Your job contains 1 sequence.
>042003
LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS
RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV
RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL
AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS
GAAYIHRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042003
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075034 - symbol:AT3G09720 species:3702 "Arabi... 935 6.1e-94 1
DICTYBASE|DDB_G0274325 - symbol:ddx52 "DEAD/DEAH box heli... 598 3.2e-58 1
SGD|S000003139 - symbol:ROK1 "RNA-dependent ATPase" speci... 554 1.5e-53 1
ZFIN|ZDB-GENE-060623-1 - symbol:ddx52 "DEAD (Asp-Glu-Ala-... 550 3.8e-53 1
UNIPROTKB|A5D7C1 - symbol:DDX52 "Probable ATP-dependent R... 542 2.7e-52 1
RGD|621743 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box pol... 539 5.6e-52 1
UNIPROTKB|I3LJA0 - symbol:DDX52 "Uncharacterized protein"... 537 9.2e-52 1
MGI|MGI:1925644 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) bo... 537 9.2e-52 1
UNIPROTKB|E2RB54 - symbol:DDX52 "Uncharacterized protein"... 535 1.5e-51 1
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R... 531 4.0e-51 1
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R... 531 4.0e-51 1
UNIPROTKB|J9P4L6 - symbol:DDX52 "Uncharacterized protein"... 529 6.5e-51 1
UNIPROTKB|E1C4M1 - symbol:DDX52 "Uncharacterized protein"... 526 1.3e-50 1
UNIPROTKB|F1NQA6 - symbol:DDX52 "Uncharacterized protein"... 526 1.3e-50 1
POMBASE|SPAC22F3.08c - symbol:rok1 "ATP-dependent RNA hel... 524 2.2e-50 1
FB|FBgn0036754 - symbol:CG5589 species:7227 "Drosophila m... 518 9.5e-50 1
WB|WBGene00011032 - symbol:R05D11.4 species:6239 "Caenorh... 365 4.0e-33 1
ASPGD|ASPL0000058969 - symbol:AN0944 species:162425 "Emer... 324 3.0e-31 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 338 4.9e-30 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 332 2.5e-29 1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 332 2.6e-29 1
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel... 322 5.6e-29 1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he... 322 5.6e-29 1
UNIPROTKB|Q9KLH6 - symbol:VC_A0768 "ATP-dependent RNA hel... 320 9.1e-29 1
TIGR_CMR|VC_A0768 - symbol:VC_A0768 "ATP-dependent RNA he... 320 9.1e-29 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 325 1.9e-28 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 322 2.1e-28 1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 322 3.0e-28 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 318 3.1e-28 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 320 3.2e-28 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 322 3.2e-28 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 321 3.3e-28 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 322 4.7e-28 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 322 5.4e-28 1
TIGR_CMR|CPS_1590 - symbol:CPS_1590 "ATP-dependent RNA he... 312 6.4e-28 1
UNIPROTKB|Q8EGU0 - symbol:SO_1501 "ATP-dependent RNA heli... 311 8.3e-28 1
TIGR_CMR|SO_1501 - symbol:SO_1501 "ATP-dependent RNA heli... 311 8.3e-28 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 310 1.0e-27 1
UNIPROTKB|Q8EE19 - symbol:SO_2571 "ATP-dependent RNA heli... 311 1.3e-27 1
TIGR_CMR|SO_2571 - symbol:SO_2571 "ATP-dependent RNA heli... 311 1.3e-27 1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 308 1.7e-27 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 311 2.6e-27 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 311 2.6e-27 1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 308 5.3e-27 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 308 9.7e-27 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 303 1.5e-26 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 307 1.6e-26 1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 307 1.6e-26 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 306 2.6e-26 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 305 2.6e-26 1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 305 2.6e-26 1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 305 2.6e-26 1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 305 2.6e-26 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 305 2.7e-26 1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 305 2.7e-26 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 302 3.0e-26 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 305 3.1e-26 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 304 3.5e-26 1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas... 295 4.0e-26 1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he... 295 4.0e-26 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 303 4.3e-26 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 302 5.5e-26 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 302 5.5e-26 1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 302 5.5e-26 1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 301 6.4e-26 1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 301 6.4e-26 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 301 6.4e-26 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 301 7.0e-26 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 301 7.1e-26 1
UNIPROTKB|P0A8J8 - symbol:rhlB "RhlB" species:83333 "Esch... 292 8.4e-26 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 299 1.1e-25 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 299 1.1e-25 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 299 1.1e-25 1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 299 1.2e-25 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 299 1.3e-25 1
UNIPROTKB|Q8EJQ5 - symbol:rhlB "ATP-dependent RNA helicas... 291 1.4e-25 1
TIGR_CMR|SO_0407 - symbol:SO_0407 "ATP-dependent RNA heli... 291 1.4e-25 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 299 1.5e-25 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 299 1.5e-25 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 299 1.5e-25 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 299 1.5e-25 1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 290 1.6e-25 1
FB|FBgn0015331 - symbol:abs "abstrakt" species:7227 "Dros... 297 1.6e-25 1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 296 2.9e-25 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 294 3.0e-25 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 294 3.4e-25 1
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"... 286 3.6e-25 1
UNIPROTKB|Q9KV52 - symbol:rhlB "ATP-dependent RNA helicas... 287 4.1e-25 1
TIGR_CMR|VC_0305 - symbol:VC_0305 "ATP-dependent RNA heli... 287 4.1e-25 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 286 4.6e-25 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 286 4.6e-25 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 296 5.2e-25 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 296 5.6e-25 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 243 5.6e-25 2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 243 5.7e-25 2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 243 5.7e-25 2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 243 5.7e-25 2
UNIPROTKB|Q8EBV7 - symbol:SO_3388 "ATP-dependent RNA heli... 284 5.9e-25 1
TIGR_CMR|SO_3388 - symbol:SO_3388 "ATP-dependent RNA heli... 284 5.9e-25 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 293 6.0e-25 1
WARNING: Descriptions of 706 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 190/248 (76%), Positives = 207/248 (83%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXS 60
LA QT RE KKL KG+ F I+LM K LV++ D SK CD+LISTP S
Sbjct: 222 LAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLS 281
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VEYLVLDE+DKLFE +LLK ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAV
Sbjct: 282 KVEYLVLDESDKLFEQ-SLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAV 340
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKNTASE++KQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 341 RVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDEL 400
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ IRAGVIHSDL +RENAVD FRAG+ WVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 401 KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDS 460
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 461 ASAYIHRI 468
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 126/250 (50%), Positives = 168/250 (67%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-RSTDLSKF-SCDILISTPXXXXXXXXXXXXX 58
LA Q R + L+KG F+I ++ K L +ST+ + + DILI+TP
Sbjct: 280 LAQQIYRNFRLLSKGKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLS 339
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
++VEYLV DEADKLF+ N + +D VV AC NP + LFSAT+ VEEL SIM +
Sbjct: 340 LNKVEYLVFDEADKLFDK-NFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKN 398
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+++I+G +N A+ ++ QKL++ G EEGKLLA+RQ + L PP+LIF QSKERA +L+
Sbjct: 399 PIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQ 458
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FDGI VIHS+ +Q QR+ V FR GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 459 ELIFDGINVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFP 518
Query: 239 DSGAAYIHRI 248
+ A+YIHRI
Sbjct: 519 HTLASYIHRI 528
>SGD|S000003139 [details] [associations]
symbol:ROK1 "RNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
Length = 564
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 117/258 (45%), Positives = 165/258 (63%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPXXXXXX 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTP
Sbjct: 204 LANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 XXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
S+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFDK-TFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P S AY+HRI
Sbjct: 443 LVINYDVPGSSQAYVHRI 460
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 119/257 (46%), Positives = 165/257 (64%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRS---TDLSKFSCDILISTPXXXXXXXXXX 55
LATQT RE KL++G F++ ++ K E V+ KF DIL++TP
Sbjct: 248 LATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKF--DILVTTPNRLIYLLNQD 305
Query: 56 --XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
S VE+LV+DE+DKLFE G + + + ACS+P++ R LFSAT VE
Sbjct: 306 PPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERW 365
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+ + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R + PPVL+FVQS +
Sbjct: 366 CKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVLVFVQSID 425
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RA+ELY EL ++GI VIH+D +Q QR+N V FR+GK WVLI T ++ARG+DFKG+N
Sbjct: 426 RARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINL 485
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S YIHRI
Sbjct: 486 VINYDFPTSAVEYIHRI 502
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 118/255 (46%), Positives = 161/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE KL++G F+I ++ K V + S DIL++TP
Sbjct: 244 LASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ R
Sbjct: 304 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCR 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V VG +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 364 LNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 115/255 (45%), Positives = 163/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE K+++G F+I ++ K + + S DIL++TP
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 115/255 (45%), Positives = 162/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE K+++G F+I ++ K V + S DIL++TP
Sbjct: 154 LASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 213
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 214 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 273
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 274 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 333
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 334 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 393
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 394 NYDFPTSSVEYIHRI 408
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 114/255 (44%), Positives = 163/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE K+++G F+I ++ K + + S DIL++TP
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 115/255 (45%), Positives = 161/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA Q RE K+++G F+I ++ K V + S DIL++TP
Sbjct: 248 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 307
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 308 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 367
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 368 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 427
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 428 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 487
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 488 NYDFPTSSVEYIHRI 502
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 114/255 (44%), Positives = 162/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE K+++G F+I ++ K V + S DIL++TP
Sbjct: 138 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 197
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 198 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 257
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 258 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 317
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 318 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 377
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 378 NYDFPTSSVEYIHRI 392
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 114/255 (44%), Positives = 162/255 (63%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA+Q RE K+++G F+I ++ K V + S DIL++TP
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 114/255 (44%), Positives = 160/255 (62%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPXXXXXXXXXX-- 55
LA Q RE K+++G F+I ++ K V + S DIL++TP
Sbjct: 245 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 304
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R++FSA VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAIFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 118/256 (46%), Positives = 160/256 (62%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRS--TDLSKFSCDILISTPXXXXXXXXXX- 55
LA+QT RE KLA G F+I +++K E + S+ DIL++TP
Sbjct: 240 LASQTHRELVKLADGTGFRIHMIQKASEAAKKFGPKSSRKFVDILVTTPNRLIYLLKQDP 299
Query: 56 -XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+ VE+LV+DE+DKLFE G + + AC++ + R+ FSAT VEE
Sbjct: 300 PAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWC 359
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + V V VG +N+A+E+++Q+L+F GSE GKL A+R+ + PPVL+FVQS ER
Sbjct: 360 KLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIER 419
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AKEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN V
Sbjct: 420 AKELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMV 479
Query: 233 INYDFPDSGAAYIHRI 248
INYD P S YIHRI
Sbjct: 480 INYDLPTSAVEYIHRI 495
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 118/255 (46%), Positives = 159/255 (62%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTD-LSKFSCDILISTPXXXXXXXXXX-- 55
LA+QT RE KLA G F+I +++K E + S DIL++TP
Sbjct: 240 LASQTHRELVKLADGTGFRIHMIQKASEAAKKFGPKSSRKFDILVTTPNRLIYLLKQDPP 299
Query: 56 XXXXSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ VE+LV+DE+DKLFE G + + AC++ + R+ FSAT VEE +
Sbjct: 300 AIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCK 359
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V V VG +N+A+E+++Q+L+F GSE GKL A+R+ + PPVL+FVQS ERA
Sbjct: 360 LNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA 419
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 420 KELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVI 479
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S YIHRI
Sbjct: 480 NYDLPTSAVEYIHRI 494
>POMBASE|SPAC22F3.08c [details] [associations]
symbol:rok1 "ATP-dependent RNA helicase Rok1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
NextBio:20802875 Uniprot:Q09775
Length = 481
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 114/252 (45%), Positives = 160/252 (63%)
Query: 1 LATQTTRECKKLAKGNKFQI-KLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXXX 57
L Q R+ +KL+ G +I +L K +++ + D+ I TP
Sbjct: 127 LCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTGLS 186
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
+VE+ V+DEAD+LFE G ++ D ++ AC++ +I +SLFSAT+P VEELA+ +
Sbjct: 187 F-EKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTV 244
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +R+IVG K+ A++SI Q+L+F GS+ K++ LRQ + L P V+IFVQ ERAK L
Sbjct: 245 DPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKAL 304
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y EL FD I GVIH +L Q +RE A+ FR G+ WVLIATD++ARG+DF GV VIN+D
Sbjct: 305 YTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
Query: 237 FPDSGAAYIHRI 248
FP S +YIHRI
Sbjct: 365 FPQSVHSYIHRI 376
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 115/255 (45%), Positives = 157/255 (61%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLS-KFSCDILISTPXXXXXXXXXX-- 55
LA Q REC +L + + + K E + K DIL+STP
Sbjct: 200 LAQQIYRECAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPP 259
Query: 56 XXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
S VE+ VLDEAD+L E G N + +D + ACSNP+ + FSAT V + A
Sbjct: 260 LLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWAL 319
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKERA
Sbjct: 320 RHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKERA 379
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
K+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN VI
Sbjct: 380 KQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVI 439
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP + +YIHRI
Sbjct: 440 NYDFPPTTISYIHRI 454
>WB|WBGene00011032 [details] [associations]
symbol:R05D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG EMBL:Z75546 PIR:T23922 RefSeq:NP_492326.1
ProteinModelPortal:Q21736 SMR:Q21736 STRING:Q21736 PaxDb:Q21736
EnsemblMetazoa:R05D11.4.1 EnsemblMetazoa:R05D11.4.2 GeneID:172651
KEGG:cel:CELE_R05D11.4 UCSC:R05D11.4 CTD:172651 WormBase:R05D11.4
InParanoid:Q21736 NextBio:876429 Uniprot:Q21736
Length = 581
Score = 365 (133.5 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 91/255 (35%), Positives = 133/255 (52%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXS 60
LA QT E K E TD+ DIL+STP S
Sbjct: 216 LAAQTYTEFLKYCANTSISAANFSGE---ETDIQH--ADILVSTPNRIVFHLDKIDT--S 268
Query: 61 RVEYLVLDEADKLFEV--GN---LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+ +LV+DE+D+LFEV G + + KAC + FSAT VE+ +
Sbjct: 269 SLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEVEKWCKEN 328
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ + V VG +N+++ S+KQKL + G+E+GK +A+R S PP L+FVQSK+RA +
Sbjct: 329 IDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAVQ 388
Query: 176 LYGEL-AFDG-IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L A D ++ I+S S +R+ ++ FR G+ WVL+ T+++ RG+D V VI
Sbjct: 389 LVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVI 448
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S +YIHR+
Sbjct: 449 NYDLPTSIVSYIHRV 463
>ASPGD|ASPL0000058969 [details] [associations]
symbol:AN0944 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001308
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 EMBL:AACD01000014 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486 KO:K14779
RefSeq:XP_658548.1 ProteinModelPortal:Q5BET6
EnsemblFungi:CADANIAT00001712 GeneID:2876717 KEGG:ani:AN0944.2
OMA:WSATMGS OrthoDB:EOG4HQHT5 Uniprot:Q5BET6
Length = 742
Score = 324 (119.1 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 69/170 (40%), Positives = 104/170 (61%)
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
S + + T+ + L ++ + +R++VG K++A +IK KLV+A +E+GKLL LRQ
Sbjct: 430 SSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIPNIKHKLVYAATEQGKLLGLRQ 489
Query: 154 SFAES--------LNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQ 198
+ L PP LIF Q+ RA L+ EL +D R V+HSDLS TQ
Sbjct: 490 LIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDIPPEAGGSARIAVLHSDLSDTQ 549
Query: 199 RENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R + + FR G+ W+L+ TD++ARG+DF+G+N V+NYD P+S A Y+HR+
Sbjct: 550 RSDIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSPAVYVHRV 599
Score = 151 (58.2 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 39 DILISTPXXXXXXXXXXXX----XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
DIL+STP V LVLDEAD L + + +D + ++C++P
Sbjct: 360 DILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD-IWRSCTHPE 418
Query: 95 IVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFAG 142
+ SL+SAT+ +E++A++ + + +R++VG K++A +IK KLV+A
Sbjct: 419 LRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIPNIKHKLVYAA 478
Query: 143 SEEGKLLALRQ 153
+E+GKLL LRQ
Sbjct: 479 TEQGKLLGLRQ 489
Score = 53 (23.7 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK 25
LA+Q E +KLA G ++ LMKK
Sbjct: 290 LASQIVNEGRKLALGTGVKVTLMKK 314
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 338 (124.0 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 80/214 (37%), Positives = 119/214 (55%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIV 96
CD+L++TP + V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVGE 334
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K AL
Sbjct: 335 RQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKS-ALLDL 393
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ S + LIFV++K A +L L RA IH D +Q++RE A+ FR+G +L
Sbjct: 394 LSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLL 453
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 454 VATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 332 (121.9 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 88/253 (34%), Positives = 132/253 (52%)
Query: 1 LATQTTRECKKLA-KGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q EC K + KG K I + D+ K DI+I+TP
Sbjct: 301 LALQVGAECSKYSYKGLKSVCIYGGGNRKGQIQDIMK-GVDIIIATPGRLNDLQMNNFVN 359
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ YLVLDEADK+ ++G +H + P + SAT PD + +LA S + +
Sbjct: 360 LRSITYLVLDEADKMLDLG--FEHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKE 417
Query: 119 AVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERAKE 175
+ V VG + A +++KQ ++ EE + +L Q F +SL+P V++FV K A +
Sbjct: 418 PMLVYVGTLDLVAVDTVKQNIIITTEEEKR--SLFQEFLQSLSPKDKVIVFVSRKLIADD 475
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L +L+ GI +H D Q+ RE A+DDF+ GK +LIATD+ +RG+D V V NY
Sbjct: 476 LSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNY 535
Query: 236 DFPDSGAAYIHRI 248
+FP + Y+HR+
Sbjct: 536 NFPRNIEEYVHRV 548
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 332 (121.9 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 88/253 (34%), Positives = 132/253 (52%)
Query: 1 LATQTTRECKKLA-KGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q EC K + KG K I + D+ K DI+I+TP
Sbjct: 310 LALQVGAECSKYSYKGLKSVCIYGGGNRKGQIQDIMK-GVDIIIATPGRLNDLQMNNFVN 368
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ YLVLDEADK+ ++G +H + P + SAT PD + +LA S + +
Sbjct: 369 LRSITYLVLDEADKMLDLG--FEHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKE 426
Query: 119 AVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERAKE 175
+ V VG + A +++KQ ++ EE + +L Q F +SL+P V++FV K A +
Sbjct: 427 PMLVYVGTLDLVAVDTVKQNIIITTEEEKR--SLFQEFLQSLSPKDKVIVFVSRKLIADD 484
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L +L+ GI +H D Q+ RE A+DDF+ GK +LIATD+ +RG+D V V NY
Sbjct: 485 LSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNY 544
Query: 236 DFPDSGAAYIHRI 248
+FP + Y+HR+
Sbjct: 545 NFPRNIEEYVHRV 557
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/216 (36%), Positives = 123/216 (56%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DILI+TP S +E LV DEAD++ ++G + ID + + P
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG-FKEEIDQITQYL--PK 180
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D + +++++I+ + V + KN A++ ++Q LV+ G + + L
Sbjct: 181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVY-GVDADRKRELTS 238
Query: 154 SFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
S N VL+F ++K+ A +L E+ DG+++ IH D SQ RE A+ +F+ GK
Sbjct: 239 FLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATDV ARG+D KG++ VINY+ P + Y+HRI
Sbjct: 299 ALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRI 334
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 78/216 (36%), Positives = 123/216 (56%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DILI+TP S +E LV DEAD++ ++G + ID + + P
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG-FKEEIDQITQYL--PK 180
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D + +++++I+ + V + KN A++ ++Q LV+ G + + L
Sbjct: 181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVY-GVDADRKRELTS 238
Query: 154 SFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
S N VL+F ++K+ A +L E+ DG+++ IH D SQ RE A+ +F+ GK
Sbjct: 239 FLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATDV ARG+D KG++ VINY+ P + Y+HRI
Sbjct: 299 ALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRI 334
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 84/250 (33%), Positives = 127/250 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPXXXXXXXXXXXXX 58
LA Q + AKG + +I + L+ DILI+TP
Sbjct: 93 LAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLF 152
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+VE LVLDEAD++ ++G + + V++ S P FSAT ++ +A IM D
Sbjct: 153 LGKVEVLVLDEADRMLDMG-FMPDLQRVLRRLS-PLRQTLFFSATFDSKIKAVAYRIMRD 210
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+ V V N+ +E+++Q +V+ ++ K L VL+F ++++ + L
Sbjct: 211 PIEVQVTPSNSTAETVQQ-MVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAE 269
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI+A I+ D SQ R+ A+DDF+AGK LIATDV ARG+D + V+NYD P
Sbjct: 270 ELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMP 329
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 330 FKAEDYVHRI 339
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 84/250 (33%), Positives = 127/250 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPXXXXXXXXXXXXX 58
LA Q + AKG + +I + L+ DILI+TP
Sbjct: 93 LAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLF 152
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+VE LVLDEAD++ ++G + + V++ S P FSAT ++ +A IM D
Sbjct: 153 LGKVEVLVLDEADRMLDMG-FMPDLQRVLRRLS-PLRQTLFFSATFDSKIKAVAYRIMRD 210
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+ V V N+ +E+++Q +V+ ++ K L VL+F ++++ + L
Sbjct: 211 PIEVQVTPSNSTAETVQQ-MVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAE 269
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI+A I+ D SQ R+ A+DDF+AGK LIATDV ARG+D + V+NYD P
Sbjct: 270 ELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMP 329
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 330 FKAEDYVHRI 339
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 325 (119.5 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 78/214 (36%), Positives = 115/214 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV- 96
CD+L++TP + + YLVLDEAD++ ++G I +V+ C P++
Sbjct: 320 CDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVKD 378
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + D V + VGR + SE+I QK+++ +E K + L
Sbjct: 379 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLL 438
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A N ++F ++K A L L G A IH D SQ +RE A+ F+ G +L
Sbjct: 439 SANE-NGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPIL 497
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 498 VATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 531
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 322 (118.4 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 85/256 (33%), Positives = 132/256 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM-----KKELVRSTDLSKFSCDILISTPXXXXXXXXXX 55
LA Q EC K K ++ + + K +R DL++ +I I+TP
Sbjct: 212 LAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIR--DLAR-GVEICIATPGRLIDMLEAG 268
Query: 56 XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
RV YLVLDEAD++ ++G I +V P ++SAT P V++L R
Sbjct: 269 KTNLKRVTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTLMWSATWPKEVQQLTRDY 326
Query: 116 MHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
++D ++V +G AS +I Q +++ S+ +L+ +S + +L+F +K
Sbjct: 327 LNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRT 386
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +D+FR GKT +++ATDV ARG+D KG+ V
Sbjct: 387 CDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHV 446
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 447 INYDMPGNIEDYVHRI 462
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 322 (118.4 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 75/214 (35%), Positives = 114/214 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD+L++TP + ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 CDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVEN 346
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K L
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
AE LIFV++K A +L L +A IH D +Q +RE A+ F+A +L
Sbjct: 407 SAEHKGL-TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADIL 465
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 466 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 318 (117.0 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 86/257 (33%), Positives = 139/257 (54%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q +E K +K + + + + DL K +I+I+TP
Sbjct: 184 LAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQK-GVEIVIATPGRLIDMMESNNT 242
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVV-KACSN--PSIVRSLFSATLPDFVEELARS 114
RV YLVLDEAD++ ++G DP + K S+ P +SAT P VE+L++
Sbjct: 243 NLRRVTYLVLDEADRMLDMG-----FDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKK 297
Query: 115 IMHDAVRVIVGRKNT-ASESIKQKL-VFAGSEE-GKLLALRQSFAESLNPPVLIFVQSKE 171
+++ +VI+G + A+ +I+Q + V + S++ KL+ L + + +L+F+ +K+
Sbjct: 298 FLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSR--ILVFLDTKK 355
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +FR+GK+ ++ ATDV ARG+D K V
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKY 415
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 416 VINYDFPGSLEDYVHRI 432
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 320 (117.7 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 87/254 (34%), Positives = 129/254 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPXXXXXXXXXXXXX 58
LA Q +EC K K ++ + + + R + +I I+TP
Sbjct: 207 LAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTN 266
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLVLDEAD++ ++G I +V P +FSAT P V+ LAR ++D
Sbjct: 267 LRRVTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTVMFSATWPKEVQRLARDYLND 324
Query: 119 AVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNP---PVLIFVQSKERAK 174
++V VG + AS +IKQ +V K L + E L VLIF +K A
Sbjct: 325 YIQVTVGSLDLAASHNIKQ-IVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVAD 383
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
++ L DG A IH D +Q +R+ +++FR GK+ +++ATDV +RG+D KG+ V N
Sbjct: 384 DITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFN 443
Query: 235 YDFPDSGAAYIHRI 248
YDFP + Y+HRI
Sbjct: 444 YDFPGNTEDYVHRI 457
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 322 (118.4 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 85/256 (33%), Positives = 131/256 (51%)
Query: 1 LATQTTRECKKLA-KGNK-FQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA EC K + KG K I + + D+SK DI+I+TP
Sbjct: 308 LALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISK-GVDIIIATPGRLNDLQMNNSVN 366
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS---NPSIVRSLFSATLPDFVEELARSI 115
+ YLV+DEADK+ ++ +P ++ P + SAT PD V +LA S
Sbjct: 367 LRSITYLVIDEADKMLDM-----EFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSY 421
Query: 116 MHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKER 172
+ D + V VG N A ++KQ ++ +E + AL Q F E+++P V++FV K
Sbjct: 422 LKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKR--ALTQEFVENMSPNDKVIMFVSQKHI 479
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A +L + GI A +H + Q+ +E AV+DF++G +LI TD+++RG+D V V
Sbjct: 480 ADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHV 539
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HR+
Sbjct: 540 YNYDFPRNIDVYVHRV 555
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 321 (118.1 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 78/220 (35%), Positives = 122/220 (55%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I+I+TP RV YLVLDEAD++ ++G I +V
Sbjct: 284 DLRR-GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-FEPQIRKIVSQI- 340
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNT-ASESIKQKLVFAGSEE--GKL 148
P L+SAT P VE LAR + D + I+G + A++SI Q + + E +L
Sbjct: 341 RPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRL 400
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L + + +LIFV++K ++ +L DG A IH D +Q++R+ + +F++
Sbjct: 401 LTLLKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKS 458
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G++ ++ ATDV ARG+D K + CV+NYDFP++ YIHRI
Sbjct: 459 GRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRI 498
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 322 (118.4 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 76/222 (34%), Positives = 123/222 (55%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C+I+I+TP R YLVLDEAD++ ++G I +V
Sbjct: 400 DLQR-GCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG-FEPQIRKIVSQI- 456
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAG--SEEGKL 148
P ++SAT P V++LA + + +++ +G +A+ +I+Q + S+E KL
Sbjct: 457 RPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKL 516
Query: 149 LALRQSFAESLNPP--VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDF 206
L ++ P ++IFV++K R L + G+R G IH D SQ++R+ + +F
Sbjct: 517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576
Query: 207 RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R+GK+ +L+ATDV ARG+D G+ VIN+D+P + YIHRI
Sbjct: 577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRI 618
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 322 (118.4 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 82/254 (32%), Positives = 123/254 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q E KK +K ++ + + + K C+I+++TP
Sbjct: 313 LAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALT 372
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
R YLVLDEAD++F++G +P V++ P LFSAT+P VE+LAR I
Sbjct: 373 MMRASYLVLDEADRMFDLG-----FEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREI 427
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + ++ VL+F K
Sbjct: 428 LSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVD 487
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L + + +H D Q R + F++G VLIATDV ARG+D K + V+N
Sbjct: 488 EIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVN 547
Query: 235 YDFPDSGAAYIHRI 248
YD ++HRI
Sbjct: 548 YDIAKDMDMHVHRI 561
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 75/223 (33%), Positives = 118/223 (52%)
Query: 26 ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP 85
++ T + K D+L++TP S+V++LVLDEAD++ ++G L I+
Sbjct: 130 KMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMG-FLTDIEK 188
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
++ A + +FSAT D V+ LA ++ + V ++NT S IKQ + + +EE
Sbjct: 189 LLLAVKHKHQTL-MFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVYWV-TEE 246
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
K L + + VL+F +KE A L EL DGI+A + H D +Q R A++
Sbjct: 247 RKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQ 306
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F GK VL+ATDV ARG+D + V+N+ P Y+HR+
Sbjct: 307 FSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRV 349
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 311 (114.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 78/210 (37%), Positives = 115/210 (54%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP S V LV+DEAD++ ++G ++ I+ V + + P
Sbjct: 124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG-FVRDIEKVKRLIA-PVHQTM 181
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT D V++L+ +++ V V TAS +++Q LV+ + K L + +
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVEQ-LVYRVDKRRKAELLSELVGRN 239
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F +KE A+ L EL DGI AGV H D +Q R +DDF+AGK VL+ATD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D + + VIN + P Y+HRI
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRI 329
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 311 (114.5 bits), Expect = 8.3e-28, P = 8.3e-28
Identities = 78/210 (37%), Positives = 115/210 (54%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP S V LV+DEAD++ ++G ++ I+ V + + P
Sbjct: 124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLG-FVRDIEKVKRLIA-PVHQTM 181
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT D V++L+ +++ V V TAS +++Q LV+ + K L + +
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVEQ-LVYRVDKRRKAELLSELVGRN 239
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F +KE A+ L EL DGI AGV H D +Q R +DDF+AGK VL+ATD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D + + VIN + P Y+HRI
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRI 329
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 73/211 (34%), Positives = 118/211 (55%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP +VE LVLDEAD++ ++G + I V+ P+ ++
Sbjct: 127 DVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG-FIHDIRRVLTKL--PAKRQN 183
Query: 99 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
L FSAT D ++ LA ++H+ + + V R+NTAS+ + Q + F + + L L +
Sbjct: 184 LLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKREL-LSHMIGK 242
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL+AT
Sbjct: 243 GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT 302
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
D+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 303 DIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 311 (114.5 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 77/210 (36%), Positives = 110/210 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP V LVLDEAD++ ++G ++ I+ +++
Sbjct: 125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG-FIEDINNIIEKLPEQR-QNL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSATL V+ LA++ + DA+ + + RKN AS I Q L + L L E+
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL-LSHLIKEN 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIF+Q+K A +L +L GI A HS SQ RE + DF+AGK L+AT
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V++RG+D + VINYD PD YIHRI
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRI 331
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 311 (114.5 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 77/210 (36%), Positives = 110/210 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP V LVLDEAD++ ++G ++ I+ +++
Sbjct: 125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMG-FIEDINNIIEKLPEQR-QNL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSATL V+ LA++ + DA+ + + RKN AS I Q L + L L E+
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL-LSHLIKEN 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIF+Q+K A +L +L GI A HS SQ RE + DF+AGK L+AT
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V++RG+D + VINYD PD YIHRI
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRI 331
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 81/214 (37%), Positives = 116/214 (54%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K +++++ P SR+E LVLDEAD++F++G L I V+K P
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMG-FLPDIRRVLKHLP-PR 175
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + LA+ I+ D V V VG A ++ L + + K L +
Sbjct: 176 RQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAV-TVAHAL-YPVEQHLKTPLLLEL 233
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VLIF ++K RAK L +L G RA + +LSQ +R+ A+D FR G +L
Sbjct: 234 LRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQIL 293
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D V+ VINYD PD+ AYIHRI
Sbjct: 294 VATDIAARGIDVSQVSHVINYDIPDTAEAYIHRI 327
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 87/254 (34%), Positives = 133/254 (52%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q +EC K + +K + + +S + K ILI+ P
Sbjct: 198 LAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTN 257
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLVLDEADK+ ++G L+ I +V P ++SAT P V+ LA+ + +
Sbjct: 258 LMRVTYLVLDEADKMLDMGFELQ-IRKIVDQI-RPDRQTLMWSATWPKEVQALAKDLCKE 315
Query: 119 A-VRVIVGRKN-TASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQSKERAK 174
++V VG TA SIKQ++ E G L +L Q + N +++FV++K+ A
Sbjct: 316 QPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKD-NDRIIVFVETKKNAD 374
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+ L DG+ A IH D Q +R +++F+ GK+ ++IATDV +RG+D K V VIN
Sbjct: 375 FITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVIN 434
Query: 235 YDFPDSGAAYIHRI 248
+DFP+ Y+HRI
Sbjct: 435 FDFPNQIEDYVHRI 448
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 311 (114.5 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 87/254 (34%), Positives = 133/254 (52%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q +EC K + +K + + +S + K ILI+ P
Sbjct: 198 LAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTN 257
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLVLDEADK+ ++G L+ I +V P ++SAT P V+ LA+ + +
Sbjct: 258 LMRVTYLVLDEADKMLDMGFELQ-IRKIVDQI-RPDRQTLMWSATWPKEVQALAKDLCKE 315
Query: 119 A-VRVIVGRKN-TASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQSKERAK 174
++V VG TA SIKQ++ E G L +L Q + N +++FV++K+ A
Sbjct: 316 QPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKD-NDRIIVFVETKKNAD 374
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+ L DG+ A IH D Q +R +++F+ GK+ ++IATDV +RG+D K V VIN
Sbjct: 375 FITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVIN 434
Query: 235 YDFPDSGAAYIHRI 248
+DFP+ Y+HRI
Sbjct: 435 FDFPNQIEDYVHRI 448
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 308 (113.5 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 76/215 (35%), Positives = 118/215 (54%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP S+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 308 (113.5 bits), Expect = 9.7e-27, P = 9.7e-27
Identities = 84/253 (33%), Positives = 129/253 (50%)
Query: 1 LATQTTRECKK-LAKGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q EC K L KG K I + D++K DI+I+TP
Sbjct: 287 LALQVEAECSKYLYKGLKSVCIYGGGNRKGQIQDVTK-GVDIIIATPGRLNDLQMNNFVN 345
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ YLVLDEADK+ ++G +H + P + +A+ PD LA+S +
Sbjct: 346 LRSITYLVLDEADKMLDLG--FEHQIMKILLDVRPDRQTVMTTASWPDSTRRLAQSYLKQ 403
Query: 119 AVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERAKE 175
+ V VG + + ++KQ ++ EE + L + F +SL+P V++FV K A +
Sbjct: 404 PMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLV--KEFLQSLSPKDKVIVFVSRKLVADD 461
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L +L+ GI +H D Q+ R+ A++DFR G+ +LIATD+ ARG+D V V NY
Sbjct: 462 LSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNY 521
Query: 236 DFPDSGAAYIHRI 248
+FP + Y+HR+
Sbjct: 522 NFPRNIEEYVHRV 534
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 303 (111.7 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 79/220 (35%), Positives = 118/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 209 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 265
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D V++ VG +A+ +I Q + V SE+ KL
Sbjct: 266 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKL 325
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 326 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 385
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 386 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 425
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 307 (113.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 77/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 310 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 367
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 368 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 427
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + +L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 428 FLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 488 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 527
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 307 (113.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 77/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 311 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 368
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 369 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 428
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + +L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 429 FLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 488
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 489 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 528
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 306 (112.8 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 74/215 (34%), Positives = 120/215 (55%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +++ YLVLDEAD++ ++G + I+ ++K+ PS
Sbjct: 414 CNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMG-FREDIENLLKSSGMPSKEE 472
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR I+ D + V+VG+ A ++Q +V E GK L +
Sbjct: 473 RQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQ-MVIEVDEFGKKDKLME 531
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E + ++FV++K++A + L + + + IH D Q +RE A+ DFR G+ V
Sbjct: 532 ILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPV 591
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++AT V ARG+D + V+ VIN+D PD Y+HRI
Sbjct: 592 IVATSVAARGLDIENVSYVINFDIPDDIDEYVHRI 626
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 305 (112.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 311 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 368
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 369 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 428
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 429 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 488
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 489 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 528
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 305 (112.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 305 (112.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 305 (112.4 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 305 (112.4 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 313 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 370
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 371 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 430
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 431 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 490
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 491 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 530
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 305 (112.4 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 79/223 (35%), Positives = 119/223 (53%)
Query: 26 ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP 85
+L + K ++I+TP +YL LDEAD+L ++G I
Sbjct: 344 DLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLG-FEDDIRS 402
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
V+ +N LFSAT+P ++E ARS + V V VGR A+ ++ Q++ F E
Sbjct: 403 VLDNFTNQRQTL-LFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPE 460
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
K++ L + ++ PPVLIF ++K+ ++Y L + A IH D SQ +RE+A+
Sbjct: 461 AKIVYLLECLQKT-PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKA 519
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR GK VL+ATDV ++G+DF + VIN+D P YIHRI
Sbjct: 520 FREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRI 562
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 302 (111.4 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 83/254 (32%), Positives = 132/254 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q EC K ++ + + + +S DLS+ S +I+I+TP
Sbjct: 198 LAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGS-EIVIATPGRLIDMLEIGKT 256
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
RV YLVLDEAD++ ++G I +V P ++SAT P V++LA ++
Sbjct: 257 NLKRVTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTLMWSATWPKEVKQLAADYLN 314
Query: 118 DAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
D ++V VG +AS +I Q ++V + +L ++ ++ LIF +K
Sbjct: 315 DPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCD 374
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
++ L DG A IH D Q +R+ + +FR G++ +++ATDV ARG+D KG+N VIN
Sbjct: 375 DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 235 YDFPDSGAAYIHRI 248
YD P + Y+HRI
Sbjct: 435 YDMPGNIEDYVHRI 448
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 305 (112.4 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 78/222 (35%), Positives = 118/222 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 354 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 411
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 147
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 412 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRS 471
Query: 148 -LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDF 206
LL L + + L+FV++K+ A L L +G IH D SQ RE A+ F
Sbjct: 472 FLLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQF 531
Query: 207 RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R+GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 532 RSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 573
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 304 (112.1 bits), Expect = 3.5e-26, P = 3.5e-26
Identities = 76/220 (34%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 214 DLER-GVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 270
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D V++ +G +A+ +I Q + ++ KL
Sbjct: 271 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKL 330
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K+R EL + DG A IH D SQ +R+ + +FR+
Sbjct: 331 IQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRS 390
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 391 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 430
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/210 (34%), Positives = 108/210 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP SRVE+ VLDEAD++ ++G L I ++K S
Sbjct: 138 DILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG-FLPDIRRILKLLPE-SRQNL 195
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT ++EL ++H + V R+NTA+ I +V + K L
Sbjct: 196 LFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH-VVHPVDRQRKRELLSFMIGSK 254
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F ++K A L +L DG+ + IH + SQ R A+ F+ GK VL+ATD
Sbjct: 255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATD 314
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D + VIN++ PD+ Y+HR+
Sbjct: 315 VAARGLDIDKLPHVINFELPDAAKDYVHRV 344
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/210 (34%), Positives = 108/210 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP SRVE+ VLDEAD++ ++G L I ++K S
Sbjct: 138 DILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMG-FLPDIRRILKLLPE-SRQNL 195
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT ++EL ++H + V R+NTA+ I +V + K L
Sbjct: 196 LFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITH-VVHPVDRQRKRELLSFMIGSK 254
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F ++K A L +L DG+ + IH + SQ R A+ F+ GK VL+ATD
Sbjct: 255 NWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATD 314
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D + VIN++ PD+ Y+HR+
Sbjct: 315 VAARGLDIDKLPHVINFELPDAAKDYVHRV 344
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 303 (111.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 76/220 (34%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +++ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIIEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPGDIEEYVHRI 529
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 302 (111.4 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 84/254 (33%), Positives = 128/254 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK--KELVRS-TDLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q +E K + + Q ++ +E R + + ILI+TP
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFI 293
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSI 115
+ YLVLDEAD++ ++G I +V P R+ +FSAT P ++ LA+
Sbjct: 294 GLAGCRYLVLDEADRMLDMG-FEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDF 352
Query: 116 MHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ D + + VGR + SE+I+Q+L++ E + + E VL+FV++K A
Sbjct: 353 LKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGAN 412
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
EL L IR+ IH DL Q +RE ++ FR+G+ +L+AT V ARG+D V VIN
Sbjct: 413 ELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVIN 472
Query: 235 YDFPDSGAAYIHRI 248
YD P Y+HRI
Sbjct: 473 YDLPGDSDEYVHRI 486
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 302 (111.4 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 302 (111.4 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 312 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 369
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 370 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRS 429
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 301 (111.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 289 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 346
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 347 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 406
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 407 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 466
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 467 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 506
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 301 (111.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 76/216 (35%), Positives = 113/216 (52%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD+L +TP + +++LVLDEAD++ ++G I +V+ S+
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMG-FEPQIRHIVEGADMTSVEE 364
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT P ++ LAR + D V + VGR + SE+I QK+V E + L
Sbjct: 365 RQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLL--D 422
Query: 155 FAESLNPP--VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+L P LIFV++K A L L A IH D +Q +RE A++ FR+G+T
Sbjct: 423 ILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTS 482
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+++AT V +RG+D V VINYD P Y+HRI
Sbjct: 483 IMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRI 518
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 301 (111.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 290 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 347
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 348 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRS 407
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 408 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 467
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 468 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 507
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 301 (111.0 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 307 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 364
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 365 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRS 424
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 425 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 484
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 485 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRI 524
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 301 (111.0 bits), Expect = 7.1e-26, P = 7.1e-26
Identities = 77/220 (35%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 310 DLER-GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 367
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P VR +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 368 MPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRS 427
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRI 527
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 74/212 (34%), Positives = 112/212 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR- 97
DILI T ++ +VLDEAD+++++G +K I + + P+ R
Sbjct: 136 DILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLG-FIKDIRWLFRRMP-PANQRL 193
Query: 98 -SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSATL V ELA M++A + V + IK++L + +EE K+ L+
Sbjct: 194 NMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEE-KMRLLQTLIE 252
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E +IF +K R +E++G LA DG R G++ D++Q +R +D+F G +L+A
Sbjct: 253 EEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVA 312
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+ V V NYD PD Y+HRI
Sbjct: 313 TDVAARGLHIPAVTHVFNYDLPDDCEDYVHRI 344
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 427
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 427
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 427
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 299 (110.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 74/214 (34%), Positives = 112/214 (52%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV- 96
CD+L++TP ++YL+LDEAD++ ++G I +V+ P++
Sbjct: 322 CDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVND 380
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + D V + VGR + SE+I QK+ + + + + L
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDIL 440
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
LIFV++K A L L A IH D +Q +RE A++ FR+G+ +L
Sbjct: 441 HTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPIL 500
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 501 VATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 534
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 299 (110.3 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 76/220 (34%), Positives = 114/220 (51%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP YLVLDEAD++ ++G I +V+ +
Sbjct: 344 DLER-GCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMG-FEPQIRRIVEQDT 401
Query: 92 NPSI-VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P +R +FSAT P ++ LAR + D + + VGR + SE+I QK+V+ + +
Sbjct: 402 MPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRS 461
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 462 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRS 521
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 522 GRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 561
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 291 (107.5 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 79/252 (31%), Positives = 130/252 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM---KKELVRSTDLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q ++ LAK + ++ ++ + V+ L + DILI T
Sbjct: 96 LAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQ-GVDILIGTTGRIIDYVRQGII 154
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRSLFSATLPDFVEELARSIM 116
+ ++ +VLDEAD++F++G +K I + + N + LFSATL V+ELA M
Sbjct: 155 NLNAIQAVVLDEADRMFDLG-FIKDIRFLFRRMPNADQRLNMLFSATLSMKVQELAYDHM 213
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+D V+V + + S++IK++ +F S+E K+ L E ++F +K + L
Sbjct: 214 NDPVKVEIAPEEKTSKNIKEE-IFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTKHSCENL 272
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ L DG R G++ D+ Q +R ++ F G+ +L+ATDV ARG+ V+ V NYD
Sbjct: 273 WSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYD 332
Query: 237 FPDSGAAYIHRI 248
PD Y+HRI
Sbjct: 333 LPDDCEDYVHRI 344
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 291 (107.5 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 79/252 (31%), Positives = 130/252 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM---KKELVRSTDLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q ++ LAK + ++ ++ + V+ L + DILI T
Sbjct: 96 LAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQ-GVDILIGTTGRIIDYVRQGII 154
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRSLFSATLPDFVEELARSIM 116
+ ++ +VLDEAD++F++G +K I + + N + LFSATL V+ELA M
Sbjct: 155 NLNAIQAVVLDEADRMFDLG-FIKDIRFLFRRMPNADQRLNMLFSATLSMKVQELAYDHM 213
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+D V+V + + S++IK++ +F S+E K+ L E ++F +K + L
Sbjct: 214 NDPVKVEIAPEEKTSKNIKEE-IFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTKHSCENL 272
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ L DG R G++ D+ Q +R ++ F G+ +L+ATDV ARG+ V+ V NYD
Sbjct: 273 WSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYD 332
Query: 237 FPDSGAAYIHRI 248
PD Y+HRI
Sbjct: 333 LPDDCEDYVHRI 344
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 299 (110.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 290 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 346
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 466
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 467 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 506
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 299 (110.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 290 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 346
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 466
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 467 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 506
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 299 (110.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 292 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 348
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 468
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 469 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 508
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 299 (110.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 78/220 (35%), Positives = 117/220 (53%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 292 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 348
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 468
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 469 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 508
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 290 (107.1 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 74/250 (29%), Positives = 124/250 (49%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXXX 58
LA Q + +K F + + + T K DI+++TP
Sbjct: 86 LAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVATPGRLLEHLTACNLS 145
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
S V++LVLDEAD++ ++G I +++A N LFSAT V++LA +M
Sbjct: 146 LSSVDFLVLDEADRMLDMG-FSADIQKILQAV-NKKRQNLLFSATFSSAVKKLANEMMIK 203
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+ ++NT ++++ Q +V+ + K L + + VL+F +++ A L
Sbjct: 204 PQVISADKQNTTADTVSQ-VVYPVEQRRKRELLSELIGKKNWQQVLVFTATRDAADTLVK 262
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI + V+H + +Q R A+ +F +GK VL+AT+V ARG+D + V+N+D P
Sbjct: 263 ELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLP 322
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 323 FLAEDYVHRI 332
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 297 (109.6 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 70/209 (33%), Positives = 108/209 (51%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I+++TP YL +DEAD++ ++G + + + L
Sbjct: 312 IVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMG-FEEDVRTIFSFFKGQRQTL-L 369
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
FSAT+P ++ ARS + V + VGR AS ++ Q++ + +E K++ L ++
Sbjct: 370 FSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYV-KQEAKVVYLLDCLQKTA 428
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
PPVLIF + K+ ++ L G+ A IH Q +R AVD +R GK VL+ATDV
Sbjct: 429 -PPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDV 487
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++G+DF V VINYD PD Y+HRI
Sbjct: 488 ASKGLDFPNVQHVINYDMPDDIENYVHRI 516
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 296 (109.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 74/220 (33%), Positives = 114/220 (51%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP +YLVLDEAD++ ++G I +V+ +
Sbjct: 360 DLER-GCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMG-FEPQIRRIVEQDT 417
Query: 92 NP---SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P S +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + +
Sbjct: 418 MPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRS 477
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G IH D SQ RE A+ FR+
Sbjct: 478 FLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRS 537
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ +++AT V ARG+D V VIN+D P Y+HRI
Sbjct: 538 GRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 577
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 294 (108.6 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 73/219 (33%), Positives = 114/219 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
++ K I+++TP YL LDEAD+L ++G D + +
Sbjct: 273 EVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLG----FEDDIREVFD 328
Query: 92 NPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 149
+ R LFSAT+P ++ ARS + V V VGR A+ + Q++ + +E K++
Sbjct: 329 HFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYV-KQEAKIV 387
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
L + ++ +PPVLIF ++K +++ L G+ A IH Q RE A+ F+AG
Sbjct: 388 YLLECLQKT-SPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAG 446
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
K VL+ATDV ++G+DF + VINYD P Y+HRI
Sbjct: 447 KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 485
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 294 (108.6 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 81/256 (31%), Positives = 130/256 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXXX 58
LATQ E K + ++ + + L DI+++TP
Sbjct: 242 LATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRIS 301
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
++ YLVLDEAD++ ++G I +VK P+ ++L ++AT P V ++A ++
Sbjct: 302 LRQISYLVLDEADRMLDMG-FEPQIRKIVKEI--PTKRQTLMYTATWPKGVRKIAADLLV 358
Query: 118 DAVRVIVGRKN--TASESIKQKL-VFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKER 172
+ +V +G + A++SI Q + V A E+ + L + S P V+IF +K
Sbjct: 359 NPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRL---EQILRSQEPGSKVIIFCSTKRM 415
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
+L L A IH D SQ +R+N ++ FR+G+T VL+ATDV ARG+D K + V
Sbjct: 416 CDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAV 474
Query: 233 INYDFPDSGAAYIHRI 248
+NYDFP+ Y+HRI
Sbjct: 475 VNYDFPNGVEDYVHRI 490
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 71/189 (37%), Positives = 106/189 (56%)
Query: 63 EYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRS--LFSATLPDFVEELARSIMHDA 119
+YLVLDEAD++ ++G I +V+ + P VR +FSAT P ++ LAR + +
Sbjct: 87 KYLVLDEADRMLDMG-FEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 145
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGE 179
+ + VGR + SE+I QK+V+ + + L A + L+FV++K+ A L
Sbjct: 146 IFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDF 205
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
L +G IH D SQ RE A+ FR+GK+ +L+AT V ARG+D V VIN+D P
Sbjct: 206 LYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPS 265
Query: 240 SGAAYIHRI 248
Y+HRI
Sbjct: 266 DIEEYVHRI 274
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 287 (106.1 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 71/211 (33%), Positives = 109/211 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 97
DILI T + ++ +VLDEAD++F++G +K I + + P +
Sbjct: 136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG-FIKDIRFLFRRMPEPKDRLN 194
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSATL V+ELA M++ V+V + I+++L F S E K+ L+ E
Sbjct: 195 MLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEEL-FYPSNEHKMALLQTLIEE 253
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+IF +K R ++++ LA D R G++ D+ Q +RE ++ F G +L+AT
Sbjct: 254 EWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVAT 313
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+ V V NYD PD Y+HRI
Sbjct: 314 DVAARGLHIPQVTHVFNYDLPDDCEDYVHRI 344
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 287 (106.1 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 71/211 (33%), Positives = 109/211 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 97
DILI T + ++ +VLDEAD++F++G +K I + + P +
Sbjct: 136 DILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLG-FIKDIRFLFRRMPEPKDRLN 194
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSATL V+ELA M++ V+V + I+++L F S E K+ L+ E
Sbjct: 195 MLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEEL-FYPSNEHKMALLQTLIEE 253
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+IF +K R ++++ LA D R G++ D+ Q +RE ++ F G +L+AT
Sbjct: 254 EWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVAT 313
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+ V V NYD PD Y+HRI
Sbjct: 314 DVAARGLHIPQVTHVFNYDLPDDCEDYVHRI 344
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 286 (105.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 75/251 (29%), Positives = 129/251 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q E KL K K + + + + R + ++++ TP
Sbjct: 81 LALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFP 140
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ ++ ++LDEAD++ ++G + I+ ++ +N LFSATLP ++ + + +
Sbjct: 141 AAEIKIVILDEADEMLDMG-FIDDIEAILNTLTNRQQTL-LFSATLPAPIKTIIKKFLGG 198
Query: 119 AVRV-IVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
V +VGR+ T +I+Q + + E K+ L L ++F ++K+R E+
Sbjct: 199 YKTVKLVGREKTVP-AIRQ-VYYELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVV 256
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L F G A +H D+SQ +R + F+AGKT +L+ATDV ARG+D V+ VIN+D
Sbjct: 257 EQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDI 316
Query: 238 PDSGAAYIHRI 248
P + +YIHRI
Sbjct: 317 PQNPESYIHRI 327
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 286 (105.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 75/251 (29%), Positives = 129/251 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q E KL K K + + + + R + ++++ TP
Sbjct: 81 LALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFP 140
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ ++ ++LDEAD++ ++G + I+ ++ +N LFSATLP ++ + + +
Sbjct: 141 AAEIKIVILDEADEMLDMG-FIDDIEAILNTLTNRQQTL-LFSATLPAPIKTIIKKFLGG 198
Query: 119 AVRV-IVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
V +VGR+ T +I+Q + + E K+ L L ++F ++K+R E+
Sbjct: 199 YKTVKLVGREKTVP-AIRQ-VYYELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVV 256
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L F G A +H D+SQ +R + F+AGKT +L+ATDV ARG+D V+ VIN+D
Sbjct: 257 EQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDI 316
Query: 238 PDSGAAYIHRI 248
P + +YIHRI
Sbjct: 317 PQNPESYIHRI 327
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 296 (109.3 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 79/252 (31%), Positives = 122/252 (48%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+RV+ G A+E + Q +++ +GS+ L F S + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGS--VLLFVTKKANAEEL 513
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 514 ANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYD 573
Query: 237 FPDSGAAYIHRI 248
+ HRI
Sbjct: 574 VARDIDTHTHRI 585
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 296 (109.3 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 83/254 (32%), Positives = 123/254 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q E K +K K + ++ + + K C+I+++TP
Sbjct: 390 LAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATK 449
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+RV YLVLDEADK+F+ G P V + N P LFSAT VEE AR+I
Sbjct: 450 LNRVSYLVLDEADKMFDFG-----FGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTI 504
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +++ +G +A+ I Q + S+ K L A L+ VLIFV +K +
Sbjct: 505 LSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAVE 564
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L L G + +H D +Q +R + F+ GK +LIATDV ARG+D + V+N
Sbjct: 565 QLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVN 624
Query: 235 YDFPDSGAAYIHRI 248
YD ++ HRI
Sbjct: 625 YDTSRDIESHTHRI 638
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 243 (90.6 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 57/150 (38%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LARS + V +G E ++QK VF SE K L +
Sbjct: 603 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 661
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
+PP++IFV K+ L L G A +H Q QRE A+ + +AG +L+ATD
Sbjct: 662 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD 721
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D + V+ V+NYD + YIHRI
Sbjct: 722 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 751
Score = 78 (32.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP SR Y+VLDEAD++ ++G
Sbjct: 515 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 557
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 243 (90.6 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 57/150 (38%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LARS + V +G E ++QK VF SE K L +
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
+PP++IFV K+ L L G A +H Q QRE A+ + +AG +L+ATD
Sbjct: 663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD 722
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D + V+ V+NYD + YIHRI
Sbjct: 723 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 752
Score = 78 (32.5 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP SR Y+VLDEAD++ ++G
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 243 (90.6 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 57/150 (38%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LARS + V +G E ++QK VF SE K L +
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
+PP++IFV K+ L L G A +H Q QRE A+ + +AG +L+ATD
Sbjct: 663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD 722
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D + V+ V+NYD + YIHRI
Sbjct: 723 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 752
Score = 78 (32.5 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP SR Y+VLDEAD++ ++G
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 243 (90.6 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 57/150 (38%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LARS + V +G E ++QK VF SE K L +
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK-VFLMSESEKRKKLLAILEQG 662
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
+PP++IFV K+ L L G A +H Q QRE A+ + +AG +L+ATD
Sbjct: 663 FDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD 722
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D + V+ V+NYD + YIHRI
Sbjct: 723 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 752
Score = 78 (32.5 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP SR Y+VLDEAD++ ++G
Sbjct: 516 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 79/252 (31%), Positives = 128/252 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPXXXXXXXXXXXXX 58
LA Q + K AKG ++ + + + F+ D+LI+TP
Sbjct: 87 LALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALN 146
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
+++ LV DEAD++ ++G + I V+K P+ ++L FSATL D + +++++
Sbjct: 147 LNQLNTLVFDEADRMLDMG-FMDEIQAVLKQV--PAQRQTLLFSATLDDSIFSFSKNLLR 203
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN-PPVLIFVQSKERAKEL 176
D R+ V + NT + I+Q+ V+A + K + S N VLIF ++K+ +L
Sbjct: 204 DPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEFVSH-LVRSKNWQQVLIFSRTKQGVDKL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L G+ H DLSQ RE + +F+ G VL+ATDV ARG+D + VIN++
Sbjct: 262 TAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFE 321
Query: 237 FPDSGAAYIHRI 248
P YIHRI
Sbjct: 322 LPFIAEDYIHRI 333
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 79/252 (31%), Positives = 128/252 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPXXXXXXXXXXXXX 58
LA Q + K AKG ++ + + + F+ D+LI+TP
Sbjct: 87 LALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALN 146
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
+++ LV DEAD++ ++G + I V+K P+ ++L FSATL D + +++++
Sbjct: 147 LNQLNTLVFDEADRMLDMG-FMDEIQAVLKQV--PAQRQTLLFSATLDDSIFSFSKNLLR 203
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN-PPVLIFVQSKERAKEL 176
D R+ V + NT + I+Q+ V+A + K + S N VLIF ++K+ +L
Sbjct: 204 DPKRIEVAKPNTTAAQIEQR-VYAIDSDRKTEFVSH-LVRSKNWQQVLIFSRTKQGVDKL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L G+ H DLSQ RE + +F+ G VL+ATDV ARG+D + VIN++
Sbjct: 262 TAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFE 321
Query: 237 FPDSGAAYIHRI 248
P YIHRI
Sbjct: 322 LPFIAEDYIHRI 333
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 293 (108.2 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 82/253 (32%), Positives = 128/253 (50%)
Query: 1 LATQTTRECKKLA-KGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q E KK + +G K + ++ +DL + +I+I TP
Sbjct: 369 LALQIEMEVKKYSFRGMKAVCVYGGGNRNMQISDLER-GAEIIICTPGRLNDLIMANVID 427
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
S + YLVLDEAD++ ++G I V+ P + SAT P V LA+S M +
Sbjct: 428 VSTITYLVLDEADRMLDMG-FEPQIRKVMLDI-RPDRQTIMTSATWPPGVRRLAQSYMKN 485
Query: 119 AVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERAKE 175
++V VG + A+ S+KQ + + K + SF ++++ ++IF K RA +
Sbjct: 486 PIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTIT-SFVKNMSSTDKIIIFCGRKVRADD 544
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L EL DG IH + Q RE A+ D ++G +L+ATDV +RG+D + + VINY
Sbjct: 545 LSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINY 604
Query: 236 DFPDSGAAYIHRI 248
DFP + Y+HR+
Sbjct: 605 DFPHNIEEYVHRV 617
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 242 (90.2 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 56/150 (37%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LARS + V +G E ++QK++ SE K L + A
Sbjct: 591 MFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVILM-SEGEKRKKLLEVLASG 649
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
PP++IFV K+ L L G A +H Q QRE A+ + +AG +L+ATD
Sbjct: 650 FEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATD 709
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D + V+ V+NYD + YIHRI
Sbjct: 710 VAGRGIDIQDVSMVLNYDMAKNIEDYIHRI 739
Score = 78 (32.5 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP SR Y+VLDEAD++ ++G
Sbjct: 503 RMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 545
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 295 (108.9 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 81/259 (31%), Positives = 129/259 (49%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA QT +E K AK ++ + S ++ K +I++ TP
Sbjct: 389 LAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGK 448
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV YLVLDEAD++F+ G +P ++K +N P LFSAT P +E LA
Sbjct: 449 VTNLRRVTYLVLDEADRMFDKG-----FEPQIMKVVNNIRPDKQTVLFSATFPRHMEALA 503
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R ++ V ++VG K+ I Q V + KLL L + E + ++FV +
Sbjct: 504 RKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSS--IVFVDKQ 561
Query: 171 ERAKELYGELAFDGIRA-GVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
E+A ++ +L G + +H + Q R++++ DF+ G VL+AT V ARG+D K +
Sbjct: 562 EKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNL 621
Query: 230 NCVINYDFPDSGAAYIHRI 248
V+NYD P+ Y+HR+
Sbjct: 622 ILVVNYDCPNHYEDYVHRV 640
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 289 (106.8 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 134 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 190
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 191 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 250
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 251 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 310
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 311 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 350
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 289 (106.8 bits), Expect = 7.8e-25, P = 7.8e-25
Identities = 80/254 (31%), Positives = 120/254 (47%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXS 60
LA QT + K +L+ + S + +L+ TP S
Sbjct: 232 LARQTLEVITTMGKFTNITTQLVVPNAIPRG--SSVNAQVLVGTPGIAIDLIRRRQLNLS 289
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+++ VLDEAD + E L V KA + LFSAT P V E A ++ DA
Sbjct: 290 KMKVFVLDEADNMLEAQGLGDQAIRVKKALPR-GVQLVLFSATFPTEVREYAERLVPDAN 348
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
+ + ++ + IKQ + SE+ K L + + +IFV+ KE A LYG++
Sbjct: 349 SLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLLTIGSSIIFVEKKETADVLYGKM 408
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+G V+H L T R+ +DDFR G++ VLI T+V+ARG+D V+ V+NYD P
Sbjct: 409 KKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYDMPTD 468
Query: 241 --G----AAYIHRI 248
G + Y+HRI
Sbjct: 469 KYGKPDPSTYLHRI 482
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 292 (107.8 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 80/252 (31%), Positives = 121/252 (48%)
Query: 1 LATQTTRECKKLA-KGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXX 59
LA Q EC K + KG K + + DI+I+TP
Sbjct: 364 LALQIEAECNKYSYKGFKSICIYGGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINL 423
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
+ YLVLDEAD++ ++G I ++ P + SAT P V LA+S + D
Sbjct: 424 RSITYLVLDEADRMLDMG-FEPQIMKIILDI-RPDRQTVMTSATWPPGVRRLAKSYLKDP 481
Query: 120 VRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKERAKEL 176
+ V VG + A+ +++Q ++F +E K F + P VLIFV K +A +L
Sbjct: 482 MMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVF--DFIHRMEPLDKVLIFVGKKLKADDL 539
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L GI +H D Q RE A+ DF+ G+ +L+ATD+ +RG+D + V NYD
Sbjct: 540 SSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYD 599
Query: 237 FPDSGAAYIHRI 248
FP + Y+HR+
Sbjct: 600 FPRNVEEYVHRV 611
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 289 (106.8 bits), Expect = 9.0e-25, P = 9.0e-25
Identities = 74/218 (33%), Positives = 118/218 (54%)
Query: 37 SCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ +++++TP +V YLVLDEAD++ E G + I ++ SN
Sbjct: 272 TANVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKG-FEEDIKTIISNTSNSERQ 330
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALR 152
+F+AT P V ELA + M+ V+V VG ++ +A++ I Q +++ +E KL+ L
Sbjct: 331 TLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLL 390
Query: 153 QSFA--ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ + ES + +LIF K+ A + L + IH DLSQ QR A+ F++G+
Sbjct: 391 RKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQ 450
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 451 SNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRI 488
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 290 (107.1 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 76/252 (30%), Positives = 125/252 (49%)
Query: 1 LATQTTRECKKLA-KGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXX 59
LA Q EC K KG K + ++ DI+I+TP
Sbjct: 326 LALQVEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINL 385
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
+ YL +EAD++ ++G + + ++ P + SAT PD V LA+S + +
Sbjct: 386 KSITYLA-NEADRMLDMGFEPQIMKILIDV--RPDRQTVMMSATWPDGVRRLAKSYLRNP 442
Query: 120 VRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERAKEL 176
+ V VG + A+ +++QK++ EE K A ++F +S+ P +IFV K A ++
Sbjct: 443 MIVYVGTLDLAAVNTVEQKVIVINEEEKK--AFMENFIDSMKPKDKAIIFVGKKSTADDI 500
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L G+ +H D Q RE A+DDF+ GK +L+ATD+ +RG+D + V N+D
Sbjct: 501 ASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFD 560
Query: 237 FPDSGAAYIHRI 248
FP + Y+HR+
Sbjct: 561 FPRNIEEYVHRV 572
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 291 (107.5 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 81/258 (31%), Positives = 131/258 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXXX 58
LATQ E K K +K + + L + DI+++TP
Sbjct: 313 LATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRIS 372
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN--PSIVRSL-FSATLPDFVEELARSI 115
+V YLVLDEAD++ ++G +P ++ N P+ ++L ++AT P V ++A +
Sbjct: 373 LHQVSYLVLDEADRMLDMG-----FEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADL 427
Query: 116 MHDAVRVIVGRKN--TASESIKQKL-VFAGSEEGKLLALRQSFAESLNP--PVLIFVQSK 170
+ + +V +G + A++SI Q + V A E+ L + S P ++IF +K
Sbjct: 428 LVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRL---EQILRSQEPGSKIIIFCSTK 484
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
+L L A IH D SQ +R++ ++ FR+G+T VL+ATDV ARG+D K +
Sbjct: 485 RMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIR 543
Query: 231 CVINYDFPDSGAAYIHRI 248
V+NYDFP+ Y+HRI
Sbjct: 544 VVVNYDFPNGVEDYVHRI 561
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 293 (108.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 78/251 (31%), Positives = 119/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 516 SNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 293 (108.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 78/251 (31%), Positives = 119/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 516 NNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 293 (108.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 78/251 (31%), Positives = 119/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 516 NNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 293 (108.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 78/251 (31%), Positives = 119/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 516 NNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 288 (106.4 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 72/223 (32%), Positives = 115/223 (51%)
Query: 29 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 88
++ DL + DI+++TP + YLVLDEAD++ ++G I ++
Sbjct: 245 QARDLER-GVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMG-FEPQIKKIIG 302
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEE 145
P +FSAT P V LA DA + VG A+ +I Q ++ +++
Sbjct: 303 QI-RPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQ 361
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+ L +IFV++K +A EL + DG IH D +Q +R+ + +
Sbjct: 362 AKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQE 421
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+AGKT +++ATDV ARG+D + VINYD+P++ Y+HRI
Sbjct: 422 FKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRI 464
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 284 (105.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 1 LATQTTRECKK-LAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q T E KK L + + + +++ + K + I+++TP
Sbjct: 85 LALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETI 144
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
S + +VLDEAD++ G L I+ ++ S LFSAT+P +++LA+ M
Sbjct: 145 DLSNLSTIVLDEADQMLYFG-FLYDIEDILDETPG-SKQTMLFSATIPKDIKKLAKRYMD 202
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVL--IFVQSKERAKE 175
+ + V + ++I+Q+++ ++ K ALR F + P L IF ++K RA +
Sbjct: 203 EPQMIQVQSEEVTVDTIEQRVIET-TDRAKPDALR--FVMDRDQPFLAVIFCRTKVRASK 259
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
LY L G +H D+ Q +RE + FR K LIATDV ARG+D GV V NY
Sbjct: 260 LYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNY 319
Query: 236 DFPDSGAAYIHRI 248
D P+ +YIHRI
Sbjct: 320 DIPEDVESYIHRI 332
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 284 (105.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 81/253 (32%), Positives = 126/253 (49%)
Query: 1 LATQTTRECKK-LAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q T E KK L + + + +++ + K + I+++TP
Sbjct: 85 LALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETI 144
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
S + +VLDEAD++ G L I+ ++ S LFSAT+P +++LA+ M
Sbjct: 145 DLSNLSTIVLDEADQMLYFG-FLYDIEDILDETPG-SKQTMLFSATIPKDIKKLAKRYMD 202
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVL--IFVQSKERAKE 175
+ + V + ++I+Q+++ ++ K ALR F + P L IF ++K RA +
Sbjct: 203 EPQMIQVQSEEVTVDTIEQRVIET-TDRAKPDALR--FVMDRDQPFLAVIFCRTKVRASK 259
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
LY L G +H D+ Q +RE + FR K LIATDV ARG+D GV V NY
Sbjct: 260 LYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNY 319
Query: 236 DFPDSGAAYIHRI 248
D P+ +YIHRI
Sbjct: 320 DIPEDVESYIHRI 332
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 66/209 (31%), Positives = 115/209 (55%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
+++ TP ++ LVLDEAD++ ++G + I+ +++ + P +L
Sbjct: 127 VIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMG-FIDDIEWILEH-TPPQRQLAL 184
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
FSAT+P+ ++ +A + +A + + +T +SI+Q+ V S+ KL AL +
Sbjct: 185 FSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQV-SQHNKLEALVRVLEVEN 243
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
++IFV+++ EL +L G + +H D++Q RE AV+ + GK +LIATDV
Sbjct: 244 TEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDV 303
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ARG+D + + V+NYD P AY+HRI
Sbjct: 304 AARGLDVERIGHVVNYDIPYDTEAYVHRI 332
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 75/218 (34%), Positives = 110/218 (50%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ C ILI+TP YLVLDEAD++ ++G I +V+ PS
Sbjct: 364 RLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMG-FEPQIRQIVECNRMPS 422
Query: 95 I---VRSLFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
+ ++FSAT P ++ LA+ + + V + VGR + SE+I QK+V+ +E +
Sbjct: 423 KEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYL 482
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ A + L+FV++K A +L L IH DL Q +RE +D FR G
Sbjct: 483 MDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGT 542
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 543 APILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRI 580
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 76/213 (35%), Positives = 114/213 (53%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
+I I+TP R YLVLDEAD++ ++G I +V P
Sbjct: 217 EICIATPGRIDFLESGKTNLR-RCTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTL 273
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KLLALRQSF 155
++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL+ L +
Sbjct: 274 MWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEI 333
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+IFV++K R +L + DG A IH D SQ +R+ +++FR+GK +LI
Sbjct: 334 MAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 393
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV +RG+D + V VINYD+P+S Y+HRI
Sbjct: 394 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRI 426
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 81/254 (31%), Positives = 128/254 (50%)
Query: 1 LATQTTRECKKLAKGNKFQ--IKLMKKELVRST-DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q E +K + ++ + + + V+ DL + C +L++TP
Sbjct: 271 LAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLER-GCHLLVATPGRLVDMMERGKI 329
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRS--LFSATLPDFVEELARS 114
+YLVLDEAD++ ++G I +V+ + P VR +FSAT P ++ LAR
Sbjct: 330 GLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARD 388
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ + + + VGR + SE+I QK+V+ + + L A + L+FV++K+ A
Sbjct: 389 FLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGAD 448
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L L + IH D SQ RE A+ FR+G+ +L+AT V ARG+D V VIN
Sbjct: 449 SLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVIN 508
Query: 235 YDFPDSGAAYIHRI 248
+D P Y+HRI
Sbjct: 509 FDLPSDIEEYVHRI 522
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 289 (106.8 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 81/254 (31%), Positives = 128/254 (50%)
Query: 1 LATQTTRECKKLAKGNKFQ--IKLMKKELVRST-DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q E +K + ++ + + + V+ DL + C +L++TP
Sbjct: 277 LAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLER-GCHLLVATPGRLVDMMERGKI 335
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRS--LFSATLPDFVEELARS 114
+YLVLDEAD++ ++G I +V+ + P VR +FSAT P ++ LAR
Sbjct: 336 GLDFCKYLVLDEADRMLDMG-FEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARD 394
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ + + + VGR + SE+I QK+V+ + + L A + L+FV++K+ A
Sbjct: 395 FLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGAD 454
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L L + IH D SQ RE A+ FR+G+ +L+AT V ARG+D V VIN
Sbjct: 455 SLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVIN 514
Query: 235 YDFPDSGAAYIHRI 248
+D P Y+HRI
Sbjct: 515 FDLPSDIEEYVHRI 528
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 289 (106.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 270 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 326
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 327 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 386
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R+ +++F+
Sbjct: 387 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 446
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 447 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 486
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP +E +VLDEAD++ ++G ++ I+ ++ C +
Sbjct: 125 DVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG-FIESINKIID-CLPSEVQFL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSATL V ELA++ + D + + + +I Q L+ ++ K L E
Sbjct: 183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKDTKSALLSHLINEQ 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIF+++K A +L +L GI A HS SQ R ++DF++GK L+AT
Sbjct: 242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATG 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D ++ V+NYD P Y+HRI
Sbjct: 302 VAARGIDIDQLSRVVNYDLPFPADEYVHRI 331
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 67/210 (31%), Positives = 107/210 (50%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP +E +VLDEAD++ ++G ++ I+ ++ C +
Sbjct: 125 DVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMG-FIESINKIID-CLPSEVQFL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSATL V ELA++ + D + + + +I Q L+ ++ K L E
Sbjct: 183 LFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKDTKSALLSHLINEQ 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIF+++K A +L +L GI A HS SQ R ++DF++GK L+AT
Sbjct: 242 QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATG 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V ARG+D ++ V+NYD P Y+HRI
Sbjct: 302 VAARGIDIDQLSRVVNYDLPFPADEYVHRI 331
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 289 (106.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 75/221 (33%), Positives = 114/221 (51%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
D+ K C+IL +TP S++ YLVLDEAD++ ++G I+ ++
Sbjct: 397 DVEK-GCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMG-FAPEIEKLMTKPG 454
Query: 92 NPSIVRS---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGK 147
P+ + +FSAT P+ + LA + + + + V+VG A + Q V E GK
Sbjct: 455 MPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACSDVAQT-VLEMRENGK 513
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
+ L + S +IFV +K++A + G L + + IH D Q QRE+A+ DFR
Sbjct: 514 MEKLLEILKSSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFR 573
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK V++ T V ARG+D + V VINYD P Y+HRI
Sbjct: 574 TGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRI 614
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 287 (106.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 75/227 (33%), Positives = 123/227 (54%)
Query: 30 STDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG------NLLKHI 83
S LS+ CDIL++TP +VE LVLDEADK+ ++G N+L +
Sbjct: 304 SFSLSE-GCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKV 362
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAG 142
D + A S + +F+AT+ +E++A M V +G + T SE + Q++V +A
Sbjct: 363 D--INADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVE-TGSEPLIQQVVEYAD 419
Query: 143 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFD-GIRAGVIHSDLSQTQREN 201
++E K L+ A+ +PP++IF+ K+ A L + + ++ ++H SQ QRE+
Sbjct: 420 NDEDKFKKLKPIVAK-YDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREH 478
Query: 202 AVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ FR K ++IAT+V ARG+D V+ V+N+ YIHRI
Sbjct: 479 SLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRI 525
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 288 (106.4 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 78/222 (35%), Positives = 117/222 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 211 DLER-GVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 267
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEEG-KL 148
P ++SAT P V +LA + D ++ VG +A+ +I Q + V SE+ KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D SQ +R+ +++FR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 209 GKTWVLIATDVIARGMDF--KGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+ F + V VINYD+P+S Y+HRI
Sbjct: 388 GKAPILIATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRI 429
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 287 (106.1 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 70/211 (33%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
I+++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 315 IMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 371
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 372 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 429
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 430 T-PPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 488
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 489 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 519
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 286 (105.7 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 69/216 (31%), Positives = 111/216 (51%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSN 92
K ++++TP YL LDEAD++ ++G ++ I K
Sbjct: 307 KHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QR 365
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
++ LFSAT+P ++ A+S + + + VGR AS + Q++ + EE K++ L
Sbjct: 366 QTL---LFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYV-KEEAKMVYLL 421
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ ++ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK
Sbjct: 422 ECLQKT-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKD 480
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATDV ++G+DF + VINYD P+ Y+HRI
Sbjct: 481 VLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRI 516
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 286 (105.7 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 72/218 (33%), Positives = 115/218 (52%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-V 96
CDIL++TP + +L LDEAD++ ++G I +V+ P V
Sbjct: 280 CDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMG-FEPQIRKIVEQMDMPPRGV 338
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALR 152
R LFSAT P ++ LA M + + + VGR ++++ I Q++ F + + L+ L
Sbjct: 339 RQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLL 398
Query: 153 QSFAESLNPP--VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ E+ + L+FV++K A L L + A IH D +Q +RE A+ F+ G+
Sbjct: 399 HAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGR 458
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T +L+ATDV ARG+D V V+N+D P+ Y+HRI
Sbjct: 459 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 289 (106.8 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 78/251 (31%), Positives = 119/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + VINYD
Sbjct: 516 NNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 288 (106.4 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 72/223 (32%), Positives = 118/223 (52%)
Query: 29 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 88
++ DL + +I+I+TP R YLVLDEAD++ ++G I +++
Sbjct: 273 QARDLER-GVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG-FEPQIRKIMQ 330
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEG- 146
P ++SAT P V +LA +++ ++V +G + +A+ +I Q + E
Sbjct: 331 QI-RPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKL 389
Query: 147 -KLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+ L + +IFV++K+R E+ ++ G RA IH D SQ +R+ +
Sbjct: 390 MKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSS 449
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G+ +L+ATDV ARG+D V VINYD+P + Y+HRI
Sbjct: 450 FRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRI 492
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 289 (106.8 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 71/211 (33%), Positives = 107/211 (50%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
+I++ TP RV YLV DEAD++F++G ++ + + P
Sbjct: 378 EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTL 435
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE- 157
LFSAT +E+LAR I+ D +RV+ G A+E + Q + S K L + E
Sbjct: 436 LFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEF 495
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ + VL+FV K A+EL L +G G++H D+ Q++R + DF+ VL+AT
Sbjct: 496 TSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVAT 555
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+D + VINYD + HRI
Sbjct: 556 DVAARGLDIPSIKTVINYDVARDIDTHTHRI 586
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 285 (105.4 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 73/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 201 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 257
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + + V + +G +A+ +I Q + ++ KL
Sbjct: 258 RPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKL 317
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R +L ++ DG A IH D SQ +R+ +++F+
Sbjct: 318 IRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 377
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 378 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 417
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 285 (105.4 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 73/220 (33%), Positives = 115/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 209 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 265
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + + V + +G +A+ +I Q + ++ KL
Sbjct: 266 RPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKL 325
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R +L ++ DG A IH D SQ +R+ +++F+
Sbjct: 326 IRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 385
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 386 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 425
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 285 (105.4 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 74/220 (33%), Positives = 114/220 (51%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 213 DLER-GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI- 269
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKL 148
P ++SAT P V +LA + D + + +G +A+ +I Q + ++ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + ++FV++K R EL ++ DG A IH D SQ +R +++F+
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKH 389
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VINYD+P+S YIHRI
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 285 (105.4 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 73/220 (33%), Positives = 116/220 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + +I I+TP R YLVLDEAD++ ++G I +V
Sbjct: 215 DLER-GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG-FEPQIRKIVDQI- 271
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFA--GSEEGKL 148
P ++SAT P V +LA + + +++ VG +A+ +I Q + G +E KL
Sbjct: 272 RPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKL 331
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L + +IFV++K R +L + DG A IH D +Q +R+ +++F+
Sbjct: 332 IRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKY 391
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +LIATDV +RG+D + V VIN+D+P++ YIHRI
Sbjct: 392 GKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRI 431
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 289 (106.8 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 82/260 (31%), Positives = 125/260 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q RECK K + ++ K +I++ TP
Sbjct: 503 LAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGR 562
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ R YLVLDEAD++F++G +P V++ +N P LFSAT P +E LA
Sbjct: 563 VTNLHRCTYLVLDEADRMFDLG-----FEPQVMRIINNIRPDRQTVLFSATFPRAMEALA 617
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPV----LIFVQ 168
R ++ V + VG ++ + ++Q +V EE K L + E N + L+FV
Sbjct: 618 RKVLKKPVEITVGGRSVVASEVEQ-IVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVD 676
Query: 169 SKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+E A L +L G + IH Q R++ + D++AG VLIAT V+ARG+D K
Sbjct: 677 RQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKS 736
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+ V+NYD P+ Y+HR+
Sbjct: 737 LQLVVNYDCPNHMEDYVHRV 756
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 68/211 (32%), Positives = 102/211 (48%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C +++ TP ++ VLDEAD++ G I V K P +
Sbjct: 149 CHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRG-FKDQIQDVFKMLP-PDVQV 206
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
L SAT+P V E++R M D V ++V ++ E IKQ V E KL L +
Sbjct: 207 ILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDT 266
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+IF ++ + +L E++ +H D+ Q RE + FR+G + VLI T
Sbjct: 267 LSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITT 326
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
D++ARG+D + V+ VINYD P + YIHRI
Sbjct: 327 DLLARGIDVQQVSLVINYDLPSNRENYIHRI 357
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 83/256 (32%), Positives = 122/256 (47%)
Query: 1 LATQTTRECKKLA---KGNKFQI---KLMKKELVRSTDLSKFSCDILISTPXXXXXXXXX 54
LA+Q + K L N F I K +K +L + + K C + TP
Sbjct: 103 LASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKK---MQKHGCQAVSGTPGRVLDMIKK 159
Query: 55 XXXXXSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
V+ LVLDEAD+L +G + D K N +V + SAT+ + E+
Sbjct: 160 QMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVV--VVSATMNKDILEVT 217
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
R M+D V+++V R + E IKQ +V EE K L + +IF +K++
Sbjct: 218 RKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKK 277
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L L +H D+ Q +R+ ++DFR G + VLI+TDV ARG+D + V+ V
Sbjct: 278 VDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLV 337
Query: 233 INYDFPDSGAAYIHRI 248
INYD P+ YIHRI
Sbjct: 338 INYDLPEIIENYIHRI 353
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 285 (105.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 489
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 490 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 285 (105.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 489
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 490 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 285 (105.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 489
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 490 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 285 (105.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 489
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 490 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 285 (105.4 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 316 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 372
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 373 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 430
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 431 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 489
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 490 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 520
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 285 (105.4 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 334 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 390
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 391 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 448
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 449 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 507
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 508 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 538
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 283 (104.7 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 71/219 (32%), Positives = 115/219 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKA 89
D+ K I+++TP L LDEAD+L ++G + ++H+ K+
Sbjct: 224 DVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKS 283
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 149
++ LFSAT+P ++ A S + V V VGR A+ + Q++ + +E K++
Sbjct: 284 -QRQTL---LFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYV-KQEAKIV 338
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
L + ++ PPVLIF ++K +++ L G+ A IH Q R+ A+ F+AG
Sbjct: 339 YLLECLQKT-TPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAG 397
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
K VL+ATDV ++G+DF + VINYD P Y+HRI
Sbjct: 398 KKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRI 436
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 285 (105.4 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 74/219 (33%), Positives = 116/219 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VR 97
DIL++TP V +L LDEAD++ ++G I +V+ P VR
Sbjct: 276 DILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMG-FEPQIRKIVQQMDMPPPGVR 334
Query: 98 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----LL- 149
LFSAT P ++ LA + + + + VGR ++++ I Q++ F + + LL
Sbjct: 335 QTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLH 394
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
A R++ + L+FV++K+ A L L +G A IH D SQ +RE A+ F+ G
Sbjct: 395 AQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTG 454
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+T +L+ATDV ARG+D V V+N+D P+ Y+HRI
Sbjct: 455 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 493
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 285 (105.4 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 69/211 (32%), Positives = 110/211 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
++++TP YL LDEAD++ ++G ++ I K ++
Sbjct: 343 MMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG-QRQTL-- 399
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + V + VGR AS + Q++ + EE K++ L + +
Sbjct: 400 -LFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQK 457
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF + K ++ L G+ A IH Q +R A++ FR GK VL+AT
Sbjct: 458 T-PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVAT 516
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P+ Y+HRI
Sbjct: 517 DVASKGLDFPAIQHVINYDMPEEIENYVHRI 547
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 284 (105.0 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 71/211 (33%), Positives = 113/211 (53%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
I+++TP YLVLDEAD++ ++G + +K I KA ++
Sbjct: 325 IVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKA-QRQTL-- 381
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++ A+S + + V VGR AS ++ Q+L F SE KL+ + + +
Sbjct: 382 -LFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSEN-KLVRVLECLQK 439
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ +P VLIF + K +Y L G+ IH Q+ R ++ FR + VL+AT
Sbjct: 440 T-SPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVAT 498
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF+G+ VIN+D P+ Y+HRI
Sbjct: 499 DVASKGLDFQGIEHVINFDMPEDIENYVHRI 529
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 279 (103.3 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 63/185 (34%), Positives = 101/185 (54%)
Query: 64 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 123
YL LDEAD++ ++G + I + LFSAT+P ++ A+S + + +
Sbjct: 191 YLALDEADRMIDMG-FEEDIRTIFSYFKGQRQTL-LFSATMPKKIQNFAKSALVKPITIN 248
Query: 124 VGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFD 183
VGR AS + Q++ + EE K++ L + ++ PPVLIF + K ++ L
Sbjct: 249 VGRAGAASLDVIQEVEYV-KEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYLLLK 306
Query: 184 GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAA 243
G+ A IH Q +R A++ F+ GK VL+ATDV ++G+DF + V+NYD P+
Sbjct: 307 GVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIEN 366
Query: 244 YIHRI 248
Y+HRI
Sbjct: 367 YVHRI 371
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 283 (104.7 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 83/255 (32%), Positives = 126/255 (49%)
Query: 1 LATQTTRECKKLA-KGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXX 59
LA Q EC K + KG + + K DI+I+TP
Sbjct: 328 LALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNL 387
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELARSIM 116
+ YLVLDEADK+ ++G +P ++K + P + SAT P V LA+S +
Sbjct: 388 KNITYLVLDEADKMLDMG-----FEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYL 442
Query: 117 HDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKERA 173
+ + V VG + A S+KQ ++ +EE K + Q+F +S++ V++FV K A
Sbjct: 443 KEPMIVYVGTLDLVAVSSVKQNIIVT-TEEEKWSHM-QTFLQSMSSTDKVIVFVSRKAVA 500
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L +L I +H D Q RE A+++F+ GK +LIATD+ +RG+D V V
Sbjct: 501 DHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVY 560
Query: 234 NYDFPDSGAAYIHRI 248
N+DFP + Y+HRI
Sbjct: 561 NFDFPRNIEEYVHRI 575
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 284 (105.0 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 72/213 (33%), Positives = 111/213 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXX-SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DI+I+TP +E +V+DEAD++ E G ++ +++AC S
Sbjct: 382 DIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDG-FADELNEIIQACPK-SRQT 439
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA- 156
LFSAT+ D V++L R ++ VRV V K T ++ + Q+ V + L +
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLRPAMLIYLC 499
Query: 157 -ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E + +IF +SK A ++ + A IH LSQ QR A++DFR GK L+
Sbjct: 500 KELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLL 559
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV +RG+D KG+ VINY+ P + Y+HR+
Sbjct: 560 ATDVASRGIDIKGIEVVINYEAPATHEVYLHRV 592
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 282 (104.3 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 71/210 (33%), Positives = 110/210 (52%)
Query: 42 ISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFS 101
I+TP R YLVLDEAD++ ++G I +V P ++S
Sbjct: 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG-FEPQIRKIVDQI-RPDRQTLMWS 279
Query: 102 ATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAES 158
AT P V +LA + D + + +G +A+ +I Q + ++ KL+ L +
Sbjct: 280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
++FV++K R EL ++ DG A IH D SQ +R+ +++F+ GK +LIATD
Sbjct: 340 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V +RG+D + V VINYD+P+S YIHRI
Sbjct: 400 VASRGLDVEDVKFVINYDYPNSSEDYIHRI 429
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 282 (104.3 bits), Expect = 7.7e-24, P = 7.7e-24
Identities = 85/256 (33%), Positives = 128/256 (50%)
Query: 1 LATQTTRECKKLA-KGNKFQIKLMKKELV-RSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q EC K + KG K + + DL K DI+I+TP
Sbjct: 330 LALQVEAECSKYSYKGLKSVCVYGGGDRDGQIKDLLK-GVDIIIATPGRLNDLQMNNFVY 388
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELARSI 115
+ YLVLDEADK+ ++G +P ++K + P + SAT P V LA+S
Sbjct: 389 LKSISYLVLDEADKMLDMG-----FEPQIMKILLDIRPDRQTVMTSATWPYAVRRLAQSY 443
Query: 116 MHDAVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKER 172
+ + + V VG + A ++KQ ++ +E + + Q+F ES++P V+IFV K
Sbjct: 444 LKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKR--SHIQTFIESMSPKDKVIIFVSRKAV 501
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A L +L I +H + Q RE A+ +F+ GK +LIATD+ +RG+D V V
Sbjct: 502 ADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHV 561
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HR+
Sbjct: 562 YNYDFPRNIEEYVHRV 577
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 285 (105.4 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 69/228 (30%), Positives = 125/228 (54%)
Query: 29 RSTDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVK 88
++ DL + +++I+TP R YLVLDEAD++ ++G I +++
Sbjct: 355 QARDLDR-GVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIE 412
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEG- 146
P ++SAT P V+ LA ++D +++ +G N +A+ +I+Q + E
Sbjct: 413 QI-RPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKP 471
Query: 147 -KLLALRQSFAESLNP-----PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRE 200
+L+ L + N +++FV++K + +++ + +G A IH D +Q +R+
Sbjct: 472 QRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERD 531
Query: 201 NAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ + DFR GK+ +LIATDV +RG+D + + VINYD+P+S Y+HRI
Sbjct: 532 SVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRI 579
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 283 (104.7 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 77/253 (30%), Positives = 127/253 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q E K ++ + + T ++ K +I+I+TP
Sbjct: 469 LALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTN 528
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLVLDEAD++ ++G I ++ P +FSAT P V+ LA + D
Sbjct: 529 LRRVTYLVLDEADRMLDMG-FEPQIRKIISQI-RPDRQTLMFSATWPKEVQALAHDFLTD 586
Query: 119 AVRVIVGRKN-TASESIKQKLVFAGSEEGKLLALRQSFAESL--NPPVLIFVQSKERAKE 175
++V +G TA+ +++Q + E K L SF S+ + V++F ++++ +
Sbjct: 587 HIQVHIGSTEITANHNVRQIVEVCQDFEKKERML--SFLGSVGRDEKVIVFAETRKGVDD 644
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L L F G ++ IH + SQ +R+ + F+ G ++IATDV +RG+D K + V+NY
Sbjct: 645 LQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNY 704
Query: 236 DFPDSGAAYIHRI 248
DFP++ YIHRI
Sbjct: 705 DFPNTIEVYIHRI 717
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 234 (87.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 54/150 (36%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT+P VE+L++ + + +G + I+Q ++F SE K L Q +
Sbjct: 620 LFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKDG 679
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
PP++IFV K+ + L + ++HS SQ QRE A++ F+ K VLIAT
Sbjct: 680 PPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATG 739
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V +RG+ GV VIN+D P + Y HRI
Sbjct: 740 VASRGIHVDGVTHVINFDIPKNIEDYTHRI 769
Score = 75 (31.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 1 LATQTTRECKKLAKGNKFQI-KLMKKELV--RSTDLSKFSCDILISTPXXXXXXXXXXXX 57
L Q +E + A+ F++ L+ + + ++ +SK C+I+I+TP
Sbjct: 501 LVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSK-GCEIIIATPGRLNDCLEKRYL 559
Query: 58 XXSRVEYLVLDEADKLFEVG 77
++ Y+VLDEAD + ++G
Sbjct: 560 VLNQCNYIVLDEADMMIDLG 579
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 274 (101.5 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 79/253 (31%), Positives = 126/253 (49%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK-ELVRSTDLS-KFSCDILISTPXXXXXXXXXXXXX 58
LA Q R+ ++AK ++ ++ E S L + DILI T
Sbjct: 93 LAIQIHRDATEMAKSTGLRLGVVYGGEGYESQRLELEAGVDILIGTCGRLIDYMKQGIYN 152
Query: 59 XSRVEYLVLDEADKLFEVGNL--LKHI-DPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+E +VLDEAD++F++G + ++++ D + A S+ LFSATL V+ELA
Sbjct: 153 LKNIEVIVLDEADRMFDLGFIKDIRYMFDKMPPATERLSM---LFSATLSFRVKELAFDH 209
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
M+D V V + + I ++L F S E K+ L+ E ++F +K ++
Sbjct: 210 MNDPTSVEVEPEQKTNSRISEEL-FYPSNEDKMTLLQTLIEEDWPEKAIVFANTKHVCEK 268
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
++ L D IR G++ D+ Q +R +++F G +L+ATDV ARG+ V V NY
Sbjct: 269 VFDHLNADKIRVGLLTGDVPQKKRLKILEEFTDGTVDILVATDVAARGLHIPSVTHVFNY 328
Query: 236 DFPDSGAAYIHRI 248
D PD Y+HRI
Sbjct: 329 DLPDDCQDYVHRI 341
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 275 (101.9 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 69/210 (32%), Positives = 112/210 (53%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
IL++TP +VE L+LDEAD++ ++G + + + K + PS ++L
Sbjct: 133 ILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLG-FIHALRAIAK--NVPSKRQTL 189
Query: 100 F-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
F SAT+P VE LA + + + V V T + I+Q++ F E L + +
Sbjct: 190 FFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLIEKIRDPE 249
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
L + +F ++K A + LA I + IH + SQ+QRE A++ F+AG+ +L+ATD
Sbjct: 250 LRSAI-VFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATD 308
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+ + VINYD PD ++HRI
Sbjct: 309 IAARGIHVDALTHVINYDLPDVPEQFVHRI 338
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 80/257 (31%), Positives = 130/257 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 517 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 571
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLALRQSFAESLNPPVLIFVQSK 170
R I+ + V VG ++ ++Q+++ E+ KLL L + ES + V+IFV +
Sbjct: 572 RRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS--VIIFVDKQ 629
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
Query: 231 CVINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 LVVNYSCPNHYEDYVHR 706
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 275 (101.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 74/254 (29%), Positives = 123/254 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXXS 60
LA QT +++ K K +L+ + + + +++ TP
Sbjct: 174 LARQTLEVVQEMGKFTKITSQLIVPDSFEKN--KQINAQVIVGTPGTVLDLMRRKLMQLQ 231
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+++ VLDEAD + + L V + + + LFSAT D V + A+ I+ +A
Sbjct: 232 KIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQL-VLFSATFADAVRQYAKKIVPNAN 290
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
+ + ++IKQ + +E K L + + +IFV +K+ A LYG+L
Sbjct: 291 TLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKL 350
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD- 239
+G ++H DL +R+ +DDFR G++ VLI T+V+ARG+D V+ V+NYD P
Sbjct: 351 KSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTL 410
Query: 240 -SG----AAYIHRI 248
+G A YIHRI
Sbjct: 411 ANGQADPATYIHRI 424
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 283 (104.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 86/261 (32%), Positives = 127/261 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LATQ ++CK K + ++ K +I++ TP
Sbjct: 626 LATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGR 685
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V+K SN P LFSAT P +E LA
Sbjct: 686 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMKILSNVRPDRQTVLFSATFPRNMEALA 740
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ------SFAESLNPPVLIF 166
R + + ++VG ++ + I Q +V +EE K + L + S E+ + LIF
Sbjct: 741 RKTLTKPIEIVVGGRSVVAPEITQ-IVEVCNEEKKFVRLLELLGNLYSTDENEDARSLIF 799
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V +E A L EL G IH Q R++ ++DF+AG VLIAT V ARG+D
Sbjct: 800 VDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDV 859
Query: 227 KGVNCVINYDFPDSGAAYIHR 247
K + V+NYD P+ Y+HR
Sbjct: 860 KQLKLVVNYDAPNHLEDYVHR 880
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 66/209 (31%), Positives = 106/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP +++ +LDEAD++ G + I + P+ L
Sbjct: 142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSG-FKEQIYQIFTLLP-PTTQVVL 199
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P+ V E+ M + VR++V + E IKQ V EE K L +
Sbjct: 200 LSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSIS 259
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF ++ + +EL +L D I+SDL Q +R+ + +FR+G + +LI+TD+
Sbjct: 260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDL 319
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 320 LARGIDVQQVSLVINYDLPANKENYIHRI 348
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 66/209 (31%), Positives = 106/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP +++ +LDEAD++ G + I + P+ L
Sbjct: 142 IVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSG-FKEQIYQIFTLLP-PTTQVVL 199
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P+ V E+ M + VR++V + E IKQ V EE K L +
Sbjct: 200 LSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSIS 259
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF ++ + +EL +L D I+SDL Q +R+ + +FR+G + +LI+TD+
Sbjct: 260 VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDL 319
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 320 LARGIDVQQVSLVINYDLPANKENYIHRI 348
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 277 (102.6 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 67/211 (31%), Positives = 108/211 (51%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSIVR- 97
+++ TP SRV++LVLDEAD++ +G D V + S P +
Sbjct: 135 VVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMG----FADDVERILSETPEYKQV 190
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
+LFSAT+P + +L+ +HD V K +E+I Q + K+ AL +
Sbjct: 191 ALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEV 247
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+++FV++K+ +E+ +L G A I D+ Q QRE + R G +L+AT
Sbjct: 248 EPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVAT 307
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+D + ++ V+NYD P +Y+HRI
Sbjct: 308 DVAARGLDVERISHVLNYDIPHDTESYVHRI 338
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 279 (103.3 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 389 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 447
Query: 98 S---LFSATLPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
LFSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 448 RQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEI 507
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 508 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 564
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 565 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 601
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 281 (104.0 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 76/251 (30%), Positives = 117/251 (46%)
Query: 1 LATQTTRECKKLAK--GNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K G + + + +I++ TP
Sbjct: 342 LCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATS 401
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV +LV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 402 LQRVTFLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVD 459
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAKELY 177
+RV+ G A+E I Q + S + K L + E + VL+FV K +EL
Sbjct: 460 PIRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELA 519
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L +G G++H D+ Q++R + DF+ VL+ATDV ARG+D + V+NYD
Sbjct: 520 TNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDV 579
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 580 ARDIDTHTHRI 590
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 278 (102.9 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 80/259 (30%), Positives = 130/259 (50%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA+Q E KK + G K + + + + DIL++TP
Sbjct: 249 LASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVS 308
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-VRS--LFSATLPDFVEELARSI 115
+ +L LDEAD++ ++G I +V+ P VR LFSAT P ++ LA
Sbjct: 309 MQMIRFLALDEADRMLDMG-FEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADF 367
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----LL-ALRQSFAESLNPPVLIFVQS 169
+ + + + VGR ++++ I Q++ F + + LL A R++ + L+FV++
Sbjct: 368 LANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVET 427
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
K A L L +G A IH D +Q +RE A+ F++G+T +L+ATDV ARG+D V
Sbjct: 428 KRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHV 487
Query: 230 NCVINYDFPDSGAAYIHRI 248
V+N+D P+ Y+HRI
Sbjct: 488 AHVVNFDLPNDIDDYVHRI 506
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 278 (102.9 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 75/222 (33%), Positives = 115/222 (51%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDP-VVKAC 90
DLSK DI+I+TP + YLVLDEADK+ ++G +P ++K
Sbjct: 360 DLSK-GADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMG-----FEPQIMKIL 413
Query: 91 SN--PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
+ P + SAT P V LA+S + + + V VG + + S + + +E+ K
Sbjct: 414 LDVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKR 473
Query: 149 LALRQSFAESLNPP--VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDF 206
+ Q+F +S++P V+IFV K A L +L I +H + Q+ RE A+ F
Sbjct: 474 SHI-QAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSF 532
Query: 207 RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ GK +LIATD+ +RG+D V V NYDFP + Y+HR+
Sbjct: 533 KTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRV 574
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 276 (102.2 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP V+YLVLDEAD++ ++G L + ++ PS R
Sbjct: 295 CNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLD-MKKLISYPEMPSKDR 353
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ V+ LA + D + +++G A ++Q ++ S+ KL+ +
Sbjct: 354 RQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEI 413
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
QS ++FV +K++A L L + + + IH D Q +RE A+ DFR+GK
Sbjct: 414 LQSTG---GERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKC 470
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V +RG+D + V VIN+D P++ Y+HRI
Sbjct: 471 QILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRI 507
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 276 (102.2 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 75/256 (29%), Positives = 129/256 (50%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q E K K ++ + + + + DLS+ ++ I+TP
Sbjct: 210 LAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSR-GVEVCIATPGRLIDMLESGKT 268
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
RV YLVLDEAD++ ++G I ++ P ++SAT P V +A +
Sbjct: 269 NLRRVTYLVLDEADRMLDMG-FEPQIRKIIGQI-RPDRQTLMWSATWPKEVRNMAADFLQ 326
Query: 118 DAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKER 172
D ++V +G + +A+ I Q ++V + +++ + + + +LIFV +K
Sbjct: 327 DFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRV 386
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A E+ L DG A IH D Q +R+ +D F+ GK+ +++ATDV +RG+D + + V
Sbjct: 387 ADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHV 446
Query: 233 INYDFPDSGAAYIHRI 248
+NYD+P++ YIHRI
Sbjct: 447 LNYDYPNNSEDYIHRI 462
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 390 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 448
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
LFSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 449 RQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEI 508
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 509 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 565
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 566 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 602
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 66/209 (31%), Positives = 104/209 (49%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP +++ +LDEAD++ G + I + + + V L
Sbjct: 146 IVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRG-FTEQIYDIFQLLPQSTQV-VL 203
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ M D VR++V ++ E IKQ + EE KL L +
Sbjct: 204 LSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETVT 263
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF ++ + L +L +H D+ Q QR+ + +FR+G + VLIATD+
Sbjct: 264 ITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDL 323
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 324 LARGIDVQQVSLVINYDLPANRENYIHRI 352
>GENEDB_PFALCIPARUM|PF10_0209 [details] [associations]
symbol:PF10_0209 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014185 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 HSSP:P10081 RefSeq:XP_001347493.1
ProteinModelPortal:Q8IJI8 EnsemblProtists:PF10_0209:mRNA
GeneID:810366 KEGG:pfa:PF10_0209 EuPathDB:PlasmoDB:PF3D7_1021500
HOGENOM:HOG000284466 OMA:YNTICIS ProtClustDB:CLSZ2514698
Uniprot:Q8IJI8
Length = 680
Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 64/187 (34%), Positives = 104/187 (55%)
Query: 64 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 123
++V DE DKLFE+ L+ ++ ++K N I + +ATLP ++ ++ + V
Sbjct: 385 FIVFDEVDKLFEI-KFLEQVNTLLKEIQNRKIQKIFTTATLPGNIKNFISTLCPNYTVVY 443
Query: 124 VGRK-NTASESIKQKLVFAGSEEGKLLALRQSFA-ESLNPPVLIFVQSKERAKELYGELA 181
G+ NT + +IKQ+L++ +EE KLL L + ++ PVLIFV S +A +Y L
Sbjct: 444 FGKNINTINNNIKQELLYVNNEEEKLLVLNNLIKNKEIHIPVLIFVDSIIKANMIYTNLH 503
Query: 182 FDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSG 241
++ S+ S+ +R+ F+ G W LI TD+++RG+D KG+ VINYD
Sbjct: 504 KSVSYIALLTSEKSKEERKIIFQKFQQGHIWYLICTDILSRGIDIKGIETVINYDVCYDK 563
Query: 242 AAYIHRI 248
Y+HRI
Sbjct: 564 YNYMHRI 570
>UNIPROTKB|Q8IJI8 [details] [associations]
symbol:PF10_0209 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014185
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 HSSP:P10081 RefSeq:XP_001347493.1
ProteinModelPortal:Q8IJI8 EnsemblProtists:PF10_0209:mRNA
GeneID:810366 KEGG:pfa:PF10_0209 EuPathDB:PlasmoDB:PF3D7_1021500
HOGENOM:HOG000284466 OMA:YNTICIS ProtClustDB:CLSZ2514698
Uniprot:Q8IJI8
Length = 680
Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 64/187 (34%), Positives = 104/187 (55%)
Query: 64 YLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVI 123
++V DE DKLFE+ L+ ++ ++K N I + +ATLP ++ ++ + V
Sbjct: 385 FIVFDEVDKLFEI-KFLEQVNTLLKEIQNRKIQKIFTTATLPGNIKNFISTLCPNYTVVY 443
Query: 124 VGRK-NTASESIKQKLVFAGSEEGKLLALRQSFA-ESLNPPVLIFVQSKERAKELYGELA 181
G+ NT + +IKQ+L++ +EE KLL L + ++ PVLIFV S +A +Y L
Sbjct: 444 FGKNINTINNNIKQELLYVNNEEEKLLVLNNLIKNKEIHIPVLIFVDSIIKANMIYTNLH 503
Query: 182 FDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSG 241
++ S+ S+ +R+ F+ G W LI TD+++RG+D KG+ VINYD
Sbjct: 504 KSVSYIALLTSEKSKEERKIIFQKFQQGHIWYLICTDILSRGIDIKGIETVINYDVCYDK 563
Query: 242 AAYIHRI 248
Y+HRI
Sbjct: 564 YNYMHRI 570
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 276 (102.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 72/254 (28%), Positives = 130/254 (51%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPXXXXXXXXXXXX 57
LA Q E K K ++ + + + + DLS+ ++ I+TP
Sbjct: 225 LAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSR-GVEVCIATPGRLIDMLEAGRT 283
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
RV YLVLDEAD++ ++G I ++ P ++SAT P V +LA ++
Sbjct: 284 NLRRVTYLVLDEADRMLDMG-FEPQIRKIISQI-RPDRQTCMWSATWPKEVRQLASDFLN 341
Query: 118 DAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ ++V +G + +A+ I Q +++ + +++ + E+ L+F +K A
Sbjct: 342 NYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIAD 401
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ L DG A IH D Q +R+ +++F+ GK+ +++ATDV +RG+D + + VIN
Sbjct: 402 EITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVIN 461
Query: 235 YDFPDSGAAYIHRI 248
YD+P++ Y+HRI
Sbjct: 462 YDYPNNSEDYVHRI 475
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 276 (102.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP V+YLVLDEAD++ ++G L + ++ PS R
Sbjct: 295 CNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLD-MKKLISYPEMPSKDR 353
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ V+ LA + D + +++G A ++Q ++ S+ KL+ +
Sbjct: 354 RQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEI 413
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
QS ++FV +K++A L L + + + IH D Q +RE A+ DFR+GK
Sbjct: 414 LQSTG---GERTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKC 470
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V +RG+D + V VIN+D P++ Y+HRI
Sbjct: 471 QILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRI 507
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 269 (99.8 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 70/211 (33%), Positives = 109/211 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP ++ LVLDEAD++ ++G + I+ +++
Sbjct: 130 DILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMG-FIDDINKIIERLPEHR-QNL 187
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT+ + V LA+ +H V + +G + I+Q LV ++ AL +
Sbjct: 188 LFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTV--DKANKSALLSHIITT 245
Query: 159 LN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
N LIF+++K A +L +L GI A IHS +Q RE ++DF++GK L+AT
Sbjct: 246 QNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVAT 305
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+D ++ VINYD P YIHRI
Sbjct: 306 AIAARGLDIGELSRVINYDLPAQVDDYIHRI 336
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 278 (102.9 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 75/251 (29%), Positives = 118/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 333 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 392
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 393 LQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 450
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 451 PIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 510
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L + G++H D+ Q++R + +F+ +L+ATDV ARG+D + VINYD
Sbjct: 511 NNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDV 570
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 571 ARDIDTHTHRI 581
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 276 (102.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 87/262 (33%), Positives = 127/262 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-SKFSCDILISTPXXXXXXXXXXXXXX 59
LA QT L +G + ++ +S + + ++I TP
Sbjct: 248 LAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAAKNASVIIGTPGRLLDLINDGSIDC 307
Query: 60 SRVEYLVLDEADKLFEVG------NLLKHI-DPVVKACSNPSIVRSLFSATLPDFVEELA 112
S+V YLVLDEAD++ + G N++ H DP N S FSAT P+ V LA
Sbjct: 308 SQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPT----RNGSRQTVFFSATWPESVRALA 363
Query: 113 RSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGK--LL--ALRQSFAES-LNPPVLIF 166
+ + D V++ +G AS++I Q + K +L LR+ + + +LIF
Sbjct: 364 ATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIF 423
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V K+ A + G LA G IH D+SQ R A++DF++GK VL+ATDV ARG+D
Sbjct: 424 VLYKKEAARVEGTLARKYNVVG-IHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDI 482
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
V VIN FP + Y+HRI
Sbjct: 483 PKVQLVINVTFPLTIEDYVHRI 504
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 272 (100.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 66/211 (31%), Positives = 107/211 (50%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D +++TP SR+E LVLDEAD++ ++G +D + A ++P+ ++
Sbjct: 125 DFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMG-FSDDVDRI--AAASPATRQT 181
Query: 99 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
L F+AT+ + LA ++ + R+ + T E I+Q+L A K LR +
Sbjct: 182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLITD 241
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+IF +K A+ L EL G A +H D+ Q R + + G+ +L+AT
Sbjct: 242 ESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVAT 301
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+D G++ VIN+D P Y+HRI
Sbjct: 302 DVAARGLDVTGISHVINFDLPKFAEDYVHRI 332
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 272 (100.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 65/210 (30%), Positives = 111/210 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP ++E LVLDEAD++ ++G ++ I ++K
Sbjct: 125 DILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG-FIRDIHKILKLLPEKR-QNL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT + ELA+ ++++ V + V N+ + +++Q ++ + K L + E
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLVKLVKEG 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F+++K A L L G+ A IH + SQ R A+ DF+AG+ +L+ATD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+D + V+N++ P Y+HRI
Sbjct: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRI 331
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 272 (100.8 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 65/210 (30%), Positives = 111/210 (52%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP ++E LVLDEAD++ ++G ++ I ++K
Sbjct: 125 DILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMG-FIRDIHKILKLLPEKR-QNL 182
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT + ELA+ ++++ V + V N+ + +++Q ++ + K L + E
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDMLVKLVKEG 241
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
VL+F+++K A L L G+ A IH + SQ R A+ DF+AG+ +L+ATD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+D + V+N++ P Y+HRI
Sbjct: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRI 331
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 273 (101.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 73/250 (29%), Positives = 117/250 (46%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q + + + + + + K R K I++ TP
Sbjct: 84 LAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLS 143
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
R++YLV+DEAD++ +G + ++ ++ + LFSATLP+ VE L+R+ M+
Sbjct: 144 LERLKYLVIDEADEMLNMG-FIDQVEAIIDELPTKRMTM-LFSATLPEDVERLSRTYMNA 201
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAKELY 177
+ + ++ I+ L F EE KL +L + NP +IF +++E +Y
Sbjct: 202 PTHIEIKAAGITTDKIEHTL-FEVREEEKL-SLLKDVTTIENPDSCIIFCRTQENVDHVY 259
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L IH + Q R +DDFR GK L+ATDV ARG+D + VINYD
Sbjct: 260 RQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDI 319
Query: 238 PDSGAAYIHR 247
P +Y+HR
Sbjct: 320 PLEKESYVHR 329
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 273 (101.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 73/250 (29%), Positives = 117/250 (46%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
LA Q + + + + + + K R K I++ TP
Sbjct: 84 LAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLS 143
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
R++YLV+DEAD++ +G + ++ ++ + LFSATLP+ VE L+R+ M+
Sbjct: 144 LERLKYLVIDEADEMLNMG-FIDQVEAIIDELPTKRMTM-LFSATLPEDVERLSRTYMNA 201
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAKELY 177
+ + ++ I+ L F EE KL +L + NP +IF +++E +Y
Sbjct: 202 PTHIEIKAAGITTDKIEHTL-FEVREEEKL-SLLKDVTTIENPDSCIIFCRTQENVDHVY 259
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L IH + Q R +DDFR GK L+ATDV ARG+D + VINYD
Sbjct: 260 RQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDI 319
Query: 238 PDSGAAYIHR 247
P +Y+HR
Sbjct: 320 PLEKESYVHR 329
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 278 (102.9 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 68/213 (31%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S +E L+LDEAD++ + + + +++ CS+
Sbjct: 310 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 368
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 155
LFSAT+ D V++LA + + VR+ V + ++Q+ V + EG A+ +
Sbjct: 369 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 427
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR A+ F+ + +L+
Sbjct: 428 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILV 487
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 488 ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 520
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 275 (101.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 74/255 (29%), Positives = 131/255 (51%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXX 57
LA Q + K+L G + + L+ L L + ++I+TP
Sbjct: 284 LAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 343
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
++ +V+DEAD + ++G + +D +++ N S L SAT+P +E+LA ++H
Sbjct: 344 ELCGIKIVVVDEADTMLKMGFQQQVLD-ILEHVPNDSQT-ILVSATIPTSIEQLASQLLH 401
Query: 118 DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ VR+I G KN S++Q +++ +++ KL + + PPVL+FV K A +
Sbjct: 402 NPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILND-KKLFKPPVLVFVDCKLGA-D 459
Query: 176 LYGELA--FDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L E G+++ IHS+ SQT+R+N + G V+++T V+ RG+D V V+
Sbjct: 460 LLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVV 519
Query: 234 NYDFPDSGAAYIHRI 248
N+D P S Y+H++
Sbjct: 520 NFDMPSSMDEYVHQV 534
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 68/213 (31%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S +E L+LDEAD++ + + + +++ CS+
Sbjct: 331 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 389
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 155
LFSAT+ D V++LA + + VR+ V + ++Q+ V + EG A+ +
Sbjct: 390 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFVRIRPNREGDREAIVAALL 448
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR A+ F+ + +L+
Sbjct: 449 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILV 508
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 509 ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 541
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 277 (102.6 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 71/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 417 CNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 475
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 476 RQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEI 535
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+S + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 536 LRSIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 592
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 593 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 629
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 154 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 272 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 332 LARGIDVQQVSLVINYDLPTNRENYIHRI 360
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 275 (101.9 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 74/255 (29%), Positives = 131/255 (51%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXX 57
LA Q + K+L G + + L+ L L + ++I+TP
Sbjct: 284 LAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 343
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
++ +V+DEAD + ++G + +D +++ N S L SAT+P +E+LA ++H
Sbjct: 344 ELCGIKIVVVDEADTMLKMGFQQQVLD-ILEHVPNDSQT-ILVSATIPTSIEQLASQLLH 401
Query: 118 DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ VR+I G KN S++Q +++ +++ KL + + PPVL+FV K A +
Sbjct: 402 NPVRIITGEKNLPCSSVRQIILWVEEPAKKKKLFEILND-KKLFKPPVLVFVDCKLGA-D 459
Query: 176 LYGELA--FDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L E G+++ IHS+ SQT+R+N + G V+++T V+ RG+D V V+
Sbjct: 460 LLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVV 519
Query: 234 NYDFPDSGAAYIHRI 248
N+D P S Y+H++
Sbjct: 520 NFDMPSSMDEYVHQV 534
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 277 (102.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 67/213 (31%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S +E L+LDEAD++ + + + +++ CS+
Sbjct: 341 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 399
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 155
LFSAT+ D V++LA + + VR+ V + ++Q+ + + EG A+ +
Sbjct: 400 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 458
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR A+ F+ + +L+
Sbjct: 459 TRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILV 518
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 519 ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 551
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 273 (101.2 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 67/211 (31%), Positives = 115/211 (54%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP +++E LVLDEAD++ ++G ++ I ++ P+ ++
Sbjct: 125 DVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMG-FIRDIKKILALL--PAKRQN 181
Query: 99 L-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
L FSAT D + ELA+ +++ V + V +N A+ ++KQ + + L ++ E
Sbjct: 182 LMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQLIKQE 241
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ VL+F ++K A L L I A IH + SQ R A+ DF++G+ VL+AT
Sbjct: 242 NWQQ-VLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
D+ ARG+D + V+N+D P+ Y+HRI
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRI 331
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 278 (102.9 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 75/251 (29%), Positives = 118/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 338 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 397
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 398 LQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 455
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 456 PIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L + G++H D+ Q++R + +F+ +L+ATDV ARG+D + VINYD
Sbjct: 516 NNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDV 575
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 576 ARDIDTHTHRI 586
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 278 (102.9 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 75/251 (29%), Positives = 118/251 (47%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKK-ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ECK+ K N + + + + +I++ TP
Sbjct: 340 LCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATN 399
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
RV YLV DEAD++F++G ++ + + P LFSAT +E+LAR I+ D
Sbjct: 400 LQRVTYLVFDEADRMFDMG--FEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILID 457
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+RV+ G A+E + Q + S K L + E + + VL+FV K A+EL
Sbjct: 458 PIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 517
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L + G++H D+ Q++R + +F+ +L+ATDV ARG+D + VINYD
Sbjct: 518 NNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDV 577
Query: 238 PDSGAAYIHRI 248
+ HRI
Sbjct: 578 ARDIDTHTHRI 588
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 269 (99.8 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 68/210 (32%), Positives = 109/210 (51%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DIL++TP +V+ LVLDEAD++ +G + + ++ A +
Sbjct: 139 DILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLG-FTEELTALL-ALTPKKKQTL 196
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT P+ V L + ++++ + + + +A S + VF ++ K L +
Sbjct: 197 LFSATFPEQVTTLTQELLNNPIEI---QLQSADASTLVQRVFTVNKGEKTAVLAHLIQQE 253
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIFV +K + L +LA GI A V H D Q++R +D F+AG VLIATD
Sbjct: 254 QWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATD 313
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+D + + VIN++ P S + Y+HRI
Sbjct: 314 IAARGLDIEKLPVVINFNLPRSPSDYMHRI 343
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 279 (103.3 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 67/189 (35%), Positives = 104/189 (55%)
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RV +LV+DEAD++F++G I +++ P LFSAT P VE LAR +++ V
Sbjct: 679 RVTFLVMDEADRMFDMG-FEPQITRIIQNI-RPERQTVLFSATFPRQVETLARKVLNKPV 736
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELYGE 179
+ VG ++ ++ I Q LV E + L L + E S +L+FVQS+E+ LY +
Sbjct: 737 EIQVGGRSVVNKDITQ-LVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRD 795
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
+ +H QT RE+ + DF+ +LIAT V ARG+D K + V+N+D P+
Sbjct: 796 MIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPN 855
Query: 240 SGAAYIHRI 248
Y+HR+
Sbjct: 856 HYEDYVHRV 864
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 276 (102.2 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 67/213 (31%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S +E L+LDEAD++ + + + +++ CS+
Sbjct: 307 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 365
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 156
LFSAT+ D V++LA + + VR+ V + ++Q+ + + EG A+ +
Sbjct: 366 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 424
Query: 157 -ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR A+ F+ + +L+
Sbjct: 425 MRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILV 484
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 485 ATDVAARGLDIEGVKTVINFTMPNTVKHYVHRV 517
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 276 (102.2 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 67/213 (31%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S +E L+LDEAD++ + + + +++ CS+
Sbjct: 310 DILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDE-YFEEQMKEIIRMCSHHRQTM 368
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 156
LFSAT+ D V++LA + + VR+ V + ++Q+ + + EG A+ +
Sbjct: 369 -LFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALL 427
Query: 157 -ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR A+ F+ + +L+
Sbjct: 428 MRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILV 487
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 488 ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRV 520
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 268 (99.4 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 65/209 (31%), Positives = 105/209 (50%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP ++ VLDEAD++ G + D K SN +V L
Sbjct: 171 IIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV--L 228
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ + M D +R++V ++ E I+Q + EE KL L +
Sbjct: 229 LSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 288
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF+ ++ + L ++ +H D+ Q +R+ + +FR+G + VLI TD+
Sbjct: 289 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 348
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 349 LARGIDVQQVSLVINYDLPTNRENYIHRI 377
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 277 (102.6 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 78/256 (30%), Positives = 125/256 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 456 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGR 515
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+VLDEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 516 VTNLRRVTYVVLDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRAMEALA 570
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKE 171
R I+ + V VG ++ ++Q ++ EE K L L + V+IFV +E
Sbjct: 571 RRILSKPIEVQVGGRSVVCSDVEQHVIVI-EEENKFLKLLELLGHYQEKGSVIIFVDKQE 629
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 630 HADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLML 689
Query: 232 VINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 690 VVNYSCPNHYEDYVHR 705
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 274 (101.5 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 69/217 (31%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +++YLVLDEAD++ ++G + ++ PS +
Sbjct: 417 CNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 475
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 476 RQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEI 535
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 536 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 592
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 593 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 629
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 274 (101.5 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 70/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 418 CNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 476
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 477 RQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEI 536
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 537 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 593
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 594 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 630
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 274 (101.5 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 70/217 (32%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 418 CNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 476
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 477 RQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEI 536
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 537 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 593
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 594 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 630
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 270 (100.1 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 70/214 (32%), Positives = 112/214 (52%)
Query: 40 ILISTPXXXXXXXXXXXXXXSR-VEYLVLDEADKLF--EVGNLLKHIDPVVKACSNPSIV 96
I+I+TP R +++LV+DEAD+L E G +L D ++K
Sbjct: 202 IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVL---DRILKIIPTQERT 258
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALRQS 154
LFSAT+ +++L R+ + + V+ V K +++ Q L+ G + L+ L
Sbjct: 259 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNE 318
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
F + ++IF ++K A+ L G A +H DL+Q QR ++D F+AGK +L
Sbjct: 319 F---IGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSIL 375
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D V+ V+NYD P +YIHR+
Sbjct: 376 VATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRV 409
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 276 (102.2 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 78/256 (30%), Positives = 125/256 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPXXXXXXXXXXXXX 58
LA Q T+ECKK +K ++ + S ++ K +I++ TP
Sbjct: 442 LALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGR 501
Query: 59 XS---RVEYLVLDEADKLFEVGNLLKHIDP-VVKACSN--PSIVRSLFSATLPDFVEELA 112
+ RV Y+V+DEAD++F++G +P V++ N P +FSAT P +E LA
Sbjct: 502 VTNLRRVTYVVIDEADRMFDMG-----FEPQVMRIVDNVRPDRQTVMFSATFPRTMEALA 556
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKE 171
R I+ V V VG ++ ++Q ++ EE K L L + V+IFV +E
Sbjct: 557 RRILSKPVEVQVGGRSVVCSDVEQHVIVI-EEEKKFLKLLEILGHYQEKGSVIIFVDKQE 615
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A L +L +H + Q R++ ++DF+ G +L+AT V ARG+D K +
Sbjct: 616 HADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLIL 675
Query: 232 VINYDFPDSGAAYIHR 247
V+NY P+ Y+HR
Sbjct: 676 VVNYSCPNHYEDYVHR 691
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 264 (98.0 bits), Expect = 8.9e-23, P = 8.9e-23
Identities = 66/209 (31%), Positives = 102/209 (48%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
+++ TP ++ VLDEAD++ G + I + + + V L
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRG-FTEQIYDIFQLLPQSTQV-VL 201
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SAT+P V E+ M D VR++V + E IKQ + EE KL L +
Sbjct: 202 LSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVT 261
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF ++ + L +L +H D+ Q QR+ + +FR+G + VLIATD+
Sbjct: 262 ITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDL 321
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+D + V+ VINYD P + YIHRI
Sbjct: 322 LARGIDVQQVSLVINYDLPANRENYIHRI 350
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 268 (99.4 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 77/255 (30%), Positives = 120/255 (47%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS------KFSCDILISTPXXXXXXXXX 54
LA Q +E +KLA+G IK++ L T + +++ TP
Sbjct: 90 LADQVAKELRKLARGIH-NIKILT--LCGGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIK 146
Query: 55 XXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELAR 113
+ LVLDEAD++ E+G +D +V P ++L FSAT PD ++ ++
Sbjct: 147 GTLQLDNLNLLVLDEADRMLEMG-FQAALDNIVGR--TPLDRQTLLFSATFPDQIKSISE 203
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
SIM D V V + S +I QK G+++ +L ALR + IF +K+
Sbjct: 204 SIMTDPVMVKIASSEDQS-TISQKFFKVGNDDDRLDALRLLLLGNQVESTAIFCNTKKET 262
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+++ L FDG +H DL Q R+ + F +L+ATDV ARG+D ++ VI
Sbjct: 263 QQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVI 322
Query: 234 NYDFPDSGAAYIHRI 248
NY ++HRI
Sbjct: 323 NYHIARDSEVHVHRI 337
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 268 (99.4 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 77/255 (30%), Positives = 120/255 (47%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS------KFSCDILISTPXXXXXXXXX 54
LA Q +E +KLA+G IK++ L T + +++ TP
Sbjct: 90 LADQVAKELRKLARGIH-NIKILT--LCGGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIK 146
Query: 55 XXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELAR 113
+ LVLDEAD++ E+G +D +V P ++L FSAT PD ++ ++
Sbjct: 147 GTLQLDNLNLLVLDEADRMLEMG-FQAALDNIVGR--TPLDRQTLLFSATFPDQIKSISE 203
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
SIM D V V + S +I QK G+++ +L ALR + IF +K+
Sbjct: 204 SIMTDPVMVKIASSEDQS-TISQKFFKVGNDDDRLDALRLLLLGNQVESTAIFCNTKKET 262
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+++ L FDG +H DL Q R+ + F +L+ATDV ARG+D ++ VI
Sbjct: 263 QQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVI 322
Query: 234 NYDFPDSGAAYIHRI 248
NY ++HRI
Sbjct: 323 NYHIARDSEVHVHRI 337
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 228 (85.3 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 54/150 (36%), Positives = 80/150 (53%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+F+AT+P VE LAR+ + V +G +E +Q +V+ E K L + +
Sbjct: 606 MFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQ-IVYMMGENDKRKKLMEILSRK 664
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
++PPV+IFV K+ A L L G + +H Q QRE A+ ++G +L+ATD
Sbjct: 665 IDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATD 724
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V RG+D K V+ VINYD + Y HRI
Sbjct: 725 VAGRGIDIKDVSLVINYDMAKTIEDYTHRI 754
Score = 72 (30.4 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 35 KFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
+ C+I+I+TP ++ Y+VLDEAD++ ++G
Sbjct: 519 RLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMG 561
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 267 (99.0 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 75/252 (29%), Positives = 120/252 (47%)
Query: 1 LATQTTRECKKLA-KGNKFQIKLMKKELVRSTDLSKFSCDILISTPXXXXXXXXXXXXXX 59
LA Q EC K KG K + ++ DI+I+TP
Sbjct: 139 LALQVEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINL 198
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
+ YLVLDEAD++ ++G + + ++ P + SAT PD V LA+S + +
Sbjct: 199 KSITYLVLDEADRMLDMGFEPQIMKILIDV--RPDRQTVMMSATWPDGVRRLAKSYLRNP 256
Query: 120 VRVIVGRKNTASESIKQKLVFAGSE--EGKLLALR-QSFAESLNPPVLIFVQSKERAKEL 176
+ V VG + A + K + + K + + QSF + V++FVQ A ++
Sbjct: 257 MIVYVGTLDLAVSGVVLKYLQFDKDIFTWKYMQVNAQSFCTDV---VVVFVQLHVVADDI 313
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L G+ +H D Q RE A+DDF+ GK +L+ATD+ +RG+D + V N+D
Sbjct: 314 ASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFD 373
Query: 237 FPDSGAAYIHRI 248
FP + Y+HR+
Sbjct: 374 FPRNIEEYVHRV 385
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 69/217 (31%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +++YLVLDEAD++ ++G + ++ PS +
Sbjct: 396 CNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 454
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 455 RQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEI 514
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 515 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKC 571
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 572 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 608
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 272 (100.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 69/217 (31%), Positives = 116/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +++YLVLDEAD++ ++G + ++ PS +
Sbjct: 416 CNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 474
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q ++ G S+ KL+ +
Sbjct: 475 RQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEI 534
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 535 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKC 591
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 592 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 628
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 266 (98.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 70/221 (31%), Positives = 117/221 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DLS ++++TP +++LVLDEAD+L E+G + ++
Sbjct: 145 DLSA-KPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMG-FWPDMQKLMAMM- 201
Query: 92 NPSIVRSL-FSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKL--VFAGSEEGK 147
P ++L FSATLP+ ++ LA ++ +D ++V +N I+++L V GS+
Sbjct: 202 -PKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQA 260
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
L+AL + + P VL+F+ +++ A + L GI A +H + QT R + DF+
Sbjct: 261 LIALLKQYQW---PQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFK 317
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
A + VL+ATD++ARG+ + VIN D P S Y+HRI
Sbjct: 318 ADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVHRI 358
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 266 (98.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 70/221 (31%), Positives = 117/221 (52%)
Query: 32 DLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DLS ++++TP +++LVLDEAD+L E+G + ++
Sbjct: 145 DLSA-KPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMG-FWPDMQKLMAMM- 201
Query: 92 NPSIVRSL-FSATLPDFVEELARSIM-HDAVRVIVGRKNTASESIKQKL--VFAGSEEGK 147
P ++L FSATLP+ ++ LA ++ +D ++V +N I+++L V GS+
Sbjct: 202 -PKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQA 260
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
L+AL + + P VL+F+ +++ A + L GI A +H + QT R + DF+
Sbjct: 261 LIALLKQYQW---PQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFK 317
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
A + VL+ATD++ARG+ + VIN D P S Y+HRI
Sbjct: 318 ADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVHRI 358
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 272 (100.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 67/213 (31%), Positives = 114/213 (53%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S VE L+LDEAD++ + + + +++ CS
Sbjct: 303 DILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDE-YFEEQMKEIIRLCSRHRQTM 361
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 156
LFSAT+ + V++LA + + R+ V + ++Q+ + + EG A+ +
Sbjct: 362 -LFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALL 420
Query: 157 ESLNPP-VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
P V++F Q+K++A ++ L G+R G +H +LSQ QR A+ F+ + +L+
Sbjct: 421 TRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILV 480
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 481 ATDVAARGLDIEGVKTVINFTMPNTTKHYVHRV 513
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 272 (100.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 67/213 (31%), Positives = 114/213 (53%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DILI+TP S VE L+LDEAD++ + + + +++ CS
Sbjct: 304 DILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDE-YFEEQMKEIIRLCSRHRQTM 362
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSFA 156
LFSAT+ + V++LA + + R+ V + ++Q+ + + EG A+ +
Sbjct: 363 -LFSATMTEEVKDLASVSLKNPTRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALL 421
Query: 157 ESLNPP-VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
P V++F Q+K++A ++ L G+R G +H +LSQ QR A+ F+ + +L+
Sbjct: 422 TRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILV 481
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 482 ATDVAARGLDIEGVKTVINFTMPNTTKHYVHRV 514
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 240 (89.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 62/163 (38%), Positives = 90/163 (55%)
Query: 88 KACSNPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
K C N I R +FSAT ++ LA+ + ++VG+ + +E IKQ LVF EE
Sbjct: 573 KYC-NDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV-EEE 630
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
K L AE+ N ++FV++K +A + L+ + A IH D SQ +RE A+
Sbjct: 631 NKCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKL 690
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+ G +L+ATDV ARG+D + VIN+D P + YIHRI
Sbjct: 691 FKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRI 733
Score = 60 (26.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 31 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
++L K DI+++TP +LVLDEAD++ ++G
Sbjct: 496 SNLDK-GADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 240 (89.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 62/163 (38%), Positives = 90/163 (55%)
Query: 88 KACSNPSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
K C N I R +FSAT ++ LA+ + ++VG+ + +E IKQ LVF EE
Sbjct: 573 KYC-NDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV-EEE 630
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
K L AE+ N ++FV++K +A + L+ + A IH D SQ +RE A+
Sbjct: 631 NKCNYLLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKL 690
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+ G +L+ATDV ARG+D + VIN+D P + YIHRI
Sbjct: 691 FKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRI 733
Score = 60 (26.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 31 TDLSKFSCDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVG 77
++L K DI+++TP +LVLDEAD++ ++G
Sbjct: 496 SNLDK-GADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMG 541
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 79/259 (30%), Positives = 127/259 (49%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXXX 58
LATQ E KK A ++ + ++ S + + C ++++TP
Sbjct: 390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVG 449
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
+ +LVLDEAD++ ++G I +V+ + P + +FSAT P ++ELA
Sbjct: 450 LENIRFLVLDEADRMLDMG-FEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDF 508
Query: 116 MHDAVRVIVGRKNTASESIKQKL--VFAGSEEGKLLALRQSFAE----SLNPPVLIFVQS 169
+ + + + VGR + SE+I Q + V+ + LL L S + + + LIFV++
Sbjct: 509 LSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVET 568
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
K+ A L L IH D +Q +RE A+ FR+G +L+AT V ARG+D V
Sbjct: 569 KKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHV 628
Query: 230 NCVINYDFPDSGAAYIHRI 248
VIN+D P Y+HRI
Sbjct: 629 KHVINFDLPSDVEEYVHRI 647
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 70/217 (32%), Positives = 117/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 401 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 459
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGS--EEGKLLAL 151
LFSAT P+ ++ LA + + + V VG+ A ++Q ++ G ++ KL+ +
Sbjct: 460 RQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEI 519
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + P ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 520 LRNIGDE-RP--MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 576
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN++ P + Y+HRI
Sbjct: 577 PVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRI 613
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 70/217 (32%), Positives = 117/217 (53%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +V+YLVLDEAD++ ++G + ++ PS +
Sbjct: 401 CNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 459
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGS--EEGKLLAL 151
LFSAT P+ ++ LA + + + V VG+ A ++Q ++ G ++ KL+ +
Sbjct: 460 RQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEI 519
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + P ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 520 LRNIGDE-RP--MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 576
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN++ P + Y+HRI
Sbjct: 577 PVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRI 613
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 272 (100.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 70/213 (32%), Positives = 113/213 (53%)
Query: 39 DILISTPXXXXXXXXXXXXXX-SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
D++I+TP +E LVLDEAD++ E G ++ ++ S
Sbjct: 421 DVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDG-FADELNEILTTIPK-SRQT 478
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVG-RKNTASESIKQKL-VFAGSEEGKLLALRQSF 155
LFSAT+ D V++L R ++ VR++V +KNTA +++ + + G E+ +L L
Sbjct: 479 MLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVTLVQEFVRLRPGREDKRLGYLLHLC 538
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E V++F + K+ A + G++A +H +SQ QR +V+ FR G L+
Sbjct: 539 KEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVESFRDGNVNFLL 598
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ +RG+D KGV VINY+ P S Y+HR+
Sbjct: 599 ATDLASRGLDIKGVETVINYEAPQSHEIYVHRV 631
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 271 (100.5 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 64/213 (30%), Positives = 117/213 (54%)
Query: 39 DILISTPXXXXXXXXXX-XXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
D+LI+TP S++E L+LDEAD++ + + + +++ C+
Sbjct: 324 DVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDE-YFEEQMKEIIRMCAYQRQTM 382
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLLALRQSF- 155
LFSAT+ + V++LA + VR+ V + ++Q+ V ++EG A+ +
Sbjct: 383 -LFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALL 441
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ V++F Q+K++A ++ L G++ G +H +LSQTQR ++ F+ + +L+
Sbjct: 442 TRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILV 501
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D +GV VIN+ P++ Y+HR+
Sbjct: 502 ATDVAARGLDIEGVKTVINFTMPNTVKHYVHRV 534
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 269 (99.8 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 72/255 (28%), Positives = 128/255 (50%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKKELVRSTDLSKFS--CDILISTPXXXXXXXXXXXX 57
LA Q R+ K+L G + + L+ L L + ++I+TP
Sbjct: 283 LAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSV 342
Query: 58 XXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
S ++ +V+DEAD + ++G + +D + + + L SAT+PD +E+L ++H
Sbjct: 343 SLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTI--LVSATIPDSIEQLTDQLLH 400
Query: 118 DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ VR+I G KN S++Q +++ +++ KL + + PPVL+FV K A +
Sbjct: 401 NPVRIITGDKNLPCASVRQIILWVEDPAKKKKLFEILND-QKLFKPPVLVFVDCKLGA-D 458
Query: 176 LYGELA--FDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L E G+ + IHS+ SQ +R + + G V+++T V+ RG+D V V+
Sbjct: 459 LLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLVNVKLVV 518
Query: 234 NYDFPDSGAAYIHRI 248
N+D P S Y+H++
Sbjct: 519 NFDMPSSMDEYVHQV 533
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 269 (99.8 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 70/212 (33%), Positives = 105/212 (49%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++ P S VE LVLDEAD++ ++G + V K + R
Sbjct: 131 DVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMG----FVHDVKKVLARLPAKRQ 186
Query: 99 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT + +LA ++H+ R+ V NT E I+Q+ VF K L
Sbjct: 187 NLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQR-VFRLPASHKRALLAHLIT 245
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K A L L G+ A IH + SQ R A+ DF+AG+ +L+A
Sbjct: 246 AGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILVA 305
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 306 TDIAARGLDIDQLPHVVNFELPNVDEDYVHRI 337
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 275 (101.9 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 78/254 (30%), Positives = 122/254 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXX-- 56
L+ Q E K K +I + + R + K +IL+ TP
Sbjct: 808 LSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCK 867
Query: 57 -XXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+RV ++VLDEAD+L ++G I +++ C ++ SAT P++++ +A+ +
Sbjct: 868 VTNLNRVSFVVLDEADRLLDLG-FESQIYNILRNCRKDKQT-AMISATFPNYIQNMAKKL 925
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
++ + +IVG K + +I Q V E K+ L + E + VLIFV + A
Sbjct: 926 LYKPIEIIVGEKGKTNNNIYQ-FVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEAD 984
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
LY EL V+H QT R+ ++ F+ + VLIAT V+ARG+D K + VIN
Sbjct: 985 LLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVIN 1044
Query: 235 YDFPDSGAAYIHRI 248
Y PD YIHRI
Sbjct: 1045 YQCPDHIEDYIHRI 1058
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 275 (101.9 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 78/254 (30%), Positives = 122/254 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK--KELVRSTDLSKFSCDILISTPXXXXXXXXXXX-- 56
L+ Q E K K +I + + R + K +IL+ TP
Sbjct: 808 LSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCK 867
Query: 57 -XXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+RV ++VLDEAD+L ++G I +++ C ++ SAT P++++ +A+ +
Sbjct: 868 VTNLNRVSFVVLDEADRLLDLG-FESQIYNILRNCRKDKQT-AMISATFPNYIQNMAKKL 925
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
++ + +IVG K + +I Q V E K+ L + E + VLIFV + A
Sbjct: 926 LYKPIEIIVGEKGKTNNNIYQ-FVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEAD 984
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
LY EL V+H QT R+ ++ F+ + VLIAT V+ARG+D K + VIN
Sbjct: 985 LLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVIN 1044
Query: 235 YDFPDSGAAYIHRI 248
Y PD YIHRI
Sbjct: 1045 YQCPDHIEDYIHRI 1058
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 262 (97.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 67/209 (32%), Positives = 101/209 (48%)
Query: 40 ILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++ TP ++ LVLDEAD++ G + I V + P+ L
Sbjct: 154 VVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKG-FKEQIYDVYRYLP-PATQVCL 211
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
SATLP + E+ M D +R++V R E IKQ V EE K L +
Sbjct: 212 ISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
+IF +K + L ++ +H D+ Q +RE+ + +FR+G + VLI+TDV
Sbjct: 272 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDV 331
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ARG+D V+ +INYD P++ YIHRI
Sbjct: 332 WARGLDVSQVSLIINYDLPNNRELYIHRI 360
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 270 (100.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 70/217 (32%), Positives = 115/217 (52%)
Query: 38 CDILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP +++YLVLDEAD++ ++G + ++ PS +
Sbjct: 414 CNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG-FGPEMKKLISCPGMPSKEQ 472
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLAL 151
+FSAT P+ ++ LA + + + V VG+ A ++Q + G S+ KLL +
Sbjct: 473 RQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEI 532
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ + ++FV++K++A + L + I IH D Q +RE A+ DFR GK
Sbjct: 533 LRNIGDERT---MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKC 589
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D + V VIN+D P + Y+HRI
Sbjct: 590 PVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 626
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 264 (98.0 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 75/252 (29%), Positives = 123/252 (48%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFSCDILISTPXXXXXXXXXXXXX 58
L Q ++ + L F I+ + + ++ + K D+++ TP
Sbjct: 86 LVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALKEGADVVVGTPGRLIDYLKQKVYS 145
Query: 59 XSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSIM 116
+E LV+DEAD++F++G + + +++ P R +FSATL V ELA M
Sbjct: 146 LKEIEMLVIDEADRMFDMG-FIADLRFILRRLP-PYDKRQNLMFSATLNQRVMELAYEFM 203
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +V V + +E ++Q L G +E L L E + +IFV +K A+ L
Sbjct: 204 NVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLGLLRKEGMER-TMIFVNTKREAEFL 262
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L + VI D+ Q +R ++DF++GK ++IATDV +RG+ GV+ VINYD
Sbjct: 263 DERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATDVASRGLHIDGVSHVINYD 322
Query: 237 FPDSGAAYIHRI 248
P Y+HRI
Sbjct: 323 LPQDAEDYVHRI 334
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 263 (97.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 67/210 (31%), Positives = 105/210 (50%)
Query: 39 DILISTPXXXXXXXXXXXXXXSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
D+L++TP ++V VLDEAD++ +G + ++ V+ A
Sbjct: 137 DVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLG-FTEELEQVLAALPRQKQTL- 194
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
LFSAT P+ V L ++H + + ++ +I+Q+++ E+ K L +
Sbjct: 195 LFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQRVITVNREQ-KTALLAHLIKQH 251
Query: 159 LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATD 218
LIFV +K L +L+ GI A V H D +Q R +D F+ G+ VLIATD
Sbjct: 252 QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATD 311
Query: 219 VIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ARG+D + VIN+D P S A Y+HRI
Sbjct: 312 IAARGIDIDKLPVVINFDLPRSPADYMHRI 341
WARNING: HSPs involving 556 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 234 0.00087 113 3 11 22 0.39 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 806
No. of states in DFA: 601 (64 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.53u 0.08s 19.61t Elapsed: 00:00:01
Total cpu time: 19.56u 0.08s 19.64t Elapsed: 00:00:01
Start: Sat May 11 16:07:34 2013 End: Sat May 11 16:07:35 2013
WARNINGS ISSUED: 2