGDDCVSIGP----------GTSNLWIENVACGP 238 (391)
Q Consensus 175 ~~~nv~i~n~~i~~~~~~----~~~D--Gi~~~~s~nv~I~n~~i~~~dD~i~i~~----------~~~nv~i~n~~~~~ 238 (391)
..++++++|++|.+.... .... .+.+. ..+..+.+|.|....|-+.... ....-.+++|+|.+
T Consensus 199 ~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~-gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG 277 (422)
T 3grh_A 199 QNNGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG 277 (422)
T ss_dssp CCTTCEEEEEEEEETTGGGSCSSCCCCCSEEEC-CSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE
T ss_pred ECCCEEEEeeEEEeCCCCCCCCCCCceEEEEec-CCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEec
Confidence 457899999999885321 1122 33443 5889999999999888887742 24578899999988
Q ss_pred CceEEEeecCCCCCCCcEEEEEEEeeEEeCCce----EEEEEEecCCCCeeEEEEEEEEEEEecCC-ccEEEEeeeC
Q 041993 239 GHGISIGSLGKDLNEAGVQNVTVKTVTFTGTQN----GLRIKSWGRPSNGFARNILFRNAIMKNVQ-NPIIIDQNYC 310 (391)
Q Consensus 239 ~~gi~igs~g~~~~~~~i~nI~i~n~~~~~~~~----gi~i~~~~~~~~g~i~nI~~~ni~~~~~~-~~i~i~~~~~ 310 (391)
.-.+=+|.. ...|++|++.-... +-.|..... ....-..++|.|+++.... ....+..-|.
T Consensus 278 tVDFIFG~a----------~AvFe~C~I~s~~~~~~~~g~ITA~~t-~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~ 343 (422)
T 3grh_A 278 DVDIVSGRG----------AVVFDNTEFRVVNSRTQQEAYVFAPAT-LSNIYYGFLAVNSRFNAFGDGVAQLGRSLD 343 (422)
T ss_dssp SEEEEEESS----------EEEEESCEEEECCSSCSSCCEEEEECC-BTTCCCCEEEESCEEEECSSSCBEEEEEEC
T ss_pred cccEEccCc----------eEEEEeeEEEEecCCCCCceEEEecCC-CCCCCCEEEEECCEEEeCCCCCEEcCCCCC
Confidence 777777642 36788888874321 123332211 1223355899999998532 3344544444
No 86
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=79.98 E-value=0.72 Score=44.09 Aligned_cols=38 Identities=32% Similarity=0.345 Sum_probs=26.5
Q ss_pred CCccCCCCcccHHHHHHHHHHHcCCCCCcEEEEcCC-eEEEee
Q 041993 32 FGAKPDGRTDSTKAFLSAWANACGSPRAATIYVPPG-RFFLRN 73 (391)
Q Consensus 32 ~Ga~~dg~~d~t~aiq~Ai~~a~~~~~g~~v~ip~G-~Y~~~~ 73 (391)
=||++||++|||+|+.+||+++ + ++.++=-.| ||.+.+
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~-~~~~IDG~G~T~kVs~ 42 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---P-VGQKINGNGKTYKVTS 42 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---C-TTSCEECTTCEEECSS
T ss_pred CcccCCCccCcHHHHHHHhccC---C-CCeEEeCCCceEEeee
Confidence 4799999999999999999754 2 233333344 566543
No 87
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=77.69 E-value=50 Score=31.44 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=37.6
Q ss_pred ceeEEEEeeEEcCC--ceEEEeecCCCC----CC---------CcEEEEEEEeeEEeCCceEEEEEEecCCCCeeEEEEE
Q 041993 226 TSNLWIENVACGPG--HGISIGSLGKDL----NE---------AGVQNVTVKTVTFTGTQNGLRIKSWGRPSNGFARNIL 290 (391)
Q Consensus 226 ~~nv~i~n~~~~~~--~gi~igs~g~~~----~~---------~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~ 290 (391)
+.|+.+++...-.. +|+-+++....+ .+ .-..|=.|+|+...++ .|+.+... + .+++++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~~D-G-~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAWWD-G-QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSEEC-S-SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeeeec-C-CCCeEeeEE
Confidence 57888888886554 477776622211 00 1124556677777665 23322211 2 567788777
Q ss_pred EEEEEE
Q 041993 291 FRNAIM 296 (391)
Q Consensus 291 ~~ni~~ 296 (391)
++++.-
T Consensus 339 ~~dcag 344 (543)
T 3riq_A 339 TYEAHK 344 (543)
T ss_dssp EESCSS
T ss_pred eecccc
Confidence 665443
No 88
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=74.78 E-value=24 Score=32.83 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=52.4
Q ss_pred cccEEEEeeEEec-CCceEEeCCC-----------------------ceeEEEEeeEEcCCceEEEeecCCCCCCCcEEE
Q 041993 203 SSDVTILNTRIST-GDDCVSIGPG-----------------------TSNLWIENVACGPGHGISIGSLGKDLNEAGVQN 258 (391)
Q Consensus 203 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~n 258 (391)
+-|..+++..... --|++.+++. -.|-+|.|..+.++-|+.+|-.|+ .+++.|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 3556777766654 3577777763 258889999998887777765542 346888
Q ss_pred EEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 259 VTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 259 I~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
|+++||- ..|..+..+. -+|.||++-++
T Consensus 346 itv~DCA----GsG~~~~t~~---------~~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDCA----GSGAYLLTHE---------SVFTNIAIIDT 373 (559)
T ss_dssp EEEESCS----SEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhcc----CcceEEeecc---------ceeeeeEEEec
Confidence 8888774 2455555442 35666666544
No 89
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=73.54 E-value=38 Score=31.32 Aligned_cols=52 Identities=17% Similarity=0.099 Sum_probs=33.2
Q ss_pred eEEEEeEEEEcCCCCCCCCceeeeccccEEEEeeEEec-CCceEEeCCCceeEEEEeeEE
Q 041993 178 NVKLKGVKVLASGNSPNTDGIHVQLSSDVTILNTRIST-GDDCVSIGPGTSNLWIENVAC 236 (391)
Q Consensus 178 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~~~nv~i~n~~~ 236 (391)
..+++|+.|-. ...||||... -+-+|+|+.++. +.|++.++. ..++|.+.-.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA 211 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG--KTMTIVGGIA 211 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS--SEEEEESCEE
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC--ceEEEECchh
Confidence 45677776643 3567888872 257788887776 778888884 2455544433
No 90
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=71.94 E-value=23 Score=33.02 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=52.6
Q ss_pred cccEEEEeeEEec-CCceEEeCCC-----------------------ceeEEEEeeEEcCCceEEEeecCCCCCCCcEEE
Q 041993 203 SSDVTILNTRIST-GDDCVSIGPG-----------------------TSNLWIENVACGPGHGISIGSLGKDLNEAGVQN 258 (391)
Q Consensus 203 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~n 258 (391)
+-|..+++..... --|++.+++. -.|-.|.|..+.++-|+.+|-.|+ .+++.|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 3566777766654 3577777763 258889999998887777765542 346888
Q ss_pred EEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 259 VTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 259 I~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
|+++||- ..|..+..+. -+|.||++-++
T Consensus 349 itv~DCA----GsG~~~~t~~---------~~FtNi~vID~ 376 (559)
T 2v5i_A 349 VTVQDCA----GAGMLAHTYN---------RVFSNITVIDC 376 (559)
T ss_dssp EEEESCS----SEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhcc----CcceEEeecc---------ceeeeeEEEec
Confidence 8888774 2455555442 35666666554
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=68.95 E-value=35 Score=33.09 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=52.8
Q ss_pred cccEEEEeeEEec-CCceEEeCCC-----------------------ceeEEEEeeEEcCCceEEEeecCCCCCCCcEEE
Q 041993 203 SSDVTILNTRIST-GDDCVSIGPG-----------------------TSNLWIENVACGPGHGISIGSLGKDLNEAGVQN 258 (391)
Q Consensus 203 s~nv~I~n~~i~~-~dD~i~i~~~-----------------------~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~n 258 (391)
+-|..+++..... --|++.+++. -.|-+|.|..+.++-|+.+|-.| ..+++.|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 4566777776654 4677888774 25888999999888777776554 2346888
Q ss_pred EEEEeeEEeCCceEEEEEEecCCCCeeEEEEEEEEEEEecC
Q 041993 259 VTVKTVTFTGTQNGLRIKSWGRPSNGFARNILFRNAIMKNV 299 (391)
Q Consensus 259 I~i~n~~~~~~~~gi~i~~~~~~~~g~i~nI~~~ni~~~~~ 299 (391)
|+++||- ..|..+..+. -+|.||++-++
T Consensus 453 itv~dca----g~g~~~~~~~---------~~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDCA----GSGAYLLTHE---------SVFTNIAIIDT 480 (666)
T ss_dssp EEEESCS----SEEEEEEEES---------CEEEEEEEESC
T ss_pred eEehhcc----CcceEEeecc---------ceeeeeEEEec
Confidence 8888774 2455555442 35666666544
No 92
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=65.40 E-value=44 Score=31.77 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=41.0
Q ss_pred cccEEEEeeEEec-CCceEEeCCC---------------------ceeEEEEeeEEcCCceEEEeecCCCCCCCcEEEEE
Q 041993 203 SSDVTILNTRIST-GDDCVSIGPG---------------------TSNLWIENVACGPGHGISIGSLGKDLNEAGVQNVT 260 (391)
Q Consensus 203 s~nv~I~n~~i~~-~dD~i~i~~~---------------------~~nv~i~n~~~~~~~gi~igs~g~~~~~~~i~nI~ 260 (391)
+-|..++|..... --|++.++++ -.|-.|+|+....+.|+.++-.| ..+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 4566677765543 4677888763 25788899998888887776554 234677777
Q ss_pred EEeeE
Q 041993 261 VKTVT 265 (391)
Q Consensus 261 i~n~~ 265 (391)
+++|.
T Consensus 339 ~~dca 343 (543)
T 3riq_A 339 TYEAH 343 (543)
T ss_dssp EESCS
T ss_pred eeccc
Confidence 76664
No 93
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.87 E-value=38 Score=28.36 Aligned_cols=11 Identities=9% Similarity=0.522 Sum_probs=6.7
Q ss_pred EEEEeecceEE
Q 041993 148 MGFSNCNNIAI 158 (391)
Q Consensus 148 i~~~~~~nv~i 158 (391)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 55666666555
No 94
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=20.86 E-value=4.8e+02 Score=23.76 Aligned_cols=145 Identities=19% Similarity=0.189 Sum_probs=79.7
Q ss_pred eeEEEEeecceEEEeEEEe-----cC-CceeEEEeceeeEEEEeEEEEcCCCCCCCCceeeec------cccEEEEeeEE
Q 041993 146 TSMGFSNCNNIAINGLTSL-----NS-QMYHVVFNGCNNVKLKGVKVLASGNSPNTDGIHVQL------SSDVTILNTRI 213 (391)
Q Consensus 146 ~~i~~~~~~nv~i~~v~i~-----n~-~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i 213 (391)
..+.|..-+.-.++++++. ++ ..+.+.+.+..+|+++|+.+.+.. .-|+.+.. -....|++.+-
T Consensus 129 n~lvfn~p~~g~ls~~ti~~nk~~ds~qg~qvs~~gg~dvsv~~i~fsn~~----g~gfsliayp~~~~p~g~~i~~irg 204 (542)
T 2x3h_A 129 NYLVFNNPRTGRLSNITVESNKATDTTQGQQVSLAGGSDVTVSDVNFSNVK----GTGFSLIAYPNDAPPDGLMIKGIRG 204 (542)
T ss_dssp CCEEEESCEEEEEEEEEEECCCSSTTCBCCSEEEESCEEEEEEEEEEEEEC----SBEEEEEEECSSSCCBSCEEEEEEE
T ss_pred CEEEEeCCCCcceeeEEEecccCCccccceEEEecCCCcceEeeeeeeecC----CCceeEEEcCCCCCCCceEEecccc
Confidence 3456666666666666664 33 245688999999999999998732 12333211 23344555443
Q ss_pred e-----c--CCceEEeCCCceeEEEEeeEEcC--Cce-EEEeecCCCCCCCcEEEEEEEeeEEeCCceEEEEEEecCCCC
Q 041993 214 S-----T--GDDCVSIGPGTSNLWIENVACGP--GHG-ISIGSLGKDLNEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSN 283 (391)
Q Consensus 214 ~-----~--~dD~i~i~~~~~nv~i~n~~~~~--~~g-i~igs~g~~~~~~~i~nI~i~n~~~~~~~~gi~i~~~~~~~~ 283 (391)
. + ...|+-..+ +.|-+|.+....+ .-| +.++....+ .-+.||.=++| ++-.+=. .+..
T Consensus 205 ~y~g~a~nk~agcvl~ds-s~nslid~via~nypqfgavelk~~a~y---nivsnvig~~c-----qhv~yng---te~~ 272 (542)
T 2x3h_A 205 SYSGYATNKAAGCVLADS-SVNSLIDNVIAKNYPQFGAVELKGTASY---NIVSNVIGADC-----QHVTYNG---TEGP 272 (542)
T ss_dssp EECSCCTTCSEEEEEEES-CBSCEEEEEEEESCCTTEEEEEETTCBS---CEEEEEEEESC-----SEEEEEE---CSSS
T ss_pred ceeccccccccceEEecc-chhhhhhhhhhhcCCccceEEeecceee---ehhhhhhhccc-----eeEEECC---ccCC
Confidence 2 1 135555555 7888888887764 334 777654322 23455544444 3222111 1122
Q ss_pred eeEEEEEEEEEEEecCCccEEEE
Q 041993 284 GFARNILFRNAIMKNVQNPIIID 306 (391)
Q Consensus 284 g~i~nI~~~ni~~~~~~~~i~i~ 306 (391)
-.-.|-.++.+-..+.+++..+-
T Consensus 273 ~apsnn~i~~vmannpkyaavv~ 295 (542)
T 2x3h_A 273 IAPSNNLIKGVMANNPKYAAVVA 295 (542)
T ss_dssp CCCCSCEEEEEEEESCSSEEEEC
T ss_pred cCCccchhhHhhcCCCceEEEEE
Confidence 23455556666666666665554
No 95
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=20.12 E-value=1.5e+02 Score=27.64 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=4.6
Q ss_pred EEEEeecceEE
Q 041993 148 MGFSNCNNIAI 158 (391)
Q Consensus 148 i~~~~~~nv~i 158 (391)
+++.+|+|++|
T Consensus 102 v~I~~C~n~~i 112 (352)
T 3bh7_B 102 VFFRNCRDCKC 112 (352)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEcCCCcEE
Confidence 34444444333
Done!