BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042003
(248 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449440077|ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
sativus]
Length = 616
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/248 (86%), Positives = 232/248 (93%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA+QT RECKKLAKG KF IKL+ KE++R D SKFSCD+LISTPLRLRLAIR+KKIDLS
Sbjct: 219 LASQTIRECKKLAKGKKFHIKLVTKEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLS 278
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G L+K ID VVKACSNPSIVRSLFSATLPDFVE+LARS+MHDAV
Sbjct: 279 RVEYLVLDESDKLFELG-LIKQIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAV 337
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKNTASE++KQKLVFAGSEEGKLLALRQSF+ESLNPPVLIFVQSKERAKELYGEL
Sbjct: 338 RVIVGRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKELYGEL 397
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AF+ IR VIHSDLSQ +REN VDDFRAGKTWVLIATDVI+RGMDFKGVNCVINYDFPDS
Sbjct: 398 AFENIRVSVIHSDLSQLERENVVDDFRAGKTWVLIATDVISRGMDFKGVNCVINYDFPDS 457
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 458 AAAYIHRI 465
>gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/248 (85%), Positives = 229/248 (92%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKLAKG KF IKL+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLS
Sbjct: 208 LAAQTARESKKLAKGKKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLS 267
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G L+K ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAV
Sbjct: 268 RVEYLVLDESDKLFELG-LVKQIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAV 326
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKN+ASE IKQKLVFAGSEEGKLLALRQSFAESLNPP+L+FVQSKERAKELY EL
Sbjct: 327 RVIIGRKNSASELIKQKLVFAGSEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTEL 386
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH+DLSQ+QRENAVDDFRAGKTWVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 387 AFDDIRVDVIHADLSQSQRENAVDDFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDS 446
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 447 PAAYIHRI 454
>gi|225439904|ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
Length = 524
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/248 (85%), Positives = 229/248 (92%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKLAKG KF IKL+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLS
Sbjct: 209 LAAQTARESKKLAKGKKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLS 268
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G L+K ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAV
Sbjct: 269 RVEYLVLDESDKLFELG-LVKQIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAV 327
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKN+ASE IKQKLVFAGSEEGKLLALRQSFAESLNPP+L+FVQSKERAKELY EL
Sbjct: 328 RVIIGRKNSASELIKQKLVFAGSEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTEL 387
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH+DLSQ+QRENAVDDFRAGKTWVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 388 AFDDIRVDVIHADLSQSQRENAVDDFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDS 447
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 448 PAAYIHRI 455
>gi|147784525|emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
Length = 554
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/248 (85%), Positives = 229/248 (92%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKLAKG KF IKL+ KEL+RS D+SK CDILISTPLRLR AIR+KK+DLS
Sbjct: 205 LAAQTARESKKLAKGKKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLS 264
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G L+K ID VVKACSNPSI+RSLFSATLPDFVEELAR+IMHDAV
Sbjct: 265 RVEYLVLDESDKLFELG-LVKQIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAV 323
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKN+ASE IKQKLVFAG+EEGKLLALRQSFAESLNPP+L+FVQSKERAKELY EL
Sbjct: 324 RVIIGRKNSASELIKQKLVFAGNEEGKLLALRQSFAESLNPPILLFVQSKERAKELYTEL 383
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH+DLSQ+QRENAVDDFRAGKTWVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 384 AFDDIRVDVIHADLSQSQRENAVDDFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDS 443
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 444 PAAYIHRI 451
>gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 535
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/248 (83%), Positives = 228/248 (91%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA+QTTRECKK+AKGNKF+IKLM KELVR+ DLS+ CDIL+STPLRL+LAIR+KK+DLS
Sbjct: 220 LASQTTRECKKMAKGNKFRIKLMTKELVRTKDLSRLPCDILVSTPLRLQLAIRKKKVDLS 279
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G LLK ID V KACSNPS++RSLFSATLP+ VEELAR+IMHDAV
Sbjct: 280 RVEYLVLDESDKLFELG-LLKQIDSVFKACSNPSVIRSLFSATLPESVEELARTIMHDAV 338
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN ASE+IKQKLVF GSEEGKL+ALRQSFAESLNPPVLIFVQ+KERA ELY EL
Sbjct: 339 RVIVGRKNAASETIKQKLVFTGSEEGKLIALRQSFAESLNPPVLIFVQNKERANELYEEL 398
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
FD IR GVIHSDL QTQRE AVDDFRAG +WVLIATDV+ARGMDFKGVNCVINYDFP+S
Sbjct: 399 KFDSIRVGVIHSDLLQTQREIAVDDFRAGNSWVLIATDVVARGMDFKGVNCVINYDFPNS 458
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 459 AAAYIHRI 466
>gi|356572415|ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 536
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/248 (82%), Positives = 223/248 (89%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
L+ QT RECKKLAK KF+IKLM K L+R+ D SKF CD+LISTPLRLRLAI+RKKIDLS
Sbjct: 224 LSVQTYRECKKLAKRKKFRIKLMTKNLLRNADFSKFPCDVLISTPLRLRLAIKRKKIDLS 283
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE L K ID V+KACSNPSI+RSLFSATLPDFVE+ AR +MHDAV
Sbjct: 284 RVEYLVLDESDKLFE-PELFKQIDSVIKACSNPSIIRSLFSATLPDFVEDQARELMHDAV 342
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN ASE+IKQKLVF GSEEGKLLA+RQSFAESLNPPVL+F+QSKERAKELY EL
Sbjct: 343 RVIVGRKNMASETIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYSEL 402
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIHSDLSQ +RENAVD+FRAGKTWVLIATDV+ARGMDFKGVNCVINYDFPDS
Sbjct: 403 AFDNIRVDVIHSDLSQAERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDS 462
Query: 241 GAAYIHRI 248
AAY+HRI
Sbjct: 463 AAAYVHRI 470
>gi|357510607|ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355500607|gb|AES81810.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/248 (81%), Positives = 225/248 (90%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
L+ QT RECKKLAKG KF+IKLM K L+R+ D SKFSCDILISTPLRL LAI++KK+DLS
Sbjct: 214 LSGQTYRECKKLAKGEKFRIKLMTKNLLRNADFSKFSCDILISTPLRLCLAIKKKKVDLS 273
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE L K ID ++KAC+NPSI+RSLFSATLPDFVE+ AR +MHDAV
Sbjct: 274 RVEYLVLDESDKLFE-PQLFKQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAV 332
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN AS++IKQKLVF GSEEGKLLA+RQSFAESLNPPVL+F+QSKERAKELYGEL
Sbjct: 333 RVIVGRKNMASDTIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGEL 392
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIHSDLSQ +RENAVD+FRAGKTWVLIATDV+ARGMDFKG+NCVINYDFPDS
Sbjct: 393 AFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDS 452
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 453 ASAYIHRI 460
>gi|356505198|ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 537
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/248 (81%), Positives = 222/248 (89%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
L+ QT RECKKLAK KF+IKLM K L+R+ D SKF CD+LISTPLRLRLAI+RKKIDLS
Sbjct: 225 LSVQTYRECKKLAKRKKFRIKLMTKNLLRNADFSKFPCDVLISTPLRLRLAIKRKKIDLS 284
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE L K ID V+KACSNPSI+RSLFSATLPDFVE+ AR +MHDAV
Sbjct: 285 RVEYLVLDESDKLFE-PELFKQIDSVIKACSNPSIIRSLFSATLPDFVEDRARELMHDAV 343
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN ASE+IKQKLVF GSEEGKLLA+RQSFAESLNPPVL+F+QSKERAKEL EL
Sbjct: 344 RVIVGRKNMASETIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELCSEL 403
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIHSDLSQ +RENAVD+FRAGKTWVLIATDV+ARGMDFKGVNCVINYDFPDS
Sbjct: 404 AFDSIRVDVIHSDLSQAERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDS 463
Query: 241 GAAYIHRI 248
AAY+HRI
Sbjct: 464 AAAYVHRI 471
>gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
gi|75328099|sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|29028778|gb|AAO64768.1| At3g09720 [Arabidopsis thaliana]
gi|110742885|dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332641282|gb|AEE74803.1| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
Length = 541
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/248 (80%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKL KG+ F I+LM K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS
Sbjct: 222 LAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLS 281
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VEYLVLDE+DKLFE +LLK ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAV
Sbjct: 282 KVEYLVLDESDKLFE-QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAV 340
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKNTASE++KQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 341 RVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDEL 400
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ IRAGVIHSDL +RENAVD FRAG+ WVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 401 KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDS 460
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 461 ASAYIHRI 468
>gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arabidopsis thaliana]
Length = 545
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/248 (80%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKL KG+ F I+LM K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS
Sbjct: 226 LAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLS 285
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VEYLVLDE+DKLFE +LLK ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAV
Sbjct: 286 KVEYLVLDESDKLFE-QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAV 344
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKNTASE++KQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 345 RVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDEL 404
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ IRAGVIHSDL +RENAVD FRAG+ WVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 405 KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDS 464
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 465 ASAYIHRI 472
>gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
gi|297330590|gb|EFH61009.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/248 (79%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKL KG+ F I+LM K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS
Sbjct: 220 LAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLRCDVLISTPMRLKRAIKAKKIDLS 279
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VEYLVLDE+DKLFE +LLK ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAV
Sbjct: 280 KVEYLVLDESDKLFE-QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAV 338
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKNTASE++KQKLVFAG+EEGKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 339 RVIIGRKNTASETVKQKLVFAGTEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDEL 398
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ IRAGVIHSDL +RENAVD FRAG+ WVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 399 KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDS 458
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 459 ASAYIHRI 466
>gi|224127806|ref|XP_002329182.1| predicted protein [Populus trichocarpa]
gi|222870963|gb|EEF08094.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/250 (78%), Positives = 221/250 (88%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI--D 58
LA QTTRECKK+AKG+KF+IKLM KEL+R+TD +K CDILISTP RL+L I +KK D
Sbjct: 214 LAAQTTRECKKMAKGSKFRIKLMTKELLRNTDFTKLPCDILISTPRRLQLCICKKKKKID 273
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LSRVEYLVLDE+DKLFE +LL+ D VVKACSNPSI+RSLFSATLP FVE++AR++MHD
Sbjct: 274 LSRVEYLVLDESDKLFE-RSLLEQTDSVVKACSNPSIIRSLFSATLPGFVEDVARTVMHD 332
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
AVR+IVG KN ASESIKQKL+FAGSEEGKLLALRQSFAESLNPP+LIFVQS ERA+ELYG
Sbjct: 333 AVRIIVGDKNAASESIKQKLIFAGSEEGKLLALRQSFAESLNPPMLIFVQSIERAEELYG 392
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FD IR GVIHS+LSQ QRE+ +DDFRAGKTWVLIATDV+ RGMDFKGV CVINYDFP
Sbjct: 393 ELKFDSIRVGVIHSNLSQEQRESVIDDFRAGKTWVLIATDVLGRGMDFKGVKCVINYDFP 452
Query: 239 DSGAAYIHRI 248
D A+YIHRI
Sbjct: 453 DCAASYIHRI 462
>gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|125601315|gb|EAZ40891.1| hypothetical protein OsJ_25369 [Oryza sativa Japonica Group]
Length = 540
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/248 (77%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QTTRECKKLAKG KF IKLM K+L +S + CDILISTPLRL A++++ +DLS
Sbjct: 227 LAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLS 286
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G ++ ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAV
Sbjct: 287 RVEYLVLDESDKLFELG-FVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAV 345
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E+GKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 346 RVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKEL 405
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD +RA VIH+DL + QR++AVD+ RAGKTWVLIAT+VIARGMDFKGVNCVINYDFP+S
Sbjct: 406 AFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPES 465
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 466 ASAYIHRI 473
>gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group]
Length = 540
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/248 (76%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QTTRECKKLAKG KF IKLM K+L +S + CDIL+STPLRL A++++ +DLS
Sbjct: 227 LAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILVSTPLRLDHAVQKRDLDLS 286
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G ++ ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAV
Sbjct: 287 RVEYLVLDESDKLFELG-FVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAV 345
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E+GKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 346 RVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKEL 405
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD +RA VIH+DL + QR++AVD+ RAG+TWVLIAT+VIARGMDFKGVNCVINYDFP+S
Sbjct: 406 AFDDVRADVIHADLDEEQRQDAVDNLRAGQTWVLIATEVIARGMDFKGVNCVINYDFPES 465
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 466 ASAYIHRI 473
>gi|357121693|ref|XP_003562552.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like
[Brachypodium distachyon]
Length = 539
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/248 (72%), Positives = 216/248 (87%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QTTRECKKLAKG KF +KLM K+L + + CDI++STPLRL A++++ +DLS
Sbjct: 226 LAAQTTRECKKLAKGRKFSVKLMTKDLSQDGNFKDMHCDIVVSTPLRLDHAVKKRDLDLS 285
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G ++ ID +VKACS+PSI+RSLFSATLP+ +E LAR+IMHDAV
Sbjct: 286 RVEYLVLDESDKLFELG-FVEVIDSIVKACSSPSIIRSLFSATLPETIEALARTIMHDAV 344
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E GKL+ALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 345 RVIVGRKNSASSLIKQKLIFAGTERGKLMALRQSFAESLNPPVLIFVQSKERAKELYKEL 404
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH DL++ QR++AVD+ RAGK+WVLIAT+V+ARGMDFKGVNCVINYDFP+S
Sbjct: 405 AFDDIRVDVIHGDLTEEQRQDAVDNLRAGKSWVLIATEVLARGMDFKGVNCVINYDFPES 464
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 465 ASAYIHRI 472
>gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
gi|241924516|gb|EER97660.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
Length = 546
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 213/248 (85%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RECKKL KG K+ IKLM KEL +S + CDIL+STPLRL A++++ +DLS
Sbjct: 233 LAAQTVRECKKLIKGRKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLS 292
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
VEYLVLDE+DKLFE+G ++ +D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+
Sbjct: 293 SVEYLVLDESDKLFELG-FVEVVDSVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAI 351
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E GKLLALRQSF ESLNPPVLIFVQSKERAKELY EL
Sbjct: 352 RVIVGRKNSASSLIKQKLIFAGTERGKLLALRQSFQESLNPPVLIFVQSKERAKELYKEL 411
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD +R IH+DL++ QR++AVD+ RAGKTWVLIAT+VIARGMDFKGVNCVINYDFP+S
Sbjct: 412 AFDDVRVDAIHADLNEQQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPES 471
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 472 AAAYIHRI 479
>gi|293333116|ref|NP_001169206.1| uncharacterized protein LOC100383059 [Zea mays]
gi|223975507|gb|ACN31941.1| unknown [Zea mays]
Length = 364
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/248 (72%), Positives = 211/248 (85%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RECKKL KG K+ IKLM KEL +S + CDIL+STPLRL A++++ +DLS
Sbjct: 51 LAAQTVRECKKLVKGRKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLS 110
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
VEYLVLDE+DKLFE+G ++ +D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+
Sbjct: 111 SVEYLVLDESDKLFELG-FVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAI 169
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E GKLL LRQ+F ESLNPPVLIFVQSKERAKELY EL
Sbjct: 170 RVIVGRKNSASSLIKQKLIFAGTERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKEL 229
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH+DLS+ QR++AVD+ RAGKTWVLIAT+VIARGMDFKGV VINYDFP+S
Sbjct: 230 AFDDIRVDVIHADLSEQQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVASVINYDFPES 289
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 290 AAAYIHRI 297
>gi|414887918|tpg|DAA63932.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 541
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/248 (72%), Positives = 211/248 (85%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RECKKL KG K+ IKLM KEL +S + CDIL+STPLRL A++++ +DLS
Sbjct: 228 LAAQTVRECKKLVKGRKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLS 287
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
VEYLVLDE+DKLFE+G ++ +D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+
Sbjct: 288 SVEYLVLDESDKLFELG-FVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAI 346
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E GKLL LRQ+F ESLNPPVLIFVQSKERAKELY EL
Sbjct: 347 RVIVGRKNSASSLIKQKLIFAGTERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKEL 406
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD IR VIH+DLS+ QR++AVD+ RAGKTWVLIAT+VIARGMDFKGV VINYDFP+S
Sbjct: 407 AFDDIRVDVIHADLSEQQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVASVINYDFPES 466
Query: 241 GAAYIHRI 248
AAYIHRI
Sbjct: 467 AAAYIHRI 474
>gi|414887919|tpg|DAA63933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 292
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/226 (73%), Positives = 194/226 (85%), Gaps = 1/226 (0%)
Query: 23 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKH 82
M KEL +S + CDIL+STPLRL A++++ +DLS VEYLVLDE+DKLFE+G ++
Sbjct: 1 MTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELG-FVEV 59
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 142
+D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+RVIVGRKN+AS IKQKL+FAG
Sbjct: 60 VDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVGRKNSASSLIKQKLIFAG 119
Query: 143 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENA 202
+E GKLL LRQ+F ESLNPPVLIFVQSKERAKELY ELAFD IR VIH+DLS+ QR++A
Sbjct: 120 TERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKELAFDDIRVDVIHADLSEQQRQDA 179
Query: 203 VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VD+ RAGKTWVLIAT+VIARGMDFKGV VINYDFP+S AAYIHRI
Sbjct: 180 VDNLRAGKTWVLIATEVIARGMDFKGVASVINYDFPESAAAYIHRI 225
>gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690413|gb|EDQ76780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/248 (64%), Positives = 200/248 (80%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QTTRE KKL G KF++++M K L D S CDIL+STPLRL ++ KIDLS
Sbjct: 105 LALQTTRELKKLTVGTKFRVRVMTKALALCNDFSNLPCDILVSTPLRLDALLKGSKIDLS 164
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VE+LVLDE+DKLFE+G ++ ID VV AC+NP IVR+LFSATLPD VEELARSIMHDA+
Sbjct: 165 KVEFLVLDESDKLFEMG-FVEQIDSVVAACTNPKIVRTLFSATLPDTVEELARSIMHDAI 223
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
R+ +G +N+AS++++Q+LVF GSEEGK+LALRQ F ESL PPVLIFV+SKERA EL+ +L
Sbjct: 224 RITIGERNSASQTVRQRLVFVGSEEGKILALRQIFNESLRPPVLIFVKSKERAAELHKQL 283
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD + IH+D +Q QR+ AV+ FR GKTWVLIATD++ RGMDFKG+NCVINYDFP S
Sbjct: 284 AFDNLSIDSIHADRTQAQRDAAVERFREGKTWVLIATDLMGRGMDFKGLNCVINYDFPPS 343
Query: 241 GAAYIHRI 248
++YIHR+
Sbjct: 344 ISSYIHRV 351
>gi|449516225|ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like, partial
[Cucumis sativus]
Length = 441
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/198 (84%), Positives = 184/198 (92%), Gaps = 1/198 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA+QT RECKKLAKG KF IKL+ KE++R D SKFSCD+LISTPLRLRLAIR+KKIDLS
Sbjct: 245 LASQTIRECKKLAKGKKFHIKLVTKEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLS 304
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G L+K ID VVKACSNPSIVRSLFSATLPDFVE+LARS+MHDAV
Sbjct: 305 RVEYLVLDESDKLFELG-LIKQIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAV 363
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKNTASE++KQKLVFAGSEEGKLLALRQSF+ESLNPPVLIFVQSKERAKELYGEL
Sbjct: 364 RVIVGRKNTASETVKQKLVFAGSEEGKLLALRQSFSESLNPPVLIFVQSKERAKELYGEL 423
Query: 181 AFDGIRAGVIHSDLSQTQ 198
AF+ IR VIHSDLSQ +
Sbjct: 424 AFENIRVSVIHSDLSQLE 441
>gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
gi|300145491|gb|EFJ12167.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
Length = 415
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/248 (58%), Positives = 195/248 (78%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q EC++LA G+K + +L+ K L ++ D + CDIL+STPLRL ++ +KIDL
Sbjct: 104 LAAQLITECRRLANGSKIRARLLTKRLFKNPDFASLRCDILVSTPLRLDKLVKSEKIDLK 163
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEY +LDE+DKLFE+G ++ ID +V AC+ +IVR+LFSATLP+ VEELAR+IMHDA+
Sbjct: 164 RVEYFILDESDKLFELG-FMQQIDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAI 222
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
R+++G +N+ASE+++QKL++AG+EEGKLLAL+Q F E L+PP+++FVQ KERAK+L+ L
Sbjct: 223 RIVIGDRNSASETVQQKLMYAGNEEGKLLALKQFFKEGLSPPIILFVQCKERAKQLHKAL 282
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ +R IH+D +QTQRE AV +FR GKTW+LIATD++ARGMDFKGVN VINYD P
Sbjct: 283 LSEKLRVDSIHADRTQTQREIAVLNFRTGKTWILIATDLMARGMDFKGVNWVINYDVPQD 342
Query: 241 GAAYIHRI 248
YIHRI
Sbjct: 343 TTVYIHRI 350
>gi|384487383|gb|EIE79563.1| hypothetical protein RO3G_04268 [Rhizopus delemar RA 99-880]
Length = 546
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 137/251 (54%), Positives = 178/251 (70%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV---RSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q RE LA+ K +I ++ K T S+ DIL++TPLRL AI+ K++
Sbjct: 222 LAQQIAREATILAQDTKLRINVLSKATAADKSQTPESRQKFDILVTTPLRLVYAIKEKEV 281
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS V +LVLDEADKL + G L D + ACS+ +I +SLFSAT VEELA+S+M
Sbjct: 282 DLSAVRHLVLDEADKLLDQG-FLDQTDEIFAACSSTTIQKSLFSATFSSHVEELAKSVMK 340
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
D +R+++G KN A+++IKQ+L+F G+E GK +ALRQ + L PPVLIFVQS +RAKEL+
Sbjct: 341 DPIRIVIGAKNAATDTIKQELLFTGTEAGKRIALRQLIQKGLKPPVLIFVQSIDRAKELF 400
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL FDGI VIHSD ++ QR+ +D FR GK WVLIATD++ARG+DFKGVN VINYDF
Sbjct: 401 HELVFDGINVEVIHSDRTKAQRDKIIDSFRVGKIWVLIATDLMARGLDFKGVNLVINYDF 460
Query: 238 PDSGAAYIHRI 248
P + A+YIHRI
Sbjct: 461 PQTVASYIHRI 471
>gi|281209492|gb|EFA83660.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 880
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 184/250 (73%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q R+ + +KG F+I ++ K L +S FS DILI+TPLRL I+ + ++
Sbjct: 466 LAQQIYRQFRLFSKGKPFRICVLTKGLSQSNKAEPFSKTFDILITTPLRLVHLIKEENVN 525
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L++VE+LV DEADKLF+ ++ +D VV AC N + SLFSAT+ + VE++ARSIM++
Sbjct: 526 LNKVEHLVFDEADKLFD-QQFVEQVDDVVNACKNKKLKISLFSATMNNLVEDMARSIMNN 584
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+++++G++N+AS ++ QKL+F G EEGKLLA+RQ F + L PPVLIFVQSKERA+EL+
Sbjct: 585 PIKIVIGQENSASTNVDQKLIFVGKEEGKLLAVRQLFQKGLEPPVLIFVQSKERAQELFQ 644
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FD I VIHSD +Q QR+ V+ FR GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 645 ELIFDNINVDVIHSDRTQFQRDKIVEKFRTGKIWVLICTELMARGMDFKGVNYVINFDFP 704
Query: 239 DSGAAYIHRI 248
+ A+Y+HRI
Sbjct: 705 KTVASYVHRI 714
>gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
gi|300162752|gb|EFJ29364.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
Length = 449
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/256 (53%), Positives = 179/256 (69%), Gaps = 35/256 (13%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q EC++LA G ISTPLRL ++ +KIDL
Sbjct: 156 LAAQLITECRRLANG--------------------------ISTPLRLDKLVKSEKIDLK 189
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEY +LDE+DKLFE+G ++ ID +V AC+ +IVR+LFSATLP+ VEELAR+IMHDA+
Sbjct: 190 RVEYFILDESDKLFELG-FMQQIDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAI 248
Query: 121 RVIVGRK--------NTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
R+++G + N+ASE+++QKL++AG+EEGKLLAL+Q F E L+PP+++FVQ KER
Sbjct: 249 RIVIGERGFNSKRCRNSASETVQQKLMYAGNEEGKLLALKQFFKEGLSPPIILFVQCKER 308
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ L + +R IH+D +QTQRE AV +FR GKTW+LIATD++ARGMDFKGVN V
Sbjct: 309 AKQLHKALLSEKLRVDSIHADRTQTQREIAVLNFRTGKTWILIATDLMARGMDFKGVNWV 368
Query: 233 INYDFPDSGAAYIHRI 248
INYD P YIHRI
Sbjct: 369 INYDVPQDTTVYIHRI 384
>gi|328773151|gb|EGF83188.1| hypothetical protein BATDEDRAFT_29188 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 182/259 (70%), Gaps = 14/259 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR-----STDLSKFSCDILISTPLRLRLAIRRK 55
LA QT RE KKL+ G F+ ++ K S+ L F DILISTPLRL AI+
Sbjct: 109 LAQQTYRELKKLSVGKPFKTCVLTKATNATNPDVSSTLKNF--DILISTPLRLVTAIKEN 166
Query: 56 KIDLSR------VEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVE 109
I L + V +LVLDEADKL E+G L+ +D + ACS+ ++ +SLFSAT+P +E
Sbjct: 167 AIQLDKQVYRILVRHLVLDEADKLLELG-FLEQVDEIFAACSSTTLQKSLFSATMPSGIE 225
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
+LAR+IM D +R+IVG K A+E+I QKL+F G EEGKL+A+RQ E L PPVLIFVQS
Sbjct: 226 QLARTIMKDPIRIIVGCKEGATETINQKLMFVGQEEGKLIAMRQLIQEGLRPPVLIFVQS 285
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+RAKEL+ EL +DGI V+HS+ +QTQR+ + +FR GK WVLIAT+++ARG+DFKGV
Sbjct: 286 IDRAKELFHELVYDGINVDVMHSERTQTQRDTIIKNFRCGKIWVLIATELMARGIDFKGV 345
Query: 230 NCVINYDFPDSGAAYIHRI 248
N VINYDFP + +Y+HRI
Sbjct: 346 NLVINYDFPQTVQSYVHRI 364
>gi|145344838|ref|XP_001416931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577157|gb|ABO95224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 474
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/248 (54%), Positives = 178/248 (71%), Gaps = 3/248 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q+ R + L++G + + D SK DI+++TP+RL++ ++ KIDLS
Sbjct: 106 LAGQSARILRILSRGVSGLKSCLLTKATAGNDFSKV--DIVVATPMRLKILLQHDKIDLS 163
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+V YLVLDEADKLFE+G ++ ID VV AC N + R+LFSATLP+ VEELARS+M +
Sbjct: 164 KVLYLVLDEADKLFEMG-FVEQIDAVVAACDNKDVTRALFSATLPEKVEELARSVMARPI 222
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
R+ VG +N+AS +I Q++VF G E GKLLALRQ E + PPV+IF QSKERAK L EL
Sbjct: 223 RLTVGERNSASNTISQRMVFCGHEAGKLLALRQIIREGIKPPVIIFTQSKERAKHLAKEL 282
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
DG+ G+IH+++S ++RE VD FR G+TWVLIATD++ARGMDF GV+ VIN+DFP S
Sbjct: 283 TGDGLHIGLIHAEMSDSKREEQVDRFRMGETWVLIATDLMARGMDFVGVSTVINFDFPGS 342
Query: 241 GAAYIHRI 248
+YIHRI
Sbjct: 343 PTSYIHRI 350
>gi|414591046|tpg|DAA41617.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 414
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/185 (71%), Positives = 155/185 (83%), Gaps = 1/185 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RECKKL KG K+ IKLM KEL +S + CDIL+STPLRL A++++ +DLS
Sbjct: 228 LAAQTVRECKKLVKGRKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLS 287
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
VEYLVLDE+DKLFE+G ++ +D VV+ACSNPSI+RSLFSATLPD +E LAR+IMHDA+
Sbjct: 288 SVEYLVLDESDKLFELG-FVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAI 346
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E GKLL LRQ+F ESLNPPVLIFVQSKERAKELY EL
Sbjct: 347 RVIVGRKNSASSLIKQKLIFAGTERGKLLTLRQNFQESLNPPVLIFVQSKERAKELYKEL 406
Query: 181 AFDGI 185
AFD I
Sbjct: 407 AFDDI 411
>gi|300120302|emb|CBK19856.2| unnamed protein product [Blastocystis hominis]
Length = 563
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/248 (52%), Positives = 170/248 (68%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q R +L + + + K++ K K S D LISTPLRL AI IDLS
Sbjct: 210 LAAQVHRHLLRLGERSGIKSKVLSKSTWPIFQEGKQSIDCLISTPLRLISAISASIIDLS 269
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+ E LVLDE DKLFE G ++ ID ++ ACSNP + R LFSATLP VE +AR+++ D +
Sbjct: 270 QAEILVLDEGDKLFEDG-FIEQIDEIMAACSNPRLQRLLFSATLPQGVEAIARTVLRDPI 328
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVG KNT + ++Q LV+ G+EEGKL+A+R E PP+L+FVQSK+RA++LY EL
Sbjct: 329 RVIVGHKNTTTSDVEQSLVYCGNEEGKLIAIRNLLREGFEPPMLVFVQSKDRARQLYTEL 388
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
A+D + VIHSDLS R A++ FR G+TWVLIATD++ RG+DF G+N V+NYDFP S
Sbjct: 389 AYDRVNVDVIHSDLSNLARTAAINRFRTGETWVLIATDLLGRGLDFLGLNTVVNYDFPQS 448
Query: 241 GAAYIHRI 248
G YIHRI
Sbjct: 449 GVDYIHRI 456
>gi|255075181|ref|XP_002501265.1| predicted protein [Micromonas sp. RCC299]
gi|226516529|gb|ACO62523.1| predicted protein [Micromonas sp. RCC299]
Length = 432
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 173/248 (69%), Gaps = 4/248 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q+ R K L +G ++ + ++ + +K DIL++TPLRL+ I + K+ L
Sbjct: 115 LAQQSFRILKLLCRGTN-TLRCVWSSATQNNEFAKV--DILVATPLRLKSLIEKNKVSLG 171
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
V YLVLDEADKLFE+G ++ +D V AC P+I R+LFSATLP+ VE LARS+M +
Sbjct: 172 AVRYLVLDEADKLFEMG-FVEQVDAAVAACDGPNITRALFSATLPETVENLARSVMTQPI 230
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
R+ VG +N+AS +I Q LVF G E GKLLALRQ + PP+++FVQSK+RAK+L EL
Sbjct: 231 RLTVGERNSASGAIAQSLVFCGQERGKLLALRQLIDRGIKPPIIVFVQSKDRAKQLAKEL 290
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ DG+ G+IH+ +S +R VD FRAG TWVL+ATD++ARGMDF GV+ VINYDFP S
Sbjct: 291 SGDGLHLGLIHAAMSDAKRRAQVDRFRAGDTWVLVATDLMARGMDFVGVSTVINYDFPGS 350
Query: 241 GAAYIHRI 248
+YIHRI
Sbjct: 351 PHSYIHRI 358
>gi|428174311|gb|EKX43208.1| hypothetical protein GUITHDRAFT_158075 [Guillardia theta CCMP2712]
Length = 464
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 172/251 (68%), Gaps = 6/251 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST-----DLSKFSCDILISTPLRLRLAIRRK 55
LATQ +CK L +K Q+KL+ K S D + D+++STP RL +++K
Sbjct: 118 LATQIFNQCKLLKAFSKLQVKLLTKATAASVAALQMDPQARNHDVVVSTPARLVSLLQQK 177
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+DLS VE L++DEADKLFE G + +D ++ ACSN + +SLFSAT+P +EELARSI
Sbjct: 178 SLDLSSVELLIVDEADKLFEEG-FITQLDEILAACSNRKLQKSLFSATIPPQIEELARSI 236
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
M V VG K A+ IKQKLVF GSEEGKL+A+RQ L PPVL+FVQS +RAK+
Sbjct: 237 MPHPTFVTVGSKVGANSKIKQKLVFVGSEEGKLIAIRQLIQTGLKPPVLMFVQSIDRAKQ 296
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +DGI V+H++ +Q QR+N + FR+G WVLI TD++ARG+DFKGVN VINY
Sbjct: 297 LFRELVYDGINVDVMHAERTQAQRDNIISQFRSGAIWVLICTDLMARGIDFKGVNLVINY 356
Query: 236 DFPDSGAAYIH 246
DFP S +YIH
Sbjct: 357 DFPQSTISYIH 367
>gi|448082648|ref|XP_004195179.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359376601|emb|CCE87183.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 555
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 179/254 (70%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-----RSTDLSKFSCDILISTPLRLRLAIRRK 55
LATQ E + L KG K ++ ++ K L ++ + SK+ DILISTPLRL ++++
Sbjct: 206 LATQIHDELQTLVKGKKLKVGVLSKSLASKINNKAVNASKY--DILISTPLRLIECVKKE 263
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+DLSRVE L++DEAD+LFE G ++ D ++ C+ P I +S+FSAT+P VEE+A+SI
Sbjct: 264 TVDLSRVEELIVDEADRLFEEG-FVEQTDDILFQCTYPKIRKSIFSATIPSGVEEMAQSI 322
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D VRVIVG K ASE I+QKLVF G+E+GKLLA+RQ E+ PPV+IF+QS RAK
Sbjct: 323 MRDPVRVIVGHKEAASELIQQKLVFTGNEQGKLLAIRQMITENEFVPPVIIFLQSITRAK 382
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ +Q QR++ + F+ G WVLI TDVI+RG+DFKGVN VIN
Sbjct: 383 ALFHELIYDKLNVDVIHAERTQKQRDDVIKRFKNGDIWVLITTDVISRGVDFKGVNMVIN 442
Query: 235 YDFPDSGAAYIHRI 248
YD P S +Y+HRI
Sbjct: 443 YDVPQSAQSYVHRI 456
>gi|340374721|ref|XP_003385886.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Amphimedon queenslandica]
Length = 593
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL---SKFSCDILISTPLRL--RLAIRRK 55
LA QT REC +L+ G+ F I ++ K + S DIL++TP RL L++
Sbjct: 250 LAQQTYRECVRLSSGSGFSIHVLTKATASANSFGPQSSLKFDILVTTPNRLVHMLSLDPP 309
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L VE+L+LDE DKLFE G ID + ACSNP+I R LFSATL VEE +R
Sbjct: 310 GIVLDNVEWLILDECDKLFEDGVTGFKDQIDEIFTACSNPNIKRGLFSATLASGVEEFSR 369
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + VRVI+G +N+A+E+IKQ+L++ G E GKLLA+R + PPVL+FVQS ERA
Sbjct: 370 AHFDNFVRVIIGLQNSATETIKQQLLYVGQETGKLLAMRDIIHKGFTPPVLVFVQSIERA 429
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL +DG+ VIHS+ +Q QR+N + FR GK W+LI TD++ RG+DFKGVN VI
Sbjct: 430 KELFHELIYDGMNVDVIHSERTQAQRDNVIKSFREGKIWILICTDLMGRGIDFKGVNLVI 489
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHR+
Sbjct: 490 NYDFPQSSVSYIHRV 504
>gi|66820759|ref|XP_643949.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
gi|74927179|sp|Q86IZ9.1|DDX52_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx52; AltName:
Full=DEAD box protein 52
gi|60472102|gb|EAL70055.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
Length = 668
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 171/250 (68%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q R + L+KG F+I ++ K L + + DILI+TPLRL I+ +
Sbjct: 280 LAQQIYRNFRLLSKGKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLS 339
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L++VEYLV DEADKLF+ N + +D VV AC NP + LFSAT+ VEEL SIM +
Sbjct: 340 LNKVEYLVFDEADKLFD-KNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKN 398
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+++I+G +N A+ ++ QKL++ G EEGKLLA+RQ + L PP+LIF QSKERA +L+
Sbjct: 399 PIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQ 458
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FDGI VIHS+ +Q QR+ V FR GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 459 ELIFDGINVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFP 518
Query: 239 DSGAAYIHRI 248
+ A+YIHRI
Sbjct: 519 HTLASYIHRI 528
>gi|448087199|ref|XP_004196272.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359377694|emb|CCE86077.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 179/254 (70%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-----RSTDLSKFSCDILISTPLRLRLAIRRK 55
LATQ E + L KG K ++ ++ K L ++ + SK+ DILISTPLRL ++++
Sbjct: 203 LATQIHDELQALVKGKKLKVGVLSKSLASKINNKAVNASKY--DILISTPLRLIECVKKE 260
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+DLSRVE L++DEAD+LFE G ++ D ++ C+ P I +S+FSAT+P VEE+A+SI
Sbjct: 261 TVDLSRVEELIVDEADRLFEEG-FVEQTDDILFQCTYPKIRKSIFSATIPSGVEEMAQSI 319
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D VRVIVG K ASE I+Q+LVF G+E+GKLLA+RQ E+ PPV+IF+QS RAK
Sbjct: 320 MRDPVRVIVGHKEAASELIQQRLVFTGNEQGKLLAIRQMITENEFVPPVIIFLQSITRAK 379
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ +Q QR++ + F+ G WVLI TDVI+RG+DFKGVN VIN
Sbjct: 380 ALFHELIYDKLNVDVIHAERTQKQRDDVIKRFKNGDIWVLITTDVISRGVDFKGVNLVIN 439
Query: 235 YDFPDSGAAYIHRI 248
YD P S +Y+HRI
Sbjct: 440 YDVPQSAQSYVHRI 453
>gi|328870357|gb|EGG18732.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 734
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 178/250 (71%), Gaps = 4/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV--RSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q R + +KG F+I ++ K + + +SK + DILI+TP R+ I+ + +
Sbjct: 329 LAQQIYRNFRLFSKGKPFKICVLSKTVSGDQMAPISK-NFDILITTPQRIVNLIQSRVVK 387
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ VE+LV DEADKLF+ L+ +D V+ AC N S+ LFSAT+ VEE+ARSIM +
Sbjct: 388 LNHVEHLVFDEADKLFD-DQFLEQVDSVINACKNASLKIHLFSATMNVVVEEMARSIMKN 446
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
++V++G +N+AS ++ QKL+F G E+GKLLALRQ F + L PP+LIFVQSKERA EL+
Sbjct: 447 PIKVLIGSQNSASINVDQKLLFVGKEDGKLLALRQLFQKGLEPPILIFVQSKERATELFQ 506
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FD I VIHSD +Q QR+ V FR+GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 507 ELIFDNINVDVIHSDRTQQQRDTIVQRFRSGKIWVLICTELMARGMDFKGVNYVINFDFP 566
Query: 239 DSGAAYIHRI 248
++ A+Y+HRI
Sbjct: 567 NTIASYVHRI 576
>gi|330790576|ref|XP_003283372.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
gi|325086637|gb|EGC40023.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
Length = 462
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 174/250 (69%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL-VRSTDLSKF-SCDILISTPLRLRLAIRRKKID 58
LA Q R + L+KG F+I ++ K L +STD S + DILI+TPLRL I+ +
Sbjct: 132 LAQQIYRNFRLLSKGKPFRICVLSKNLHNQSTDESLIKNYDILITTPLRLVYLIKENVLK 191
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ VEYLV DEADKLF+ + ++ ID VV AC N + LFSAT+ VEELA SIM +
Sbjct: 192 LNNVEYLVFDEADKLFD-RDFVEQIDDVVTACQNQKLKICLFSATMNTLVEELANSIMKN 250
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+++ +G +N A+ ++ QKL++ G EEGKL+A+RQ + L PP+LIF QSKERA +L+
Sbjct: 251 PIKITIGEENAAAVTVDQKLIYVGREEGKLMAVRQLIQKGLEPPILIFTQSKERAHDLFQ 310
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FDGI VIHS+ +Q QR+ V FR GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 311 ELVFDGINVDVIHSERTQFQRDTIVKKFRTGKIWVLICTELMARGMDFKGVNYVINFDFP 370
Query: 239 DSGAAYIHRI 248
+ A+Y+HRI
Sbjct: 371 QTLASYVHRI 380
>gi|388578850|gb|EIM19183.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 179/252 (71%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKE---LVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q E ++ G +++I ++ K ++S ++ DILISTPLRL+ AI +++
Sbjct: 68 LAQQIRNELARVGIGRRWRISVLSKANQATMKSDPSTRSKHDILISTPLRLKHAIETEEV 127
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS V +L+LDEAD+L E+G + +D +V ACS+ SI +SLF+ATLP VEE++++I+
Sbjct: 128 DLSNVRHLILDEADRLLEMG-FIDQVDTIVGACSHSSIRKSLFTATLPASVEEVSQNILR 186
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKERAKEL 176
VR+I+GRK+ A++ ++QKL++ G E+GKLLA+RQ A L PPVLIFVQS ERA EL
Sbjct: 187 MPVRMIIGRKDAAAKGVQQKLMYVGREDGKLLAVRQLVQAGELKPPVLIFVQSVERANEL 246
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +DG+R VIH + + QR+ + FR G WVLIATDV+ARG+D + +N V+NYD
Sbjct: 247 FNELVYDGVRVDVIHGERTAAQRDEVIKQFRRGDVWVLIATDVLARGIDVQAINLVLNYD 306
Query: 237 FPDSGAAYIHRI 248
FP S A+Y+HR+
Sbjct: 307 FPQSPASYVHRV 318
>gi|126275853|ref|XP_001386913.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|146325686|sp|A3GHW9.1|ROK1_PICST RecName: Full=ATP-dependent RNA helicase ROK1
gi|126212782|gb|EAZ62890.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 558
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/252 (50%), Positives = 173/252 (68%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q +E + L +G K + ++ K+L + D+ K S DI++STPLRL ++ +K+
Sbjct: 206 LAIQIFQELQILTRGKKLNVAILSKQLANKLNNDIVKASKYDIIVSTPLRLIDIVKNEKV 265
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+VE LV+DEADKLF+ G ++ D ++ C+ I +S+FSAT+P VEE+A SIM
Sbjct: 266 DLSKVEQLVIDEADKLFDQG-FVEQTDDILSHCTYTKIRKSMFSATIPSGVEEMAHSIMR 324
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+GRK AS +I QKLVF GSEEGKLLA+RQ E PP++IF+QS RAK L
Sbjct: 325 DPIRVIIGRKEAASNTIDQKLVFTGSEEGKLLAIRQMIQEGEFKPPIIIFLQSIHRAKAL 384
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 385 FHELLYDKLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYD 444
Query: 237 FPDSGAAYIHRI 248
P + AY+HRI
Sbjct: 445 VPQTAQAYVHRI 456
>gi|254571881|ref|XP_002493050.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|238032848|emb|CAY70871.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|328352938|emb|CCA39336.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 544
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/252 (51%), Positives = 168/252 (66%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LATQ E KL KG I L+ K L +RS + D+++STPLRL +R KI
Sbjct: 199 LATQIHNELLKLTKGKNLIIGLLSKSLSGKLRSDLIKGNKYDVMVSTPLRLIEVVRMGKI 258
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DL V++LVLDEADKLF L+ D V+ CSNP + S++SAT+P+ VEELA S+M
Sbjct: 259 DLREVKHLVLDEADKLF-APEFLEQTDDVLHNCSNPKLQMSIYSATIPEEVEELAHSVMK 317
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
+ +R+ +GRK A+ IKQK+V+ GSEEGKL+ALRQ S PPVLIF+QS RAK L
Sbjct: 318 EPIRINIGRKEAANTQIKQKVVYTGSEEGKLVALRQMVQNSEFKPPVLIFLQSITRAKAL 377
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIHS+ +Q QR+ V+ F+ G WVLI T+VI RG+DFKG+N VINYD
Sbjct: 378 FHELIYDKMNVDVIHSERTQIQRDRVVERFQKGDIWVLICTEVIGRGIDFKGINLVINYD 437
Query: 237 FPDSGAAYIHRI 248
P S AY+HRI
Sbjct: 438 VPTSAEAYVHRI 449
>gi|294657726|ref|XP_460025.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
gi|218511815|sp|Q6BP45.2|ROK1_DEBHA RecName: Full=ATP-dependent RNA helicase ROK1
gi|199432904|emb|CAG88281.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
Length = 550
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 172/252 (68%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E + KG K +I ++ K+L + ++ DIL+STPLRL +I+ + I
Sbjct: 199 LAVQIFQELNTMTKGKKMKIGILSKQLANKINNKIINSSKYDILVSTPLRLIDSIKNETI 258
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
LS+VE LV+DE DKLF+ G ++ D ++ C+N + +S+FSAT+P VEE+A+SIM
Sbjct: 259 SLSKVEQLVIDETDKLFDQG-FVEQTDEILSNCTNTKLRKSMFSATIPSGVEEMAQSIMK 317
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK L
Sbjct: 318 DPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQQGEFKPPIIIFLQSITRAKAL 377
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F++G WVLI TDVIARG+DFKGVN VINYD
Sbjct: 378 FHELLYDRLNVDVIHAERTPKQRDEVIKRFKSGDIWVLITTDVIARGVDFKGVNLVINYD 437
Query: 237 FPDSGAAYIHRI 248
P S AY+HRI
Sbjct: 438 VPQSAQAYVHRI 449
>gi|358058184|dbj|GAA95976.1| hypothetical protein E5Q_02634 [Mixia osmundae IAM 14324]
Length = 498
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 176/250 (70%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q R+ LA+G+ ++ +M +E S + D+LI+TPLRL AI+ K +DLS
Sbjct: 178 LARQVGRQADLLAQGSGWRTCVMGEE--ESGVSESLTADLLITTPLRLIYAIKAKTVDLS 235
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM-HDA 119
VE+L+LDEAD+LFE+ N L+ D ++ AC++P + ++LFSAT+P VE LA++IM DA
Sbjct: 236 TVEHLILDEADRLFEL-NFLEQTDELIAACNHPKLRKALFSATIPSGVELLAKTIMREDA 294
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYG 178
RVIVG +++ + I Q+L F GSE+GKL +LR A+ L+PPVLIF QS ERA++LY
Sbjct: 295 ARVIVGSRDSGAAGITQQLTFVGSEDGKLASLRSLIAKGGLSPPVLIFTQSIERAQDLYR 354
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL+ DG+ V+HSD S+ +R+ AV F AG+ W LI TDV+ARG+DF+ VN V+NYDFP
Sbjct: 355 ELSRDGLPVEVVHSDRSKEERDRAVQRFEAGRAWFLICTDVMARGIDFQNVNLVLNYDFP 414
Query: 239 DSGAAYIHRI 248
A YIHRI
Sbjct: 415 QGAANYIHRI 424
>gi|303286117|ref|XP_003062348.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455865|gb|EEH53167.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 458
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 177/256 (69%), Gaps = 12/256 (4%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDL 59
LA Q+ R L +G N + L+ K ++ ++ K D+L++TPLRL+ I ++K +L
Sbjct: 85 LAQQSHRILTLLCRGTNSLRTCLLTKA-TQNNEMDKV--DVLVATPLRLKSLIEKRKCNL 141
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
S VE+LVLDEADKLFE+G ++ +D V AC P + R+LFSATLP+ VE+LARS+M
Sbjct: 142 SFVEFLVLDEADKLFEMG-FVEQVDAAVAACDGPRVTRALFSATLPETVEQLARSVMTSP 200
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGE 179
+R+ VG +N+A+ +I Q+L+F G E GK+LALRQ ++ + PP+++F QSK+RAK+L +
Sbjct: 201 MRLTVGERNSANATIAQRLLFCGRESGKMLALRQLISDGIKPPIIVFTQSKDRAKQLAKQ 260
Query: 180 LAFDGIRAGVIHSDLSQTQRE-------NAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L DG+R G++H+ +S +R+ VD FRAG W L+ATD++ARGMDF GV V
Sbjct: 261 LQGDGLRLGLVHAGMSDAKRQAQARYAARYVDRFRAGDAWTLVATDLMARGMDFVGVGTV 320
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP S AYIHRI
Sbjct: 321 INYDFPASPHAYIHRI 336
>gi|196015875|ref|XP_002117793.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
gi|190579678|gb|EDV19769.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
Length = 369
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 170/258 (65%), Gaps = 10/258 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRK-- 55
LA Q +EC ++A G+ ++ +KK S + S DILI+TP RL + R
Sbjct: 110 LAKQIYQECNRIALGSGLKVYYLKKCNATSNNFGLQSSKRYDILIATPSRLIQCLSRNYS 169
Query: 56 ---KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
IDLS VE L+ DEADK FE G + + + + C+NP + R+LFSATL VE
Sbjct: 170 TVASIDLSSVELLIFDEADKFFESGRSSFREQVGIIYNYCNNPKVRRALFSATLSFEVEN 229
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
RS + + + VIVGR+N A+E++ Q+L F G E+GKLLALR + +PP L+FVQ K
Sbjct: 230 WCRSHLDNPLHVIVGRRNAAAETVSQELKFVGQEDGKLLALRDIIRKDFDPPALVFVQDK 289
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
ERAK+L+ EL +DGI VIHSD +Q QR+N V +FR GK W+LIAT++++RG+DFKGVN
Sbjct: 290 ERAKQLFQELIYDGINVEVIHSDRTQAQRDNVVKNFRLGKIWILIATELMSRGIDFKGVN 349
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYDFP +G AYIHRI
Sbjct: 350 LVINYDFPITGIAYIHRI 367
>gi|406607780|emb|CCH40885.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 559
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 171/250 (68%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q EC KL+ ++ ++ K + +++ + K DI+ISTPLRL ++ + +
Sbjct: 198 LAQQIYEECNKLSSKLPLKVAILSKSISSKLKNKIIKKDKYDIIISTPLRLIDLVKNEAL 257
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+VE+L+ DEADKLF+ N L+ D ++ C NP + +S+FSAT+P VEE+A IM
Sbjct: 258 DLSKVEHLIFDEADKLFD-KNFLEQTDDILTQCKNPRLRKSMFSATIPSNVEEIANQIMQ 316
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKEL 176
+ +R+I+G K A++ I+QKL F G+EEGKL+A+RQ E PPVLIF+QS RAK L
Sbjct: 317 NTIRLIIGHKEAANQQIEQKLTFCGNEEGKLIAIRQLIQEGEFKPPVLIFLQSITRAKAL 376
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ +Q QR+ ++ FR G+ WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 377 FHELLYDRLNVDVIHAERTQIQRQKIIERFRKGEIWVLICTDVLARGIDFKGVNLVINYD 436
Query: 237 FPDSGAAYIH 246
P+S AY+H
Sbjct: 437 VPNSAQAYVH 446
>gi|164659482|ref|XP_001730865.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
gi|159104763|gb|EDP43651.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
Length = 557
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 176/250 (70%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD-LSKFSCDILISTPLRLRLAIRRKKIDL 59
LA Q + + LA G F+ L+ ++D + K DILI+TPLRL +I +++DL
Sbjct: 202 LAQQIFSQLQLLADGEAFRTCLLTNVTKATSDSIKKKKFDILITTPLRLVHSIEHEELDL 261
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
S+VE LVLDEAD+L E+G L+ D ++ AC+NPS+ ++LFSATLP VEELA++ M D
Sbjct: 262 SQVELLVLDEADRLLELG-FLEQTDAILAACTNPSLRKALFSATLPAGVEELAKTFMVDE 320
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKERAKELYG 178
RV+VG+K++A+ +I+Q+L F GSE+GKL ALR A + PPVL+FVQS +RA+EL+
Sbjct: 321 CRVLVGQKDSATATIEQRLEFTGSEDGKLHALRALIQAGGMQPPVLLFVQSIQRARELFH 380
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL +DG+ VIHS+ + QRE + FR G W+LI T+++ARG+DF GVN VINYDFP
Sbjct: 381 ELVYDGLHVDVIHSERPKAQREAVIQAFRRGDIWLLICTELMARGIDFHGVNLVINYDFP 440
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 441 QTVQSYIHRI 450
>gi|354545812|emb|CCE42540.1| hypothetical protein CPAR2_201830 [Candida parapsilosis]
Length = 568
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 169/250 (67%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q +E + L +G K I ++ K+L + D+ K S DI++STPLRL ++ +KI
Sbjct: 220 LAVQIFQELETLVRGKKLTIGILSKQLASKLNNDIVKASKYDIIVSTPLRLIDIVKNEKI 279
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+VE LV+DEADKLF+ G + D ++ +NP I +S+FSAT+P VEE+A SIM
Sbjct: 280 DLSKVEQLVIDEADKLFDHG-FAEQTDEILNHLTNPKIRKSMFSATIPSGVEEMAHSIMK 338
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I QKLVF G+EEGKLLA+RQ PP++IF+QS RAK L
Sbjct: 339 DPIRVIIGHKEAASTTIDQKLVFTGNEEGKLLAIRQMVQNGEFKPPIIIFLQSITRAKAL 398
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 399 FHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINYD 458
Query: 237 FPDSGAAYIH 246
P S AY+H
Sbjct: 459 VPQSAQAYVH 468
>gi|156373178|ref|XP_001629410.1| predicted protein [Nematostella vectensis]
gi|156216410|gb|EDO37347.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 166/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRL--RLAIRRK 55
LA Q RE LAKG F+I ++ K + S DIL++TP RL L
Sbjct: 128 LAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLVHLLTQEPP 187
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I+L VE+L+LDEADKLFE G + I + +AC+ P I R LFSATL + +EE A
Sbjct: 188 GIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAG 247
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + VRV VG +N+A+ ++ Q+L+F G E GKLLA+R + PPVLIFVQSK+RA
Sbjct: 248 LHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAVRDIVQKGFTPPVLIFVQSKDRA 307
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL +DGI VIHSD +Q QR+N V FR GK WVLIAT+++ RG+DFKGVN VI
Sbjct: 308 KELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVI 367
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S AYIHRI
Sbjct: 368 NYDFPTSAVAYIHRI 382
>gi|449680655|ref|XP_002168566.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Hydra
magnipapillata]
Length = 585
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 166/249 (66%), Gaps = 5/249 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRK-KIDL 59
L+ Q RE ++ G +I ++ K + + +CDILISTP RL +++ DL
Sbjct: 240 LSQQIYREFVRMNAGIGLKIDILTK--AKINNFKSKACDILISTPNRLVHLLKQDFAPDL 297
Query: 60 SRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
VE+LVLDE DKLFE G + + +ACSNPSI R LFSATL + VE+ + +
Sbjct: 298 GIVEWLVLDEGDKLFEDGEAGFRGQVALIYQACSNPSIKRLLFSATLANSVEDWCKDHLD 357
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ VR+ VG +N A+++I Q+L+F G E GKLLA+RQ + PP+L+FVQSK+RAKEL+
Sbjct: 358 NVVRITVGNRNAATDTIDQELIFVGQESGKLLAIRQILHKGFQPPILVFVQSKDRAKELF 417
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +DG+ VIHSD +Q QREN V FR GK W+LIATD++ RG+DFKGVN VINYDF
Sbjct: 418 NELVYDGLNVDVIHSDRTQAQRENIVKCFRTGKIWILIATDLMGRGIDFKGVNMVINYDF 477
Query: 238 PDSGAAYIH 246
P + +YIH
Sbjct: 478 PSTTVSYIH 486
>gi|325180080|emb|CCA14481.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 594
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 167/249 (67%), Gaps = 2/249 (0%)
Query: 1 LATQTTRECKKLAKGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDL 59
LA Q +E ++L G + L K V ++ DILI+TPLRL I++ K+DL
Sbjct: 249 LAVQIQKELRQLTVGYDLHSVVLSKTSAVNFSEKPFPKIDILIATPLRLVHLIQQAKVDL 308
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
S VE + LDEAD+LFE+G + ID ++ +C+ P + R++FSAT+ VEE A S++ D
Sbjct: 309 SGVEVITLDEADRLFELG-FIDQIDEIIASCTFPDVQRTMFSATMLQGVEEAAISVLRDP 367
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGE 179
++ VG KN+ ++SI QKL+F G EEGKL+A++Q L P L+FVQ+KER ELY E
Sbjct: 368 HKIAVGVKNSGAKSIDQKLMFVGKEEGKLVAMKQLGHIGLQIPALLFVQNKERVDELYQE 427
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
L +DGI G IH+D SQ QR+ + +FRAGK WVLI TD+I RG+DFK VN VINYDFP
Sbjct: 428 LLYDGIHVGAIHADRSQMQRDQVLREFRAGKIWVLICTDLICRGLDFKAVNMVINYDFPQ 487
Query: 240 SGAAYIHRI 248
S +YIHRI
Sbjct: 488 SAISYIHRI 496
>gi|402224639|gb|EJU04701.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 589
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 174/250 (69%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q E KLAKG K+++ ++ K + ++ D+LI+TPL L A+ ++
Sbjct: 223 LAMQIHNEALKLAKGRKWKVVVLNKATGNALRDKAARKKVDLLITTPLSLVSALDEGILN 282
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L + +L+LDEAD+L E G LK I+ ++ ACS P I +++FSATLP VE +A + +
Sbjct: 283 LDNIRHLILDEADRLLEEG-FLKQIEAILAACSYPEIQKAVFSATLPAAVEAIANTFLRR 341
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RVIVG K++A+++I Q+L+F GSE GKL ALR E + PPVLIFVQS ERA+EL+
Sbjct: 342 PIRVIVGVKDSATDTIHQELLFCGSEIGKLQALRNLVVEGIQPPVLIFVQSIERAQELFH 401
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL +DG+ V+HS+ ++ QRE+AV FR G+ WVLIAT+++ARGMDFKGVN V+NYDFP
Sbjct: 402 ELLYDGLNVDVVHSERTKAQREDAVRRFRKGEVWVLIATELMARGMDFKGVNLVVNYDFP 461
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 462 QTVQSYIHRI 471
>gi|388857203|emb|CCF49216.1| probable ROK1-ATP-dependent RNA helicase [Ustilago hordei]
Length = 593
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 176/255 (69%), Gaps = 10/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK------ELVRSTDLSKFSCDILISTPLRLRLAIRR 54
LA Q + ++L++ F+I ++ K + + KF DILI+TPLRL A+ +
Sbjct: 243 LAQQIYEQLRRLSEAQNFRICVLTKIADINAHVSDPSKRKKF--DILITTPLRLVHAVEK 300
Query: 55 KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
+++DLS V +LVLDEAD+L E G L+ D ++ ACS+P + ++LFSATLP VEE+A++
Sbjct: 301 EEVDLSNVRHLVLDEADRLLEDG-FLEQTDSILAACSHPHLRKALFSATLPAAVEEMAKT 359
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERA 173
M D RVIVG K++A+E+IKQ+L F GSE+GKL ALR E L PPVL+FVQS +RA
Sbjct: 360 FMIDECRVIVGTKDSATETIKQELQFVGSEDGKLHALRSLIQEGGLKPPVLLFVQSIQRA 419
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
K+L+ EL +DG+ VIHS+ + QRE + F+ G WVLI T+++ARG+DFKGV VI
Sbjct: 420 KDLFHELVYDGLHLDVIHSERPKVQREGVMSAFKRGDLWVLICTELMARGIDFKGVQLVI 479
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 480 NYDFPQSVQSYIHRI 494
>gi|443900149|dbj|GAC77476.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 586
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/253 (50%), Positives = 175/253 (69%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFS-CDILISTPLRLRLAIRRKK 56
LA Q + ++L++G +I ++ K + D SK D+LI+TPLRL A+ +++
Sbjct: 229 LAQQIHDQMRRLSEGRNLRICVLTKPADAGAMNADPSKRKKFDVLITTPLRLVHAVEKEE 288
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DL V +LVLDEAD+L E G L+ D ++ ACS+P + ++LFSATLP VEE+A++ M
Sbjct: 289 VDLGNVRHLVLDEADRLLEDG-FLEQTDAILAACSHPELRKALFSATLPAGVEEMAKTFM 347
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKERAKE 175
D RVIVG K++A+E+I+Q+L F GSE+GKL ALR A L PPVL+FVQS ERAK+
Sbjct: 348 VDECRVIVGTKDSATETIRQELQFVGSEDGKLHALRSLMQAGGLKPPVLLFVQSIERAKD 407
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +DG+ VIHS+ + QRE + F+ G WVLI T++IARG+DFKGV VINY
Sbjct: 408 LFHELVYDGLHVDVIHSERPKLQREGVISAFKRGDVWVLICTELIARGIDFKGVQLVINY 467
Query: 236 DFPDSGAAYIHRI 248
DFP S +YIHRI
Sbjct: 468 DFPQSVQSYIHRI 480
>gi|45187850|ref|NP_984073.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|74694371|sp|Q75AE1.1|ROK1_ASHGO RecName: Full=ATP-dependent RNA helicase ROK1
gi|44982634|gb|AAS51897.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|374107288|gb|AEY96196.1| FADL024Cp [Ashbya gossypii FDAG1]
Length = 569
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KLA K + L+ K L +++ +S DI+ISTPLRL
Sbjct: 206 LANQIFDECSKLAQRIFLEKKRPLSVALLSKSLAAKLKNQIVSDKKYDIIISTPLRLIDI 265
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V+YL+ DEADKLF+ ++ D ++ ACS+P+I + LFSATLP VEEL
Sbjct: 266 VKSESLDLSAVKYLIFDEADKLFD-KTFVEQTDDILSACSHPNISKVLFSATLPSSVEEL 324
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL-NPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E + PPV+IF++S
Sbjct: 325 AQSIMTDPVRVIIGHKEAANTNIEQKLVFCGNEEGKLVAIRQLIQEGMFRPPVIIFLESI 384
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK L+ EL +D + VIH++ +Q QRE ++ F++G W LI TDV+ARG+DFKG+N
Sbjct: 385 TRAKALFHELLYDKLNVDVIHAERTQVQREKIIERFKSGDLWCLICTDVLARGIDFKGIN 444
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 445 LVINYDVPRSAQAYVH 460
>gi|320583779|gb|EFW97992.1| ATP-dependent RNA helicase ROK1 [Ogataea parapolymorpha DL-1]
Length = 547
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q E KL KG+ QI ++ K + +R+ L+ DIL+STPLRL I + +
Sbjct: 195 LAAQIFNELTKLCKGSSLQIGILNKSIAGKLRNRVLASSKFDILVSTPLRLIDLIGDEVM 254
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+VE +V DE DKLFE ++ D ++ ACSNP + RS+FSAT+ VEELA SIM+
Sbjct: 255 DLSKVEEVVFDEVDKLFE-SKFVEQTDRILTACSNPKLRRSIFSATITSSVEELANSIMN 313
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
+R+I+G K A+ +I+QKLVF G+E GKLLALR+ + PPV+IF+QS RAK L
Sbjct: 314 SPIRIIIGHKEAANSNIEQKLVFCGNEHGKLLALREMLRKGEFKPPVIIFLQSITRAKAL 373
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ +Q QRE +D FR G+ W LI TDV+ARG+DFKG+N VINYD
Sbjct: 374 FHELLYDRLNVDVIHAERTQLQRETIIDRFRKGELWCLICTDVLARGIDFKGINLVINYD 433
Query: 237 FPDSGAAYIH 246
P S AY+H
Sbjct: 434 VPTSAQAYVH 443
>gi|301112328|ref|XP_002905243.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095573|gb|EEY53625.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 709
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 173/253 (68%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSC--DILISTPLRLRLAIRRK 55
LA Q E +LA G K I L+ K + S SK + D+LI+TPLRL I+
Sbjct: 331 LAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQES 390
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
K+DLS VE + LDEAD+L E+G ++ +D + AC++P + R++FSAT+ + VEELA+++
Sbjct: 391 KVDLSTVEMVCLDEADRLLELG-FVEQVDEIFAACTHPKVQRAMFSATMLEGVEELAQTV 449
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ D V+V VG KN + +I QKLVF G EEGKL+A++Q + L P L+FVQ+KERA E
Sbjct: 450 LRDPVKVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLQQGLQLPALLFVQNKERANE 509
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
LY EL +DG+ G +H+D ++ QR++ + FR G+ WVLI TD+++RGMDFK VN VINY
Sbjct: 510 LYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINY 569
Query: 236 DFPDSGAAYIHRI 248
DFP S +YIHRI
Sbjct: 570 DFPQSAVSYIHRI 582
>gi|71021341|ref|XP_760901.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
gi|46100997|gb|EAK86230.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
Length = 1448
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 176/257 (68%), Gaps = 10/257 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL-------VRSTDLSKFS-CDILISTPLRLRLAI 52
LA Q + ++L++G F+I ++ S D SK D+LI+TPLRL AI
Sbjct: 1076 LAQQIYDQLRRLSEGQNFRICVLTSTSDATAVANSSSADASKRKKYDVLITTPLRLVHAI 1135
Query: 53 RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+++++LS V +LVLDEAD+L E G L+ D ++ ACS+P + ++LFSATLP VEE+A
Sbjct: 1136 EKEQVELSNVRHLVLDEADRLLEDG-FLQQTDSILAACSHPQLRKALFSATLPAGVEEMA 1194
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKE 171
++ M D RVIVG K++A+E+I+Q+L F GSE+GKL ALR + L PPVL+FVQS E
Sbjct: 1195 KTFMIDECRVIVGTKDSATETIQQELQFVGSEDGKLHALRSLILQGGLKPPVLLFVQSIE 1254
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RAK+L+ EL +DG+ VIHS+ + QRE + F+ G WVLI T+++ARG+DFKGV
Sbjct: 1255 RAKDLFHELVYDGLHVDVIHSERPKLQRERVISAFKRGDIWVLICTELMARGIDFKGVQL 1314
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S +YIHRI
Sbjct: 1315 VINYDFPQSVQSYIHRI 1331
>gi|448525693|ref|XP_003869174.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis Co
90-125]
gi|380353527|emb|CCG23037.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis]
Length = 547
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q +E + L +G K I ++ K+L + D+ K S DI++STPLRL ++ +KI
Sbjct: 199 LAVQIFQELETLVRGKKLTIGILSKQLASKLNNDIVKASKYDIIVSTPLRLIDIVKNEKI 258
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+V+ LV+DEADKLF+ G + D ++ +N I +S+FSAT+P VEE+A SIM
Sbjct: 259 DLSKVDQLVIDEADKLFDHG-FAEQTDEILNHLTNTKIRKSMFSATIPSGVEEMAHSIMK 317
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I QKL+F G+EEGKLLA+RQ PP++IF+QS RAK L
Sbjct: 318 DPIRVIIGHKEAASSTIDQKLIFTGNEEGKLLAIRQMVQNGEFKPPIIIFLQSITRAKAL 377
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 378 FHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINYD 437
Query: 237 FPDSGAAYIH 246
P S AY+H
Sbjct: 438 VPQSAQAYVH 447
>gi|254582647|ref|XP_002499055.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
gi|238942629|emb|CAR30800.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
Length = 556
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 175/258 (67%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA+QT EC KL+ K Q+ ++ K L +R+ +S DI+ISTPLRL
Sbjct: 202 LASQTFVECVKLSRKIFLDKKRPLQVAILSKSLSAKLRNKVVSDKKYDIIISTPLRLIDL 261
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V +LV DEADKLF+ ++ D ++ ACS+P + +S+FSAT+P VEE+
Sbjct: 262 VKNEALDLSNVRHLVFDEADKLFD-KTFVEQTDDILSACSDPRLRKSMFSATIPSNVEEI 320
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I Q+LV+ G+EEGKL+A+R+ E PPV+IF++S
Sbjct: 321 AQSIMTDPVRVIIGHKEGANANIDQRLVYCGNEEGKLIAIRRMVQEGEFKPPVIIFLESI 380
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +DG+ V+H++ +Q QR+ ++ F+ G W LI TDV+ARG+DFKG+N
Sbjct: 381 TRAKALYHELMYDGLNVDVLHAERTQMQRDKIIERFKTGDLWCLICTDVLARGIDFKGIN 440
Query: 231 CVINYDFPDSGAAYIHRI 248
V+NYD P + AY+HRI
Sbjct: 441 LVVNYDVPQTAQAYVHRI 458
>gi|167534955|ref|XP_001749152.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772305|gb|EDQ85958.1| predicted protein [Monosiga brevicollis MX1]
Length = 543
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 161/229 (70%), Gaps = 1/229 (0%)
Query: 20 IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL 79
I + K L++ T + DIL++TP+RL A++ K +DLS V +LV+DEAD+LFE G
Sbjct: 208 IPVCPKVLLKLTWCMRARPDILVATPMRLVHALQHKLVDLSAVRWLVVDEADRLFENG-F 266
Query: 80 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV 139
+ ID V+ ACS+ +LFSAT+P+ VE LA++++HD VR++VG N A++ ++Q+L
Sbjct: 267 EQQIDEVIAACSHKKRRIALFSATMPERVETLAQTVLHDYVRIVVGAANAANQDVEQELK 326
Query: 140 FAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQR 199
F GSEEGK+ A+RQ L PPVLIFVQSK RA++L+ EL ++ + VIH+D +Q QR
Sbjct: 327 FVGSEEGKMTAIRQMLQTGLQPPVLIFVQSKSRAQQLFEELVYENVNVDVIHADRTQQQR 386
Query: 200 ENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ V FR G+ WVLI TD++ RG+DFK VN VINYDFP + YIHR+
Sbjct: 387 DEVVKRFREGQVWVLICTDLMGRGVDFKAVNVVINYDFPPNATEYIHRV 435
>gi|327291685|ref|XP_003230551.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Anolis
carolinensis]
Length = 487
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRR--K 55
LA+QT RE KL++G F+I ++ K + S D+L++TP RL +++
Sbjct: 152 LASQTHRELLKLSEGTGFRIHMIHKAAEAAKKFGPKSSQKFDVLVTTPNRLIYLLKQDPP 211
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLSRVE+LV+DE+DKLFE G + + ACS+P R+LFSAT VE+ R
Sbjct: 212 AIDLSRVEWLVVDESDKLFEEGKTGFRDQLATLFSACSSPLAKRALFSATFAHDVEQWCR 271
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V V +G +N A+E++ Q+L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 272 LNLDSVVSVSIGARNAAAETVDQELLFVGSETGKLLAMRDFVKKGFAPPVLVFVQSIERA 331
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI A VIH+D +Q QR++ V FRAGK WVLI T ++ARGMDFKGVN VI
Sbjct: 332 KELFRELIYEGINADVIHADRTQQQRDSVVHGFRAGKIWVLICTALLARGMDFKGVNVVI 391
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 392 NYDFPSSAVEYIHRI 406
>gi|152060505|sp|A5DIX5.2|ROK1_PICGU RecName: Full=ATP-dependent RNA helicase ROK1
Length = 537
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-----SKFSCDILISTPLRLRLAIRRK 55
LA Q + + +G+ + L+ K++ +KF D+LI TPLRL ++++
Sbjct: 190 LAIQIYQTLAPMCRGSNLNVTLLSKQVASKISSSIISANKF--DVLICTPLRLIDLVKKE 247
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S+FSAT+P VEE+A SI
Sbjct: 248 QVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSI 306
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK
Sbjct: 307 MKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQGEFKPPIIIFLQSIPRAK 366
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE A+ F+ G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 367 ALFHELIYDKLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVIN 426
Query: 235 YDFPDSGAAYIHRI 248
YD P + AY+HRI
Sbjct: 427 YDVPQTSQAYVHRI 440
>gi|302843242|ref|XP_002953163.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
gi|300261550|gb|EFJ45762.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
Length = 602
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 163/243 (67%), Gaps = 4/243 (1%)
Query: 7 RECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLV 66
R K L G + L+ K +D SK D+L++ PLRL + K+ L++ Y+V
Sbjct: 326 RVLKLLLPGTGLRGCLLTKSTAAGSDFSK--VDVLLANPLRLVKMVEEGKVQLAQCRYVV 383
Query: 67 LDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR 126
LDEADKLFE+G + ID ++ A + +VR+LFSATLP+ VE+LARS++ +R+ VG
Sbjct: 384 LDEADKLFELG-FMDQIDALLAAAQHRDVVRALFSATLPERVEDLARSVLQQPLRITVGL 442
Query: 127 KNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGI 185
+N A +++Q+L F G E GKLLALRQ A+ L PPVL+FV SKERAK L+ EL +DG+
Sbjct: 443 RNAAVSNVRQRLHFVGREAGKLLALRQLLADGGLVPPVLVFVGSKERAKALHRELMYDGV 502
Query: 186 RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYI 245
I + Q R AVD+FRAG+TWVLIATD+I RGMDF GVN VINYDFP S A Y+
Sbjct: 503 HVDSITAGQPQAARNAAVDNFRAGRTWVLIATDLIGRGMDFIGVNTVINYDFPRSTADYV 562
Query: 246 HRI 248
HRI
Sbjct: 563 HRI 565
>gi|401842122|gb|EJT44393.1| ROK1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 558
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 178/258 (68%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA+Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 205 LASQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVISDKKYDIIISTPLRLIDV 264
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++++ +DLSRV++L+ DEADKLF+ ++ D ++ AC P++ +++FSAT+P VEE+
Sbjct: 265 VKKEALDLSRVKHLIFDEADKLFD-KTFVEQSDDILSACKEPALRKAMFSATIPSSVEEI 323
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D +RVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 324 AQSIMMDPIRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 383
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F++G+ W LI TDV+ARG+DFKGVN
Sbjct: 384 ARAKALYHELMYDRINVDVIHAERTVLQRDRIIERFKSGELWCLICTDVLARGIDFKGVN 443
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P+S AY+HRI
Sbjct: 444 LVINYDVPESSQAYVHRI 461
>gi|365760811|gb|EHN02500.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 178/258 (68%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA+Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 205 LASQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVISDKKYDIIISTPLRLIDV 264
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++++ +DLSRV++L+ DEADKLF+ ++ D ++ AC P++ +++FSAT+P VEE+
Sbjct: 265 VKKEALDLSRVKHLIFDEADKLFD-KTFVEQSDDILSACKEPALRKAMFSATIPSSVEEI 323
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D +RVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 324 AQSIMMDPIRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 383
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F++G+ W LI TDV+ARG+DFKGVN
Sbjct: 384 ARAKALYHELMYDRINVDVIHAERTVLQRDRIIERFKSGELWCLICTDVLARGIDFKGVN 443
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P+S AY+HRI
Sbjct: 444 LVINYDVPESSQAYVHRI 461
>gi|149239430|ref|XP_001525591.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060503|sp|A5E1N2.1|ROK1_LODEL RecName: Full=ATP-dependent RNA helicase ROK1
gi|146451084|gb|EDK45340.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 553
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q ++ + ++KG I ++ K+L S D+ K S DIL+STPLRL ++ K+
Sbjct: 204 LAVQIFQQLEIISKGKGLNIAILSKQLAGKISNDVVKASKYDILVSTPLRLIDVVKLGKV 263
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+V LV+DEADKLF+ G + D ++ C+N I +S+FSAT+P VEE+A SIM
Sbjct: 264 DLSKVTQLVIDEADKLFDHG-FAEQTDELLSHCTNVKIRKSMFSATIPSGVEEMAHSIMK 322
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ PP++IF+QS RAK L
Sbjct: 323 DPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQNGEFKPPIIIFLQSITRAKAL 382
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 383 FHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYD 442
Query: 237 FPDSGAAYIH 246
P S AY+H
Sbjct: 443 VPQSAQAYVH 452
>gi|146419062|ref|XP_001485496.1| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-----SKFSCDILISTPLRLRLAIRRK 55
LA Q + + +G+ + L+ K++ +KF D+LI TPLRL ++++
Sbjct: 329 LAIQIYQTLAPMCRGSNLNVTLLSKQVASKISSSIISANKF--DVLICTPLRLIDLVKKE 386
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S+FSAT+P VEE+A SI
Sbjct: 387 QVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSI 445
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK
Sbjct: 446 MKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQGEFKPPIIIFLQSIPRAK 505
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE A+ F+ G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 506 ALFHELIYDKLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVIN 565
Query: 235 YDFPDSGAAYIHRI 248
YD P + AY+HRI
Sbjct: 566 YDVPQTSQAYVHRI 579
>gi|190346939|gb|EDK39127.2| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-----SKFSCDILISTPLRLRLAIRRK 55
LA Q + + +G+ + L+ K++ +KF D+LI TPLRL ++++
Sbjct: 329 LAIQIYQTLAPMCRGSNLNVTLLSKQVASKISSSIISANKF--DVLICTPLRLIDLVKKE 386
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S+FSAT+P VEE+A SI
Sbjct: 387 QVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSI 445
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK
Sbjct: 446 MKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQGEFKPPIIIFLQSIPRAK 505
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE A+ F+ G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 506 ALFHELIYDKLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVIN 565
Query: 235 YDFPDSGAAYIHRI 248
YD P + AY+HRI
Sbjct: 566 YDVPQTSQAYVHRI 579
>gi|367015264|ref|XP_003682131.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
gi|359749793|emb|CCE92920.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
Length = 551
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 174/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KLA + Q+ L+ K L +++ +S DIL++TPLRL
Sbjct: 198 LANQIFIECSKLAQKVFLDRKRPLQVALLSKSLNAKLKNKAVSDKKYDILVTTPLRLIDV 257
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++++ DEADKLF+ ++ D ++ +C+NP + +S+FSAT+P VEE+
Sbjct: 258 VKNEALDLSGVKHIIFDEADKLFD-KTFVEQTDDILSSCNNPKLRKSMFSATIPSNVEEI 316
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A SIM D VRVI+G K+ A+ +IKQ +++ G+EEGKL+A+RQ E PPV+IF++S
Sbjct: 317 ANSIMMDPVRVIIGHKDAANANIKQDVIYCGNEEGKLIAIRQLVQEGEFRPPVIIFLESI 376
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +DG+ VIH++ +Q QRE ++ F++G+ W LI TDV+ARG+DFKGVN
Sbjct: 377 TRAKALYHELMYDGLNVDVIHAERTQIQREKIIESFKSGELWCLICTDVLARGVDFKGVN 436
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 437 LVINYDVPRTAQAYVH 452
>gi|50291793|ref|XP_448329.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661150|sp|Q6FN65.1|ROK1_CANGA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49527641|emb|CAG61290.1| unnamed protein product [Candida glabrata]
Length = 565
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLAK------GNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LATQ EC KL+K Q+ ++ K L +R+ +S D++ISTPLRL
Sbjct: 206 LATQIFNECVKLSKRIYLDKKRPLQVAILSKSLGAKLRNKVISDKKYDLIISTPLRLIDV 265
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++L+ DEADKLF+ ++ D ++ +C++PS+ +S+FSAT+P VEE
Sbjct: 266 VKNEALDLSNVKHLIFDEADKLFD-KTFIEQTDDILNSCTDPSMRKSMFSATIPSSVEET 324
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A SIM+D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ + PP++IF++S
Sbjct: 325 ANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQQGEFKPPIIIFLESI 384
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QRE ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 385 ARAKALYHELMYDRINVDVIHAERTAIQREKIIERFKTGELWCLICTDVLARGIDFKGVN 444
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 445 LVINYDVPTTAQAYVH 460
>gi|68490782|ref|XP_710786.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|68490809|ref|XP_710773.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432016|gb|EAK91525.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432030|gb|EAK91538.1| potential DEAD box RNA helicase [Candida albicans SC5314]
Length = 496
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 169/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKK 56
LA Q +E + + +G K + ++ K+L + + DI++STPLRL +++
Sbjct: 133 LAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGN 192
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS++E L++DEADKLF+ G + D ++ C+NP I +S+FSAT+P VEE+A SIM
Sbjct: 193 MDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNPKIRKSIFSATIPSSVEEMAHSIM 251
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 252 KDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAKA 311
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 312 LFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINY 371
Query: 236 DFPDSGAAYIHRI 248
D P S AY+HRI
Sbjct: 372 DVPQSAQAYVHRI 384
>gi|298708634|emb|CBJ26121.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 516
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 171/266 (64%), Gaps = 20/266 (7%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS----------TDLSKFSCDILISTPLRLRL 50
LA Q R+ +L++G + ++ L+ K LS + DI++STP+RL
Sbjct: 153 LAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGY--DIVVSTPMRLVA 210
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGN--------LLKHIDPVVKACSNPSIVRSLFSA 102
+R + + L+ VE +VLDEADKLF+ G + +D V+ ACS+ + R+LFSA
Sbjct: 211 LVRERAVCLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSA 270
Query: 103 TLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP 162
T+ V+EL+ S++ D + + VG +N + I Q+LV+ G EEGKLLA+RQ E L PP
Sbjct: 271 TVGQQVKELSESVLRDPIFLTVGTQNAGAADIDQRLVYVGREEGKLLAIRQLVQEGLRPP 330
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
VL+F+QSK+RAK L+ EL +DGI V+H+ +Q QR+N + FR G+ WVLI TD++AR
Sbjct: 331 VLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVAR 390
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+DFKGVN VINYDFP S +YIHRI
Sbjct: 391 GIDFKGVNMVINYDFPQSAVSYIHRI 416
>gi|307167458|gb|EFN61031.1| Probable ATP-dependent RNA helicase DDX52 [Camponotus floridanus]
Length = 498
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC KL+ G F+I ++ K L + S DILI+TP RL + +
Sbjct: 152 LAKQTYRECLKLSDGYDFRIHIIGKINQALTKYGPSSSQKFDILITTPKRLVFLLNQDPP 211
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L+ VE+L++DEADKLFE G + +D + +AC+N ++ R +FSAT V + R
Sbjct: 212 AISLNNVEWLIVDEADKLFEEGIRGFREQLDEITRACTNTNLHRGMFSATNTPAVSKWCR 271
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M + V VG +N A++ + Q+++F GSE GKLLA R + ++PPVL+FVQSKERA
Sbjct: 272 RNMKGLITVTVGHRNAATDMVDQEILFVGSERGKLLAFRNMIQKGISPPVLVFVQSKERA 331
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI VIH+D + TQR+N V FR G+ WVLI T++++RG+DFKGVN VI
Sbjct: 332 QELFNELIYDGINVDVIHADRTTTQRDNIVRCFREGQIWVLICTELMSRGIDFKGVNLVI 391
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 392 NYDFPPSAISYIHRI 406
>gi|238878350|gb|EEQ41988.1| ATP-dependent RNA helicase ROK1 [Candida albicans WO-1]
Length = 640
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 169/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKK 56
LA Q +E + + +G K + ++ K+L + + DI++STPLRL +++
Sbjct: 277 LAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGN 336
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS++E L++DEADKLF+ G + D ++ C+NP I +S+FSAT+P VEE+A SIM
Sbjct: 337 MDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNPKIRKSIFSATIPSSVEEMAHSIM 395
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 396 KDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAKA 455
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + V+H++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 456 LFHELLYDRLNVDVVHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINY 515
Query: 236 DFPDSGAAYIHRI 248
D P S AY+HRI
Sbjct: 516 DVPQSAQAYVHRI 528
>gi|363756464|ref|XP_003648448.1| hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891648|gb|AET41631.1| Hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
Length = 569
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 174/258 (67%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA+Q EC KL+ K + L+ K L +++ +S DI++STPLRL
Sbjct: 199 LASQIFTECSKLSHRIFLEKRRPLNVALLSKSLSGKLKNKVVSDKKYDIIVSTPLRLIDL 258
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++L+ DEADKLF+ L+ D ++ +CSN + +S+FSAT+P VEE+
Sbjct: 259 VKERALDLSCVKHLIFDEADKLFD-KTFLEQTDDILSSCSNNKLQKSMFSATIPSHVEEI 317
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D +R+I+G K A+ +I+QKLVF G+EEGKL+A+RQ E PPV+IF++S
Sbjct: 318 AQSIMMDPIRIIIGHKEAANTNIEQKLVFCGNEEGKLIAIRQLIMEGEFRPPVIIFLESI 377
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK L+ EL +D + VIH++ +Q QR+ ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 378 TRAKALFHELVYDKLNVDVIHAERTQMQRDKIIERFKSGDLWCLICTDVLARGVDFKGVN 437
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P S AY+HRI
Sbjct: 438 LVINYDIPRSAQAYVHRI 455
>gi|241950191|ref|XP_002417818.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223641156|emb|CAX45533.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 563
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/253 (46%), Positives = 168/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKK 56
LA Q +E + + +G K + ++ K+L + + DI++STPLRL +++
Sbjct: 209 LAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGN 268
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS++E L++DEADKLF+ G + D ++ C NP I +S+FSAT+P VEE+A SIM
Sbjct: 269 MDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCINPKIRKSIFSATIPSSVEEMAHSIM 327
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 328 KDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAKA 387
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 388 LFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINY 447
Query: 236 DFPDSGAAYIHRI 248
D P S AY+HRI
Sbjct: 448 DVPQSAQAYVHRI 460
>gi|444317483|ref|XP_004179399.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
gi|387512440|emb|CCH59880.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
Length = 579
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 177/258 (68%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 211 LANQIFLECVKLSRSIFFEKKRPLQVALLSKSLSAKLKNKVISNSKYDIIISTPLRLIDV 270
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
+R + +DLS+V++L+ DEADKLF+ ++ D ++ +C++P++ +S+FSAT+P VE++
Sbjct: 271 VRNESLDLSKVKHLIFDEADKLFD-KTFVEQTDDILSSCTDPALRKSMFSATIPSSVEDI 329
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+S+M+D VRV++G K A+ +I+QKL+F G+EEGKL+A++Q E PPV+IF++S
Sbjct: 330 AQSLMNDPVRVVIGHKEAANSNIEQKLIFCGNEEGKLIAIKQLTQEGEFKPPVIIFLESI 389
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY E+ +D + VIH++ + QR ++ F++G+ W LI TDV+ARG+DFKGVN
Sbjct: 390 TRAKALYHEMMYDRLNVDVIHAERTTIQRNKIIERFKSGELWCLICTDVLARGVDFKGVN 449
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P S AY+HRI
Sbjct: 450 LVINYDVPRSSQAYVHRI 467
>gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Nasonia
vitripennis]
Length = 643
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC +L++G F++ ++ K L + S DILI+TP RL + ++
Sbjct: 219 LAKQTYRECIRLSEGRGFRVHIISKINQALTKYGPKSSQKFDILITTPKRLVFLLNQEPP 278
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L+ VE+L++DEADKLFE G ++ + KAC+N +I R +FSAT V + R
Sbjct: 279 AISLNNVEWLIVDEADKLFEEGTRGFKNQLEEISKACTNENIRRGMFSATNTPAVTKWCR 338
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V V +G++N+A++ ++Q+L+F GSE GKL+A R L PPVL+FVQSKERA
Sbjct: 339 HNLKGLVTVTIGQRNSAADLVEQQLLFVGSERGKLVAFRNIIQRGLTPPVLVFVQSKERA 398
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI +IHSD +QTQR+N V FR GK WVLI T+++ RG+DF GVN VI
Sbjct: 399 QELFKELIYDGINVDLIHSDRTQTQRDNVVRCFREGKIWVLICTELMGRGIDFIGVNLVI 458
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 459 NYDFPPSAISYIHRI 473
>gi|156836663|ref|XP_001642382.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
gi|160358656|sp|A7TT88.1|ROK1_VANPO RecName: Full=ATP-dependent RNA helicase ROK1
gi|156112896|gb|EDO14524.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 570
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +R+ +S DI++STPLRL
Sbjct: 213 LANQIFLECIKLSNRIFLDKKRPLQVALLSKSLSAKLRNKVISDKKYDIIVSTPLRLIDV 272
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ +CS+ S+ +S+FSAT+P VEE+
Sbjct: 273 VKNEALDLSQVKHLIFDEADKLFD-KTFVEQSDDILSSCSHSSLRKSMFSATIPSNVEEI 331
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ SI+QKLVF G+EEGKL+A++Q E PPV+IF++S
Sbjct: 332 AKSIMMDPVRVIIGHKEAANTSIEQKLVFCGNEEGKLIAIKQLVQEGEFKPPVIIFLESI 391
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY E+ +D + VIH++ +Q QR ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 392 TRAKALYHEMMYDSLNVDVIHAERTQVQRNKIIERFKSGDLWCLITTDVLARGVDFKGVN 451
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 452 LVINYDVPRTAQAYVH 467
>gi|321466548|gb|EFX77543.1| hypothetical protein DAPPUDRAFT_321368 [Daphnia pulex]
Length = 581
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 167/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK---KELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC KL +G + ++ K + S DILI+TP RL + ++
Sbjct: 217 LANQTHRECVKLTEGIGLRCHVIDNVGKATQKFGPKSSQRFDILITTPNRLVFLLSQEPP 276
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L VE+L++DE+DKLFE G + + +AC + I R+ FSAT V+E +
Sbjct: 277 AISLKNVEWLIVDESDKLFEEGRQGFRDQLGAIYRACDSNQIRRAFFSATFAFDVQEWCK 336
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V + +G+KN+ASE ++Q+L+FAGSE GKL+A R E LNPPVL+FVQ+KERA
Sbjct: 337 LNLDNVVMLTIGQKNSASEKVEQQLIFAGSEGGKLMAFRNLIVEGLNPPVLVFVQTKERA 396
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KELY EL +DGI VIH++ SQ QR+N V FR+G+ WVLI T+++ RG+DFKGVN V+
Sbjct: 397 KELYTELVYDGINVDVIHAERSQLQRDNVVKSFRSGQIWVLICTELMGRGIDFKGVNLVV 456
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 457 NYDFPPSAISYIHRI 471
>gi|119351039|gb|ABL63415.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 172/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL ++++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|119351037|gb|ABL63414.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 172/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL ++++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|242005744|ref|XP_002423722.1| predicted protein [Pediculus humanus corporis]
gi|212506907|gb|EEB10984.1| predicted protein [Pediculus humanus corporis]
Length = 1130
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 169/254 (66%), Gaps = 6/254 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRK--K 56
LA QT REC +L++G + +I ++KK + + S S DILI+TP RL ++++ K
Sbjct: 833 LARQTYRECLRLSEGTRLKINIIKKVTLDKENYSNTSKKFDILITTPNRLVYLLKQEPPK 892
Query: 57 IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
++L VE+L++DE+DKLFE G + + AC + I R++FSAT + + R
Sbjct: 893 VNLKSVEWLIVDESDKLFEAGIRGFRDQLAVIYNACDSSVIKRAMFSATQTPHLTKWCRR 952
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ + V + VG +N+A E++KQ+L+F G E GKL+A R L PPVL+FVQSKERA+
Sbjct: 953 NLKNLVLINVGVRNSAVETVKQELLFVGCEAGKLVAFRNLINRGLTPPVLVFVQSKERAQ 1012
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
EL+ EL +DGI VIHSD +Q QR+N + FR GK WVLI T+++ RG+DFKGVN V+N
Sbjct: 1013 ELFNELVYDGINVDVIHSDRTQKQRDNVIRSFREGKIWVLICTELMGRGIDFKGVNLVVN 1072
Query: 235 YDFPDSGAAYIHRI 248
YDFP S +YIHRI
Sbjct: 1073 YDFPPSSVSYIHRI 1086
>gi|332374956|gb|AEE62619.1| unknown [Dendroctonus ponderosae]
Length = 588
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 173/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM---KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA+QT REC +L++G F+I ++ K L + S DILI+TP RL +++
Sbjct: 199 LASQTQRECVRLSEGIGFRIHIIGKVNKALTQYGAKSNKKYDILITTPNRLCFLLKQDPP 258
Query: 57 -IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I LS V++LV+DEADKLFE G+ +D +++ACS+ ++FSAT V +
Sbjct: 259 AIQLSNVQWLVIDEADKLFEEGSRSFRDQLDQILQACSSSDRKVAMFSATHTPVVAKWCV 318
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M +RV VG++N A++++ QKL F GSE+GKL+A+R + ++PPVLIFVQSKERA
Sbjct: 319 HNMPGLLRVTVGQRNAATDTVDQKLQFVGSEQGKLIAIRDLIRQGISPPVLIFVQSKERA 378
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++L+ EL +DGI IH+D +QTQR+N V FR GK WVLI T+++ARG+DFKGVN V+
Sbjct: 379 QQLFNELIYDGIMVDAIHADRTQTQRDNVVKCFREGKIWVLICTELMARGIDFKGVNLVV 438
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +Y+HRI
Sbjct: 439 NYDFPPSTISYVHRI 453
>gi|58177858|gb|AAH89107.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 172/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL ++++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|16758984|ref|NP_445977.1| probable ATP-dependent RNA helicase DDX52 [Rattus norvegicus]
gi|34582286|sp|Q99PT0.1|DDX52_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; Short=rROK1L;
AltName: Full=DEAD box protein 52
gi|12862376|dbj|BAB32441.1| ROK1-like protein [Rattus norvegicus]
gi|149053684|gb|EDM05501.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 172/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL ++++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|157073998|ref|NP_001096708.1| probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|160380636|sp|A5D7C1.1|DDX52_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=DEAD box protein 52
gi|146186791|gb|AAI40502.1| DDX52 protein [Bos taurus]
gi|296477012|tpg|DAA19127.1| TPA: probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|440912331|gb|ELR61911.1| Putative ATP-dependent RNA helicase DDX52 [Bos grunniens mutus]
Length = 596
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE KL++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 244 LASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ R
Sbjct: 304 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCR 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V VG +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 364 LNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>gi|189235329|ref|XP_975300.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 553
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM---KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC +L++G F + ++ K L++ S DILI+TP R+ +++ +
Sbjct: 196 LAKQTQRECIRLSEGKGFHVHVISKINKALIQYGPNSSQKFDILITTPNRVCFLLKQDQA 255
Query: 57 -IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ L+ +++LV+DEADKLFE GN + +D ++ AC+N ++FSAT V +
Sbjct: 256 ALSLANIKWLVIDEADKLFETGNRGFREQLDQILNACTNKEKKVAMFSATYTPMVAKWCV 315
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M VR+ VG++N A++++ Q+L+F G+E+GKLLA R + L PPVL+FVQSK+RA
Sbjct: 316 HNMKGLVRITVGQRNAAADTVDQELLFVGNEQGKLLAFRDLVKKGLTPPVLVFVQSKDRA 375
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++L+ EL +DGI IH+D +Q QR+N V FR G+ WVLI T+++ARG+DFKGVN VI
Sbjct: 376 QQLFNELIYDGINVDAIHADRTQLQRDNTVRSFREGRIWVLICTELMARGIDFKGVNLVI 435
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +Y+HR+
Sbjct: 436 NYDFPPSAISYVHRV 450
>gi|343426178|emb|CBQ69709.1| probable ROK1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 614
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 172/259 (66%), Gaps = 14/259 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK----------ELVRSTDLSKFSCDILISTPLRLRL 50
LA Q + ++L++G F+I ++ K + KF D+LI+TPLRL
Sbjct: 253 LAQQIYDQLRRLSEGRNFRICVLTKTSDASAVANASSADPSKRKKF--DVLITTPLRLVH 310
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
A+ ++++DLS V +LVLDEAD+L E G L D ++ ACS+ + ++LFSATL VEE
Sbjct: 311 AVEKEEVDLSNVRHLVLDEADRLLEEG-FLAQTDTILAACSHARLRKALFSATLLAGVEE 369
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQS 169
+AR+ M D RVIVG K+ A+E+I+Q+L F GSE+GKL ALR + L PPVL+FVQS
Sbjct: 370 MARTFMVDECRVIVGTKDAATETIQQELQFVGSEDGKLHALRALMQQGGLKPPVLLFVQS 429
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
ERAK L+ EL +DG+ VIHS+ + QRE+ V FR G WVLI T+++ARG+DFKGV
Sbjct: 430 IERAKHLFHELVYDGLHVDVIHSERPKLQRESVVAAFRRGDVWVLICTELMARGIDFKGV 489
Query: 230 NCVINYDFPDSGAAYIHRI 248
VINYDFP S +YIHRI
Sbjct: 490 QLVINYDFPQSVQSYIHRI 508
>gi|281346401|gb|EFB21985.1| hypothetical protein PANDA_014345 [Ailuropoda melanoleuca]
Length = 524
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSQKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A+E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVITVSIGARNSAAETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|74654532|sp|Q9Y7C4.1|ROK1_CANAL RecName: Full=ATP-dependent RNA helicase CHR1
gi|4589366|gb|AAD26468.1| DEAD box RNA helicase [Candida albicans]
Length = 578
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 168/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKK 56
LA Q +E + + +G K + ++ K+L + + DI++STPLRL +++
Sbjct: 215 LAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGN 274
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS++E L++DEADKLF+ G + D ++ C+N I +S+FSAT+P VEE+A SIM
Sbjct: 275 MDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNLKIRKSIFSATIPSSVEEMAHSIM 333
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 334 KDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAKA 393
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 394 LFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINY 453
Query: 236 DFPDSGAAYIHRI 248
D P S AY+HRI
Sbjct: 454 DVPQSAQAYVHRI 466
>gi|349578061|dbj|GAA23227.1| K7_Rok1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 564
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F++G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKSGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>gi|405975314|gb|EKC39888.1| Putative ATP-dependent RNA helicase DDX52 [Crassostrea gigas]
Length = 563
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 172/252 (68%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK--ID 58
LA Q RE +L++G + + K K+ D+L+STP RL ++ I+
Sbjct: 214 LAKQIYREFLRLSEGVGLKAHYISKSTTEKRLEKKY--DVLVSTPNRLVYMLQEDPPLIN 271
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+VE+LV+DE+DKLFE G + V +AC++ ++ R++FSAT VEE + +
Sbjct: 272 LSQVEWLVIDESDKLFEDGKTGFRDQLAKVYQACNSNNVKRAMFSATFAVEVEEWCKLNL 331
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ ++V +G KN+A+ +I+Q+L F G+E GKLLA+R A+ + PPVLIFVQSKERA+EL
Sbjct: 332 DNVLQVYIGAKNSATTTIEQELKFVGTESGKLLAVRDIIAKGVQPPVLIFVQSKERAREL 391
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +DG+ VIHSD +Q QR+NAV +FR+GKTW+LI T+++ RGMDF GVN VINYD
Sbjct: 392 FHELIYDGMNVDVIHSDQTQEQRDNAVKNFRSGKTWILICTELMGRGMDFIGVNLVINYD 451
Query: 237 FPDSGAAYIHRI 248
FP+S +YIHRI
Sbjct: 452 FPNSAISYIHRI 463
>gi|426237078|ref|XP_004012488.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Ovis aries]
Length = 598
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE KL++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|301779033|ref|XP_002924934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ailuropoda melanoleuca]
Length = 598
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSQKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A+E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVITVSIGARNSAAETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|256985213|ref|NP_084372.2| probable ATP-dependent RNA helicase DDX52 [Mus musculus]
gi|341940434|sp|Q8K301.2|DDX52_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
gi|74225794|dbj|BAE21716.1| unnamed protein product [Mus musculus]
gi|148683781|gb|EDL15728.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|26348749|dbj|BAC38014.1| unnamed protein product [Mus musculus]
Length = 579
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|160358657|sp|A6ZU15.1|ROK1_YEAS7 RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|151943643|gb|EDN61953.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407114|gb|EDV10381.1| ATP-dependent RNA helicase ROK1 [Saccharomyces cerevisiae RM11-1a]
gi|256272243|gb|EEU07234.1| Rok1p [Saccharomyces cerevisiae JAY291]
gi|259146339|emb|CAY79596.1| Rok1p [Saccharomyces cerevisiae EC1118]
gi|323348686|gb|EGA82928.1| Rok1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765777|gb|EHN07283.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 564
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>gi|432113623|gb|ELK35905.1| Putative ATP-dependent RNA helicase DDX52 [Myotis davidii]
Length = 581
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE K+++G F+I ++ K + + S DIL++TP RL ++R
Sbjct: 246 LASQTHRELVKISEGMGFRIHMIHKAAIAAKKFGSKSSKKFDILVTTPNRLIYLLKRDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELIKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHADRTQEQRDNTVQSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|6321267|ref|NP_011344.1| RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|1173121|sp|P45818.1|ROK1_YEAST RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|607182|emb|CAA84384.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
gi|971382|emb|CAA59758.1| putative ATP dependent RNA helicase [Saccharomyces cerevisiae]
gi|1322774|emb|CAA96883.1| ROK1 [Saccharomyces cerevisiae]
gi|285812042|tpg|DAA07942.1| TPA: RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|392299579|gb|EIW10673.1| Rok1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 564
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>gi|74177868|dbj|BAE39019.1| unnamed protein product [Mus musculus]
Length = 595
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|323309141|gb|EGA62368.1| Rok1p [Saccharomyces cerevisiae FostersO]
Length = 496
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSHKIFLEKKXPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>gi|20809366|gb|AAH29094.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|345330125|ref|XP_003431468.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ornithorhynchus anatinus]
Length = 840
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + S DIL++TP RL + ++
Sbjct: 482 LASQIHRELVKISEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLNQEPP 541
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+RVE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 542 GIDLTRVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSPKVRRAMFSATFAHDVEQWCK 601
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A+E+++Q+L+F GSE GKLLA+R + +PPVL+FVQS ERA
Sbjct: 602 LNLDNIISVSIGARNSAAETVEQELLFVGSETGKLLAMRDLVKKGFSPPVLVFVQSIERA 661
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 662 KELFHELIYEGINVDVIHAERTQQQRDNTVQSFRAGKIWVLICTALLARGIDFKGVNLVI 721
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 722 NYDFPTSAVEYIHRI 736
>gi|335298081|ref|XP_003358192.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sus scrofa]
Length = 599
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|383855221|ref|XP_003703115.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Megachile rotundata]
Length = 589
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC +L++G F++ ++ K L S DILI+TP R+ + +
Sbjct: 219 LAKQTYRECLRLSEGYDFRVHIISKINQALTAYGPKSSQKFDILITTPRRIIFLLSQDPP 278
Query: 57 -IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I VE+L++DEADKLFE G ++ + KAC+N ++ R++FSAT V + R
Sbjct: 279 AISFKNVEWLIVDEADKLFEDGTRCFRDQMETISKACTNENLRRAMFSATNTPVVTKWCR 338
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V + VG +N A++S++Q+L+F G E GKL+ALR + + PPVL+FVQSKERA
Sbjct: 339 HNLKGLVTITVGHRNAATDSVEQELLFVGEEGGKLVALRNIIQKGVLPPVLVFVQSKERA 398
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI VIH+D +QTQR+N V FR GK WVLI T+++ARG+DFKGVN VI
Sbjct: 399 QELFNELIYDGINVDVIHADRTQTQRDNVVRCFREGKIWVLICTELMARGIDFKGVNLVI 458
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +Y+HRI
Sbjct: 459 NYDFPPSVISYVHRI 473
>gi|73966874|ref|XP_852958.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Canis lupus
familiaris]
Length = 598
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|296201956|ref|XP_002748362.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Callithrix
jacchus]
Length = 575
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K +V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELVKISEGTGFRIHMIHKAVVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|332020434|gb|EGI60854.1| Putative ATP-dependent RNA helicase DDX52 [Acromyrmex echinatior]
Length = 558
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 166/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC KL+ G F+I ++ K L + S DILI+TP RL + +
Sbjct: 213 LAKQTYRECLKLSDGCDFRIHIISKVNQALTKYGPSSSQKFDILITTPKRLVFLLNQDPP 272
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L+ VE+L++DEADKLFE G + ++ + KAC + ++ S+FSAT V + R
Sbjct: 273 AISLNNVEWLIVDEADKLFEEGIRGFREQLEEITKACVSTNLRCSMFSATNTPAVSKWCR 332
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M + V VG++N A++ + QKL+F GSE GKL+ R + ++PPVL+FVQSKERA
Sbjct: 333 RNMKGLITVTVGQRNAAADLVDQKLLFVGSERGKLVEFRNIIQKGISPPVLVFVQSKERA 392
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI VIH+D + TQR+N V FR GK WVLI T+++ RG+DFKGVN VI
Sbjct: 393 QELFNELIYDGINVDVIHADRTMTQRDNTVRCFREGKIWVLICTELMGRGIDFKGVNLVI 452
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 453 NYDFPPSAISYIHRI 467
>gi|349603916|gb|AEP99614.1| putative ATP-dependent RNA helicase DDX52-like protein, partial
[Equus caballus]
Length = 512
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 159 LASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 218
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 219 GIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 278
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 279 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 338
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++G+ VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 339 KELFRELIYEGVNVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 398
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 399 NYDFPTSSVEYIHRI 413
>gi|344302192|gb|EGW32497.1| ATP-dependent RNA helicase ROK1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 546
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 167/254 (65%), Gaps = 7/254 (2%)
Query: 1 LATQTTRECKKLAKG--NKFQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRK 55
LA Q + + + KG + ++ K+L + ++ DI+++TPLRL + +
Sbjct: 198 LAHQIFNQLEAITKGYSKRLNCAILSKQLANKLNNKIINSSKYDIIVTTPLRLIDIVHNQ 257
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
IDLS+V L++DEADKLF+ G + D ++ C+ P I +S+FSAT+P VEE+A SI
Sbjct: 258 AIDLSKVSNLIIDEADKLFDHG-FAEQTDEILTHCTFPHIQKSMFSATIPSGVEEMAHSI 316
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAK 174
M D +RVI+G K A+ +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 317 MKDPIRVIIGHKEAANVTIDQKLVFTGNEQGKLLAIRQMIQQGQFKPPIIIFLQSITRAK 376
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE ++ F++G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 377 ALFHELLYDRLNVDVIHAERTPKQREEVINRFKSGDIWVLITTDVLARGVDFKGVNMVIN 436
Query: 235 YDFPDSGAAYIHRI 248
YD P + AY+HRI
Sbjct: 437 YDVPQTAQAYVHRI 450
>gi|355683377|gb|AER97087.1| DEAD box polypeptide 52 [Mustela putorius furo]
Length = 598
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|403215476|emb|CCK69975.1| hypothetical protein KNAG_0D02250 [Kazachstania naganishii CBS
8797]
Length = 560
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 173/258 (67%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K ++ L+ K L +++ +S D++ISTPLRL
Sbjct: 203 LANQIFIECTKLSHKIFHGKKKPLRVALLSKSLGAKLKNKVVSDKKYDVIISTPLRLIDV 262
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLSRV++L+ DEADKLF+ ++ D ++ +C++PS+ +++FSAT+P VEE+
Sbjct: 263 VKNEALDLSRVKHLIFDEADKLFD-KTFVEQTDDILSSCTDPSLRKAMFSATIPSGVEEI 321
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A +IM D VRVI+G K A+ SI+QKLV+ G+EEGKL+A+RQ E P++IF++S
Sbjct: 322 AHTIMMDPVRVIIGHKEAANSSIEQKLVYCGNEEGKLIAIRQMVQEGEFKAPIIIFLESI 381
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D + VIH++ + QR ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 382 TRAKALYHELMYDRMNVDVIHAERTPVQRTKIIERFKSGDLWCLICTDVLARGIDFKGVN 441
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P + AY+HRI
Sbjct: 442 LVINYDVPRTAQAYVHRI 459
>gi|195128419|ref|XP_002008661.1| GI13618 [Drosophila mojavensis]
gi|193920270|gb|EDW19137.1| GI13618 [Drosophila mojavensis]
Length = 595
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L KG + + K + + C DILISTP R+R ++++
Sbjct: 207 LAQQIYRECGELTKGTGLRTHFISK-VSEAKQQYGPECKQKYDILISTPNRVRFLLQQQP 265
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+D +E+LVLDEAD+L E G N + +D + AC+NP + FSAT V + A
Sbjct: 266 PLLDFKSIEWLVLDEADRLMEEGQNNFKEQLDDIYAACTNPQKRVAFFSATYTVPVAKWA 325
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VRV +G +N+A++++KQ+L+F GSE GKLLA+R+ + L PPVL+FVQSKER
Sbjct: 326 LRHLKNLVRVTIGVQNSATDTVKQELLFVGSESGKLLAVREMVRQGLQPPVLVFVQSKER 385
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ +Q QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 386 AKQLFEELLYDGINVDVIHAERTQHQRDNCVRAFREGHIWVLICTELMGRGIDFKGVNLV 445
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP S +YIHRI
Sbjct: 446 INYDFPPSKISYIHRI 461
>gi|395748896|ref|XP_003778849.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Pongo abelii]
Length = 491
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 138 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 197
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 198 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 257
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 258 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 317
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 318 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 377
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 378 NYDFPTSSVEYIHRI 392
>gi|297700670|ref|XP_002827359.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Pongo abelii]
Length = 600
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>gi|45768538|gb|AAH67608.1| Ddx52 protein [Danio rerio]
Length = 501
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/257 (47%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVR---STDLSKFSCDILISTPLRLRLAIRR- 54
LATQT RE KL++G F++ ++ K E V+ KF DIL++TP RL + +
Sbjct: 143 LATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKF--DILVTTPNRLIYLLNQD 200
Query: 55 -KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
I+LS VE+LV+DE+DKLFE G + + + ACS+P++ R LFSAT VE
Sbjct: 201 PPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERW 260
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+ + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R + PPVL+FVQS +
Sbjct: 261 CKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVLVFVQSID 320
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RA+ELY EL ++GI VIH+D +Q QR+N V FR+GK WVLI T ++ARG+DFKG+N
Sbjct: 321 RARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINL 380
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S YIHRI
Sbjct: 381 VINYDFPTSAVEYIHRI 397
>gi|62087456|dbj|BAD92175.1| ATP-dependent RNA helicase ROK1 isoform a variant [Homo sapiens]
Length = 512
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|397494236|ref|XP_003817990.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1 [Pan
paniscus]
Length = 413
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 60 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 119
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 120 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 179
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 180 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 239
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 240 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 299
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 300 NYDFPTSSVEYIHRI 314
>gi|397494238|ref|XP_003817991.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
paniscus]
gi|410051505|ref|XP_003953105.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Pan
troglodytes]
Length = 491
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 138 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 197
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 198 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 257
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 258 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 317
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 318 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 377
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 378 NYDFPTSSVEYIHRI 392
>gi|149724020|ref|XP_001503919.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Equus
caballus]
Length = 597
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 244 LASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 304 GIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 364 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++G+ VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFRELIYEGVNVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>gi|307198933|gb|EFN79685.1| Probable ATP-dependent RNA helicase DDX52 [Harpegnathos saltator]
Length = 452
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKE---LVRSTDLSKFSCDILISTPLRLRLAIRR--K 55
LA QT REC L+ G F+I ++ K L + S DILI+TP RL + +
Sbjct: 107 LAKQTYRECLSLSDGYDFRIHIINKTNQALTKYGPSSSQKFDILITTPKRLVFLLNQDPP 166
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I L VE+L++DEADKLFE G + +D + KAC+N ++ +FSAT V + R
Sbjct: 167 AISLKNVEWLIVDEADKLFEDGIRGFRQQLDEITKACTNDNLHCGMFSATNTPVVTKWCR 226
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M V V VG++N A++ ++Q+LVF GSE+GKL+ LR + + PPVLIFVQSKERA
Sbjct: 227 RNMKRLVTVTVGQRNAATDLVEQELVFVGSEKGKLMELRNMIRKGVAPPVLIFVQSKERA 286
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DG+ VIH+D + TQR+N V FR GK W+LI T+++ RG+DF GVN V+
Sbjct: 287 QELFNELIYDGVYVDVIHADRTVTQRDNTVRCFREGKIWMLICTELMGRGIDFIGVNLVV 346
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 347 NYDFPSSAISYIHRI 361
>gi|332258725|ref|XP_003278445.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Nomascus
leucogenys]
Length = 598
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|237840157|ref|XP_002369376.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967040|gb|EEB02236.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221483063|gb|EEE21387.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221503995|gb|EEE29672.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 652
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 165/251 (65%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT RE LA F+ +L+ +K+ V D +++TPLRL +R ++
Sbjct: 303 LAKQTQREFDSLAGARGFRCRLLDEQKQSVDQAASQAKRVDAVVTTPLRLVQFLRDGRVS 362
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L++ ++VLDEADKL ++G L D ++ C+ PS+ SLFSATLP V LA S++H+
Sbjct: 363 LAQCRHIVLDEADKLLDLGQL----DEILAGCTFPSLQVSLFSATLPPDVLRLADSLLHN 418
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-SFAESLNPPVLIFVQSKERAKELY 177
V + +G N A+ SI+Q+L+F +EEGKLLALR PPVLIFVQSKERAK+LY
Sbjct: 419 PVHISIGSPNAAATSIEQELLFCTNEEGKLLALRTLHLTGKFVPPVLIFVQSKERAKQLY 478
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +DGI IH+D ++ QR++ V+ FR G+ WVLI TDV+ARG+DFK V VINYDF
Sbjct: 479 CELVYDGIFVECIHADKTKKQRDDTVEAFRRGQIWVLICTDVMARGVDFKNVELVINYDF 538
Query: 238 PDSGAAYIHRI 248
P S A YIHRI
Sbjct: 539 PQSAAVYIHRI 549
>gi|193785511|dbj|BAG50877.1| unnamed protein product [Homo sapiens]
gi|193786536|dbj|BAG51319.1| unnamed protein product [Homo sapiens]
Length = 413
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 60 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 119
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 120 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 179
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 180 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 239
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 240 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 299
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 300 NYDFPTSSVEYIHRI 314
>gi|38569505|ref|NP_008941.2| probable ATP-dependent RNA helicase DDX52 [Homo sapiens]
gi|296439375|sp|Q9Y2R4.3|DDX52_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
Length = 599
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|332847931|ref|XP_001173155.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
troglodytes]
gi|410211834|gb|JAA03136.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410252896|gb|JAA14415.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410307108|gb|JAA32154.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410349923|gb|JAA41565.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
Length = 599
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|113195544|ref|NP_001037780.1| probable ATP-dependent RNA helicase DDX52 [Danio rerio]
gi|109150086|gb|AAI17611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Danio rerio]
gi|182892172|gb|AAI65190.1| Ddx52 protein [Danio rerio]
Length = 606
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/257 (47%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVR---STDLSKFSCDILISTPLRLRLAIRRK 55
LATQT RE KL++G F++ ++ K E V+ KF DIL++TP RL + +
Sbjct: 248 LATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKF--DILVTTPNRLIYLLNQD 305
Query: 56 K--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
I+LS VE+LV+DE+DKLFE G + + + ACS+P++ R LFSAT VE
Sbjct: 306 PPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERW 365
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+ + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R + PPVL+FVQS +
Sbjct: 366 CKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVLVFVQSID 425
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RA+ELY EL ++GI VIH+D +Q QR+N V FR+GK WVLI T ++ARG+DFKG+N
Sbjct: 426 RARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINL 485
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S YIHRI
Sbjct: 486 VINYDFPTSAVEYIHRI 502
>gi|207345469|gb|EDZ72284.1| YGL171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 335
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 164/239 (68%), Gaps = 5/239 (2%)
Query: 12 LAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLD 68
K Q+ L+ K L +++ +S DI+ISTPLRL ++ + +DLS+V++L+ D
Sbjct: 2 FGKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNEALDLSKVKHLIFD 61
Query: 69 EADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN 128
EADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+A+SIM D VRVI+G K
Sbjct: 62 EADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQSIMMDPVRVIIGHKE 120
Query: 129 TASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRA 187
A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S RAK LY EL +D I
Sbjct: 121 AANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESITRAKALYHELMYDRINV 180
Query: 188 GVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN VINYD P S AY+H
Sbjct: 181 DVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVH 239
>gi|410980532|ref|XP_003996631.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Felis catus]
Length = 597
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 244 LANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 304 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 364 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>gi|119578005|gb|EAW57601.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_c [Homo
sapiens]
Length = 491
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 138 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 197
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 198 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 257
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 258 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 317
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 318 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 377
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 378 NYDFPTSSVEYIHRI 392
>gi|81294184|gb|AAI08030.1| Ddx52 protein [Danio rerio]
Length = 588
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/257 (47%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVR---STDLSKFSCDILISTPLRLRLAIRRK 55
LATQT RE KL++G F++ ++ K E V+ KF DIL++TP RL + +
Sbjct: 248 LATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKF--DILVTTPNRLIYLLNQD 305
Query: 56 K--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
I+LS VE+LV+DE+DKLFE G + + + ACS+P++ R LFSAT VE
Sbjct: 306 PPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERW 365
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+ + + V V +G +N+A+E+++Q+L+F GSE GK+LA+R + PPVL+FVQS +
Sbjct: 366 CKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVLVFVQSID 425
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RA+ELY EL ++GI VIH+D +Q QR+N V FR+GK WVLI T ++ARG+DFKG+N
Sbjct: 426 RARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINL 485
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S YIHRI
Sbjct: 486 VINYDFPTSAVEYIHRI 502
>gi|7023040|dbj|BAA91812.1| unnamed protein product [Homo sapiens]
Length = 491
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 138 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 197
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 198 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 257
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 258 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 317
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 318 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 377
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 378 NYDFPTSSVEYIHRI 392
>gi|431890891|gb|ELK01770.1| Putative ATP-dependent RNA helicase DDX52 [Pteropus alecto]
Length = 598
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 245 LASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 304
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 305 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 365 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELIKKGFTPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|354497111|ref|XP_003510665.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 2
[Cricetulus griseus]
Length = 601
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 248 LASQIHRELIKISEGTGFRIHMIHKAAIAAKRFGPKSSKKFDILVTTPNRLIYLLKQDPP 307
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 308 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 367
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 368 LNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKVFNPPVLVFVQSIERA 427
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 428 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 487
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 488 NYDFPTSSVEYIHRI 502
>gi|213402959|ref|XP_002172252.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
gi|212000299|gb|EEB05959.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
Length = 519
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 169/253 (66%), Gaps = 8/253 (3%)
Query: 1 LATQTTRECKKLAKGNK----FQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA Q R+ K+L F K +K ++T L + DI +STP+RL AI+
Sbjct: 158 LAEQVNRQLKRLIARTDLKAIFYDKSNEKIQEKNTKLREIY-DICVSTPMRLVHAIK-SG 215
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+ L+ VE+LVLDEAD+LFE N ++ D V+ AC++P I + LFSATLP VEELA+++
Sbjct: 216 LSLANVEFLVLDEADRLFE-KNFVEQTDGVLSACTHPRICKCLFSATLPSTVEELAKTVA 274
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
HD +R+IVG+K+ A+ +I+QKL+F G+E KL+ RQ ++ + P V+IFVQ +RAK
Sbjct: 275 HDPLRIIVGQKDAATSTIEQKLLFVGNEASKLVIFRQMVSDGEIQPRVVIFVQDIDRAKA 334
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
LY EL FDGI IH +L Q +R+ + FR G+ WVLIATD++ARG+DF GV VINY
Sbjct: 335 LYTELMFDGIHVAAIHGELPQMKRDEVMARFRKGEVWVLIATDLLARGIDFNGVKLVINY 394
Query: 236 DFPDSGAAYIHRI 248
DFP S +YIHRI
Sbjct: 395 DFPQSVHSYIHRI 407
>gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Monodelphis domestica]
Length = 608
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE +L++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 254 LASQTHRELVRLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 313
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 314 GIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCK 373
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V +G +N+A+E+++Q+L+F GSE GKLLA+R + +PPVL+FVQS ERA
Sbjct: 374 LNLDSVISVSIGARNSAAETVEQELLFVGSETGKLLAIRDLIKKGFHPPVLVFVQSIERA 433
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 434 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 493
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 494 NYDFPTSAVEYIHRI 508
>gi|354497109|ref|XP_003510664.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 1
[Cricetulus griseus]
Length = 599
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 248 LASQIHRELIKISEGTGFRIHMIHKAAIAAKRFGPKSSKKFDILVTTPNRLIYLLKQDPP 307
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 308 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 367
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 368 LNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKVFNPPVLVFVQSIERA 427
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 428 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 487
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 488 NYDFPTSSVEYIHRI 502
>gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Monodelphis domestica]
Length = 604
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE +L++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 250 LASQTHRELVRLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 309
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 310 GIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCK 369
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V +G +N+A+E+++Q+L+F GSE GKLLA+R + +PPVL+FVQS ERA
Sbjct: 370 LNLDSVISVSIGARNSAAETVEQELLFVGSETGKLLAIRDLIKKGFHPPVLVFVQSIERA 429
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 430 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 489
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 490 NYDFPTSAVEYIHRI 504
>gi|27697141|gb|AAH41785.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Homo sapiens]
gi|119578004|gb|EAW57600.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_b [Homo
sapiens]
Length = 599
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|355568613|gb|EHH24894.1| Putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|355754079|gb|EHH58044.1| Putative ATP-dependent RNA helicase DDX52 [Macaca fascicularis]
Length = 599
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAG+ WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGRIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|380788803|gb|AFE66277.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|383415417|gb|AFH30922.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
Length = 599
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAG+ WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGRIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|366990303|ref|XP_003674919.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
gi|342300783|emb|CCC68547.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
Length = 563
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ ++ D++I+TPLRL
Sbjct: 207 LANQIFLECVKLSNRIYLDKKRPLQVALLSKSLSAKLKNKVINDKKYDLIITTPLRLIDL 266
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ +C++P + +++FSAT+P VEE+
Sbjct: 267 VKSEALDLSKVKHLIFDEADKLFD-KTFVEQADDILNSCTDPVLRKAMFSATIPSNVEEI 325
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ ES PP++IF++S
Sbjct: 326 ANSIMLDPVRVIIGHKEAANANIEQKLVFCGNEEGKLIAIRQLVQESEFKPPIIIFLESI 385
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D + VIH++ + QRE ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 386 TRAKALYHELMYDRMNVDVIHAERTPMQREKIIERFKSGDLWCLICTDVLARGIDFKGVN 445
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 446 LVINYDVPRTAQAYVH 461
>gi|395531966|ref|XP_003768044.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sarcophilus
harrisii]
Length = 618
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE ++++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 255 LASQTHRELVRISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 314
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 315 GIDLKNVEWLVVDESDKLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCK 374
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + + +G +N+A+E+++Q+L+F GSE GKLLA+R + +PPVL+FVQS ERA
Sbjct: 375 LNLDNVISISIGARNSAAETVEQELLFVGSETGKLLAMRDLIKKGFHPPVLVFVQSIERA 434
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 435 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 494
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 495 NYDFPTSAVEYIHRI 509
>gi|365983372|ref|XP_003668519.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
gi|343767286|emb|CCD23276.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
Length = 571
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K QI L+ K L +++ +++ DI+ISTPLRL
Sbjct: 217 LANQIFIECIKLSNKIFLDKKRPLQIALLSKSLSAKLKNKVINEKKYDIIISTPLRLIDV 276
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ +C++ S+ +++FSAT+P VEE+
Sbjct: 277 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQTDDILSSCTDNSLRKAMFSATIPSNVEEI 335
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSK 170
A SIM D +RVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E PP++IF++S
Sbjct: 336 ANSIMLDPIRVIIGHKEAANMNIEQKLVFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 395
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D + VIH++ + QRE ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 396 TRAKALYHELMYDRMNVDVIHAERTALQREKIIERFKSGDLWCLICTDVLARGIDFKGVN 455
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 456 LVINYDVPRTAQAYVH 471
>gi|194748100|ref|XP_001956487.1| GF25239 [Drosophila ananassae]
gi|190623769|gb|EDV39293.1| GF25239 [Drosophila ananassae]
Length = 535
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 193 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGTECKQRYDILVSTPNRVRFLLQQQP 251
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS+VE+ VLDEAD+L E G N + +D + ACSNP + FSAT V + A
Sbjct: 252 PLLDLSQVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPGKCVAFFSATYTVPVAKWA 311
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VRV +G +NTA++S++Q+L+F GSE GKL+A+R + L PPVL+FVQSK+R
Sbjct: 312 LRHLKNLVRVTIGIQNTATDSVQQELLFVGSESGKLVAVRDLVRQGLQPPVLVFVQSKDR 371
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 372 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGSIWVLICTELMGRGIDFKGVNLV 431
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 432 INYDFPPTTISYIHRI 447
>gi|344285314|ref|XP_003414407.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Loxodonta africana]
Length = 529
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 184 LASQIHRELLKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 243
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 244 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 303
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + +PPVL+FVQS ERA
Sbjct: 304 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFSPPVLVFVQSIERA 363
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 364 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 423
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 424 NYDFPTSSVEYIHRI 438
>gi|209418026|gb|ACI46551.1| RE58551p [Drosophila melanogaster]
Length = 609
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 215 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 273
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACSNP+ + FSAT V + A
Sbjct: 274 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWA 333
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 334 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKER 393
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 394 AKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLV 453
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 454 INYDFPPTTISYIHRI 469
>gi|326931593|ref|XP_003211912.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Meleagris gallopavo]
Length = 814
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRR--K 55
LA+QT RE KLA+G F+I +++K + S DIL++TP RL +++
Sbjct: 451 LASQTHRELVKLAEGTGFRIHMIQKASEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 510
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++ + R+ FSAT VEE +
Sbjct: 511 AIDLTSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSHVVRRAFFSATFARDVEEWCK 570
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V V VG +N+A+E+++Q+L+F GSE GKL A+R+ + PPVL+FVQS ERA
Sbjct: 571 LNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA 630
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 631 KELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVI 690
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S YIHRI
Sbjct: 691 NYDLPTSAVEYIHRI 705
>gi|403274723|ref|XP_003929113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 244 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ R
Sbjct: 304 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCR 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + +PPVL+FVQS ERA
Sbjct: 364 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFSPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFHELIYEGINVDVIHAERTQQQRDNTVYSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>gi|383792218|gb|AFH41849.1| FI20004p1 [Drosophila melanogaster]
Length = 609
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 215 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 273
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACSNP+ + FSAT V + A
Sbjct: 274 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWA 333
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 334 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKER 393
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 394 AKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLV 453
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 454 INYDFPPTTISYIHRI 469
>gi|198426131|ref|XP_002127349.1| PREDICTED: similar to Ddx52 protein [Ciona intestinalis]
Length = 538
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 165/268 (61%), Gaps = 20/268 (7%)
Query: 1 LATQTTRECKKLAKGNK-----------FQIKLMKKELVRS-TDLSKFSCDI--LISTPL 46
LA QT ECKKL + I+LM K LV+S T+ K +CDI LISTP
Sbjct: 177 LAEQTFSECKKLIRSENDEENEKIHKDLLNIRLMDKNLVKSFTEKKKQTCDIDLLISTPN 236
Query: 47 RLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG----NLLKHIDPVVKACSNPSIVRSLF 100
R+ I+++ + L +E+LV+DE+DKLFE G + + + AC NP I R++F
Sbjct: 237 RIIHLIKQETPILKLDSIEWLVVDESDKLFEDGKEDASFRDQLGRIYSACENPKIRRAMF 296
Query: 101 SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN 160
SAT V++ M + ++V VG KNTA+ S+KQ+L + G+E+GKLLA++
Sbjct: 297 SATFAHDVQQWCVLNMDNVLQVTVGGKNTATSSVKQELKYVGNEQGKLLAMQDIIRGGFA 356
Query: 161 PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVI 220
PP L+FVQSKERAKELY EL +DGI IH D + QRE A+ AG TWV+I T+ +
Sbjct: 357 PPALVFVQSKERAKELYAELVYDGINIDAIHGDRTPEQREKAIQSLHAGTTWVMICTEHM 416
Query: 221 ARGMDFKGVNCVINYDFPDSGAAYIHRI 248
RGMDF+ VN V+NYDFP+S YIHRI
Sbjct: 417 GRGMDFQNVNLVVNYDFPNSAVTYIHRI 444
>gi|367000868|ref|XP_003685169.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
gi|357523467|emb|CCE62735.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
Length = 570
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/258 (46%), Positives = 171/258 (66%), Gaps = 11/258 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLA 51
LA Q EC KLA K QI L+ K L +S DI+ISTPLRL
Sbjct: 206 LADQIFLECTKLANRLYLDKKRPLQIALLSKSLSSKLKNKVISDKKYDIIISTPLRLIDV 265
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++L+ DEADKLF+ ++ D ++ +CS+PS+ +++FSAT+P VEE+
Sbjct: 266 VKNEALDLSTVKHLIFDEADKLFD-KTFVEQTDDILNSCSDPSLRKAMFSATIPSNVEEI 324
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSK 170
A++IM D +RVI+G K A+ +I+QKL+F G+EEGKL+A++Q + PPV+IF++S
Sbjct: 325 AQTIMMDPIRVIIGHKEAANANIEQKLIFCGNEEGKLIAIKQLVQQGEFRPPVIIFLESI 384
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D + VIH++ + QR ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 385 TRAKALYHELMYDNLNVDVIHAERTPIQRNKIIEKFKTGELWCLITTDVLARGIDFKGVN 444
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P + AY+HRI
Sbjct: 445 LVINYDVPRTAQAYVHRI 462
>gi|24666101|ref|NP_649009.1| CG5589 [Drosophila melanogaster]
gi|7293941|gb|AAF49303.1| CG5589 [Drosophila melanogaster]
Length = 594
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 200 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 258
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACSNP+ + FSAT V + A
Sbjct: 259 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWA 318
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 319 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKER 378
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 379 AKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLV 438
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 439 INYDFPPTTISYIHRI 454
>gi|348567701|ref|XP_003469637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Cavia
porcellus]
Length = 594
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + S DIL++TP RL +++
Sbjct: 241 LASQIHRELIKISEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 300
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ R
Sbjct: 301 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHQVRRAMFSATFAYDVEQWCR 360
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E++ Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 361 LNLDNVITVSIGARNSAVETVDQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 420
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 421 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 480
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 481 NYDFPTSSVEYIHRI 495
>gi|402899925|ref|XP_003912934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Papio anubis]
Length = 599
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDSVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAG+ WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGRIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|47227152|emb|CAG00514.1| unnamed protein product [Tetraodon nigroviridis]
Length = 649
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS---CDILISTPLRLRLAIRRKK- 56
LA+QT RE +L G F++ ++ K + + S DILISTP RL +++
Sbjct: 259 LASQTYRELLRLTDGAGFRVHIIDKASLAAKKYGPHSNKKYDILISTPNRLIFLLKQDPP 318
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+DLS VE+LV+DE+DKLFE G + + + ACS + R+ FSAT VE+ R
Sbjct: 319 ALDLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSGSKVRRAFFSATCTSDVEQWCR 378
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +NTA E+++Q+L+F G+E GKLLA+R+ + PP+L+FVQSKERA
Sbjct: 379 LNLDNLVSVNIGPRNTAVETVEQELLFVGTENGKLLAVREIIKKGFLPPMLVFVQSKERA 438
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL ++GI VIH++ +Q QR+N V+ FR+GK WVLI T ++ARG+DFKGVN V+
Sbjct: 439 RELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVL 498
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 499 NYDFPTSAVEYIHRI 513
>gi|291405635|ref|XP_002719293.1| PREDICTED: ATP-dependent RNA helicase ROK1 [Oryctolagus cuniculus]
Length = 599
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|340715568|ref|XP_003396283.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
terrestris]
Length = 582
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 171/258 (66%), Gaps = 13/258 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC------DILISTPLRLRLAIRR 54
LA QT REC +L++G F++ ++ K + L+K+ DILI+TP R+ + +
Sbjct: 215 LAKQTYRECLRLSEGYNFRVHIISKV---NQALNKYGLKSSQKFDILITTPKRIIYLLNQ 271
Query: 55 KK--IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
I S VE+L++DE DKLFE G ++ + K+C+N ++ +++FSAT V +
Sbjct: 272 DPPAISFSNVEWLIVDEVDKLFEDGTRCFRDQLETISKSCTNENLHKAMFSATNTPIVTK 331
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
R + + V VG +N A++ ++Q+L+F G+E GKL+ALR + + PPVL+FVQSK
Sbjct: 332 WCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNIIQKGVLPPVLVFVQSK 391
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
ERA+EL+ EL +DG+ VIH+D +QTQR+N V FR GK WVLI T+++ARG+DFKGVN
Sbjct: 392 ERAQELFNELIYDGVNVDVIHADRTQTQRDNVVRCFREGKIWVLICTELMARGIDFKGVN 451
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYDFP S +Y+HRI
Sbjct: 452 LVINYDFPPSAISYVHRI 469
>gi|350418051|ref|XP_003491710.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
impatiens]
Length = 563
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 171/258 (66%), Gaps = 13/258 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC------DILISTPLRLRLAIRR 54
LA QT REC +L++G F++ ++ K + L+K+ DILI+TP R+ + +
Sbjct: 215 LAKQTYRECLRLSEGCNFRVHIISKV---NQALNKYGLKSSQKFDILITTPKRIIYLLNQ 271
Query: 55 KK--IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
I S VE+L++DE DKLFE G ++ + K+C+N ++ +++FSAT V +
Sbjct: 272 DPPAISFSNVEWLIVDEVDKLFEDGTRCFRDQLEAISKSCTNENLHKAMFSATNTPIVTK 331
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
R + + V VG +N A++ ++Q+L+F G+E GKL+ALR + + PPVL+FVQSK
Sbjct: 332 WCRRNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNIIQKGVLPPVLVFVQSK 391
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
ERA+EL+ EL +DG+ VIH+D +QTQR+N V FR GK WVLI T+++ARG+DFKGVN
Sbjct: 392 ERAQELFNELIYDGVNVDVIHADRTQTQRDNVVRCFREGKIWVLICTELMARGIDFKGVN 451
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYDFP S +Y+HRI
Sbjct: 452 LVINYDFPPSAISYVHRI 469
>gi|440804141|gb|ELR25019.1| DEAD/DEAH box helicase [Acanthamoeba castellanii str. Neff]
Length = 643
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 169/249 (67%), Gaps = 13/249 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS-CDILISTPLRLRLAIRRKKIDL 59
LA Q RE +KL+KG +F+I ++ K S + DIL++TP+RL +R + + L
Sbjct: 299 LAQQIYRELRKLSKGKEFRICVLTKANANENSFSSTTRFDILVTTPMRLVHLLRTESLKL 358
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
V++LVLDEADKL ++G ++ +D ++ AC+N ++ RSL+SAT+ VE+LAR+ + D
Sbjct: 359 DSVQHLVLDEADKLLDMG-FMEQVDEIIAACTNQAVQRSLWSATMSPIVEDLARTFLRDP 417
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGE 179
V + +G ++ A+ +IKQ+L F G EEGKLL LRQ + QSK+RAKEL+ E
Sbjct: 418 VHLTIGTRDAATTTIKQRLEFVGREEGKLLMLRQ-----------MITQSKDRAKELFRE 466
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
L ++ ++ VIHS+ +Q QR++ + +FR+G W+LI TD++ARG+DF+GV+ VINYDFP
Sbjct: 467 LIYENLKVDVIHSERTQAQRDSIIKNFRSGAIWILICTDLMARGIDFRGVSSVINYDFPQ 526
Query: 240 SGAAYIHRI 248
+ YIHRI
Sbjct: 527 TTQEYIHRI 535
>gi|348686378|gb|EGZ26193.1| hypothetical protein PHYSODRAFT_555670 [Phytophthora sojae]
Length = 698
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 162/248 (65%), Gaps = 17/248 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q E +LA G K I L+ K + I++ + ++A+ DLS
Sbjct: 338 LAVQIRSEFTRLAAGKKLHITLLSK-----------ATAATIASQTKSKMAV-----DLS 381
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
VE + LDEAD+L E+G ++ +D + AC++ + R++FSAT+ + VEELA++++ D V
Sbjct: 382 TVEMVCLDEADRLLELG-FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPV 440
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
+V VG KN + +I QKLVF G EEGKL+A++Q + L P L+FVQ+KERA ELY EL
Sbjct: 441 KVAVGTKNAGASTIDQKLVFVGKEEGKLVAMKQLLHDGLQLPALLFVQNKERANELYHEL 500
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+DG+ G +H+D ++ QR++ + FR G+ WVLI TD+++RGMDFK VN VINYDFP S
Sbjct: 501 LYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQS 560
Query: 241 GAAYIHRI 248
+YIHRI
Sbjct: 561 AVSYIHRI 568
>gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Saccoglossus kowalevskii]
Length = 681
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA QT RE +LA+G F+I ++ K + S DIL++TP RL + +
Sbjct: 250 LAQQTYREFCRLAEGRSFRIHIIDKTSQAAKKFGPQSSQKFDILVTTPNRLVYMLNQHPP 309
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
++L+ VE+L++DE+DKLFE G + + + KAC + + R++FSAT VE+ +
Sbjct: 310 ALNLTNVEWLIVDESDKLFEEGKQGFREQLALIYKACDSMQVRRAMFSATFAYDVEQWCK 369
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V +G++N A ++I+Q+L+F G E GKLLA+R + + PP+L+FVQSKERA
Sbjct: 370 LNLDNVASVTIGQRNAAVDTIEQELLFVGQEYGKLLAIRDIIRKGVQPPMLVFVQSKERA 429
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL +DGI VIH+D +QTQR+N V FRAGK W+LI T+++ RG+DFKGVN V+
Sbjct: 430 KELFLELIYDGINVDVIHADRTQTQRDNVVRSFRAGKIWILICTELMGRGIDFKGVNLVV 489
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 490 NYDFPSSAVSYIHRI 504
>gi|109114658|ref|XP_001112113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Macaca
mulatta]
Length = 599
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE++KLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESNKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAG+ WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGRIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>gi|385305034|gb|EIF49032.1| atp-dependent rna helicase rok1 [Dekkera bruxellensis AWRI1499]
Length = 574
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/258 (45%), Positives = 169/258 (65%), Gaps = 16/258 (6%)
Query: 1 LATQTTRECKKLAKG---------NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLA 51
LA Q E K+ G NK ++ ++++S SKF +I+++TPLRL
Sbjct: 208 LAYQIFSELSKIVNGVPGIKVAYLNKSLAAKLRNKVIQS---SKF--NIIVTTPLRLISL 262
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
+ IDLS + ++VLDEADK+FE N ++ D ++ AC+NP + RS+FSAT+ VEE+
Sbjct: 263 VEDDAIDLSHIHHIVLDEADKMFE-SNFVEQTDRILTACTNPHLRRSIFSATITSSVEEI 321
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+S+M R+IVG K A+ +I+QKLVF G E GKL+A+R + PPV+IF+QS
Sbjct: 322 AQSVMTYPERIIVGHKEAANTNIEQKLVFCGDEHGKLIAIRNMIQQGEFKPPVIIFLQSI 381
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK L+ EL +DG+ VIH++ +Q QRE ++ F+ G+ W LI TDV+ARG+DFKG+N
Sbjct: 382 PRAKALFHELIYDGLNVDVIHAERTQVQREKVLEKFKRGELWCLICTDVLARGIDFKGIN 441
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P+S AY+HRI
Sbjct: 442 MVINYDVPNSAQAYVHRI 459
>gi|351696669|gb|EHA99587.1| Putative ATP-dependent RNA helicase DDX52, partial [Heterocephalus
glaber]
Length = 442
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + S DIL++TP RL +++
Sbjct: 108 LASQIHRELIKISEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 167
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 168 GIDLTSVEWLIVDESDKLFEDGKTGFRDQLASIFLACTSYQVRRAMFSATFAYDVEQWCK 227
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPP+L+FVQS ERA
Sbjct: 228 LNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPLLVFVQSIERA 287
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V+ FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 288 KELFHELIYEGINVDVIHAERTQEQRDNTVNSFRAGKIWVLICTALLARGIDFKGVNLVI 347
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 348 NYDFPTSSVEYIHRI 362
>gi|449479900|ref|XP_002199492.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Taeniopygia
guttata]
Length = 615
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 166/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRR--K 55
LA+QT RE KLA+G F+I ++ K + S DIL++TP RL ++
Sbjct: 252 LASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKEDPP 311
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+LV+DE+DKLFE G + + + AC++ R+LFSAT VEE +
Sbjct: 312 AIDLSSVEWLVVDESDKLFEDGKSGFREQLGTIFLACTSHLARRALFSATFAHDVEEWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V VG +N+A+E+++Q+L+F GSE GKL A+R+ + PPVL+FVQS ERA
Sbjct: 372 LNLDNVVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+ V FRAGK WVLI + ++ARGMDFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHADKTQQQRDRVVQSFRAGKIWVLICSALLARGMDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S YIHRI
Sbjct: 492 NYDLPTSAVEYIHRI 506
>gi|390366612|ref|XP_003731077.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Strongylocentrotus purpuratus]
Length = 403
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 152/214 (71%), Gaps = 4/214 (1%)
Query: 39 DILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL +++ I L+ VE+L++DE+DKLFE G + + +AC +
Sbjct: 33 DILVTTPNRLVYLLQQDPPAIKLNHVEWLIIDESDKLFEEGKTGFRDQLGIIYQACDSSQ 92
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ R++FSAT VE+ R + + V V +G +NTA++ I+Q+L+F GSE GKLLA+R
Sbjct: 93 VRRAMFSATFAYDVEQWCRLNLDNVVTVSIGARNTANDRIEQELIFVGSESGKLLAVRNL 152
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
F++ PPVL+FVQSKERAKEL+ EL +DG VIH+D +QTQR+N V FRAGK WVL
Sbjct: 153 FSKGFTPPVLVFVQSKERAKELFQELIYDGYNVDVIHADKTQTQRDNIVKGFRAGKIWVL 212
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IAT+++ RG+DFKGVN VINYDFP S +YIHRI
Sbjct: 213 IATELMGRGIDFKGVNLVINYDFPTSAVSYIHRI 246
>gi|195591171|ref|XP_002085316.1| GD12376 [Drosophila simulans]
gi|194197325|gb|EDX10901.1| GD12376 [Drosophila simulans]
Length = 592
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 200 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 258
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACS+P+ + FSAT V + A
Sbjct: 259 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWA 318
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 319 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDLVRQGLQPPVLVFVQSKER 378
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 379 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGSIWVLICTELMGRGIDFKGVNLV 438
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 439 INYDFPPTTISYIHRI 454
>gi|71897029|ref|NP_001025896.1| probable ATP-dependent RNA helicase DDX52 [Gallus gallus]
gi|60098635|emb|CAH65148.1| hypothetical protein RCJMB04_4d17 [Gallus gallus]
Length = 603
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 166/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRR--K 55
LA+QT RE KLA G F+I +++K + S DIL++TP RL +++
Sbjct: 240 LASQTHRELVKLADGTGFRIHMIQKASEAAKKFGPKSSRKFDILVTTPNRLIYLLKQDPP 299
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R+ FSAT VEE +
Sbjct: 300 AIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCK 359
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ V V VG +N+A+E+++Q+L+F GSE GKL A+R+ + PPVL+FVQS ERA
Sbjct: 360 LNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA 419
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 420 KELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVI 479
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S YIHRI
Sbjct: 480 NYDLPTSAVEYIHRI 494
>gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta]
gi|190654683|gb|EDV51926.1| GG15782 [Drosophila erecta]
Length = 592
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 167/256 (65%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 199 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 257
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACS+P+ + FSAT V + A
Sbjct: 258 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWA 317
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 318 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDLVRQGLQPPVLVFVQSKER 377
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 378 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGSIWVLICTELMGRGIDFKGVNLV 437
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 438 INYDFPPTTISYIHRI 453
>gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba]
gi|194181068|gb|EDW94679.1| GE22119 [Drosophila yakuba]
Length = 594
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 166/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + K + + C DIL+STP R+R ++++
Sbjct: 201 LAQQIYRECAELTRQTGLSTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 259
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACS+P+ + FSAT V + A
Sbjct: 260 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWA 319
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 320 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDLVRQGLQPPVLVFVQSKER 379
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 380 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGSIWVLICTELMGRGIDFKGVNLV 439
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 440 INYDFPPTTISYIHRI 455
>gi|348518535|ref|XP_003446787.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Oreochromis niloticus]
Length = 616
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS---CDILISTPLRLRLAIRRKK- 56
LA+QT RE +L++G F++ ++ K + + S DIL+STP RL +++
Sbjct: 265 LASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPRSNKKYDILVSTPNRLIFLLKQDPP 324
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + + ACS P + R+ FSAT VE+ R
Sbjct: 325 AIDLSSVEWLIVDESDKLFEDGKTGFREQLATIFLACSGPKVRRAFFSATCTADVEQWCR 384
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +NTA +++ Q+L+F G+E GKL+A+R + PP+L+FVQ+ ERA
Sbjct: 385 LNLDNLVSVNIGHRNTAVDTVDQQLLFVGTENGKLVAMRDIIKKGFLPPMLVFVQTIERA 444
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL ++GI VIH+D +Q QR+N V+ FR+GK WVLI T ++ARG+DFKGVN V+
Sbjct: 445 RELFHELVYEGINVDVIHADRTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVL 504
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 505 NYDFPTSAVEYIHRI 519
>gi|328789292|ref|XP_001120427.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis mellifera]
Length = 512
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 167/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRR--K 55
LA QT REC +L++G F+I ++ K L + S DILI+TP R+ + +
Sbjct: 158 LAKQTYRECLRLSEGYNFKIHIISKINQALNKYGPKSSQKFDILITTPKRIIYLLNQDPP 217
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I + VE+L++DE DKLFE G + + K+C++ + +++FSAT V + R
Sbjct: 218 AISFNNVEWLIVDEVDKLFEDGIRCFRDQFEKISKSCTSEKLHKAMFSATNTPIVTKWCR 277
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V VG +N A++ ++Q+L+F G+E GKL+ALR + + PPVL+FVQSKERA
Sbjct: 278 RNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNIIQKGILPPVLVFVQSKERA 337
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI VIH+D +QTQR+N V FR GK WVLI T+++ARG+DFKG+N VI
Sbjct: 338 QELFNELIYDGINVDVIHADRTQTQRDNVVRCFREGKIWVLICTELMARGIDFKGINLVI 397
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 398 NYDFPSSAISYIHRI 412
>gi|344233769|gb|EGV65639.1| hypothetical protein CANTEDRAFT_129123 [Candida tenuis ATCC 10573]
Length = 556
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 171/254 (67%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-----RSTDLSKFSCDILISTPLRLRLAIRRK 55
LATQ + L++G ++ ++ K+L +S + K DIL++TPLRL I+ +
Sbjct: 203 LATQIFQNLDILSRGFNLKLGILSKQLANKLTEKSVNSDKH--DILVATPLRLIGLIKSE 260
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
I+LS+V+ LV+DEADKLFE G L+ D ++ + ++ ++ +++FSAT+P VEE+ ++I
Sbjct: 261 SINLSKVQNLVVDEADKLFEQG-FLQQTDTILASLNSKNVQKTMFSATIPSGVEEICQAI 319
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D +RVI+G K AS +I QKL+F G+EEGKLLA+RQ + P ++IF+QS RAK
Sbjct: 320 MIDPLRVIIGHKEAASNTIDQKLIFTGNEEGKLLAIRQLIQDGEFKPSIIIFLQSIIRAK 379
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 380 SLFHELLYDKLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVIN 439
Query: 235 YDFPDSGAAYIHRI 248
YD P S AY+HRI
Sbjct: 440 YDVPQSAQAYVHRI 453
>gi|195328469|ref|XP_002030937.1| GM24308 [Drosophila sechellia]
gi|194119880|gb|EDW41923.1| GM24308 [Drosophila sechellia]
Length = 592
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 166/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DIL+STP R+R ++++
Sbjct: 200 LAQQIYRECAELTRETGLRTHFISK-VSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEP 258
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACS+P+ S FSAT V + A
Sbjct: 259 PLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPTKCVSFFSATYTVPVAKWA 318
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+E+++Q+L+F GSE GKL+A+R + L PPVL+FVQSKER
Sbjct: 319 LRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAMRDLVRQGLQPPVLVFVQSKER 378
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ S QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 379 AKQLFEELLYDGINVDVIHAEKSHHQRDNCVRAFREGSIWVLICTELMGRGIDFKGVNLV 438
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 439 INYDFPPTTISYIHRI 454
>gi|260946563|ref|XP_002617579.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
gi|238849433|gb|EEQ38897.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
Length = 561
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 168/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKEL-VRSTD--LSKFSCDILISTPLRLRLAIRRKK 56
LA+Q + ++L +G K L+ ++L R +D +S +++STPLRL ++
Sbjct: 214 LASQIHVQLQQLTRGFKSVTSALLSRQLATRLSDKIVSGEKYSVIVSTPLRLLDMVQGGH 273
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS VE LV+DEAD++F+ G ++ D ++ A SN + S+FSAT+P VEELA SIM
Sbjct: 274 LDLSTVEQLVIDEADRMFDRG-FVEQTDALLAALSNAKLRTSIFSATIPAKVEELANSIM 332
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D VRVIVG K AS SI QKLVF GSE+GKLLA+RQ + PPV+IF+QS RAK
Sbjct: 333 RDPVRVIVGHKEAASSSIDQKLVFTGSEDGKLLAVRQMIQQGEFKPPVIIFLQSITRAKA 392
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + VIH++ + QR+ + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 393 LFHELVYDRLNVDVIHAERTPAQRDEVIRRFKNGDIWVLITTDVLARGVDFKGVNLVINY 452
Query: 236 DFPDSGAAYIHRI 248
D P + AY+HRI
Sbjct: 453 DVPQTAQAYVHRI 465
>gi|380019489|ref|XP_003693637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis florea]
Length = 512
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRR--K 55
LA QT REC +L++G F+I ++ K L + S DILI+TP R+ + +
Sbjct: 161 LAKQTYRECLRLSEGYNFRIHIISKINQALNKYGPKSSQKFDILITTPKRIIYLLNQDPP 220
Query: 56 KIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
I + VE+L++DE DKLFE G ++ + K+C++ + +++FSAT V + R
Sbjct: 221 AISFNNVEWLIVDEVDKLFENGIRCFRDQLEKISKSCTSEKLHKAMFSATNTPIVTKWCR 280
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V VG +N A++ ++Q+L+F G+E GKL+ALR + + PPVL+FVQSKERA
Sbjct: 281 RNLKGLITVTVGHRNAATDLVEQELLFVGAERGKLVALRNIIQKGILPPVLVFVQSKERA 340
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL +DGI VIH+D +QTQR+N V FR GK WVLI T+++ARG+DFKG+N VI
Sbjct: 341 QELFNELIYDGINVDVIHADRTQTQRDNVVRCFREGKIWVLICTELMARGIDFKGINLVI 400
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 401 NYDFPLSAISYIHRI 415
>gi|260799746|ref|XP_002594845.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
gi|229280082|gb|EEN50856.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
Length = 724
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 166/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA QT ++L +G F+ ++K + S DIL++TP RL +++
Sbjct: 291 LAKQTFTWFQRLGEGRGFRTYYIEKPAQAAKKFGPNSAKKFDILVTTPNRLVYMLKQDPP 350
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ L VE+LV+DE+DKLFE G + + +AC + + R++FSAT VE+ +
Sbjct: 351 IVSLHSVEWLVVDESDKLFEEGKQGFRDQLGVIYQACDSSHVRRAMFSATFAYDVEQWCK 410
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A ++++Q+L+F GSE GKLLA+R+ + L PPVLIFVQSKERA
Sbjct: 411 VNLDNVVTVSIGARNSAVDTVEQQLLFVGSESGKLLAMRELVRKGLTPPVLIFVQSKERA 470
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL +DGI VIH+D +QTQR+N V FR GK WVLI T+++ RG+DFKGVN VI
Sbjct: 471 KELFHELIYDGINVDVIHADRTQTQRDNTVKCFRTGKIWVLICTELMGRGIDFKGVNLVI 530
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +YIHRI
Sbjct: 531 NYDFPTSAVSYIHRI 545
>gi|426348586|ref|XP_004041913.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Gorilla
gorilla gorilla]
Length = 551
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 166/249 (66%), Gaps = 7/249 (2%)
Query: 7 RECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK--IDLSR 61
RE K+++G F+I ++ K V + S DIL++TP RL +++ IDL+
Sbjct: 204 RELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTS 263
Query: 62 VEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ + + +
Sbjct: 264 VEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNV 323
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGE 179
+ V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERAKEL+ E
Sbjct: 324 ISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHE 383
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
L ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VINYDFP
Sbjct: 384 LIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPT 443
Query: 240 SGAAYIHRI 248
S YIHRI
Sbjct: 444 SSVEYIHRI 452
>gi|312380576|gb|EFR26532.1| hypothetical protein AND_07336 [Anopheles darlingi]
Length = 608
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 172/256 (67%), Gaps = 8/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS----TDLSKFSCDILISTPLRL--RLAIRR 54
LA QT RE +L G + +++ RS T S DIL++TP R+ LA +
Sbjct: 222 LAKQTQREALRLGDGMNIRTHVIRTVDDRSKCDYTLESGRKYDILVTTPNRICYLLAQKP 281
Query: 55 KKIDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+IDLS ++++V+DEADKLFE + + +D V+ AC NP+ V +LFSAT ++
Sbjct: 282 PQIDLSNIQWVVVDEADKLFEDSKNSFREQLDTVLNACVNPTKVVALFSATQTREADQWV 341
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
S + +R +G+ N+A +S++QKL+F G+E GKLLA R+ A+ L+PPVL+FVQSK+R
Sbjct: 342 ASNVPRRIRFSIGQANSAVDSVEQKLLFTGNESGKLLAFRELVAQGLSPPVLVFVQSKDR 401
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A++L+ EL +DG+ VIHSD SQ +R+N V FR GK W+LI T++++RG+DFKGVN V
Sbjct: 402 AQQLFTELIYDGLNVDVIHSDRSQRERDNVVRAFREGKIWILICTELMSRGIDFKGVNLV 461
Query: 233 INYDFPDSGAAYIHRI 248
+NYDFP S +Y+HRI
Sbjct: 462 VNYDFPPSTISYVHRI 477
>gi|255719940|ref|XP_002556250.1| KLTH0H08646p [Lachancea thermotolerans]
gi|238942216|emb|CAR30388.1| KLTH0H08646p [Lachancea thermotolerans CBS 6340]
Length = 566
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 167/256 (65%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKL------AKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL A+ I L+ K L +R+ +S D++ISTPLRL
Sbjct: 209 LANQIFVECSKLSHKIYLARKRPLNIALLSKSLSAKLRNKVISDKKYDLIISTPLRLIDV 268
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++L+ DEADKLF+ ++ D ++ +C + + +S+FSAT+P +EE+
Sbjct: 269 VKNEALDLSDVKHLIFDEADKLFD-STFVEQADSILASCQDSQLRKSMFSATVPSSLEEV 327
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
SIM D VR+I+G K A+ +I+QKLV+ G+EEGKL+A+RQ E PPV+IF++S
Sbjct: 328 VNSIMLDPVRIIIGHKEAANVNIEQKLVYCGNEEGKLVAIRQMIQEGGFKPPVIIFLESI 387
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK L+ EL +D + VIH++ +Q QR ++ FR G+ W LI TDV+ARG+DFKGVN
Sbjct: 388 TRAKALFHELLYDNLNVDVIHAERTQVQRNTIIERFRTGELWCLICTDVLARGVDFKGVN 447
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 448 LVINYDVPRSAQAYVH 463
>gi|195379282|ref|XP_002048409.1| GJ13954 [Drosophila virilis]
gi|194155567|gb|EDW70751.1| GJ13954 [Drosophila virilis]
Length = 605
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 166/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L +G + + K + + C DILISTP R+R ++++
Sbjct: 206 LAQQIYRECAELTRGTGLRTHFISK-VSEARQQHGPDCKQKYDILISTPNRVRFLLQQQP 264
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+D +E+ VLDEAD+L E G N + +D + AC++P + FSAT V + A
Sbjct: 265 PLLDFKGIEWFVLDEADRLMEEGQNNFKEQLDEIYAACTHPQKRVAFFSATYTVPVAKWA 324
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VRV +G +N+A+++++Q+L+F GSE GKLLA+R+ + L PPVL+FVQSK+R
Sbjct: 325 LRHLKNLVRVTIGVQNSATDTVQQELLFVGSESGKLLAVREMVRQGLQPPVLVFVQSKDR 384
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ +Q QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 385 AKQLFEELLYDGINVDVIHAERTQHQRDNCVRAFREGHIWVLICTELMGRGIDFKGVNLV 444
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP S +YIHRI
Sbjct: 445 INYDFPPSTISYIHRI 460
>gi|172355578|ref|NP_001116486.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus (Silurana)
tropicalis]
gi|171846831|gb|AAI61533.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 54 LANQTHRELVKLSDGIGFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 113
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 114 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 173
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 174 LHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFTPPVLVFVQSIERA 233
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 234 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 293
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 294 NYDFPTSAVEYIHRI 308
>gi|113197619|gb|AAI21228.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 595
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LANQTHRELVKLSDGIGFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 372 LHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFTPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 492 NYDFPTSAVEYIHRI 506
>gi|401398472|ref|XP_003880323.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
gi|325114733|emb|CBZ50289.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
Length = 685
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 165/252 (65%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD--LSKFS-CDILISTPLRLRLAIRRKKI 57
LA QT RE LA F+ +L+ E + TD LS+ D + +TPLRL +R ++
Sbjct: 333 LAKQTQREFDSLAGARGFRCRLLD-EQKQGTDQPLSQAKRVDAVATTPLRLVQFLRDGRV 391
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
L++ +LVLDEADKL ++G +D ++ C+ P + LFSATLP V LA S++H
Sbjct: 392 SLAQCRHLVLDEADKLLDLG-FAPQLDEILAGCTFPRLQVCLFSATLPPEVLRLADSLLH 450
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-SFAESLNPPVLIFVQSKERAKEL 176
+ V + +G N A+ SI+Q+L+F +EEGKLLALR PPVLIFVQSKERAK+L
Sbjct: 451 NPVHISIGAPNAAATSIEQELLFCTNEEGKLLALRTLHLTGKFVPPVLIFVQSKERAKQL 510
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y EL +DGI IH+D ++ QR++ V+ FR G+ WVLI TDV+ARG+DFK V VINYD
Sbjct: 511 YCELVYDGIFVECIHADKTKKQRDDIVEAFRRGQIWVLICTDVMARGVDFKNVELVINYD 570
Query: 237 FPDSGAAYIHRI 248
FP S A YIHRI
Sbjct: 571 FPQSAAVYIHRI 582
>gi|56972628|gb|AAH88581.1| ddx52-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 585
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LANQTHRELVKLSDGIGFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 372 LHLDNVVSVSIGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFTPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 492 NYDFPTSAVEYIHRI 506
>gi|410915742|ref|XP_003971346.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Takifugu
rubripes]
Length = 628
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 167/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS---CDILISTPLRLRLAIRRKK- 56
LA+QT RE +L G F++ ++ K + + S DILISTP RL +++
Sbjct: 261 LASQTYRELLRLTDGVGFRVHIIDKASLAAKKYGPRSNKKYDILISTPNRLVFLLKQDPP 320
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+DLS VE+LV+DE+DKLFE G + + ACS + R+ FSAT VE+ R
Sbjct: 321 ALDLSSVEWLVVDESDKLFEDGKTGFRDQLASIFLACSGSKVRRAFFSATCTSDVEQWCR 380
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +NTA E++ Q+L+F G+E GKLLA+R+ + PP+L+FVQSK+RA
Sbjct: 381 LNLDNLVSVNIGPRNTAVETVDQELLFVGTENGKLLAVREIIKKGFLPPMLVFVQSKDRA 440
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL ++GI VIH++ +Q QR+N V+ FR+GK WVLI T ++ARG+DFKGVN V+
Sbjct: 441 RELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVL 500
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 501 NYDFPTSSVEYIHRI 515
>gi|195166521|ref|XP_002024083.1| GL22752 [Drosophila persimilis]
gi|194107438|gb|EDW29481.1| GL22752 [Drosophila persimilis]
Length = 597
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 165/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DILISTP R+R ++++
Sbjct: 204 LAQQIYRECSELTRETGLRTHFISK-VSEAKQKHGAECKQKYDILISTPNRVRFLLQQQP 262
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DL VE+ VLDEAD+L E G N + +D + ACS+P + FSAT V + A
Sbjct: 263 PLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWA 322
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R + L PPVL+FVQSK+R
Sbjct: 323 LRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNLVRQGLQPPVLVFVQSKDR 382
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 383 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGNIWVLICTELMGRGIDFKGVNLV 442
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 443 INYDFPPTTISYIHRI 458
>gi|198466271|ref|XP_002135148.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
gi|198150524|gb|EDY73775.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 165/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DILISTP R+R ++++
Sbjct: 204 LAQQIYRECSELTRETGLRTHFISK-VSEAKQKHGAECKQKYDILISTPNRVRFLLQQQP 262
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DL VE+ VLDEAD+L E G N + +D + ACS+P + FSAT V + A
Sbjct: 263 PLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWA 322
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R + L PPVL+FVQSK+R
Sbjct: 323 LRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNLVRQGLQPPVLVFVQSKDR 382
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 383 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGNIWVLICTELMGRGIDFKGVNLV 442
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 443 INYDFPPTTISYIHRI 458
>gi|193632062|ref|XP_001950933.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Acyrthosiphon pisum]
Length = 528
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 168/259 (64%), Gaps = 16/259 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR-STDLSKFSC------DILISTPLRLRLAIR 53
LA QT REC +L +G I L + + D KF+ DILI+TP RL ++
Sbjct: 135 LAKQTLRECTRLCEG----IGLRAHTFTKINKDKEKFNPKLAQKFDILIATPNRLVFLLQ 190
Query: 54 RKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVE 109
++ ++L+ +E+L++DE+DKLFE G + + KAC P+ R++FSAT V
Sbjct: 191 QEPPAVELNNIEWLIIDESDKLFETGVRGFRDQLAIIYKACG-PNAKRAMFSATYTVEVA 249
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
+ ++ + + V VG +NT + ++Q+LVF G+EEGKL+A+R + L+PPVLIF+QS
Sbjct: 250 KWSKKNLDGLIAVTVGNRNTTTTMVEQELVFVGNEEGKLIAMRDLVKKGLSPPVLIFLQS 309
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
KERAKEL+ EL +DGI IH+D +Q QR+N V FR GK WVLI T+++ RG+DFKGV
Sbjct: 310 KERAKELFSELIYDGINVDAIHADRTQQQRDNTVKAFREGKIWVLICTELMGRGIDFKGV 369
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYDFP S +YIHRI
Sbjct: 370 NLVVNYDFPSSAISYIHRI 388
>gi|85683111|gb|ABC73531.1| CG5589 [Drosophila miranda]
Length = 356
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 165/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DILISTP R+R ++++
Sbjct: 99 LAQQIYRECSELTRETGLRTHFISK-VSEAKQKHGAECKQKYDILISTPNRVRFLLQQQP 157
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DL VE+ VLDEAD+L E G N + +D + ACS+P + FSAT V + A
Sbjct: 158 PLLDLKGVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWA 217
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R + L PPVL+FVQSK+R
Sbjct: 218 LRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAMRNLVRQGLQPPVLVFVQSKDR 277
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ SQ QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 278 AKQLFEELLYDGINVDVIHAERSQHQRDNCVRAFREGNIWVLICTELMGRGIDFKGVNLV 337
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 338 INYDFPPTTISYIHRI 353
>gi|50306033|ref|XP_452978.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660546|sp|Q6CSW1.1|ROK1_KLULA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49642111|emb|CAH01829.1| KLLA0C17424p [Kluyveromyces lactis]
Length = 579
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 171/260 (65%), Gaps = 19/260 (7%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD-------------LSKFSCDILISTPLR 47
LA Q EC KLA +I L KK ++ +S+ DI+ISTPLR
Sbjct: 215 LANQIFIECSKLAN----KIYLDKKRPLQVALLSKSLSSKLKNKVISEDKYDIIISTPLR 270
Query: 48 LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDF 107
L ++ + ++L +V++L+ DEADKLF+ ++ D ++ +C++P + +++FSAT+P
Sbjct: 271 LITVVQEEALNLGKVKHLIFDEADKLFD-KTFVEQTDDILSSCTDPHLRKTMFSATIPSN 329
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIF 166
VEE+A++IM+D +RVI+G K A+ +I Q+LVF G+EEGKL+A+RQ E PPV+IF
Sbjct: 330 VEEIAQTIMNDPIRVIIGHKEAANINIDQQLVFCGNEEGKLIAIRQLVLEGEFKPPVIIF 389
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
++S RAK L+ EL +D + VIH++ +Q QR+ ++ F++G W LI TDV+ARG+DF
Sbjct: 390 LESITRAKALFHELLYDKLNVDVIHAERTQVQRDKIIERFKSGDLWCLICTDVLARGVDF 449
Query: 227 KGVNCVINYDFPDSGAAYIH 246
KGVN VINYD P S AY+H
Sbjct: 450 KGVNLVINYDVPRSAQAYVH 469
>gi|403369815|gb|EJY84760.1| hypothetical protein OXYTRI_17392 [Oxytricha trifallax]
Length = 634
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 162/235 (68%), Gaps = 10/235 (4%)
Query: 20 IKLMKKELVRSTDLSKF-----SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLF 74
++ ++K L TD F SC+ILISTPL+L ++ K L+ +E+LV+DEADK+F
Sbjct: 245 VRFLRKSLF-PTDQESFNQLTQSCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMF 301
Query: 75 EVGNLLKHIDPVVKACSNP-SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
E+G L+ +D +++ + I + LFSAT+ +EEL R+IM D +++ +G KN +++
Sbjct: 302 ELG-FLEQVDQILEQQNEQYKICKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQL 360
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
I Q++ + G E+GKL LR+ A+ PP+LIFVQSK RAKELY EL +DG+ VIH+D
Sbjct: 361 IDQQIQYVGDEQGKLHTLRELLADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 420
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +R+ + FR GK WVLIATD+++RG+DFKGVN V+NYDFP S +YIHRI
Sbjct: 421 KKKHERDEIIKQFRLGKIWVLIATDLMSRGIDFKGVNTVVNYDFPQSIVSYIHRI 475
>gi|403372410|gb|EJY86104.1| hypothetical protein OXYTRI_15906 [Oxytricha trifallax]
Length = 614
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 162/235 (68%), Gaps = 10/235 (4%)
Query: 20 IKLMKKELVRSTDLSKF-----SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLF 74
++ ++K L TD F SC+ILISTPL+L ++ K L+ +E+LV+DEADK+F
Sbjct: 225 VRFLRKSLF-PTDQESFNQLTQSCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMF 281
Query: 75 EVGNLLKHIDPVVKACSNP-SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
E+G L+ +D +++ + I + LFSAT+ +EEL R+IM D +++ +G KN +++
Sbjct: 282 ELG-FLEQVDQILEQQNEQYKICKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQL 340
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
I Q++ + G E+GKL LR+ A+ PP+LIFVQSK RAKELY EL +DG+ VIH+D
Sbjct: 341 IDQQIQYVGDEQGKLHTLRELLADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 400
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +R+ + FR GK WVLIATD+++RG+DFKGVN V+NYDFP S +YIHRI
Sbjct: 401 KKKHERDEIIKQFRLGKIWVLIATDLMSRGIDFKGVNTVVNYDFPQSIVSYIHRI 455
>gi|403346916|gb|EJY72868.1| hypothetical protein OXYTRI_06004 [Oxytricha trifallax]
Length = 613
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 162/235 (68%), Gaps = 10/235 (4%)
Query: 20 IKLMKKELVRSTDLSKF-----SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLF 74
++ ++K L TD F SC+ILISTPL+L ++ K L+ +E+LV+DEADK+F
Sbjct: 225 VRFLRKSLF-PTDQESFNQLTQSCEILISTPLKLAELCQQYK--LNNLEFLVVDEADKMF 281
Query: 75 EVGNLLKHIDPVVKACSNP-SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
E+G L+ +D +++ + I + LFSAT+ +EEL R+IM D +++ +G KN +++
Sbjct: 282 ELG-FLEQVDQILEQQNEQYKICKFLFSATMQPGIEELVRTIMEDPIKIQMGIKNASNQL 340
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
I Q++ + G E+GKL LR+ A+ PP+LIFVQSK RAKELY EL +DG+ VIH+D
Sbjct: 341 IDQQIQYVGDEQGKLHTLRELLADGFEPPMLIFVQSKHRAKELYHELIYDGLNVNVIHAD 400
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +R+ + FR GK WVLIATD+++RG+DFKGVN V+NYDFP S +YIHRI
Sbjct: 401 KKKHERDEIIKQFRLGKIWVLIATDLMSRGIDFKGVNTVVNYDFPQSIVSYIHRI 455
>gi|51261421|gb|AAH79986.1| LOC446276 protein, partial [Xenopus laevis]
Length = 587
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LASQTHRELVKLSDGIGFRIHVIDKAAVSAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V VG +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 372 LHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFAPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP YIHRI
Sbjct: 492 NYDFPAGAVEYIHRI 506
>gi|67677953|gb|AAH97566.1| LOC446276 protein, partial [Xenopus laevis]
Length = 585
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LASQTHRELVKLSDGIGFRIHVIDKAAVSAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V VG +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 372 LHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFAPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP YIHRI
Sbjct: 492 NYDFPAGAVEYIHRI 506
>gi|3646126|emb|CAA09374.1| ATP-dependent RNA helicase [Homo sapiens]
Length = 420
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 67 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 126
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSA L + A
Sbjct: 127 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAILHMMLNSGAN 186
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
S + G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 187 STWTMSSVCPFGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 246
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 247 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 306
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 307 NYDFPTSSVEYIHRI 321
>gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni]
gi|194164208|gb|EDW79109.1| GK12420 [Drosophila willistoni]
Length = 541
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 166/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DILISTP R+R ++++
Sbjct: 202 LAQQIYRECSELTRETGLRTHFISK-VSEAKQQHGPECKQKYDILISTPNRVRFLLQQEP 260
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DLS VE+ VLDEAD+L E G N + +D + ACS+ + FSAT V + A
Sbjct: 261 PLLDLSAVEWFVLDEADRLMEEGKNNFKEQLDDIYSACSHSGKRVAFFSATYTVPVAKWA 320
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+++++Q+L+F GSE GKL+A+R E L+PPVLIFVQSK+R
Sbjct: 321 LRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLVAIRNLVKEGLHPPVLIFVQSKDR 380
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ +Q QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 381 AKQLFEELLYDGINVDVIHAERTQHQRDNCVRAFREGNIWVLICTELMGRGIDFKGVNLV 440
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 441 INYDFPPTTISYIHRI 456
>gi|148222272|ref|NP_001086456.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus laevis]
gi|117167895|gb|AAI24841.1| LOC446276 protein [Xenopus laevis]
Length = 614
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 165/255 (64%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LASQTHRELVKLSDGIGFRIHVIDKAAVSAKRFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V VG +N+A E+++Q L+F GSE GKLLA+R + PPVL+FVQS ERA
Sbjct: 372 LHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFAPPVLVFVQSIERA 431
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++ARG+DFKGVN VI
Sbjct: 432 KELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLARGIDFKGVNMVI 491
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP YIHRI
Sbjct: 492 NYDFPAGAVEYIHRI 506
>gi|443693266|gb|ELT94682.1| hypothetical protein CAPTEDRAFT_187719 [Capitella teleta]
Length = 604
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 166/256 (64%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC------DILISTPLRLRLAIRR 54
LA QT REC +++ G F+I + K ST + KF DIL++TP RL +++
Sbjct: 226 LAKQTYRECMRISDGLGFRIHYINKV---STAIDKFGPKSSQRFDILVTTPNRLIFMLKQ 282
Query: 55 KK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
+ IDL +E+L++DE+DKLFE G + + + KAC + ++ R+ FSAT VEE
Sbjct: 283 EPPAIDLKNIEWLIVDESDKLFEDGKTGFREQLAEIFKACDSTNVRRAFFSATFTYDVEE 342
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
+ + + V+V +G +N+A+ +I+QKL F G+E GKLLA+R + PPVL+FVQSK
Sbjct: 343 WCKLNLDNVVQVYIGARNSATHTIEQKLEFVGTETGKLLAIRDLIRKGFQPPVLVFVQSK 402
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
+RAKEL+ EL +DGI VIH+ +Q QR+ V FR G W+LI T+++ RG+DFKGVN
Sbjct: 403 DRAKELFKELLYDGINVDVIHAGRTQAQRDRVVRCFRQGDIWLLICTELMGRGIDFKGVN 462
Query: 231 CVINYDFPDSGAAYIH 246
VINYDFP + +YIH
Sbjct: 463 LVINYDFPQTAISYIH 478
>gi|424513172|emb|CCO66756.1| PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein
7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr
virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48)
(Zinc finger protein [Bathycoccus prasinos]
Length = 991
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 169/284 (59%), Gaps = 49/284 (17%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC-------DILISTPLRLRLAIR 53
LATQ+TR C L+ G +R T LSK + DILISTPLRL +R
Sbjct: 571 LATQSTRICTLLSDG------------LRVTQLSKANAANDFDKVDILISTPLRLASLLR 618
Query: 54 RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS------------------- 94
+KKI VE+LVLDEADKLFE+G ++ ID VV AC NP
Sbjct: 619 QKKISTHAVEFLVLDEADKLFEMG-FVEQIDAVVHACDNPDYTNDDDDKKKKKKKKKKSP 677
Query: 95 ---------IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
+++LFSATLP+ E LARS+MH VR+ VG +N+A+ESI QKL+F G E
Sbjct: 678 SSKTTKKKKCLKALFSATLPETAERLARSVMHHCVRLTVGERNSANESISQKLIFCGKES 737
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGI-RAGVIHSDLSQTQRENAVD 204
GK+LA++Q + + P++IF QSK+R ++ EL + G+IHSD+S +R++ VD
Sbjct: 738 GKILAVKQMVQKGVQTPLIIFAQSKDRCIQVAKELTGGALGEVGLIHSDMSDKKRKSIVD 797
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR GK L ATD++ARGMDF V V+N+DFP + AYIHRI
Sbjct: 798 LFRIGKLNCLCATDLMARGMDFAAVGTVVNFDFPLTSTAYIHRI 841
>gi|50547433|ref|XP_501186.1| YALI0B21538p [Yarrowia lipolytica]
gi|74660084|sp|Q6CDS6.1|ROK1_YARLI RecName: Full=ATP-dependent RNA helicase ROK1
gi|49647052|emb|CAG83439.1| YALI0B21538p [Yarrowia lipolytica CLIB122]
Length = 547
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 156/223 (69%), Gaps = 4/223 (1%)
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
+R+ +S DI I+TPLRL A+ +DL ++ ++ DEADKLFE G +D ++
Sbjct: 232 LRNGKVSSQKYDICITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKG-FATQVDDIL 290
Query: 88 KACSNPSIVRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEG 146
AC + I ++LFSAT+P VE+LA SIM D +R+I+G K A+++++QKLV+AG+EEG
Sbjct: 291 AACPS-GIQKTLFSATIPASVEQLANSIMSTDPLRIIIGNKQAAAQTVEQKLVYAGNEEG 349
Query: 147 KLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+A+RQ E L PV+IF+QS +RAK L+ EL FDGI IH D++ +R + +D
Sbjct: 350 KLVAIRQMAREGQLVAPVIIFLQSIDRAKALFKELVFDGINVDQIHGDMTAAKRASVIDR 409
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G+ WVLI TDV+ARG+DF+G+N VINYD P S +Y+HRI
Sbjct: 410 FRNGEVWVLICTDVLARGIDFRGINLVINYDVPQSAQSYVHRI 452
>gi|19113945|ref|NP_593033.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175447|sp|Q09775.1|ROK1_SCHPO RecName: Full=ATP-dependent RNA helicase rok1
gi|1008436|emb|CAA91073.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe]
Length = 481
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/252 (46%), Positives = 165/252 (65%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
L Q R+ +KL+ G +I + K ++ + D+ I TP+RL AI+ +
Sbjct: 127 LCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQ-TGL 185
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
+VE+ V+DEAD+LFE G ++ D ++ AC++ +I +SLFSAT+P VEELA+ +
Sbjct: 186 SFEKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTV 244
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +R+IVG K+ A++SI Q+L+F GS+ K++ LRQ + L P V+IFVQ ERAK L
Sbjct: 245 DPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKAL 304
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y EL FD I GVIH +L Q +RE A+ FR G+ WVLIATD++ARG+DF GV VIN+D
Sbjct: 305 YTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
Query: 237 FPDSGAAYIHRI 248
FP S +YIHRI
Sbjct: 365 FPQSVHSYIHRI 376
>gi|432897373|ref|XP_004076440.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Oryzias
latipes]
Length = 657
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS---CDILISTPLRLRLAIRRKK- 56
LA+QT RE +L++G F++ ++ K + + S DIL+STP RL +++
Sbjct: 257 LASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPHSNKKYDILVSTPNRLVFLLKQDPP 316
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS VE+L++DE+DKLFE G + + + +C + R+ FSAT VE+ R
Sbjct: 317 AIDLSCVEWLIVDESDKLFEDGKRGFREQLATIFLSCCGAKVRRAFFSATCTTEVEQWCR 376
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +NTA ++++Q+L+F GSE GKL+A+R + PP+L+FVQS ERA
Sbjct: 377 LNLDNLVSVNIGHRNTAVDTVEQELLFVGSESGKLVAMRDIVKKGFLPPMLVFVQSIERA 436
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL+ EL ++GI VIH++ +Q QR+N V+ FR+GK WVLI T ++ARG+DFKGVN V+
Sbjct: 437 RELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVV 496
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 497 NYDFPTSAVEYIHRI 511
>gi|195021969|ref|XP_001985492.1| GH14471 [Drosophila grimshawi]
gi|193898974|gb|EDV97840.1| GH14471 [Drosophila grimshawi]
Length = 603
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 164/256 (64%), Gaps = 9/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC----DILISTPLRLRLAIRRKK 56
LA Q REC +L + + + K + + C DILISTP R+R ++++
Sbjct: 203 LAQQIYRECGELTRSTGLRTHFISK-VSEARQQHGPECKQKYDILISTPNRVRFMLQQQP 261
Query: 57 --IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+DL +E+ VLDEAD+L E G N + +D + AC++ + FSAT V + A
Sbjct: 262 PLLDLKGIEWFVLDEADRLMEEGQNNFKEQLDDIYAACTHAQKRVAFFSATYTVPVAKWA 321
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ + VR+ +G +N+A+++++Q+L+F GSE GKLLA+R+ L PPVL+FVQSKER
Sbjct: 322 LRHLKNLVRITIGVQNSATDTVQQELLFVGSESGKLLAVREMVRNGLQPPVLVFVQSKER 381
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AK+L+ EL +DGI VIH++ +Q QR+N V FR G WVLI T+++ RG+DFKGVN V
Sbjct: 382 AKQLFEELLYDGINVDVIHAERTQHQRDNCVRAFREGHIWVLICTELMGRGIDFKGVNLV 441
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP + +YIHRI
Sbjct: 442 INYDFPPTTISYIHRI 457
>gi|291001203|ref|XP_002683168.1| predicted protein [Naegleria gruberi]
gi|284096797|gb|EFC50424.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 166/261 (63%), Gaps = 23/261 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKKI 57
LA Q R + L G ++I +R D KF DILISTP+RL I+ I
Sbjct: 62 LADQIFRNLEVLGSGKDWKI-------LR--DNHKFQSKRNDILISTPMRLLSMIKSGII 112
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS--- 114
DL+ VE LV DEAD+LF++G ++ +D ++ C+NP++V++ FSAT+P +E ++
Sbjct: 113 DLTNVEMLVFDEADRLFDLG-FIEQVDEILGFCTNPNLVKTYFSATIPLSLEHTLKTQTS 171
Query: 115 -IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKER 172
+ D+V+V +G +N ++I+QKL+F GSEEGKLLAL++ E L PPVLIFVQS +R
Sbjct: 172 LLKIDSVQVSIGVRNAGPDTIEQKLIFVGSEEGKLLALKERIRIEGLKPPVLIFVQSIDR 231
Query: 173 AKELYGELAFD-----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFK 227
AK+LY EL F G+ + IH S + + +FR GKTW LI TDV+ARG+DFK
Sbjct: 232 AKQLYKELLFTLTSTTGMSSNYIHGKRSDKKNHEVIQNFRTGKTWALICTDVMARGLDFK 291
Query: 228 GVNCVINYDFPDSGAAYIHRI 248
++CVINYDFP S YIHRI
Sbjct: 292 NISCVINYDFPTSVPNYIHRI 312
>gi|170056673|ref|XP_001864136.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
gi|167876423|gb|EDS39806.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
Length = 572
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 164/253 (64%), Gaps = 7/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL---SKFSCDILISTPLRLRLAIRRKK- 56
LA QT RE +L + + ++ K +TD S+ DIL++TP R+
Sbjct: 221 LAKQTQREALRLCEEINLRTHVITKVDENTTDYGLESRKHYDILVTTPNRVCFLAGHNPP 280
Query: 57 -IDLSRVEYLVLDEADKLFEV--GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS ++++V+DEADKLFE + + +D ++ AC+NP V + FSAT+ V AR
Sbjct: 281 LIDLSNIQFVVVDEADKLFEESRNSFREQLDTIMAACTNPCKVVAFFSATVTKEVSAWAR 340
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M VR VG NTA++ + Q+L+F G+E GKLLA R++ + L PPVL+FVQSK+RA
Sbjct: 341 DHMPTRVRFSVGAVNTATDLVDQELLFVGNESGKLLAFREAVHKGLTPPVLVFVQSKDRA 400
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++L+ EL +DG+ VIH+D SQ +R+N V FR GK W+LI T++++RG+DFKGVN V+
Sbjct: 401 QQLFTELLYDGLNVDVIHADRSQRERDNVVRSFREGKIWILICTELMSRGIDFKGVNLVV 460
Query: 234 NYDFPDSGAAYIH 246
NYDFP S +Y+H
Sbjct: 461 NYDFPPSTISYVH 473
>gi|158300210|ref|XP_001689233.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|158300212|ref|XP_320199.4| AGAP012358-PA [Anopheles gambiae str. PEST]
gi|157013048|gb|EDO63299.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|157013049|gb|EAA00143.4| AGAP012358-PA [Anopheles gambiae str. PEST]
Length = 598
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 165/258 (63%), Gaps = 12/258 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS------CDILISTPLRL--RLAI 52
LA QT RE +L G++ ++ +V +S DIL++TP R+ L+
Sbjct: 223 LAKQTQREALRL--GDEMNLRTHVIHMVDDPKKCDYSFASGRSYDILVTTPNRICYLLSQ 280
Query: 53 RRKKIDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
KIDLS ++++V+DEADKLFE + +D V+ AC+NPS +LFSAT V
Sbjct: 281 NPPKIDLSNIQWVVIDEADKLFEDSKNSFRDQLDTVLTACNNPSKTIALFSATQTRDVNL 340
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
+ + +R +G N A E + QKL+F GSE GKLLA R+ A+ L+PPVL+FVQSK
Sbjct: 341 WVAKNVPNRIRFSIGLINGAVELVDQKLLFTGSESGKLLAFREMVAQGLHPPVLVFVQSK 400
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
+RA++L+ EL +DG+ VIHSD +Q +R+N V FR GK W+LI T++++RG+DFKGVN
Sbjct: 401 DRAQQLFTELIYDGLNVDVIHSDRTQRERDNVVRAFREGKIWILICTELMSRGIDFKGVN 460
Query: 231 CVINYDFPDSGAAYIHRI 248
V+NYDFP S +Y+HRI
Sbjct: 461 LVVNYDFPPSTISYVHRI 478
>gi|157134089|ref|XP_001663141.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870607|gb|EAT34832.1| AAEL012962-PA [Aedes aegypti]
Length = 591
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 161/253 (63%), Gaps = 7/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL---SKFSCDILISTPLRLRLAIRRKK- 56
LA QT RE +L + + ++ K +TD S+ DIL++TP R+
Sbjct: 221 LAKQTQRESLRLCEEINLRTHVITKVDENTTDYGLESRKHYDILVTTPNRICFLANHDPP 280
Query: 57 -IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDLS ++Y+V+DEADKLFE + +D ++ AC+NP V + FSAT+ V A
Sbjct: 281 LIDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWAS 340
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M + VR VG N A + ++Q+L+F GSE GKLLA R+ + L PPVL+FVQSK+RA
Sbjct: 341 ENMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREMVHKGLTPPVLVFVQSKDRA 400
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++L+ EL +DG+ VIH+D SQ +R+N V FR GK W+LI T++++RG+DFKGVN V+
Sbjct: 401 QQLFTELIYDGLNVDVIHADRSQKERDNVVRSFREGKIWILICTELMSRGIDFKGVNLVV 460
Query: 234 NYDFPDSGAAYIH 246
NYDFP S +Y+H
Sbjct: 461 NYDFPPSTISYVH 473
>gi|384247417|gb|EIE20904.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 159/253 (62%), Gaps = 9/253 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS-TDLSK---FSCDILISTPLRL-RLAIRRK 55
LA Q R +L KG L+ V + TD +K DI+++TPLRL +LA K
Sbjct: 106 LAAQIARVLTRLVKGLHLHCCLLSAAGVTAGTDFTKVLLLQMDIVVATPLRLSKLA---K 162
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
K D S VE+LV DEADKL + G + +D VV AC+NP V + FSATLP+ VEELARS+
Sbjct: 163 KADFSSVEFLVFDEADKLLDQG-FVTQMDKVVAACTNPRRVAAFFSATLPEKVEELARSL 221
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ VRV VG +N+A+ S++Q+LVF G+E GKL+ALR PP+L+F SK+R
Sbjct: 222 LKQPVRVTVGERNSAAASVQQRLVFVGNEAGKLIALRDLLGLGTRPPILVFTNSKQRCSA 281
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ +LA +G+ I +D + + R VD FR G+ VL+ TD++ARG+DF V VINY
Sbjct: 282 LHRDLALEGVLVDSISADQAPSARAATVDRFREGRMHVLVCTDLMARGIDFLNVQTVINY 341
Query: 236 DFPDSGAAYIHRI 248
DFP S Y+HR+
Sbjct: 342 DFPLSAVDYVHRV 354
>gi|342321094|gb|EGU13031.1| ATP-dependent RNA helicase ROK1 [Rhodotorula glutinis ATCC 204091]
Length = 650
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 146/225 (64%), Gaps = 12/225 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 92
K DILI+TPLRL AI+ + LS +L+LDEADKLFE+ N L+ D ++ AC+
Sbjct: 293 KGPIDILITTPLRLVFAIKSGTVSLSATSHLILDEADKLFEL-NFLEQTDEILAACAKDR 351
Query: 93 PS----IVRSLFSATLPDFVEELARSIMHDA----VRVIVGRKNTASESIKQKLVFAGSE 144
P+ I + +FSAT+P VEELA+ +M A VR IVG K A+ +I Q L F +E
Sbjct: 352 PAEAGEIRKGMFSATVPSSVEELAKGVMAGAGSGMVRAIVGHKEAATSTIDQTLSFVNTE 411
Query: 145 EGKLLALRQSF-AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAV 203
+ KLL+LR PPVLIFVQS +RAKEL EL FDGI A IH+D + +R+ V
Sbjct: 412 DHKLLSLRSMIQGGQFTPPVLIFVQSIQRAKELANELVFDGINADAIHADRTPQERDEIV 471
Query: 204 DDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F AG+ W LI TDV+ARG+DFKGV VINYDFP S +YIHRI
Sbjct: 472 RRFAAGQVWCLICTDVMARGVDFKGVKLVINYDFPQSAMSYIHRI 516
>gi|391340780|ref|XP_003744714.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Metaseiulus occidentalis]
Length = 520
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 164/254 (64%), Gaps = 7/254 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK----ELVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA QT RE +LA+G + ++ K + S+D++K S DI+++TP RL ++ K
Sbjct: 155 LAKQTYREVVRLAEGTGLRTYVLTKTSNAQKRFSSDMAK-SLDIMVTTPNRLVWLLKETK 213
Query: 57 IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
+ L RV++L++DE+D+LFE G + + +AC + + R++FSAT +++ R
Sbjct: 214 LTLGRVQHLIIDESDRLFEAGKSGFRDQLVKIYEACDSSKLKRAMFSATSSKDLDKWCRL 273
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ V V VG KN+A++ + QKL+F G+E GKL +RQ + PPVL+FV+SK AK
Sbjct: 274 HLDSVVIVAVGAKNSATKQVDQKLLFVGTENGKLFQIRQILRAGVRPPVLVFVESKAAAK 333
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
ELY L DG+ VIHSD + + R++ ++ FR GK W+LI T+++ RG+DFKGV VIN
Sbjct: 334 ELYSHLVLDGLNVDVIHSDRTISDRDSIMEQFRLGKIWILICTELMGRGIDFKGVQLVIN 393
Query: 235 YDFPDSGAAYIHRI 248
YDFP S A+YIHRI
Sbjct: 394 YDFPQSAASYIHRI 407
>gi|339234397|ref|XP_003382315.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
gi|316978689|gb|EFV61638.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
Length = 627
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 157/252 (62%), Gaps = 8/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFSCDILISTPLRLRLAIRRKK-- 56
L+ Q E KL G ++ L +L + K + DI+++TP RL A ++ +
Sbjct: 264 LSKQVYLELLKLTDGLNVKVHLTSNAPQLEDENNFDKENFDIMVTTPNRLIYAQQQSQPL 323
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+L+ + +L++DE DKLFE G+ + C I R LFSAT +E+ + +
Sbjct: 324 YNLNTIRWLIIDECDKLFESGDRGFR----KQQCDTVKIRRLLFSATFSYELEQWCKINL 379
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+D V V VG +N+A +S+KQ+LVF GSE GK+LALR F E PPVLIFVQSK+RA++L
Sbjct: 380 NDMVMVCVGARNSAVQSVKQELVFVGSEHGKVLALRNMFIEGFTPPVLIFVQSKDRAEQL 439
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y E FD ++ IHSDL + +REN + FR G TW+LI T++I RG+DFK VN VIN+D
Sbjct: 440 YNEFKFDEVKIDYIHSDLPKKERENTIKKFRRGDTWILICTELIGRGLDFKCVNLVINFD 499
Query: 237 FPDSGAAYIHRI 248
FP S +YIHRI
Sbjct: 500 FPTSSISYIHRI 511
>gi|410076108|ref|XP_003955636.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
gi|372462219|emb|CCF56501.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
Length = 571
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 166/258 (64%), Gaps = 13/258 (5%)
Query: 1 LATQTTRECKKL------AKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL K QI L+ + L ++ ++ DI+I+TPLRL
Sbjct: 209 LANQIYMECIKLTNRIFLGKKKPLQIGLLSRSLSAKFKNRVINDKKYDIIITTPLRLIDL 268
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS--NPSIVRSLFSATLPDFVE 109
+ + +DL+ + +L+ DEADKLF+ ++ D ++ S N + +S++SAT+P +E
Sbjct: 269 LNAEALDLNNLRHLIFDEADKLFD-KTFVEQSDSILSLISAKNLKLRKSMYSATIPSHIE 327
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQ 168
++A+S+M D VRVI+G K +A+ I+QKLV+ G+EEGKL+A+RQ E PPV+IF++
Sbjct: 328 DIAKSLMLDPVRVIIGHKESANSDIEQKLVYCGNEEGKLIAIRQLVQEGEFKPPVVIFLE 387
Query: 169 SKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
S RAK LY EL +D + VIH++ + TQR+ ++ F++G W LI TDV+ARG+DFKG
Sbjct: 388 SIVRAKALYHELMYDRMNVDVIHAERTATQRDKIIERFKSGDLWCLICTDVLARGIDFKG 447
Query: 229 VNCVINYDFPDSGAAYIH 246
VN VINYD P + AY+H
Sbjct: 448 VNLVINYDIPRNAQAYVH 465
>gi|395326045|gb|EJF58459.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 579
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 159/251 (63%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K + K DI+ISTPLRL +++ ++
Sbjct: 216 LAHQIHNECLKLAQGRKWRIVLFSKATAATLADKKVREKIDIIISTPLRLVASLQAGNLE 275
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V +L LDEAD++ + L+ + V+ AC++P I +++FSATLP E++A S++ D
Sbjct: 276 LDNVRHLFLDEADRMLDT-EFLEQVQEVIAACTHPEIQKAVFSATLPANAEKIAMSMLRD 334
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV+VG K+T I Q L + ++ KL L Q ++ NPPVLIFV S+ RA L
Sbjct: 335 PIRVVVGLKDTPLPLIAQSLTYVADDQSKLPTLLQYLSQPYNPPVLIFVSSQPRATSLAE 394
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL G+ +H+ +++ +RE+AV R G++WV+++T+V+ARGMDFKGV VINYDF
Sbjct: 395 ELVIAGVPNVDCLHAGMTKKEREDAVSRMRRGESWVMVSTEVMARGMDFKGVREVINYDF 454
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 455 PQSVQSYVHRI 465
>gi|392597064|gb|EIW86386.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 542
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 158/253 (62%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS----TDLSKFSCDILISTPLRLRLAIRRKK 56
LA Q EC KLA+G K++I L K + K DI+ISTPLRL AI+
Sbjct: 211 LAHQIHNECLKLAEGRKWKIVLFNKTTANALKDQQTRDKVVQDIIISTPLRLVAAIQEGN 270
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+ L V +LVLDEAD++ + L + ++ AC++P++ +++FSATLP E+LA +++
Sbjct: 271 VTLKNVRHLVLDEADRMLDA-EFLSQVQEIIAACTHPNLQKAVFSATLPAGAEKLAMAML 329
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +R++VG K+T I Q L + + KL +L FA+ NPPVL+F ++ RA L
Sbjct: 330 RNPIRIVVGLKDTPLPLIAQSLTYVADDASKLPSLLTYFAQPYNPPVLVFTSTQPRASSL 389
Query: 177 YGELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
EL GI +H+ +++ QRE+AV R G++W++++T+V+ARGMDFKGV VINY
Sbjct: 390 ASELIMSGIPNVDCLHAGMTRKQREDAVSRMRRGESWIIVSTEVMARGMDFKGVREVINY 449
Query: 236 DFPDSGAAYIHRI 248
DFP S +YIHRI
Sbjct: 450 DFPTSVQSYIHRI 462
>gi|403414605|emb|CCM01305.1| predicted protein [Fibroporia radiculosa]
Length = 874
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS-TDLS-KFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K + D S + DI+ISTPLR+ A++ ++
Sbjct: 512 LAHQIHNECLKLAQGRKWRIVLFSKATASTLADKSVQDKVDIIISTPLRMVSALQAGSLE 571
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V +LVLDEAD++ + L + ++ ACS+P + +++FSATLP E++A ++ D
Sbjct: 572 LRNVRHLVLDEADRMLDA-EFLTQVQEIITACSHPQVQKAVFSATLPAGAEKIAMDMLRD 630
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q L + + KL L Q ++ NPPVLIFV S+ RA L
Sbjct: 631 PIRIVVGLKDTPLPLIAQSLTYVADDPSKLPTLLQYLSQPYNPPVLIFVSSQPRATSLAE 690
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +G+ +H+ +S+ +RE+AV R G++WV+++T+V+ARGMDFKGV VINYDF
Sbjct: 691 ELVLNGVLNVDCLHAGMSKKEREDAVSRMRRGESWVMVSTEVMARGMDFKGVREVINYDF 750
Query: 238 PDSGAAYIHRI 248
P + +Y+HRI
Sbjct: 751 PQNVQSYVHRI 761
>gi|392571875|gb|EIW65047.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 576
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 162/257 (63%), Gaps = 16/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKL--------MKKELVRSTDLSKFSCDILISTPLRLRLAI 52
LA Q EC KLA+G K++I L MK + VR D++ISTPLRL ++
Sbjct: 210 LAHQIHNECLKLAQGRKWRIVLFSKATAATMKDKTVRD------KIDLVISTPLRLVASL 263
Query: 53 RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
+ ++L V ++VLDEAD++ + L+ ++ V+ AC+ P + +++FSATLP E++A
Sbjct: 264 KAGHLELGNVRHIVLDEADRMLDT-EFLEQVEEVIAACTYPDVQKAVFSATLPANAEKVA 322
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
S++ D +RV+VG K+T I Q L + ++ KL L Q ++ NPPVLIFV S+ R
Sbjct: 323 LSMLRDPIRVVVGLKDTPLPLIAQSLTYVADDQSKLPTLLQYLSQPYNPPVLIFVSSQPR 382
Query: 173 AKELYGELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A L EL GI +H+ LS+ +RE+AV R G++WV+++T+V+ARGMDFKGV
Sbjct: 383 AASLAEELIISGIPNVDCLHAGLSKKEREDAVSRMRRGESWVMVSTEVMARGMDFKGVRE 442
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP + +Y+HRI
Sbjct: 443 VINYDFPQTVQSYVHRI 459
>gi|427781675|gb|JAA56289.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 533
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 159/256 (62%), Gaps = 8/256 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA QT REC +L + + L+ + L K DIL+ TP RL +
Sbjct: 191 LARQTYRECLQLIRDTGLHVYLLSSLSSARSRLPKAQRKLDILVCTPNRLLCLTDSGVLT 250
Query: 59 LSRVEYLVLDEADKLFEVGN----LLKHIDPVVKACS-NPSIVRSLFSATLPDFVEELAR 113
L+RVE+L+LDE+DKLFE + + V +ACS +P + R+LFSAT D VE R
Sbjct: 251 LNRVEWLILDESDKLFENAGGPRGFREQLAKVCQACSASPLMRRALFSATATDQVEAWCR 310
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKER 172
+ + + VG +N A++ + QKL F GSE GKLLA+R E L PPVL+FVQSK+R
Sbjct: 311 LHLDAFLSLTVGIRNAAADLVDQKLQFVGSESGKLLAIRGLVKEGKLQPPVLVFVQSKQR 370
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
AKEL+ EL +DGI VIH++ +Q QR+ V FR+G+ WVLI T+V+ARG+DF+GV V
Sbjct: 371 AKELFAELVYDGINVDVIHAERTQAQRDRVVRAFRSGQVWVLICTEVLARGLDFQGVGLV 430
Query: 233 INYDFPDSGAAYIHRI 248
INYD P S +Y+HRI
Sbjct: 431 INYDVPPSVVSYVHRI 446
>gi|392573096|gb|EIW66238.1| hypothetical protein TREMEDRAFT_41061 [Tremella mesenterica DSM
1558]
Length = 546
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 162/252 (64%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q K + KG K++ ++ K E+ + T + DIL++TP RL I +++
Sbjct: 197 LAVQIHGVLKVMCKGRKWRCLVLSKATEMAK-TRRAGLGIDILVATPERLHHLINEQRVS 255
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ +++LDEAD+L + L ++P+V+AC++P + + L SAT+P E LAR+ + +
Sbjct: 256 LAETSHIILDEADRLLSP-DFLPQVEPIVEACTHPKVQKCLLSATIPAGAEALARTWLRE 314
Query: 119 A-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAKEL 176
VR++VG K++A ++ Q LVF +E GKL+ LRQ + P P LIFVQS ERA+EL
Sbjct: 315 GGVRIVVGIKDSAVTTVDQSLVFTATESGKLMTLRQLISSGDLPYPSLIFVQSIERAEEL 374
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
LA +G++ ++H S+T+RE AV FR G W+L+ T+V+ARGMDF+GV VINYD
Sbjct: 375 CKTLALEGVKVDMVHGGRSRTKREEAVVRFRKGDVWILVVTEVLARGMDFRGVKVVINYD 434
Query: 237 FPDSGAAYIHRI 248
FP + +YIHR+
Sbjct: 435 FPQTVQSYIHRV 446
>gi|302695853|ref|XP_003037605.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
gi|300111302|gb|EFJ02703.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
Length = 524
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 160/251 (63%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K S + DI+ISTPLRL +++ ++
Sbjct: 205 LAHQIHNECLKLAEGRKWRIILFSKATASTLSDKAVRDKVDIIISTPLRLVASLQTGDLE 264
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V +L+LDEAD++ + L ++ ++ +C++P + +++FSATLP E++A ++ +
Sbjct: 265 LQNVRHLILDEADRMLDP-EFLSQVEEIIASCTHPDVQKAVFSATLPAGAEKIAMDMLRN 323
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q L + + KL +L Q FAE NPPVLIF ++ RA L
Sbjct: 324 PIRIVVGLKDTPLPLISQSLTYVADDGSKLPSLLQYFAEPYNPPVLIFTSTQPRASSLAE 383
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +GI +H+ +++ +R++AV R G++WV+++T+V+ARGMDFKGV VINYDF
Sbjct: 384 ELILNGIPNVDCLHAGMTKKERDDAVSRMRKGESWVMVSTEVMARGMDFKGVREVINYDF 443
Query: 238 PDSGAAYIHRI 248
P S +YIHRI
Sbjct: 444 PTSVQSYIHRI 454
>gi|449550561|gb|EMD41525.1| hypothetical protein CERSUDRAFT_146544 [Ceriporiopsis subvermispora
B]
Length = 575
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 159/252 (63%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF---SCDILISTPLRLRLAIRRKKI 57
LA Q EC KLA+G K++I L K ST K D++ISTPLRL A++ I
Sbjct: 213 LAHQIHNECLKLAQGRKWRIVLFSKATA-STLADKNVRDKVDLVISTPLRLVAALQAGHI 271
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
+L V ++VLDEAD++ + L + VV AC+ P++ +++FSATLP E++A S++
Sbjct: 272 ELDNVRHIVLDEADRMLD-SEFLSQVQEVVAACTYPNVQKAVFSATLPAGAEKIAMSMLQ 330
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
D +RV+VG K+T I Q L + + KL L Q ++ NPPVLIFV ++ RA L
Sbjct: 331 DPIRVVVGLKDTPLPLIAQSLTYVADDPSKLPTLLQYLSQPYNPPVLIFVSTQPRAASLA 390
Query: 178 GELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
EL + I +H+ +++ +RE+AV R G++WV+++T+V+ARGMDFKGV VINYD
Sbjct: 391 EELVINSIPNVDCLHAGMTRKEREDAVSRMRRGESWVMVSTEVMARGMDFKGVREVINYD 450
Query: 237 FPDSGAAYIHRI 248
FP S +Y+HRI
Sbjct: 451 FPQSVQSYVHRI 462
>gi|157873736|ref|XP_001685372.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68128444|emb|CAJ08547.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 580
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ V+ +K DI I+TP R+ + +K +DLS
Sbjct: 223 LAQQIEREAFFLMKGQRWK-------FVQHGQTTK-KKDIFIATPGRILSLLEQKLLDLS 274
Query: 61 RVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + L ID ++ AC+ V SLF+ATL + VE ARS+M D
Sbjct: 275 NVQYLVFDEGDRLWDSRTDFLTVIDRILTACTRTDKVVSLFTATLSEKVEAAARSVMGAD 334
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + +A+ +KQ+LVF G+E GK++A+R E + PPVL+FVQS ER+KELY
Sbjct: 335 PVRIIVHGRRSANTHVKQRLVFCGNELGKVVAMRNLVREGITPPVLVFVQSVERSKELYE 394
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ +G+ ++H+ ++ QRE V FR GK WVL+ T+++ARG+DFK V VIN+DFP
Sbjct: 395 EIRMEGLHMAIMHAKMTVEQREETVLQFRLGKIWVLVTTELLARGIDFKNVGTVINFDFP 454
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 455 ATVDSYIHRV 464
>gi|4689114|gb|AAD27766.1|AF077033_1 putative ATP-dependent RNA helicase ROK1 [Homo sapiens]
Length = 598
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 159/255 (62%), Gaps = 8/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLF--EVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKL + G+ + P +FSAT VE+
Sbjct: 306 GIDLASVEWLVVDESDKLLKMQTGSETSWL-PFSWPAHPTRSEEPMFSATFAYDVEQWCN 364
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
S + + +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 365 STWTMSSVCPLEARNSAVETVEQELLFVGSETGKLLAVRELVKKGFNPPVLVFVQSIERA 424
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 425 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 484
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 485 NYDFPTSSVEYIHRI 499
>gi|403377916|gb|EAT36543.2| AAEL011378-PA, partial [Aedes aegypti]
Length = 322
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Query: 57 IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
IDLS ++Y+V+DEADKLFE + +D ++ AC+NP V + FSAT+ V A
Sbjct: 13 IDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWASE 72
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
M + VR VG N A + ++Q+L+F GSE GKLLA R+ + L PPVL+FVQSK+RA+
Sbjct: 73 NMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREMVHKGLTPPVLVFVQSKDRAQ 132
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L+ EL +DG+ VIH+D SQ +R+N V FR GK W+LI T++++RG+DFKGVN V+N
Sbjct: 133 QLFTELIYDGLNVDVIHADRSQKERDNVVRSFREGKIWILICTELMSRGIDFKGVNLVVN 192
Query: 235 YDFPDSGAAYIH 246
YDFP S +Y+H
Sbjct: 193 YDFPPSTISYVH 204
>gi|157129199|ref|XP_001655321.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
Length = 376
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Query: 57 IDLSRVEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
IDLS ++Y+V+DEADKLFE + +D ++ AC+NP V + FSAT+ V A
Sbjct: 67 IDLSNIQYIVVDEADKLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWASE 126
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
M + VR VG N A + ++Q+L+F GSE GKLLA R+ + L PPVL+FVQSK+RA+
Sbjct: 127 NMPNRVRFSVGVANMAVDLVEQELLFVGSESGKLLAFREMVHKGLTPPVLVFVQSKDRAQ 186
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L+ EL +DG+ VIH+D SQ +R+N V FR GK W+LI T++++RG+DFKGVN V+N
Sbjct: 187 QLFTELIYDGLNVDVIHADRSQKERDNVVRSFREGKIWILICTELMSRGIDFKGVNLVVN 246
Query: 235 YDFPDSGAAYIH 246
YDFP S +Y+H
Sbjct: 247 YDFPPSTISYVH 258
>gi|409051237|gb|EKM60713.1| hypothetical protein PHACADRAFT_110354 [Phanerochaete carnosa
HHB-10118-sp]
Length = 576
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 157/251 (62%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K + ++ DI+ISTPLR+ A++ +
Sbjct: 213 LAHQIHNECLKLAQGRKWRIVLFSKATAATLADKNAQDKVDIVISTPLRMVAALQSGNLK 272
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS V +LVLDEAD++ + L+ I ++ ACS P + +++FSATLP E +A +M +
Sbjct: 273 LSNVRHLVLDEADRMLDP-EFLEQIREIIAACSYPRVQKAVFSATLPANAERIAMDMMTN 331
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV+VG K+T I Q L + + KL L Q A+ NPPVL+FV ++ RA L
Sbjct: 332 PIRVVVGLKDTPLPLIAQSLTYVHDDSSKLPTLLQYLAQPYNPPVLVFVSTQPRASSLAE 391
Query: 179 ELAFDGIR-AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL + I+ +H+ +S+ +RE+AV R G++WV++ T+V+ARGMDFKGV VINYDF
Sbjct: 392 ELVLNDIQNVDCLHAGMSKKEREDAVSRMRKGESWVMVTTEVMARGMDFKGVREVINYDF 451
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 452 PQSVQSYVHRI 462
>gi|169844518|ref|XP_001828980.1| ROK1 [Coprinopsis cinerea okayama7#130]
gi|116510092|gb|EAU92987.1| ROK1 [Coprinopsis cinerea okayama7#130]
Length = 574
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K + T + DI++STPLRL A++ K +
Sbjct: 223 LAHQIYNECLKLAQGRKWRITLFSKATASTLATKEVRDKTDIIVSTPLRLVAAVQEGKFE 282
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V YLVLDEAD+L + L+ + +V +C++ + +++FSATLP VE++A ++ D
Sbjct: 283 LENVRYLVLDEADRLLDT-EFLEQTEELVASCTHSRLQKAIFSATLPAGVEKIAMDMLQD 341
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q L + + KL +L A+ NPPVL+F S+ RA L
Sbjct: 342 PIRLVVGLKDTPLPLISQSLTYVADDGSKLPSLLTYLAQPYNPPVLVFTSSQPRATSLAE 401
Query: 179 ELAFDGIR-AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL + I+ +H+ ++ +RE+ + R G+TW+LI T+V+ARGMDFKGV VINYDF
Sbjct: 402 ELLLNNIKNVDCLHAGMTNKEREDVITRMRKGETWILITTEVMARGMDFKGVREVINYDF 461
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 462 PTSVQSYVHRI 472
>gi|308801667|ref|XP_003078147.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116056598|emb|CAL52887.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 418
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 148/212 (69%), Gaps = 3/212 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA+Q+ R + L++G + + D SK D++++TP+RL++ ++ KI+LS
Sbjct: 199 LASQSARILRLLSRGVSGLKSCLLSKATAGNDFSKV--DVVVATPMRLKILLQDDKINLS 256
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+V YLVLDEADKLFE+G ++ ID VV AC N I R+LFSATLP+ VEELARS+M +
Sbjct: 257 KVLYLVLDEADKLFEMG-FVEQIDAVVAACDNKKITRALFSATLPEKVEELARSVMPRPI 315
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
R+ VG +N+AS +I Q++VF G E GKL+ALRQ + + PPV+IF QSK+RAK L EL
Sbjct: 316 RLTVGERNSASSTIAQRMVFCGHEAGKLMALRQIIRDGIKPPVIIFTQSKDRAKVLAKEL 375
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
DG+ G+IH+++S T+RE VD FR G+T+
Sbjct: 376 TGDGLHIGLIHAEMSDTKREEQVDRFRMGETY 407
>gi|146096246|ref|XP_001467744.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|398020630|ref|XP_003863478.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
gi|134072110|emb|CAM70809.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|322501711|emb|CBZ36792.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
Length = 584
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ V+ +K + DI I+TP R+ + +K +DLS
Sbjct: 223 LAQQIEREAFFLMKGQRWK-------FVQHGQTTK-NKDIFIATPGRIVSLLEQKLLDLS 274
Query: 61 RVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + L ID ++ AC+ V SLF+ATL + VE ARS+M D
Sbjct: 275 NVQYLVFDEGDRLWDSRTDFLTVIDRILTACTRTDKVVSLFTATLSEKVEAAARSVMGAD 334
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + +A+ +KQ+L+F G+E GK++A+R E + PPVL+FVQS ER+KELY
Sbjct: 335 PVRIIVHGRRSANTHVKQRLIFCGNELGKVVAMRNLVREGITPPVLVFVQSVERSKELYE 394
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ +G+ ++H+ ++ QRE V FR GK WVL+ T+++ARG+DFK V VIN+DFP
Sbjct: 395 EIRAEGLHMAIMHAKMTVEQREETVLQFRLGKIWVLVTTELLARGIDFKNVGTVINFDFP 454
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 455 ATVDSYIHRV 464
>gi|393247738|gb|EJD55245.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 565
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS-TDLS-KFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+G K++I L K + D + + DI+ISTPLRL ++ + ++
Sbjct: 209 LAHQIYNECLKLAQGRKWRIVLFSKATASTLADKNVRDKIDIVISTPLRLVACLKSETLE 268
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V +L+LDEAD+L + L + + ACS+ + ++FSATLP VEEL+ +M +
Sbjct: 269 LDNVRHLILDEADRLLDT-EFLGQVQEIYSACSHKELQTAVFSATLPAAVEELSMQMMRN 327
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q LV+ SE KLL L Q + PP+LIFV ++ RA L
Sbjct: 328 PIRIVVGLKDTPLPLIAQSLVYVSSESSKLLTLLQHLGQPYTPPLLIFVGTQPRAGSLAE 387
Query: 179 ELAF-DGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL D +H+ +S+ +RE+AV R G++WV+I T+V+ARGMDFKGV VINYDF
Sbjct: 388 ELVLHDVPNVDCLHAGMSKKEREDAVARMRNGESWVMITTEVMARGMDFKGVRGVINYDF 447
Query: 238 PDSGAAYIHRI 248
P S +YIHRI
Sbjct: 448 PQSVQSYIHRI 458
>gi|401426831|ref|XP_003877899.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494146|emb|CBZ29443.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 584
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ V+ +K + DI I+TP R+ + +K +DLS
Sbjct: 223 LAQQIEREAFFLMKGQRWK-------FVQHGQTTK-NKDIFIATPGRIVSLLEQKLLDLS 274
Query: 61 RVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + L ID ++ AC+ V SLF+ATL + VE ARS+M D
Sbjct: 275 NVQYLVFDEGDRLWDSRTDFLAVIDRILTACTRTDKVVSLFTATLSEKVEAAARSVMGAD 334
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + + + +KQ+LVF G+E GK++A+R E + PPVL+FVQS ER+KELY
Sbjct: 335 PVRIIVHGRRSVNTHVKQRLVFCGNELGKVVAMRNLVREGITPPVLVFVQSVERSKELYE 394
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ +G+ ++H+ ++ QRE V FR GK WVL+ T+++ARG+DFK V VIN+DFP
Sbjct: 395 EIRAEGLHMAIMHAKMTVEQREETVLQFRLGKIWVLVTTELLARGIDFKNVGTVINFDFP 454
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 455 ATVDSYIHRV 464
>gi|223997020|ref|XP_002288183.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975291|gb|EED93619.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 409
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 159/269 (59%), Gaps = 23/269 (8%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKE----LVRSTDLSKFSCDILISTPLRLRLAIRR 54
L++Q RE +L+ NKF L+ K +++ K D LISTPLRL I R
Sbjct: 98 LSSQLHREILRLSVNTPNKFHCALLSKSNAGLAIQNQLGGKSGLDCLISTPLRLVECIER 157
Query: 55 KKIDLSRVEYLVLDEADKL------FEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFV 108
+ L+ V +VLDEAD+ + L+ ID ++ + + R+LFSATL V
Sbjct: 158 G-MRLNGVRLIVLDEADRQNAQSGSSQSRTFLQQIDSILSHLPS-TATRALFSATLGPSV 215
Query: 109 EELARSIMHDAVRVIVG---------RKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
L+ SI+ + + G ASE I+Q+L F G EEGKLLA+RQ AE +
Sbjct: 216 RHLSESILRSPIDITTGIHAGIGGNSAAGGASEHIQQELKFVGREEGKLLAIRQLVAEGI 275
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
PPVLIF+QSKERA+ L+GEL +DGIR VIH+ S + RE +V FR G+TWVLI TD+
Sbjct: 276 TPPVLIFLQSKERAQALFGELLYDGIRVDVIHAGRSASAREASVAKFRKGETWVLICTDL 335
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ARG+DFK VN VINYD P G Y+HRI
Sbjct: 336 VARGVDFKAVNLVINYDLPMEGVTYVHRI 364
>gi|390604084|gb|EIN13475.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 592
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 155/252 (61%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF---SCDILISTPLRLRLAIRRKKI 57
LA Q EC KLA+G K++I L K +T + K + DI+ISTPLRL A+ I
Sbjct: 222 LAHQIHNECLKLAQGRKWRIILFSKATA-ATLVDKNVRDNVDIIISTPLRLVSALGSNSI 280
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
LS V +LVLDEAD+L + L + ++ AC++PS +++FSATLP VE++A +M
Sbjct: 281 SLSNVRHLVLDEADRLLDA-EFLPQLQDIIAACTHPSCQKAVFSATLPAGVEKIAMGMMK 339
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
D VRV+VG K+T I+Q LV+ + KL L PPV+IF ++ RA L
Sbjct: 340 DPVRVVVGLKDTPLPHIQQSLVYVADDASKLPTLVAHLNRPYTPPVIIFTSTQPRASSLA 399
Query: 178 GELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L I R G +H+ +++ QRE+ + +AG+ WVL+ T+V+ARGMDF+GV V+NYD
Sbjct: 400 ENLVLYSIPRVGCLHAGMTKKQREDTIRGVKAGEVWVLVCTEVMARGMDFRGVREVVNYD 459
Query: 237 FPDSGAAYIHRI 248
FP S +Y+HRI
Sbjct: 460 FPASVQSYVHRI 471
>gi|159479390|ref|XP_001697776.1| hypothetical protein CHLREDRAFT_176386 [Chlamydomonas reinhardtii]
gi|158274144|gb|EDO99928.1| predicted protein [Chlamydomonas reinhardtii]
Length = 555
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 72 KLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTAS 131
K G +D ++ A +P + R+LFSATLP+ VE+LARS+ +R+ VG KN A+
Sbjct: 272 KATAAGTDFSKVDALLAAAQHPDVSRALFSATLPERVEDLARSVQQQPLRITVGMKNAAT 331
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVI 190
S+ QKL F G E GKLLALRQ+ A+ L PPVL+FV SKERAK L+ EL +DG+ I
Sbjct: 332 SSVNQKLHFVGREAGKLLALRQALADGGLKPPVLVFVGSKERAKALHRELLYDGVHVDSI 391
Query: 191 HSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ Q R A+D+FRAGKTWVLIATD+I RGMDF G+N VINYDFP + A Y+HRI
Sbjct: 392 TAGQPQAARNAAIDNFRAGKTWVLIATDLIGRGMDFVGINTVINYDFPRTTADYVHRI 449
>gi|389742318|gb|EIM83505.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 584
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 158/251 (62%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS-TDLS-KFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KLA+ K++I L K + D + + D++ISTPLRL +++ ++
Sbjct: 227 LAHQIHNECLKLAQKRKWRIVLFSKATAATLADKNVRSKVDVIISTPLRLVTSLQSGDLE 286
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V +LVLDEAD++ + L + V+ AC++P I +++FSATLP E++A +++D
Sbjct: 287 LNNVRHLVLDEADRMLD-AEFLDQVQEVIAACTHPKIQKAVFSATLPASAEKVAMGMLND 345
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV+VG K+T I Q L + + KL L ++ NPP+LIFV S+ RA L
Sbjct: 346 PIRVVVGLKDTPLPLISQSLTYVADDASKLPTLLTYLSQPYNPPLLIFVSSQPRASSLAE 405
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL + V+H+ +S+ +RE+AV R G++WV++ T+V+ARGMDFKGV V+NYDF
Sbjct: 406 ELVISSVPNVDVLHAGMSRKEREDAVGRMRKGESWVMVTTEVMARGMDFKGVREVVNYDF 465
Query: 238 PDSGAAYIHRI 248
P S +Y+HR+
Sbjct: 466 PRSVQSYVHRV 476
>gi|336374435|gb|EGO02772.1| hypothetical protein SERLA73DRAFT_176143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387328|gb|EGO28473.1| hypothetical protein SERLADRAFT_458915 [Serpula lacrymans var.
lacrymans S7.9]
Length = 564
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 155/251 (61%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC KL G K+++ L K + + DI++STPLRL +++ ++
Sbjct: 212 LAHQIHNECLKLTVGRKWRVVLFSKATASTLADKTVRDKVDIIVSTPLRLVASLQAGNLN 271
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V +LVLDEAD+L + L + +V C+ P+I +++FSATLP VE LA ++ +
Sbjct: 272 LNNVRHLVLDEADRLLDP-EFLSQVQEIVAVCTYPNIQKAVFSATLPAGVEALAMGMLRN 330
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV+VG K+T I Q L + + KL +L FA+ NPPVL+F ++ RA L
Sbjct: 331 PIRVVVGLKDTPLPLIAQTLTYVADDSSKLPSLLTYFAQPYNPPVLVFTSTQTRATSLAE 390
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +G+ +H+ ++ +RE+A+ R G++W++I+T+V+ARGMDFKG+ VINYDF
Sbjct: 391 ELVMNGLPNVDCLHAGMTNKEREDAISRMRKGESWIMISTEVMARGMDFKGIREVINYDF 450
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 451 PTSVQSYVHRI 461
>gi|170084181|ref|XP_001873314.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650866|gb|EDR15106.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 450
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 156/251 (62%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC +L +G K++I L K S + DI+ISTPLRL + + K++
Sbjct: 110 LAHQIHNECLRLTQGRKWRIVLFSKATANSLANKAVRDKVDIIISTPLRLISSYQDGKLE 169
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V++LVLDEAD+L + L + +V ACS I +++FSATLP +E+LA ++ +
Sbjct: 170 LNSVQHLVLDEADRLLD-REFLPQVQEIVGACSFSGIQKAVFSATLPAEIEKLALEMLRN 228
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV+VG K+T I Q L + + KL +L ++ NPPVL+F S+ RA L
Sbjct: 229 PIRVVVGLKDTPLPLISQSLTYVADDPSKLPSLLAYLSQPYNPPVLVFTSSQPRATSLAE 288
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL +GI +H+ L++ +RE+ + R G++WVL++T+V+ARGMDF+GV VINYDF
Sbjct: 289 ELVLNGISNVDCLHAGLTRKEREDTISRMRQGQSWVLVSTEVLARGMDFQGVREVINYDF 348
Query: 238 PDSGAAYIHRI 248
P + +Y+HRI
Sbjct: 349 PTTVQSYVHRI 359
>gi|393218769|gb|EJD04257.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 573
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 155/251 (61%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS--TDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC K+A+G K+++ L+ K + + DI++STPLRL +++R ++
Sbjct: 207 LAHQIHNECMKIAQGRKWKMVLLSKATASTLADKAVRVKVDIIVSTPLRLVDSMQRCNLE 266
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L V++LVLDEAD+L + L V+ AC ++ +++FSATLP E++A + +
Sbjct: 267 LDNVQHLVLDEADRLLD-SEFLSQTQEVMNACMRENVQKAVFSATLPAGAEKIAMGALRN 325
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IVG K+T SI QKLV+ E KL L Q ++ +PP++IF ++ RA L
Sbjct: 326 PVRIIVGLKDTPLPSITQKLVYVADESSKLPTLLQYLSQPYSPPIIIFTSTQPRASSLAE 385
Query: 179 ELAFDGIR-AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L + ++ +H+ +S +R++A R G +WV+I TDV+ARGMDFKGV VIN+DF
Sbjct: 386 QLVLNSVQNVDCLHAGMSMKERQDAASRMRKGDSWVMICTDVMARGMDFKGVQGVINFDF 445
Query: 238 PDSGAAYIHRI 248
P S +YIHRI
Sbjct: 446 PRSVQSYIHRI 456
>gi|134113761|ref|XP_774465.1| hypothetical protein CNBG1110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819324|sp|P0CR05.1|ROK1_CRYNB RecName: Full=ATP-dependent RNA helicase ROK1
gi|50257103|gb|EAL19818.1| hypothetical protein CNBG1110 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 620
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS +RA+ELY L DGI+ +H ++T+R+ A+ DFR
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFR 469
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 470 VGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510
>gi|321260827|ref|XP_003195133.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461606|gb|ADV23346.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 617
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 144/221 (65%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L++ +Y++LDE+D+L + L ++P++ A
Sbjct: 288 SGNPEGLGIDVLVATPERLHHLIDSRRISLAQTKYVILDESDRLLS-SDFLPQVEPILSA 346
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
C+NP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 347 CTNPTVQKCFLSATMPAGAEALAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 406
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS ERA+ELY L DGI+ +H ++T+R+ A++DFR
Sbjct: 407 LALRNLISSGQLPYPSLIFVQSIERAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIEDFR 466
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 467 MGTVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 507
>gi|405121664|gb|AFR96432.1| ATP-dependent RNA helicase ROK1 [Cryptococcus neoformans var.
grubii H99]
Length = 618
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 289 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 347
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 348 CSNPAVQKCFLSATMPAGAEALAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 407
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS +RA+ELY L DGI+ +H ++T+R+ A+ DFR
Sbjct: 408 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFR 467
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 468 VGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 508
>gi|58269832|ref|XP_572072.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819323|sp|P0CR04.1|ROK1_CRYNJ RecName: Full=ATP-dependent RNA helicase ROK1
gi|57228308|gb|AAW44765.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 620
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS +RA+ELY L DGI+ +H ++T+R+ A+ DFR
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFR 469
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 470 VGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510
>gi|340059592|emb|CCC53981.1| putative RNA helicase, fragment, partial [Trypanosoma vivax Y486]
Length = 370
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LVR ++ + DI ++TP R+ + +K + L
Sbjct: 23 LAEQIEREAFLLMKGQRWK-------LVRHGQSTR-NKDIFVTTPGRVATMLEKKLVSLD 74
Query: 61 RVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DEAD+L++ + L+ +D V+ AC+ V +LF+ATL +E +ARS+M D
Sbjct: 75 MVQYLVFDEADRLWDSTTDNLQVVDAVLTACTLKEKVVALFTATLSAKIESIARSVMSPD 134
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + A+ ++KQ+LVF G+E GK++A+R E + PPVL+FVQS ER KELY
Sbjct: 135 VVRIIVAGRTMANRNVKQELVFCGNELGKIVAMRNLVREGITPPVLVFVQSIERTKELYE 194
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S ++ +RE + FR GK WVL+ T++++RG+DFK V VIN+D P
Sbjct: 195 EIHCQGLHIAVMNSKMTHEEREATMIRFRLGKIWVLVTTELLSRGIDFKNVGTVINFDIP 254
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 255 VTVESYIHRI 264
>gi|401883440|gb|EJT47648.1| hypothetical protein A1Q1_03425 [Trichosporon asahii var. asahii
CBS 2479]
Length = 576
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 151/251 (60%), Gaps = 9/251 (3%)
Query: 1 LATQTTRECKKLAKGNKF-QIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDL 59
L+ T + + A G KF +I+ + D LI+TP RL + +
Sbjct: 215 LSKATQKAVCESAPGPKFGKIESDDDDEEEEEREGNLGIDFLIATPERLHHLLDEGLV-- 272
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
YLVLDE D+L + + P+V AC+ + + L SAT+P EELAR+ + DA
Sbjct: 273 --TRYLVLDECDRLLSA-DFKPQVVPIVDACTG-DVQKCLLSATMPAGAEELARAWLKDA 328
Query: 120 -VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAKELY 177
VRV+VG K++A ++ Q L++ GSE+GKLLALR AE P P LIFVQS ERA EL
Sbjct: 329 GVRVVVGLKDSAVTTVDQSLLYTGSEQGKLLALRNLIAEGGLPYPSLIFVQSVERADELA 388
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+L DG+RA +H S+T+R+ A+ DFR G WVL+ T+V+ARGMDF+GV V+NYDF
Sbjct: 389 RQLVLDGVRAEAVHGGKSKTRRDQAIADFRTGAAWVLVVTEVLARGMDFRGVKVVVNYDF 448
Query: 238 PDSGAAYIHRI 248
P + +YIHRI
Sbjct: 449 PQTVPSYIHRI 459
>gi|407410868|gb|EKF33151.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi marinkellei]
Length = 546
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ I +K IDL
Sbjct: 210 LAEQIEREAFFLMKGQRWK-------LVQHGQSTR-NKDIFITTPRRVFTMIEKKLIDLG 261
Query: 61 RVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
+YLV DE D+L++ + L+ +D ++ AC+ V +LF+ATL +E +AR++M D
Sbjct: 262 NTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVVALFTATLSSKIEGVARTVMSPD 321
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R+IV + +A++ I Q+LVF G+E GK++ +R E +NPPVLIFVQS ER KELY
Sbjct: 322 PIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLREGINPPVLIFVQSIERTKELYD 381
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S ++ +R+ + +FR GK WV+I TD+++RG+DFK + VIN+DFP
Sbjct: 382 EIRCQGLNIAVMNSKMTHEERDETIMNFRLGKLWVIITTDLLSRGIDFKNIGTVINFDFP 441
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 442 ITIESYIHRI 451
>gi|294946828|ref|XP_002785180.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
gi|239898755|gb|EER16976.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
Length = 515
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/260 (44%), Positives = 162/260 (62%), Gaps = 21/260 (8%)
Query: 1 LATQTTRECKKLAKG--NKFQIKLMKKE--LVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA QT RE +L + KF+IKL+ K ++ S+ L + DI + TPL L A+R K
Sbjct: 235 LAVQTVREADRLIQACTKKFRIKLLDKNTNVLLSSVLVRL--DIGVQTPLGLVQALREGK 292
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP------------SIVRSLFSATL 104
+DL+ + +V DE DKL ++G ID ++K + +I SLFSAT+
Sbjct: 293 VDLNNTQVIVFDEGDKLLDLG-FQDQIDEIIKYANEEDERRRTAGSALGTIQLSLFSATM 351
Query: 105 PDFVEELARSIMHDAV-RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPP 162
PD V L S+M RV VG++ +A++ ++Q+L+F G+EEGKL+ALR+ A + PP
Sbjct: 352 PDNVVHLMMSVMDPPPNRVWVGQQGSAAKDVQQRLLFCGNEEGKLVALRRMIANGEVKPP 411
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
L FVQSK RA+EL EL FDG+ IHSD+S+ QR+ +++FR GK W+LI TDV+AR
Sbjct: 412 CLAFVQSKARAQELTKELMFDGVFVACIHSDMSRKQRDTCIENFRLGKIWILICTDVMAR 471
Query: 223 GMDFKGVNCVINYDFPDSGA 242
G+DFKGV VIN D P + A
Sbjct: 472 GVDFKGVAQVINIDIPRASA 491
>gi|342186417|emb|CCC95903.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 552
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ + + +DL
Sbjct: 212 LAEQIEREAFFLMKGERWK-------LVQHGQTTR-NKDIFITTPGRVFSMLEKGLVDLG 263
Query: 61 RVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + LK +D V+ AC V +LF+ATL +E +ARS+M D
Sbjct: 264 NVQYLVFDEGDRLWDSTTDNLKIVDAVLTACVCSEKVVALFTATLSKKIEAMARSVMSPD 323
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + AS+ ++Q+LVF G+E GK++A+R E + PPVLIFVQS ER+KELY
Sbjct: 324 PVRIIVAGRANASKDVRQELVFCGNELGKIVAMRNILREGITPPVLIFVQSIERSKELYE 383
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S +S +R+ + +FR GK WVL+ T++++RG+DFK V VIN+D P
Sbjct: 384 EIHCQGLHIAVMNSRMSHEERDETMMNFRLGKIWVLVTTELLSRGIDFKNVGTVINFDIP 443
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 444 TTVESYIHRV 453
>gi|353237317|emb|CCA69293.1| probable ROK1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 561
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 154/253 (60%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRS-TDLS-KFSCDILISTPLRLRLAIRRKKID 58
LA Q E +KLA+G K++I L K + D S + DI+ISTP+RL +I+ I
Sbjct: 206 LAGQIYNEAQKLAQGRKWRIVLFSKATAATLKDPSVRGKVDIIISTPMRLVASIQAGDIQ 265
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L RV+ L+LDEAD+L + ++ +V CSNP+ +++FSATLP E+ ++M+D
Sbjct: 266 LDRVQVLILDEADRLLDP-EFASQVEEIVGCCSNPACQKAVFSATLPAKAEKTVLNMMND 324
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN--PPVLIFVQSKERAKEL 176
+RV+VG K+T +IKQ LV+ E KL L Q L PPV++F ++ RA L
Sbjct: 325 PIRVVVGLKDTPLPNIKQSLVYVAQPESKLPTLIQYLTSPLGYKPPVIVFTSTQARATSL 384
Query: 177 YGELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
EL G+ A +H+ L++ QRE V G+ WVLI TDV+ARGMDF GV VIN+
Sbjct: 385 LSELLLAGVMNAEALHAGLTKHQREECVKRILKGEVWVLITTDVLARGMDFGGVCGVINF 444
Query: 236 DFPDSGAAYIHRI 248
D+P+S +Y+HRI
Sbjct: 445 DWPESVQSYVHRI 457
>gi|426201672|gb|EKV51595.1| hypothetical protein AGABI2DRAFT_189828 [Agaricus bisporus var.
bisporus H97]
Length = 566
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 150/251 (59%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q E KL +G ++ + K + + + D++ISTPLRL ++R ID
Sbjct: 202 LAYQIYNESLKLTQGRNWRTIMFTKATANTLAVKEVRDKVDVIISTPLRLVASLRAGIID 261
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L + +LVLDEAD+LF+ ++ C++P + +++FSATLP E++A ++ D
Sbjct: 262 LQNIRHLVLDEADRLFD-KEFFSQTQEIITYCNHPGVQKAVFSATLPAGAEKIAMEMLQD 320
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q L + ++ KL +L FA NPP+LIF ++ RA L
Sbjct: 321 PIRIVVGLKDTPLPLIHQSLTYVADDQSKLPSLLGHFARPYNPPILIFTSTQIRASSLAE 380
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL GI +H+ ++Q +R+ +V R GK+W+++ T+V+ARGMDFKGV VINYDF
Sbjct: 381 ELVMSGIPNVDCLHAGMTQKERDESVGRMRQGKSWIMVTTEVMARGMDFKGVREVINYDF 440
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 441 PTSVQSYVHRI 451
>gi|409083276|gb|EKM83633.1| hypothetical protein AGABI1DRAFT_110276 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 566
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 150/251 (59%), Gaps = 4/251 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q E KL +G ++ + K + + + D++ISTPLRL ++R ID
Sbjct: 202 LAYQIYNESLKLTQGRNWRTIMFTKATANTLAVKEVRDKVDVIISTPLRLVASLRAGIID 261
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L + +LVLDEAD+LF+ ++ C++P + +++FSATLP E++A ++ D
Sbjct: 262 LQNIRHLVLDEADRLFD-KEFFSQTQEIITYCNHPGVQKAVFSATLPAGAEKIAMEMLQD 320
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R++VG K+T I Q L + ++ KL +L FA NPP+LIF ++ RA L
Sbjct: 321 PIRIVVGLKDTPLPLIHQSLTYVADDQSKLPSLLGHFARPYNPPILIFTSTQIRASSLAE 380
Query: 179 ELAFDGI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
EL GI +H+ ++Q +R+ +V R GK+W+++ T+V+ARGMDFKGV VINYDF
Sbjct: 381 ELVMSGIPNVDCLHAGMTQKERDESVGRMRQGKSWIMVTTEVMARGMDFKGVREVINYDF 440
Query: 238 PDSGAAYIHRI 248
P S +Y+HRI
Sbjct: 441 PTSVQSYVHRI 451
>gi|407850251|gb|EKG04705.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi]
Length = 553
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ I +K IDL
Sbjct: 210 LAEQIEREAFFLMKGQRWK-------LVQHGQSTR-NKDIFITTPRRVFTMIEKKLIDLG 261
Query: 61 RVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
+YLV DE D+L++ + L+ +D ++ AC+ V +LF+ATL +E +AR++M D
Sbjct: 262 NTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVVALFTATLSSKIEGIARTVMSPD 321
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R+IV + +A++ I Q+LVF G+E GK++ +R E ++PPVLIFVQS ER KELY
Sbjct: 322 PIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLREGISPPVLIFVQSIERTKELYD 381
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S +S +R+ + +FR GK WV+I TD+++RG+DFK + VIN+DFP
Sbjct: 382 EIRCQGLNIAVMNSKMSHEERDETIMNFRLGKLWVIITTDLLSRGIDFKNIGTVINFDFP 441
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 442 ITIESYIHRI 451
>gi|74025742|ref|XP_829437.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834823|gb|EAN80325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 556
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 164/250 (65%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ + RK +DLS
Sbjct: 213 LAEQIEREAFFLLKGKRWK-------LVQHGQTTR-NKDIFITTPGRVSTLLERKLVDLS 264
Query: 61 RVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
++YLV DE D+L++ + L+ +D V+ AC+ V +LF+ATL + +E ARS+M D
Sbjct: 265 NIQYLVFDEGDRLWDSSTDNLRVMDIVLTACTYKEKVVALFTATLSEKIEAAARSVMGPD 324
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + A++++KQ+LVF G+E GK++A+R E + PPVLIFVQS ER KEL+
Sbjct: 325 PVRIIVSGRAKANKNVKQELVFCGNELGKVVAIRNIVREGVTPPVLIFVQSIERTKELHE 384
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+R ++++ ++ +R+ + +FR GK WVL+ T++++RG+DFK V VIN+D P
Sbjct: 385 EIQCQGLRIAIMNAKMTHEERDETMMNFRLGKIWVLVTTELLSRGIDFKNVGTVINFDIP 444
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 445 TTVESYIHRV 454
>gi|261335430|emb|CBH18424.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 556
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 164/250 (65%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ + RK +DLS
Sbjct: 213 LAEQIEREAFFLLKGKRWK-------LVQHGQTTR-NKDIFITTPGRVSTLLERKLVDLS 264
Query: 61 RVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
++YLV DE D+L++ + L+ +D V+ AC+ V +LF+ATL + +E ARS+M D
Sbjct: 265 NIQYLVFDEGDRLWDSSTDNLRVMDIVLTACTYKEKVVALFTATLSEKIEAAARSVMGPD 324
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + A++++KQ+LVF G+E GK++A+R E + PPVLIFVQS ER KEL+
Sbjct: 325 PVRIIVSGRAKANKNVKQELVFCGNELGKVVAIRNIVREGVTPPVLIFVQSIERTKELHE 384
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+R ++++ ++ +R+ + +FR GK WVL+ T++++RG+DFK V VIN+D P
Sbjct: 385 EIQCQGLRIAIMNAKMTHEERDETMMNFRLGKIWVLVTTELLSRGIDFKNVGTVINFDIP 444
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 445 TTVESYIHRV 454
>gi|148226210|ref|NP_001079530.1| Probable ATP-dependent RNA helicase DDX52-like [Xenopus laevis]
gi|27882196|gb|AAH44017.1| MGC53409 protein [Xenopus laevis]
Length = 686
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 172/326 (52%), Gaps = 78/326 (23%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+QT RE KL+ G F+I ++ K V + S DIL++TP RL +++
Sbjct: 252 LASQTQRELVKLSDGIGFRIHVIDKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPP 311
Query: 57 -IDLSRVEYLVLDEADKLFEVG-----------------NLLK----------------- 81
IDLS VE+L++DE+DKLFE G +LLK
Sbjct: 312 GIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCK 371
Query: 82 -HIDPVV--------------------------KACSNPSIVRSLFSATLPDFVE--ELA 112
H+D VV K + ++++ F+ + FV+ E A
Sbjct: 372 LHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRNLIKKGFTPPVLAFVQSVERA 431
Query: 113 RSIMH----------DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP 162
+ + H + V V VG +N+A E+++Q L+F GSE GKLLA+R + PP
Sbjct: 432 KELFHVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRNLIKKGFTPP 491
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
VL FVQS ERAKEL+ EL ++GI VIH++ +Q QR+N + FR GK WVLI T ++AR
Sbjct: 492 VLAFVQSVERAKELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLAR 551
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+DFKGVN VINYDFP S YIHRI
Sbjct: 552 GIDFKGVNMVINYDFPTSAVEYIHRI 577
>gi|154342955|ref|XP_001567423.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064755|emb|CAM42860.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 584
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 162/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ V+ +K + DI I+TP R+ L + +K +DLS
Sbjct: 223 LAQQIEREAFFLTKGQRWR-------FVQHGQTTK-NKDIFIATPGRIALLLEQKLLDLS 274
Query: 61 RVEYLVLDEADKLFEV-GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + L ID ++ AC+ V SLF+ATL + VE ARS+M D
Sbjct: 275 NVQYLVFDEGDRLWDSRTDFLIVIDKILTACTRTDKVVSLFTATLSEKVEAAARSVMGTD 334
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + AS ++Q+LVF G+E GK++A+R E + PPVL+FVQS ER+KELY
Sbjct: 335 PVRIIVHGRRFASTHVRQRLVFCGNELGKVVAMRNLVREGITPPVLVFVQSVERSKELYE 394
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ +G+ ++H+ ++ QRE V FR GK WVL+ T+++ARG+DFK V VIN+DFP
Sbjct: 395 EIRAEGLHMAIMHAKMTVEQREETVLQFRLGKIWVLVTTELLARGIDFKNVGTVINFDFP 454
Query: 239 DSGAAYIHRI 248
+ +YIHR+
Sbjct: 455 ATVDSYIHRV 464
>gi|71420983|ref|XP_811671.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70876358|gb|EAN89820.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 553
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LV+ ++ + DI I+TP R+ I +K IDL
Sbjct: 210 LAEQIEREAFFLMKGQRWK-------LVQHGQSTR-NKDIFITTPRRVFTMIEKKLIDLG 261
Query: 61 RVEYLVLDEADKLFEVG-NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
+YLV DE D+L++ + L+ +D ++ AC+ V +LF+ATL +E +AR++M D
Sbjct: 262 NTQYLVFDEVDRLWDSATDNLQVVDSILTACTFEEKVVALFTATLSSKIEGIARTVMSPD 321
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+R+IV + +A++ I Q+LVF G+E GK++ +R E ++PPVLIFVQS ER KELY
Sbjct: 322 PIRIIVSGRVSANKKISQELVFCGNELGKIVEIRNLLREGISPPVLIFVQSIERTKELYD 381
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S ++ +R+ + +FR GK WV+I TD+++RG+DFK + VIN+DFP
Sbjct: 382 EIRCQGLNIAVMNSKMNHEERDETIMNFRLGKLWVIITTDLLSRGIDFKNIGTVINFDFP 441
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 442 ITIESYIHRI 451
>gi|340059591|emb|CCC53980.1| putative ATP-dependent DEAD/H RNA helicase, fragment, partial
[Trypanosoma vivax Y486]
Length = 504
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q RE L KG +++ LVR ++ + DI ++TP R+ + + +K + L
Sbjct: 208 LAEQIEREVFLLMKGQRWK-------LVRHGQSTR-NKDIFVTTPGRVAVMLEKKLVSLD 259
Query: 61 RVEYLVLDEADKLFE-VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH-D 118
V+YLV DE D+L++ + L+ +D V+ AC+ V +LF+ATL +E +ARS+M D
Sbjct: 260 MVQYLVFDEGDRLWDSTTDNLQVVDVVLTACTLKEKVVALFTATLSAKIESIARSVMSPD 319
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+IV + A+ ++KQ+LVF G+E GK++A+R E + PPVL+FVQS ER KELY
Sbjct: 320 VVRIIVAGRTMANRNVKQELVFCGNELGKIVAMRNLVREGVTPPVLVFVQSIERTKELYE 379
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
E+ G+ V++S ++ +RE + FR GK WVL+ T++++RG+DFK V VIN+D P
Sbjct: 380 EIHCQGLHIAVMNSKMTHEEREATMIRFRLGKIWVLVTTELLSRGIDFKNVGTVINFDIP 439
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 440 VTVESYIHRI 449
>gi|270003649|gb|EFA00097.1| hypothetical protein TcasGA2_TC002912 [Tribolium castaneum]
Length = 557
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 153/255 (60%), Gaps = 32/255 (12%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM---KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA QT REC +L++G F + ++ K L++ S DILI+TP R+ +++ +
Sbjct: 196 LAKQTQRECIRLSEGKGFHVHVISKINKALIQYGPNSSQKFDILITTPNRVCFLLKQDQA 255
Query: 57 -IDLSRVEYLVLDEADKLFEVGN--LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
+ L+ +++LV+DEADKLFE GN + +D ++ AC+N ++FSAT V +
Sbjct: 256 ALSLANIKWLVIDEADKLFETGNRGFREQLDQILNACTNKEKKVAMFSATYTPMVAKWCV 315
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
M VR+ VG+++ LV G L PPVL+FVQSK+RA
Sbjct: 316 HNMKGLVRITVGQRD---------LVKKG----------------LTPPVLVFVQSKDRA 350
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++L+ EL +DGI IH+D +Q QR+N V FR G+ WVLI T+++ARG+DFKGVN VI
Sbjct: 351 QQLFNELIYDGINVDAIHADRTQLQRDNTVRSFREGRIWVLICTELMARGIDFKGVNLVI 410
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S +Y+HR+
Sbjct: 411 NYDFPPSAISYVHRV 425
>gi|344255681|gb|EGW11785.1| putative ATP-dependent RNA helicase DDX52 [Cricetulus griseus]
Length = 507
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 142/215 (66%), Gaps = 15/215 (6%)
Query: 38 CDILISTPLRLRLAIRRKK--IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNP 93
DIL++TP RL +++ IDL+ VE+LV+DE+DKLFE G + + AC++
Sbjct: 95 SDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSH 154
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+ R++FSAT VE+ + + + V V +G +N+A E+++Q+L+F GSE GKLLA+R+
Sbjct: 155 KVKRAMFSATFAYDVEQWCKLNLDNVVTVSIGARNSAVETVEQELLFVGSETGKLLAMRE 214
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+S+ ERAKEL+ EL ++GI VIH++ +Q QR+N V FRAGK WV
Sbjct: 215 LVKKSI-----------ERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWV 263
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LI T ++ARG+DFKGVN VINYDFP S YIHRI
Sbjct: 264 LICTALLARGIDFKGVNLVINYDFPTSSVEYIHRI 298
>gi|452825003|gb|EME32002.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 496
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 152/252 (60%), Gaps = 10/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDL 59
+ QT R + +A Q LM R+T ++ + DI+++TP +R K+DL
Sbjct: 175 MVLQTERVVRNVAHNLSIQSCSLMS---TRATSSNQLTFDIIVATPYSFLNELREGKVDL 231
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
S + +V DEADK+FEV L+ ID ++ C + + + LFSATLPD +E ++RS + D
Sbjct: 232 SGLSDIVFDEADKMFEV-QFLEQIDEILSYCPSALVGKHLFSATLPDAIETMSRSFIDDP 290
Query: 120 VRVIVGRKN-----TASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
VRVIVGR + + ++I Q+L F G+E GK AL + F + PVLIFVQ+K+R +
Sbjct: 291 VRVIVGRGSGNGSFSCIDTIDQQLKFTGNESGKRFALEELFINGVAAPVLIFVQNKKRVE 350
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L+ L+ I IHSD SQ R AV+DF+ G VL+ +D++ RGMDF+ + VIN
Sbjct: 351 DLFRLLSRMKISTAFIHSDCSQEHRSRAVEDFKRGFVTVLVTSDLLCRGMDFRCIQTVIN 410
Query: 235 YDFPDSGAAYIH 246
YDFP S + YIH
Sbjct: 411 YDFPTSLSTYIH 422
>gi|209881795|ref|XP_002142335.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209557941|gb|EEA07986.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 498
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 152/254 (59%), Gaps = 7/254 (2%)
Query: 1 LATQTTRECKKL--AKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q RE K L + K++ + + ++ + + DI +STP R + ++
Sbjct: 186 LAQQIVREVKVLLDTRAKKYRCRYICGKVKKEQESRTKRLDIAVSTPFRFAEICKSGIMN 245
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVV---KACSNPSIVRSLFSATLPDFVEELARSI 115
L ++VLDE DKL ++G ID ++ SN + FSATLP+ V++LA SI
Sbjct: 246 LKECSFIVLDEVDKLLDMG-FSPQIDEIIAHSNVISNGKVQVVAFSATLPNNVKDLAESI 304
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M + V VG + AS++IKQ+L+ E GKL + RQ + +N PVL+F SKE A+
Sbjct: 305 MKYPIEVTVGHRLAASKTIKQELICVTKESGKLESFRQLIKQGRINLPVLLFTNSKENAQ 364
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L+ ++ FD + +IHSD+++T+R+N V FR G+ WVLI TD+IARG+DFK V VIN
Sbjct: 365 KLFSKIVFDNLLVDMIHSDMAKTKRDNIVKKFRTGQIWVLICTDLIARGVDFKNVATVIN 424
Query: 235 YDFPDSGAAYIHRI 248
YDFP + YIHRI
Sbjct: 425 YDFPQTSTIYIHRI 438
>gi|90076664|dbj|BAE88012.1| unnamed protein product [Macaca fascicularis]
Length = 423
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 133/199 (66%), Gaps = 11/199 (5%)
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVE 109
+R++KI+ R +KLFE G + + AC++ + R++FSAT VE
Sbjct: 135 LRKEKINFLR---------NKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVE 185
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
+ + + + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS
Sbjct: 186 QWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQS 245
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
ERAKEL+ EL ++GI VIH++ +Q QR+N V FRAG+ WVLI T ++ARG+DFKGV
Sbjct: 246 IERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGRIWVLICTALLARGIDFKGV 305
Query: 230 NCVINYDFPDSGAAYIHRI 248
N VINYDFP S YIHRI
Sbjct: 306 NLVINYDFPTSSVEYIHRI 324
>gi|395846002|ref|XP_003795705.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Otolemur
garnettii]
Length = 572
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 148/255 (58%), Gaps = 34/255 (13%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKVSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 306 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G + + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVITVSIGAR---------------------------YLIGFNPPVLVFVQSIERA 398
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 399 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 458
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 459 NYDFPTSSVEYIHRI 473
>gi|357017323|gb|AET50690.1| hypothetical protein [Eimeria tenella]
Length = 639
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 151/256 (58%), Gaps = 15/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF-SCDILISTPLRLRLAIRRKKIDL 59
LA Q+ R ++L +G F K +S S++ + D + +TPL L ++ K++ L
Sbjct: 208 LARQSLRTFQRLTEGTGF-----KAAFPQSHSGSRYGAADAVFATPLSLLTLLKEKRLSL 262
Query: 60 SRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
S ++LVLDEAD+L + G LL I I LFSATLP V LA
Sbjct: 263 SDCQHLVLDEADRLLDSGFSPQVDALLFEIKSATATAKRLHIC--LFSATLPPSVVLLAE 320
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKER 172
SI + AV V VGR + A+ I+Q+LVF +E GKL AL+ E L PP LIFV+++ER
Sbjct: 321 SITYGAVHVTVGRASAAAPQIEQELVFCSTEAGKLWALKNLRVERKLIPPCLIFVETQER 380
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A EL E+ +G+ ++H+ S+ QR+ VD FR GK W LI TD++ARG+DFKGV V
Sbjct: 381 ASELLREMITEGMTVDLLHAAKSKQQRDATVDAFRTGKIWFLICTDLVARGIDFKGVALV 440
Query: 233 INYDFPDSGAAYIHRI 248
IN+D P S + YIHRI
Sbjct: 441 INFDLPISTSVYIHRI 456
>gi|444720987|gb|ELW61747.1| Synergin gamma [Tupaia chinensis]
Length = 2242
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 117/160 (73%)
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
AC++ + R++FSAT VE+ + + + + V +G +N+A E+++Q+L+F GSE GKL
Sbjct: 340 ACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKL 399
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
LA+RQ + +PPVL+FVQS ERAKEL+ EL ++GI VIH++ +Q QR+N V FRA
Sbjct: 400 LAMRQLVKKGFDPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRA 459
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK WVLI T ++ARG+DFKGVN VINYDFP S YIHRI
Sbjct: 460 GKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRI 499
>gi|397581350|gb|EJK51897.1| hypothetical protein THAOC_28888, partial [Thalassiosira oceanica]
Length = 316
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 121/182 (66%), Gaps = 16/182 (8%)
Query: 78 NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNT-------- 129
L+ ID V+ + P+ R+LFSATL V L+ SI+ R GR++
Sbjct: 51 TFLQQIDAVLSSLP-PTATRALFSATLGPSVRHLSESIL----RGPPGRRHGGAVGGDSA 105
Query: 130 ---ASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIR 186
ASE I+Q+L F G EEGKLLA+RQ AE ++PPVL+FVQSKERA+ L+GEL +DGIR
Sbjct: 106 ASGASEHIRQELKFVGREEGKLLAIRQLVAEGIDPPVLVFVQSKERAQALFGELLYDGIR 165
Query: 187 AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
V+H+ S QRE +V FR G+TWVLI TD++ARG+DFKGVN VINYD P G Y+H
Sbjct: 166 VDVVHAGRSHGQRELSVQRFRKGETWVLICTDLVARGVDFKGVNLVINYDLPPEGVTYVH 225
Query: 247 RI 248
RI
Sbjct: 226 RI 227
>gi|422293301|gb|EKU20601.1| putative dead box rna helicase [Nannochloropsis gaditana CCMP526]
Length = 300
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 146/238 (61%), Gaps = 29/238 (12%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSK---FSC-DILISTPLRLRLAIRRKK 56
LA+Q E ++LA G F++ ++ K L + D + FS D+L++TP+RL A+R +
Sbjct: 50 LASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGR 109
Query: 57 IDLSRVEYLVLDEADKLFEVG----------------NLLKHIDPVVKACSNPSIVRSLF 100
+DL RV +VLDEADKLFE+G + L +D ++ AC+ P + R+LF
Sbjct: 110 VDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALF 169
Query: 101 SATLPDFVEELARSIMHDAVRVIVG----RKN-----TASESIKQKLVFAGSEEGKLLAL 151
SATLP +++LA S++ D V V VG R N ES+ Q+LVF G EEGKLLAL
Sbjct: 170 SATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLAL 229
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
RQ + + PP+L+F+++KERA+ELY EL +D +R V+H+D S QR ++ RAG
Sbjct: 230 RQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAG 287
>gi|324507437|gb|ADY43153.1| ATP-dependent RNA helicase DDX52 [Ascaris suum]
Length = 593
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 9/218 (4%)
Query: 38 CDILISTPLRLRLAIRRKKID--LSRVEYLVLDEADKLFEVGN-----LLKHIDPVVKAC 90
DI++STP R+ I D + +L++DE+D+LFE + V +AC
Sbjct: 247 ADIIVSTPKRMEFFIENNPSDSTFKWLRWLIVDESDRLFETTEGDSRCFRTQLAKVYQAC 306
Query: 91 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
+ R FSAT VEE ++ +H+ V VG +N+A +S++Q+LVFAGSE GK++A
Sbjct: 307 NGKYTHRGFFSATFSYEVEEWCKTNLHNVAMVCVGARNSAVDSVEQQLVFAGSEHGKVVA 366
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRA 208
+R F + PP LIFVQSK+RA++L+ E+ AF+ I +I S+ S+ +R++A+ FR
Sbjct: 367 IRSLFQQGFEPPALIFVQSKDRARQLFSEMSAFEPPIPVALISSERSEKERDSAIAKFRE 426
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
G WVLI T+++ RG+DF+GVN V+N+D P S +YIH
Sbjct: 427 GSIWVLICTELLGRGLDFRGVNMVVNFDLPTSVVSYIH 464
>gi|219111847|ref|XP_002177675.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410560|gb|EEC50489.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 483
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 160/291 (54%), Gaps = 45/291 (15%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK------KELVRSTDLSKFSCDILISTPLRLRLAIRR 54
LA Q RE ++L G + + +++ + K D+L+STPLRL AI
Sbjct: 98 LAAQLHREIERLGIGKPGGLSSLLLSRSNASQVIGGSAGGKSGLDMLVSTPLRLVDAIE- 156
Query: 55 KKIDLSRVEYLVLDEADKLF-------------EVG--------------------NLLK 81
K + L+ V +VLDEAD+L E G + L
Sbjct: 157 KGLRLNSVRIVVLDEADRLLDATDGKRARKPKGEAGTESIVEDEEEEEEEEDDSSQSFLA 216
Query: 82 HIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIV---GRKNTASESIKQKL 138
+D V+ + + R+LFSAT+ V LA SI+ + + V + G A+ I+Q+L
Sbjct: 217 QMDIVLSEVPS-TATRALFSATVTPTVRFLAESILRNPLDVTIANSGSVGGANTDIEQEL 275
Query: 139 VFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQT 197
+F G E+GKLLA+RQ L+PP +IF++SK RA+ L+GEL +DGI VIH+ S++
Sbjct: 276 MFVGKEQGKLLAIRQLVQRGQLHPPAIIFLESKNRAQALFGELLYDGIHVDVIHAGRSKS 335
Query: 198 QRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
RENAV FR G TWVLI TD++ARG+DF+ VN VINYD P SG Y+HRI
Sbjct: 336 ARENAVAKFRRGDTWVLICTDLVARGVDFRAVNMVINYDLPSSGIDYVHRI 386
>gi|134055621|emb|CAK37267.1| unnamed protein product [Aspergillus niger]
Length = 697
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 165/281 (58%), Gaps = 34/281 (12%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSK--FSCDILISTPLRL--RLAIRRKK 56
LA+Q E +KLA G +I LMKK + +++ DIL++TPL L L+ R K
Sbjct: 283 LASQIVNEGRKLALGTGVKITLMKKGMPKNSKGKAPVTKSDILVTTPLLLVNALSANRTK 342
Query: 57 --IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
L V +VLDEAD L + + +D + ++C++P + SL+SAT+ VE+LA+S
Sbjct: 343 PLATLPLVRNVVLDEADVLLDPLFRDQTLD-IWRSCTHPELRASLWSATMGSNVEDLAKS 401
Query: 115 IM------------HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----SFAES 158
+ + +R++VG K++A +IK KLV+A +E+GKLL LRQ + A S
Sbjct: 402 TIKERKDTLSETKSYPLLRLVVGLKDSAIPNIKHKLVYAATEQGKLLGLRQLLHPAAASS 461
Query: 159 ----LNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFR 207
L PP LIF Q+ RA L+ EL +D R V+HS+LS QR + FR
Sbjct: 462 TDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSRIAVLHSELSDGQRSEIMKQFR 521
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ W+L+ TD++ARG+DF+G+N V+NYD P+S A Y+HR+
Sbjct: 522 KGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRV 562
>gi|145506703|ref|XP_001439312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406496|emb|CAK71915.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 151/252 (59%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKF-QIKLMKKELVRSTDLSKFSCDILISTPLR-LRLAIRRKKID 58
LA Q +E K K K QI+ M +E ++ + DILIS+PL+ L+L K +D
Sbjct: 178 LADQLYKEFNKFNKELKIKQIQEMNRE-KQAFKQAWNHIDILISSPLKFLKL---HKVVD 233
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS VEY+++DEADK FE+G LL + +++ + I FSATLP+ VE++ R ++ D
Sbjct: 234 LSTVEYVIMDEADKYFELG-LLAQVKQLLRILESLQITYMFFSATLPEPVEDIYRELLID 292
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERAKELY 177
+++++G +N I Q+L + +E GK+ ++ E + PPVL+FVQSK RA+ L
Sbjct: 293 PIKIMIGGRNHVLSRIDQQLRYVSNEYGKIQEIKNLINEGQMTPPVLVFVQSKTRAEALM 352
Query: 178 GEL-AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
E+ IR IH D+ R+ V+ F G W+LI TD++ARG+DFK V VINYD
Sbjct: 353 YEIEQLKVIRVNCIHGDMESKTRQEIVEQFHKGTIWMLICTDMMARGIDFKDVQLVINYD 412
Query: 237 FPDSGAAYIHRI 248
FP S Y+HR+
Sbjct: 413 FPQSMITYVHRV 424
>gi|296423228|ref|XP_002841157.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637391|emb|CAZ85348.1| unnamed protein product [Tuber melanosporum]
Length = 515
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 50/281 (17%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFSCDILISTPLRLRLAIR----- 53
LA+Q E KKLA G ++ L+KK E V+S ++++STP L ++
Sbjct: 119 LASQIVNEGKKLALGTGVRVALLKKGGEGVKS--------EVVVSTPAVLLHSLEASTSC 170
Query: 54 -----------RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS--------NPS 94
KK D S V L+LDEAD L +DP+ +A + +P
Sbjct: 171 SPSPGEGDEMEEKKTDWSSVSRLILDEADIL---------LDPLFRAQTLGIWTQLQSPH 221
Query: 95 IVRSLFSATLPDFVEELARSIMHDA----VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
+ SLFSAT+ E L + + + +R+IVG K+T ++I QKL + +E GKLLA
Sbjct: 222 LRTSLFSATISSSTETLCQQHIPPSSSPTIRLIVGLKDTTIQNITQKLTYTATEPGKLLA 281
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFD---GIRAGVIHSDLSQTQRENAVDDFR 207
LRQ F S +PP LIFVQ+ RA+ L E+ +D R V+H++LS R + F
Sbjct: 282 LRQLFTTSFHPPALIFVQTIPRARALVAEILYDLPTPGRIAVLHAELSDVARAEVMGRFL 341
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
AG+ WVL+ TD++ARGMDF+GV CVINYD P S A YIHR+
Sbjct: 342 AGEIWVLVTTDLLARGMDFRGVRCVINYDIPTSVAGYIHRV 382
>gi|323337542|gb|EGA78787.1| Rok1p [Saccharomyces cerevisiae Vin13]
Length = 310
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
+FSAT+P VEE+A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E
Sbjct: 1 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 60
Query: 159 -LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
PP++IF++S RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI T
Sbjct: 61 EFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICT 120
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIH 246
DV+ARG+DFKGVN VINYD P S AY+H
Sbjct: 121 DVLARGIDFKGVNLVINYDVPGSSQAYVH 149
>gi|67619527|ref|XP_667652.1| dead box RNA helicase [Cryptosporidium hominis TU502]
gi|54658801|gb|EAL37417.1| dead box RNA helicase [Cryptosporidium hominis]
Length = 480
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 7/254 (2%)
Query: 1 LATQTTRECKKL--AKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q RE K + G K++ + + ++ ++ + + DI +STP RL R I+
Sbjct: 169 LAQQIVREIKIILDIHGKKYRCRYISGKIDKAQESNTKRLDIAVSTPYRLADICRNNIIN 228
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS---IVRSLFSATLPDFVEELARSI 115
L +VLDE DKL ++G ID ++ + P + + FSATLP V LA SI
Sbjct: 229 LQGCSMIVLDEVDKLLDMG-FAPQIDEILSHSNIPKGGKVQIAAFSATLPQIVINLADSI 287
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M V+V +G + AS +I Q+LV ++ K+ +LRQ + + P L+F SK+ A+
Sbjct: 288 MKSPVKVTLGHRLAASSTIIQELVCVTKDDAKIESLRQLIKQGKIMLPTLVFTNSKDDAQ 347
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ +L +D + IHSD+ + +R+N + FR GK W+LI TD++ARG+DFK V+CV+N
Sbjct: 348 RLFKKLMYDNLIVEAIHSDMPKVKRDNIIQRFRTGKIWILICTDLMARGVDFKNVSCVVN 407
Query: 235 YDFPDSGAAYIHRI 248
YDFP S + YIHR+
Sbjct: 408 YDFPHSPSNYIHRV 421
>gi|66475700|ref|XP_627666.1| Rok1p, eIF4A-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|32398898|emb|CAD98363.1| dead box RNA helicase, possible [Cryptosporidium parvum]
gi|46229099|gb|EAK89948.1| Rok1p, eIF4A-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|323508863|dbj|BAJ77324.1| cgd6_3210 [Cryptosporidium parvum]
Length = 480
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 149/254 (58%), Gaps = 7/254 (2%)
Query: 1 LATQTTRECKKL--AKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q RE K + G K++ + + ++ ++ + + DI +STP RL R I+
Sbjct: 169 LAQQIVREIKIILDIHGKKYRCRYISGKIDKAQESNTKRLDIAVSTPYRLADICRNNIIN 228
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS---IVRSLFSATLPDFVEELARSI 115
L +VLDE DKL ++G ID ++ + P + + FSATLP V LA SI
Sbjct: 229 LQGCSMIVLDEVDKLLDMG-FAPQIDEILSHSNIPKGGKVQIAAFSATLPQIVINLADSI 287
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M V+V +G + AS +I Q+LV ++ K+ +LRQ + + P L+F SK+ A+
Sbjct: 288 MKSPVKVTLGHRLAASSTIIQELVCVTKDDAKIESLRQLIKQGKIMLPTLVFTNSKDDAQ 347
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ +L +D + IHSD+ + +R+N + FR GK W+LI TD++ARG+DFK V+CV+N
Sbjct: 348 RLFKKLMYDNLIVEAIHSDMPKVKRDNIIQRFRTGKIWILICTDLMARGVDFKNVSCVVN 407
Query: 235 YDFPDSGAAYIHRI 248
YDFP S + YIHR+
Sbjct: 408 YDFPHSPSNYIHRV 421
>gi|390363099|ref|XP_003730297.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Strongylocentrotus purpuratus]
Length = 448
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 98/122 (80%)
Query: 127 KNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIR 186
+NTA++ I+Q+L+F GSE GKLLA+R F++ PPVL+FVQSKERAKEL+ EL +DG
Sbjct: 246 RNTANDRIEQELIFVGSESGKLLAVRNLFSKGFTPPVLVFVQSKERAKELFQELIYDGYN 305
Query: 187 AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
VIH+D +QTQR+N V FRAGK WVLIAT+++ RG+DFKGVN VINYDFP S +YIH
Sbjct: 306 VDVIHADKTQTQRDNIVKGFRAGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVSYIH 365
Query: 247 RI 248
RI
Sbjct: 366 RI 367
>gi|242774133|ref|XP_002478380.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218721999|gb|EED21417.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 748
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 154/259 (59%), Gaps = 50/259 (19%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
+S +L+K DIL++TPL L A+ K + L V +LVLDEAD L +D
Sbjct: 365 KSGNLTK--SDILVTTPLALVNALTVKDTEETESLPSVRHLVLDEADVL---------LD 413
Query: 85 PVVK--------ACSNPSIVRSLFSATLPDFVEELARSIM---HDAV--------RVIVG 125
P+ + +C+NP + S +SAT+ +EEL +SI+ H+++ R+++G
Sbjct: 414 PLFREQTLAIWTSCNNPDLGISFYSATMGSSIEELTKSILESRHESLNAKKRPLLRLVIG 473
Query: 126 RKNTASESIKQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKERAKEL 176
K+TA +I+ KL++A +E+GKLL LRQ + L PP L+F Q+ RA L
Sbjct: 474 LKDTAVPNIQHKLIYAATEQGKLLGLRQLLHPTAAIAPNEVRLRPPFLVFTQTITRAVAL 533
Query: 177 YGELAFD-GIRAG------VIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+ EL +D I AG V+HSDLS+T+R + DFR G+ W++I TD++ARG+DF+G+
Sbjct: 534 HSELLYDIPIEAGGSSRIAVLHSDLSETRRSEIMKDFRKGEIWIIITTDLLARGVDFRGI 593
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P S A Y+HR+
Sbjct: 594 NGVVNYDIPTSSAGYVHRV 612
>gi|399218830|emb|CCF75717.1| unnamed protein product [Babesia microti strain RI]
Length = 486
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 140/221 (63%), Gaps = 4/221 (1%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 88
++T+L++ DI ISTPL L +R I+L+ + L++DEADKLF++G ID ++
Sbjct: 224 KNTELTRL--DICISTPLTLIKLLRDGNINLNYCKILIMDEADKLFDLG-FESQIDEILS 280
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
++ R LFSAT+ V +L SIM D +++VG +N A +I Q+L+ +E GKL
Sbjct: 281 FLPKENVQRLLFSATMHGKVRKLVNSIMIDYYKILVGTENAACTNIAQELICVTNEAGKL 340
Query: 149 LALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LRQ F + L PPVL+F+ S+E+ +++ +LA DGI+ + + LS+ +R+ + R
Sbjct: 341 YTLRQMFLDGKLPPPVLVFISSREKVDKVFKQLANDGIQVAKLSAMLSKKERDATIQALR 400
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ TD++ARG+DF V+CV+N+D P YIHR+
Sbjct: 401 TGMIWILLCTDILARGVDFPQVSCVVNFDIPTKTQVYIHRV 441
>gi|224015907|ref|XP_002297597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967714|gb|EED86099.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 216
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVG---------RKNTASESIKQKLVFAGSEEGK 147
R+LFSATL V L+ SI+ + + G ASE I+Q+L F G EEGK
Sbjct: 11 RALFSATLGPSVRHLSESILRSPIDITTGIHAGIGGNSAAGGASEHIQQELKFVGREEGK 70
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LLA+RQ AE + PPVLIF+QSKERA+ L+GEL +DGIR VIH+ S + RE +V FR
Sbjct: 71 LLAIRQLVAEGITPPVLIFLQSKERAQALFGELLYDGIRVDVIHAGRSASAREASVAKFR 130
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+TWVLI TD++ARG+DFK VN VINYD P G Y+HRI
Sbjct: 131 KGETWVLICTDLVARGVDFKAVNLVINYDLPMEGVTYVHRI 171
>gi|407925460|gb|EKG18471.1| Helicase [Macrophomina phaseolina MS6]
Length = 773
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 149/248 (60%), Gaps = 38/248 (15%)
Query: 38 CDILISTPLRLRLAIRR---KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
DIL+STPL L A++ K +S V+YLVLDEAD L + + +D + AC++P
Sbjct: 379 SDILVSTPLTLLHALQGSAGKTGTISSVKYLVLDEADVLLDPLFRQQTLD-IWNACTSPL 437
Query: 95 IVRSLFSATLPDFVEELARSIMH---------------DAVRVIVGRKNTASESIKQKLV 139
+ SL+SAT+ VEELA++ + + +R+IVG K++A +I +L
Sbjct: 438 LRVSLWSATMGSSVEELAKNTITSRWTSIESTTGITRPNLIRLIVGLKDSAVPNIHHQLT 497
Query: 140 FAGSEEGKLLALRQ------------SFAESLNPPVLIFVQSKERAKELYGELAFD---- 183
+A +E+GKLLA+RQ S A SL PP LIF Q+ RA+ LY EL +D
Sbjct: 498 YAATEQGKLLAVRQLLHPTGTTKSSQSTAPSLRPPFLIFTQTIPRAQALYAELQYDIPPE 557
Query: 184 ---GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
R V+HS LS + R+N + FR G+ W+LI TD++ARG+DF+G+N V+NYD P S
Sbjct: 558 AGGSSRIAVLHSSLSSSLRDNVMARFRKGEVWILITTDLLARGVDFRGINGVVNYDVPTS 617
Query: 241 GAAYIHRI 248
GAAY+HR+
Sbjct: 618 GAAYVHRV 625
>gi|453085928|gb|EMF13970.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 706
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 169/310 (54%), Gaps = 71/310 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---------------ELVRSTDLSKFS-----CDI 40
LA+Q ECKKLA+ ++ ++K E +S LS S DI
Sbjct: 273 LASQIVNECKKLAQNTGLRVTQVRKGMKLGLPTAAPGSDSENEQSDQLSIQSGTVVKSDI 332
Query: 41 LISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS----- 91
L+STP L ++ D LS V YL+LDEAD L +DP+ + +
Sbjct: 333 LVSTPGVLASMLQDAHRDSCSALSEVRYLILDEADVL---------LDPLFREQTLSIWN 383
Query: 92 ---NPSIVRSLFSATLPDFVEELARSIMHDA--------------VRVIVGRKNTASESI 134
++ SL+SAT+ +EELARS+M + +R++VG K++A +I
Sbjct: 384 RLPRKNLRASLWSATMGSNIEELARSVMRERWIRLNQDETAEAPLIRLVVGLKDSAVPNI 443
Query: 135 KQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKERAKELYGELAFD-- 183
+ KLV+A SE+GKL+ LR + A+S L PP L+F Q+ ERA L+ EL +D
Sbjct: 444 EHKLVYAASEQGKLMGLRNLLHPATTSADSGPPLLPPFLVFTQTIERAIALHSELLYDIP 503
Query: 184 ----GI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
GI R V+HSDLS T R++ + FR G+ WVLI TD+++RG+DF+GVN V+NYD P
Sbjct: 504 AEAGGISRIAVLHSDLSDTARDSVMTKFRKGEVWVLITTDLLSRGVDFRGVNGVVNYDIP 563
Query: 239 DSGAAYIHRI 248
S AAYIHR+
Sbjct: 564 TSSAAYIHRV 573
>gi|170593001|ref|XP_001901253.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591320|gb|EDP29933.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 1209
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 141/226 (62%), Gaps = 8/226 (3%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN-----LLKHID 84
S +LS S +I+ISTP +L A+++ KI + + +LV+DE+D+LF+ +
Sbjct: 900 SQNLS-VSSNIVISTPNKLVYALKKNKILSNGLNWLVVDESDRLFDTTEGDDRCFRSQLA 958
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 144
+ + CS + R+ FSAT VE+ + ++D + +G +N+A S+KQ+LVFAGSE
Sbjct: 959 KIYQICSESPVRRAFFSATFSYEVEDWCKKNLNDVAMICIGSRNSAVNSVKQELVFAGSE 1018
Query: 145 EGKLLALRQSFAESLNPPVLIFVQSKERAKELYG--ELAFDGIRAGVIHSDLSQTQRENA 202
GK+ +L+ F S PP LIFVQSK RAK+L E I +I S+ ++ +RE+A
Sbjct: 1019 HGKVTSLKALFQNSFKPPALIFVQSKLRAKQLVPIIESLQPPIPVKMISSEKTEAERESA 1078
Query: 203 VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +FR G+ W+L+ TD++ RG+D GVN V+N+D P S +YIHRI
Sbjct: 1079 IAEFRNGQIWILVCTDLMGRGLDLSGVNLVVNFDLPTSVISYIHRI 1124
>gi|146161201|ref|XP_976799.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146830|gb|EAR86204.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 668
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 7/216 (3%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS-IVR 97
DILI+TPL+ R+ + ++EY+V DEAD+ FE N+ + +++ +
Sbjct: 332 DILITTPLKFIKMNRKSHTEFDKLEYIVFDEADRYFEF-NIAGQMKRILETFQEKQGLTY 390
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+ VEEL ++I+ D +++ +G KN SI+Q L + SE GKL+ L+
Sbjct: 391 LLFSATIQHPVEELVKNIIVDPLKLQIGGKNNVLASIEQSLSYCQSEYGKLVELKNIINN 450
Query: 158 S-LNPPVLIFVQSKERAKELYGELAFDGIRAGV----IHSDLSQTQRENAVDDFRAGKTW 212
NPPVLIFVQSKER +EL + + + I SD + +RE ++DFR GK W
Sbjct: 451 GEFNPPVLIFVQSKERGEELLSMIKSSCVNTPIKIEKIDSDKQKEEREEVIEDFRTGKLW 510
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LI TD++ARG+DFKGVN VINYDFP + YIHR+
Sbjct: 511 ALICTDLMARGIDFKGVNLVINYDFPTTMINYIHRV 546
>gi|67517343|ref|XP_658548.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|74681451|sp|Q5BET6.1|ROK1_EMENI RecName: Full=ATP-dependent RNA helicase rok1
gi|40746817|gb|EAA65973.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|259488768|tpe|CBF88477.1| TPA: ATP-dependent RNA helicase rok1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BET6] [Aspergillus
nidulans FGSC A4]
Length = 742
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 166/311 (53%), Gaps = 64/311 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTD-- 32
LA+Q E +KLA G ++ LMKK + R+ +
Sbjct: 290 LASQIVNEGRKLALGTGVKVTLMKKGMRVVERENEDEDVLDESNSESSESESDERTPNNK 349
Query: 33 ----LSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
+ DIL+STPL+L A+ K L V LVLDEAD L + + +D
Sbjct: 350 NKGPVPITKSDILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD 409
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTASE 132
+ ++C++P + SL+SAT+ +E++A++ + + +R++VG K++A
Sbjct: 410 -IWRSCTHPELRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIP 468
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD- 183
+IK KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 469 NIKHKLVYAATEQGKLLGLRQLIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDI 528
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HSDLS TQR + + FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 529 PPEAGGSARIAVLHSDLSDTQRSDIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 588
Query: 238 PDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 589 PNSPAVYVHRV 599
>gi|398412466|ref|XP_003857556.1| hypothetical protein MYCGRDRAFT_65543 [Zymoseptoria tritici IPO323]
gi|339477441|gb|EGP92532.1| hypothetical protein MYCGRDRAFT_65543 [Zymoseptoria tritici IPO323]
Length = 701
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 172/309 (55%), Gaps = 70/309 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRST---DLSKFS-----------CDILIST 44
LA Q E +KLAK ++ ++K +L +S+ D S+ + DIL+ST
Sbjct: 267 LAGQIANEGRKLAKDTGIKVTQVRKGMKLPKSSNKDDESELAVESGTNEIVVKSDILVST 326
Query: 45 PLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS--------N 92
P L ++ + LS V YLV+DEAD L +DP+ + S
Sbjct: 327 PGTLATIVKEAQEHDGEVLSDVRYLVMDEADVL---------LDPLFREQSLAIWNALLR 377
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA-----------------VRVIVGRKNTASESIK 135
P + SL+SAT+ +EELAR+++++ +R++VG K++A +I+
Sbjct: 378 PDLRVSLWSATMGSNIEELARTVINERRMRISASLAGECVEAPLIRLVVGLKDSAVPNIQ 437
Query: 136 QKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKERAKELYGELAFD--- 183
+LV+A SE+GKL+ LRQ + AES L PP L+F Q+ ERA L+ EL +D
Sbjct: 438 HRLVYAASEQGKLMGLRQLLHPTTTTAESGPPLLPPFLVFTQTIERAVALHSELLYDIPP 497
Query: 184 ---GI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
GI R V+HSDLS T R++ + FR G+ WVLI TD+++RG+DF+GVN V+NYD P
Sbjct: 498 EAGGISRIAVLHSDLSDTARDSVMTKFRKGEIWVLITTDLLSRGVDFRGVNGVVNYDIPT 557
Query: 240 SGAAYIHRI 248
S AAY+HR+
Sbjct: 558 SSAAYVHRV 566
>gi|393911181|gb|EFO18387.2| hypothetical protein LOAG_10109 [Loa loa]
Length = 542
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 137/219 (62%), Gaps = 7/219 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 91
+ +I+ISTP +L A+++ + + +L++DE+D+LF+ GN + +AC+
Sbjct: 233 NANIVISTPNKLVHALKKNNKISTGLNWLIIDESDRLFDTTEGNDRCFRNQFATIYQACN 292
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
S+ R+ FSAT VE+ + + D + +G +N+A S+KQ+L+FAGSE GK++ L
Sbjct: 293 GNSVCRAFFSATFSYEVEDWCKRNLCDMAMICIGSRNSAVSSVKQELIFAGSEHGKIIGL 352
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYG--ELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
+ F S PP LIFVQSK RAK+L E I +I S+ ++T+RE+A+ +FR+G
Sbjct: 353 KALFQNSFEPPALIFVQSKLRAKQLVPVIESLQPPIPVKMISSEKTETERESAIAEFRSG 412
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
W L+ TD++ RG+D GVN V+N+D P S +YIHRI
Sbjct: 413 HIWALVCTDLMGRGLDLSGVNLVVNFDLPTSIISYIHRI 451
>gi|312087983|ref|XP_003145684.1| hypothetical protein LOAG_10109 [Loa loa]
Length = 537
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 137/219 (62%), Gaps = 7/219 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV--GN---LLKHIDPVVKACS 91
+ +I+ISTP +L A+++ + + +L++DE+D+LF+ GN + +AC+
Sbjct: 228 NANIVISTPNKLVHALKKNNKISTGLNWLIIDESDRLFDTTEGNDRCFRNQFATIYQACN 287
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
S+ R+ FSAT VE+ + + D + +G +N+A S+KQ+L+FAGSE GK++ L
Sbjct: 288 GNSVCRAFFSATFSYEVEDWCKRNLCDMAMICIGSRNSAVSSVKQELIFAGSEHGKIIGL 347
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYG--ELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
+ F S PP LIFVQSK RAK+L E I +I S+ ++T+RE+A+ +FR+G
Sbjct: 348 KALFQNSFEPPALIFVQSKLRAKQLVPVIESLQPPIPVKMISSEKTETERESAIAEFRSG 407
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
W L+ TD++ RG+D GVN V+N+D P S +YIHRI
Sbjct: 408 HIWALVCTDLMGRGLDLSGVNLVVNFDLPTSIISYIHRI 446
>gi|402594445|gb|EJW88371.1| hypothetical protein WUBG_00716 [Wuchereria bancrofti]
Length = 1245
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 138/220 (62%), Gaps = 8/220 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSR-VEYLVLDEADKLFEVGN-----LLKHIDPVVKAC 90
+ +I+ISTP +L A+++ LS + +LV+DE+D+LF+ + + + C
Sbjct: 929 NANIVISTPNKLLYALKKNNKILSNGLNWLVVDESDRLFDTTEGDDRCFRSQLAKIYQVC 988
Query: 91 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
S + R+ FSAT VE+ + ++D + +G +N+A S+KQ+LVFAGSE GK+++
Sbjct: 989 SESPVRRAFFSATFSYEVEDWCKRNLNDVAMICIGSRNSAVNSVKQELVFAGSEHGKVIS 1048
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYG--ELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L+ F S PP LIFVQSK RAK+L E I +I S+ ++ +RE+A+ +FR+
Sbjct: 1049 LKGLFQNSFQPPALIFVQSKLRAKQLVPIIESLQPPIPVKMISSEKTEAERESAIAEFRS 1108
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ W+L+ TD++ RG+D GVN V+N+D P S +YIHRI
Sbjct: 1109 GQIWILVCTDLMGRGLDLSGVNLVVNFDLPTSIISYIHRI 1148
>gi|169767166|ref|XP_001818054.1| ATP-dependent RNA helicase rok1 [Aspergillus oryzae RIB40]
gi|91207747|sp|Q2UQW3.1|ROK1_ASPOR RecName: Full=ATP-dependent RNA helicase rok1
gi|83765909|dbj|BAE56052.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 725
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 64/311 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTDLS 34
LA+Q E +KL G +I LMKK + ++T+
Sbjct: 278 LASQIVNEGRKLVSGTGVKITLMKKGMQVVEREDDDEDVLDEGSSESSESEDDEKTTEKK 337
Query: 35 K------FSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
DIL++TPL+L A+ K L V +VLDEAD L + + +D
Sbjct: 338 SKGKAPVTKSDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD 397
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASE 132
+ +AC++P + SL+SAT+ +E+LA+S + + R++VG K++A
Sbjct: 398 -IWRACTHPELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIP 456
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD- 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 457 NIQHKLVYAATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDI 516
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 517 PPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGIDFRGINGVVNYDI 576
Query: 238 PDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 577 PNSAAVYVHRV 587
>gi|391874035|gb|EIT82990.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 725
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 64/311 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTDLS 34
LA+Q E +KL G +I LMKK + ++T+
Sbjct: 278 LASQIVNEGRKLVSGTGVKITLMKKGMQVVEREDDDEDVLDEGSSESSESEDDEKTTEKK 337
Query: 35 K------FSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
DIL++TPL+L A+ K L V +VLDEAD L + + +D
Sbjct: 338 SKGKAPVTKSDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD 397
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASE 132
+ +AC++P + SL+SAT+ +E+LA+S + + R++VG K++A
Sbjct: 398 -IWRACTHPELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIP 456
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD- 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 457 NIQHKLVYAATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDI 516
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 517 PPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGIDFRGINGVVNYDI 576
Query: 238 PDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 577 PNSAAVYVHRV 587
>gi|449302774|gb|EMC98782.1| hypothetical protein BAUCODRAFT_120082 [Baudoinia compniacensis
UAMH 10762]
Length = 699
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 163/311 (52%), Gaps = 72/311 (23%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFS-----------------CDIL 41
L +Q E +KL +G ++ ++K L+ D + + DIL
Sbjct: 265 LVSQIVNEGRKLTQGTGVRVVQLRKGMRLIARNDSDRGTVAAAADAPSSGVRTIVRADIL 324
Query: 42 ISTPLRLRLAIRRKKI---DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA--------C 90
+STP L +R +I DL V L+LDEAD L +DP+ +
Sbjct: 325 VSTPGLLHAMLRDDEISSADLVNVSSLILDEADVL---------LDPLFREQTLSTWDNL 375
Query: 91 SNPSIVRSLFSATLPDFVEELARSIMH-----------------DAVRVIVGRKNTASES 133
+NP + SL+SAT+ +EEL RS + +RV+VG K++A +
Sbjct: 376 NNPELRVSLWSATMGSNIEELTRSTLERRLKRLREQHGLQVEEAPLIRVVVGLKDSAVSN 435
Query: 134 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGELAFD- 183
++ +LV+A +E+GKL+ALRQ SL PP L+F Q+ ERA L+ EL +D
Sbjct: 436 VQHRLVYAATEQGKLMALRQLLHPTSTSKDIGPSLLPPFLVFTQTIERAIALHSELLYDI 495
Query: 184 -----GI-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
GI R V+H+DLS T R++ + FR G+ WVLI TD+++RG+DF+GVN V+NYD
Sbjct: 496 PAEAGGISRIAVLHADLSDTARDSVMTRFRKGEIWVLITTDLLSRGVDFRGVNGVVNYDI 555
Query: 238 PDSGAAYIHRI 248
P S AAY+HR+
Sbjct: 556 PTSSAAYVHRV 566
>gi|345571134|gb|EGX53949.1| hypothetical protein AOL_s00004g608 [Arthrobotrys oligospora ATCC
24927]
Length = 751
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 143/246 (58%), Gaps = 18/246 (7%)
Query: 20 IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIR--RKKIDLSRVEYLVLDEADKLFEVG 77
I+ + RS +I+++TPL L AI+ +S V ++LDEAD L +
Sbjct: 381 IETTNGSVTRSKKGIAVKSEIMVATPLLLLHAIQLCPDLFPVSNVSRIILDEADVLLD-D 439
Query: 78 NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVG 125
L ++ ++PS+ S +SAT+P E LA ++ VR+I G
Sbjct: 440 LFLSQTTSIISHLTSPSLSFSFWSATMPSNSESLATKLISSHSSVLSSNKTRKLVRLIAG 499
Query: 126 RKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFD-- 183
K+++ +I+Q + + +E GKL ALRQ F+ SL P LIF+Q+ RA+ L+ E+ +D
Sbjct: 500 IKDSSLPTIRQTITYTATERGKLTALRQLFSSSLKTPCLIFLQTIPRAQALHAEIMYDLP 559
Query: 184 -GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGA 242
R V+HS+LS+T R +D FRAG+ WVLI TD+++RG+DF+GVN VINYD P S A
Sbjct: 560 TPNRIAVLHSNLSETARSKVMDSFRAGEIWVLITTDLLSRGVDFRGVNLVINYDIPTSVA 619
Query: 243 AYIHRI 248
+YIHR+
Sbjct: 620 SYIHRV 625
>gi|156040647|ref|XP_001587310.1| hypothetical protein SS1G_12340 [Sclerotinia sclerotiorum 1980]
gi|154696396|gb|EDN96134.1| hypothetical protein SS1G_12340 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 721
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 161/314 (51%), Gaps = 75/314 (23%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSKFS--------------------- 37
LA+Q E KKL+ G +I MKK ++V S D +
Sbjct: 271 LASQIVNEGKKLSIGTGVKILGMKKGMKIVSSADAEEKEQLDDDEDDDESVDGATSSKQP 330
Query: 38 ---CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVK-- 88
DIL++TPL A+ D L V LV DEAD L +DP+ +
Sbjct: 331 LTRTDILVTTPLIFLHALSLGSTDDHAPLPTVRTLVFDEADVL---------LDPLFRDQ 381
Query: 89 ------ACSNPSIVRSLFSATLPDFVEELARSIMH------------DAVRVIVGRKNTA 130
+C NP++ +L+SAT+ +E LA S + + +R++VG K++A
Sbjct: 382 TLGIWNSCINPNLRVTLWSATMGSNIETLASSTIQTRQEKLGLEKHSNLIRLVVGLKDSA 441
Query: 131 SESIKQKLVFAGSEEGKLLALRQSF---------AESLNPPVLIFVQSKERAKELYGELA 181
+I +L++A +E GKL+ALRQ ESL PP L+F Q+ RA L+ EL
Sbjct: 442 IPNITHRLIYAATEPGKLIALRQLLRPTAKTTDGTESLRPPFLVFTQTISRAIALHAELL 501
Query: 182 FD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+D R V+HSDLS + R+ + FR G+ W+LI TD+++RG+DFKG+N V+N
Sbjct: 502 YDIPAEAGGSTRIAVLHSDLSDSVRDQVMTRFRNGEIWILITTDILSRGVDFKGINGVVN 561
Query: 235 YDFPDSGAAYIHRI 248
YD P+SGAAYIHR+
Sbjct: 562 YDVPNSGAAYIHRV 575
>gi|238483997|ref|XP_002373237.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus flavus
NRRL3357]
gi|220701287|gb|EED57625.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus flavus
NRRL3357]
Length = 426
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 143/242 (59%), Gaps = 32/242 (13%)
Query: 38 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 93
DIL++TPL+L A+ K L V +VLDEAD L + + +D + +AC++P
Sbjct: 48 SDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD-IWRACTHP 106
Query: 94 SIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTASESIKQKLVFA 141
+ SL+SAT+ +E+LA+S + + R++VG K++A +I+ KLV+A
Sbjct: 107 ELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQHKLVYA 166
Query: 142 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD-------GIR 186
+E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D R
Sbjct: 167 ATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDIPPEAGGSSR 226
Query: 187 AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD P+S A Y+H
Sbjct: 227 IAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGIDFRGINGVVNYDIPNSAAVYVH 286
Query: 247 RI 248
R+
Sbjct: 287 RV 288
>gi|255957063|ref|XP_002569284.1| Pc21g23170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590995|emb|CAP97214.1| Pc21g23170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 719
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 159/312 (50%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD---------------------------- 32
LA+Q E +KL G +I LM+K + D
Sbjct: 269 LASQIVNEGRKLVAGTGVKITLMRKGMRVGDDSVADVLDENSEESSGSEDEDAENKPTKE 328
Query: 33 ---LSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP 85
+ DIL++TPL L A+ + L V LV+DEAD L + + +D
Sbjct: 329 RANVPVTKSDILVTTPLMLVNALSANRTTTMATLPLVRSLVMDEADVLLDPLFREQTLD- 387
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIM--------------HDAVRVIVGRKNTAS 131
+ KACS+P + L+SAT+ +E+L +S + H +R++VG K++A
Sbjct: 388 IWKACSHPDLRVGLWSATMGSNIEDLTKSTIKERLEDLGQKPSEPHALLRLVVGLKDSAI 447
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I KLV+A +E+GKL+ LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 448 PNIDHKLVYAATEQGKLMGLRQLLRPAAASASDIRLRPPFLIFTQTIPRAVALHSELKYD 507
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + + DFR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 508 IPAEAGGSSRIAVLHSDLSDGQRSDIMRDFRKGEIWILVTTDLLARGVDFRGINGVVNYD 567
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 568 IPNSAAVYVHRV 579
>gi|159131729|gb|EDP56842.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus fumigatus
A1163]
Length = 739
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 164/312 (52%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV------------RSTDLSKFS----------- 37
LA+Q E +KL G +I LMKK + S D + S
Sbjct: 292 LASQIVNEGRKLVHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSDSEQDEPSTTR 351
Query: 38 ----------CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 83
DIL++TPL L L+ R K L V +VLDEAD L + + +
Sbjct: 352 KKKGKAPITKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTL 411
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTAS 131
D + +AC++P + SL+SAT+ +E+LA+S + + +R++VG K++A
Sbjct: 412 D-IWRACTHPELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAI 470
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 PNIEHKLVYAATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYD 530
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 531 IPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYD 590
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 591 IPNSAAVYVHRV 602
>gi|70996480|ref|XP_752995.1| ATP dependent RNA helicase (Rok1) [Aspergillus fumigatus Af293]
gi|74672120|sp|Q4WRH5.1|ROK1_ASPFU RecName: Full=ATP-dependent RNA helicase rok1
gi|66850630|gb|EAL90957.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus fumigatus
Af293]
Length = 739
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 164/312 (52%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV------------RSTDLSKFS----------- 37
LA+Q E +KL G +I LMKK + S D + S
Sbjct: 292 LASQIVNEGRKLVHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSDSEQDEPSTTR 351
Query: 38 ----------CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 83
DIL++TPL L L+ R K L V +VLDEAD L + + +
Sbjct: 352 KKKGKAPITKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTL 411
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTAS 131
D + +AC++P + SL+SAT+ +E+LA+S + + +R++VG K++A
Sbjct: 412 D-IWRACTHPELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAI 470
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 PNIEHKLVYAATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYD 530
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 531 IPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYD 590
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 591 IPNSAAVYVHRV 602
>gi|154320412|ref|XP_001559522.1| hypothetical protein BC1G_01678 [Botryotinia fuckeliana B05.10]
gi|347838811|emb|CCD53383.1| similar to ATP-dependent RNA helicase rok1 [Botryotinia fuckeliana]
Length = 719
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 156/314 (49%), Gaps = 75/314 (23%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTDLS 34
LA+Q E KKL+ G +I MKK + ST
Sbjct: 269 LASQIVNEGKKLSVGTGVKILGMKKGMKIIPSANTEEKDQPDDEEDDDESVEGTTSTSQP 328
Query: 35 KFSCDILISTPL----RLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-- 88
DIL++TPL L L L V LV DEAD L +DP+ +
Sbjct: 329 LTKTDILVTTPLIFLHALSLGSSDSHAPLPTVRTLVFDEADVL---------LDPLFREQ 379
Query: 89 ------ACSNPSIVRSLFSATLPDFVEELARSIMH------------DAVRVIVGRKNTA 130
+C NP + +L+SAT+ +E LA + + + VR++VG K++A
Sbjct: 380 TLGIWNSCINPDLRVTLWSATMGSNIETLASATIQARQEKLGLEKHSNLVRLVVGLKDSA 439
Query: 131 SESIKQKLVFAGSEEGKLLALRQSF---------AESLNPPVLIFVQSKERAKELYGELA 181
+I +L++A +E GKL+ALRQ ESL PP L+F Q+ RA L+ EL
Sbjct: 440 IPNITHRLIYAATEPGKLIALRQLLRPTAKTTDGTESLRPPFLVFTQTIPRAIALHAELL 499
Query: 182 FD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+D R V+HSDLS + R+ + FR G+ W+LI TD+++RG+DFKG+N V+N
Sbjct: 500 YDIPAEAGGSTRIAVLHSDLSDSVRDQVMTRFRNGEIWILITTDILSRGVDFKGINGVVN 559
Query: 235 YDFPDSGAAYIHRI 248
YD P+SGAAYIHR+
Sbjct: 560 YDVPNSGAAYIHRV 573
>gi|255728663|ref|XP_002549257.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
gi|240133573|gb|EER33129.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
Length = 434
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 154/252 (61%), Gaps = 18/252 (7%)
Query: 1 LATQTTRECKKLAKG-NKFQIKLMKKELVRSTDLSKFS-CDILISTPLRLRLAIRRKKID 58
LA Q +L + K ++ L+ K+ + +LSK + DILIS P RL + ++K+D
Sbjct: 164 LANQIYNTLGQLTESIKKVEVLLLTKKSAK--NLSKRTKFDILISAPKRLIDVVDKEKVD 221
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKA-CSNPSIVRSLFSATLPDFVEELARSIMH 117
LS + LVLDEADKLFE G+ D + SNPS+ +L+SAT+P E+ +
Sbjct: 222 LSTINQLVLDEADKLFE-GDFAYQTDEITSHLSSNPSV--ALYSATIP---SEIPID-LQ 274
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +++ V S +++Q LVF +E GK+L +RQ S L+PPVLIF+QS RAK L
Sbjct: 275 DPIKIKVDD----SSNVEQSLVFT-NESGKVLGIRQLVQTSQLHPPVLIFLQSTIRAKAL 329
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +DG++ +IH L+ R+ A+ G T++LI TDVIARG+DFKG+N VIN+D
Sbjct: 330 HRELLYDGLKVDLIHGGLTNQARQEAIQRLLNGDTFILITTDVIARGVDFKGINLVINFD 389
Query: 237 FPDSGAAYIHRI 248
P + YIHRI
Sbjct: 390 VPPNLKTYIHRI 401
>gi|317025646|ref|XP_001389504.2| ATP-dependent RNA helicase rok1 [Aspergillus niger CBS 513.88]
gi|143459016|sp|A2QAB5.2|ROK1_ASPNC RecName: Full=ATP-dependent RNA helicase rok1
Length = 729
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 167/313 (53%), Gaps = 66/313 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK----------------------ELVRSTDLSKFSC 38
LA+Q E +KLA G +I LMKK E + S D K +
Sbjct: 283 LASQIVNEGRKLALGTGVKITLMKKGMRVVERDDEDDSKDVLDEDDSESLGSEDDEKATA 342
Query: 39 ------------DILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKH 82
DIL++TPL L L+ R K L V +VLDEAD L + +
Sbjct: 343 KNSKGKAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQT 402
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTA 130
+D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K++A
Sbjct: 403 LD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSA 461
Query: 131 SESIKQKLVFAGSEEGKLLALRQ----SFAES----LNPPVLIFVQSKERAKELYGELAF 182
+IK KLV+A +E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +
Sbjct: 462 IPNIKHKLVYAATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRY 521
Query: 183 D-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
D R V+HS+LS QR + FR G+ W+L+ TD++ARG+DF+G+N V+NY
Sbjct: 522 DIPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWILVTTDLLARGVDFRGINGVVNY 581
Query: 236 DFPDSGAAYIHRI 248
D P+S A Y+HR+
Sbjct: 582 DIPNSAAVYVHRV 594
>gi|327294956|ref|XP_003232173.1| ATP-dependent RNA helicase ROK1 [Trichophyton rubrum CBS 118892]
gi|326465345|gb|EGD90798.1| ATP-dependent RNA helicase ROK1 [Trichophyton rubrum CBS 118892]
Length = 745
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 164/316 (51%), Gaps = 72/316 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL----VRSTDLSK--------------------- 35
LA+Q T E +KLA G +I M+K + R D +K
Sbjct: 296 LASQITNEGRKLALGTGVKITSMRKGMRVVEERGGDYTKQKDDGSEDGSNSDSDEERPKE 355
Query: 36 --------FSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLL 80
DIL++TPL L A+ ++ + VE L+LDEAD L + L
Sbjct: 356 RAKSLATVTKSDILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVLLDPLFRDQTL 415
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKN 128
K + ++C NP + L+SAT+ +EELA++ + + VR++VG K+
Sbjct: 416 K----IWQSCINPRLRVGLWSATMGSNIEELAKATIRERQKALGLKEESSLVRLVVGLKD 471
Query: 129 TASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGE 179
+A +I KL +A +E+GKLL LRQ S E L PP ++F Q+ RA L+ E
Sbjct: 472 SAIPNISHKLTYAATEQGKLLGLRQLLHPTTATASSGEHLRPPFIVFTQTIPRAVALHSE 531
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + + FR G+ W++I TD+++RG+DF+G+N V
Sbjct: 532 LMYDIPPEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGV 591
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S AAY+HR+
Sbjct: 592 VNYDIPNSAAAYVHRV 607
>gi|303318078|ref|XP_003069041.1| ATP-dependent RNA helicase ROK1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108722|gb|EER26896.1| ATP-dependent RNA helicase ROK1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 729
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 48/259 (18%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 84
+S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L +D
Sbjct: 346 KSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL---------LD 396
Query: 85 P--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
P + +AC++P + L+SAT+ +EEL +S + + +R++V
Sbjct: 397 PLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQGLLGLKDESSLIRLVV 456
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKEL 176
G K+TA +I KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L
Sbjct: 457 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSRSTTHLRPPFLIFTQTIARAIAL 516
Query: 177 YGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+ EL +D R V+HS+LS ++R + + FR G+ WVLI TD++ARG+DF+G+
Sbjct: 517 HSELMYDIPAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGI 576
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P+S A+Y+HR+
Sbjct: 577 NGVVNYDIPNSSASYVHRV 595
>gi|320036789|gb|EFW18727.1| ATP-dependent RNA helicase rok1 [Coccidioides posadasii str.
Silveira]
Length = 730
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 48/259 (18%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 84
+S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L +D
Sbjct: 346 KSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL---------LD 396
Query: 85 P--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
P + +AC++P + L+SAT+ +EEL +S + + +R++V
Sbjct: 397 PLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQGLLGLKDESSLIRLVV 456
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKEL 176
G K+TA +I KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L
Sbjct: 457 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSRSTTHLRPPFLIFTQTIARAIAL 516
Query: 177 YGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+ EL +D R V+HS+LS ++R + + FR G+ WVLI TD++ARG+DF+G+
Sbjct: 517 HSELMYDIPAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGI 576
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P+S A+Y+HR+
Sbjct: 577 NGVVNYDIPNSSASYVHRV 595
>gi|226295091|gb|EEH50511.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides brasiliensis
Pb18]
Length = 821
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 154/260 (59%), Gaps = 34/260 (13%)
Query: 21 KLMKKELVRSTDLSKFSCDILISTPLRLRLAIR-RKKIDLS---RVEYLVLDEADKLFEV 76
++ K + R DL S DIL+STP L ++ KK DL+ V+ L LDEAD L +
Sbjct: 425 EVTKAKQSRGNDLITNS-DILVSTPPLLANSLSGNKKRDLAPLPTVQSLALDEADVLLDP 483
Query: 77 GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
+ +D V +AC+N + L+SAT+ +EEL +S + + VR++V
Sbjct: 484 LFREQTLD-VWRACTNAQLRVGLWSATMGSNIEELVKSTISERQKSLGLGDESFLVRLVV 542
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKERAKE 175
G K+TA +I KLV+A +E+GKLL LRQ +F+ S L PP L+F Q+ RA
Sbjct: 543 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTGAFSASDIHLRPPFLVFTQTISRAVA 602
Query: 176 LYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
L+ EL +D R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G
Sbjct: 603 LHSELKYDIPAEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWILITTDLLSRGVDFRG 662
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+N V+NYD P+S AAYIHR+
Sbjct: 663 INGVVNYDIPNSSAAYIHRV 682
>gi|119494475|ref|XP_001264133.1| ATP dependent RNA helicase (Rok1), putative [Neosartorya fischeri
NRRL 181]
gi|143459065|sp|A1D1E3.1|ROK1_NEOFI RecName: Full=ATP-dependent RNA helicase rok1
gi|119412295|gb|EAW22236.1| ATP dependent RNA helicase (Rok1), putative [Neosartorya fischeri
NRRL 181]
Length = 738
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 163/312 (52%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR---------------------------STDL 33
LA+Q E +KL G +I LMKK + ST
Sbjct: 291 LASQIVNEGRKLVHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSESEQDEPSTTR 350
Query: 34 SK------FSCDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 83
K DIL++TPL L L+ R K L V +VLDEAD L + + +
Sbjct: 351 KKKGKAPVTKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFRDQTL 410
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTAS 131
D + +AC++P + SL+SAT+ +E+LA+S + + +R++VG K++A
Sbjct: 411 D-IWRACTHPELRASLWSATMGSNIEDLAKSTIKERKQAYDRTNSYPLLRLVVGLKDSAI 469
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 470 PNIEHKLVYAATEQGKLLGLRQLLHPAAASASDVRLRPPFLIFTQTIPRAIALHSELRYD 529
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 530 IPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYD 589
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 590 IPNSAAVYVHRV 601
>gi|326473391|gb|EGD97400.1| ATP-dependent RNA helicase ROK1 [Trichophyton tonsurans CBS 112818]
Length = 745
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 72/316 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL----VRSTDLSK--------------------- 35
LA+Q T E +KLA G +I M+K + R D +K
Sbjct: 296 LASQITNEGRKLALGTGVKITSMRKGMRVVEERGGDYTKQEDDGSGDGSNSDSDEERPKE 355
Query: 36 --------FSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLL 80
DIL++TPL L A+ ++ + VE L+LDEAD L + L
Sbjct: 356 RAKSRATVTKSDILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVLLDPLFRDQTL 415
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKN 128
K + ++C NP + L+SAT+ +EELA++ + D +R++VG K+
Sbjct: 416 K----IWQSCVNPRLRVGLWSATMGSNIEELAKATIGDRQKALSLKEESSLIRLVVGLKD 471
Query: 129 TASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGE 179
+A +I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ E
Sbjct: 472 SAIPNISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSE 531
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + + FR G+ W++I TD+++RG+DF+G+N V
Sbjct: 532 LMYDIPPEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGV 591
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S AAY+HR+
Sbjct: 592 VNYDIPNSAAAYVHRV 607
>gi|225677741|gb|EEH16025.1| ATP-dependent RNA helicase rok1 [Paracoccidioides brasiliensis
Pb03]
Length = 754
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 154/260 (59%), Gaps = 34/260 (13%)
Query: 21 KLMKKELVRSTDLSKFSCDILISTPLRLRLAIR-RKKIDLS---RVEYLVLDEADKLFEV 76
++ K + R DL S DIL+STP L ++ KK DL+ V+ L LDEAD L +
Sbjct: 358 EVTKAKQSRGNDLITNS-DILVSTPPLLANSLSGNKKRDLAPLPTVQSLALDEADVLLDP 416
Query: 77 GNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
+ +D V +AC+N + L+SAT+ +EEL +S + + VR++V
Sbjct: 417 LFREQTLD-VWRACTNAQLRVGLWSATMGSNIEELVKSTISERQKSLGLGDESFLVRLVV 475
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQ------SFAES---LNPPVLIFVQSKERAKE 175
G K+TA +I KLV+A +E+GKLL LRQ +F+ S L PP L+F Q+ RA
Sbjct: 476 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTGAFSASDIHLRPPFLVFTQTISRAVA 535
Query: 176 LYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
L+ EL +D R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G
Sbjct: 536 LHSELKYDIPAEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWILITTDLLSRGVDFRG 595
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+N V+NYD P+S AAYIHR+
Sbjct: 596 INGVVNYDIPNSSAAYIHRV 615
>gi|315043372|ref|XP_003171062.1| hypothetical protein MGYG_07060 [Arthroderma gypseum CBS 118893]
gi|311344851|gb|EFR04054.1| hypothetical protein MGYG_07060 [Arthroderma gypseum CBS 118893]
Length = 746
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 163/316 (51%), Gaps = 72/316 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL----VRSTDLSK--------------------- 35
LA+Q E +KLA G +I M+K + R D +K
Sbjct: 298 LASQIANEGRKLALGTGVRITTMRKGMRVVEERGADDTKQEDDASEDESNADSDEERPKE 357
Query: 36 --------FSCDILISTPLRLRLAIR----RKKIDLSRVEYLVLDEADKLFEV---GNLL 80
DIL++TPL+L A+ + + V+ LVLDEAD L + L
Sbjct: 358 RVKSLATVTKSDILVTTPLQLVNALSDNGCKDIASMPLVQSLVLDEADVLLDPLFRDQTL 417
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKN 128
K + ++C NP + L+SAT+ +EELARS + D +R++VG K+
Sbjct: 418 K----IWQSCVNPQLRVGLWSATMGSNIEELARSTIGDRQKSLGLTEEPFLIRLVVGLKD 473
Query: 129 TASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGE 179
+A +I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ E
Sbjct: 474 SAIPNISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSE 533
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + + FR G+ W++I TD+++RG+DF+G+N V
Sbjct: 534 LMYDIPPEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGV 593
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S AAY+HR+
Sbjct: 594 VNYDIPNSAAAYVHRV 609
>gi|350638524|gb|EHA26880.1| hypothetical protein ASPNIDRAFT_46407 [Aspergillus niger ATCC 1015]
Length = 729
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 167/313 (53%), Gaps = 66/313 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL-------------VRSTDLSKFS---------- 37
LA+Q E +KLA G +I LMKK + V D S+ S
Sbjct: 283 LASQIVNEGRKLALGTGVKITLMKKGMRVVERDDEDDSKDVLDEDDSESSGSEDDEKATA 342
Query: 38 -----------CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKH 82
DIL++TPL L L+ R K L V +VLDEAD L + +
Sbjct: 343 KNSKGKAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQT 402
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTA 130
+D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K++A
Sbjct: 403 LD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSA 461
Query: 131 SESIKQKLVFAGSEEGKLLALRQ----SFAES----LNPPVLIFVQSKERAKELYGELAF 182
+IK KLV+A +E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +
Sbjct: 462 IPNIKHKLVYAATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRY 521
Query: 183 D-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
D R V+HS+LS QR + FR G+ W+L+ TD++ARG+DF+G+N V+NY
Sbjct: 522 DIPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWILVTTDLLARGVDFRGINGVVNY 581
Query: 236 DFPDSGAAYIHRI 248
D P+S A Y+HR+
Sbjct: 582 DIPNSAAVYVHRV 594
>gi|119186019|ref|XP_001243616.1| hypothetical protein CIMG_03057 [Coccidioides immitis RS]
gi|118574937|sp|Q1E306.1|ROK1_COCIM RecName: Full=ATP-dependent RNA helicase ROK1
gi|392870324|gb|EAS32118.2| ATP-dependent RNA helicase ROK1 [Coccidioides immitis RS]
Length = 730
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 146/259 (56%), Gaps = 48/259 (18%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 84
+S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L +D
Sbjct: 346 KSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL---------LD 396
Query: 85 P--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
P + +AC++P + L+SAT+ +EEL +S + + +R++V
Sbjct: 397 PLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQELLGLKDESSLIRLVV 456
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKEL 176
G K+TA +I KLV+A +E+GKLL LRQ S L PP LIF Q+ RA L
Sbjct: 457 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSSSTTHLRPPFLIFTQTIARAIAL 516
Query: 177 YGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+ EL +D R V+HS+LS ++R + + FR G+ WVLI TD++ARG+DF+G+
Sbjct: 517 HSELMYDIPAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGI 576
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P+S A+Y+HR+
Sbjct: 577 NGVVNYDIPNSSASYVHRV 595
>gi|358370761|dbj|GAA87371.1| ATP-dependent RNA helicase rok1 [Aspergillus kawachii IFO 4308]
Length = 726
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 166/313 (53%), Gaps = 66/313 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK----------------------ELVRSTDLSKFSC 38
LA+Q E +KLA G +I LMKK E S D K +
Sbjct: 280 LASQIVNEGRKLALGTGVKITLMKKGMRVVERDDEDDSKDLLDENDSESSGSEDDEKATA 339
Query: 39 ------------DILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKH 82
DIL++TPL L L+ R K L V +VLDEAD L + +
Sbjct: 340 KNSKGKAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQT 399
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTA 130
+D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K++A
Sbjct: 400 LD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSA 458
Query: 131 SESIKQKLVFAGSEEGKLLALRQ----SFAES----LNPPVLIFVQSKERAKELYGELAF 182
+IK KLV+A +E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +
Sbjct: 459 IPNIKHKLVYAATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRY 518
Query: 183 D-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
D R V+HS+LS QR + FR G+ W+L+ TD++ARG+DF+G+N V+NY
Sbjct: 519 DIPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWILVTTDLLARGVDFRGINGVVNY 578
Query: 236 DFPDSGAAYIHRI 248
D P+S A Y+HR+
Sbjct: 579 DIPNSAAVYVHRV 591
>gi|121700767|ref|XP_001268648.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus clavatus
NRRL 1]
gi|143458991|sp|A1CNK1.1|ROK1_ASPCL RecName: Full=ATP-dependent RNA helicase rok1
gi|119396791|gb|EAW07222.1| ATP dependent RNA helicase (Rok1), putative [Aspergillus clavatus
NRRL 1]
Length = 738
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 143/250 (57%), Gaps = 48/250 (19%)
Query: 38 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 85
DIL++TPL+L A+ + L V +VLDEAD L +DP
Sbjct: 360 SDILVTTPLQLVNALSTNQTKPMATLPLVRNIVLDEADVL---------LDPLFRDQTLN 410
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 133
+ +AC++P + SL+SAT+ VE+LA+S + + +R++VG K++A +
Sbjct: 411 IWRACTHPELRASLWSATMGSNVEDLAKSTIKERKEAVNQTKSYPLLRLVVGLKDSAIPN 470
Query: 134 IKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD-- 183
I+ KL++A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 IEHKLIYAATEQGKLLGLRQLLHPTAASASDVRLRPPFLIFTQTIPRAVALHSELRYDIP 530
Query: 184 -----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD P
Sbjct: 531 TEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDIP 590
Query: 239 DSGAAYIHRI 248
+S A Y+HR+
Sbjct: 591 NSAAVYVHRV 600
>gi|425780912|gb|EKV18905.1| ATP dependent RNA helicase (Rok1), putative [Penicillium digitatum
PHI26]
gi|425783046|gb|EKV20915.1| ATP dependent RNA helicase (Rok1), putative [Penicillium digitatum
Pd1]
Length = 723
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 67/314 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------------- 27
LA+Q E +KL G +I LM+K +
Sbjct: 271 LASQIVNEGRKLVAGTGVKITLMRKGMRVGDVGAAGANVLEENSEESSGSEDDDTENKPA 330
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHI 83
+ T + DIL++TPL L A+ + L V LV+DEAD L + + +
Sbjct: 331 KQRTSVPVTKSDILVTTPLMLVNALSANRTTTMATLPLVRSLVMDEADVLLDPLFREQTL 390
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM--------------HDAVRVIVGRKNT 129
+ + K+CS+P + L+SAT+ +E+L +S + H +R++VG K++
Sbjct: 391 E-IWKSCSHPDLRVGLWSATMGSNIEDLTKSTIKERLEDLERKPSKPHALLRLVVGLKDS 449
Query: 130 ASESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELA 181
A +I KLV+A +E+GKL+ LRQ + L PP LIF Q+ RA L+ EL
Sbjct: 450 AIPNIDHKLVYAATEQGKLMGLRQLLRPAAASASDVRLRPPFLIFTQTIPRAVALHSELK 509
Query: 182 FD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+D R V+HSDLS QR + + DFR G+ W+L+ TD++ARG+DF+G+N V+N
Sbjct: 510 YDIPAEAGGSSRIAVLHSDLSDGQRSDIMRDFRKGEIWILVTTDLLARGVDFRGINGVVN 569
Query: 235 YDFPDSGAAYIHRI 248
YD P+S A Y+HR+
Sbjct: 570 YDIPNSAAVYVHRV 583
>gi|212531849|ref|XP_002146081.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces marneffei
ATCC 18224]
gi|210071445|gb|EEA25534.1| ATP dependent RNA helicase (Rok1), putative [Talaromyces marneffei
ATCC 18224]
Length = 745
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 147/250 (58%), Gaps = 48/250 (19%)
Query: 38 CDILISTPLRLRLAIRRK----KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TPL L A+ K K L V +LVLDEAD L +DP+ +
Sbjct: 368 SDILVTTPLALVNALSVKDTEEKESLPSVRHLVLDEADVL---------LDPLFREQTLA 418
Query: 89 ---ACSNPSIVRSLFSATLPDFVEELARSIM---HDAV--------RVIVGRKNTASESI 134
+C+N ++ S +SAT+ +EEL +S + H+++ R+++G K++A +I
Sbjct: 419 IWNSCTNTNLGISFWSATMGSSIEELTKSTLESRHESLNAEKRPLLRLVIGLKDSAVPNI 478
Query: 135 KQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKERAKELYGELAFD-G 184
+ KL++A +E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 479 QHKLIYAATEQGKLLGLRQLLHPTAAIAPNEVRLRPPFLVFTQTITRAAALHSELLYDIP 538
Query: 185 IRAG------VIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
I AG V+HSDLS+T+R + FR G+ W++I TD++ARG+DF+G+N V+NYD P
Sbjct: 539 IEAGGSSRIAVLHSDLSETRRSEIMKGFRKGEIWIIITTDLLARGVDFRGINGVVNYDIP 598
Query: 239 DSGAAYIHRI 248
S AAY+HR+
Sbjct: 599 TSSAAYVHRV 608
>gi|302655511|ref|XP_003019542.1| hypothetical protein TRV_06416 [Trichophyton verrucosum HKI 0517]
gi|291183274|gb|EFE38897.1| hypothetical protein TRV_06416 [Trichophyton verrucosum HKI 0517]
Length = 745
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 72/316 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL----VRSTDLSK--------------------- 35
LA+Q T E +KLA G +I M+K + R D +K
Sbjct: 296 LASQITNEGRKLALGTGVKITSMRKGMRVVEERGGDYTKQEDDDSEDGSNSDSDEERPKE 355
Query: 36 --------FSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLL 80
DIL++TPL L A+ ++ + VE L+LDEAD L + L
Sbjct: 356 RAKSLATVTKSDILVTTPLLLVNALSDNGHKELASMPLVESLILDEADVLLDPLFRDQTL 415
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKN 128
K + ++C NP + L+SAT+ +EELA++ + + VR++VG K+
Sbjct: 416 K----IWQSCVNPRLRVGLWSATMGSNIEELAKATIGERQKALGLEEESSLVRLVVGLKD 471
Query: 129 TASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGE 179
+A +I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ E
Sbjct: 472 SAVPNISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSE 531
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + + FR G+ W++I TD+++RG+DF+G+N V
Sbjct: 532 LMYDIPPEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGV 591
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S AAY+HR+
Sbjct: 592 VNYDIPNSAAAYVHRV 607
>gi|258578393|ref|XP_002543378.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903644|gb|EEP78045.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 958
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 142/242 (58%), Gaps = 32/242 (13%)
Query: 38 CDILISTPLRLRLAIRRKKI----DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 93
DIL+ TPL L A+ + + L V+ LVLDEAD L + + ++ V KAC+ P
Sbjct: 583 SDILVCTPLLLANALSQDEAGDMASLPSVKTLVLDEADVLLDPLFREQTLE-VWKACTCP 641
Query: 94 SIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVFA 141
+ L+SAT+ +EELA++ + +R++VG K+TA +I KLV+A
Sbjct: 642 QLRVGLWSATMGSNIEELAKATIKARQQSLGLKDESFLIRLVVGLKDTAIPNISHKLVYA 701
Query: 142 GSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD-------GIR 186
+E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D R
Sbjct: 702 ATEQGKLLGLRQLLHPTAASNSTTRLRPPFLVFTQTISRAVALHSELMYDIPPEAGGSSR 761
Query: 187 AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
V+HS+LS ++R + + FR G+ W+LI TD++ARG+DFKG+N V+NYD P+S AAY+H
Sbjct: 762 IAVLHSELSDSRRSDVMAGFRKGEIWILITTDLLARGVDFKGINGVVNYDIPNSSAAYVH 821
Query: 247 RI 248
R+
Sbjct: 822 RV 823
>gi|143459043|sp|Q0CMB0.2|ROK1_ASPTN RecName: Full=ATP-dependent RNA helicase rok1
Length = 749
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 165/316 (52%), Gaps = 69/316 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-------------------------------R 29
LA+Q E +KL +G +I LMKK + +
Sbjct: 296 LASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQ 355
Query: 30 STDLSK------FSCDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNL 79
+TD DIL++TPL L L+ R K L V +VLDEAD L +
Sbjct: 356 TTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFR 415
Query: 80 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRK 127
+ +D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K
Sbjct: 416 EQTLD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLK 474
Query: 128 NTASESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGE 179
++A +I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ E
Sbjct: 475 DSAIPNIQHKLVYAATEQGKLLGLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSE 534
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + FR G+ W+L+ TD++ARG+DF+G+N V
Sbjct: 535 LLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGV 594
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S A Y+HR+
Sbjct: 595 VNYDIPNSAAVYVHRV 610
>gi|302499710|ref|XP_003011850.1| hypothetical protein ARB_01829 [Arthroderma benhamiae CBS 112371]
gi|291175404|gb|EFE31210.1| hypothetical protein ARB_01829 [Arthroderma benhamiae CBS 112371]
Length = 779
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 163/316 (51%), Gaps = 72/316 (22%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL----VRSTDLSK--------------------- 35
LA+Q T E +KLA G +I M+K + R D +K
Sbjct: 331 LASQITNEGRKLALGTGVKITSMRKGMRVVEERGGDYTKQEDDDSEDGSNSDTDEERPKE 390
Query: 36 --------FSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEV---GNLL 80
DIL++TPL L A+ + + VE L+LDEAD L + L
Sbjct: 391 RAKSLATVTKSDILVTTPLLLVNALSDNGHEELASMPLVESLILDEADVLLDPLFRDQTL 450
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKN 128
K + ++C NP + L+SAT+ +EELA++ + + VR++VG K+
Sbjct: 451 K----IWQSCVNPRLRVGLWSATMGSNIEELAKATIGERQKALGLKEESSLVRLVVGLKD 506
Query: 129 TASESIKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGE 179
+A +I KL +A +E+GKLL LRQ S + L PP ++F Q+ RA L+ E
Sbjct: 507 SAIPNISHKLTYAATEQGKLLGLRQLLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSE 566
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + + FR G+ W++I TD+++RG+DF+G+N V
Sbjct: 567 LMYDIPPEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGV 626
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S AAY+HR+
Sbjct: 627 VNYDIPNSAAAYVHRV 642
>gi|406698237|gb|EKD01477.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 264
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
Query: 104 LPDFVEELARSIMHDA-VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP- 161
+P EELAR+ + DA VRV+VG K++A ++ Q L++ GSE+GKLLALR AE P
Sbjct: 1 MPAGAEELARAWLKDAGVRVVVGLKDSAVTTVDQSLLYTGSEQGKLLALRNLIAEGGLPY 60
Query: 162 PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIA 221
P LIFVQS ERA EL +L DG+RA +H S+T+R+ A+ DFR G WVL+ T+V+A
Sbjct: 61 PSLIFVQSIERADELARQLVLDGVRAEAVHGGKSKTRRDQAIADFRTGAAWVLVVTEVLA 120
Query: 222 RGMDFKGVNCVINYDFPDSGAAYIHRI 248
RGMDF+GV V+NYDFP + +YIHRI
Sbjct: 121 RGMDFRGVKVVVNYDFPQTVPSYIHRI 147
>gi|428671688|gb|EKX72606.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 474
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 145/253 (57%), Gaps = 12/253 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
L Q REC L + ++ ++K F + ISTP L + + + L
Sbjct: 164 LVQQVKRECIFLTGEDGIKVSALEKSQ------ESFDAPLAISTPKTLLTLLEKFEDMLK 217
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI----VRSLFSATLPDFVEELARSIM 116
+YLVLDE DKL E G + HID +++A ++ + +FS+TL V L + M
Sbjct: 218 ECKYLVLDEVDKLLEDG-YVDHIDKILEALRTKNVDAHVQKMIFSSTLQQSVLSLVSTFM 276
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
+A+ V +G +N A ++ Q+LV +++GKL+ LRQ E L PPVL+F+Q+ ER E
Sbjct: 277 PNAIHVTIGSENCACTNVSQELVCVTNDKGKLMTLRQLILEGKLIPPVLVFLQTIERVNE 336
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
LY EL + +R S+L+ ++R ++ FR G+ W+L+ TD++ARG+DFKG++ V+N+
Sbjct: 337 LYNELKGENVRVQKFTSELTVSKRAQIIEKFRTGEIWILLCTDILARGVDFKGIDSVVNF 396
Query: 236 DFPDSGAAYIHRI 248
D P + YI+R+
Sbjct: 397 DLPLTPQVYINRV 409
>gi|295657979|ref|XP_002789553.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283257|gb|EEH38823.1| ATP-dependent RNA helicase ROK1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 754
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 141/252 (55%), Gaps = 49/252 (19%)
Query: 37 SCDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP------- 85
+ DIL+STP L ++ K LS V+ L LDEAD L +DP
Sbjct: 373 NSDILVSTPPLLANSLSGNKNRDIAPLSAVQSLALDEADVL---------LDPLFREQTL 423
Query: 86 -VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASE 132
V +AC+N + L+SAT+ +EEL +S + + VR++VG K+TA
Sbjct: 424 GVWRACTNAQLRVGLWSATMGSNIEELVKSTISERQNSLGLGDESFLVRLVVGLKDTAIP 483
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES---------LNPPVLIFVQSKERAKELYGELAFD 183
+I KLV+A +E+GKLL LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 484 NISHKLVYAATEQGKLLGLRQLLHPTGAISASDIHLRPPFLVFTQTISRAVALHSELKYD 543
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD
Sbjct: 544 IPAEAGGPSRIAVLHSELSDSQRSDVMAGFRKGEIWILITTDLLSRGVDFRGINGVVNYD 603
Query: 237 FPDSGAAYIHRI 248
P+S AAYIHR+
Sbjct: 604 IPNSSAAYIHRV 615
>gi|406861712|gb|EKD14765.1| putative ATP-dependent RNA helicase rok1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 712
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 159/311 (51%), Gaps = 74/311 (23%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---------------------VRSTDLSKFS-- 37
LA+Q E KKL+ G ++ MKK + V D K S
Sbjct: 260 LASQIVNEAKKLSLGTGVKVVGMKKGMRIVEGGGAQEHGNESSSDEDDVEEMDGKKTSQP 319
Query: 38 ---CDILISTP---LR-LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-- 88
D+LI+TP LR L + + L V LVLDEAD L +DP+ +
Sbjct: 320 IVKGDMLITTPGLILRALSTSEPGRNHSLPSVRALVLDEADVL---------LDPLFRDQ 370
Query: 89 ------ACSNPSIVRSLFSATLPDFVEELARSIM-----------HDAVRVIVGRKNTAS 131
+C+NPS+ +L+SAT+ +E LA S + +R++VG K++A
Sbjct: 371 TLGIWSSCTNPSLRVTLWSATMGSNIEALASSTILSRRSSLSLPNTPIIRLVVGLKDSAI 430
Query: 132 ESIKQKLVFAGSEEGKLLALRQSF---------AESLNPPVLIFVQSKERAKELYGELAF 182
+I +LV+A +E GKLLALRQ A SL PP L+F Q+ RA L+ EL +
Sbjct: 431 PNITHRLVYAATEPGKLLALRQLLHPTAGSDPKAISLRPPFLVFTQTIPRAVALHAELLY 490
Query: 183 D-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
D R V+HSDLS + R + FR G+ W+LI TD+++RG+DF+G+N V+NY
Sbjct: 491 DIPSEAGGSSRIAVLHSDLSDSARSAVMSRFRTGEIWILITTDILSRGVDFRGINGVVNY 550
Query: 236 DFPDSGAAYIH 246
D P+SGA+YIH
Sbjct: 551 DVPNSGASYIH 561
>gi|154282411|ref|XP_001542001.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410181|gb|EDN05569.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 144/244 (59%), Gaps = 35/244 (14%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 92
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 52 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 109
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 140
+ L+SAT+ +EELA S +++ VR++VG K+TA +I KLV+
Sbjct: 110 ARLRVGLWSATMGSSIEELAMSTINEQRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 169
Query: 141 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKERAKELYGELAFD-------G 184
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 170 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGS 229
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R V+HSDLS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD P+S A Y
Sbjct: 230 SRIAVLHSDLSDSQRSDIMAAFRKGEIWILITTDLLSRGVDFRGINGVVNYDIPNSSATY 289
Query: 245 IHRI 248
+HR+
Sbjct: 290 VHRV 293
>gi|451846393|gb|EMD59703.1| hypothetical protein COCSADRAFT_164584 [Cochliobolus sativus
ND90Pr]
Length = 744
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 164/333 (49%), Gaps = 94/333 (28%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---------VRST------DLSK---------- 35
LA+Q E +KLAKG + LM+K + V T DLS+
Sbjct: 294 LASQIVNEARKLAKGTAVKATLMRKGMQVVAHEEDEVEETKDDEAKDLSEASDDNEDEDE 353
Query: 36 ---------------FSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVG 77
IL+STPL L +++R+ ++ + LVLDEAD L
Sbjct: 354 EKEVPKEKTGHGAELVKAAILVSTPLALVNSLKRRDGAVANIPSISQLVLDEADVL---- 409
Query: 78 NLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMHDA---------- 119
+DP+ + AC+NPS+ L+SAT+ +E LA S ++D
Sbjct: 410 -----LDPLFREQTLAAWNACTNPSLRVGLWSATMGSNIESLAISTLNDRWSALSLSQSA 464
Query: 120 -------VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPP 162
+R++VG K++A +I +L +A +E+GKLL LRQ S L PP
Sbjct: 465 LPPRPPLIRLVVGLKDSAIPNISHQLTYAATEQGKLLGLRQLLHPTALHIDSSQPILRPP 524
Query: 163 VLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
L+F Q+ RA L+ EL +D R V+H+DLS + R+ + FR G+ WVLI
Sbjct: 525 FLVFTQTIPRAIALHSELLYDIPPEAGGSSRIAVLHADLSSSARDTIMTRFRKGEIWVLI 584
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD++ARG+DF+G+N V+NYD P S AAY+HR+
Sbjct: 585 TTDLLARGIDFRGLNGVVNYDAPSSAAAYVHRV 617
>gi|325090778|gb|EGC44088.1| ATP-dependent RNA helicase ROK1 [Ajellomyces capsulatus H88]
Length = 751
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 35/244 (14%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 92
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 370 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 427
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 140
+ L+SAT+ +EELA+S +++ VR++VG K+TA +I KLV+
Sbjct: 428 ARLRVGLWSATMGSSIEELAKSTINERRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 487
Query: 141 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKERAKELYGELAFD-------G 184
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 488 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGA 547
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD P+S A Y
Sbjct: 548 SRIAVLHSELSDSQRSDIMAGFRKGEIWILITTDLLSRGVDFRGINGVVNYDIPNSSATY 607
Query: 245 IHRI 248
+HR+
Sbjct: 608 VHRV 611
>gi|261191576|ref|XP_002622196.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis SLH14081]
gi|239589962|gb|EEQ72605.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis SLH14081]
Length = 753
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 143/251 (56%), Gaps = 49/251 (19%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 85
DIL+STPL L ++ K L V +VLDEAD L +DP
Sbjct: 372 SDILVSTPLLLANSLSGNKKHSTATLPTVRSVVLDEADVL---------LDPLFRDQTLN 422
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 133
V AC+N + L+SAT+ +EELA+S + + VR++VG K+TA +
Sbjct: 423 VWSACTNAQLRVGLWSATMGSSIEELAKSTIGERQQSLGLRSESFLVRLVVGLKDTAIPN 482
Query: 134 IKQKLVFAGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKERAKELYGELAFD- 183
I KLV+A +E+GKLL LRQ S +++ L PP L+F Q+ RA L+ EL +D
Sbjct: 483 ISHKLVYAATEQGKLLGLRQLLHPKGGGSTSDTHLRPPFLVFTQTISRAVALHSELKYDI 542
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD
Sbjct: 543 PAEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWILITTDLLSRGVDFRGINGVVNYDI 602
Query: 238 PDSGAAYIHRI 248
P+S A+Y+HR+
Sbjct: 603 PNSSASYVHRV 613
>gi|239612630|gb|EEQ89617.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis ER-3]
gi|327356864|gb|EGE85721.1| ATP-dependent RNA helicase ROK1 [Ajellomyces dermatitidis ATCC
18188]
Length = 754
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 143/251 (56%), Gaps = 49/251 (19%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 85
DIL+STPL L ++ K L V +VLDEAD L +DP
Sbjct: 373 SDILVSTPLLLANSLSGNKKHSTATLPTVRSVVLDEADVL---------LDPLFRDQTLN 423
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 133
V AC+N + L+SAT+ +EELA+S + + VR++VG K+TA +
Sbjct: 424 VWSACTNAQLRVGLWSATMGSSIEELAKSTIGERQQSLGLRSESFLVRLVVGLKDTAIPN 483
Query: 134 IKQKLVFAGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKERAKELYGELAFD- 183
I KLV+A +E+GKLL LRQ S +++ L PP L+F Q+ RA L+ EL +D
Sbjct: 484 ISHKLVYAATEQGKLLGLRQLLHPKGGGSTSDTHLRPPFLVFTQTISRAVALHSELKYDI 543
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD
Sbjct: 544 PAEAGGSSRIAVLHSELSDSQRSDVMAGFRKGEIWILITTDLLSRGVDFRGINGVVNYDI 603
Query: 238 PDSGAAYIHRI 248
P+S A+Y+HR+
Sbjct: 604 PNSSASYVHRV 614
>gi|451994512|gb|EMD86982.1| hypothetical protein COCHEDRAFT_1197856 [Cochliobolus
heterostrophus C5]
Length = 751
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 147/262 (56%), Gaps = 40/262 (15%)
Query: 24 KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNLL 80
KK+ R +L K + IL+STPL L +++R+ ++ + LVLDEAD L +
Sbjct: 363 KKKTGRQAELVKAA--ILVSTPLALVNSLKRRDGTVANIPSISQLVLDEADVLLDP-LFR 419
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA-----------------VRVI 123
+ V AC+NPS+ L+SAT+ +E LA S ++D +R++
Sbjct: 420 EQTLAVWNACTNPSLRVGLWSATMGSNIESLAISTLNDRWSAISLSQSALPPRPPLIRLV 479
Query: 124 VGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVLIFVQSKERA 173
VG K++A +I +L +A +E+GKLL LRQ S L PP L+F Q+ RA
Sbjct: 480 VGLKDSAIPNISHQLTYAATEQGKLLGLRQLLHPTALHTDSSQPILRPPFLVFTQTIPRA 539
Query: 174 KELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
L+ EL +D R V+H+DLS + R+ + FR G+ WVLI TD++ARG+DF
Sbjct: 540 IALHSELLYDIPPEAGGSSRIAVLHADLSSSARDTIMTRFRKGEIWVLITTDLLARGIDF 599
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
+G+N V+NYD P S AAY+HR+
Sbjct: 600 RGLNGVVNYDAPSSAAAYVHRV 621
>gi|337269037|ref|YP_004613092.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
opportunistum WSM2075]
gi|336029347|gb|AEH88998.1| DEAD/DEAH box helicase domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 477
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q K LAKG L+ + R + + K + DILI+TP RL +R +
Sbjct: 105 LAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLI 164
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS ++LVLDE D++ ++G + + + KA + P +LFSAT+PD + ELA+ ++ +
Sbjct: 165 LSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQTALFSATMPDEIAELAKGLLKN 222
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+ V ++TA+ I Q +VFA +++ K L A++ V+IF ++K A +
Sbjct: 223 PVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLADAAMKSVIIFSRTKHGADRVTK 281
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 282 DLERDGFKAAVIHGNKSQNARQKALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 341
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 342 DEAESYVHRI 351
>gi|13470594|ref|NP_102163.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
gi|14021336|dbj|BAB47949.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
Length = 467
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 147/250 (58%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q K LAKG L+ + R + + K + DILI+TP RL +R +
Sbjct: 95 LAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLI 154
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS ++LVLDE D++ ++G + + + KA + P +LFSAT+PD + ELA+ ++ +
Sbjct: 155 LSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQTALFSATMPDEIAELAKGLLKN 212
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+ V ++TA+ I Q +VFA +++ K L A+ V+IF ++K A +
Sbjct: 213 PVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLADEAMKSVIIFSRTKHGADRVTK 271
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 272 DLERDGFKAAVIHGNKSQNARQKALNDFREGSVRILVATDIAARGIDVPGISHVVNFDLP 331
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 332 DEAESYVHRI 341
>gi|357028767|ref|ZP_09090792.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355537467|gb|EHH06723.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 482
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 148/250 (59%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q K LAKG L+ + R + + K + DILI+TP RL +R +
Sbjct: 106 LAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLI 165
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS ++LVLDE D++ ++G + + + KA + P +LFSAT+PD + ELA+ ++ +
Sbjct: 166 LSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQTALFSATMPDEIAELAKGLLKN 223
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+ V ++TA+ I Q +VFA +++ K L + A+ V+IF ++K A +
Sbjct: 224 PVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSKMLADEAMRSVIIFSRTKHGADRVTK 282
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 283 DLERDGFKAAVIHGNKSQNARQKALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 342
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 343 DEAESYVHRI 352
>gi|433775456|ref|YP_007305923.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
gi|433667471|gb|AGB46547.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
Length = 473
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 147/250 (58%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q K LAKG L+ + R + + K + DILI+TP RL +R +
Sbjct: 101 LAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLI 160
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS ++LVLDE D++ ++G + + + KA + P +LFSAT+PD + ELA+ ++ +
Sbjct: 161 LSDTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQTALFSATMPDEIAELAKGLLKN 218
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+ V ++TA+ I Q +VFA +++ K L A+ V+IF ++K A +
Sbjct: 219 PVRIEVSPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLADEAMKSVIIFSRTKHGADRVTK 277
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 278 DLERDGFKAAVIHGNKSQNARQKALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 337
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 338 DEAESYVHRI 347
>gi|110633776|ref|YP_673984.1| DEAD/DEAH box helicase [Chelativorans sp. BNC1]
gi|110284760|gb|ABG62819.1| DEAD/DEAH box helicase-like protein [Chelativorans sp. BNC1]
Length = 460
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 150/250 (60%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + ++LAKG L+ + R + + + + D+LI+TP RL +R +
Sbjct: 111 LAVQIEKVVRELAKGAHVSTALVLGGVSRHSQIKRMAQGVDVLIATPGRLTDLVRDGAVV 170
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS +LVLDEAD++ ++G + + + KA ++P+ +LFSAT+P +E LA S++ +
Sbjct: 171 LSETTWLVLDEADRMLDMG-FINDVRRIAKA-THPARQTALFSATMPREIEALASSLLKE 228
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VR+ V + T + I+Q ++ A +++ + L L + A+ V+IF ++K A +
Sbjct: 229 PVRIEVSPQGTTAAEIRQSVIMARTKQKRKL-LSEMLADEKMAQVIIFSRTKHGADRVTK 287
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 288 DLQHDGFQAAVIHGNKSQNARQRALNDFREGAVRILVATDIAARGIDVPGISHVVNFDLP 347
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 348 DEAESYVHRI 357
>gi|396481383|ref|XP_003841226.1| similar to ATP-dependent RNA helicase rok1 [Leptosphaeria maculans
JN3]
gi|312217800|emb|CBX97747.1| similar to ATP-dependent RNA helicase rok1 [Leptosphaeria maculans
JN3]
Length = 761
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 165/336 (49%), Gaps = 97/336 (28%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVR-------------------STDLSKFSCD 39
LA+Q E +KLAKG + LM+K E+V+ ++S F +
Sbjct: 298 LASQIVNEARKLAKGTAIKATLMRKGMEVVKRDEETEQLEAHESPENSEDDGEVSDFDAE 357
Query: 40 --------------------ILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEV 76
IL++TPL L A++RK +L V LVLDEAD L
Sbjct: 358 DKTLTKKKQTTIRAERVKAAILVATPLALLNALKRKDGTIANLPTVSQLVLDEADVL--- 414
Query: 77 GNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMH----------- 117
+DP+ + AC+NP + L+SAT+ +E L S ++
Sbjct: 415 ------LDPLFRDQTLAIWNACTNPRLRMGLWSATMGSNIETLTISTLNTRWSSLTSSQS 468
Query: 118 ------DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ------------SFAESL 159
+R++VG K++A +I +L++A +E GKLL LRQ S +L
Sbjct: 469 TTQPRPPLLRLVVGLKDSAIPNISHQLIYAATESGKLLGLRQLLHPTSSAPSTTSETATL 528
Query: 160 NPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
PP L+F Q+ RA L+ EL +D R V+H+DLS + R++ + FR G+ W
Sbjct: 529 RPPFLVFTQTIPRAIALHSELLYDIPPEAGGSSRIAVLHADLSSSARDSIMTRFRRGEIW 588
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VLIATD++ARG+DF+G+N V+NYD P S A Y+HR+
Sbjct: 589 VLIATDLLARGVDFRGLNGVVNYDVPTSAAGYVHRV 624
>gi|189197063|ref|XP_001934869.1| ATP-dependent RNA helicase ROK1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980817|gb|EDU47443.1| ATP-dependent RNA helicase ROK1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 737
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 160/331 (48%), Gaps = 92/331 (27%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK--ELVRSTDLSK----------------------- 35
LA Q E +KLAKG + LM+K ++V+ +D +
Sbjct: 275 LAAQIVNEARKLAKGTAIKATLMRKGMQVVKESDSANDDVVGSASENEDDESSSDEEEQA 334
Query: 36 -------------FSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFEVGNL 79
IL++TPL + A++R+ +L V LVLDEAD L
Sbjct: 335 EPKKKQAGRRAELVKAAILVATPLAILNALKRRDGTVANLPSVSQLVLDEADVL------ 388
Query: 80 LKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMHDA------------ 119
+DP+ + ACSNP + L+SAT+ +E L S ++
Sbjct: 389 ---LDPLFRDQTLALWNACSNPKLRIGLWSATMGSNIESLTISTLNSRWTTLSSSQLSLP 445
Query: 120 -----VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLNPPVL 164
+R++VG K++A +I +L +A +E GKLL LRQ S +L PP L
Sbjct: 446 PRPPLIRLVVGLKDSAIPNITHQLTYAATEPGKLLGLRQLLHPTAVSTSSTQPTLRPPFL 505
Query: 165 IFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+F Q+ RA L+ EL +D R V+H+DLS + R+ + FR G+ WVLI T
Sbjct: 506 VFTQTIPRAIALHSELLYDIPPEAGGSTRIAVLHADLSSSARDTIMTRFRKGEIWVLITT 565
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
D++ARG+DF+G+N V+NYD P S AAY+HR+
Sbjct: 566 DLLARGVDFRGLNGVVNYDVPASAAAYVHRV 596
>gi|225561335|gb|EEH09615.1| ATP-dependent RNA helicase ROK1 [Ajellomyces capsulatus G186AR]
Length = 751
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 144/244 (59%), Gaps = 35/244 (14%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 92
DIL+STPL L ++ K L ++ LVLDEAD L + +L + V +AC+N
Sbjct: 370 SDILVSTPLLLANSLSGNKSRSIAPLPTIQSLVLDEADVLLD--SLFRDQTLEVWRACTN 427
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASESIKQKLVF 140
+ L+SAT+ +EEL +S +++ VR++VG K+TA +I KLV+
Sbjct: 428 ARLRVGLWSATMGSSIEELTKSTINERRRSLGLRDESFLVRLVVGLKDTAIPNISHKLVY 487
Query: 141 AGSEEGKLLALRQ--------SFAES-LNPPVLIFVQSKERAKELYGELAFD-------G 184
A +E+GKLL LRQ S +++ L P L+F Q+ RA L+ EL +D
Sbjct: 488 AATEQGKLLGLRQLLNPKGASSTSDTHLRAPFLVFTQTISRAVALHSELKYDIPAEAGGS 547
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R V+HS+LS +QR + + FR G+ W+LI TD+++RG+DF+G+N V+NYD P+S A Y
Sbjct: 548 SRIAVLHSELSDSQRSDIMAGFRKGEIWILITTDLLSRGVDFRGINGVVNYDIPNSSATY 607
Query: 245 IHRI 248
+HR+
Sbjct: 608 VHRV 611
>gi|340504997|gb|EGR31377.1| hypothetical protein IMG5_111120 [Ichthyophthirius multifiliis]
Length = 464
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 152/280 (54%), Gaps = 41/280 (14%)
Query: 1 LATQTTRECKKLAKGNK--FQIKLMKKELVRSTDLSKFS-----CDILISTPLRLRLAIR 53
L Q RE + L G K ++K ++K +T+++ F DILI TPL+ +
Sbjct: 81 LGEQIRREIEFLTYGLKDAVRVKYLQK---INTEINGFKKEIEHIDILICTPLKFLKITK 137
Query: 54 RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELA 112
R + +++LV DEAD+ FE NL K + +++ + V L FSAT+ VEEL
Sbjct: 138 RAQEKFEFLQFLVFDEADRYFEF-NLAKQMKKILENFQDLHKVNYLLFSATIQHPVEELV 196
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKE 171
+ ++H+ +++ VG KN + ++QKL + SE GKLL ++ + NPPVLIFVQSK+
Sbjct: 197 KQLIHEPLKLTVGGKNNVLQCVEQKLQYCQSEFGKLLEIKNIINSGQFNPPVLIFVQSKD 256
Query: 172 RAKELYGELAFDGIRAGVIHS-----------------------DLSQTQRENAVDDFRA 208
R GE + +R +++ D S+ RE ++ FR
Sbjct: 257 R-----GEQLLEMVRTSFLNTQIKIERIDSVFQKYQFFFNKLIQDKSKQDREIIIEQFRL 311
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK W LI TD++ARG+DFKGVN VINYDFP + YIHR+
Sbjct: 312 GKIWALICTDLMARGIDFKGVNLVINYDFPTTIINYIHRV 351
>gi|452983631|gb|EME83389.1| hypothetical protein MYCFIDRAFT_39242 [Pseudocercospora fijiensis
CIRAD86]
Length = 706
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 160/305 (52%), Gaps = 67/305 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS-------------------KFSCDIL 41
LA Q E +KLA+ ++ ++K + + ++ D+L
Sbjct: 277 LAGQIVNEIRKLARNTGIKVTQVRKGMRLGSAMTTDSDGDSDEDEDHSEGREVSVKSDVL 336
Query: 42 ISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE---------VGNLLKHIDPVVKACSN 92
+STP L + L V+YLVLDEAD L + + + L H++ V
Sbjct: 337 VSTPGILASIVSASDAKLPDVQYLVLDEADVLLDPLFREQTLGIWHALPHVELRV----- 391
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA-------------VRVIVGRKNTASESIKQKLV 139
SL+SAT+ +EELA S++ + +R++VG K++A +++ +L+
Sbjct: 392 -----SLWSATMGSNIEELAISVIGERKAKLGIVQDDSPLIRLVVGLKDSAVPNVEHRLI 446
Query: 140 FAGSEEGKLLALRQ------SFAESLNP---PVLIFVQSKERAKELYGELAFD------G 184
+A SE+GKL+ LRQ +E+ P P L+F Q+ ERA L+ EL +D G
Sbjct: 447 YAASEQGKLMGLRQLLHPTTPSSEAGPPLLLPFLVFTQTIERAVALHSELLYDIPAEAGG 506
Query: 185 I-RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAA 243
I R V+HSDLS + R+ + FR G+ WVLI TD+++RG+DF+GVN V+NYD P S AA
Sbjct: 507 ISRIAVLHSDLSDSARDTVMTKFRKGEIWVLITTDLLSRGVDFRGVNGVVNYDIPTSSAA 566
Query: 244 YIHRI 248
Y+HR+
Sbjct: 567 YVHRV 571
>gi|296808523|ref|XP_002844600.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
gi|238844083|gb|EEQ33745.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
Length = 740
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 140/251 (55%), Gaps = 49/251 (19%)
Query: 38 CDILISTPLRLRLAIRRKK----IDLSRVEYLVLDEADKLFEVGNLLKHIDP-------- 85
DILI+TPL+L A+ + V LVLDEAD L +DP
Sbjct: 362 SDILITTPLQLVNALSDNGHKVLASMPLVRSLVLDEADVL---------LDPLFRDQTLS 412
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 133
+ ++C NP + L+SAT+ +EELA+S + + +R++VG K++A +
Sbjct: 413 IWRSCVNPRLRVGLWSATMGSNIEELAKSTIGERQKSLGLKEESFLIRLVVGLKDSAIPN 472
Query: 134 IKQKLVFAGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGELAFD- 183
I L +A +E+GKLL LRQ S ++ L PP +IF Q+ RA L+ EL +D
Sbjct: 473 ISHTLTYAATEQGKLLGLRQLLHPTTATASASKHLRPPFIIFTQTIPRAVALHSELMYDI 532
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HS+LS QR + + FR G+ W++I TD+++RG+DF+G+N V+NYD
Sbjct: 533 PPEAGGSSRIAVLHSELSDYQRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGVVNYDI 592
Query: 238 PDSGAAYIHRI 248
P+S AAY+HR+
Sbjct: 593 PNSAAAYVHRV 603
>gi|330906625|ref|XP_003295542.1| hypothetical protein PTT_01533 [Pyrenophora teres f. teres 0-1]
gi|311333102|gb|EFQ96370.1| hypothetical protein PTT_01533 [Pyrenophora teres f. teres 0-1]
Length = 750
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 148/275 (53%), Gaps = 56/275 (20%)
Query: 19 QIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK---IDLSRVEYLVLDEADKLFE 75
Q + KK+ R +L K + IL++TPL + A++R+ +L V LVLDEAD L
Sbjct: 354 QAEPKKKQAGRRAELVKAA--ILVATPLAILNALKRRDGTVANLPSVSQLVLDEADVL-- 409
Query: 76 VGNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEELARSIMHDA-------- 119
+DP+ + AC+NP + L+SAT+ +E L S ++
Sbjct: 410 -------LDPLFRDQTLALWNACTNPKLRIGLWSATMGSNIESLTISTLNSRWTNLSSSQ 462
Query: 120 ---------VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ----------SFAESLN 160
+R++VG K++A +I +L +A +E GKLL LRQ S +L
Sbjct: 463 PTLPPRPPLIRLVVGLKDSAIPNITHQLTYAATEPGKLLGLRQLLHPTSISTTSTQPTLR 522
Query: 161 PPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
PP L+F Q+ RA L+ EL +D R V+H+DLS + R+ + FR G+ WV
Sbjct: 523 PPFLVFTQTIPRAIALHSELLYDIPPEAGGSTRIAVLHADLSSSARDTIMTRFRKGEIWV 582
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LI TD++ARG+DF+G+N V+NYD P S AAY+HR+
Sbjct: 583 LITTDLLARGVDFRGLNGVVNYDVPASAAAYVHRV 617
>gi|313226555|emb|CBY21701.1| unnamed protein product [Oikopleura dioica]
Length = 547
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 130/223 (58%), Gaps = 12/223 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP---------VV 87
SC +L TP R+ + K++DLS+ + +VLDE DK+ E+ N L DP +
Sbjct: 183 SCHVLCGTPNRIINMLDSKELDLSKCQMIVLDECDKMLEITNKLNPDDPKSFSAQVNLLR 242
Query: 88 KACSNPSIVRSLFSATLPDFVEELARSIMHD-AVRVIVGRK-NTASESIKQKLVFAGSEE 145
C++ + LFSAT+ VE+ + ++ V V +G+ N ++++ QK+++ G+E
Sbjct: 243 SQCADNHQM-GLFSATMSGSVEKFGHANFNNQGVTVAIGKSGNAVNQNVSQKVIYCGNER 301
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
GKLLALR+ + PP ++F ++KER + + GEL +DGI A + + S R+ +
Sbjct: 302 GKLLALREFIKDGFRPPAILFTETKERCQRIMGELLYDGINAMSLCAAKSNADRQKVIQA 361
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R GK W+LI TDV +RG+D + VINYD P+S Y+HR+
Sbjct: 362 TRVGKVWLLITTDVASRGLDLPMTSTVINYDCPNSVTDYVHRV 404
>gi|313243489|emb|CBY42223.1| unnamed protein product [Oikopleura dioica]
Length = 410
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 130/222 (58%), Gaps = 10/222 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP--------VVK 88
SC +L TP R+ + K++DLS+ + +VLDE DK+ E+ N L DP +++
Sbjct: 183 SCHVLCGTPNRIINMLDSKELDLSKCQMIVLDECDKMLEITNKLNPDDPKSFSAQVNLLR 242
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHD-AVRVIVGRK-NTASESIKQKLVFAGSEEG 146
+ + LFSAT+ VE+ + ++ V V +G+ N ++++ QK+++ G+E G
Sbjct: 243 SQCADNHQMGLFSATMSGSVEKFGHANFNNQGVTVAIGKSGNAVNQNVSQKVIYCGNERG 302
Query: 147 KLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDF 206
KLLALR+ + PP ++F ++KER + + GEL +DGI A + + S R+ +
Sbjct: 303 KLLALREFIKDGFRPPAILFTETKERCQRIMGELLYDGINAMSLCAAKSNADRQKVIQAT 362
Query: 207 RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R GK W+LI TDV +RG+D + VINYD P+S Y+HR+
Sbjct: 363 RVGKVWLLITTDVASRGLDLPMTSTVINYDCPNSVTDYVHRV 404
>gi|341899895|gb|EGT55830.1| hypothetical protein CAEBREN_29719 [Caenorhabditis brenneri]
Length = 582
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 141/255 (55%), Gaps = 14/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT E K G+ + E TD+ + DIL+STP R+ + KID S
Sbjct: 218 LAAQTYTEFVKYCDGSSISVANFSGE---ETDIG--TADILVSTPNRIVFHL--DKIDTS 270
Query: 61 RVEYLVLDEADKLFEVGN-----LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+ +L++DE+D+LFEV + + KAC + FSAT VE+ +
Sbjct: 271 ALRWLIVDESDRLFEVVEGQDKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKEN 330
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ V VG +N+++ S+KQ+L + G+E+GK +A+R S PP L+FVQSK+RA +
Sbjct: 331 IDSIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAVQ 390
Query: 176 LYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L A D ++ I+S S +R+ ++ FR G+ WVL+ T+V+ RG+D V VI
Sbjct: 391 LVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTEVLGRGLDLSDVGLVI 450
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S +YIHR+
Sbjct: 451 NYDLPTSIVSYIHRV 465
>gi|341876893|gb|EGT32828.1| hypothetical protein CAEBREN_25081 [Caenorhabditis brenneri]
Length = 582
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 141/255 (55%), Gaps = 14/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT E K G+ + E TD+ + DIL+STP R+ + KID S
Sbjct: 218 LAAQTYTEFVKYCDGSSISVANFSGE---ETDIG--TADILVSTPNRIVFHL--DKIDTS 270
Query: 61 RVEYLVLDEADKLFEVGN-----LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+ +L++DE+D+LFEV + + KAC + FSAT VE+ +
Sbjct: 271 ALRWLIVDESDRLFEVVEGQDKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKEN 330
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ V VG +N+++ S+KQ+L + G+E+GK +A+R S PP L+FVQSK+RA +
Sbjct: 331 IDSIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAIRNLLRTSFKPPALVFVQSKDRAVQ 390
Query: 176 LYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L A D ++ I+S S +R+ ++ FR G+ WVL+ T+V+ RG+D V VI
Sbjct: 391 LVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTEVLGRGLDLSDVGLVI 450
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S +YIHR+
Sbjct: 451 NYDLPTSIVSYIHRV 465
>gi|319783363|ref|YP_004142839.1| DEAD/DEAH box helicase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169251|gb|ADV12789.1| DEAD/DEAH box helicase domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 474
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 146/250 (58%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q K LAKG L+ + R + + K + DILI+TP RL +R +
Sbjct: 101 LAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLM 160
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ ++LVLDE D++ ++G + + + KA + P LFSAT+P+ + ELA+ ++ +
Sbjct: 161 LADTKWLVLDEGDRMLDMG-FINDVKRIAKATA-PDRQTVLFSATMPNEIAELAKGLLKN 218
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV V ++TA+ I Q +VFA +++ K L A+ V+IF ++K A +
Sbjct: 219 PIRVEVAPQSTAAAEIVQGVVFARTKQ-KRQVLSTMLADETMKSVIIFSRTKHGADRVTK 277
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG +A VIH + SQ R+ A++DFR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 278 DLERDGFKAAVIHGNKSQNARQKALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 337
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 338 DEAESYVHRI 347
>gi|226483435|emb|CAX74018.1| putative ATP-dependent RNA helicase DDX52 [Schistosoma japonicum]
Length = 606
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 151/283 (53%), Gaps = 44/283 (15%)
Query: 9 CKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLR----LAIRRKKIDLSRVEY 64
C+K A+ N + K + VR L S I++STP RL L + + I+LSR+ +
Sbjct: 192 CRKRAEVNDASVLTKKFKNVRELKLP-ISTKIIVSTPNRLSNLLSLPLDKCPINLSRLSW 250
Query: 65 LVLDEADKLFEV-----------GN--------LLKHIDPVVKACSNPSIVR-------- 97
+V+DE DK+ E+ GN + P+ KA N + V
Sbjct: 251 IVVDECDKMLEINFNDIPSNSEPGNKTNYRPRGFHNQLAPIFKAVQNINHVEQSNIRPAV 310
Query: 98 SLFSATLPDFVEELARSIM----------HDAVRVIVGRKNTASESIKQKLVFAGSEEGK 147
+LFSAT+PD V AR+ + ++ + + VG +N A +IKQ+L + +E+GK
Sbjct: 311 ALFSATVPDEVVSWARNQLPALLKADNSEYELIELRVGIRNAAVSTIKQELRYCATEQGK 370
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGE--LAFDGIRAGVIHSDLSQTQRENAVDD 205
LL +R A L P LIF+QS++RA E+ E L+ I A VI SD ++ QR N V
Sbjct: 371 LLEMRYLLANGLAYPCLIFMQSRDRANEILKEILLSDTNILANVISSDKTEAQRVNVVRA 430
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G VLI TD++ RG+DFKGV+ V+NYD P S YIHRI
Sbjct: 431 FREGHLHVLICTDLLGRGIDFKGVSMVVNYDVPPSKQEYIHRI 473
>gi|340897453|gb|EGS17043.1| ATP dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 796
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 149/265 (56%), Gaps = 37/265 (13%)
Query: 14 KGNKFQIKLMKKELVRSTDLSKFSCDILISTP------LRLRLAIRRKKIDLSRVEYLVL 67
KGNK + + + D DIL++TP L R + +KI L V L+L
Sbjct: 404 KGNKHKGRKNNA----NADKPPTRVDILVTTPKILLNFLTGRSSGGTRKI-LPTVRSLIL 458
Query: 68 DEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL------ARSIMHDA-- 119
DEAD L + K + +AC+N + + +SAT+ +E L R ++A
Sbjct: 459 DEADVLLDT-IFRKQTMGIWRACTNTDVSLTCWSATMASSIEALITKQLDRRYRQYNASR 517
Query: 120 --VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQS 169
+R++VG K+TA +I KL++ +E+GKLLA+RQ S A+S L PP L+F Q+
Sbjct: 518 PLIRLVVGLKDTAVPNITHKLIYTATEKGKLLAIRQLLHPVSGADSGPPLRPPFLVFTQT 577
Query: 170 KERAKELYGELAFD-GIRAG------VIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
ERA+ L+ EL +D I AG V+HS L+ T R + FRAG+ WVLI TDV+AR
Sbjct: 578 IERAQALFEELQYDIPIEAGGPARLAVLHSSLTDTARSRIMARFRAGEVWVLITTDVLAR 637
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHR 247
G+DF GVN V+NYD P S A+Y+HR
Sbjct: 638 GIDFPGVNGVVNYDVPTSAASYVHR 662
>gi|224127810|ref|XP_002329183.1| predicted protein [Populus trichocarpa]
gi|222870964|gb|EEF08095.1| predicted protein [Populus trichocarpa]
Length = 100
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 76/86 (88%)
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
+LIFVQS ERA+ELYGEL FD IR GVIHS+LSQ QREN +DDFRAGKTWVLIATDV+ R
Sbjct: 1 MLIFVQSIERAEELYGELKFDSIRVGVIHSNLSQEQRENVIDDFRAGKTWVLIATDVLGR 60
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
GMDFKGV CVINYDFPD A+YIHRI
Sbjct: 61 GMDFKGVKCVINYDFPDCAASYIHRI 86
>gi|268567592|ref|XP_002640036.1| Hypothetical protein CBG12508 [Caenorhabditis briggsae]
Length = 573
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 143/255 (56%), Gaps = 14/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT E K G + E TD++ DIL+STP R+ + KID S
Sbjct: 213 LAAQTYTEFVKYCSGTSISVANFSGE---ETDITH--ADILVSTPNRIVFHL--DKIDTS 265
Query: 61 RVEYLVLDEADKLFEV--GN---LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+ +LV+DE+D+LFEV G + + KAC + FSAT VE+ +
Sbjct: 266 LLRWLVVDESDRLFEVIEGQEKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKDN 325
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ + V VG +N+++ S+KQ+L + G+E+GK +A+R + PP L+FVQSK+RA +
Sbjct: 326 IENIGMVCVGERNSSNTSVKQELTYCGTEDGKKVAIRNLLRTAFRPPALVFVQSKDRAVQ 385
Query: 176 LYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L A D ++ I+S S +R++ ++ FR G+ WVL+ T+++ RG+D V VI
Sbjct: 386 LVKLLSAIDSNLKVDSINSGKSDKERDDTMERFRNGEIWVLVCTELLGRGLDLSDVGLVI 445
Query: 234 NYDFPDSGAAYIHRI 248
NYD P S +YIHR+
Sbjct: 446 NYDLPTSIISYIHRV 460
>gi|367051843|ref|XP_003656300.1| hypothetical protein THITE_2146851 [Thielavia terrestris NRRL 8126]
gi|347003565|gb|AEO69964.1| hypothetical protein THITE_2146851 [Thielavia terrestris NRRL 8126]
Length = 761
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 133/240 (55%), Gaps = 31/240 (12%)
Query: 38 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 93
DIL++TP L + K L V L+LDEAD L + K + +AC++P
Sbjct: 375 VDILVTTPKTLLNFLSGGKSGARKVLPTVRSLILDEADVLLDP-IFRKQTMGIWRACTHP 433
Query: 94 SIVRSLFSATLPDFVEELA------RSIMHDA-----VRVIVGRKNTASESIKQKLVFAG 142
+ + +SAT+ +E L RS D+ +R++VG K+TA ++ KL++
Sbjct: 434 DVALTCWSATMASNIEALVTKQLEKRSKRPDSSPRPLIRLVVGLKDTAVPNVTHKLIYTA 493
Query: 143 SEEGKLLALRQ-----SFAES---LNPPVLIFVQSKERAKELYGELAFD-------GIRA 187
+E GKLLALRQ S A+S L PP L+F Q+ ERA+ L+ EL +D R
Sbjct: 494 TEAGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIERAQALHDELKYDIPLEAGGPARV 553
Query: 188 GVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
V+HS L R V FRAG WVL+ TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 554 AVLHSSLPDAARARIVARFRAGDVWVLVTTDVLARGVDFAGVNGVVNYDVPTSAAAYVHR 613
>gi|17508543|ref|NP_492326.1| Protein R05D11.4 [Caenorhabditis elegans]
gi|3878881|emb|CAA99891.1| Protein R05D11.4 [Caenorhabditis elegans]
Length = 581
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 128/217 (58%), Gaps = 9/217 (4%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN-----LLKHIDPVVKACSNP 93
DIL+STP R+ + KID S + +LV+DE+D+LFEV + + KAC
Sbjct: 249 DILVSTPNRIVFHL--DKIDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAK 306
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+ FSAT VE+ + + + V VG +N+++ S+KQKL + G+E+GK +A+R
Sbjct: 307 CTRVAFFSATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRN 366
Query: 154 SFAESLNPPVLIFVQSKERAKELYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRAGKT 211
S PP L+FVQSK+RA +L L A D ++ I+S S +R+ ++ FR G+
Sbjct: 367 LLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEI 426
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
WVL+ T+++ RG+D V VINYD P S +YIHR+
Sbjct: 427 WVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRV 463
>gi|389631843|ref|XP_003713574.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae 70-15]
gi|152060504|sp|A4RMV8.1|ROK1_MAGO7 RecName: Full=ATP-dependent RNA helicase ROK1
gi|351645907|gb|EHA53767.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae 70-15]
gi|440467845|gb|ELQ37039.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae Y34]
gi|440478590|gb|ELQ59409.1| ATP-dependent RNA helicase ROK1 [Magnaporthe oryzae P131]
Length = 775
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 134/248 (54%), Gaps = 40/248 (16%)
Query: 38 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 92
DIL++TP+ L K L RV L+LDEAD L + L + + AC N
Sbjct: 398 ADILVTTPMLLLNFLSKGTSTTKKRLPRVRSLILDEADVLLD--QLFREQTMGIWSACRN 455
Query: 93 PSIVRSLFSATLPDFVE----ELARSIMHDA-----VRVIVGRKNTASESIKQKLVFAGS 143
P++ S +SAT+ +E + R+ DA +R++VG K+TA +I +LV+ +
Sbjct: 456 PNLRVSFWSATMASNIETHILDNLRAQADDAPAPPLIRLVVGLKDTAVPNISHRLVYTAT 515
Query: 144 EEGKLLALRQ-----SFAE------------SLNPPVLIFVQSKERAKELYGELAFD--- 183
E GKLLALRQ SF+ L PP L+FVQ+ ERA L+ EL +D
Sbjct: 516 ESGKLLALRQLLHPASFSTTTSSTTTPEDETPLRPPFLVFVQTIERATALHEELKYDIPA 575
Query: 184 ----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
R V+HS + ++ R + FRA WVLI TDV+ARG+DF GVN V+NYD P
Sbjct: 576 AAGGASRVAVLHSSMPESARAAVIRRFRAADVWVLITTDVLARGVDFAGVNGVVNYDVPG 635
Query: 240 SGAAYIHR 247
S AAY+HR
Sbjct: 636 SAAAYVHR 643
>gi|440638517|gb|ELR08436.1| hypothetical protein GMDG_00500 [Geomyces destructans 20631-21]
Length = 736
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 50/252 (19%)
Query: 38 CDILISTPLRLRLAIRRK----KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TPL L A+ + ++ L V +L+LDEAD L +DP+ +
Sbjct: 355 ADILVTTPLILLHALTKPGSKDRLPLETVCHLILDEADVL---------LDPLFRDQTLG 405
Query: 89 ---ACSNPSIVRSLFSATLPDFVEELARSIM-----------HDAVRVIVGRKNTASESI 134
+C +P + SL+SAT+ +E LA S + VR+++G K++A +I
Sbjct: 406 IWESCVSPLLHVSLWSATMGSSIETLAVSTISSRRERLSLPAQPLVRLVIGLKDSAIPNI 465
Query: 135 KQKLVFAGSEEGKLLALRQSFAES-----------LNPPVLIFVQSKERAKELYGELAFD 183
L++A +E GKL+ LRQ + L PP L+F Q+ RA L+ EL +D
Sbjct: 466 THHLIYAATEPGKLIGLRQLLHPTSPCLASPSDPKLRPPFLVFTQTIPRAIALHSELLYD 525
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS + R + FR G+ W+LI TD+++RG+DF+G+N V+NYD
Sbjct: 526 IPAEAGGSSRLAVLHSDLSDSARSAIMSRFRNGEIWILITTDILSRGVDFRGINGVVNYD 585
Query: 237 FPDSGAAYIHRI 248
P SGA+YIHR+
Sbjct: 586 VPSSGASYIHRV 597
>gi|115397521|ref|XP_001214352.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192543|gb|EAU34243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 736
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 66/308 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-------------------------------R 29
LA+Q E +KL +G +I LMKK + +
Sbjct: 296 LASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQ 355
Query: 30 STDLSK------FSCDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNL 79
+TD DIL++TPL L L+ R K L V +VLDEAD L +
Sbjct: 356 TTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFR 415
Query: 80 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRK 127
+ +D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K
Sbjct: 416 EQTLD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLK 474
Query: 128 NTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFD---- 183
++A +I+ KLV+A +E+ R + L PP LIF Q+ RA L+ EL +D
Sbjct: 475 DSAIPNIQHKLVYAATEQA-----RTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPE 529
Query: 184 ---GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
R V+HS+LS +QR + FR G+ W+L+ TD++ARG+DF+G+N V+NYD P+S
Sbjct: 530 AGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNS 589
Query: 241 GAAYIHRI 248
A Y+HR+
Sbjct: 590 AAVYVHRV 597
>gi|403223240|dbj|BAM41371.1| uncharacterized protein TOT_030000633 [Theileria orientalis strain
Shintoku]
Length = 511
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 136/258 (52%), Gaps = 25/258 (9%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
L Q EC L KG ++ + K + + F I ++TPL L + L
Sbjct: 186 LVQQVKSECVYLTKGKGVKVVALDKTI------TTFDFSIAVATPLTLYKLMLEHPDMLD 239
Query: 61 RVEYLVLDEADKLFEVG---------NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
+E LVLDEADKL E G N LK+ D V KAC FS+T+ + L
Sbjct: 240 NLEMLVLDEADKLLEDGYHDNVDYVLNHLKNKDRVQKAC---------FSSTIQPELLVL 290
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+S + V +G +N ++ Q+LV SE+GK+L L+Q E L PP+LIF+QS
Sbjct: 291 AKSYFKSPIHVTIGSENVCCSNVHQELVCVTSEKGKILTLKQLINEGKLLPPILIFLQSI 350
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
+R ELY EL ++ + +R+ ++ FR G+ W LI TD+++RG++FKGV+
Sbjct: 351 KRVNELYEELMTSTLKVEKFTKKMDLKERQTVIEKFRTGEIWTLICTDILSRGINFKGVH 410
Query: 231 CVINYDFPDSGAAYIHRI 248
V+N+D P S YI+R+
Sbjct: 411 SVVNFDLPLSSQLYINRV 428
>gi|320166584|gb|EFW43483.1| Ddx52 protein [Capsaspora owczarzaki ATCC 30864]
Length = 256
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 94/119 (78%)
Query: 130 ASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGV 189
A+E++KQ+L+F G EEGK+LA++Q + + PP+L+FVQS +RAK+L+ E+ ++ + V
Sbjct: 2 ATENVKQQLLFVGREEGKILAIQQMIQKGVRPPILVFVQSVDRAKQLHREMLYEKMNVDV 61
Query: 190 IHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IH++ + +RE A+ +FR GKTW LIAT+++ARGMDFKGVN VIN+DFP + +YIHRI
Sbjct: 62 IHAERTSLERETAIKNFRTGKTWFLIATELLARGMDFKGVNLVINFDFPQTAESYIHRI 120
>gi|308499411|ref|XP_003111891.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
gi|308268372|gb|EFP12325.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
Length = 593
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 128/217 (58%), Gaps = 9/217 (4%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEV-----GNLLKHIDPVVKACSNP 93
DIL+STP R+ + KID S + +L++DE+D+LFEV + + KAC
Sbjct: 266 DILVSTPNRIVFHL--DKIDTSALRWLIVDESDRLFEVIEGQEKCFRNQLGAIYKACDAK 323
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+ FSAT VE+ + + + V VG +N+++ S+KQ+L + G+E+GK +A+R
Sbjct: 324 CTRVAFFSATFSHEVEKWCKENIDNIGMVCVGERNSSNTSVKQELTYCGTEDGKKIAIRN 383
Query: 154 SFAESLNPPVLIFVQSKERAKELYGEL-AFD-GIRAGVIHSDLSQTQRENAVDDFRAGKT 211
S PP L+FVQSK+RA +L L A D ++ I+S S +R+ ++ FR G+
Sbjct: 384 LLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMERFRRGEI 443
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
WVL+ T+++ RG+D V VINYD P S +YIHR+
Sbjct: 444 WVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRV 480
>gi|336273804|ref|XP_003351656.1| hypothetical protein SMAC_00198 [Sordaria macrospora k-hell]
gi|380095935|emb|CCC05982.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 777
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 139/247 (56%), Gaps = 38/247 (15%)
Query: 38 CDILISTPLRL----------RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
DIL++TP L + R K L V+ L+LDEAD L + K +
Sbjct: 390 VDILVTTPKILLNFLCGGEKEKGKPRIVKKTLPTVQSLILDEADVLLDP-IFRKQTMGIW 448
Query: 88 KACSNPSIVRSLFSATLPDFVEEL-ARSIMHDA-----------VRVIVGRKNTASESIK 135
+AC++P++ + +SAT+ +E L +SI A +R++VG K+TA +I
Sbjct: 449 RACTHPNLGMTCWSATMASNIEALLTKSIEKRAKRTPEQTPKPLIRLVVGLKDTAVPNIT 508
Query: 136 QKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKERAKELYGELAFD---- 183
KL++ +E GKLLALRQ S A+S L PP L+F Q+ +RA+ L+ EL +D
Sbjct: 509 HKLIYCATEPGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIDRAQALHDELKYDIPLE 568
Query: 184 ---GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
R V+HS LS + R + FR+G+ WVLI TDV+ARG+DF GVN V+NYD P S
Sbjct: 569 AGGSARVAVLHSSLSDSVRSKIMARFRSGEVWVLITTDVLARGVDFAGVNGVVNYDVPVS 628
Query: 241 GAAYIHR 247
AAY+HR
Sbjct: 629 AAAYVHR 635
>gi|294888665|ref|XP_002772561.1| ATP-dependent RNA helicase rok1, putative [Perkinsus marinus ATCC
50983]
gi|239876829|gb|EER04377.1| ATP-dependent RNA helicase rok1, putative [Perkinsus marinus ATCC
50983]
Length = 239
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKELYGE 179
RV VG++ +A++ ++Q+L+F G+EEGKL+ALR+ A + PP L FVQSK RA+EL E
Sbjct: 10 RVWVGQQGSAAKDVQQRLLFCGNEEGKLVALRRMIANGEVKPPCLAFVQSKARAQELTKE 69
Query: 180 LAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
L FDG+ IHSD+S+ QR+ +++FR GK W+LI TDV+ARG+DFKGV VIN D P
Sbjct: 70 LMFDGVFVACIHSDMSRKQRDTCIENFRLGKIWILICTDVMARGVDFKGVAQVINIDIPR 129
Query: 240 SGAAYIHRI 248
+ A YIHR+
Sbjct: 130 ASATYIHRV 138
>gi|429864030|gb|ELA38415.1| ATP-dependent RNA helicase rok1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 707
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 129/243 (53%), Gaps = 42/243 (17%)
Query: 38 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TP L + ++ L V+ L+LDEAD L +DP+ +
Sbjct: 343 ADILVTTPTLLVNFLSSGSSKTQLVLPTVKSLILDEADVL---------LDPLFREQTMT 393
Query: 89 ---ACSNPSIVRSLFSATLPDFVEELARSIMHDA------VRVIVGRKNTASESIKQKLV 139
ACSNP + + +SAT +E L + + + +R++VG K+TA ++ KLV
Sbjct: 394 IWTACSNPDLKITFWSATFGSNIETLVKEMQAERASNRPLLRLVVGLKDTAVPNVTHKLV 453
Query: 140 FAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD-------G 184
+ +E+GKLL LRQ L PP L+F Q+ ERA L EL +D
Sbjct: 454 YTATEKGKLLGLRQLLHPTAGDDSGPPLRPPFLVFTQTIERATALAEELKYDIPLAAGGS 513
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R +HS L+ R + FRAG+ W+LI TDV+ARG+DF GVN V+NYD P S AAY
Sbjct: 514 TRIAALHSGLTDKARAGIMRRFRAGEVWILITTDVLARGVDFAGVNGVVNYDVPGSSAAY 573
Query: 245 IHR 247
+HR
Sbjct: 574 VHR 576
>gi|390448328|ref|ZP_10233949.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
gi|389666297|gb|EIM77749.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
Length = 453
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 150/250 (60%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q ++L++ L+ + R++ + + + DIL++TP RL +R ++
Sbjct: 95 LAVQIDDVVRELSRHAHLATALVLGGVSRNSQVKRLAQGVDILVATPGRLTDIVRSGELS 154
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ +LVLDEAD++ ++G + + + +A ++P+ +LFSAT+P VE LA+S+++D
Sbjct: 155 LAETRWLVLDEADRMLDMG-FINDVRRIARA-THPARQTALFSATMPKEVEGLAQSLLND 212
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV + +++T + I Q LV A +++ + + L A+ V++F ++K A +
Sbjct: 213 PLRVEIAKQSTTAGEITQHLVMARTKQKRKI-LSDMLADEAMRSVIVFARTKHGADRVTR 271
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG A VIH + SQ R+ A++ FR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 272 DLERDGFEAAVIHGNKSQNARQRALNGFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 331
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 332 DQPESYVHRI 341
>gi|254584210|ref|XP_002497673.1| ZYRO0F10934p [Zygosaccharomyces rouxii]
gi|238940566|emb|CAR28740.1| ZYRO0F10934p [Zygosaccharomyces rouxii]
Length = 603
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L++V+YLVLDEAD++ ++G I +V+ C P +
Sbjct: 266 GCDLLVATPGRLNDLLERGKISLAKVKYLVLDEADRMLDMG-FEPQIRNIVEGCDMPGVD 324
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+ +FSAT P ++ LAR + D + + VGR + SE+I Q++++ +E K AL
Sbjct: 325 QRQTLMFSATFPVDIQHLARDFLSDYIFLSVGRVGSTSENITQRVLYV-EDEDKKSALLD 383
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ S LIFV++K A +L L RA IH D +Q++RE A+ F+ GK +
Sbjct: 384 LLSASSGGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALGSFKTGKADL 443
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 444 LVATAVAARGLDIPNVTHVINYDLPGDVDDYVHRI 478
>gi|171694872|ref|XP_001912360.1| hypothetical protein [Podospora anserina S mat+]
gi|170947678|emb|CAP59840.1| unnamed protein product [Podospora anserina S mat+]
Length = 763
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 32/241 (13%)
Query: 38 CDILISTP------LRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DIL++TP L + K L V L+LDEAD L + K + K+C
Sbjct: 386 VDILVTTPKILLNFLSDDGKLTNSKRTLPTVRSLILDEADVLLDP-IFRKQTMAIWKSCV 444
Query: 92 NPSIVRSLFSATLPDFVEELAR----------SIMHDAVRVIVGRKNTASESIKQKLVFA 141
+P + + +SAT+ +E L +I +R++VG K+TA ++ KL++
Sbjct: 445 HPDVALTCWSATMASNIEALVTKHLSKRAKHFNISRPLIRLVVGLKDTAVPNVTHKLIYT 504
Query: 142 GSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKERAKELYGELAFD-------GIR 186
+E+GKLLALRQ S ++S L PP ++F Q+ +RAK L+ EL FD R
Sbjct: 505 ATEQGKLLALRQLLHPASSSDSGPPLRPPFIVFTQTIDRAKALHKELQFDIPLEAGGQAR 564
Query: 187 AGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIH 246
V+HS LS R + FR G+ WVLI TDV+ARG+DF GVN V+NYD P S A Y+H
Sbjct: 565 IAVLHSSLSDQIRSKIMTKFRTGEVWVLITTDVLARGVDFAGVNGVVNYDVPTSAAGYVH 624
Query: 247 R 247
R
Sbjct: 625 R 625
>gi|310790076|gb|EFQ25609.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 712
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 42/243 (17%)
Query: 38 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TP L + K L V L+LDEAD L +DP+ +
Sbjct: 351 VDILVTTPALLFNFLSSGSPKTKRKLPTVTSLILDEADVL---------LDPLFREQTMA 401
Query: 89 ---ACSNPSIVRSLFSATLPDFVEEL------ARSIMHDAVRVIVGRKNTASESIKQKLV 139
AC+NP + + +SAT +E L AR +R++VG K+TA ++ KLV
Sbjct: 402 IWSACTNPELRTTFWSATFGSNIETLVTEAQSARPESKPLIRLVVGLKDTAVPNVTHKLV 461
Query: 140 FAGSEEGKLLALRQSF--------AESLNPPVLIFVQSKERAKELYGELAFD-------G 184
+ +E+GKLL LRQ L PP L+F Q+ ERA L EL +D
Sbjct: 462 YTATEKGKLLGLRQLLRPTAGDDSGPPLRPPFLVFTQTIERATALAEELKYDIPLAAGGS 521
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R +HS L+ R + + FRAG+ W+LI TDV+ARG+DF GVN V+NYD P S AAY
Sbjct: 522 DRIAALHSGLADRARADIMRRFRAGEVWILITTDVLARGVDFAGVNGVVNYDVPGSSAAY 581
Query: 245 IHR 247
+HR
Sbjct: 582 VHR 584
>gi|50292931|ref|XP_448898.1| hypothetical protein [Candida glabrata CBS 138]
gi|74664283|sp|Q8TFK8.1|DED1_CANGA RecName: Full=ATP-dependent RNA helicase DED1
gi|20086311|gb|AAM08102.1| DED1p [Candida glabrata]
gi|49528211|emb|CAG61868.1| unnamed protein product [Candida glabrata]
Length = 617
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 278 GCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPPTG 336
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR +HD + + VGR + SE+I Q++++ + + K AL
Sbjct: 337 ERQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYVENRD-KNSALLD 395
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A S + LIFV++K A +L L A IH D SQ +RE A+ FR+G+ +
Sbjct: 396 LLAASNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANI 455
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 456 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 490
>gi|85114733|ref|XP_964745.1| hypothetical protein NCU00919 [Neurospora crassa OR74A]
gi|74629077|sp|Q7SFC8.1|ROK1_NEUCR RecName: Full=ATP-dependent RNA helicase rok-1
gi|28926538|gb|EAA35509.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567296|emb|CAE76585.1| related to ATP-dependent RNA helicase ROK1 [Neurospora crassa]
Length = 781
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 134/247 (54%), Gaps = 38/247 (15%)
Query: 38 CDILISTPLRL----------RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
DIL++TP L + R K L V+ L+LDEAD L + K +
Sbjct: 394 VDILVTTPKILLNFLCGGEKEKGKPRIIKKTLPTVQSLILDEADVLLDP-IFRKQTMGIW 452
Query: 88 KACSNPSIVRSLFSATLPDFVEEL------------ARSIMHDAVRVIVGRKNTASESIK 135
+AC++P++ + +SAT+ +E L +R++VG K+TA +I
Sbjct: 453 RACTHPNLGMTCWSATMASNIEALLTKHIDKRAKRTPEQTPKPLIRLVVGLKDTAVPNIT 512
Query: 136 QKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKERAKELYGELAFD---- 183
KL++ +E GKLLALRQ S A+S L PP L+F Q+ ERA+ L+ EL +D
Sbjct: 513 HKLIYTATEPGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIERAQALHDELKYDIPLE 572
Query: 184 ---GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
R V+HS L + R + FR+G+ WVLI TDV+ARG+DF GVN V+NYD P S
Sbjct: 573 AGGSARVAVLHSSLPDSVRSKIMARFRSGEVWVLITTDVLARGVDFAGVNGVVNYDVPVS 632
Query: 241 GAAYIHR 247
AAY+HR
Sbjct: 633 AAAYVHR 639
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
+++I+TP RL + R +L R YLVLDEAD++ ++G I +++ P
Sbjct: 356 EVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG-FEPQIRKIIEQI-RPDRQVL 413
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSF 155
++SAT P V+ LA +HD +++ +G N +A+ +I Q + G +EGKLL+L +
Sbjct: 414 MWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLSLLKEI 473
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ +N ++IFV++K++ ++L + DG A IH D SQ++R+ + DFR GK+ +L+
Sbjct: 474 SSDVNSKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKSTILV 533
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + V VIN+D+P+S YIHRI
Sbjct: 534 ATDVAARGLDVEDVKYVINFDYPNSSEDYIHRI 566
>gi|443727317|gb|ELU14120.1| hypothetical protein CAPTEDRAFT_224610 [Capitella teleta]
Length = 830
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 5/220 (2%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DLSK C +L++TP RL + R K+ + R+ +LVLDEAD++ ++G I +V+ +
Sbjct: 468 DLSK-GCHLLVATPGRLVDMMERGKVGVERIRFLVLDEADRMLDMG-FEPQIRRIVEKDN 525
Query: 92 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P +FSAT P ++ LAR +HD + + VGR + SE+I QK+V+ + +
Sbjct: 526 MPVTGDRQTLMFSATFPKEIQMLARDFLHDYIFLAVGRVGSTSENITQKVVWVEDNDKRS 585
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G AG IH D SQ +RE+A+ FR+
Sbjct: 586 FLLDLLNASGPDSLTLVFVETKKGADSLEYFLYTEGYPAGSIHGDRSQREREDALKTFRS 645
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 646 GKTPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 685
>gi|320586124|gb|EFW98803.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 860
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 140/271 (51%), Gaps = 71/271 (26%)
Query: 39 DILISTPLRLRLAIR----RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK------ 88
DIL++TPL L ++ ++K L V LVLDEAD L +DP+ +
Sbjct: 433 DILVTTPLMLLNSLSGGSAKQKKTLPTVRTLVLDEADVL---------LDPLFREQTLGL 483
Query: 89 --ACSNPSIVRSLFSATLPDFVEELARSIMHDA----------------------VRVIV 124
AC++P + + +SAT+ VEEL + A VR++V
Sbjct: 484 WGACTHPQLQATFWSATMASNVEELVAKQLGSAAEKGETAAAGKKGMTINKSRLLVRLVV 543
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQ--------------------SFAES-LNPPV 163
G K+TA ++ +LV+ +E+GKLLA+RQ + AE+ L PP
Sbjct: 544 GLKDTAVPNVTHRLVYTATEQGKLLAMRQLLHPTTSVSVTGQGQKSSGAATAETPLRPPF 603
Query: 164 LIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
L+F Q+ ERA L+ EL +D R GV+H+ L+ R V FRAG+ WVLI
Sbjct: 604 LVFAQTAERATALHDELKYDIPAAAGGADRLGVLHAALADGARAAVVRRFRAGEVWVLIT 663
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 664 TDVLARGIDFAGVNGVVNYDVPGSAAAYVHR 694
>gi|290994831|ref|XP_002680035.1| ATP-dependent RNA helicase [Naegleria gruberi]
gi|284093654|gb|EFC47291.1| ATP-dependent RNA helicase [Naegleria gruberi]
Length = 629
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 129/215 (60%), Gaps = 8/215 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI-- 95
CDIL++TP RL I R I L V+YLVLDEAD++ ++G I +V+ P+
Sbjct: 287 CDILVATPGRLVDLIDRGSISLHNVQYLVLDEADRMLDMG-FEPQIRYIVEKTGMPAPGQ 345
Query: 96 -VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ- 153
+ +FSAT P ++ LAR +H+ + + VGR + E+I QK V+ +E + L L
Sbjct: 346 RITLMFSATFPKNIQTLARDFLHNNLNLTVGRVGSTHENILQKFVYCKDDEKRDLMLEAI 405
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ E+L L+FV++K+ A L L +G ++ IH D +Q +RE A+++FR G T +
Sbjct: 406 ASVETL---TLVFVKTKKEASILEYFLMKNGFKSSSIHGDKTQRERETALENFRRGITPI 462
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV +RG+D V VINYD P++ Y+HRI
Sbjct: 463 LVATDVASRGLDINDVGHVINYDLPENIEDYVHRI 497
>gi|452844381|gb|EME46315.1| hypothetical protein DOTSEDRAFT_70342 [Dothistroma septosporum
NZE10]
Length = 323
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 112/184 (60%), Gaps = 33/184 (17%)
Query: 98 SLFSATLPDFVEELARSIMHDA-----------------VRVIVGRKNTASESIKQKLVF 140
SL+SAT+ +EELARS ++ VR++VG K++A +++ +LV+
Sbjct: 4 SLWSATMGSNIEELARSTINTRFERMSQECKPDVFAAPLVRLVVGLKDSAIPNVQHRLVY 63
Query: 141 AGSEEGKLLALRQ---------SFAESLNPPVLIFVQSKERAKELYGELAFD------GI 185
A SE+GKL+ LRQ L PP L+F Q+ ERA L+ EL +D GI
Sbjct: 64 AASEQGKLMGLRQLLHPAAISKDVGSPLLPPFLVFTQTIERAVALHSELVYDIPAEAGGI 123
Query: 186 -RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R V+HSDLS T R+N + FR G+ W+LI TD+++RG+DF+GVN V+NYD P S AAY
Sbjct: 124 SRIAVLHSDLSDTARDNVMTGFRKGEIWILITTDLLSRGVDFRGVNGVVNYDIPTSSAAY 183
Query: 245 IHRI 248
+HRI
Sbjct: 184 VHRI 187
>gi|170053024|ref|XP_001862487.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167873709|gb|EDS37092.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 935
Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 131/213 (61%), Gaps = 5/213 (2%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
+++I+TP RL + R +L R YLVLDEAD++ ++G I +++ P
Sbjct: 380 EVVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMG-FEPQIRKIIEQI-RPDRQVL 437
Query: 99 LFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSF 155
++SAT P V+ LA +HD +++ VG N +A+ +I Q + +EGKLL+L +
Sbjct: 438 MWSATWPKEVQALAEDFLHDYIQINVGSLNLSANHNIHQIVDICEENEKEGKLLSLLKEI 497
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
A +N ++IFV++K++ ++L + DG A IH D SQ++R+ + DFR GK+ +L+
Sbjct: 498 ASDVNNKIIIFVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVLQDFRHGKSTILV 557
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + V VIN+D+P+S YIHRI
Sbjct: 558 ATDVAARGLDVEDVKYVINFDYPNSSEDYIHRI 590
>gi|260433348|ref|ZP_05787319.1| dead/deah box helicase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417176|gb|EEX10435.1| dead/deah box helicase [Silicibacter lacuscaerulensis ITI-1157]
Length = 416
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R +DL V LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRGAVDLGSVRRLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EEL+R+ + + RV V A++ I Q + F S+ GK LRQ
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSVHFV-SKPGKPEKLRQI 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + L+F ++K A++L L DG A IH + SQ QR+ A+ FRAG+ VL
Sbjct: 240 LSQDTDALTLVFARTKHGAEKLMKGLVADGYNAASIHGNKSQGQRDRAIKAFRAGEITVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV VINYD P+ Y+HRI
Sbjct: 300 VATDVAARGIDIPGVAYVINYDLPEVPDNYVHRI 333
>gi|255713704|ref|XP_002553134.1| KLTH0D09746p [Lachancea thermotolerans]
gi|238934514|emb|CAR22696.1| KLTH0D09746p [Lachancea thermotolerans CBS 6340]
Length = 621
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R +I L ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 282 GCDLLVATPGRLSDLLERGRISLCNIKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPSVD 340
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D V + VGR + SE+I Q +++ + K AL
Sbjct: 341 ERQTLMFSATFPMDIQHLARDFLKDYVFLSVGRVGSTSENITQHVLYV-EDMDKKSALLD 399
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A S + LIFV++K A L L +RA IH D SQ++RE A+ FR+GK +
Sbjct: 400 LLAASDDGLTLIFVETKRMADALTDFLIMQNLRATAIHGDRSQSERERALAAFRSGKASL 459
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P+ Y+HRI
Sbjct: 460 LVATAVAARGLDIPNVTHVINYDLPNDIDDYVHRI 494
>gi|401842749|gb|EJT44825.1| DED1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 609
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 279 GCDLLVATPGRLNDLLERGKISLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 337
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 338 ARQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 397
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 398 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGTA 454
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 455 SLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 491
>gi|253743371|gb|EES99785.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 553
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q R CK+LA + + L +KE V + LS D+L++TPL L + +
Sbjct: 177 LADQVARVCKQLAPSFR-TVLLQRKETVTQSLLSSKKHDVLVATPLVLLNFLTEGLVRFP 235
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKA-----------CSNPSIVRSLFSATLPDFVE 109
++ +VLDE D L ++ ID V++ C V +LFSA++ D V
Sbjct: 236 NLQTIVLDEVDCLMN-PQFIEQIDAVLEWILKTNTNTGNYCPTTRPVFTLFSASVTDQVF 294
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
L + + D V++ + + ++KQ +FAG + K+ L+Q+ E PPVL+F +
Sbjct: 295 GLVNTFLVDPVQISIAGAGMPTNTVKQYFMFAGRDRYKMFTLQQAIMEHGKPPVLVFAST 354
Query: 170 KERAKELYGEL-AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+R +Y EL + G +H+ L++ QR V FRA + W+L+ TDV+ARG+DF
Sbjct: 355 SDRVFTIYRELICYVDWPTGYLHAGLTKNQRHEIVTKFRAAELWILVCTDVLARGLDFPR 414
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+ VIN+D P YIHRI
Sbjct: 415 IGLVINFDIPSDLTHYIHRI 434
>gi|380489668|emb|CCF36550.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 707
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 125/243 (51%), Gaps = 42/243 (17%)
Query: 38 CDILISTPLR----LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TP L L V L+LDEAD L +DP+ +
Sbjct: 346 ADILVTTPALFFNFLTSGSPTTNRKLPNVTSLILDEADVL---------LDPLFREQTMA 396
Query: 89 ---ACSNPSIVRSLFSATLPDFVEEL------ARSIMHDAVRVIVGRKNTASESIKQKLV 139
AC NP++ + +SAT +E L A+ +R++VG K+TA ++ KLV
Sbjct: 397 IWSACPNPALRTTFWSATFGSNIETLVTEAQSAKPEPKPLIRLVVGLKDTAVPNVTHKLV 456
Query: 140 FAGSEEGKLLALRQSF--------AESLNPPVLIFVQSKERAKELYGELAFD-------G 184
+ +E+GKLL LRQ L PP L+F Q+ ERA L EL +D
Sbjct: 457 YTATEKGKLLGLRQLLHPTAGDDSGPPLRPPFLVFTQTIERATALEEELKYDIPLAAGGA 516
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R +HS L+ R + + FRAG+ W+LI TDV+ARG+DF GVN V+NYD P S AAY
Sbjct: 517 TRIAALHSGLADRARADIMRRFRAGEVWILITTDVLARGVDFAGVNGVVNYDVPGSSAAY 576
Query: 245 IHR 247
+HR
Sbjct: 577 VHR 579
>gi|367009202|ref|XP_003679102.1| hypothetical protein TDEL_0A05590 [Torulaspora delbrueckii]
gi|359746759|emb|CCE89891.1| hypothetical protein TDEL_0A05590 [Torulaspora delbrueckii]
Length = 597
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 139/255 (54%), Gaps = 11/255 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LATQ E KK + + ++ + + + CD+L++TP RL + R KI
Sbjct: 235 LATQIFDEAKKFTYRSWVRATVVYGGADVGSQMRELDRGCDLLVATPGRLNDLLERGKIS 294
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
L++V+YLVLDEAD++ ++G I +V+ C P + +FSAT P ++ LAR
Sbjct: 295 LAKVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPGVEDRQTLMFSATFPVDIQHLARDF 353
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPPVLIFVQSKERA 173
+ D + + VGR + SE+I Q +++ E+ K LL L S + L LIFV++K A
Sbjct: 354 LSDYIFLSVGRVGSTSENITQHVLYVEDEDKKSALLDLISSATDGL---TLIFVETKRMA 410
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+L L A IH D +Q +RE A+ FR+GK +L+AT V ARG+D V VI
Sbjct: 411 DQLTDFLIMQNFAATAIHGDRTQGERERALAAFRSGKANLLVATAVAARGLDIPNVTHVI 470
Query: 234 NYDFPDSGAAYIHRI 248
NYD P Y+HRI
Sbjct: 471 NYDLPSDVDDYVHRI 485
>gi|401623547|gb|EJS41643.1| ded1p [Saccharomyces arboricola H-6]
Length = 620
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C +
Sbjct: 283 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 341
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+ +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 342 KRQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 401
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 402 LSATTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGDA 458
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 459 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 495
>gi|378731315|gb|EHY57774.1| ATP dependent RNA helicase [Exophiala dermatitidis NIH/UT8656]
Length = 692
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 131/258 (50%), Gaps = 53/258 (20%)
Query: 38 CDILISTPLRLRLAI--------RRKKIDLSRVEYLVLDEAD----KLFEVGNLLKHIDP 85
DIL+STPL L A+ + L +VE L+ DEAD LF L
Sbjct: 287 ADILVSTPLSLVHALCPSWEEDETKPPQALPKVETLIFDEADVLLDPLFRSQTLA----- 341
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA--------------VRVIVGRKNTAS 131
V AC++PS+ S++SAT+ +EELA S + + +R I+G K+T+
Sbjct: 342 VWSACTSPSLQISMWSATIGSNIEELAVSTISERQKRLGIPRNQRPRLLRTIIGLKDTSL 401
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES---------------LNPPVLIFVQSKERAKEL 176
+I +L + +E GKLL +RQ + PP L+F Q+ RA+ L
Sbjct: 402 PTISHRLTYTATEAGKLLGMRQLLHPTRFTTTKGAEEDAQPPPRPPFLVFTQTIARAQSL 461
Query: 177 YGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
Y EL +D R V+HS L R + + FR GK WVLI TD+++RG+DF+GV
Sbjct: 462 YDELQYDIPASAGGSSRMAVLHSSLPDHVRASIMQKFRQGKIWVLITTDLLSRGVDFRGV 521
Query: 230 NCVINYDFPDSGAAYIHR 247
N V+NYD P + A Y+HR
Sbjct: 522 NVVVNYDIPTTVAGYVHR 539
>gi|346321679|gb|EGX91278.1| DNA/RNA helicase, DEAD/DEAH box type [Cordyceps militaris CM01]
Length = 717
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 127/240 (52%), Gaps = 33/240 (13%)
Query: 39 DILISTP-LRLRLAIRRKKID---LSRVEYLVLDEADKLFEVGNLLKHID-PVVKACSNP 93
DIL++TP L L R L V L+LDEAD L + L + V AC+N
Sbjct: 359 DILVTTPQLLLNFLTARSATTHRVLPDVRDLILDEADVLLD--ELFREATMGVWSACTNA 416
Query: 94 SIVRSLFSATLPDFVEELARSIMHDA-----------VRVIVGRKNTASESIKQKLVFAG 142
+ S +SAT+ +E L + VR++VG K+TA +I KLV+
Sbjct: 417 DLRVSFWSATMGSNIETLITDKLQSRAQRLGVQPKPFVRLVVGLKDTAVPNIVHKLVYTA 476
Query: 143 SEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD-------GIRA 187
SE+GKLLALRQ L PP L+F Q+ +RA L+ EL FD R
Sbjct: 477 SEQGKLLALRQLLHPTSADDSGPPLRPPFLVFTQTIDRAAALHEELKFDIPLEAGGAARI 536
Query: 188 GVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+HS L ++ R + + FRAG WVL+ TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 537 AALHSGLPESARASIMRAFRAGDIWVLVTTDVLARGVDFAGVNGVVNYDVPGSSAAYVHR 596
>gi|342875712|gb|EGU77427.1| hypothetical protein FOXB_12040 [Fusarium oxysporum Fo5176]
Length = 693
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 132/249 (53%), Gaps = 49/249 (19%)
Query: 38 CDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK---- 88
DIL++TP L +K+ L V L+LDEAD L +DP+ +
Sbjct: 328 ADILVTTPFLLLKFLTSGPPSTQKV-LPTVRDLILDEADVL---------LDPLFRDAMM 377
Query: 89 ----ACSNPSIVRSLFSATLPDFVEEL--------ARSI---MHDAVRVIVGRKNTASES 133
AC+NP + S +SAT+ +E + A+S+ VR++VG K+TA +
Sbjct: 378 SDWTACTNPDLRVSFWSATMGSNIESMVTEKLTSRAQSLGITPKPFVRLVVGLKDTAVPN 437
Query: 134 IKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD-- 183
I KL++ +E+GKLLALRQ L PP L+F Q+ +RA L+ EL +D
Sbjct: 438 IAHKLIYTATEQGKLLALRQLLHPTAADDSGPPLRPPFLVFTQTIDRATALHEELQYDIP 497
Query: 184 -----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
R +HS L+ + R + + FRAG WVLI TDV+ARG+DF GVN V+NYD P
Sbjct: 498 LEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWVLITTDVLARGVDFAGVNGVVNYDVP 557
Query: 239 DSGAAYIHR 247
S A Y+HR
Sbjct: 558 GSSAGYVHR 566
>gi|403217071|emb|CCK71566.1| hypothetical protein KNAG_0H01520 [Kazachstania naganishii CBS
8797]
Length = 621
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L+ ++YL LDEAD++ ++G I +V+ C P +
Sbjct: 271 GCDLLVATPGRLNDLLERGKISLANIKYLTLDEADRMLDMG-FEPQIRHIVEDCDMPPVN 329
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR ++D + + VGR + SE+I QK+++ + K LL L
Sbjct: 330 ERQTLMFSATFPRDIQHLARDFLNDYIFLSVGRVGSTSENITQKVLYVDDMDKKSALLDL 389
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
S L LIFV++K A +L L IRA IH D +Q +RE A+ F++G
Sbjct: 390 LSSTKGGL---TLIFVETKRMADQLTDFLIMQNIRATAIHGDRTQMERERALGAFKSGTA 446
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+AT V ARG+D V VINYD P Y+HRI
Sbjct: 447 DVLVATAVAARGLDIPNVTLVINYDLPGDIDDYVHRI 483
>gi|322712055|gb|EFZ03628.1| hypothetical protein MAA_00702 [Metarhizium anisopliae ARSEF 23]
Length = 699
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 130/248 (52%), Gaps = 47/248 (18%)
Query: 38 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK----- 88
DIL++TP L + L V L+LDEAD L +DP+ +
Sbjct: 334 TDILVTTPALLLNFLTAGPSGSQKVLPTVRELILDEADVL---------LDPLFREKTLS 384
Query: 89 ---ACSNPSIVRSLFSATLPDFVEELARSIMHDA-----------VRVIVGRKNTASESI 134
AC+N + S +SAT+ +E L + D +R++VG K+TA ++
Sbjct: 385 LWTACTNSGLRLSFWSATMGSNIEALVTEKLKDRAEALGITPKPFIRLVVGLKDTAVPNV 444
Query: 135 KQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD--- 183
KL +A SE+GKLLALRQ + L PP L+F Q+ +RA L+ EL +D
Sbjct: 445 VHKLTYAASEQGKLLALRQLLHPAGSDGSEQPLRPPFLVFTQTIDRAMALHEELKYDIPL 504
Query: 184 ----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
R +HS L+ + R + + FRAG+ WVLI TDV+ARG+DF GVN V+NYD P
Sbjct: 505 EAGGPSRIAALHSALADSARSSIMRKFRAGEIWVLITTDVLARGVDFAGVNGVVNYDVPG 564
Query: 240 SGAAYIHR 247
S AAY+HR
Sbjct: 565 SAAAYVHR 572
>gi|320583085|gb|EFW97301.1| ATP-dependent RNA helicase DED1 [Ogataea parapolymorpha DL-1]
Length = 2471
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 134/229 (58%), Gaps = 7/229 (3%)
Query: 26 ELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 85
E+ D K CD+L++TP RL + R KI L ++YLVLDEAD++ ++G ++ I
Sbjct: 257 EVYLQMDQLKQGCDLLVATPGRLNDLLERGKISLKNIKYLVLDEADRMLDMGFEIQ-IRH 315
Query: 86 VVKACSNPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 142
+++ C P +FSAT P ++ +A+ +H+ + + VGR + SE+I Q++++
Sbjct: 316 IIQGCDMPPPGERQTLMFSATFPKEIQLMAKDFLHNYIFLSVGRVGSTSENITQRILYVE 375
Query: 143 SEEGK--LLALRQSFAESL-NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQR 199
+E K LL + S ++L N LIFV++K+ A L L A IH D SQ +R
Sbjct: 376 DDEKKSSLLDILTSTEDTLANGLTLIFVETKKMADILSDFLINQDFPATSIHGDRSQYER 435
Query: 200 ENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
E A++ FR G+T +L+AT V ARG+D V V+NYD P+ Y+HRI
Sbjct: 436 ERALESFRTGRTPILVATAVAARGLDIPNVTHVVNYDLPNDIDDYVHRI 484
>gi|322695946|gb|EFY87746.1| hypothetical protein MAC_06232 [Metarhizium acridum CQMa 102]
Length = 699
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 132/249 (53%), Gaps = 49/249 (19%)
Query: 38 CDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK---- 88
DIL++TP L + +K+ L V L+LDEAD L +DP+ +
Sbjct: 334 TDILVTTPALLLNFLTAGSSGTQKV-LPTVRELILDEADVL---------LDPLFREQTL 383
Query: 89 ----ACSNPSIVRSLFSATLPDFVEELARSIMHDA-----------VRVIVGRKNTASES 133
AC+N + S +SAT+ +E L + D +R++VG K+TA +
Sbjct: 384 SLWTACTNSGLRLSFWSATMGSNIEALVTEKLKDRAEALGITPKPFIRLVVGLKDTAVPN 443
Query: 134 IKQKLVFAGSEEGKLLALRQSF--------AESLNPPVLIFVQSKERAKELYGELAFD-- 183
+ KL +A SE+GKLLALRQ L PP L+F Q+ +RA L+ EL +D
Sbjct: 444 VVHKLTYAASEQGKLLALRQLLHPAGGDDSGPPLRPPFLVFTQTIDRAMALHDELKYDIP 503
Query: 184 -----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
R +HS L+ + R + + FRAG+ WVLI TDV+ARG+DF GVN V+NYD P
Sbjct: 504 LEAGGPSRIAALHSALADSARSSIMRKFRAGEIWVLITTDVLARGVDFAGVNGVVNYDVP 563
Query: 239 DSGAAYIHR 247
S AAY+HR
Sbjct: 564 GSAAAYVHR 572
>gi|260428461|ref|ZP_05782440.1| putative ATP-dependent RNA helicase RhlE [Citreicella sp. SE45]
gi|260422953|gb|EEX16204.1| putative ATP-dependent RNA helicase RhlE [Citreicella sp. SE45]
Length = 430
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L Q ++L +G K ++ + + + R + DIL++TP RL + RK +D
Sbjct: 87 LVNQIAESLRQLTEGTKLRVGTVVGGQSINRQINFLSRGTDILVATPGRLIDLMDRKSVD 146
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+ LVLDEAD++ ++G + L+ I P + LFSAT+P +EEL+ + +
Sbjct: 147 LSQTRQLVLDEADQMLDLGFIHALRKIAPKLGTPRQ----TMLFSATMPKQMEELSAAYL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ RV V A++ I Q + F G ++ K LR+ + L+ L+F ++K A+ L
Sbjct: 203 TNPRRVQVSPPGKAADKITQSVHFLGKDD-KPRKLREVLRQDLDALTLVFSRTKHGAERL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L DG A IH + SQ QR+ A+ FR G VL+ATDV ARG+D GV V+NYD
Sbjct: 262 MKGLVADGFNAASIHGNKSQGQRDRAIKAFRDGDINVLVATDVAARGIDIPGVAYVVNYD 321
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 322 LPEVPDNYVHRI 333
>gi|349581361|dbj|GAA26519.1| K7_Ded1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 604
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 126/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C I
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPIG 333
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|407973411|ref|ZP_11154323.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
gi|407431252|gb|EKF43924.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
Length = 473
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 142/250 (56%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + LAK L+ + R + + + + D+LI+TP RL +R ++
Sbjct: 95 LAVQIDEVVRSLAKHAHLATALVLGGVSRGSQVRRLAQGVDVLIATPGRLTDIVRSGELS 154
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ +LVLDEAD++ ++G + + + +A +LFSAT+P +++LA S++ +
Sbjct: 155 LAETRWLVLDEADRMLDMG-FINDVRRIARATHTDRQT-ALFSATMPKEIDQLAGSLLKE 212
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+RV + R++T + IKQ L+ A + + + + L A+ V++F ++K A +
Sbjct: 213 PLRVEIARESTTAGEIKQGLIMARTRQKRKI-LSDMLADEKLRSVIVFARTKHGADRVTR 271
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG A VIH + SQ R+ A++ FR G +L+ATD+ ARG+D GV VIN+D P
Sbjct: 272 DLTRDGFEAAVIHGNKSQNARQRALNGFRDGSMRILVATDIAARGIDVPGVTHVINFDLP 331
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 332 DQPESYVHRI 341
>gi|323302935|gb|EGA56739.1| Ded1p [Saccharomyces cerevisiae FostersB]
Length = 604
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|323346404|gb|EGA80692.1| Ded1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762883|gb|EHN04415.1| Ded1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 608
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 279 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 337
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 338 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 397
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 398 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 454
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 455 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 491
>gi|323307275|gb|EGA60555.1| Ded1p [Saccharomyces cerevisiae FostersO]
Length = 605
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 276 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 334
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 335 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 394
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 395 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 451
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 452 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 488
>gi|160380641|sp|A6ZP47.1|DED1_YEAS7 RecName: Full=ATP-dependent RNA helicase DED1
gi|151945294|gb|EDN63537.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190407515|gb|EDV10782.1| hypothetical protein SCRG_01592 [Saccharomyces cerevisiae RM11-1a]
gi|207341041|gb|EDZ69208.1| YOR204Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269590|gb|EEU04872.1| Ded1p [Saccharomyces cerevisiae JAY291]
gi|323335425|gb|EGA76711.1| Ded1p [Saccharomyces cerevisiae Vin13]
gi|323352139|gb|EGA84676.1| Ded1p [Saccharomyces cerevisiae VL3]
Length = 604
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|293335107|ref|NP_001168851.1| uncharacterized protein LOC100382656 [Zea mays]
gi|223973339|gb|ACN30857.1| unknown [Zea mays]
Length = 692
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 150/316 (47%), Gaps = 79/316 (25%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS----------------------- 37
L Q E +KLA+G + ++ MKK S + +
Sbjct: 260 LVHQIVSEGQKLAQGTRLKVVSMKKHTQLSAEQVDMAEDGSEDEEDKESDSEDEEDKADD 319
Query: 38 -------CDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 85
DIL++TP L +K+ L V L+LDEAD L +DP
Sbjct: 320 KPEQITKADILVTTPFLLLKFLTSGPPSTQKV-LPTVRDLILDEADVL---------LDP 369
Query: 86 VVK--------ACSNPSIVRSLFSATLPDFVEEL--------ARSI---MHDAVRVIVGR 126
+ + AC+NP + S +SAT+ +E + A+S+ VR++VG
Sbjct: 370 LFRDAMMSDWTACTNPHLRVSFWSATMGSNIESMVTEKLTSRAQSLGITPKPFVRLVVGL 429
Query: 127 KNTASESIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYG 178
K+TA +I KL++ +E+GKLLALRQ L PP L+F Q+ +RA L+
Sbjct: 430 KDTAVPNIAHKLIYTATEQGKLLALRQLLHPTAADDSGPPLRPPFLVFTQTIDRATALHE 489
Query: 179 ELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
E+ +D R +HS L+ + R + + FRAG WVLI TDV+ARG+DF GVN
Sbjct: 490 EMQYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWVLITTDVLARGVDFAGVNG 549
Query: 232 VINYDFPDSGAAYIHR 247
V+NYD P S A Y+HR
Sbjct: 550 VVNYDVPGSSAGYVHR 565
>gi|360044575|emb|CCD82123.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 139/256 (54%), Gaps = 44/256 (17%)
Query: 37 SCDILISTPLRLR----LAIRRKKIDLSRVEYLVLDEADKLFEV------------GNLL 80
S ILISTP RL L IDLSR+ +LV+DE DK+ EV GN
Sbjct: 220 STKILISTPSRLSTLLSLPSEHCPIDLSRLSWLVVDECDKMLEVNFNDISFSNTEHGNKT 279
Query: 81 KH--------IDPVVK-----ACSNPSIVR---SLFSATLPDFVEELARSIM-------- 116
K+ + P+ + + SI R +LFSAT+PD V AR+ +
Sbjct: 280 KYRPRGFHNQVAPIFEFIQKVNLTGQSIRRPLVALFSATVPDEVVSWARNQLPVLLKLDS 339
Query: 117 --HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
++ +++ VG +N A ++KQ+L + +E+GKLL +R A L P LIF+QS++RA
Sbjct: 340 SEYELIQLRVGIRNAAVSTVKQELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDRAN 399
Query: 175 ELYGELAFDG--IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ E+ I A VI SD ++ QR + V FR G+ VLI TD++ RG+DFKGV+ V
Sbjct: 400 EILKEILLSDADILANVISSDKTEAQRASVVRAFREGQLHVLICTDLLGRGIDFKGVSMV 459
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P YIHR+
Sbjct: 460 VNYDVPPLKQEYIHRV 475
>gi|398365729|ref|NP_014847.3| Ded1p [Saccharomyces cerevisiae S288c]
gi|118411|sp|P06634.2|DED1_YEAST RecName: Full=ATP-dependent RNA helicase DED1; AltName: Full=DEAD
box protein 1
gi|3647|emb|CAA40546.1| Ded1p (Spp81p) [Saccharomyces cerevisiae]
gi|1420479|emb|CAA99419.1| DED1 [Saccharomyces cerevisiae]
gi|285815083|tpg|DAA10976.1| TPA: Ded1p [Saccharomyces cerevisiae S288c]
Length = 604
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|227524|prf||1705300A ATP dependent RNA helicase
Length = 604
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|428671740|gb|EKX72655.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 591
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 143/253 (56%), Gaps = 8/253 (3%)
Query: 1 LATQTTRECKKLAKGNKFQ-IKLMKKELVRST--DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q E +K G + + L VR DL + CD+ ++TP RL + R+KI
Sbjct: 234 LAIQIYNEARKFNFGTGIRTVVLYGGSEVRRQLYDLDR-GCDVCVATPGRLTDLLERRKI 292
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSI 115
+ V+YLVLDEAD++ ++G I +V P I R +FSAT P +++LAR
Sbjct: 293 SFTFVKYLVLDEADRMLDMG-FAPQIRAIVDNNCMPKIGRQTVMFSATFPKEIQQLARDF 351
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
++D + + VGR + +E I+Q+L++A ++ K L + E+++ VLIFV++K RA
Sbjct: 352 LNDYIYLAVGRVGSTNEFIRQRLIYADQDQ-KPKYLVKLLKENVSGLVLIFVETKRRADM 410
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
+ L + A IH D SQ RE+A+ F+ G+ +L+ATDV ARG+D + VIN
Sbjct: 411 IEAYLQRENFSAVNIHGDRSQQDREHALRLFKTGEAPILVATDVAARGLDINNITHVINC 470
Query: 236 DFPDSGAAYIHRI 248
D P + Y+HRI
Sbjct: 471 DLPTNIDDYVHRI 483
>gi|259149685|emb|CAY86489.1| Ded1p [Saccharomyces cerevisiae EC1118]
Length = 604
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>gi|392296531|gb|EIW07633.1| Ded1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 631
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 302 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 360
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 361 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 420
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 421 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 477
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 478 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 514
>gi|254509500|ref|ZP_05121567.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
gi|221533211|gb|EEE36199.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
Length = 419
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R +DLS V +LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMERGAVDLSSVRHLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EEL+R+ + + RV V A++ I Q + F + K LR+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSIHFV-EKPAKPAKLREI 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ ++ L+F ++K A++L L DG A IH + SQ QR+ A+ FRAG+ +L
Sbjct: 240 LSADMDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQRDRAIKAFRAGEINIL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV VINYD P+ Y+HRI
Sbjct: 300 VATDVAARGIDIPGVAYVINYDLPEVPDNYVHRI 333
>gi|256079519|ref|XP_002576034.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 138/258 (53%), Gaps = 48/258 (18%)
Query: 37 SCDILISTPLRLR----LAIRRKKIDLSRVEYLVLDEADKLFEV------------GNLL 80
S ILISTP RL L IDLSR+ +LV+DE DK+ EV GN
Sbjct: 220 STKILISTPSRLSTLLSLPSEHCPIDLSRLSWLVVDECDKMLEVNFNDISFSNTEHGNKT 279
Query: 81 KH--------IDPVV----------KACSNPSIVRSLFSATLPDFVEELARSIM------ 116
K+ + P+ ++ PS+ +LFSAT+PD V AR+ +
Sbjct: 280 KYRPRGFHNQVAPIFEFIQKVNLTGQSIRRPSV--ALFSATVPDEVVSWARNQLPVLLKL 337
Query: 117 ----HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
++ ++ VG +N A ++KQ+L + +E+GKLL +R A L P LIF+QS++R
Sbjct: 338 DSSEYELTQLRVGIRNAAVSTVKQELRYCATEQGKLLEMRYLLANGLAYPCLIFMQSRDR 397
Query: 173 AKELYGELAFDG--IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
A E+ E+ I A VI SD ++ QR + V FR G+ VLI TD++ RG+DFKGV+
Sbjct: 398 ANEILKEILLSDADILANVISSDKTEAQRASVVRAFREGQLHVLICTDLLGRGIDFKGVS 457
Query: 231 CVINYDFPDSGAAYIHRI 248
V+NYD P YIHR+
Sbjct: 458 MVVNYDVPPLKQEYIHRV 475
>gi|156843946|ref|XP_001645038.1| hypothetical protein Kpol_1072p50 [Vanderwaltozyma polyspora DSM
70294]
gi|160380640|sp|A7TKR8.1|DED1_VANPO RecName: Full=ATP-dependent RNA helicase DED1
gi|156115693|gb|EDO17180.1| hypothetical protein Kpol_1072p50 [Vanderwaltozyma polyspora DSM
70294]
Length = 650
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 33/266 (12%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST-------------DLSKFSCDILISTPLR 47
LATQ E KK + VR T DLS+ CD+L++TP R
Sbjct: 255 LATQIYDEAKKFTY----------RSWVRPTVVYGGSDIGSQIRDLSR-GCDLLVATPGR 303
Query: 48 LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATL 104
L + R ++ L+ V+YLVLDEAD++ ++G I +V C P + +FSAT
Sbjct: 304 LSDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRQIVDGCDMPPVGERQTLMFSATF 362
Query: 105 PDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPP 162
PD ++ LAR + D + + VG+ + SE+I Q++++ + K LL L + + L
Sbjct: 363 PDDIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVEDMDKKSTLLDLLSASNDGL--- 419
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
LIFV++K A EL L RA IH D +Q++RE A+ F+ G +L+AT V AR
Sbjct: 420 TLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSERERALAAFKNGNANLLVATAVAAR 479
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+D V V+NYD P Y+HRI
Sbjct: 480 GLDIPNVTHVVNYDLPSDIDDYVHRI 505
>gi|358253999|dbj|GAA54032.1| probable ATP-dependent RNA helicase DDX52 [Clonorchis sinensis]
Length = 719
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 48/258 (18%)
Query: 37 SCDILISTPLR----LRLAIRRKKIDLSRVEYLVLDEADKLFEV---------GNLLKH- 82
S IL++TP R L L D+S + +LVLDE DK+ EV ++H
Sbjct: 324 STRILVATPSRMAFLLSLDPSLCPFDVSNLAWLVLDEYDKMLEVDVTNANSLSSKKMRHR 383
Query: 83 -------IDPVVKACS--------NPSIVRSLFSATLPDFVEELARSIM----------- 116
I+P+ A S P++ ++FSAT+PD V A+S +
Sbjct: 384 VRSFRDQINPIFHALSKARSISGRQPNV--AMFSATVPDEVVNWAQSELPALLSPTGEQT 441
Query: 117 ----HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ V++ VG +N+A ++KQ+L + +EEGKLL +R SL P LIF++S+ER
Sbjct: 442 LSGKFELVQLCVGTRNSAVSTVKQELRYCATEEGKLLEMRYLLVRSLLYPCLIFMESRER 501
Query: 173 AKELYGELAFD--GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
AKEL E+ + A VI SD + QR + FR G+ VL+ TD++ RGMDFKGVN
Sbjct: 502 AKELIKEILLSDANVLANVISSDKTDAQRAAIIRAFREGQLNVLVCTDLLGRGMDFKGVN 561
Query: 231 CVINYDFPDSGAAYIHRI 248
V+NYD P S YIHR+
Sbjct: 562 MVVNYDLPPSKEEYIHRV 579
>gi|156083731|ref|XP_001609349.1| DEAD/DEAH box helicase [Babesia bovis T2Bo]
gi|154796600|gb|EDO05781.1| DEAD/DEAH box helicase [Babesia bovis]
Length = 609
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 139/252 (55%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKL--AKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +K G + + E+ R + CDI ++TP RL + R +I
Sbjct: 244 LAMQTFTEARKFIYNTGIRAVVLYGGGEVRRQLYELERGCDICVATPGRLTDILERNRIG 303
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSIM 116
L V YLVLDEAD++ ++G I VV+ S P R +FSAT P +++LAR +
Sbjct: 304 LHCVSYLVLDEADRMLDMG-FAPQIRQVVEHSSMPQEGRQTVMFSATFPKEIQQLARDFL 362
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
D + + VGR + +E I+Q+L++A E+ KL L + E+ N VLIFV++K RA +
Sbjct: 363 RDYLYLAVGRVGSTNEFIRQRLLYADQEQ-KLHYLVKLLRENTNGLVLIFVETKRRADMI 421
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L + A IH D SQ RE A+ F+ G+ +L+ATDV ARG+D + VIN D
Sbjct: 422 ESYLLKENFMAVNIHGDRSQQDREEALRLFKTGERPILVATDVAARGLDINNITHVINCD 481
Query: 237 FPDSGAAYIHRI 248
P + Y+HRI
Sbjct: 482 LPANIDDYVHRI 493
>gi|149240601|ref|XP_001526175.1| ATP-dependent RNA helicase ded1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013500|sp|A5DZE6.1|DED1_LODEL RecName: Full=ATP-dependent RNA helicase DED1
gi|146450298|gb|EDK44554.1| ATP-dependent RNA helicase ded1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 664
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 308 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQ 366
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K +L L
Sbjct: 367 DRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDL 426
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ +E L ++F ++K A L L G A IH D SQ +RE A+ F++G+
Sbjct: 427 LNANSEGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGQA 483
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 484 PILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 520
>gi|407776571|ref|ZP_11123844.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
gi|407301862|gb|EKF20981.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
Length = 456
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 145/250 (58%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q ++L+ L+ + R + + + + D++I+TP RL +R ++
Sbjct: 95 LAVQIDEVVRQLSHHAHLSTALVLGGVSRGSQVRRLAQGVDVVIATPGRLTDLVRSGELS 154
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ +LVLDEAD++ ++G + + + +A ++ +LFSAT+P +E+LA S++ +
Sbjct: 155 LAETRWLVLDEADRMLDMG-FINDVRRIARA-THADRQTALFSATMPREIEQLAASLLKE 212
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V +++T + I Q+LV A +++ K L A+ V++F ++K A +
Sbjct: 213 PVRVEVAKQSTTAVEITQRLVMARTKQ-KRKVLSDMLADETMRSVIVFARTKHGADRVTR 271
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L DG A VIH + SQ R+ A++ FR G +L+ATD+ ARG+D G++ V+N+D P
Sbjct: 272 DLERDGFEAAVIHGNKSQNARQRALNGFRDGSVRILVATDIAARGIDVPGISHVVNFDLP 331
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 332 DQPESYVHRI 341
>gi|83950175|ref|ZP_00958908.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
gi|83838074|gb|EAP77370.1| putative ATP-dependent RNA helicase protein [Roseovarius
nubinhibens ISM]
Length = 431
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 136/252 (53%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L Q + L G + ++ + + + R DIL++TP RL + R+ +D
Sbjct: 87 LVNQIADSLRNLTDGTRLRVATVVGGQSINRQITFLARGTDILVATPGRLIDLMDRRAVD 146
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
L V +LVLDEAD++ ++G + L+ I P + LFSAT+P +EEL+R+ +
Sbjct: 147 LGSVRHLVLDEADQMLDLGFIHALRKIAPRLGTPRQ----TMLFSATMPKQMEELSRAYL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +V V A++ I Q + F + K LR+ + ++ L+F ++K A++L
Sbjct: 203 ENPRKVQVSPPGKAADKITQSVHFL-EKPAKPSKLREILSRDMDALTLVFSRTKHGAEKL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L DG A IH + SQ QR+ A+ FRAG+ VL+ATDV ARG+D GV VINYD
Sbjct: 262 MKGLVADGYNAASIHGNKSQGQRDRAIKAFRAGEINVLVATDVAARGIDIPGVAYVINYD 321
Query: 237 FPDSGAAYIHRI 248
PD Y+HRI
Sbjct: 322 LPDVPDNYVHRI 333
>gi|346994009|ref|ZP_08862081.1| DEAD/DEAH box helicase-like protein [Ruegeria sp. TW15]
Length = 419
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R +DL V++LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRGAVDLGSVKHLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EEL+R+ + + RV V A++ I Q + F + K LR+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTNPQRVQVSPPGKAADKITQSIHFV-EKPAKPAKLREI 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ ++ L+F ++K A++L L DG A IH + SQ QR+ A+ FRAG+ VL
Sbjct: 240 LSADMDALTLVFSRTKHGAEKLMKGLVADGFNAASIHGNKSQGQRDRAIKAFRAGEINVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV VINYD P+ Y+HRI
Sbjct: 300 VATDVAARGIDIPGVAYVINYDLPEVPDNYVHRI 333
>gi|400603078|gb|EJP70676.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 731
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 128/242 (52%), Gaps = 38/242 (15%)
Query: 39 DILISTPLRLRLAIRRKKIDLSR----VEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
DIL++TP L + R V L+LDEAD L + + V AC+N
Sbjct: 360 DILVTTPQLLLNFLTSGPATTHRILPDVRDLILDEADVLLDA-LFYEQTMGVWSACTNTD 418
Query: 95 IVRSLFSATLPDFVEELARSIMHDA---------------VRVIVGRKNTASESIKQKLV 139
+ S +SAT+ +E +IM D VR++VG K+TA +I KL
Sbjct: 419 LRVSFWSATMGSNIE----AIMTDKLQSRAKGLGVRRKPFVRLVVGLKDTAVPNIVHKLT 474
Query: 140 FAGSEEGKLLALRQSFAES-------LNPPVLIFVQSKERAKELYGELAFD-------GI 185
+ SE+GKLLALRQ + L PP ++F Q+ +RA L+ EL +D
Sbjct: 475 YTASEQGKLLALRQLLHPTTADDSVPLRPPFIVFTQTIDRAAALHEELKYDIPLEAGGST 534
Query: 186 RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYI 245
R +HS L ++ R + + FRAG+ WVLI TDV+ARG+DF GVN V+NYD P S AAY+
Sbjct: 535 RIAALHSGLPESARASIMRKFRAGEIWVLITTDVLARGVDFAGVNGVVNYDVPGSSAAYV 594
Query: 246 HR 247
HR
Sbjct: 595 HR 596
>gi|408788051|ref|ZP_11199774.1| ATP-dependent RNA helicase [Rhizobium lupini HPC(L)]
gi|424911054|ref|ZP_18334431.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392847085|gb|EJA99607.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408486129|gb|EKJ94460.1| ATP-dependent RNA helicase [Rhizobium lupini HPC(L)]
Length = 490
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 163
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + +LA S + D ++V V A++
Sbjct: 164 LGFIHDLRKISKMVPAKRQ----TLLFSATMPKAIADLAHSYLTDPLKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 220 VEQYVHFVAGKNDKTELLKKSLNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 334
>gi|340516948|gb|EGR47194.1| predicted protein [Trichoderma reesei QM6a]
Length = 713
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 118/223 (52%), Gaps = 43/223 (19%)
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEE 110
L V L+LDEAD L +DP+ + ACSNP + S +SAT+ +E
Sbjct: 371 LPTVRDLILDEADVL---------LDPLFREQTLGIWAACSNPDLRLSFWSATMGSNIET 421
Query: 111 L--------ARSI---MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF---- 155
L A S+ VR++VG K+TA +I +L++ SE+GKLLALRQ
Sbjct: 422 LVTERLTSRAESLGIPQRPLVRLVVGLKDTAVPNIVHRLIYTASEQGKLLALRQLLRPTS 481
Query: 156 ----AESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVD 204
L PP L+F Q+ ERA L EL +D R +HS L R +
Sbjct: 482 SIDSGPPLRPPFLVFTQTIERAAALQEELKYDIPLEAGGSSRIAALHSGLPDAARAAIMR 541
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
FRAG+ WVLI TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 542 KFRAGEIWVLITTDVLARGVDFAGVNGVLNYDVPGSSAAYVHR 584
>gi|325293690|ref|YP_004279554.1| dead-box ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
gi|325061543|gb|ADY65234.1| dead-box ATP-dependent RNA helicase [Agrobacterium sp. H13-3]
Length = 500
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 124 NKQQLQLEK------------GTDVLVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 171
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + ELA + + D ++V V A++
Sbjct: 172 LGFIHDLRKISKMVPAKRQ----TLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADK 227
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 228 VEQYVHFVAGKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 287
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 288 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 342
>gi|335034320|ref|ZP_08527671.1| ATP-dependent RNA helicase [Agrobacterium sp. ATCC 31749]
gi|333794285|gb|EGL65631.1| ATP-dependent RNA helicase [Agrobacterium sp. ATCC 31749]
Length = 502
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 128 NKQQLQLEK------------GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 175
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V P LFSAT+P + ELA + + D ++V V A++
Sbjct: 176 LGFIHDLRKISRMVP----PKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADK 231
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 232 VEQYVHFVAGKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 291
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 292 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 346
>gi|418407317|ref|ZP_12980635.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
gi|358006461|gb|EHJ98785.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens 5A]
Length = 492
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDVLVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 163
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + ELA + + D ++V V A++
Sbjct: 164 LGFIHDLRKISKMVPAKRQ----TLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 220 VEQYVHFVAGKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 334
>gi|15889610|ref|NP_355291.1| ATP-dependent RNA helicase [Agrobacterium fabrum str. C58]
gi|15157502|gb|AAK88076.1| ATP-dependent RNA helicase [Agrobacterium fabrum str. C58]
Length = 502
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 128 NKQQLQLEK------------GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 175
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V P LFSAT+P + ELA + + D ++V V A++
Sbjct: 176 LGFIHDLRKISRMVP----PKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADK 231
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 232 VEQYVHFVAGKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 291
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 292 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 346
>gi|407799857|ref|ZP_11146735.1| DEAD/DEAH box helicase [Oceaniovalibus guishaninsula JLT2003]
gi|407058334|gb|EKE44292.1| DEAD/DEAH box helicase [Oceaniovalibus guishaninsula JLT2003]
Length = 429
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 138/252 (54%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q + A G + ++ + + + + D+L++TP RL + R+ +
Sbjct: 86 LANQIAENLRDYAGGTHLSVAIVVGGVSINRQIGRLERGVDLLVATPGRLIDLLDRRAVR 145
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
L +LVLDEAD++ ++G + L+ I P++ LFSAT+P + E+A S +
Sbjct: 146 LDETRFLVLDEADQMLDMGFIHALRRIAPLLAKERQ----TMLFSATMPKLMNEIANSYL 201
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +R+ V R A++ ++Q++ F S++GK LR+ + L+F ++K A++L
Sbjct: 202 MNPIRIEVARPGQAADKVEQEVHFV-SKDGKTDLLREMLNKHPGDRALVFARTKHGAEKL 260
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L DG +A IH + SQ QR+ A+ F+ G VL+ATDV ARG+D GV V NYD
Sbjct: 261 MKQLDRDGYKAASIHGNKSQGQRDRAIAGFKEGSILVLVATDVAARGIDIPGVEYVYNYD 320
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 321 LPNVAENYVHRI 332
>gi|410081586|ref|XP_003958372.1| hypothetical protein KAFR_0G02030 [Kazachstania africana CBS 2517]
gi|372464960|emb|CCF59237.1| hypothetical protein KAFR_0G02030 [Kazachstania africana CBS 2517]
Length = 606
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 126/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 271 GCDLLVATPGRLSDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMTPVG 329
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I Q++++ E+ K LL L
Sbjct: 330 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQRVLYVEDEDKKSALLDL 389
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ E L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 390 LAASDEGL---TLIFVETKRLADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 446
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 447 NLLVATAVAARGLDIPNVTHVINFDLPSDIDDYVHRI 483
>gi|46107990|ref|XP_381053.1| hypothetical protein FG00877.1 [Gibberella zeae PH-1]
gi|91207748|sp|Q4IPI1.1|ROK1_GIBZE RecName: Full=ATP-dependent RNA helicase ROK1
Length = 693
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 133/250 (53%), Gaps = 49/250 (19%)
Query: 37 SCDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK--- 88
+ DIL++TP L +K+ L V L+LDEAD L +DP+ +
Sbjct: 327 TPDILVTTPFLLFKFLTSGPPSTQKV-LPTVRDLILDEADVL---------LDPLFRDAT 376
Query: 89 -----ACSNPSIVRSLFSATLPDFVEEL------ARSIMHDA-----VRVIVGRKNTASE 132
AC+N ++ S +SAT+ +E + +R+ D VR++VG K+TA
Sbjct: 377 MADWTACTNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITPKPFVRLVVGLKDTAVP 436
Query: 133 SIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD- 183
+I KL++ SE+GKLLALRQ L PP L+F Q+ +RA L+ EL +D
Sbjct: 437 NIAHKLIYTASEQGKLLALRQLLHPTASDDSGPPLRPPFLVFTQTIDRATALHEELQYDI 496
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R +HS L+ + R + + FRAG W+LI TDV+ARG+DF GVN V+NYD
Sbjct: 497 PLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLARGVDFAGVNGVVNYDV 556
Query: 238 PDSGAAYIHR 247
P S A Y+HR
Sbjct: 557 PGSSAGYVHR 566
>gi|408388502|gb|EKJ68186.1| hypothetical protein FPSE_11653 [Fusarium pseudograminearum CS3096]
Length = 693
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 133/250 (53%), Gaps = 49/250 (19%)
Query: 37 SCDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK--- 88
+ DIL++TP L +K+ L V L+LDEAD L +DP+ +
Sbjct: 327 TPDILVTTPFLLFKFLTSGPPSTQKV-LPTVRDLILDEADVL---------LDPLFRDAT 376
Query: 89 -----ACSNPSIVRSLFSATLPDFVEEL------ARSIMHDA-----VRVIVGRKNTASE 132
AC+N ++ S +SAT+ +E + +R+ D VR++VG K+TA
Sbjct: 377 MADWTACTNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITPKPFVRLVVGLKDTAVP 436
Query: 133 SIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD- 183
+I KL++ SE+GKLLALRQ L PP L+F Q+ +RA L+ EL +D
Sbjct: 437 NIAHKLIYTASEQGKLLALRQLLHPTASDDSGPPLRPPFLVFTQTIDRATALHEELQYDI 496
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R +HS L+ + R + + FRAG W+LI TDV+ARG+DF GVN V+NYD
Sbjct: 497 PLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLARGVDFAGVNGVVNYDV 556
Query: 238 PDSGAAYIHR 247
P S A Y+HR
Sbjct: 557 PGSSAGYVHR 566
>gi|399216152|emb|CCF72840.1| unnamed protein product [Babesia microti strain RI]
Length = 561
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 10/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQ-IKLMKKELVRST--DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q E +K G + + L VR+ DL K CD+ ++TP RL + R+K+
Sbjct: 216 LAIQIYNEARKFNFGTGIRTVVLYGGSEVRAQLFDLEK-GCDVCVATPGRLTDLVERRKV 274
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS----LFSATLPDFVEELAR 113
+ + V+YLVLDEAD++ ++G I +V+ P+ + +FSAT P ++ LA+
Sbjct: 275 NFTSVKYLVLDEADRMLDMG-FSPQIRAIVEDNGMPTSMEGRQTVMFSATFPREIQILAK 333
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ D + + VGR + +E I+Q++ +AG ++ K L + E+ N VLIFV++K RA
Sbjct: 334 DFLRDYIYLTVGRVGSTNEFIRQRVQYAGQDQ-KAKYLVKLLNENSNGLVLIFVETKRRA 392
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+ L + A IH D SQ RE A+ F+ GK +L+ATDV ARG+D + VI
Sbjct: 393 DMIEAYLLNENFLAVSIHGDRSQQDREEALRLFKTGKRPILVATDVAARGLDISNITHVI 452
Query: 234 NYDFPDSGAAYIHRI 248
N D P + Y+HRI
Sbjct: 453 NCDLPSNIDDYVHRI 467
>gi|328855503|gb|EGG04629.1| hypothetical protein MELLADRAFT_88697 [Melampsora larici-populina
98AG31]
Length = 680
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 29/243 (11%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
L CD+LISTPL+L IR LS + +LVLDE D+L + + L+ +D +++
Sbjct: 330 LPSTGCDVLISTPLKLLYHIRDSPESLSHITHLVLDEVDQLLDKSSFLEQVDQILEILKQ 389
Query: 93 PS--------IVRSLFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAG 142
+ + + + SAT+ VEEL++S+M A VR+++G+K+ A +KQ+L +
Sbjct: 390 ATTTNQETKVVQKVMMSATISSEVEELSKSVMSSARFVRLLIGQKHAAPNKVKQRLDYVD 449
Query: 143 SEEGKL----LALRQ-----SFAESLNPPVLIFVQSKERA--------KELYGELAFDGI 185
SE KL LR S E L PPVLIF QS ER +EL G + + I
Sbjct: 450 SEASKLSHFVTLLRNNNNTLSKVEKLCPPVLIFCQSAERVEELSKILRRELIGTVKSNCI 509
Query: 186 RAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYI 245
IH + R+ V +F W L TD+ +RG+DFK VN VI +DFP S +Y+
Sbjct: 510 --DYIHGSRPKEDRDQIVLEFANKSIWFLCCTDIFSRGIDFKEVNTVICWDFPQSSDSYL 567
Query: 246 HRI 248
HRI
Sbjct: 568 HRI 570
>gi|123420886|ref|XP_001305854.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121887396|gb|EAX92924.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 458
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 142/250 (56%), Gaps = 17/250 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS-CDILISTPLRLRLAIRRKKIDL 59
LA+Q R+ KK + + +++ ++K F C I+I+TP RL + L
Sbjct: 136 LASQVYRQFKKFSGPLESKVQQLRKH-------RGFPKCQIIIATPKRLTEFSSK----L 184
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA 119
S V+YLVLDEAD L + +K D V++ + SLF+AT+ VEE ARS M +
Sbjct: 185 STVKYLVLDEADYLLS-HSFVKQTDDVLQNLPKEGVYYSLFTATMTPKVEETARSFMFNP 243
Query: 120 VRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKERAKELYG 178
VR+ VG K+ + +I Q+L F G+E+GK++ L+Q + ++ P +IFV +++RA +L
Sbjct: 244 VRIQVGDKHAIAANIDQELKFVGTEKGKVVELKQRIQSGTIGLPCIIFVMNRQRAYDLSQ 303
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL G + V+ SD + T+R +A+ R G+ LI TD+ RG+D + V+N+D P
Sbjct: 304 EL---GYPSAVLTSDENDTERASAIRRIRTGEVQFLITTDLGGRGIDLAALKTVVNFDMP 360
Query: 239 DSGAAYIHRI 248
YIHRI
Sbjct: 361 ADTTTYIHRI 370
>gi|294933866|ref|XP_002780884.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239891011|gb|EER12679.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 546
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 131/220 (59%), Gaps = 23/220 (10%)
Query: 1 LATQTTRECKKLAKG--NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT RE +L + KF+IKL+ K +T++ + DI + TPL L A+R K+D
Sbjct: 258 LAVQTVREADRLIQACTKKFRIKLLDK----NTNVKRL--DIGVQTPLGLVQALREGKVD 311
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP------------SIVRSLFSATLPD 106
+ + +V DE DKL ++G ID ++K + +I SLFSAT+PD
Sbjct: 312 FNNTQVIVFDEGDKLLDLG-FQDQIDEIIKYANEEDERRRTAGSALGTIQLSLFSATMPD 370
Query: 107 FVEELARSIMHDAV-RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVL 164
V L S+M RV VG++ +A++ ++Q+L+F G+EEGKL+ALR+ A + PP L
Sbjct: 371 NVVHLMMSVMDPPPNRVWVGQQGSAAKDVQQRLLFCGNEEGKLVALRRMIANGEVKPPCL 430
Query: 165 IFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
FVQSK RA+EL EL FDG+ IHSD+S+ QR+ ++
Sbjct: 431 AFVQSKARAQELTKELMFDGVFVACIHSDMSRKQRDTCIE 470
>gi|403213513|emb|CCK68015.1| hypothetical protein KNAG_0A03280 [Kazachstania naganishii CBS
8797]
Length = 607
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 10/218 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL I R KI LS V+YLVLDEAD++ ++G ++ I +V+ C PS
Sbjct: 282 GCDLLVATPGRLSDMIERGKISLSNVKYLVLDEADRMLDMGFEIQ-IRQIVEGCDMPPSS 340
Query: 96 VRS--LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLA 150
R +FSAT P ++ LAR + D + + VG+ + SE+I Q++++ S + K LL
Sbjct: 341 ERQTLMFSATFPADIQHLARDFLRPDYIFLSVGKVGSTSENITQRVMYVESMDKKSALLD 400
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L S L LIFV++K A +L L +RA IH D +Q++RE A+ F++G+
Sbjct: 401 LLASSEPGL---TLIFVETKRMADQLTDFLIMQNLRATAIHGDRTQSERERALAAFKSGR 457
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 458 ANILVATAVAARGLDIPNVTHVINYDLPGDIDDYVHRI 495
>gi|444316240|ref|XP_004178777.1| hypothetical protein TBLA_0B04200 [Tetrapisispora blattae CBS 6284]
gi|387511817|emb|CCH59258.1| hypothetical protein TBLA_0B04200 [Tetrapisispora blattae CBS 6284]
Length = 631
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C +L++TP RL + R +I L+ V+YLVLDEAD++ ++G I +V C P
Sbjct: 289 CALLVATPGRLNDLLERGRISLANVKYLVLDEADRMLDMG-FEPQIRHIVDGCDMPPAGE 347
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT PD ++ LAR + D + + VGR + SE+I Q +++ + K AL
Sbjct: 348 RQTLMFSATFPDDIQHLARDFLSDYIFLSVGRVGSTSENITQHILYV-EDMDKKSALLDL 406
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ S + LIFV++K A EL L RA IH D +Q++RE A+ FR G+ +L
Sbjct: 407 LSASNSGLTLIFVETKRMADELTDFLIMQNFRATAIHGDRTQSERERALHAFRNGRADLL 466
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 467 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 500
>gi|70663482|emb|CAJ15140.1| PL10a protein [Platynereis dumerilii]
Length = 771
Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 4/220 (1%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP RL + R KI L + ++VLDEAD++ ++G I +V+ +
Sbjct: 418 DLPERGCHLLVATPGRLVDMLERGKIGLDHIRFVVLDEADRMLDMG-FEPQIRRIVEKDT 476
Query: 92 NPSI--VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P R+L FSAT P ++ LAR +H+ + + VGR + SE+I QK+V+ + +
Sbjct: 477 MPPTGDRRTLMFSATFPKEIQILARDFLHNYIFLAVGRVGSTSENITQKVVWVEEPDKRS 536
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G + IH D SQ +RE A+ +FR+
Sbjct: 537 FLLDLLNASGPDSLTLVFVETKKGADALDNFLYNEGYPSACIHGDRSQKEREEALRNFRS 596
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT VL+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 597 GKTPVLVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRI 636
>gi|70663484|emb|CAJ15141.1| PL10b protein [Platynereis dumerilii]
Length = 816
Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 4/220 (1%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL + C +L++TP RL + R KI L + ++VLDEAD++ ++G I +V+ +
Sbjct: 463 DLPERGCHLLVATPGRLVDMLERGKIGLDHIRFVVLDEADRMLDMG-FEPQIRRIVEKDT 521
Query: 92 NPSI--VRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P R+L FSAT P ++ LAR +H+ + + VGR + SE+I QK+V+ + +
Sbjct: 522 MPPTGDRRTLMFSATFPKEIQILARDFLHNYIFLAVGRVGSTSENITQKVVWVEEPDKRS 581
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L A + L+FV++K+ A L L +G + IH D SQ +RE A+ +FR+
Sbjct: 582 FLLDLLNASGPDSLTLVFVETKKGADALDNFLYNEGYPSACIHGDRSQKEREEALRNFRS 641
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT VL+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 642 GKTPVLVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRI 681
>gi|50310213|ref|XP_455126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660335|sp|Q6CLR3.1|DED1_KLULA RecName: Full=ATP-dependent RNA helicase DED1
gi|49644262|emb|CAG97833.1| KLLA0F01034p [Kluyveromyces lactis]
Length = 627
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 139/261 (53%), Gaps = 23/261 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--------KFSCDILISTPLRLRLAI 52
LATQ E KK F + K +V S ++ C++L++TP RL +
Sbjct: 254 LATQIYDEAKK------FTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL 307
Query: 53 RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVE 109
R+ I L+ V+YLVLDEAD++ ++G I +V+ PS+ +FSAT P ++
Sbjct: 308 ERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQ 366
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS--EEGKLLALRQSFAESLNPPVLIFV 167
LA + D V + VGR + SE+I QK+++ + LL L + E L LIFV
Sbjct: 367 HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGL---TLIFV 423
Query: 168 QSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFK 227
++K A L L +G +A IH D +Q +RE A+ F+ G+ +L+AT V ARG+D
Sbjct: 424 ETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIP 483
Query: 228 GVNCVINYDFPDSGAAYIHRI 248
V VIN+D P+ Y+HRI
Sbjct: 484 NVTHVINFDLPNDIDDYVHRI 504
>gi|366999310|ref|XP_003684391.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
gi|357522687|emb|CCE61957.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
Length = 628
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R ++ L+ V+YLVLDEAD++ ++G I +V C P
Sbjct: 288 GCDLLVATPGRLNDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRHIVDGCDMPDAN 346
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT PD ++ LAR ++D + + VGR + SE+I Q++++ + K AL
Sbjct: 347 NRQTLMFSATFPDDIQHLARDFLNDYIFLSVGRVGSTSENITQRILYV-EDMDKKSALLD 405
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A + LIFV++K A EL L A IH D +Q +RE A+ F+ G+ V
Sbjct: 406 LLAAENDGLTLIFVETKRMADELTDFLIMQDFMATAIHGDRTQIERERALAAFKGGRANV 465
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 466 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 500
>gi|156086412|ref|XP_001610615.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797868|gb|EDO07047.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 457
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 129/216 (59%), Gaps = 2/216 (0%)
Query: 34 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP 93
+ F+ +I ISTP L +++ K L +E LV+DEAD L E G K +D ++ +
Sbjct: 164 TNFNAEICISTPGTLHSLMKKYKSILDSLECLVVDEADVLLE-GGYAKQLDKILAKLIDK 222
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
I + +FS+T+ V ELA + M DAV+V VG+ ++++Q+LV +E GK+ LRQ
Sbjct: 223 DITKLVFSSTMQPQVLELAATFMPDAVKVAVGQSTRVCKNVRQELVCVTNESGKIPTLRQ 282
Query: 154 SFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ + P L+F+QS +R ++Y ++ D + + +S ++R+ ++ FR K W
Sbjct: 283 LIRDGKIKLPCLVFLQSIDRVTQVYNQMKDDNLLVERLTGQMSPSERDELINRFRLSKIW 342
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ T+++ARG+D +G+ V+N+D P + YI+RI
Sbjct: 343 VLLCTNILARGLDIRGIGSVVNFDMPLTEQEYINRI 378
>gi|417857754|ref|ZP_12502811.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens F2]
gi|338823758|gb|EGP57725.1| ATP-dependent RNA helicase [Agrobacterium tumefaciens F2]
Length = 491
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 163
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + +L+ S + D V+V V A++
Sbjct: 164 LGFIHDLRKISRMVPAKRQ----TLLFSATMPKAIADLSHSYLTDPVKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 220 VEQYVHFVAGKNDKTDLLKKSLNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKGFKDGDIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 334
>gi|366991525|ref|XP_003675528.1| hypothetical protein NCAS_0C01720 [Naumovozyma castellii CBS 4309]
gi|342301393|emb|CCC69162.1| hypothetical protein NCAS_0C01720 [Naumovozyma castellii CBS 4309]
Length = 640
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R KI L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 302 GCDLLVATPGRLTDLIDRGKISLANIRYLVLDEADRMLDMG-FEPQIRQIVEGSDMPQVG 360
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P +++LAR ++D + + VGR + SE+I Q +++ ++ K AL
Sbjct: 361 DRQTLMFSATFPVDIQQLARDFLNDYIFLSVGRVGSTSENITQVILYV-EDQDKYSALLD 419
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A + + LIFV++K A +L L +A IH D +Q +RE A+ FRAG +
Sbjct: 420 LLAATTDGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQQERERALSAFRAGTATI 479
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 480 LVATAVAARGLDIPNVTHVINFDLPGDIDDYVHRI 514
>gi|358387706|gb|EHK25300.1| hypothetical protein TRIVIDRAFT_54793 [Trichoderma virens Gv29-8]
Length = 700
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 118/223 (52%), Gaps = 43/223 (19%)
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEE 110
L V L+LDEAD L +DP+ + ACSNP + S +SAT+ +E
Sbjct: 355 LPTVRNLILDEADVL---------LDPLFREQTLGIWTACSNPDLGLSFWSATMGSNIET 405
Query: 111 L--------ARSI---MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF---- 155
L A S+ +R++VG K+TA +I +L++ SE+GKLLALRQ
Sbjct: 406 LVTERLTSRAESLGISQRPLIRLVVGLKDTAVPNIVHRLIYTASEQGKLLALRQLLRPTS 465
Query: 156 ----AESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVD 204
L PP L+F Q+ +RA L EL +D R +HS L R +
Sbjct: 466 SIDSGPPLRPPFLVFTQTIDRATALQEELKYDIPLEAGGSSRIAALHSGLPDAARAAIMR 525
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
FRAG+ WVLI TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 526 KFRAGEIWVLITTDVLARGVDFAGVNGVLNYDVPGSSAAYVHR 568
>gi|418300341|ref|ZP_12912167.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355533754|gb|EHH03074.1| dead-box ATP-dependent RNA helicase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 490
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R I LS+V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLD 163
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + +L+ + + D V+V V A++
Sbjct: 164 LGFIHDLRKISKMVPAKRQ----TLLFSATMPKAIADLSHNYLTDPVKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++LY L G + IH +
Sbjct: 220 VEQYVHFVAGKNDKTDLLKKSLNENPDGRAIVFLRTKHGAEKLYKHLEHIGFKVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ F+ G+ VL+ATDV ARG+D V V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRI 334
>gi|346971791|gb|EGY15243.1| ATP-dependent RNA helicase ROK1 [Verticillium dahliae VdLs.17]
Length = 639
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 104/183 (56%), Gaps = 21/183 (11%)
Query: 86 VVKACSNPSIVRSLFSATLPDFVEEL------ARSIMHDAVRVIVGRKNTASESIKQKLV 139
V AC+NP + S +SAT+ +E L A++ +R++VG K+TA +I KL+
Sbjct: 330 VWSACTNPDLRISFWSATMGSNIETLVTDMLAAKASTSPLIRLVVGLKDTAVPNITHKLI 389
Query: 140 FAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD-------G 184
+ SE+GKLL LRQ L PP ++F Q+ ERA L EL +D
Sbjct: 390 YTASEQGKLLGLRQLLHPTSGDEAGPPLRPPFIVFTQTIERASALAEELKYDIPLAAGGP 449
Query: 185 IRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAY 244
R +HS L+ R + FRAG+ WVLI TDV+ARG+DF GVN +INYD P S AAY
Sbjct: 450 ARIAALHSGLTDAARAGIMRRFRAGEVWVLITTDVLARGVDFAGVNGIINYDIPGSTAAY 509
Query: 245 IHR 247
+HR
Sbjct: 510 VHR 512
>gi|357627267|gb|EHJ77004.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 421
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 130/210 (61%), Gaps = 13/210 (6%)
Query: 1 LATQTTRECKKLAKGNKFQ---IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKK- 56
LA Q RE +L+ + + I+ +K+ ++ + + D++ISTP RL ++++
Sbjct: 214 LANQIYREAIRLSASTQLRCSVIRSLKESKIKEREATIRKSDLVISTPNRLCYLLKQETV 273
Query: 57 -IDLSRVEYLVLDEADKLFE-----VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEE 110
I++ +V++LV+DEADKLFE V + +D ++ +C + ++FSAT + +
Sbjct: 274 GINMDKVQWLVIDEADKLFEGSQEEVDTFRQQLDIILSSCKS---RLAMFSATHTPSIAK 330
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
AR M + + VG +N AS S++Q+L+F G+E GKL+A RQ + L PPVL+FVQSK
Sbjct: 331 WARHNMRGLINITVGHRNAASSSVEQELLFCGNESGKLVAFRQLIQKGLKPPVLVFVQSK 390
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRE 200
+RAKEL+ EL +DGI+ VIH D +Q Q E
Sbjct: 391 DRAKELFKELLYDGIQVDVIHGDRTQAQVE 420
>gi|262340963|ref|YP_003283818.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272300|gb|ACY40208.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 551
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 8/211 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I+I TP R+ I+RKK+ L +++YL+LDEAD++ +G + +D +VK P +SL
Sbjct: 127 IIIGTPGRIIDLIKRKKLHLEKIKYLILDEADEMLNMG-FKEELDYIVKML--PKNRQSL 183
Query: 100 -FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
FSAT+ ++ +AR+ + D V +I G+KN S+ +K G K AL++
Sbjct: 184 LFSATMSKYMNAIARTYLTDPVEIIAGQKNIVSDGVKHIYYMVGHLNKKYSALKR--IVD 241
Query: 159 LNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+NP + +IF ++K+ KE+ L DG A ++ DLSQTQRE+ ++ FR L+A
Sbjct: 242 INPGIYGIIFCETKKETKEIAEYLIKDGYNADALYGDLSQTQRESVMNRFRNKNLQFLVA 301
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
TDV ARG+D + VINY+ P YIHR
Sbjct: 302 TDVAARGLDVHNITHVINYNLPKESDIYIHR 332
>gi|308159786|gb|EFO62305.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 554
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 134/260 (51%), Gaps = 14/260 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q TR C +LA + + L +KE V + + DI+++TPL L + +
Sbjct: 177 LADQVTRVCNQLAPSFR-TVLLQRKETVTQSLANSKKHDIMVTTPLVLLNFLTEGIVRFP 235
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKA-----------CSNPSIVRSLFSATLPDFVE 109
++ +VLDE D L ++ ID V++ C V +LFSA++ D V
Sbjct: 236 NLQTIVLDEVDCLMN-PQFIEQIDAVLEWILKTNANTGGYCPADRPVFTLFSASVTDQVF 294
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
L + + D V++ V + ++KQ +FAG + K+ L+Q+ E PPVL+F +
Sbjct: 295 GLVNTFLVDPVQISVAGAGMPTNTVKQHFMFAGRDRYKMFTLQQAIMEYGKPPVLVFAST 354
Query: 170 KERAKELYGEL-AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+R +Y EL + G +H+ L+++QR V FR W+L+ TDV+ARG+DF
Sbjct: 355 SDRVFTIYKELICYVDWPTGYLHAGLTKSQRHEIVTKFRTADLWILVCTDVLARGLDFPR 414
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+ VIN+D P YIHRI
Sbjct: 415 IGLVINFDIPSDLTHYIHRI 434
>gi|49475813|ref|YP_033854.1| ATP-dependent RNA helicase [Bartonella henselae str. Houston-1]
gi|49238621|emb|CAF27864.1| ATP-dependent RNA helicase [Bartonella henselae str. Houston-1]
Length = 460
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 140/260 (53%), Gaps = 25/260 (9%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + +AKG L+ + R + + DILI+TP RLR IR K +D
Sbjct: 92 LAVQIDETIRAVAKGTHLSTCLIFGGVSRLKQIKRMEAGVDILIATPGRLRDLIREKYVD 151
Query: 59 LSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+ +L+LDEAD++ ++G + ++HI ++ + LFSAT+P + LA+ ++
Sbjct: 152 LSQSRFLILDEADRMLDMGFIHDIRHIVKLLHQVRQTA----LFSATMPKEITTLAKCLL 207
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEE-----GKLLALRQSFAESLNP---PVLIFVQ 168
+D V++ V + T + I QKL + E GKLL NP V++F +
Sbjct: 208 NDPVKIEVSPQGTTAAEIAQKLYCVPTCEKKNVLGKLLT---------NPDFVSVIVFTR 258
Query: 169 SKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+K A + LA G IH + SQ+ R++A+ FR +L+ATD+ ARG+D G
Sbjct: 259 TKYCADAVTRNLASRGYSVATIHGNKSQSARQSALKAFRERSVRILVATDIAARGIDIPG 318
Query: 229 VNCVINYDFPDSGAAYIHRI 248
++ VINYD PD +Y+HRI
Sbjct: 319 ISHVINYDLPDEAESYVHRI 338
>gi|114771133|ref|ZP_01448573.1| dead-box ATP-dependent RNA helicase [Rhodobacterales bacterium
HTCC2255]
gi|114548415|gb|EAU51301.1| dead-box ATP-dependent RNA helicase [alpha proteobacterium
HTCC2255]
Length = 531
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 133/220 (60%), Gaps = 10/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK--- 88
DLSK DIL++TP RL + +K + L ++LVLDEAD++ ++G L P VK
Sbjct: 222 DLSK-GVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFL-----PAVKRII 275
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
+ N LFSAT+ +++L + + D V+V V +N+ + I+Q L+ S++ K
Sbjct: 276 SKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQSLMHL-SKQNKG 334
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
LAL++ + + V++F ++K + +L L I A IH + SQ QR+ A+DDF+
Sbjct: 335 LALQRIISANPKKRVIVFSRTKHGSDKLVKWLGTQNIGADAIHGNKSQGQRQRALDDFKK 394
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT++LIATD+ ARG+D G+ VIN+D P+ +Y+HRI
Sbjct: 395 GKTYILIATDIAARGIDIPGIEIVINFDLPNVPESYVHRI 434
>gi|255726050|ref|XP_002547951.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
gi|240133875|gb|EER33430.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
Length = 665
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R K+ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 319 GCDLLVATPGRLKDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPEVT 377
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ E+ K + L
Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDEDKKSVIL-D 436
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A + N ++F ++K A +L L G A IH D SQ +RE A+ F+ G +
Sbjct: 437 LLAANENGLTIVFTETKRMADQLADFLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPI 496
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 497 LVATAVAARGLDIPNVGHVINFDLPSDIDDYVHRI 531
>gi|386015150|ref|YP_005933429.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|386080118|ref|YP_005993643.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
gi|327393211|dbj|BAK10633.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|354989299|gb|AER33423.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
Length = 449
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|448522534|ref|XP_003868713.1| Ded1 protein [Candida orthopsilosis Co 90-125]
gi|380353053|emb|CCG25809.1| Ded1 protein [Candida orthopsilosis]
Length = 636
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 291 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRQIVQECDMPSVE 349
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ +E K + L
Sbjct: 350 NRQTLMFSATFPRDIQMLARDFLKNYIFLSVGRVGSTSENITQKVLYVEDDEKKSVILDM 409
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A S ++F ++K A L L G A IH D SQ +RE A+ F+ GK +
Sbjct: 410 LNANSAGL-TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKNGKAPI 468
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 469 LVATAVAARGLDIPNVSHVINYDLPGDIDDYVHRI 503
>gi|378768016|ref|YP_005196486.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
gi|365187499|emb|CCF10449.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
Length = 449
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|366989727|ref|XP_003674631.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
gi|342300495|emb|CCC68257.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 1 LATQTTRECKKLAKGNKFQ---------IKLMKKELVRSTDLSKFSCDILISTPLRLRLA 51
LATQ E KK + Q I +E+ R CD+L++TP RL
Sbjct: 241 LATQIFDEAKKFCYRSWVQPCVVYGGSPIGNQMREMDRG-------CDLLVATPGRLSDL 293
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIVRS--LFSATLPDFV 108
I R KI LS V+YLVLDEAD++ ++G I +V+ P R +FSAT P +
Sbjct: 294 IDRGKISLSNVKYLVLDEADRMLDMG-FEPQIRAIVEGADMTPVGERQTLMFSATFPADI 352
Query: 109 EELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPPVLIF 166
+ LAR + D + + VGR + SE+I Q++++ +++ K LL L + + L LIF
Sbjct: 353 QHLARDFLADYIFLSVGRVGSTSENITQRVLYVENQDKKSALLDLLSASNDGL---TLIF 409
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V++K A +L L RA IH D +Q +RE A+ FR+G+ +L+AT V ARG+D
Sbjct: 410 VETKRMADQLTDFLIMQDFRATAIHGDRTQQERERALAAFRSGRANLLVATAVAARGLDI 469
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
V VINYD P Y+HRI
Sbjct: 470 PNVTHVINYDLPGDIDDYVHRI 491
>gi|89052606|ref|YP_508057.1| DEAD/DEAH box helicase [Jannaschia sp. CCS1]
gi|88862155|gb|ABD53032.1| DEAD/DEAH box helicase-like protein [Jannaschia sp. CCS1]
Length = 451
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R+ IDLS V++LVLDEAD++ ++G + L+ I P A P
Sbjct: 142 GTDILVATPGRLMDLMDRRAIDLSTVKHLVLDEADQMLDLGFIHALRKIAP---ALGTPR 198
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EELA + + + +V V A++ + Q + F + K LR+
Sbjct: 199 QTM-LFSATMPKQMEELASAYLSNPKKVQVSPPGKAADKVTQVVHFM-PKPAKPAKLREV 256
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E + VL+F ++K ++L L DG A IH + SQ QR+ A+ FR G +L
Sbjct: 257 LNEDPDALVLVFGRTKHGCEKLMKGLVADGYNAASIHGNKSQGQRDRAIKAFRDGTIKIL 316
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV VINY+ PD+ Y+HRI
Sbjct: 317 VATDVAARGIDIPGVAYVINYELPDTPDNYVHRI 350
>gi|354547955|emb|CCE44690.1| hypothetical protein CPAR2_404940 [Candida parapsilosis]
Length = 647
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 297 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRQIVQECDMPSVE 355
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K +L +
Sbjct: 356 NRQTLMFSATFPRDIQMLARDFLKNYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDM 415
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L ++F ++K A L L G A IH D SQ +RE A+ F+ GK
Sbjct: 416 LNANNSGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKNGKA 472
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 473 PILVATAVAARGLDIPNVSHVINYDLPGDIDDYVHRI 509
>gi|291616785|ref|YP_003519527.1| RhlE [Pantoea ananatis LMG 20103]
gi|291151815|gb|ADD76399.1| RhlE [Pantoea ananatis LMG 20103]
Length = 449
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLVHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|150376621|ref|YP_001313217.1| DEAD/DEAH box helicase [Sinorhizobium medicae WSM419]
gi|150031168|gb|ABR63284.1| DEAD/DEAH box helicase domain protein [Sinorhizobium medicae
WSM419]
Length = 498
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLISRKAVTLTQGRYLVLDEADQMLDLGFIHDLRKIAKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V R A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVTRPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + L+F ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLVFSRTKHGAEKLMKHLDQVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVADAYVHRI 334
>gi|114765123|ref|ZP_01444268.1| putative ATP-dependent RNA helicase protein [Pelagibaca bermudensis
HTCC2601]
gi|114542527|gb|EAU45553.1| putative ATP-dependent RNA helicase protein [Roseovarius sp.
HTCC2601]
Length = 430
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L Q ++L G K ++ + + + R + DIL++TP RL + RK +D
Sbjct: 87 LVNQIADSLRQLTDGTKLRVGTVVGGQSINRQINFLSRGTDILVATPGRLIDLMDRKAVD 146
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS V LVLDEAD++ ++G + L+ I P + LFSAT+P +EEL+ + +
Sbjct: 147 LSTVRQLVLDEADQMLDMGFIHALRRIAPQLGTPRQ----TMLFSATMPKQMEELSSAYL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ RV V A++ I Q + F + GK LR+ L+F ++K A+ L
Sbjct: 203 TNPRRVQVSPPGKAADKITQSVHFV-DKAGKPSKLRELLGRDDESLTLVFARTKHGAERL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L DG A IH + SQ QR+ A+ FR G VL+ATDV ARG+D GV V+NYD
Sbjct: 262 MKGLVADGYNAASIHGNKSQGQRDRAIKAFRDGDINVLVATDVAARGIDIPGVAYVVNYD 321
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 322 LPEVPDNYVHRI 333
>gi|329847732|ref|ZP_08262760.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
gi|328842795|gb|EGF92364.1| putative ATP-dependent RNA helicase rhlE [Asticcacaulis
biprosthecum C19]
Length = 606
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 140/252 (55%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA+Q K +KG QI + + D+L+ TP RL I +K +D
Sbjct: 87 LASQIAESFKTYSKGMGLQIATIYGGVKYGPQYKALLGGLDVLVCTPGRLIDHIEQKTVD 146
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSIVRSLF-SATLPDFVEELARSIM 116
LS+VE VLDEAD++ ++G + P+ + S P ++LF SAT+P + LA ++
Sbjct: 147 LSQVECFVLDEADQMLDLG----FVKPIRQVASRLPKKRQNLFFSATMPKEIGVLASELL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
D RV + + T +E + Q+++F ++ + L L + +A+++ L+F ++K A +
Sbjct: 203 TDPKRVEITPEATTAERVSQQVLFIEAQRKRAL-LSEMYADAVLERTLVFTRTKRSADRV 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G+ A IH D +Q+QRE A+ FRAGK L+ATD+ ARG+D V+ VINY+
Sbjct: 262 AAYLQAGGVEAAAIHGDKNQSQRERALQAFRAGKVRALVATDIAARGIDVDNVSHVINYE 321
Query: 237 FPDSGAAYIHRI 248
P+ AY+HRI
Sbjct: 322 LPNVAEAYVHRI 333
>gi|365986943|ref|XP_003670303.1| hypothetical protein NDAI_0E02430 [Naumovozyma dairenensis CBS 421]
gi|343769073|emb|CCD25060.1| hypothetical protein NDAI_0E02430 [Naumovozyma dairenensis CBS 421]
Length = 661
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 318 GCDLLVATPGRLSDLLERGKISLQNIKYLVLDEADRMLDMG-FEPQIRHIVEGVDMPQVG 376
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P +++LAR ++D V + VGR + S++I QK+++ ++ K AL
Sbjct: 377 ERQTLMFSATFPIDIQQLARDFLNDYVFLSVGRVGSTSDNITQKILYV-EDQDKYSALLD 435
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + + LIFV++K A +L L RA IH D +Q +RE A+ F+AG +
Sbjct: 436 LLSATSDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQAERERALSAFKAGTANL 495
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 496 LVATAVAARGLDIPNVTHVINFDLPSDIDDYVHRI 530
>gi|158514835|sp|A3LQ01.3|DED1_PICST RecName: Full=ATP-dependent RNA helicase DED1
Length = 647
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 301 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQ 359
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 360 DRQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDL 419
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 420 LSAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGAA 476
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 477 PILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRI 513
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + +DLS VE LVLDEAD++ ++G L + +V+ S PS
Sbjct: 181 GADILVATPGRLLDFMGQDLVDLSSVEILVLDEADRMLDMG-FLPDVSRIVE--STPSKR 237
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT+ V +LA ++ D V+V V +N A+++++QKL+F+ S E K +
Sbjct: 238 QTLMFSATMEKEVRQLADRMLKDPVQVQVTPENEAADTVEQKLIFS-SREDKREIIASLL 296
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ ++F ++K A +L EL GI + IH D +Q QR++A++ F++GK V++
Sbjct: 297 TDEAVESAIVFTRTKHGADKLSRELKRRGIESVAIHGDKTQGQRQDALNRFKSGKVRVMV 356
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D ++ V NYD P+ AYIHRI
Sbjct: 357 ATDVAARGLDIPKLSHVFNYDVPEEAGAYIHRI 389
>gi|398830350|ref|ZP_10588543.1| DNA/RNA helicase, superfamily II [Phyllobacterium sp. YR531]
gi|398215092|gb|EJN01658.1| DNA/RNA helicase, superfamily II [Phyllobacterium sp. YR531]
Length = 542
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 136/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +KLAKG L+ + R ++K D+LI+TP RL +R +ID
Sbjct: 176 LAVQIEETFRKLAKGAHISTALVLGGVSRVAQINKMQGGVDVLIATPGRLTDLVRDNRID 235
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS +LVLDEAD++ ++G + + + K +LFSAT+P V LA S++ +
Sbjct: 236 LSETRWLVLDEADRMLDMG-FINDVKKIAKGTHRDRQT-ALFSATMPQEVATLAASLLRN 293
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V + T + IKQ + + + K + E+L+ V++F ++K A +
Sbjct: 294 PVRVEVAPQGTTAAEIKQVVHMIPTRQKKQVLSAMLKDETLSS-VIVFTRTKHGADAVTR 352
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L DG IH + SQ R+ A++ F+ G +L+ATD+ ARG+D G++ VIN+D P
Sbjct: 353 ILEKDGYNVAAIHGNKSQNARQRALNGFKDGSVRILVATDIAARGIDVVGISHVINFDLP 412
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 413 DEPESYVHRI 422
>gi|302923957|ref|XP_003053784.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734725|gb|EEU48071.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 695
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 116/223 (52%), Gaps = 43/223 (19%)
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEE 110
L V LVLDEAD L +DP+ + AC++P + S +SAT+ +E
Sbjct: 353 LPTVRDLVLDEADVL---------LDPLFREAMLAVWTACTSPDLRLSFWSATMGSNIES 403
Query: 111 LARSIM-----------HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF---- 155
L + VR++VG K+TA +I KL++ +E+GKLLALRQ
Sbjct: 404 LVTEKLTSRAQALGITPKPLVRLVVGLKDTAVPNITHKLIYTATEQGKLLALRQLLHPTS 463
Query: 156 ----AESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVD 204
L PP L+F Q+ +RA L+ EL +D R +HS L+ R +
Sbjct: 464 SIDSGPPLRPPFLVFTQTIDRATALHEELKYDIPLEAGGAARIAALHSGLTDKARSAIMR 523
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
FR G+ WVLI TDV+ARG+DF GVN V+NYD P S A Y+HR
Sbjct: 524 KFRGGEIWVLITTDVLARGVDFAGVNGVVNYDVPGSSAGYVHR 566
>gi|150864373|ref|XP_001383156.2| ATP-dependent RNA helicase of DEAD box family [Scheffersomyces
stipitis CBS 6054]
gi|149385629|gb|ABN65127.2| ATP-dependent RNA helicase of DEAD box family, partial
[Scheffersomyces stipitis CBS 6054]
Length = 616
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 270 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQ 328
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 329 DRQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDL 388
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 389 LSAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGAA 445
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 446 PILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRI 482
>gi|251780900|ref|ZP_04823820.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243085215|gb|EES51105.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 432
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 130/213 (61%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+TP RL I +K IDLS V++ VLDEAD++F++G +++ + +V P +
Sbjct: 125 GVDILIATPGRLLDLIDQKYIDLSNVKHFVLDEADRMFDMG-MVRDVKKIVAKL--PKVR 181
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT+P V+ L SI+ D V+V V ++ ++I Q + F ++ K L +
Sbjct: 182 QNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSLLVHLLK 241
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
ES+ +L+F ++K A + +LA G + IH + SQ R+ A+ +F+ GK VL+
Sbjct: 242 DESIKS-LLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLV 300
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ VINYD PD Y+HRI
Sbjct: 301 ATDIAARGIDVDGLSHVINYDLPDVPETYVHRI 333
>gi|50291147|ref|XP_448006.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661189|sp|Q6FP38.1|DBP1_CANGA RecName: Full=ATP-dependent RNA helicase DBP1
gi|49527317|emb|CAG60957.1| unnamed protein product [Candida glabrata]
Length = 604
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C++L++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 271 GCNLLVATPGRLNDLLERGKISLVNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPSVN 329
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I+QK++F + K AL
Sbjct: 330 DRQTLMFSATFPREIQHLARDFLKDYIFLSVGRVGSTSENIQQKVLFV-EDYDKNSALLD 388
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ L+FV++K A +L L +A IH D +Q +RE A+ FR G +
Sbjct: 389 ILINEIDGLTLVFVETKRMADQLTDFLIVQNFKATAIHGDRTQAERERALHAFRNGIANI 448
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 449 LVATAVAARGLDIPNVTNVINYDLPTDIDDYVHRI 483
>gi|320353120|ref|YP_004194459.1| DEAD/DEAH box helicase [Desulfobulbus propionicus DSM 2032]
gi|320121622|gb|ADW17168.1| DEAD/DEAH box helicase domain protein [Desulfobulbus propionicus
DSM 2032]
Length = 428
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 6/211 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DI+++ P RL + K +DLSRV+ L+LDEAD +F+ G L I +++ P+ +
Sbjct: 121 VDIVVACPGRLLDLLNDKAVDLSRVDTLILDEADHMFDKG-FLPDIRRILRRL--PAERQ 177
Query: 98 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
SL FSAT+PD + LA I+ D V V + + +SI +L +A +E K L Q
Sbjct: 178 SLVFSATMPDEIRHLAEDILTDPVTVQINPTRSV-QSISHRL-YAVEQEQKTDLLLQLLK 235
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ LIF ++K +AK L +LA G +A + +LSQ +R+ A+D F+ G +L+A
Sbjct: 236 DEAMATTLIFTRTKHKAKNLAQKLAQSGFKATSLQGNLSQNRRQQALDGFKTGAFTILVA 295
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
TD+ ARG+D G++ VINYD PD+ AYIHR
Sbjct: 296 TDIAARGIDVNGISHVINYDMPDTAEAYIHR 326
>gi|188587881|ref|YP_001922673.1| putative ATP-dependent RNA helicase RhlE [Clostridium botulinum E3
str. Alaska E43]
gi|188498162|gb|ACD51298.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum E3 str.
Alaska E43]
Length = 432
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 130/213 (61%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+TP RL I +K IDLS V++ VLDEAD++F++G +++ + +V P +
Sbjct: 125 GVDILIATPGRLLDLIDQKYIDLSNVKHFVLDEADRMFDMG-MVRDVKKIVAKL--PKVR 181
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT+P V+ L SI+ D V+V V ++ ++I Q + F ++ K L +
Sbjct: 182 QNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSLLVHLLK 241
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
ES+ +L+F ++K A + +LA G + IH + SQ R+ A+ +F+ GK VL+
Sbjct: 242 DESIKS-LLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLV 300
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ VINYD PD Y+HRI
Sbjct: 301 ATDIAARGIDVDGLSHVINYDLPDVPETYVHRI 333
>gi|195952677|ref|YP_002120967.1| DEAD/DEAH box helicase domain-containing protein [Hydrogenobaculum
sp. Y04AAS1]
gi|195932289|gb|ACG56989.1| DEAD/DEAH box helicase domain protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 364
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ DILI TP R++ I RK ++LS+VEYLVLDE D++ ++G ++ I+ ++
Sbjct: 119 NVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMG-FIEDIEYIISFLPKERTT 177
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT+P +E LA+ + + + + +I++K++ S K+ L
Sbjct: 178 -YMFSATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIID 236
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+LIFV++K+ AK+L+ L GIRA +H DL+Q QRE A+ F++G +LIA
Sbjct: 237 THPMEKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIA 296
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D K V VINY+ P+ YIHRI
Sbjct: 297 TDVAARGLDIKDVGVVINYNIPEDPELYIHRI 328
>gi|187934290|ref|YP_001887690.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
gi|187722443|gb|ACD23664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 130/213 (61%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+TP RL I +K IDLS V++ VLDEAD++F++G +++ + +V P +
Sbjct: 125 GVDILIATPGRLLDLIDQKYIDLSNVKHFVLDEADRMFDMG-MVRDVKKIVAKL--PKVR 181
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT+P V+ L SI+ D V+V V ++ ++I Q + F ++ K L +
Sbjct: 182 QNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSLLVHLLK 241
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
ES+ +L+F ++K A + +LA G + IH + SQ R+ A+ +F+ GK VL+
Sbjct: 242 DESIKS-LLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLV 300
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ VINYD PD Y+HRI
Sbjct: 301 ATDIAARGIDVDGLSHVINYDLPDVPETYVHRI 333
>gi|212275354|ref|NP_001130628.1| uncharacterized protein LOC100191727 [Zea mays]
gi|194689682|gb|ACF78925.1| unknown [Zea mays]
gi|413943771|gb|AFW76420.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 614
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 143/264 (54%), Gaps = 22/264 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST-------DLSKFSCDILISTPLRLRLAIR 53
LA Q E KK + FQ L T DL K D+L++TP RL +
Sbjct: 178 LAAQINEEAKKFS----FQTGLRVVVAYGGTPMFSQLRDLEK-GVDLLVATPGRLVDLVE 232
Query: 54 RKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDFVEE 110
R +I L ++YLV+DEAD++ +G I +V + P S+ ++ LFSAT P ++
Sbjct: 233 RSRISLEAIKYLVMDEADRMLNMG-FEPQIRKIVDMMNMPKKSVRQTMLFSATFPPEIQR 291
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVF--AGSEEGKLLAL--RQSFAESLN--PPVL 164
LA +H+ + V VGR ++++ I QK+ F G + G LL + +QS S N P L
Sbjct: 292 LATDFLHNYIFVTVGRVGSSTDLIDQKIEFVNGGEKRGFLLDILQKQSVGLSKNKQPLTL 351
Query: 165 IFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGM 224
+FV++K A L L +G A IH D +Q +RE A+ F++G T +L+ATDV +RG+
Sbjct: 352 VFVETKREADSLQYCLQSNGFSATSIHGDRTQQERERALKSFKSGATPILVATDVASRGL 411
Query: 225 DFKGVNCVINYDFPDSGAAYIHRI 248
D V VINYD P S Y+HRI
Sbjct: 412 DVPNVAHVINYDLPKSIDDYVHRI 435
>gi|146413260|ref|XP_001482601.1| hypothetical protein PGUG_05621 [Meyerozyma guilliermondii ATCC
6260]
Length = 666
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 331 GCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 389
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K LL L
Sbjct: 390 SRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDL 449
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 450 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTA 506
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ V+NYD P Y+HRI
Sbjct: 507 PILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRI 543
>gi|402483737|gb|AFQ59989.1| RhlE [Photorhabdus luminescens]
Length = 428
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PK 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 153
LFSAT D ++ LA ++HD V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 181 RQNLLFSATFSDDIKNLANKLLHDPVSVEVARRNSASEQIEQFVHFVDKKRKGELLSF-- 238
Query: 154 SFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
S N VL+F ++K A L +L DG+ A IH + SQ R A+ DF+AG+
Sbjct: 239 -LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTAAAIHGNKSQGARTRALADFKAGRIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPYVVNFELPNVAEDYVHRI 333
>gi|251773001|gb|EES53557.1| putative ATP-dependent helicase [Leptospirillum ferrodiazotrophum]
Length = 472
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 142/252 (56%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q R ++ K + + L+ ++ R D + D++I+TP RL ++R I+
Sbjct: 84 LAGQIERSAREYGKYLRSRTVLLVGGTDMRRQIDFLRRPWDLVIATPGRLIDHMQRGTIN 143
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS V +VLDEAD++ ++G L ++ ++KA +P LF+ATLP ++ L ++ D
Sbjct: 144 LSHVHTVVLDEADRMLDMG-FLPDVETILKAL-HPERQTLLFTATLPARIQMLTKTYQKD 201
Query: 119 AVRVIVGRKNTASESIKQKLVF--AGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
V + + + SI Q++V G+++ LL + ++ LIF ++K A++L
Sbjct: 202 PVLIRLETASAPPVSIDQEVVAISHGAQKWGLLKTILTEPQTTEGQTLIFTRTKRGAEDL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L +G + +H D SQ+QR + FRAG+T +L+ATDV ARG+D V CVINYD
Sbjct: 262 ANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQTRILVATDVAARGLDIDTVTCVINYD 321
Query: 237 FPDSGAAYIHRI 248
P S Y+HRI
Sbjct: 322 LPQSPEDYVHRI 333
>gi|223590230|sp|A5DQS0.3|DED1_PICGU RecName: Full=ATP-dependent RNA helicase DED1
Length = 637
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 302 GCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 360
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K LL L
Sbjct: 361 SRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDL 420
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 421 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTA 477
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ V+NYD P Y+HRI
Sbjct: 478 PILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRI 514
>gi|190348962|gb|EDK41523.2| hypothetical protein PGUG_05621 [Meyerozyma guilliermondii ATCC
6260]
Length = 666
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 331 GCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 389
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K LL L
Sbjct: 390 SRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDL 449
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 450 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTA 506
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ V+NYD P Y+HRI
Sbjct: 507 PILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRI 543
>gi|148263694|ref|YP_001230400.1| DEAD/DEAH box helicase [Geobacter uraniireducens Rf4]
gi|146397194|gb|ABQ25827.1| DEAD/DEAH box helicase domain protein [Geobacter uraniireducens
Rf4]
Length = 447
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 124/220 (56%), Gaps = 16/220 (7%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
K +I+++ P RL I + ID+SRVE LVLDEAD++F++G +LKH+ +
Sbjct: 118 KSGVEIVVACPGRLLDHIGQGTIDVSRVEVLVLDEADQMFDMGFFPDIRRILKHLPKQRQ 177
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
LFSAT+PD + LA +++D V V VG NTA ++ + K
Sbjct: 178 TL--------LFSATMPDEIRRLAHEVLNDPVTVQVG--NTAPPVTVSHALYPVEQHLKT 227
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L + + VL+F ++K RAK L +L G RA + +LSQ +R+ A+D FR
Sbjct: 228 PLLLELLRHTDTESVLVFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRD 287
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G +L+ATD+ ARG+D ++ V+NYD PD+ AY+HRI
Sbjct: 288 GTFQILVATDIAARGIDVSQISHVVNYDIPDTAEAYVHRI 327
>gi|361129216|gb|EHL01128.1| putative ATP-dependent RNA helicase rok1 [Glarea lozoyensis 74030]
Length = 199
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 16/171 (9%)
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
S + SL S T+ E+L +R++VG K++A +IK L +A +E GKLLALRQ
Sbjct: 3 SNIESLASTTIQSRREKLELDDDVPTIRLVVGLKDSAIPNIKHTLTYAATEPGKLLALRQ 62
Query: 154 ---------SFAESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQT 197
SL PP LIF Q+ RA L+ EL +D R V+HSDLS +
Sbjct: 63 LVHPTAKSSDGEHSLRPPFLIFTQTIPRAIALHSELFYDIPAEAGGSSRIAVLHSDLSDS 122
Query: 198 QRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R+N + FR G+ W+LI TD+++RG+DF+G+N V+NYD P+SGAAYIHR+
Sbjct: 123 ARDNVMTRFRKGEIWILITTDILSRGVDFRGINGVVNYDVPNSGAAYIHRV 173
>gi|418404623|ref|ZP_12978074.1| DEAD/DEAH box helicase domain-containing protein [Sinorhizobium
meliloti CCNWSX0020]
gi|359501422|gb|EHK74033.1| DEAD/DEAH box helicase domain-containing protein [Sinorhizobium
meliloti CCNWSX0020]
Length = 504
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + LIF ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|448107108|ref|XP_004200911.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|448110113|ref|XP_004201542.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|359382333|emb|CCE81170.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
gi|359383098|emb|CCE80405.1| Piso0_003521 [Millerozyma farinosa CBS 7064]
Length = 635
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 294 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPPVE 352
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K + L
Sbjct: 353 DRQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLL-D 411
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + N +IF ++K A L L G A IH D SQ +RE A+ F+ G +
Sbjct: 412 ILSANDNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALTAFKNGTAPI 471
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V+ V+NYD P Y+HRI
Sbjct: 472 LVATAVAARGLDIPNVSHVVNYDLPSDIDDYVHRI 506
>gi|365986773|ref|XP_003670218.1| hypothetical protein NDAI_0E01590 [Naumovozyma dairenensis CBS 421]
gi|343768988|emb|CCD24975.1| hypothetical protein NDAI_0E01590 [Naumovozyma dairenensis CBS 421]
Length = 608
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 139/262 (53%), Gaps = 25/262 (9%)
Query: 1 LATQTTRECKKLAKGNKFQ---------IKLMKKELVRSTDLSKFSCDILISTPLRLRLA 51
LATQ E KK + Q I +E+ R CD+L++TP RL
Sbjct: 229 LATQIFDEAKKFCYRSWVQPCVAYGGAPIGNQMREMDRG-------CDLLVATPGRLSDL 281
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSIVRS--LFSATLPDFV 108
I R KI LS V+YLVLDEAD++ ++G I +V+ P R +FSAT P +
Sbjct: 282 IDRGKISLSNVKYLVLDEADRMLDMG-FEPQIRAIVEGADMTPVGERQTLMFSATFPADI 340
Query: 109 EELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPPVLIF 166
+ LAR + D + + VGR + SE+I Q++++ +++ K LL L + + L LIF
Sbjct: 341 QHLARDFLADYIFLSVGRVGSTSENITQRVLYVENQDKKSALLDLLSASEDGL---TLIF 397
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V++K A +L L RA IH D +Q +RE A+ F++G +L+AT V ARG+D
Sbjct: 398 VETKRMADQLTDFLIMQNFRATAIHGDRTQAERERALAAFKSGAATLLVATAVAARGLDI 457
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
V VINYD P Y+HRI
Sbjct: 458 PNVTHVINYDLPGDIDDYVHRI 479
>gi|148906344|gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 142/257 (55%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM-----KKELVRSTDLSKFSCDILISTPLRLRLAIRRK 55
LA Q +E K +K + + K VR DLSK +I+I+TP RL + +
Sbjct: 184 LAVQIQQEAAKFGASSKIKNTCIYGGAPKGPQVR--DLSK-GVEIVIATPGRLIDMLESQ 240
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELA 112
+L RV YLVLDEAD++ ++G +P +K + P +SAT P VE LA
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMG-----FEPQIKKIVSQIRPDRQTLYWSATWPKEVELLA 295
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKE 171
R +H+ +VI+G + + +++V SE K L Q E ++ +LIF+++K+
Sbjct: 296 RQSLHNPYKVIIGSSDLKANHAIEQIVEIVSEHEKYTRLIQLLEEIMDGSRLLIFLETKK 355
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +F+AGK+ ++ ATDV ARG+D K + C
Sbjct: 356 GCDQVTRKLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDIKC 415
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 416 VINYDFPGSMEDYVHRI 432
>gi|222086716|ref|YP_002545250.1| ATP-dependent RNA helicase [Agrobacterium radiobacter K84]
gi|221724164|gb|ACM27320.1| ATP-dependent RNA helicase protein [Agrobacterium radiobacter K84]
Length = 556
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I R+ + L +V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 141 GTDILVATPGRLLDLISRRALSLGQVSYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 198
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA + + V+V V A++ ++Q + F + K L++S
Sbjct: 199 --TMLFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVSGQNHKTEILKES 256
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + + ++F+++K A++L L G A IH + SQ QRE A+ FR G+ VL
Sbjct: 257 ISANPDGRAMVFLRTKHGAEKLMKHLEHVGFAAASIHGNKSQGQRERALKGFRDGEVRVL 316
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 317 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 350
>gi|384532968|ref|YP_005715632.1| DEAD/DEAH box helicase [Sinorhizobium meliloti BL225C]
gi|333815144|gb|AEG07811.1| DEAD/DEAH box helicase domain protein [Sinorhizobium meliloti
BL225C]
Length = 504
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + LIF ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|334320464|ref|YP_004557093.1| DEAD/DEAH box helicase [Sinorhizobium meliloti AK83]
gi|384538673|ref|YP_005722757.1| putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti
SM11]
gi|407723120|ref|YP_006842781.1| DEAD/DEAH box helicase [Sinorhizobium meliloti Rm41]
gi|334098203|gb|AEG56213.1| DEAD/DEAH box helicase domain protein [Sinorhizobium meliloti AK83]
gi|336037326|gb|AEH83256.1| putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti
SM11]
gi|407323180|emb|CCM71781.1| DEAD/DEAH box helicase [Sinorhizobium meliloti Rm41]
Length = 504
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + LIF ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|255713670|ref|XP_002553117.1| KLTH0D09328p [Lachancea thermotolerans]
gi|238934497|emb|CAR22679.1| KLTH0D09328p [Lachancea thermotolerans CBS 6340]
Length = 551
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q EC K K ++ + + + R + + + +I+I+TP RL + K +
Sbjct: 196 LAVQIQTECSKFGKSSRIRNTCVYGGVPRGHQIRELTRGAEIVIATPGRLIDMLEIGKTN 255
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 256 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 310
Query: 116 MHDAVRVIVGR-KNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+HD ++V VG + AS +I Q ++V + +LL ++ +E + +LIF +K
Sbjct: 311 LHDPIQVNVGSLELAASHNIAQIVEVVSDMEKRDRLLKHLETASEDKDSKILIFASTKRT 370
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D +Q +R+ + +FR G + +++ATDV ARG+D KG+N V
Sbjct: 371 CDEITRYLRQDGWPALAIHGDKAQNERDWVLQEFRTGNSPIMVATDVAARGIDVKGINFV 430
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 431 INYDMPGNIEDYVHRI 446
>gi|68478729|ref|XP_716633.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|74656359|sp|Q5A4E2.1|DED1_CANAL RecName: Full=ATP-dependent RNA helicase DED1
gi|46438305|gb|EAK97638.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|238881007|gb|EEQ44645.1| ATP-dependent RNA helicase ded1 [Candida albicans WO-1]
Length = 672
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V+ C P++
Sbjct: 319 GCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVK 377
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ +E K + L
Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVIL-D 436
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + N ++F ++K A L L G A IH D SQ +RE A+ F+ G +
Sbjct: 437 LLSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPI 496
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 497 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 531
>gi|16264922|ref|NP_437714.1| ATP-dependent RNA helicase [Sinorhizobium meliloti 1021]
gi|15141061|emb|CAC49574.1| putative ATP-dependent RNA helicase protein [Sinorhizobium meliloti
1021]
Length = 503
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + LIF ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|433610674|ref|YP_007194135.1| Superfamily II DNA and RNA helicase [Sinorhizobium meliloti GR4]
gi|429555616|gb|AGA10536.1| Superfamily II DNA and RNA helicase [Sinorhizobium meliloti GR4]
Length = 504
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q+
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + LIF ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|372278653|ref|ZP_09514689.1| DEAD/DEAH box helicase [Oceanicola sp. S124]
Length = 440
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R+ +DLS+ LVLDEAD++ ++G + L+ I P +
Sbjct: 136 GTDILVATPGRLIDLMDRRAVDLSQTRQLVLDEADQMLDLGFIHALRKIAPKLGTPRR-- 193
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EEL+ + ++ RV V A++ I Q + F E K LR+
Sbjct: 194 --TMLFSATMPKQMEELSSAYLNHPKRVQVSPPGKAADKITQSIHFLPKTE-KPKKLREI 250
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ L+ L+F ++K A++L L DG A IH + SQ QR+ A+ FR G VL
Sbjct: 251 LSQDLDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQRDRAIKAFRDGTITVL 310
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV VINYD P+ Y+HRI
Sbjct: 311 VATDVAARGIDIPGVAYVINYDLPEVPDNYVHRI 344
>gi|398379083|ref|ZP_10537228.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
gi|397723550|gb|EJK84044.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
Length = 580
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I R+ + L +V YLVLDEAD++ ++G + L+ I +V A
Sbjct: 167 GTDILVATPGRLLDLISRRALSLGQVSYLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 224
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA + + V+V V A++ ++Q + F + K L++S
Sbjct: 225 --TMLFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVSGQNHKTEILKES 282
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + + ++F+++K A++L L G A IH + SQ QRE A+ FR G+ VL
Sbjct: 283 ISANPDGRAMVFLRTKHGAEKLMKHLEHVGFAAASIHGNKSQGQRERALKGFRDGEVRVL 342
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 343 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 376
>gi|295107314|emb|CBL04857.1| Superfamily II DNA and RNA helicases [Gordonibacter pamelaeae
7-10-1-b]
Length = 445
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 140/253 (55%), Gaps = 11/253 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q C +LAKG+ ++ + + LSK S DIL++TP RL + R +
Sbjct: 117 LALQIDAACTQLAKGSGLRVVTVVGGVPYKGQLSKLSRGVDILVATPGRLHDLMERGDVK 176
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK--ACSNPSIVRSL-FSATLPDFVEELARSI 115
L VE LVLDEAD++ ++G P +K + PS ++L FSATL V + +I
Sbjct: 177 LRDVEILVLDEADRMLDMGFW-----PTMKKIVAATPSSRQTLLFSATLDRKVMQSVSAI 231
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ D V V K S++I+Q +V GS + L LR AE + V++F +K RA+
Sbjct: 232 LRDPAFVEVAHKGETSDTIEQFIVPVGSMQKASL-LRLLLAERGSKRVIVFTDTKTRAEI 290
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
G+L G RA IHSD +Q QR+ A+ F G VL+ATDV+ARG+D + V+NY
Sbjct: 291 CTGQLKRAGFRAESIHSDKTQAQRKRALAAFSKGDVDVLVATDVLARGIDVPDIAYVVNY 350
Query: 236 DFPDSGAAYIHRI 248
+ P++ Y+HRI
Sbjct: 351 ELPENPDDYVHRI 363
>gi|358391018|gb|EHK40423.1| hypothetical protein TRIATDRAFT_41642 [Trichoderma atroviride IMI
206040]
Length = 715
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 117/223 (52%), Gaps = 43/223 (19%)
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK--------ACSNPSIVRSLFSATLPDFVEE 110
L V L+LDEAD L +DP+ + ACS+ + S +SAT+ +E
Sbjct: 372 LPTVRDLILDEADVL---------LDPLFREQTLGIWNACSSSDLRLSFWSATMGSNIET 422
Query: 111 L--------ARSI---MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF---- 155
L A S+ VR++VG K+TA +I +L++ SE+GKLL LRQ
Sbjct: 423 LVTEKLASRAESLGITQRPLVRLVVGLKDTAVPNIMHRLIYTASEQGKLLGLRQLLRPTS 482
Query: 156 ----AESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQTQRENAVD 204
L PP L+F Q+ ERA L EL +D R +HS L RE +
Sbjct: 483 SIDSGPPLRPPFLVFTQTIERATALQEELKYDIPLEAGGSSRIAALHSGLPDAAREAIMR 542
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
FRAG+ WVLI TDV+ARG+DF GVN V+NYD P S AAY+HR
Sbjct: 543 KFRAGEIWVLITTDVLARGVDFAGVNGVLNYDVPGSSAAYVHR 585
>gi|325192175|emb|CCA26630.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 627
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 141/253 (55%), Gaps = 9/253 (3%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA+Q E KK G + E+ R + CD+L++TP RL + R ++
Sbjct: 243 LASQIYDEAKKFCYCTGVAPVVLYGGAEVGRQVRELERGCDLLVATPGRLVDLMERGRVS 302
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSIMH 117
LS + +L+LDEAD++ ++G I +V+ P ++ +FSAT P ++ LA +
Sbjct: 303 LSGIRFLILDEADRMLDMG-FEPQIRRLVEQEDMPRERQTFMFSATFPREMQRLAADFLQ 361
Query: 118 DAVRVIVGRKNTASESIKQKLVF--AGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
D + + VGR +AS+ +KQ++ F +E L+ E L +L+FV++K A
Sbjct: 362 DYIFLTVGRVGSASKDVKQQIEFIEPHDKEDYLVRFLNQVQEGL---ILVFVETKRGADY 418
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L L +G A IH D +Q +RE A++ FR+G+T VL+ATDV ARG+D GV VIN+
Sbjct: 419 LEQLLCREGFPATSIHGDRTQREREAALNSFRSGRTPVLVATDVAARGLDINGVTHVINF 478
Query: 236 DFPDSGAAYIHRI 248
D P++ Y+HRI
Sbjct: 479 DLPNNIDDYVHRI 491
>gi|317052319|ref|YP_004113435.1| DEAD/DEAH box helicase domain-containing protein
[Desulfurispirillum indicum S5]
gi|316947403|gb|ADU66879.1| DEAD/DEAH box helicase domain protein [Desulfurispirillum indicum
S5]
Length = 457
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNP 93
DI+++TP RL +++K IDLS+VE+LVLDEAD++ ++G ++ K + + K N
Sbjct: 123 GVDIVVATPGRLLDHVQQKSIDLSKVEFLVLDEADRMLDMGFIHDIRKVLALLPKERQN- 181
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT + ELA S M D V+V V R+NTA+E++ Q + E + L L +
Sbjct: 182 ----LLFSATFSREITELASSFMKDPVQVEVARRNTAAETVDQVVHLVDRERKREL-LSK 236
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+E VL+F ++K A L +L DGI + IH + SQ+ R A+ DF+ G+ V
Sbjct: 237 LISEGKWQQVLVFTRTKHGANRLAQQLEKDGIHSAAIHGNKSQSARTKALADFKKGQVRV 296
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 297 LVATDIAARGLDIDELPHVVNFELPNVPEDYVHRI 331
>gi|159108104|ref|XP_001704325.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|15213754|gb|AAK92152.1| DEAD-box RNA helicase [Giardia intestinalis]
gi|157432385|gb|EDO76651.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 554
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 14/260 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA Q R C +LA + + L +KE V + ++ D++++TPL L + +
Sbjct: 177 LADQVARVCNQLAPSFRTML-LQRKETVTQSLINSKRHDVMVATPLVLLNFLTEGIVRFP 235
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVK-----------ACSNPSIVRSLFSATLPDFVE 109
++ +VLDE D L ++ ID V++ C V +LFSA++ D V
Sbjct: 236 NLQTIVLDEVDCLMN-PQFIEQIDAVLEWILKTNANTGGCCPANRPVFTLFSASVTDQVF 294
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQS 169
L + + D V++ V + ++KQ +FAG + K+ L+Q+ E PPVL+F +
Sbjct: 295 GLVNTFLVDPVQISVAGAGMPTNTVKQYFMFAGRDRYKMFTLQQAIIEYGKPPVLVFAST 354
Query: 170 KERAKELYGEL-AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+R +Y EL + G +H+ L++ QR V FR W+L+ TDV+ARG+DF
Sbjct: 355 SDRVFTIYKELICYVDWPTGYLHAGLTKNQRHEIVTKFRTADLWILVCTDVLARGLDFPR 414
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+ VIN+D P YIHRI
Sbjct: 415 IGLVINFDIPSDLTHYIHRI 434
>gi|227822942|ref|YP_002826914.1| dead-box ATP-dependent RNA helicase [Sinorhizobium fredii NGR234]
gi|227341943|gb|ACP26161.1| dead-box ATP-dependent RNA helicase [Sinorhizobium fredii NGR234]
Length = 520
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 8/215 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V P
Sbjct: 135 GVDILVATPGRLLDLVARKAVTLTQGRYLVLDEADQMLDLGFIHDLRKISKLV-----PK 189
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+Q
Sbjct: 190 NRQTLLFSATMPKQIAELAGEYLTDPVKVEVTPPGKAADKVEQYVHFVPGKDLKTTILKQ 249
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
S + + L+F ++K A++L L G +A IH + SQ QRE A+ FR G+ V
Sbjct: 250 SLTNNPDGLSLVFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKGFRDGEIRV 309
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 310 LVATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 344
>gi|395793251|ref|ZP_10472656.1| hypothetical protein MEI_01277 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713021|ref|ZP_17687281.1| hypothetical protein ME1_00027 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424647|gb|EJF90827.1| hypothetical protein ME1_00027 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395431565|gb|EJF97583.1| hypothetical protein MEI_01277 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 459
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 138/252 (54%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + +AKG L+ + R + + + D+LI+TP RLR +R K I+
Sbjct: 91 LAVQVDETIRAVAKGTHLSTCLVFGGVSRLKQIKRMNAGVDVLIATPGRLRDLVREKCIN 150
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+ +LVLDEAD++ ++G N ++HI ++ + LFSAT+P + LA+ ++
Sbjct: 151 LSQSRFLVLDEADRMLDMGFINDVRHIAKLLHQERQTA----LFSATMPKEITGLAKCLL 206
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+D V++ V + T + I QKL + E K + L + + V++F ++K A +
Sbjct: 207 NDPVKIEVSPQGTTAAEIIQKLYCVSTREKKNV-LCKLLTNPVFASVIVFTRTKHGADAV 265
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G IH + SQ R++A+ FR +L+ATD+ ARG+D G++ VINYD
Sbjct: 266 TRSLEKSGYSVATIHGNKSQNARQSALKAFRERAVQILVATDIAARGIDIPGISHVINYD 325
Query: 237 FPDSGAAYIHRI 248
PD +Y+HRI
Sbjct: 326 LPDEAESYVHRI 337
>gi|412988365|emb|CCO17701.1| predicted protein [Bathycoccus prasinos]
Length = 497
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 120/215 (55%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDILI+TP RL I R K+ L++ EYL LDEAD++ ++G I +V+ P
Sbjct: 178 GCDILIATPGRLIDLIDRAKVGLAKCEYLALDEADRMLDMG-FEPQIRQLVEQRDMPRTG 236
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT P ++ +A +HD V + VGR +++E I Q + + S K L
Sbjct: 237 ERQTMLFSATFPKEIQRMASDFLHDYVFLTVGRVGSSTELINQTVCYVPSYYDKTQML-L 295
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E++ L+FV++K A +L L G A IH D +Q +RE A+ FRAG+T +
Sbjct: 296 DLTEAVPGLTLVFVETKRGADQLEDFLCEQGKPATSIHGDRTQQEREAALKSFRAGRTPI 355
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V V+N+D P Y+HRI
Sbjct: 356 LVATDVAARGLDIPHVTHVVNFDLPTDIDDYVHRI 390
>gi|378826858|ref|YP_005189590.1| putative ATP-dependent RNA helicase protein [Sinorhizobium fredii
HH103]
gi|365179910|emb|CCE96765.1| putative ATP-dependent RNA helicase protein [Sinorhizobium fredii
HH103]
Length = 510
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLVARKAVTLTQGRYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L++S
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVTPPGKAADKVEQYVHFVPGKDLKTTILKRS 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + L+F ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTDNPDGLSLVFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKGFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|241953571|ref|XP_002419507.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223642847|emb|CAX43102.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 667
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V C P++
Sbjct: 320 GCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVDECDMPAVK 378
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K + L
Sbjct: 379 DRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDDEKKSVIL-D 437
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + N ++F ++K A L L G A IH D SQ +RE A+ F+ G +
Sbjct: 438 LLSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPI 497
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 498 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 532
>gi|378579002|ref|ZP_09827673.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
gi|377818357|gb|EHU01442.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
Length = 449
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAHQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ +V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVSQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGAIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 140/250 (56%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q K+ + + ++ ++ ++ D + C++LI+TP RL I +K +
Sbjct: 104 LADQVAESVKRYSHSSPLRVAVVFGGVDMNAQRDQLRKGCELLIATPGRLLDHIEQKNVS 163
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+V LVLDEAD++ ++G L ++ +V+ P LFSAT + + +LARS +++
Sbjct: 164 LSQVSVLVLDEADRMLDMG-FLPDLERIVRLLPKPR-QSLLFSATFSNDIRKLARSFLNN 221
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V + V +N +E++ Q E K L + +L+ V++FV +K A +
Sbjct: 222 PVEINVAPRNATAETVTQIAYPVAPNEKKAAVLYTLKSRNLSQ-VIVFVNTKIGASRVAR 280
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL +GI A IH D SQ +R A++ F++G+ VL+ATDV ARG+D G+ CVIN D P
Sbjct: 281 ELVSEGINAESIHGDRSQAERIKALEGFKSGEIAVLVATDVAARGLDVVGLPCVINMDLP 340
Query: 239 DSGAAYIHRI 248
+ Y+HRI
Sbjct: 341 YNAEDYVHRI 350
>gi|420241874|ref|ZP_14745969.1| DNA/RNA helicase, superfamily II [Rhizobium sp. CF080]
gi|398069204|gb|EJL60573.1| DNA/RNA helicase, superfamily II [Rhizobium sp. CF080]
Length = 579
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 116 NKQQMQLEK------------GTDILVATPGRLLDLISRRAIGLTTVRYLVLDEADQMLD 163
Query: 76 VGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V A LFSAT+P + +LA + D V+V V A++
Sbjct: 164 LGFIHDLRKISKMVPAKRQ----TLLFSATMPKAIADLASDFLKDPVQVSVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K L++S E+ + ++F+++K A++L L G + IH +
Sbjct: 220 VEQFVHFVAGKNDKTDLLKKSLEENPDGRAMVFLRTKHGAEKLSKHLEHIGFKVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR + VL+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKSFRDNEIRVLVATDVAARGIDIPGVTHVFNYDLPEVPDAYVHRI 334
>gi|395788494|ref|ZP_10468057.1| hypothetical protein ME7_01392 [Bartonella birtlesii LL-WM9]
gi|395408182|gb|EJF74798.1| hypothetical protein ME7_01392 [Bartonella birtlesii LL-WM9]
Length = 459
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + + +A+G L+ + R + + DILI+TP RLR IR K +D
Sbjct: 92 LAVQIDKTVRMVARGTHLSTCLVFGGVSRLKQIKHMAAGVDILIATPGRLRDLIREKCVD 151
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + H + + +LFSAT+P + L + ++ D
Sbjct: 152 LSQSRFLVLDEADRMLDMGFI--HDVRQIARLLHQDCQTALFSATMPKEITALVKCLLKD 209
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V++ V + T + I QKL + E K + L + V++F ++K A +
Sbjct: 210 PVKIEVSPQGTTATEITQKLYCVPTREKKNV-LSKLLTNPAFSSVIVFTRTKHGADAVTR 268
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L G IH + SQ+ R++A+ FR G +L+ATD++ARG+D G++ VINYD P
Sbjct: 269 SLIKIGYLVATIHGNKSQSARQSALKAFREGTVRILVATDIVARGIDIPGISHVINYDLP 328
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 329 DEAESYVHRI 338
>gi|389635125|ref|XP_003715215.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
gi|152013501|sp|A4RHF1.2|DED1_MAGO7 RecName: Full=ATP-dependent RNA helicase DED1
gi|351647548|gb|EHA55408.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
Length = 671
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 324 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQ 382
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 383 DRQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLD 442
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ LIFV++K A EL L + A IH D +Q +RE A++ FR G+ +
Sbjct: 443 LLSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPI 502
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 503 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 537
>gi|451979881|ref|ZP_21928289.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
gi|451762901|emb|CCQ89503.1| ATP-dependent RNA helicase rhlE [Nitrospina gracilis 3/211]
Length = 436
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 125/217 (57%), Gaps = 9/217 (4%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-- 92
K D+L++TP RL + ++ + L +VE VLDEAD++ ++G L P V+ +
Sbjct: 132 KRGVDVLVATPGRLLDLMEQRALRLDKVEIFVLDEADRMLDMGFL-----PDVRRIHSAL 186
Query: 93 PSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
P ++ LFSATLP V L + +HD V V V +T ++I QK++F E K L L
Sbjct: 187 PQKRQTMLFSATLPQEVRRLISTFLHDPVHVSVSPPSTTGKNIAQKILFVDKENKKAL-L 245
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
++ VL+F ++K A ++ L IRA IH + SQ R A++ FR+GKT
Sbjct: 246 ESLLGDAQIERVLVFTRTKHGANQVAKRLNQTRIRAEAIHGNKSQPARLQALEKFRSGKT 305
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD++ARG+D G+ VINY+ P +Y+HRI
Sbjct: 306 RVLVATDIVARGLDVDGITHVINYELPKEAESYVHRI 342
>gi|293397166|ref|ZP_06641440.1| ATP-dependent RNA helicase RhlE [Serratia odorifera DSM 4582]
gi|291420637|gb|EFE93892.1| ATP-dependent RNA helicase RhlE [Serratia odorifera DSM 4582]
Length = 447
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLSKLP-PK 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK VL
Sbjct: 240 IGEGDWRQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|358058712|dbj|GAA95675.1| hypothetical protein E5Q_02332 [Mixia osmundae IAM 14324]
Length = 693
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P ++
Sbjct: 298 GCDLLSATPGRLVDLIERGRISLANIQYLVLDEADRMLDMG-FEPQIRRIVEKEDMPGVM 356
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LA+ + D V + VGR + SE+I QK+ + E+ + + L
Sbjct: 357 DRQTLMFSATFPREIQYLAKDFLKDYVFLSVGRVGSTSENITQKVEYVEDEDKRSMLLDV 416
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+A LIFV++K A L G L + I A IH D SQ +RE A++ FR G+T V
Sbjct: 417 LYAIPPGGLTLIFVETKRMADMLEGFLRQNQIEATSIHGDRSQREREYALETFRTGRTPV 476
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++AT V ARG+D V V++YD P Y+HRI
Sbjct: 477 MVATAVAARGLDIPNVTHVVSYDLPSDIDDYVHRI 511
>gi|440468040|gb|ELQ37225.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae Y34]
gi|440487534|gb|ELQ67318.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae P131]
Length = 665
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 318 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQ 376
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 377 DRQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLD 436
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ LIFV++K A EL L + A IH D +Q +RE A++ FR G+ +
Sbjct: 437 LLSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPI 496
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 497 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 531
>gi|320527000|ref|ZP_08028189.1| putative ATP-dependent RNA helicase RhlE [Solobacterium moorei
F0204]
gi|320132585|gb|EFW25126.1| putative ATP-dependent RNA helicase RhlE [Solobacterium moorei
F0204]
Length = 459
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CDILI+TP RL + + +I LS +E VLDEAD++ ++G I V S R
Sbjct: 121 CDILIATPGRLNDFMVQGEIILSDIEVFVLDEADRMLDMG----FIGDVRTIASRIPEAR 176
Query: 98 S--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+FSAT+P ++ELA ++HD V + V + +E+I Q LV+ + K L L+
Sbjct: 177 QTVMFSATMPKEIKELANELLHDPVDIRVAPPASPAETITQYLVYCEKADKKRL-LKDML 235
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
++F ++K A L +L DGI+ IH D +Q QR+NA+ FR + VL+
Sbjct: 236 VSPEVTKAIVFTRTKIGADRLTKKLIEDGIKVLTIHGDKTQGQRQNALQRFRTNQVDVLV 295
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D G++ V NYD P+ +YIHRI
Sbjct: 296 ATDVAARGIDISGISHVFNYDLPEEDESYIHRI 328
>gi|444352450|ref|YP_007388594.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
gi|443903280|emb|CCG31054.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes EA1509E]
Length = 446
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKREL-LSQL 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|254417807|ref|ZP_05031531.1| DEAD/DEAH box helicase domain protein [Brevundimonas sp. BAL3]
gi|196183984|gb|EDX78960.1| DEAD/DEAH box helicase domain protein [Brevundimonas sp. BAL3]
Length = 510
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 129/215 (60%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 95
DIL++ P RL I++K +DLS E LVLDEAD++ ++G I P+ + S P+
Sbjct: 139 GLDILVAAPGRLLDHIQQKNLDLSSTEILVLDEADQMLDLG----FIKPIRQIVSRIPAK 194
Query: 96 VRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-RQ 153
++LF SAT+P + +LA ++ D V+V V ++T + I Q +V E+G+ AL +
Sbjct: 195 RQNLFFSATMPTEIGKLAGELLKDPVKVQVTPQSTTVQRISQSVVHV--EQGRKRALLTE 252
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
F++ L+F ++K A ++ L G+ AG IH + SQ QRE +D F+ GK V
Sbjct: 253 MFSDPEYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERTLDAFKKGKLRV 312
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D GV+ V+N++ P AY+HRI
Sbjct: 313 LVATDIAARGIDVDGVSHVVNFELPHVPEAYVHRI 347
>gi|410077537|ref|XP_003956350.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
gi|372462934|emb|CCF57215.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
Length = 511
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 128/217 (58%), Gaps = 9/217 (4%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 98
++++TP RL I+ ++LS+V+YLVLDEAD++ E G + I ++K + R
Sbjct: 220 VVVATPGRLLDLIQEGSVNLSKVQYLVLDEADRMLEKG-FEEDIKNIIKETNGNRANRQT 278
Query: 99 -LFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 153
+F+AT P V ELA + M D V+V +G ++ TA++ I Q ++V ++E KLL L +
Sbjct: 279 LMFTATWPKEVRELASTFMRDPVKVSIGNRDELTANKRITQIVEVVEPHTKERKLLDLLK 338
Query: 154 SF--AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ N VLIF K+ A + L ++G IH DLSQ QR A++DF+ GK+
Sbjct: 339 KYQGGAKKNDKVLIFALYKKEAARVERNLRYNGYDVAAIHGDLSQQQRTQALNDFKQGKS 398
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 399 SLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 435
>gi|383455776|ref|YP_005369765.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
gi|380732540|gb|AFE08542.1| putative ATP-dependent RNA helicase RhlE [Corallococcus coralloides
DSM 2259]
Length = 484
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + + L +E VLDEAD++ ++G + + V+K P +
Sbjct: 124 GVDILVATPGRLLDLIDQGFVTLRALEVFVLDEADRMLDMG-FIHDVRRVIKVL--PPVR 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++LF SATLP + +LAR+I+ + VRV V ++ ++++ Q++ F EE + L
Sbjct: 181 QTLFFSATLPPDIMDLARNILKEPVRVEVSPASSTADTVSQQVYFVEREEKRALLTHLLQ 240
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
P L+F ++K A + +L G+RA IH + SQ RE A+D+FRAG VL+
Sbjct: 241 DAKAIPRALVFTRTKHGANRVAKQLTAAGVRADAIHGNKSQNARERALDEFRAGTLRVLV 300
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ V NYD P+ Y+HRI
Sbjct: 301 ATDIAARGIDIDGLSHVFNYDLPNVPEQYVHRI 333
>gi|261251247|ref|ZP_05943821.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417956619|ref|ZP_12599583.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260938120|gb|EEX94108.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342809459|gb|EGU44578.1| ATP-dependent RNA helicase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 419
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 124/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDILI+TP RL + K I+L++ +YLVLDEAD++ ++G + I ++K C N
Sbjct: 128 GCDILIATPGRLLDHLFCKNINLTKTQYLVLDEADRMLDMG-FMPDIKRILKRC-NEERQ 185
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT ++ +A ++ + V V V N+ +E++KQ +V+ ++ K L
Sbjct: 186 TMFFSATFDKRIKTIAYKMLSEPVEVQVTPSNSTAETVKQ-MVYPVDKKRKAELLAYLIG 244
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K+ + L EL DGI+A I+ D SQ R+ A+DDF++G+ LIA
Sbjct: 245 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGQVRALIA 304
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+N+D P Y+HRI
Sbjct: 305 TDVAARGLDIQQLEQVVNFDMPYKAEDYVHRI 336
>gi|336249396|ref|YP_004593106.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
gi|334735452|gb|AEG97827.1| ATP-dependent RNA helicase RhlE [Enterobacter aerogenes KCTC 2190]
Length = 446
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKREL-LSQL 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|323306983|gb|EGA60267.1| Dbp1p [Saccharomyces cerevisiae FostersO]
Length = 452
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 122 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 180
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 181 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 240
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 241 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 297
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 298 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 334
>gi|254572992|ref|XP_002493605.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238033404|emb|CAY71426.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328354565|emb|CCA40962.1| ATP-dependent RNA helicase DDX5/DBP2 [Komagataella pastoris CBS
7435]
Length = 537
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 19/259 (7%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM-----KKELVRSTDLSKFSCDILISTPLRLRLAIRRK 55
LA Q +EC K ++ + + K + +R DL++ +I+I+TP RL +
Sbjct: 185 LAVQIQKECSKFGSSSRIRNTCVYGGVPKGQQIR--DLAR-GAEIVIATPGRLIDMLETG 241
Query: 56 KIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
K +L RV YLVLDEAD++ ++G + K +D + P ++SAT P V+ LA
Sbjct: 242 KTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-----RPDRQTLMWSATWPKSVQALA 296
Query: 113 RSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQS 169
R +HD ++V VG + AS +IKQ + E +L + +E +L+F +
Sbjct: 297 RDYLHDYIQVNVGSLELAASHNIKQVIEVLSEYEKRDRLTKYLEQASEDKTSKILVFAST 356
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
K EL L DG A IH D Q +R+ + +FR+GK+ +++ATDV ARG+D KG+
Sbjct: 357 KRTCDELTTYLRSDGWPALAIHGDKEQRERDWVLQEFRSGKSPIMVATDVAARGIDVKGI 416
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P + Y+HRI
Sbjct: 417 NFVVNYDMPGNIEDYVHRI 435
>gi|289548721|ref|YP_003473709.1| DEAD/DEAH box helicase [Thermocrinis albus DSM 14484]
gi|289182338|gb|ADC89582.1| DEAD/DEAH box helicase domain protein [Thermocrinis albus DSM
14484]
Length = 365
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 2/216 (0%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
LS +++ TP R++ I R I L +V + VLDEAD + ++G ++ I+ +V N
Sbjct: 115 LSTVPPHVVVGTPGRIKDLIGRGYISLEKVRFFVLDEADLMLDMG-FIEDIEYIVSHLPN 173
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
+FSATLP VEELA+ + + RV+ I+++L+ S KL L
Sbjct: 174 RRQT-FMFSATLPRQVEELAKRYLREHYRVVKVYTPELRPKIEERLIRLSSSAQKLSELE 232
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ E L V++FV++K+ AK+L+ L G A +H D++Q QRE+A+ FR GK
Sbjct: 233 KILREHLLEKVIVFVKTKKDAKDLHEVLRRKGFNAVALHGDMTQRQRESALKLFRDGKVK 292
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+++ATDV +RG+D KGV VINY P+ YIHRI
Sbjct: 293 IVVATDVASRGLDIKGVGLVINYHLPEDPEIYIHRI 328
>gi|406602489|emb|CCH45957.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 644
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R I L ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 294 GCDLLVATPGRLNDLLERGVISLRNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPPVE 352
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VG+ + SE+I QK+++ +E + + L
Sbjct: 353 ERQTLMFSATFPTDIQMLARDFLKDYIFLSVGKVGSTSENITQKVLYVEDDEKRSVLLDI 412
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A+ N LIFV++K A L L A IH D +Q +RE A++ FR+GK +
Sbjct: 413 LSADE-NGLTLIFVETKRMADALSDFLINTNFPATSIHGDRTQNERERALEYFRSGKAPI 471
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 472 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 506
>gi|153009469|ref|YP_001370684.1| DEAD/DEAH box helicase [Ochrobactrum anthropi ATCC 49188]
gi|151561357|gb|ABS14855.1| DEAD/DEAH box helicase domain protein [Ochrobactrum anthropi ATCC
49188]
Length = 464
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + + ++K L+ + + + + + + D+LI+TP RL +R +D
Sbjct: 100 LAVQIEQTIRNVSKHAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVD 159
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + KA + +LFSAT+P + LA S++HD
Sbjct: 160 LSQTRWLVLDEADRMLDMG-FINDVKRIAKATHSDRQT-ALFSATMPKEIASLAGSLLHD 217
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V + T + I Q + ++E + L L + V++F ++K A +
Sbjct: 218 PVRVEVAPQGTTAAEITQVVHPVHTKEKRRL-LSALLGDKAMRSVIVFTRTKHGADAVVR 276
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L DG IH + SQ R+ A++ FR G +LIATD+ ARG+D G++ V+NYD P
Sbjct: 277 HLERDGYEVAAIHGNKSQNARQRALNGFRDGSLRILIATDIAARGIDVPGISHVVNYDLP 336
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 337 DEPETYVHRI 346
>gi|163868666|ref|YP_001609875.1| ATP-dependent RNA helicase [Bartonella tribocorum CIP 105476]
gi|161018322|emb|CAK01880.1| ATP-dependent RNA helicase [Bartonella tribocorum CIP 105476]
Length = 467
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + +AKG L+ + R + + + D+LI+TP RLR +R K +D
Sbjct: 103 LAVQIDEAIRTMAKGAHLSTCLVFGGVSRLKQIKRMAAGVDVLIATPGRLRDLVREKCVD 162
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +L+LDEAD++ ++G + + + K +LFSAT+P + LA+ +++D
Sbjct: 163 LSQSRFLILDEADRMLDMG-FIHDVKQIAKLLHQERQT-ALFSATMPKEIAALAKCLLND 220
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V++ V + T + I QKL + E K + L + V++F ++K A +
Sbjct: 221 PVKIEVAPQGTTALEITQKLYCVPTSEKKNV-LSKLLTNPAFDSVIVFTRTKHGADAVTL 279
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
LA +G IH + SQ R++A+ FR +L+ATD+ ARG+D G++ VINYD P
Sbjct: 280 HLAKNGYLVATIHGNKSQGARQSALKAFRERSVKILVATDIAARGIDIPGISHVINYDLP 339
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 340 DEAESYVHRI 349
>gi|323352003|gb|EGA84542.1| Dbp1p [Saccharomyces cerevisiae VL3]
Length = 551
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 221 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 279
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 280 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSXLLDL 339
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 340 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 396
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 397 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 433
>gi|50419477|ref|XP_458265.1| DEHA2C13486p [Debaryomyces hansenii CBS767]
gi|74659403|sp|Q6BU54.1|DED1_DEBHA RecName: Full=ATP-dependent RNA helicase DED1
gi|49653931|emb|CAG86342.1| DEHA2C13486p [Debaryomyces hansenii CBS767]
Length = 630
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 289 GCDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 347
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K LL L
Sbjct: 348 DRQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDL 407
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F+ G
Sbjct: 408 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKTGTA 464
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ ++NYD P Y+HRI
Sbjct: 465 PILVATAVAARGLDIPNVSHIVNYDLPSDIDDYVHRI 501
>gi|320538877|ref|ZP_08038553.1| putative RNA helicase [Serratia symbiotica str. Tucson]
gi|320031037|gb|EFW13040.1| putative RNA helicase [Serratia symbiotica str. Tucson]
Length = 437
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL L + + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRL-LDLEQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 177
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 178 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVYFVDKKRKREL-LS 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 237 QMIGAGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKEGKIR 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 297 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 332
>gi|254585603|ref|XP_002498369.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
gi|238941263|emb|CAR29436.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
Length = 539
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 7/218 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ ++++TP RL I + +DLS+V+YLVLDEAD++ E G + I ++ ++
Sbjct: 247 NSQVVVATPGRLLDLINEQSVDLSQVQYLVLDEADRMLEKG-FEEDIKNIINQTNSRDRQ 305
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALR 152
+F+AT P V ELA + M D V+V +G ++ +A++ I Q +++ ++ KLL L
Sbjct: 306 TLMFTATWPKEVRELASTFMRDPVKVSIGNRDELSANKRITQIVEVIEPRQKDRKLLELL 365
Query: 153 QSFAESL--NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ + + VLIF K+ A + L ++G IH DLSQ QR +A++DF+AGK
Sbjct: 366 RKYQSGAKKDDKVLIFALYKKEASRVENNLKYNGYDVAAIHGDLSQQQRTSALNDFKAGK 425
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 426 SNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 463
>gi|410082495|ref|XP_003958826.1| hypothetical protein KAFR_0H02820 [Kazachstania africana CBS 2517]
gi|372465415|emb|CCF59691.1| hypothetical protein KAFR_0H02820 [Kazachstania africana CBS 2517]
Length = 611
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L V YL+LDEAD++ ++G I +V+ C P +
Sbjct: 270 GCDLLVATPGRLNDLLERGKISLMNVRYLILDEADRMLDMG-FEPQIRHIVEDCDMPEVQ 328
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + V + VGR + SE+I QK++ + K LL L
Sbjct: 329 DRQTLMFSATFPRDIQHLARDFLKNYVFLSVGRVGSTSENITQKIIMVEDMDKKSALLDL 388
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
E L LIFV++K A +L L A IH D +Q +RE A+ F+AG+
Sbjct: 389 LAYQHEGL---TLIFVETKRMADQLTDFLIMQNFNATAIHGDRTQEERERALGAFKAGRA 445
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 446 DILVATAVAARGLDIPNVTLVINFDLPSDIDDYVHRI 482
>gi|398354591|ref|YP_006400055.1| ATP-dependent RNA helicase RhlE [Sinorhizobium fredii USDA 257]
gi|390129917|gb|AFL53298.1| ATP-dependent RNA helicase RhlE [Sinorhizobium fredii USDA 257]
Length = 513
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I RK + L++ YLVLDEAD++ ++G + L+ I +V N
Sbjct: 125 GVDILVATPGRLLDLIARKAVTLTQGRYLVLDEADQMLDLGFIHDLRKISKLV--PKNRQ 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA + D V+V V A++ ++Q + F ++ K L+++
Sbjct: 183 TL--LFSATMPKLIAELAGEYLTDPVKVEVTPPGKAADKVEQYVHFVPGKDLKTTILKRT 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + L+F ++K A++L L G +A IH + SQ QRE A+ FR G+ VL
Sbjct: 241 LTDNPDGLSLVFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV V NYD P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRI 334
>gi|395767239|ref|ZP_10447774.1| hypothetical protein MCS_00707 [Bartonella doshiae NCTC 12862]
gi|395414552|gb|EJF80994.1| hypothetical protein MCS_00707 [Bartonella doshiae NCTC 12862]
Length = 470
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 13/254 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + AKG L+ + R + + DIL++TP RL +R K +D
Sbjct: 102 LAVQIEETMRFFAKGTHLSTCLIFGGVSRLKQIKRMEAGVDILVATPGRLMDLVREKYVD 161
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + K +LFSAT+P + ELA+ ++ D
Sbjct: 162 LSQTRFLVLDEADRMLDMG-FIHDVRQITKLLHKERQT-ALFSATMPKEISELAKCLLSD 219
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP----VLIFVQSKERAK 174
VR+ V + T I QKL + E K + A+ L P V++F ++K A
Sbjct: 220 PVRIEVVPQGTTVAGITQKLYCVPTREKKNI-----LAKLLTNPDFSSVIVFTRTKHGAD 274
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+ LA G IH + SQ R+ A+ FR +L+ATD+ ARG+D GV+ VIN
Sbjct: 275 AVTRHLARIGYSVATIHGNKSQNARQYALKAFRERSVQILVATDIAARGIDIPGVSHVIN 334
Query: 235 YDFPDSGAAYIHRI 248
YD PD +Y+HRI
Sbjct: 335 YDLPDEAESYVHRI 348
>gi|323335026|gb|EGA76316.1| Dbp1p [Saccharomyces cerevisiae Vin13]
gi|365762783|gb|EHN04316.1| Dbp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 617
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|190407839|gb|EDV11104.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
Length = 617
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|410640695|ref|ZP_11351225.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
gi|410139723|dbj|GAC09412.1| ATP-dependent RNA helicase rhlB [Glaciecola chathamensis S18K6]
Length = 428
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 127/216 (58%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+ISTP RL + K I+L+ VE++VLDEAD++ ++G I V + +
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNIELANVEFVVLDEADRMLDMG----FISDVRQMLAQIR 177
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
VR LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 178 AVRQTLLFSATISPTVNELAHKLLKNHEEIRATQLNSAADTV-QHVMYPVSEEDKIRLFK 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
AE VL+F +KE+A +L L I AGV H+D SQ R A+ DF++ K
Sbjct: 237 TLLAEQNWYQVLVFTSTKEQADKLMAALKNSKINAGVCHADKSQGARRRAIADFKSAKLQ 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VLIAT+V ARG+D +G++ V+NY+ P Y+HRI
Sbjct: 297 VLIATEVAARGIDIQGLDHVVNYNLPYLPEDYVHRI 332
>gi|349581699|dbj|GAA26856.1| K7_Dbp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 617
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|238784236|ref|ZP_04628248.1| ATP-dependent RNA helicase rhlE [Yersinia bercovieri ATCC 43970]
gi|238714803|gb|EEQ06803.1| ATP-dependent RNA helicase rhlE [Yersinia bercovieri ATCC 43970]
Length = 451
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPVSVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|6325138|ref|NP_015206.1| Dbp1p [Saccharomyces cerevisiae S288c]
gi|1706311|sp|P24784.2|DBP1_YEAST RecName: Full=ATP-dependent RNA helicase DBP1; AltName: Full=DEAD
box protein 1; AltName: Full=Helicase CA1
gi|1163095|gb|AAB68243.1| Dbp1p: putative ATP-dependent DEAD box RNA helicase [Saccharomyces
cerevisiae]
gi|256274187|gb|EEU09095.1| Dbp1p [Saccharomyces cerevisiae JAY291]
gi|259150039|emb|CAY86842.1| Dbp1p [Saccharomyces cerevisiae EC1118]
gi|285815423|tpg|DAA11315.1| TPA: Dbp1p [Saccharomyces cerevisiae S288c]
gi|323346178|gb|EGA80468.1| Dbp1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392295891|gb|EIW06994.1| Dbp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 617
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|332306838|ref|YP_004434689.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410648227|ref|ZP_11358641.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
gi|332174167|gb|AEE23421.1| DEAD/DEAH box helicase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410132246|dbj|GAC07040.1| ATP-dependent RNA helicase rhlB [Glaciecola agarilytica NO2]
Length = 428
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 127/216 (58%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+ISTP RL + K I+L+ VE++VLDEAD++ ++G I V + +
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNIELANVEFVVLDEADRMLDMG----FISDVRQMLAQIR 177
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
VR LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 178 AVRQTLLFSATISPTVNELAHKLLKNHEEIRATQLNSAADTV-QHVMYPVSEEDKIRLFK 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
AE VL+F +KE+A +L L I AGV H+D SQ R A+ DF++ K
Sbjct: 237 TLLAEQNWYQVLVFTSTKEQADKLMAALKNSKINAGVCHADKSQGARRRAIADFKSAKLQ 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VLIAT+V ARG+D +G++ V+NY+ P Y+HRI
Sbjct: 297 VLIATEVAARGIDIQGLDHVVNYNLPYLPEDYVHRI 332
>gi|238798926|ref|ZP_04642391.1| ATP-dependent RNA helicase rhlE [Yersinia mollaretii ATCC 43969]
gi|238717236|gb|EEQ09087.1| ATP-dependent RNA helicase rhlE [Yersinia mollaretii ATCC 43969]
Length = 451
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPVSVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|323302724|gb|EGA56530.1| Dbp1p [Saccharomyces cerevisiae FostersB]
Length = 617
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|335044249|ref|ZP_08537274.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
gi|333787495|gb|EGL53379.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
Length = 403
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN------LLKHIDPVVKAC 90
CD++I+TP RL + + + DLS +E++V+DEAD++ ++G LL I + C
Sbjct: 122 GCDVIIATPGRLLNLVEQDQADLSLIEFVVIDEADRMLDMGQGPDVATLLASITTAFQTC 181
Query: 91 SNPSIVRSLFSATLPDF-VEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 149
LFSATL VE A +++ DA RV V N +E ++Q++ A + E K
Sbjct: 182 --------LFSATLAGAGVEIFANTLLPDATRVDVNASNQYAEQVQQRVYLADNREHKQA 233
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
L L+F KERA E+ L I A V+H + SQ R FR G
Sbjct: 234 LLTAVINSDDCKSALVFCNKKERADEVADYLQSQNISAQVVHGEFSQADRRERTRKFRQG 293
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
KT VL+ATDV +RG+D V+ VINYD P G YIHR+
Sbjct: 294 KTKVLVATDVASRGLDLPQVSHVINYDVPFRGDIYIHRV 332
>gi|160380607|sp|A6ZWD3.1|DBP1_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP1; AltName: Full=DEAD
box protein 1; AltName: Full=Helicase CA1
gi|151942679|gb|EDN61025.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 617
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|3641|emb|CAA39465.1| DBP1 [Saccharomyces cerevisiae]
Length = 618
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 288 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 346
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 347 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 406
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 407 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 463
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 464 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 500
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK Q+ + + + K C+I+++TP RL ++ K +
Sbjct: 299 LAHQIYLEAKKFAKPYNLQVAAVYGGVSKFDQFKELKAGCEIVVATPGRLIDLLKMKALK 358
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 359 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 413
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 414 LSDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLIEKMPGMIDDGDVLVFAAKKARVD 473
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G + +H D Q R + +F++G VL+ATDV ARG+D K + V+N
Sbjct: 474 EIENQLNQRGFKVAALHGDKDQASRMETLQNFKSGTYHVLVATDVAARGLDIKSIKTVVN 533
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 534 FDIAKEMDMHIHRI 547
>gi|374384807|ref|ZP_09642324.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
gi|373227611|gb|EHP49924.1| hypothetical protein HMPREF9449_00710 [Odoribacter laneus YIT
12061]
Length = 397
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 137/226 (60%), Gaps = 8/226 (3%)
Query: 25 KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKH 82
K+LV++T L + DIL++TP RL + + +DLS +++ VLDEAD++ ++G N +K
Sbjct: 136 KQLVQTTALRR-GVDILVATPGRLLDLMNQGFVDLSSLKHFVLDEADRMLDMGFINDIKR 194
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 142
I ++K + + LFSAT+P + L+ SI+ VRV V ++ ++++Q + F
Sbjct: 195 I--LLKLPAQHQTL--LFSATMPQSIAALSASILKKPVRVEVNPVSSPVDTVEQCIYFVE 250
Query: 143 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENA 202
+ K L L Q + + VL+F ++K A + L+ +GIR IH + SQ QR+ A
Sbjct: 251 KMKKKNL-LVQLLGQDIKKSVLVFSRTKHGADNIARSLSKEGIRTESIHGNKSQGQRQRA 309
Query: 203 VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ F++GK V++ATD+ ARG+D + VINYD PD+ Y+HRI
Sbjct: 310 LNAFKSGKVKVMVATDIAARGIDIDRLEMVINYDLPDTAETYVHRI 355
>gi|3986287|dbj|BAA34994.1| DjVLGB [Dugesia japonica]
Length = 781
Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 125/218 (57%), Gaps = 6/218 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ C +L++TP RL I + KI L +Y+VLDEAD++ ++G I +++ + PS
Sbjct: 309 QMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMG-FEPQIRKIIEESNMPS 367
Query: 95 IVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
+ +FSAT P +++LA +++ + + VGR + S+SIKQ++++ E KL L
Sbjct: 368 GINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVE-KLNYL 426
Query: 152 RQSFAESL-NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ F + N +LIFV++K+ A L L G IH D SQ +RE A+ FR G+
Sbjct: 427 KNIFNTTAPNTLILIFVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAALSMFRNGQ 486
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 487 CPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHRI 524
>gi|254491416|ref|ZP_05104595.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxidans
DMS010]
gi|224462894|gb|EEF79164.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxydans
DMS010]
Length = 402
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 135/255 (52%), Gaps = 13/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q L K N+ I ++ + L+ CDI+I+TP RL + ++ D
Sbjct: 84 LAFQIQHVIHHLGKANQPHIAMVTGGQAPTAQLAYLENGCDIVIATPGRLLNLVENEQAD 143
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLP-DFVEELARSIMH 117
LS +E++V+DEAD++ ++G + V A + SLFSATL VE A +++
Sbjct: 144 LSEIEFVVIDEADRMLDMGQGPDVAN--VLATITTAFQTSLFSATLAGSGVELFANALLP 201
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLA--LRQSFAESLNPPVLIFVQSKERA 173
+A R+ V N ++ + Q++ A + E K LLA ++Q+ ES LIF KERA
Sbjct: 202 NASRIEVDAANQYAQQVSQQVYLADNREHKQALLAAVIKQTDCES----ALIFCNKKERA 257
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+E+ L I A V+H D +Q R FR GK L+ATDV ARG+D V+ VI
Sbjct: 258 EEVSAFLQSQNISAQVVHGDFNQADRRERTRKFRQGKVKALVATDVAARGLDLPQVSHVI 317
Query: 234 NYDFPDSGAAYIHRI 248
NYD P G YIHR+
Sbjct: 318 NYDVPFRGDIYIHRV 332
>gi|448241070|ref|YP_007405123.1| ATP-dependent RNA helicase [Serratia marcescens WW4]
gi|445211434|gb|AGE17104.1| ATP-dependent RNA helicase [Serratia marcescens WW4]
Length = 459
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ G+
Sbjct: 238 QMIGEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGRIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|343515522|ref|ZP_08752575.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
gi|342798212|gb|EGU33838.1| putative ATP-dependent RNA helicase [Vibrio sp. N418]
Length = 426
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNP 93
+ DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 122 ELGVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKP 180
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 181 QTM--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSE 237
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F+ GK V
Sbjct: 238 LIGRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQSARRRALDEFKEGKARV 297
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+IATDV ARG+D + + V+N+D P Y+HRI
Sbjct: 298 MIATDVAARGLDIQNLPHVVNFDMPFLAEDYVHRI 332
>gi|323493912|ref|ZP_08099029.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
gi|323311853|gb|EGA65000.1| ATP-dependent RNA helicase [Vibrio brasiliensis LMG 20546]
Length = 419
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDILI+TP RL + K I+L + EYLVLDEAD++ ++G + I +++ C N
Sbjct: 128 GCDILIATPGRLIDHMYCKNINLHKTEYLVLDEADRMLDMG-FMPDIKRILQRC-NDDRQ 185
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT ++ +A ++ + V V V N+ +E++KQ +V+ ++ K L
Sbjct: 186 TLFFSATFDKRIKTIAYRMLEEPVEVQVSPSNSTAETVKQ-MVYPVDKKRKAELLAYLIG 244
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K+ + L EL DGI+A I+ D SQ R+ A+DDF++G+ LIA
Sbjct: 245 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGQVRALIA 304
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+N+D P Y+HRI
Sbjct: 305 TDVAARGLDIQQLEQVVNFDMPYKAEDYVHRI 336
>gi|90414211|ref|ZP_01222192.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
gi|90324761|gb|EAS41299.1| putative ATP-dependent RNA helicase [Photobacterium profundum 3TCK]
Length = 431
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DIL++TP RL + K + L+ +E+LV DEAD++ ++G + + + SNP I+
Sbjct: 125 VDILVATPGRLIEHVDLKNVSLTNIEFLVFDEADRMLDMGFITDMRKVMGEVNSNPQIM- 183
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
+FSAT + LA I+ R++V R+NT ++++ +V+ +E K L + +
Sbjct: 184 -MFSATSSKQMNALASDILRKPKRIMVDRENTTADTVAH-VVYPVDQERKRELLSELIGK 241
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F+ GK V++AT
Sbjct: 242 KNWKQVLVFVNYKETANELVKELKKDGIKAVLCHGDKAQSARRRALDEFKEGKARVMVAT 301
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+V ARG+D + + V+N+D P Y+HRI
Sbjct: 302 EVAARGLDIQALPHVVNFDMPFLAEDYVHRI 332
>gi|386713333|ref|YP_006179656.1| ATP-dependent RNA helicase [Halobacillus halophilus DSM 2266]
gi|118639520|gb|ABL09512.1| ATP-dependent RNA helicase [Halobacillus halophilus DSM 2266]
gi|384072889|emb|CCG44380.1| ATP-dependent RNA helicase [Halobacillus halophilus DSM 2266]
Length = 395
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 10/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK-KELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDL 59
LA Q T E +KL + + + +++ + I+I+TP R+ +RR I L
Sbjct: 83 LALQITEEVRKLKTEDMHVLAVYGGQDVAKQAHKLDGQAHIVIATPGRMLDHLRRGTISL 142
Query: 60 SRVEYLVLDEADKLFEVGNLLKHIDPVVK--ACSNPSIVRS-LFSATLPDFVEELARSIM 116
V+Y+VLDEAD++ E G L P VK P ++ LFSAT+ V +L + I+
Sbjct: 143 EAVKYMVLDEADQMLEAGFL-----PDVKDILSQTPEAKQTMLFSATITTQVNQLGKKIL 197
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
D R+ V K E IKQ LV+ ++ K L + E LIF ++K RA++L
Sbjct: 198 KDPRRITVQEKTVTLEGIKQ-LVYETTDRAKQDTLIEIMQEHRPFLALIFCRTKRRARKL 256
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G A +H DLSQ +RE + FR K L+ATDV ARG+D +GV V NYD
Sbjct: 257 NDALLSHGFEADELHGDLSQAKREKVMKRFRDAKIQYLVATDVAARGLDVEGVTHVFNYD 316
Query: 237 FPDSGAAYIHRI 248
P +YIHRI
Sbjct: 317 IPQDPESYIHRI 328
>gi|363756356|ref|XP_003648394.1| hypothetical protein Ecym_8298 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891594|gb|AET41577.1| Hypothetical protein Ecym_8298 [Eremothecium cymbalariae
DBVPG#7215]
Length = 638
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS
Sbjct: 286 EHGCDLIVATPGRLNDLLERGKISLCNVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPS 344
Query: 95 IVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
+ +FSAT P ++ LA + D + + VGR + SE+I QK+++ + K L
Sbjct: 345 VENRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLYV-EDLDKRSVL 403
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
A S L+FV++K A L L + A IH D SQ +RE A+ FR +
Sbjct: 404 LDLLAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRSQAERERALQFFRTARA 463
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 464 NILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 500
>gi|343502075|ref|ZP_08739937.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|418478063|ref|ZP_13047178.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342815654|gb|EGU50567.1| ATP-dependent RNA helicase [Vibrio tubiashii ATCC 19109]
gi|384574338|gb|EIF04810.1| ATP-dependent RNA helicase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 419
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 131/221 (59%), Gaps = 4/221 (1%)
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
V++ +LS+ CDILI+TP RL + K I+L + +YL+LDEAD++ ++G + I ++
Sbjct: 120 VQTRNLSE-GCDILIATPGRLLDHMFCKNINLFKTQYLILDEADRMLDMG-FMPDIKRIL 177
Query: 88 KACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 147
K C N FSAT ++ +A ++++ V V V N+ +E++KQ +V+ ++ K
Sbjct: 178 KRC-NEERQTLFFSATFDKRIKTIAYKMLNEPVEVQVTPSNSTAETVKQ-MVYPVDKKRK 235
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
L VL+F ++K+ + L EL DGI+A I+ D SQ R+ A+DDF+
Sbjct: 236 AELLAYLIGSRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFK 295
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+G+ LIATDV ARG+D + + V+N+D P Y+HRI
Sbjct: 296 SGQVRALIATDVAARGLDIQQLEQVVNFDMPYKSEDYVHRI 336
>gi|333926166|ref|YP_004499745.1| DEAD/DEAH box helicase [Serratia sp. AS12]
gi|333931119|ref|YP_004504697.1| DEAD/DEAH box helicase domain-containing protein [Serratia
plymuthica AS9]
gi|386327989|ref|YP_006024159.1| DEAD/DEAH box helicase [Serratia sp. AS13]
gi|333472726|gb|AEF44436.1| DEAD/DEAH box helicase domain protein [Serratia plymuthica AS9]
gi|333490226|gb|AEF49388.1| DEAD/DEAH box helicase domain protein [Serratia sp. AS12]
gi|333960322|gb|AEG27095.1| DEAD/DEAH box helicase domain protein [Serratia sp. AS13]
Length = 454
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQHAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|27366822|ref|NP_762349.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|320158706|ref|YP_004191084.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
gi|27358389|gb|AAO07339.1| ATP-dependent RNA helicase [Vibrio vulnificus CMCP6]
gi|319934018|gb|ADV88881.1| ATP-dependent RNA helicase [Vibrio vulnificus MO6-24/O]
Length = 427
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I + ++ +E+LV DEAD++ ++G N ++ I ++ +NP
Sbjct: 124 GVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVETNPQ 181
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
I+ +FSAT + EL++ I+ R+ V R+NT + ++ +++ +E K L +
Sbjct: 182 IM--MFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAH-VLYPVDQERKTELLSEL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V+
Sbjct: 239 IGRKNWQQVLVFVNYKETANDIVKELKLDGIKANVCHGDKAQSARRRALEEFKEGKVRVM 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D + + V+NYD P Y+HRI
Sbjct: 299 VATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|421782261|ref|ZP_16218719.1| ATP-dependent RNA helicase [Serratia plymuthica A30]
gi|407755624|gb|EKF65749.1| ATP-dependent RNA helicase [Serratia plymuthica A30]
Length = 454
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|270260820|ref|ZP_06189093.1| ATP-dependent RNA helicase [Serratia odorifera 4Rx13]
gi|270044304|gb|EFA17395.1| ATP-dependent RNA helicase [Serratia odorifera 4Rx13]
Length = 452
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|453062686|gb|EMF03676.1| ATP-dependent RNA helicase RhlE [Serratia marcescens VGH107]
Length = 457
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ G+
Sbjct: 238 QMIGEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGRIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 15/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK + +I + + + K C+++++TP RL I+ K +
Sbjct: 319 LAQQIYSEAKKFAKVHGIRISGVYGGMSKFEQFKELKAGCEVVVATPGRLIDMIKMKALS 378
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 379 MHRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPKRVERLAREI 433
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLALRQSFAESLNPPVLIFVQSKER 172
+ D +RV VG +A+E I Q + S+ K LL Q F + + VL+F +K R
Sbjct: 434 LTDPIRVTVGEIGSANEDITQVVTVLPSDAEKTPWLLDRLQPFVDDGD--VLVFASTKLR 491
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
+EL G+++ G + +H D Q R + F+ G +L+ATDV ARG+D K + V
Sbjct: 492 VEELEGKISEAGFKVAALHGDKDQATRMEVLQKFKNGIYHILVATDVAARGLDIKSIKTV 551
Query: 233 INYDFPDSGAAYIHRI 248
+N D +++HRI
Sbjct: 552 VNVDIARDMDSHVHRI 567
>gi|157369574|ref|YP_001477563.1| ATP-dependent RNA helicase RhlE [Serratia proteamaculans 568]
gi|157321338|gb|ABV40435.1| DEAD/DEAH box helicase domain protein [Serratia proteamaculans 568]
Length = 456
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL ++ +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQRAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I+Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 238 QMIGEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|343505788|ref|ZP_08743340.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
gi|342806221|gb|EGU41455.1| putative ATP-dependent RNA helicase [Vibrio ichthyoenteri ATCC
700023]
Length = 426
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNPSI 95
DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 124 GVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKPQT 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 183 M--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F+ GK V+I
Sbjct: 240 GRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQSARRRALDEFKEGKARVMI 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + + V+N+D P Y+HRI
Sbjct: 300 ATDVAARGLDIQNLPHVVNFDMPFLAEDYVHRI 332
>gi|116253340|ref|YP_769178.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257988|emb|CAK09086.1| putative DEAD box ATP-dependent RNA helicase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 576
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 20/236 (8%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 131 NKQQLQLEK------------GTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLD 178
Query: 76 VG--NLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 132
+G + L+ I +V P ++ LFSAT+P + +LA + D V+V V A++
Sbjct: 179 LGFVHDLRKIAKMV-----PKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAAD 233
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHS 192
++Q + F G + K LR+S E+ + ++F+++K A++L L G IH
Sbjct: 234 KVEQYVHFVGGKNDKTELLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHG 293
Query: 193 DLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 294 NKSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 349
>gi|119384480|ref|YP_915536.1| DEAD/DEAH box helicase [Paracoccus denitrificans PD1222]
gi|119374247|gb|ABL69840.1| DEAD/DEAH box helicase domain protein [Paracoccus denitrificans
PD1222]
Length = 479
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
D+LI+TP RL I R IDLS+ YLVLDEAD++ ++G + L+ I ++ P
Sbjct: 190 GVDVLIATPGRLIDLIERGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKML-----PR 244
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P +EELA S ++D +RV V A+E I Q + F ++ K L +
Sbjct: 245 ERQTLLFSATMPKLMEELADSYLNDPLRVAVNPPGQAAEKIDQGVHFV-NQGDKATLLAE 303
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ ++ ++F ++K +++L L G + IH + SQ QRE A+ FRAG+T V
Sbjct: 304 YLSKHVDELAIVFGRTKHGSEKLCKLLDKWGFKVAAIHGNKSQGQRERALASFRAGETKV 363
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V V NYD P+ Y+HRI
Sbjct: 364 LVATDVAARGLDIPQVAHVYNYDLPNVPENYVHRI 398
>gi|149180848|ref|ZP_01859350.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
gi|148851367|gb|EDL65515.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
Length = 496
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ I++ TP R+ I R IDLS + LVLDEAD++ +G LK ++ +++ P
Sbjct: 121 NVGIVVGTPGRILDHIGRGTIDLSELNSLVLDEADQMLHIG-FLKEVEMIIRET--PKTR 177
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG--SEEGKLLALRQ 153
++L FSAT+PD ++ LA+ M + V RK ++S++QK VF +++ L+ + +
Sbjct: 178 QTLLFSATIPDEIKTLAKKHMKSPEYISVERKQGPAKSVEQKAVFVNDRAKQATLIEMIK 237
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ L +IF ++K R +LY LA +G +H DLSQ +RE + FR + +
Sbjct: 238 EYRPYL---AVIFCRTKRRVTKLYEALASEGFMCDELHGDLSQAKREKVMKRFRDAEFQL 294
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATDV ARG+D +G+ V NYD P+ +Y+HRI
Sbjct: 295 LIATDVAARGLDVEGITHVFNYDIPEDADSYVHRI 329
>gi|421590985|ref|ZP_16035909.1| ATP-dependent RNA helicase, partial [Rhizobium sp. Pop5]
gi|403703636|gb|EJZ19816.1| ATP-dependent RNA helicase, partial [Rhizobium sp. Pop5]
Length = 339
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL + R+ I L+ V YLVLDEAD++ ++G + L+ I +V
Sbjct: 125 GTDILVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLDLGFVHDLRKIAKLVPKKRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA + D V+V V A++ ++Q + F G + K LR+S
Sbjct: 183 --TMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGGKNDKTELLRKS 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E+ + ++F+++K A++L L G IH + SQ QRE A+ FR G L
Sbjct: 241 LTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGNKSQGQRERALKAFRDGSIKTL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 301 IATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 334
>gi|37676599|ref|NP_936995.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
gi|37201142|dbj|BAC96965.1| DNA and RNA helicase [Vibrio vulnificus YJ016]
Length = 445
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I + ++ +E+LV DEAD++ ++G N ++ I ++ +NP
Sbjct: 142 GVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVETNPQ 199
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
I+ +FSAT + EL++ I+ R+ V R+NT + ++ +++ +E K L +
Sbjct: 200 IM--MFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAH-VLYPVDQERKTELLSEL 256
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V+
Sbjct: 257 IGRKNWQQVLVFVNYKETANDIVKELKLDGIKANVCHGDKAQSARRRALEEFKEGKVRVM 316
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D + + V+NYD P Y+HRI
Sbjct: 317 VATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 350
>gi|163855229|ref|YP_001629527.1| ATP-dependent RNA helicase [Bordetella petrii DSM 12804]
gi|163258957|emb|CAP41256.1| putative ATP-dependent RNA helicase [Bordetella petrii]
Length = 476
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C+IL++TP RL + +K ++LS+V LVLDEAD++ ++G L +D +V+ P+
Sbjct: 143 GCEILVATPGRLLDHVEQKTVNLSQVGILVLDEADRMLDMG-FLPDLDRIVRLL--PAQR 199
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ L FSAT + + +L R+ ++ V + V +N ++++ Q + + + K A+
Sbjct: 200 QGLLFSATFSNEIRKLGRTYLNQPVEIEVAARNATADTVSQ-IAYQMPSDAKRAAVVHLV 258
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
V++F +K L EL DG+RA IH D SQ R A+D F+AG+ VL+
Sbjct: 259 KSRGLKQVIVFSNTKIGTARLARELERDGVRAESIHGDKSQADRMKALDAFKAGELEVLV 318
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D GV CVINYD P + Y+HRI
Sbjct: 319 ATDVAARGLDVAGVPCVINYDLPHNAEDYVHRI 351
>gi|337293255|emb|CCB91245.1| ATP-dependent RNA helicase rhlE [Waddlia chondrophila 2032/99]
Length = 355
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 6/212 (2%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-ACSNPSIVR 97
+ILI+TP RL I +K I+LS +E LVLDEAD++ ++G I+PV K A + PS +
Sbjct: 126 EILIATPGRLIDYINQKAINLSAIEILVLDEADRMLDMG----FIEPVEKIAAATPSSRQ 181
Query: 98 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+L FSAT+ V L+ ++++ + +++ + T E+I QKL + + K L
Sbjct: 182 TLLFSATMQGSVLNLSNRLLNEPMDIVIHSEKTKHENITQKLHYVDGLQHKNQLLEHILN 241
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ + ++F +K A +L EL G+ AG +H D+SQ QR + R GK VL+A
Sbjct: 242 DDVVKHAIVFTSTKRHASQLVFELHDKGLLAGALHGDMSQRQRSRTIAQLRTGKIKVLVA 301
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + VIN+D P + Y+HRI
Sbjct: 302 TDVAARGIDVQNITHVINFDLPRNVEDYVHRI 333
>gi|168068661|ref|XP_001786160.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662029|gb|EDQ49028.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 377
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 145/262 (55%), Gaps = 19/262 (7%)
Query: 1 LATQTTRECK---KLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K + A+G K I + + + +I+++TP R +++
Sbjct: 15 LAQQIEKEVKAFSRSAEGFKTSIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNS 74
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC--SNPSIVRSL-FSATLPDFVEELARS 114
LSRV Y+VLDEAD++ ++G +P ++ S P ++L FSAT+P+ +E LA+
Sbjct: 75 SLSRVSYVVLDEADRMLDMG-----FEPQIREVMRSLPKKHQTLLFSATMPEEIEALAQE 129
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLAL-----RQSFAESLNPPV-LIF 166
++ VRV VGR ++ + ++ Q L +E LLAL QS + PP+ ++F
Sbjct: 130 YLNKPVRVKVGRVSSPTANVTQNLEKITEKEKIDSLLALLVDEHSQSLDSNQPPPLTIVF 189
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V+ K R E+ L G++A +H SQ++RE A+ DFR G T +L+ATDV +RG+D
Sbjct: 190 VERKARCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVASRGLDV 249
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
GV VIN D P + Y+HRI
Sbjct: 250 TGVAHVINLDLPKTMEDYVHRI 271
>gi|254502530|ref|ZP_05114681.1| DEAD/DEAH box helicase domain protein [Labrenzia alexandrii DFL-11]
gi|222438601|gb|EEE45280.1| DEAD/DEAH box helicase domain protein [Labrenzia alexandrii DFL-11]
Length = 430
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + R +DL YLVLDEAD++ ++G + L+ I +V A +
Sbjct: 125 GTDILVATPGRLLDLVDRNAVDLGSASYLVLDEADQMLDLGFIHALRKIAGLV-AKDRQT 183
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P + ELA+S + D RV V ++ ++QK+ F S+ K L
Sbjct: 184 L---LFSATMPKQINELAQSYLTDPARVEVSPVGRTADKVRQKVHFMDSK-AKTGFLIDV 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + L+F ++K A+ L ++A GI AG IH + SQ QRE A+ + R+G VL
Sbjct: 240 LSDQPDDMSLVFCRTKHGAERLMRKMAQAGIAAGSIHGNKSQNQRERAIKELRSGAIKVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV+ V N++ P+ AY+HRI
Sbjct: 300 VATDVAARGIDIPGVSHVYNFELPEVAEAYVHRI 333
>gi|401837326|gb|EJT41269.1| DBP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 619
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L+ +YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKISLANTKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVG 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANIA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|395782436|ref|ZP_10462833.1| hypothetical protein MCY_01391 [Bartonella rattimassiliensis 15908]
gi|395418690|gb|EJF85008.1| hypothetical protein MCY_01391 [Bartonella rattimassiliensis 15908]
Length = 478
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 17/256 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q + +AKG L+ + R + K D+LI+TP RL+ + K +D
Sbjct: 110 LAVQIDEIIRTVAKGAHLSTCLIFGGVSRLKQIKRMKAGVDVLIATPGRLKDLVHEKCVD 169
Query: 59 LSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+ +L+LDEAD++ ++G + +K I ++ N +LFSAT+P V LA+ ++
Sbjct: 170 LSQTHFLILDEADRMLDMGFIHDVKQISKLL----NQKRQTALFSATMPKEVAVLAKCLL 225
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGK----LLALRQSFAESLNPPVLIFVQSKER 172
+D V++ V + T + I+QKL + E K L +F+ S+ +F ++K
Sbjct: 226 NDPVKIEVAPQGTTAVEIRQKLYCVPTSEKKDILSKLLTNPAFSSSI-----VFTRTKHG 280
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A + LA G IH + SQ R++A+ FR G +L+ATD+ ARG+D G++ V
Sbjct: 281 ADAVTRHLAKIGYLVATIHGNKSQGARQSALKAFREGAVQILVATDIAARGIDIPGISHV 340
Query: 233 INYDFPDSGAAYIHRI 248
INYD PD +Y+HRI
Sbjct: 341 INYDLPDEAESYVHRI 356
>gi|365758019|gb|EHM99884.1| Dbp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 619
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R KI L+ +YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKISLANTKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVG 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANIA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>gi|308272082|emb|CBX28690.1| ATP-dependent RNA helicase rhlE [uncultured Desulfobacterium sp.]
Length = 398
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 24/224 (10%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
K +I+++ P RL + RK IDL+RVE LV+DEAD +F++G +LKH+ P +
Sbjct: 118 KRGAEIVVACPGRLLDHMTRKTIDLTRVEVLVIDEADHMFDMGFLPDIRRILKHL-PAQR 176
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV----FAGSE 144
LFSAT+PD ++ LA+ I+ D + + V SE++ V + ++
Sbjct: 177 QTL-------LFSATMPDEIKSLAKDILKDPITIKV------SETVPADTVSHAHYPVAQ 223
Query: 145 EGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
K L + + VL+F ++K RAK L +LA G R+ + +LSQ +R+ A+D
Sbjct: 224 HLKTAFLLKLLEHINSKSVLVFTRTKHRAKHLDEQLAKAGFRSASLQGNLSQVRRQAALD 283
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G+ VL+ATD+ ARG+D ++ VINYD PD+ AYIHRI
Sbjct: 284 GFRNGRIQVLVATDIAARGIDVCKISHVINYDIPDTPDAYIHRI 327
>gi|395786517|ref|ZP_10466244.1| hypothetical protein ME5_01562 [Bartonella tamiae Th239]
gi|423716590|ref|ZP_17690780.1| hypothetical protein MEG_00320 [Bartonella tamiae Th307]
gi|395422815|gb|EJF89011.1| hypothetical protein ME5_01562 [Bartonella tamiae Th239]
gi|395428664|gb|EJF94739.1| hypothetical protein MEG_00320 [Bartonella tamiae Th307]
Length = 531
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 136/252 (53%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + +KG L+ + R + + + + D+LI+TP RL +R K +D
Sbjct: 163 LAVQIEETVRMASKGAHLATCLILGGVSRLSQIKRMAPGVDVLIATPGRLMDLVREKCVD 222
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G +K + + K +LFSAT+P + LA S+++D
Sbjct: 223 LSQTRFLVLDEADRMLDMG-FIKDVRQIAKLVHAERQT-ALFSATMPKEISSLADSLLND 280
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPPVLIFVQSKERAKEL 176
VR+ V + T + I QKL + E K L L + A S V++F ++K A +
Sbjct: 281 PVRIEVAPQGTTAAEILQKLHPVNNREKKDVLCKLLTNPAFS---SVIVFTRTKHGADAV 337
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G IH + SQ R+ A+ FR G VL+ATD+ ARG+D G++ VINY+
Sbjct: 338 TRHLEKTGYSVAAIHGNKSQNARQRALKSFRDGSVRVLVATDIAARGIDVPGISHVINYE 397
Query: 237 FPDSGAAYIHRI 248
PD +Y+HRI
Sbjct: 398 LPDEAESYVHRI 409
>gi|378755949|gb|EHY65974.1| ATP-dependent RNA helicase DBP2 [Nematocida sp. 1 ERTm2]
Length = 517
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
+ILI+TP RL +K + +SRV +LVLDEAD++ ++G LK I P +NP+
Sbjct: 216 GAEILIATPGRLIDLYEQKAVFMSRVSFLVLDEADRMLDMGFEPQLKKIIPE----TNPN 271
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQK-LVFAGSEEGKLLA-- 150
++SAT P V LAR+ M D +++ +G A+ I QK + E+ K+L+
Sbjct: 272 KQTLMWSATWPKEVRSLARNYMKDYIQIKIGSAELVANVKITQKTFIVDHWEKDKMLSDV 331
Query: 151 -LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
+ E LNP ++IF K R +L ++ G A +H D Q QR+ + DF++G
Sbjct: 332 LADVAGDEKLNPKIIIFCNQKRRCDDLVEKMQEYGWPAEALHGDKPQNQRDRIIQDFKSG 391
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
K +L+ATDV ARG+D K V VINYDFP + YIHRI
Sbjct: 392 KRSILVATDVAARGLDVKDVKAVINYDFPTNCEDYIHRI 430
>gi|343510871|ref|ZP_08748064.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
gi|342800061|gb|EGU35605.1| putative ATP-dependent RNA helicase [Vibrio scophthalmi LMG 19158]
Length = 426
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC-SNPSI 95
DIL++TP RL + K + L +E+LV DEAD++ ++G + I+ +++ + P
Sbjct: 124 GVDILVATPGRLIEHLELKNVSLVNLEFLVFDEADRMLDMG-FISAIEKIMQGVKTKPQT 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V R+NT +E+I +V+ +E K L +
Sbjct: 183 M--LFSATFSAQMNKLAGEILRAPKRIAVARENTTAETIAH-VVYPVEQERKRELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F+ GK V+I
Sbjct: 240 GRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQSARRRALDEFKEGKARVMI 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + + V+N+D P Y+HRI
Sbjct: 300 ATDVAARGLDIQNLPHVVNFDMPFLAEDYVHRI 332
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q ECKK +K + ++ + + + L K C+I+++TP RL I+ K +
Sbjct: 316 LAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALT 375
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+S+ YLVLDEAD++F++G +P +++ P LFSAT+P VE+LAR I
Sbjct: 376 MSKATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 430
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D VRV VG A+E I Q + S+ KL L + E ++ VL+F K
Sbjct: 431 LTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVD 490
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L + +H D Q R + F++G VLIATDV ARG+D K + V+N
Sbjct: 491 EVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVN 550
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 551 FDIAKDMDMHVHRI 564
>gi|384249989|gb|EIE23469.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 573
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 123/217 (56%), Gaps = 10/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL I R ++ LSRV YL LDEAD++ ++G I +V+ P
Sbjct: 220 GCDILVATPGRLSDLIERARVSLSRVTYLALDEADRMLDMG-FEPQIRRIVEQEDMPRTG 278
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGSEEGKLLAL 151
+ LFSAT P ++ LA +H+ + + VGR +++E I Q + V G + LL L
Sbjct: 279 QRQTLLFSATFPKEIQRLAADFLHNYIFLAVGRVGSSTELIVQHIEYVSPGDKRQVLLDL 338
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ E L L+FV++K A L LA + A IH D SQ +RE A+ FR+G+T
Sbjct: 339 INTV-EGL---TLVFVETKRGADALEDFLAGNNFPATSIHGDRSQQEREAALRSFRSGRT 394
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN+D P Y+HRI
Sbjct: 395 PILVATDVAARGLDIPHVTHVINFDLPTDVDDYVHRI 431
>gi|294673582|ref|YP_003574198.1| DEAD/DEAH box helicase [Prevotella ruminicola 23]
gi|294472821|gb|ADE82210.1| ATP-dependent helicase, DEAD/DEAH box family [Prevotella ruminicola
23]
Length = 446
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL ++ +DLSR + VLDEAD++ ++G ++ I +VK S
Sbjct: 124 RMGADVLIATPGRLLSHLKVGNLDLSRCSFFVLDEADRMLDMG-FIEDIMKIVKELP-AS 181
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT+P + ELA ++H+ V + + A E I Q + + E KL ++
Sbjct: 182 CQRIMFSATMPKKIRELAVQLLHNPVEIQIAVSKPA-EKIHQ-MAYVCYEPQKLKIIQDI 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
F + V+IF KER KE+ +L I +HSDLSQ +R+ A+ F+AG+T VL
Sbjct: 240 FKKGDLQRVIIFSGKKERVKEVTRKLKSMHINCDQMHSDLSQAERDEAMYRFKAGQTDVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 300 VATDIVARGIDIDDIRLVINYDVPSDSEDYVHRI 333
>gi|168067875|ref|XP_001785829.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662518|gb|EDQ49361.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 29/267 (10%)
Query: 1 LATQTTRECK---KLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K + A+G K I + + + +I+++TP R +++
Sbjct: 195 LAQQIEKEVKAFSRSAEGFKTSIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNS 254
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL--------FSATLPDFVE 109
LSRV Y+VLDEAD++ ++G +P ++ ++RSL FSAT+P+ +E
Sbjct: 255 SLSRVSYVVLDEADRMLDMG-----FEPQIR-----EVMRSLPKKHQTLLFSATMPEEIE 304
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLAL-----RQSFAESLNPP 162
LA+ ++ VRV VGR ++ + ++ Q L +E LLAL QS + PP
Sbjct: 305 ALAQEYLNKPVRVKVGRVSSPTANVTQNLEKITEKEKIDSLLALLVDEHSQSLDSNQPPP 364
Query: 163 V-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIA 221
+ ++FV+ K R E+ L G++A +H SQ++RE A+ DFR G T +L+ATDV +
Sbjct: 365 LTIVFVERKARCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVAS 424
Query: 222 RGMDFKGVNCVINYDFPDSGAAYIHRI 248
RG+D GV VIN D P + Y+HRI
Sbjct: 425 RGLDVTGVAHVINLDLPKTMEDYVHRI 451
>gi|302308420|ref|NP_985329.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|442570093|sp|Q755N4.2|DBP2_ASHGO RecName: Full=ATP-dependent RNA helicase DBP2
gi|299790624|gb|AAS53153.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|374108557|gb|AEY97463.1| FAFL221Cp [Ashbya gossypii FDAG1]
Length = 557
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K + ++ + + + +S + +ILI+TP RL + K +
Sbjct: 199 LAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTN 258
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 259 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 313
Query: 116 MHDAVRVIVGR-KNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+HD ++V +G + AS +I Q ++V + +L+ + ++ + ++IF +K
Sbjct: 314 LHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIIIFASTKRT 373
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +++FR G++ +++ATDV ARG+D KG+N V
Sbjct: 374 CDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINFV 433
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 434 INYDMPGNIEDYVHRI 449
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q ECKK +K + ++ + + + L K C+I+++TP RL I+ K +
Sbjct: 319 LAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALT 378
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+S+ YLVLDEAD++F++G +P +++ P LFSAT+P VE+LAR I
Sbjct: 379 MSKATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 433
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D VRV VG A+E I Q + S+ KL L + E ++ VL+F K
Sbjct: 434 LTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVD 493
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L + +H D Q R + F++G VLIATDV ARG+D K + V+N
Sbjct: 494 EVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVN 553
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 554 FDIAKDMDMHVHRI 567
>gi|391329499|ref|XP_003739209.1| PREDICTED: ATP-dependent RNA helicase DDX3Y-like [Metaseiulus
occidentalis]
Length = 717
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DL K C +L++TP RL I R K+ L V +LVLDEAD++ ++G I +V
Sbjct: 342 DLDK-GCQLLVATPGRLWDMIERGKVALDLVRFLVLDEADRMLDMG-FEPQIKKIVYDSG 399
Query: 92 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 147
P +FSAT P V+ELA S +HD + + VGR + SE+I QK+V+ ++ +
Sbjct: 400 MPETGERQTLMFSATFPKKVQELATSFLHDYIFLAVGRVGSTSENITQKIVWVEEQDKRE 459
Query: 148 -LLALRQSFAESLNPP----------VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQ 196
LL L ++ P L+FV++K+ A L L +G IH D SQ
Sbjct: 460 FLLDLLEAAGLRCGPDGLAPGSSETLTLVFVETKKGADSLENFLIREGYPVTSIHGDRSQ 519
Query: 197 TQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+RE+A+ FR GKT +++AT V ARG+D V VIN+D P Y+HRI
Sbjct: 520 GEREDALRSFRNGKTPIIVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRI 571
>gi|291000746|ref|XP_002682940.1| predicted protein [Naegleria gruberi]
gi|284096568|gb|EFC50196.1| predicted protein [Naegleria gruberi]
Length = 483
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 13/215 (6%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSNP 93
I+++TP RL + KI L+ +Y+ +DEAD+L ++G + +H++ +N
Sbjct: 194 IVVATPGRLIQMLNENKIQLNDCKYVCMDEADRLIDLGFEEDIKTIFQHLN-----LNNN 248
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
I + FSAT+P+ ++ LA + ++ + V VGR + + Q++ + EE K++ L Q
Sbjct: 249 HIQKVFFSATMPEKIQNLAMNTLNQPIIVNVGRAGAVNLDVIQEVEYV-QEEDKIVYLLQ 307
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ ++ PPVLIF Q+K + L G+ A IHS Q++RE A+D F+ GK V
Sbjct: 308 ALQKT-PPPVLIFSQNKSEVDTICEYLLLKGVEAVSIHSSKDQSEREYAIDSFKQGKKHV 366
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD++++G+DF V VIN+D P Y+HRI
Sbjct: 367 LVATDIVSKGIDFPNVKHVINFDMPREIENYVHRI 401
>gi|320166262|gb|EFW43161.1| ATP dependent RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 633
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C +L++TP RL + R KI L Y+VLDEAD++ ++G I +V+ P++
Sbjct: 307 GCQLLVATPGRLMDLLERGKISLDNCRYVVLDEADRMLDMG-FEPQIREIVEKNDLPAMG 365
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I QKL++ + + + L
Sbjct: 366 ERQMLMFSATFPKEIQALARDFLEDYLFLAVGRVGSTSENITQKLIWVDEHDKRSMLLDL 425
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A L FV++K A L L +G A IH D SQ +RE+A+ FR+G T +
Sbjct: 426 LSAAGPECLTLCFVETKRAADSLEDFLYHEGFPAASIHGDRSQREREDALRTFRSGHTPI 485
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 486 LVATAVAARGLDIPNVKHVINYDLPTEIDEYVHRI 520
>gi|402223504|gb|EJU03568.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 644
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ V YLVLDEAD++ ++G I +V+ P +
Sbjct: 302 GCDLLSATPGRLVDLIERGRISLANVRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPDVN 360
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LA+ + D + + VGR + SE+I Q++ F + + L
Sbjct: 361 HRQTLMFSATFPRDIQMLAKEFLKDYIFLSVGRVGSTSENITQRIEFVEDHDKRSYLLDI 420
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
AE N LIFV++K A L L I A IH D +Q +RE A+ FR+G+T +
Sbjct: 421 LTAEGQNGLTLIFVETKRMADMLSDFLMGSSIPATSIHGDRTQREREQALATFRSGRTPI 480
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++AT V ARG+D V VINYD P Y+HRI
Sbjct: 481 MVATAVAARGLDIPNVMHVINYDLPSDIDDYVHRI 515
>gi|344939864|ref|ZP_08779152.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
gi|344261056|gb|EGW21327.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
Length = 441
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN--PS 94
CDI+++TP RL ++++ I+LS VE LVLDEAD++ ++G L P +K P
Sbjct: 125 GCDIVVATPGRLIDHVQQRNINLSNVEVLVLDEADRMLDMGFL-----PDIKQLMALIPK 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+SL FSAT+P+ ++ LA ++++ V V V ++N +E++ +++ G E + L L
Sbjct: 180 KRQSLLFSATVPNAIKSLAAQLLNNPVEVEVAKQNATAENVAERVYGIGREYKREL-LSY 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ VL+FV++K A L +L DGIR +H D +Q R A++ F+ GK V
Sbjct: 239 LIGSNNWKQVLVFVRTKHGADRLEKQLIEDGIRTAALHGDKTQGARNKALEQFKTGKVSV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+N+D P YIHRI
Sbjct: 299 LVATDIAARGLDIDDLPHVVNFDVPQVPEDYIHRI 333
>gi|16611843|gb|AAL27386.1|AF426171_17 RhlE [Yersinia pestis]
Length = 421
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK
Sbjct: 238 QMIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|405360716|ref|ZP_11025657.1| ATP-dependent RNA helicase RhlE [Chondromyces apiculatus DSM 436]
gi|397090405|gb|EJJ21269.1| ATP-dependent RNA helicase RhlE [Myxococcus sp. (contaminant ex DSM
436)]
Length = 503
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 127/213 (59%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D+L++TP RL + + + L +E VLDEAD++ ++G + + V+KA PS
Sbjct: 124 GVDVLVATPGRLLDLMEQGCVSLRSLEVFVLDEADRMLDMG-FIHDVRRVIKAL--PSKR 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++LF SATLP + +LARSI+ D VRV V ++ +E++ Q++ F E+ + L L
Sbjct: 181 QTLFFSATLPPDIVDLARSILTDPVRVEVTPASSTAETVSQQVYFVEREQKRGL-LTHLL 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E L+F ++K A + +L G+ + IH + SQ RE A+D+FR+G VL+
Sbjct: 240 KEGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ V+NYD P+ Y+HRI
Sbjct: 300 ATDIAARGIDIDGLSYVVNYDLPNVPEQYVHRI 332
>gi|378549072|ref|ZP_09824288.1| hypothetical protein CCH26_03255 [Citricoccus sp. CH26A]
Length = 631
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+++ TP R+ +++ +DLS ++Y+VLDEAD++ +G + +D ++ A +
Sbjct: 157 GAQVVVGTPGRVIDHLQKGSLDLSDLQYMVLDEADEMLRMG-FAEEVDQILSATPDQKQT 215
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+LFSAT+P ++ ++ ++D V V V KNT + +I+Q+ + + + KL A+ +
Sbjct: 216 -ALFSATMPRAIQRISGKYLNDPVEVTVAAKNTTAGNIRQRFLQV-THQWKLEAMTRILE 273
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ V+ FV+++ +EL +L G RA I D++Q QRE V++ RAG+ +L+A
Sbjct: 274 TEEHDGVIAFVRTRNATEELTTKLNARGFRAAAISGDVAQNQREKTVENLRAGRIDILVA 333
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + ++ VINYD P +Y+HRI
Sbjct: 334 TDVAARGLDVERISHVINYDIPHDTESYVHRI 365
>gi|242093508|ref|XP_002437244.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
gi|241915467|gb|EER88611.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
Length = 567
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 145/269 (53%), Gaps = 30/269 (11%)
Query: 1 LATQTTRECKKLAKGNKFQIKL----------MKKELVRSTDLSKFSCDILISTPLRLRL 50
LA Q E +K + FQ L M +L DL + D+L++TP RL
Sbjct: 156 LAAQINEEARKFS----FQTGLRVVVAYGGTPMYNQL---RDLER-GVDLLVATPGRLVD 207
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDF 107
+ R +I L ++YLV+DEAD++ ++G I +V + P S+ ++ LFSAT P
Sbjct: 208 MVERSRISLEGIKYLVMDEADRMLDMG-FEPQIRKIVDMMNMPKKSVRQTMLFSATFPPE 266
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALRQSFAESL------ 159
++ LA +++ + V VGR ++++ I+QKL F G + G L+ L Q + +
Sbjct: 267 IQRLASDFLYNYIFVTVGRVGSSTDLIEQKLEFVNDGEKRGFLIDLLQKQSAGVANSKLQ 326
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
P L+FV++K A L L G A IH D +Q +RE+A+ F++G T +++ATDV
Sbjct: 327 QPLTLVFVETKREADSLRYFLQSKGFPATAIHGDRTQQERESALKSFKSGTTPIMVATDV 386
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+RG+D V VINYD P S Y+HRI
Sbjct: 387 ASRGLDVPNVAHVINYDLPKSIEDYVHRI 415
>gi|260777564|ref|ZP_05886457.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605577|gb|EEX31862.1| ATP-dependent RNA helicase [Vibrio coralliilyticus ATCC BAA-450]
Length = 420
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+LI+TP RL + K I+L + YLVLDEAD++ ++G + I ++K NP
Sbjct: 127 GCDVLIATPGRLLDHLYCKNINLRKTSYLVLDEADRMLDMG-FMPDIQRILKKL-NPERQ 184
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT ++ +A +M++ V V V N+ +E +KQ +V+ ++ K L
Sbjct: 185 TLFFSATFDKRIKTIAHKLMNEPVEVQVTPSNSTAEKVKQ-MVYPVDKKRKAELLAYLIG 243
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K+ + L EL DGI+A I+ D SQ R+ A+DDF++G LIA
Sbjct: 244 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGTIRALIA 303
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + V+N+D P Y+HRI
Sbjct: 304 TDVAARGLDINQLEQVVNFDMPYKAEDYVHRI 335
>gi|374367571|ref|ZP_09625632.1| helicase [Cupriavidus basilensis OR16]
gi|373100874|gb|EHP41934.1| helicase [Cupriavidus basilensis OR16]
Length = 496
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 133/224 (59%), Gaps = 11/224 (4%)
Query: 31 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 90
T+ + +IL++TP RL +++K ++LS+V+ LVLDEAD++ ++G L P ++
Sbjct: 133 TEALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADRMLDMGFL-----PDLQRI 187
Query: 91 SN--PSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGSEE 145
N P+ ++L FSAT ++ LA S +H V + V R N+A+E+++Q + V G ++
Sbjct: 188 INLLPAQRQTLLFSATFSSEIKRLAASYLHQPVTIEVARSNSANENVRQTVFQVEDGHKQ 247
Query: 146 GKLLAL-RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
++ L ++ AE L+ ++FV SK L L +GI A IH D +QT+R +D
Sbjct: 248 AAVVHLLKKRAAEGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLD 307
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+ G L+ATDV ARG+D + CVIN+D P S YIHRI
Sbjct: 308 GFKQGNIDALVATDVAARGLDIPDMPCVINFDLPFSAEDYIHRI 351
>gi|85708371|ref|ZP_01039437.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
gi|85689905|gb|EAQ29908.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
Length = 484
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 128/220 (58%), Gaps = 14/220 (6%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DILI+TP RL I +K +L VE LVLDEAD++ ++G + L+ I +V P
Sbjct: 125 GTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLV-----PK 179
Query: 95 IVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-----L 148
++LF SAT+P ++EL ++ V+V V ++T +E I Q L +E + +
Sbjct: 180 ERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQQDEKQSLLELI 239
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L+ R +LIF ++K A + +L+ GI A IH + SQ QR+ A+D+FR
Sbjct: 240 LSGRHKVPGEFER-ILIFTRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRR 298
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT +L+ATDV ARG+D GV+ V+NY+ P+ Y+HRI
Sbjct: 299 GKTMILVATDVAARGIDIPGVSHVLNYELPNVPEQYVHRI 338
>gi|253990397|ref|YP_003041753.1| putative atp-dependent rna helicase rhle [Photorhabdus asymbiotica]
gi|253781847|emb|CAQ85010.1| putative atp-dependent rna helicase rhle [Photorhabdus asymbiotica]
Length = 444
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 126/216 (58%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PK 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 153
LFSAT D ++ LA ++H+ V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 181 RQNLLFSATFSDEIKNLASKLLHNPVSVEVARRNSASEQIEQFVHFVDKKRKGELLSF-- 238
Query: 154 SFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
S N VL+F ++K A L +L DG+ A IH + SQ R A+ DF+ G+
Sbjct: 239 -LIGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQGARTRALADFKEGRIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPYVVNFELPNVSEDYVHRI 333
>gi|359433282|ref|ZP_09223619.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20652]
gi|357920080|dbj|GAA59868.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20652]
Length = 434
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI AGV H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|332532553|ref|ZP_08408430.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
gi|359440332|ref|ZP_09230253.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
gi|392533028|ref|ZP_10280165.1| ATP-dependent RNA helicase [Pseudoalteromonas arctica A 37-1-2]
gi|332037974|gb|EGI74422.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
gi|358037869|dbj|GAA66502.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
Length = 434
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI AGV H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|414070080|ref|ZP_11406069.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. Bsw20308]
gi|410807592|gb|EKS13569.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. Bsw20308]
Length = 434
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI AGV H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|323497187|ref|ZP_08102207.1| ATP-dependent RNA helicase [Vibrio sinaloensis DSM 21326]
gi|323317762|gb|EGA70753.1| ATP-dependent RNA helicase [Vibrio sinaloensis DSM 21326]
Length = 419
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDILI TP RL + K + L++ EYLVLDEAD++ ++G + I ++K NP
Sbjct: 128 GCDILIVTPGRLIDHMFCKNVSLAKTEYLVLDEADRMLDMG-FMPDIQRILKRF-NPERQ 185
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT ++ +A + D + + V N+ +E++KQ +V+ ++ K L
Sbjct: 186 TLFFSATFDKRIKNIAYKLQKDPIEIQVSPSNSTAETVKQ-MVYPVDKKRKAELLAYLIG 244
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K+ + L EL DGI+A I+ D SQ R+ A+DDF++GK LIA
Sbjct: 245 SRNWQQVLVFTKTKQGSDALAKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIA 304
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + V+N+D P Y+HRI
Sbjct: 305 TDVAARGLDINQLEQVVNFDMPYKAEDYVHRI 336
>gi|108806879|ref|YP_650795.1| helicase, partial [Yersinia pestis Antiqua]
gi|108812966|ref|YP_648733.1| helicase, partial [Yersinia pestis Nepal516]
gi|170025113|ref|YP_001721618.1| helicase domain-containing protein, partial [Yersinia
pseudotuberculosis YPIII]
gi|229894166|ref|ZP_04509352.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|229903400|ref|ZP_04518513.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|384415489|ref|YP_005624851.1| putative ATP-dependent RNA helicase, partial [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|108776614|gb|ABG19133.1| Helicase [Yersinia pestis Nepal516]
gi|108778792|gb|ABG12850.1| helicase [Yersinia pestis Antiqua]
gi|169751647|gb|ACA69165.1| helicase domain protein [Yersinia pseudotuberculosis YPIII]
gi|229679170|gb|EEO75273.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|229704051|gb|EEO91064.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|320015993|gb|ADV99564.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 334
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 6 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 62
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 63 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 121
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 122 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 181
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 182 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 216
>gi|430004424|emb|CCF20219.1| ATP-dependent RNA helicase rhlE [Rhizobium sp.]
Length = 500
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 8/215 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I RK I L+ V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 125 GTDILVATPGRLLDLIARKAIGLTTVRYLVLDEADQMLDLGFIHDLRKISKMV-----PK 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P + ELA + D ++V V A++ ++Q + F G + K L++
Sbjct: 180 KRQTLLFSATMPKAIAELAGDYLTDPIQVSVTPPGKAADKVEQYVHFVGGKNDKTELLKK 239
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + ++F+++K A++L L G IH + SQ QRE A+ FR G+
Sbjct: 240 TLTANAGGRAIVFMRTKHTAEKLMKHLDQVGYSVASIHGNKSQGQRERALKGFRDGEIQT 299
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATDV ARG+D V V NYD P+ AYIHRI
Sbjct: 300 LIATDVAARGIDIPDVTHVFNYDLPEVPDAYIHRI 334
>gi|302307229|ref|NP_983823.2| ADL273Cp [Ashbya gossypii ATCC 10895]
gi|442570182|sp|Q75B50.2|DED1_ASHGO RecName: Full=ATP-dependent RNA helicase DED1
gi|299788899|gb|AAS51647.2| ADL273Cp [Ashbya gossypii ATCC 10895]
gi|374107035|gb|AEY95943.1| FADL273Cp [Ashbya gossypii FDAG1]
Length = 623
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 5/214 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C P++
Sbjct: 279 CDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPTVEN 337
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT P ++ LA + D + + VGR + SE+I QK++ + K L
Sbjct: 338 RQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHV-EDIDKRSVLLDL 396
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A S L+FV++K A L L + A IH D +Q +RE A+ FR G+ VL
Sbjct: 397 LAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGRANVL 456
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 457 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 490
>gi|297620744|ref|YP_003708881.1| ATP-dependent RNA helicase DBP2 [Waddlia chondrophila WSU 86-1044]
gi|297376045|gb|ADI37875.1| ATP-dependent RNA helicase DBP2 [Waddlia chondrophila WSU 86-1044]
Length = 439
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 6/212 (2%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK-ACSNPSIVR 97
+ILI+TP RL I +K I+LS +E LVLDEAD++ ++G I+PV K A + PS +
Sbjct: 126 EILIATPGRLIDYINQKAINLSAIEILVLDEADRMLDMG----FIEPVEKIAAATPSSRQ 181
Query: 98 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+L FSAT+ V L+ ++++ + +++ + T E+I QKL + + K L
Sbjct: 182 TLLFSATMQGSVLNLSNRLLNEPMDIVIHSEKTKHENITQKLHYVDGLQHKNQLLEHILN 241
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ + ++F +K A +L EL G+ AG +H D+SQ QR + R GK VL+A
Sbjct: 242 DDVVKHAIVFTSTKRHASQLVFELHDKGLLAGALHGDMSQRQRSRTIAQLRTGKIKVLVA 301
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + VIN+D P + Y+HRI
Sbjct: 302 TDVAARGIDVQNITHVINFDLPRNVEDYVHRI 333
>gi|51595558|ref|YP_069749.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis IP
32953]
gi|108807091|ref|YP_651007.1| ATP-dependent RNA helicase RhlE [Yersinia pestis Antiqua]
gi|108812974|ref|YP_648741.1| ATP-dependent RNA helicase RhlE [Yersinia pestis Nepal516]
gi|153950333|ref|YP_001401773.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis IP
31758]
gi|166211637|ref|ZP_02237672.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400295|ref|ZP_02305808.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167423922|ref|ZP_02315675.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|170025120|ref|YP_001721625.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis YPIII]
gi|186894614|ref|YP_001871726.1| ATP-dependent RNA helicase RhlE [Yersinia pseudotuberculosis PB1/+]
gi|229894068|ref|ZP_04509254.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|229903411|ref|ZP_04518524.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|294503186|ref|YP_003567248.1| DEAD/DEAH box helicase [Yersinia pestis Z176003]
gi|384121627|ref|YP_005504247.1| DEAD/DEAH box helicase [Yersinia pestis D106004]
gi|51588840|emb|CAH20454.1| putative ATP-dependent RNA helicase rhlE [Yersinia
pseudotuberculosis IP 32953]
gi|108776622|gb|ABG19141.1| DEAD/DEAH box helicase [Yersinia pestis Nepal516]
gi|108779004|gb|ABG13062.1| DEAD/DEAH box helicase [Yersinia pestis Antiqua]
gi|152961828|gb|ABS49289.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia
pseudotuberculosis IP 31758]
gi|166207408|gb|EDR51888.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167050244|gb|EDR61652.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056771|gb|EDR66534.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751654|gb|ACA69172.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
YPIII]
gi|186697640|gb|ACC88269.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
PB1/+]
gi|229679181|gb|EEO75284.1| putative ATP-dependent RNA helicase [Yersinia pestis Nepal516]
gi|229703953|gb|EEO90966.1| putative ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
gi|262361223|gb|ACY57944.1| DEAD/DEAH box helicase [Yersinia pestis D106004]
gi|294353645|gb|ADE63986.1| DEAD/DEAH box helicase [Yersinia pestis Z176003]
Length = 451
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|372489782|ref|YP_005029347.1| DNA/RNA helicase [Dechlorosoma suillum PS]
gi|359356335|gb|AEV27506.1| DNA/RNA helicase, superfamily II [Dechlorosoma suillum PS]
Length = 473
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 5/216 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL++ P RL I ++ +DLS +E LVLDEAD++ ++G ++ I ++ A P+
Sbjct: 127 KRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMG-FIRDIRKIL-ALLPPN 184
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ELARS +HD + V R+NT E++ QK++ E+ K + L
Sbjct: 185 GKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKDVLLH 244
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
N VLIF ++K A L L +GIR+ +H + +Q R A+ +F+ GK
Sbjct: 245 LFENRGWNQ-VLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEGKLV 303
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 304 ALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRI 339
>gi|359454797|ref|ZP_09244066.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20495]
gi|358048174|dbj|GAA80315.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20495]
Length = 434
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C+
Sbjct: 121 KEGVDIVVATPGRLFDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEDMQNVIKSCAEER 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ A V V + N+ + +++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQAEIVRVDQTNSTASTVEH-VVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI AGV H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVKELNLDGIPAGVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|45440809|ref|NP_992348.1| ATP-dependent RNA helicase RhlE [Yersinia pestis biovar Microtus
str. 91001]
gi|45435667|gb|AAS61225.1| Superfamily II DNA and RNA helicases [Yersinia pestis biovar
Microtus str. 91001]
Length = 470
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 142 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 198
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 199 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 257
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 258 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 317
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 318 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 352
>gi|238759754|ref|ZP_04620912.1| ATP-dependent RNA helicase rhlE [Yersinia aldovae ATCC 35236]
gi|238701986|gb|EEP94545.1| ATP-dependent RNA helicase rhlE [Yersinia aldovae ATCC 35236]
Length = 452
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|54302687|ref|YP_132680.1| ATP-dependent RNA helicase [Photobacterium profundum SS9]
gi|46916111|emb|CAG22880.1| putative ATP-dependent RNA helicase [Photobacterium profundum SS9]
Length = 431
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + K + L+ +E+LV DEAD++ ++G + + + +NP I+
Sbjct: 124 GVDILVATPGRLIEHVDLKNVSLANIEFLVFDEADRMLDMGFITDMRKVMGEVNTNPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT + LA I+ R++V R+NT ++++ +V+ +E K L +
Sbjct: 184 --MFSATSSKQMNALASDILRKPKRIMVDRENTTADTVSH-VVYPVDQERKRELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F+ GK V++A
Sbjct: 241 KKNWKQVLVFVNYKETANELVKELKKDGIKAVLCHGDKAQSARRRALDEFKEGKARVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T+V ARG+D + + V+N+D P Y+HRI
Sbjct: 301 TEVAARGLDIQALPHVVNFDMPFLAEDYVHRI 332
>gi|238763827|ref|ZP_04624785.1| ATP-dependent RNA helicase rhlE [Yersinia kristensenii ATCC 33638]
gi|238697957|gb|EEP90716.1| ATP-dependent RNA helicase rhlE [Yersinia kristensenii ATCC 33638]
Length = 452
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|118579192|ref|YP_900442.1| DEAD/DEAH box helicase [Pelobacter propionicus DSM 2379]
gi|118501902|gb|ABK98384.1| DEAD/DEAH box helicase domain protein [Pelobacter propionicus DSM
2379]
Length = 447
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL------LKHIDPVVKAC 90
DI+++ P RL I + IDLSR+E LVLDEAD++F++G L LKH+ P +
Sbjct: 120 GVDIVVACPGRLLDHINQGTIDLSRIEVLVLDEADQMFDMGFLPDIRRVLKHL-PAQRQT 178
Query: 91 SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
LFSAT+PD + LA I+ + V G +TA ++ S+ K
Sbjct: 179 L-------LFSATMPDDIRRLASDILRQPITVQAG--STAPPVTVSHALYPVSQHLKTPL 229
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + + VLIF ++K RAK L +L G RA + +LSQ +R+ A+D FR G
Sbjct: 230 LLELLRHTDTESVLIFARTKHRAKRLGEQLEKAGYRATSLQGNLSQNRRQAALDGFRDGT 289
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+++ATD+ ARG+D ++ V+NYD PD+ AYIHRI
Sbjct: 290 FQIMVATDIAARGIDVSQISHVVNYDIPDTAEAYIHRI 327
>gi|222144592|gb|ACM46113.1| DDX3/PL10 DEAD-box RNA helicase [Schmidtea polychroa]
Length = 458
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 128/223 (57%), Gaps = 11/223 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
DLS+ C++L++TP RL + R +I L + YLVLDEAD++ ++G I +V+ +
Sbjct: 82 DLSQ-GCNMLVATPGRLSDMLERCRIGLDCIRYLVLDEADRMLDMG-FEPQIRKIVEQTN 139
Query: 92 NPSIVRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 147
P + +FSAT P ++ LA + D + + VG+ + S++I Q++V+ E +
Sbjct: 140 MPPPGQRQTLMFSATFPKEIQMLASDFLQDYLFLRVGKVGSTSQNITQRIVYVDESEKRD 199
Query: 148 --LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
L L +ESL +L+FV++K A L G L +G R IH D SQ+ RE A+
Sbjct: 200 HLLDILADIDSESL---ILVFVETKRGADSLEGFLHGEGFRVASIHGDRSQSDRELALQC 256
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G+T +L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 257 FRDGRTPILVATAVAARGLDIPNVKFVINYDLPTDIEEYVHRI 299
>gi|395331683|gb|EJF64063.1| ATP-dependent RNA helicase ded-1 [Dichomitus squalens LYAD-421 SS1]
Length = 649
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P +
Sbjct: 321 GCDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVH 379
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR M D V + VGR + SE+I Q++ + + + LL +
Sbjct: 380 ERQTLMFSATFPRDIQMLARDFMKDYVFLSVGRVGSTSENITQRIEYVEDNDKRSVLLDV 439
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
Q+ L L+FV++K A L L + + A IH D +Q +RE A+ FR G+T
Sbjct: 440 LQAHGTGL---TLVFVETKRMADMLSDFLLGNNLPATSIHGDRTQRERETALQTFRTGRT 496
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 497 PILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 533
>gi|123443103|ref|YP_001007077.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257770|ref|ZP_14760522.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122090064|emb|CAL12927.1| putative ATP-dependent RNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404514847|gb|EKA28630.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 451
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|238788773|ref|ZP_04632564.1| ATP-dependent RNA helicase rhlE [Yersinia frederiksenii ATCC 33641]
gi|238723078|gb|EEQ14727.1| ATP-dependent RNA helicase rhlE [Yersinia frederiksenii ATCC 33641]
Length = 451
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|254572872|ref|XP_002493545.1| ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase [Komagataella
pastoris GS115]
gi|238033344|emb|CAY71366.1| ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase [Komagataella
pastoris GS115]
gi|328354630|emb|CCA41027.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 606
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 12/221 (5%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
CD+L++TP RL + R KI L++++YL+LDEAD++ ++G I +V+ C PS+
Sbjct: 271 LGCDLLVATPGRLSDLLERGKISLAKIKYLILDEADRMLDMG-FEPQIRHIVQGCDMPSV 329
Query: 96 VRS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK----- 147
+FSAT P ++ LA+ + D + + VGR + SE+I Q+++ +E K
Sbjct: 330 NERHTLMFSATFPRDIQLLAKDFLKDYIFLSVGRVGSTSENITQRVLSVEDDEKKSVLLD 389
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
+L+ E L LIFV++K A L L A IH D +Q +RE+A+ F+
Sbjct: 390 ILSSSDDIKEGL---TLIFVETKRMADTLSHFLVTRNFPATSIHGDRTQQEREHALHLFK 446
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+G +L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 447 SGAAPILVATAVAARGLDIPNVTHVVNYDLPADIDDYVHRI 487
>gi|241958200|ref|XP_002421819.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645164|emb|CAX39763.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 557
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 134/256 (52%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q EC K K ++ + + + + + +I I+TP RL + K +
Sbjct: 202 LAVQIQTECAKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTN 261
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 262 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 316
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP---PVLIFVQSKER 172
++D ++V +G A+ +LV E K L + +LN +L+F +K
Sbjct: 317 LNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNERENKILVFASTKRT 376
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q++R+ +D+FR GKT +++ATDV ARG+D KG+ V
Sbjct: 377 CDEITTYLRSDGWPALAIHGDKDQSERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHV 436
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 437 INYDMPGNIEDYVHRI 452
>gi|332161012|ref|YP_004297589.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386309242|ref|YP_006005298.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240812|ref|ZP_12867348.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550318|ref|ZP_20506362.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica IP 10393]
gi|318604884|emb|CBY26382.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665242|gb|ADZ41886.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|351779815|gb|EHB21912.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789453|emb|CCO69402.1| ATP-dependent RNA helicase RhlE [Yersinia enterocolitica IP 10393]
Length = 451
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|344301404|gb|EGW31716.1| hypothetical protein SPAPADRAFT_51698 [Spathaspora passalidarum
NRRL Y-27907]
Length = 644
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R +I LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 298 GCDLLVATPGRLKDLLERGRISLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVN 356
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LA + D V + VGR + SE+I QK+++ +E K +L L
Sbjct: 357 NRQTLMFSATFPRDIQLLAHDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDL 416
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L ++F ++K A L L G A IH D +Q +RE A+ F+ G
Sbjct: 417 LSAGDAGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRTQYEREKALAAFKNGAA 473
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 474 PILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRI 510
>gi|84515959|ref|ZP_01003320.1| DEAD/DEAH box helicase [Loktanella vestfoldensis SKA53]
gi|84510401|gb|EAQ06857.1| DEAD/DEAH box helicase [Loktanella vestfoldensis SKA53]
Length = 447
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q KG+ ++ L+ + T D+L++TP RL + R+ +
Sbjct: 87 LAKQIADNLTAYTKGSHLKVALVVGGAGITAQTKRLAGGVDLLVATPGRLIDLLDRRAVR 146
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
L YLVLDEAD++ ++G + L+ I P++ +FSAT+P + ELA + +
Sbjct: 147 LDETVYLVLDEADQMLDMGFIHALRRIAPLLAKDRQ----TMMFSATMPKLMSELADAFL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
DAVRV V A + I Q + F ++ K L + + L+F ++K ++L
Sbjct: 203 TDAVRVQVNPPGQAVKKIAQSVHFV-AQAAKTDLLVDLLDKHRDELALVFGRTKHGCEKL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y L G A IH + SQ QRE A++ F+AGK VL+ATDV ARG+D GV V NYD
Sbjct: 262 YKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAARGIDIPGVRHVYNYD 321
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 322 LPNVAENYVHRI 333
>gi|154418331|ref|XP_001582184.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916417|gb|EAY21198.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 640
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 142/261 (54%), Gaps = 26/261 (9%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKE---LVRSTDLS------KFSCDILISTPLRLRLA 51
LA QT EC+K+ LM K+ LV D+ K +++I+TP R
Sbjct: 185 LAYQTHIECQKI-------FSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDL 237
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP-VVKACSNPSIVRS--LFSATLPDFV 108
+ ++ +V YLV+DEAD++F++G +P V++ R +FSAT P V
Sbjct: 238 LSSSAFNIKKVSYLVIDEADRMFDLG-----FEPQVIRIAERMRKDRQTLMFSATFPHTV 292
Query: 109 EELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFV 167
E +AR ++ +++ ++VG +N + +I Q ++ +E+ K +L + + + L+F
Sbjct: 293 ERIARKLLQNSIEIVVGLRNVVTPNINQSILVT-NEDNKFNSLLKILGDYTTQGQALVFT 351
Query: 168 QSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFK 227
+++RA++L+G+L G G++H + R + + DFR G+ VL+ T V ARG+D
Sbjct: 352 NTQDRAEDLFGKLNKSGYSVGLLHGSMDSPDRNSILHDFREGRFSVLVLTSVGARGIDIA 411
Query: 228 GVNCVINYDFPDSGAAYIHRI 248
+ CVINYD PD A Y+HR+
Sbjct: 412 SIICVINYDAPDHEADYVHRV 432
>gi|390433214|ref|ZP_10221752.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans IG1]
Length = 456
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|372277732|ref|ZP_09513768.1| ATP-dependent RNA helicase RhlE [Pantoea sp. SL1_M5]
Length = 457
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|339444298|ref|YP_004710302.1| hypothetical protein EGYY_07040 [Eggerthella sp. YY7918]
gi|338904050|dbj|BAK43901.1| hypothetical protein EGYY_07040 [Eggerthella sp. YY7918]
Length = 510
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL+ ++R +DLS V+ LVLDEAD++ ++G L + +V A P
Sbjct: 121 RGGTDVLIATPGRLKDLMKRGVVDLSSVQTLVLDEADRMLDMG-FLPDVTTIVDAT--PE 177
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLV-FAGSEEGKLL--A 150
++L FSAT+ +++ S++ + V + R +E++ Q ++ A ++ +LL
Sbjct: 178 CRQTLLFSATIDHSIQKNLGSLLTNPAIVEIARNGETAETVAQYVMPIANRKKPELLHAV 237
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + AE V++F ++K R +E EL G IHSD SQ QR+ A+D+FR GK
Sbjct: 238 LDEKGAER----VIVFARTKNRTEECADELRRSGYSVESIHSDKSQGQRKRALDNFRRGK 293
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T +L+ATDV+ARG+D VN VIN+D PD Y+HRI
Sbjct: 294 TSILVATDVLARGIDVPDVNHVINFDLPDMPEDYVHRI 331
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 9/214 (4%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNPS 94
D+L++TP RL + ++ IDLS V+Y VLDEAD++ ++G ++ K I + K N
Sbjct: 125 VDVLVATPGRLLDLVNQRHIDLSNVKYFVLDEADRMLDMGMIHDVKKIISKLPKERQN-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P V +L SI+ + V+V V ++ +E I Q + F + K L +
Sbjct: 183 ---LLFSATMPKEVTKLVNSILKNPVKVEVQPVSSTAEIISQGVYFVPKKNKKSLLIHLL 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
ES+ V++F ++K A ++ +L GI++ IH + SQ QR+ A+++F+ G VL
Sbjct: 240 KDESIKS-VIVFSRTKHGANKIAKDLEKAGIQSAAIHGNKSQNQRQLALNNFKEGNIRVL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D ++ VINYD PD Y+HRI
Sbjct: 299 VATDIAARGIDIDELSHVINYDLPDVAETYVHRI 332
>gi|86358753|ref|YP_470645.1| ATP-dependent RNA helicase [Rhizobium etli CFN 42]
gi|86282855|gb|ABC91918.1| ATP-dependent RNA helicase protein [Rhizobium etli CFN 42]
Length = 560
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 128/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL + R+ I L+ V YLVLDEAD++ +
Sbjct: 137 NKQQLQLEK------------GTDILVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLD 184
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V+V V A++
Sbjct: 185 LGFVHDLRKIAKLVPKKRQ----TMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADK 240
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F G + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 241 VEQYVHFVGGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGN 300
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 301 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 355
>gi|381150962|ref|ZP_09862831.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
gi|380882934|gb|EIC28811.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
Length = 425
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDI+++TP RL + +K I+LS +E LVLDEAD++ ++G L I ++ P
Sbjct: 125 GCDIVVATPGRLLDHLLQKNIELSHLEILVLDEADRMLDMG-FLPDIRKIIGHL--PRQK 181
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+SL FSAT P+ + LA+ ++H+ V V NT +++IK+ L + ++E K L
Sbjct: 182 QSLLFSATFPEEIRGLAKQLLHEPAEVSVAPHNTTADNIKE-LCYGIAKERKRGLLSYLI 240
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ VL+FV++K A L +L DGIR +H D SQ R A+D F+ G+ L+
Sbjct: 241 GSNNWKQVLVFVRTKHGADRLEKQLVKDGIRTAALHGDKSQGARTRALDYFKTGQVAALV 300
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D + VIN+D P YIHRI
Sbjct: 301 ATDIAARGLDIDELPHVINFDLPQVPEDYIHRI 333
>gi|386002133|ref|YP_005920432.1| ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210189|gb|AET64809.1| ATP-dependent RNA helicase, putative [Methanosaeta harundinacea
6Ac]
Length = 418
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 126/216 (58%), Gaps = 11/216 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ L++TP RL + + IDL +E+ VLDEAD++ ++G K + +V A P
Sbjct: 124 GVEALVATPGRLLDLMEQGHIDLKGIEFFVLDEADRMLDMG-FAKDVHRIVSAL--PKKR 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA---LR 152
SLF +AT+ + ELA ++ D VRV V + T ESI+Q++ F +E L L+
Sbjct: 181 HSLFFAATMSREIGELAGRLLKDPVRVEVAPQATPVESIEQRIFFVDQKEKNPLLIGLLQ 240
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q F + VL+F ++K RA + L GIRA IH D +Q QR A+ F+AG+
Sbjct: 241 QKFLKR----VLVFTRTKRRADRVAKVLTRSGIRADAIHGDRTQNQRLAALRGFKAGRLQ 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + ++ VINYD P+ +Y+HRI
Sbjct: 297 VLVATDIAARGIDVEDISHVINYDLPNEPESYVHRI 332
>gi|409041060|gb|EKM50546.1| hypothetical protein PHACADRAFT_263884 [Phanerochaete carnosa
HHB-10118-sp]
Length = 647
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ + YLVLDEAD++ ++G I +V+ P
Sbjct: 310 GCDLLSATPGRLVDLIERGRISLANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGTQ 368
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR M D V + VGR + SE+I QK+ + + + + L
Sbjct: 369 DRQTLMFSATFPRDIQVLARDFMKDYVFLSVGRVGSTSENITQKIEYVEDPDKRSVLLDI 428
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A+ L+FV++K A L L + I A IH D SQ +RE A+ FR G+T V
Sbjct: 429 LSAQDEGGLTLVFVETKRMADMLSDFLYTNRIAATSIHGDRSQRERETALQTFRTGRTPV 488
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 489 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 523
>gi|329954895|ref|ZP_08295912.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
gi|328526999|gb|EGF54010.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
Length = 499
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 188 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKYL--PKE 244
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA+SI++D V + A + ++ + E KL +R
Sbjct: 245 RQTIMFSATMPAKIQQLAQSILNDPAEVKLAVSKPAEKIVQA--AYVCYENQKLGIIRSL 302
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 303 FAEQTPERVIIFASSKLKVKEVTKALKQMKLNVGEMHSDLEQAQREEVMYEFKAGRVNIL 362
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 363 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 396
>gi|297568967|ref|YP_003690311.1| DEAD/DEAH box helicase domain protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924882|gb|ADH85692.1| DEAD/DEAH box helicase domain protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 442
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + +K IDLS+VE LVLDEAD++ ++G L+ I ++ I
Sbjct: 123 GVDILVATPGRLLDHVSQKTIDLSKVEMLVLDEADRMLDMG-FLRDIRKILALLP---IQ 178
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R LFSAT D ++ LA ++ + V R+NTA+E + Q + ++G AL
Sbjct: 179 RQNLLFSATFSDEIKRLADGLLKSPTLIEVARRNTAAEQVDQAIYRI--DKGLKRALLSH 236
Query: 155 FAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VL+F ++K A L G+LA DGI + IH + SQ R A+ DF+ GK V
Sbjct: 237 LISGQNWQQVLVFTRTKHGANRLAGQLAKDGISSTAIHGNKSQGARTRALADFKQGKVRV 296
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 297 LVATDIAARGLDIEQLPHVVNYELPNVPEDYVHRI 331
>gi|159478699|ref|XP_001697438.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274317|gb|EDP00100.1| predicted protein [Chlamydomonas reinhardtii]
Length = 515
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 16/223 (7%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 93
+++++TP R +++ +L R+ Y+VLDEAD++ ++G +P +K N P
Sbjct: 238 GVEVVVATPGRFIDHLQQGNTNLGRISYVVLDEADRMLDMG-----FEPQIKEVMNNLPP 292
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-----KL 148
LFSAT+P +EELAR+ ++ V V +G +T + ++ Q+L A + L
Sbjct: 293 KHQTLLFSATMPKEIEELARAYLNKPVTVKIGAVSTPTANVSQRLEHAPEPQKLDILVAL 352
Query: 149 LALRQSFAESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
++ + + PP+ ++FV+ K R E+ L DGI A +H L+Q +RE A+ D
Sbjct: 353 ISAEVAAEAAGGPPMPLTIVFVERKTRCDEVAAALREDGINANALHGGLNQNEREAALRD 412
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F G VL+ATDV +RG+D KG+ VIN D P + Y+HRI
Sbjct: 413 FAKGDIKVLVATDVASRGLDIKGIGHVINMDLPKTFEDYVHRI 455
>gi|340029625|ref|ZP_08665688.1| DEAD/DEAH box helicase domain-containing protein [Paracoccus sp.
TRP]
Length = 481
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
D+LI+TP RL I R IDLS+ YLVLDEAD++ ++G + L+ I ++ P
Sbjct: 190 GVDVLIATPGRLIDLIDRGAIDLSQTRYLVLDEADQMLDIGFIHALRRIAKML-----PR 244
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P +EELA S + D VRV V A+E I+Q + F ++ K L +
Sbjct: 245 ERQTLLFSATMPKLMEELADSYLTDPVRVAVNPPGQAAEKIEQGVHFV-NQGDKATLLAE 303
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ + ++F ++K +++L L G + IH + SQ QRE A+ FRAG T V
Sbjct: 304 YLSKHRDELAIVFGRTKHGSEKLSKLLEKWGFKVAAIHGNKSQGQRERALASFRAGDTKV 363
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V V NYD P+ Y+HRI
Sbjct: 364 LVATDVAARGLDIPEVAHVYNYDLPNVPENYVHRI 398
>gi|334366430|ref|ZP_08515362.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
gi|313157396|gb|EFR56819.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
Length = 473
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 13/222 (5%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D + D+L++TP RL I + + LS + + VLDEAD++ ++G + +K I P++
Sbjct: 119 DALQRGVDLLVATPGRLLDLIGQGYVSLSDIRFFVLDEADRMLDMGFIHDIKRILPLL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK- 147
P ++LF SAT+P + LA S++HD V V V + E+I Q ++FA E K
Sbjct: 177 ---PKERQTLFFSATMPSDIVTLANSMLHDPVHVTVTPPASVVETISQSVMFAEKAEKKD 233
Query: 148 -LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDF 206
L++L + +E VL+F ++K A + L GI IH D SQ RE A++DF
Sbjct: 234 LLISLLRERSEGS---VLVFSRTKHGADRIARILTKAGIEGRAIHGDKSQGARERAMNDF 290
Query: 207 RAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
RAG+ VLIATD+ ARG+D + VINYD P+ Y+HRI
Sbjct: 291 RAGRCRVLIATDIAARGIDISELPLVINYDLPEVAETYVHRI 332
>gi|315499118|ref|YP_004087922.1| dead/deah box helicase domain-containing protein [Asticcacaulis
excentricus CB 48]
gi|315417130|gb|ADU13771.1| DEAD/DEAH box helicase domain protein [Asticcacaulis excentricus CB
48]
Length = 605
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LATQ K +KG QI + + DIL++TP RL I +K ID
Sbjct: 87 LATQIADSFKAYSKGLGLQIATIFGGVKYGPQYKALQGGIDILVATPGRLIDHIEQKTID 146
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSIVRSLF-SATLPDFVEELARSIM 116
L VE+LVLDEAD++ ++G I P+ + S P+ ++LF SAT+P + LA ++
Sbjct: 147 LKAVEHLVLDEADQMLDMG----FIKPIRQVASRLPAQRQNLFFSATMPKEIAGLANELL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +V + + T +E + Q+++F + + L L + +A+ LIF ++K A +
Sbjct: 203 TNPKKVEITPEATTAERVTQQVIFIEQQRKRAL-LSELYADEKLARTLIFTRTKRGADRV 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G+ A IH D +Q+QRE A+ F+AG+ L+ATD+ ARG+D V VINY+
Sbjct: 262 AAYLQAGGVEAAAIHGDKNQSQRERALQAFKAGRVRALVATDIAARGIDVDNVTHVINYE 321
Query: 237 FPDSGAAYIHRI 248
P AY+HRI
Sbjct: 322 LPFVAEAYVHRI 333
>gi|354603350|ref|ZP_09021349.1| hypothetical protein HMPREF9450_00264 [Alistipes indistinctus YIT
12060]
gi|353349227|gb|EHB93493.1| hypothetical protein HMPREF9450_00264 [Alistipes indistinctus YIT
12060]
Length = 489
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 120/216 (55%), Gaps = 12/216 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DI+++TP RL I IDLS V Y VLDEAD++ ++G D ++K
Sbjct: 125 GSDIVVATPGRLLAHIANSGIDLSHVSYFVLDEADRMLDMG----FFDDIMKIIKELPTE 180
Query: 97 RS--LFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R +FSATLP + ++A+ I+ + V + V + N E+I+Q ++ E K+ +R
Sbjct: 181 RQTIMFSATLPPKIRQMAKQILRNPAEVNIAVSKPN---EAIQQG-IYVCYENQKMEIVR 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
F E +IF SK++ KEL L + A +HSDL Q QRE + DF+ GK
Sbjct: 237 ALFGEPTGTKTIIFSSSKQKVKELAYTLKRMKLNAAAMHSDLEQEQREEVMLDFKNGKID 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATD++ARG+D + + V+NYD P YIHRI
Sbjct: 297 LLVATDIVARGIDIEDIGTVVNYDVPHDPEDYIHRI 332
>gi|302854279|ref|XP_002958649.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
gi|300256038|gb|EFJ40315.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
Length = 582
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 20/225 (8%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 93
+++++TP R +++ +LSRV Y+VLDEAD++ ++G +P +K N P
Sbjct: 260 GVEVVVATPGRFIDLLQQSYTNLSRVSYVVLDEADRMLDMG-----FEPQIKEVMNNLPP 314
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK----LL 149
LFSAT+P +EELAR+ ++ V V +G +T + ++ Q+L A EG+ L+
Sbjct: 315 RHQTLLFSATMPKEIEELARAYLNKPVTVKIGAVSTPTANVAQRLEHA--PEGQKLDILV 372
Query: 150 ALRQS--FAE-SLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAV 203
AL S AE S PP+ ++FV+ K R E+ L DGI A +H L Q +RE A+
Sbjct: 373 ALISSEVAAEASGGPPMPLTIVFVERKNRCDEVAAALQEDGIPANALHGGLGQFEREAAL 432
Query: 204 DDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DF G VL+ATD+ +RG+D KG+ VIN D P + Y+HRI
Sbjct: 433 RDFAKGHIKVLVATDLASRGLDVKGIGHVINMDLPKTFEDYVHRI 477
>gi|255691171|ref|ZP_05414846.1| ATP-dependent RNA helicase RhlE [Bacteroides finegoldii DSM 17565]
gi|260623074|gb|EEX45945.1| DEAD/DEAH box helicase [Bacteroides finegoldii DSM 17565]
Length = 374
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ + DIL++TP RL I + I L+ +EY VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLRKGIDILVATPGRLLDLINQGHIHLTNIEYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIIALTKSLLKNPVKIYITPKSSTVDSIKQIIYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L ++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILQKAEDRSVLIFSRTKHNADKIVRILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTKVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|300779124|ref|ZP_07088982.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504634|gb|EFK35774.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 373
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 133/214 (62%), Gaps = 9/214 (4%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DIL++TP RL + ++ IDLS++E VLDEAD++ ++G + + V+K P +
Sbjct: 124 VDILVATPGRLLDLVNQRHIDLSKIEIFVLDEADRMLDMG-FINDVKKVLKLI--PQKRQ 180
Query: 98 SLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLALRQS 154
+LF SAT+P + + A +I+++ V+V V ++ ++++KQ + F + G L+ L Q+
Sbjct: 181 TLFFSATMPSGIRKFAETILNNPVKVTVTPVSSTAQTVKQSVYFVEKRDKTGLLIDLLQN 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E++ L+F ++K A +L +L GI A IH + SQT R+NA+DDF++ K VL
Sbjct: 241 --ENMRRS-LVFTRTKYIANKLVQQLEGVGIFAAAIHGNKSQTARQNALDDFKSSKIKVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 IATDIAARGIDIDDLPHVVNYELPNIPETYVHRI 331
>gi|390945687|ref|YP_006409447.1| DNA/RNA helicase [Alistipes finegoldii DSM 17242]
gi|390422256|gb|AFL76762.1| DNA/RNA helicase, superfamily II [Alistipes finegoldii DSM 17242]
Length = 473
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 13/215 (6%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPSIV 96
D+L++TP RL I + + LS + + VLDEAD++ ++G + +K I P++ P
Sbjct: 126 DLLVATPGRLLDLIGQGYVSLSDIRFFVLDEADRMLDMGFIHDIKRILPLL-----PKER 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQ 153
++LF SAT+P + LA S++HD V V V + E+I Q ++FA E K L++L +
Sbjct: 181 QTLFFSATMPSDIVTLANSMLHDPVHVTVTPPASVVETISQSVMFAEKAEKKDLLISLLR 240
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+E VL+F ++K A + L GI IH D SQ RE A++DFRAG+ V
Sbjct: 241 ERSEGS---VLVFSRTKHGADRIARILTKAGIEGRAIHGDKSQGARERAMNDFRAGRCRV 297
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATD+ ARG+D + VINYD P+ Y+HRI
Sbjct: 298 LIATDIAARGIDISELPLVINYDLPEVAETYVHRI 332
>gi|319899115|ref|YP_004159208.1| ATP-dependent RNA helicase [Bartonella clarridgeiae 73]
gi|319403079|emb|CBI76634.1| ATP-dependent RNA helicase [Bartonella clarridgeiae 73]
Length = 416
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 135/253 (53%), Gaps = 11/253 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q +AKG L+ + R + + + DILI+TP RL IR K ID
Sbjct: 92 LAVQIEEAISAVAKGTHLSTCLILGGMSRLIQIKRMAKGVDILIATPGRLMDLIRSKYID 151
Query: 59 LSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
LS+ + VLDEAD++ ++G ++ + + + K C +LFSAT+P V LA ++
Sbjct: 152 LSQSRFFVLDEADRMLDMGFISDVRQIANFLHKKCQT-----ALFSATMPKEVNVLADNL 206
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ +++ V + T + I Q L + E K + L + V++F+++K A
Sbjct: 207 LKKPIKIEVVPQGTTAVEITQVLYCVSTSEKKSV-LSKLLTNPALASVIVFIRTKHGADS 265
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
+ L G IH + SQ R+ A+ DFR G +L+ATD++ARG+D G++ VINY
Sbjct: 266 VARSLKKTGYSVATIHGNKSQNARQCALKDFREGLVRILVATDIVARGIDIPGISHVINY 325
Query: 236 DFPDSGAAYIHRI 248
D PD+ +Y+HRI
Sbjct: 326 DLPDNAESYVHRI 338
>gi|19113315|ref|NP_596523.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe 972h-]
gi|10720389|sp|P24782.2|DBP2_SCHPO RecName: Full=ATP-dependent RNA helicase dbp2; AltName:
Full=p68-like protein
gi|173419|gb|AAA35319.1| p68 RNA helicase [Schizosaccharomyces pombe]
gi|3810840|emb|CAA21801.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe]
Length = 550
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K K ++ + + + R + +I I+TP RL + K +
Sbjct: 207 LAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTN 266
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P +FSAT P V+ LAR
Sbjct: 267 LRRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDY 321
Query: 116 MHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
++D ++V VG + AS +IKQ ++V + +L + + + VLIF +K
Sbjct: 322 LNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRV 381
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A ++ L DG A IH D +Q +R+ +++FR GK+ +++ATDV +RG+D KG+ V
Sbjct: 382 ADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHV 441
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HRI
Sbjct: 442 FNYDFPGNTEDYVHRI 457
>gi|440229962|ref|YP_007343755.1| DNA/RNA helicase, superfamily II [Serratia marcescens FGI94]
gi|440051667|gb|AGB81570.1| DNA/RNA helicase, superfamily II [Serratia marcescens FGI94]
Length = 455
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DILI+TP RL + +DLS VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILIATPGRLLDLEHQNAVDLSNVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ V V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALAGKLLHNPASVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ G+
Sbjct: 238 QMIGEGDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGRIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|440759128|ref|ZP_20938281.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
gi|436427144|gb|ELP24828.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
Length = 457
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|428151523|ref|ZP_18999239.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|427538506|emb|CCM95377.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 459
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|421909360|ref|ZP_16339178.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410116748|emb|CCM81803.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 463
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|408370410|ref|ZP_11168187.1| DEAD/DEAH box helicase [Galbibacter sp. ck-I2-15]
gi|407744168|gb|EKF55738.1| DEAD/DEAH box helicase [Galbibacter sp. ck-I2-15]
Length = 575
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 131/229 (57%), Gaps = 19/229 (8%)
Query: 27 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLL 80
++ + K I+++TP R++ I RK +++S+++Y VLDEAD++ +G ++L
Sbjct: 112 IIEQANQVKRGSQIVVATPGRMKDMISRKMVNISKIQYCVLDEADEMLNMGFYEDIKDIL 171
Query: 81 KHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF 140
H P K+ LFSAT+P V +A+ M+ + VG KN+ASE+++ +
Sbjct: 172 SHT-PKEKSTW-------LFSATMPKEVSNIAKKFMNQPHEITVGTKNSASENVQHEYYV 223
Query: 141 AGSEEGKLLALRQSFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQ 198
G + + LAL++ A++ NP + +IF ++K +++ +L DG AG +H DLSQ Q
Sbjct: 224 VGGRD-RYLALKR-LADT-NPDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQ 280
Query: 199 RENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
R+ + FR + +L+ATDV ARG+D + VINY PD Y HR
Sbjct: 281 RDMVMKSFRNKQIQMLVATDVAARGIDVDDITHVINYQLPDEIETYTHR 329
>gi|393236170|gb|EJD43720.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 650
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L +Q E +K A + + L+ ++ + L + CD+L +TP RL I R +I
Sbjct: 276 LVSQIHDEARKFAYRSWVKPALVYGGADINQQLRLIERGCDLLSATPGRLVDLIERGRIS 335
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
L+ + YLVLDEAD++ ++G I +V+ P + +FSAT P ++ LA+
Sbjct: 336 LANIRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQERQTLMFSATFPRDIQILAKDF 394
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ + + + VGR + SE+I QK+ + E + + L AE N LIFV++K A
Sbjct: 395 LKEYIFLSVGRVGSTSENITQKIEYVEDNEKRSILLDILHAEGKNGLTLIFVETKRMADI 454
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L L + A IH D SQ +RE+A+ FR G+T +++AT V ARG+D V VINY
Sbjct: 455 LSDFLYANQFPATSIHGDRSQRERESALATFRQGRTPIMVATAVAARGLDIPNVTHVINY 514
Query: 236 DFPDSGAAYIHRI 248
D P Y+HRI
Sbjct: 515 DLPSDIDDYVHRI 527
>gi|304395765|ref|ZP_07377648.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
gi|304357059|gb|EFM21423.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
Length = 457
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|84684138|ref|ZP_01012040.1| hypothetical protein 1099457000262_RB2654_16856 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667891|gb|EAQ14359.1| hypothetical protein RB2654_16856 [Rhodobacterales bacterium
HTCC2654]
Length = 439
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + RK + L +LVLDEAD++ ++G + L+ I P +
Sbjct: 125 GTDILVATPGRLIDLMDRKAVRLDTATFLVLDEADQMLDMGFIHALRRIAPELGTPRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P +EEL+R+ + D V+V V A++ I Q + +A + K+ L+
Sbjct: 183 --TMLFSATMPKQMEELSRAYLTDPVKVQVAAPGKAADKITQGVHWAQDKGDKIDILKAY 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + L+F ++K A+ L +L G A IH + SQ QR+ A+ FR GK VL
Sbjct: 241 LSDEPDGLSLVFARTKHGAERLMKQLCASGFDAVSIHGNKSQGQRDRALAAFRDGKARVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV+ V N+D P+ Y+HRI
Sbjct: 301 VATDVAARGIDIPGVSHVFNFDLPNVAENYVHRI 334
>gi|351713448|gb|EHB16367.1| ATP-dependent RNA helicase DDX3Y [Heterocephalus glaber]
Length = 652
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSN 92
+ C +L++TP RL + R KI L +YLVLDEAD++ ++G ++HI V K
Sbjct: 314 EHGCHLLVATPGRLEDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRHI--VEKYTMP 371
Query: 93 PSIVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
P VR +FSAT P ++ LAR + + + + VGR + SE+I Q++V+ E +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQRVVWVEELEKRSFL 431
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L L+FV++K+ A L L +G IH D SQ RE A+ FR+GK
Sbjct: 432 LDLLGPTGKGSLTLVFVETKKGADSLEDFLHHEGYACTSIHGDRSQRDREEALQQFRSGK 491
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T +L+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 492 TPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 529
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL ++ K +
Sbjct: 230 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK 289
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 290 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 344
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 345 LTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVD 404
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 405 EIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVN 464
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 465 FDIAKEMDMHIHRI 478
>gi|294678037|ref|YP_003578652.1| ATP-dependent RNA helicase RhlE [Rhodobacter capsulatus SB 1003]
gi|294476857|gb|ADE86245.1| ATP-dependent RNA helicase RhlE [Rhodobacter capsulatus SB 1003]
Length = 448
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 139/255 (54%), Gaps = 15/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LATQ A+G +I+ + V++ LSK CD+LI+TP RL I R+ +
Sbjct: 87 LATQIHDNLAAYAEGAPVRIQRVVGGASLNVQAEKLSK-GCDVLIATPGRLIDLIERRAL 145
Query: 58 DLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
LS +YLVLDEAD++ ++G + L+ I ++ A LFSAT+P +EELA S
Sbjct: 146 VLSETKYLVLDEADQMLDIGFIHALRRIAKLIPAERQ----TLLFSATMPKLMEELAASY 201
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVL--IFVQSKERA 173
+ D +RV V A+E I Q + F + +G+ AL + S +P L +F ++K +
Sbjct: 202 LSDPIRVEVATPGKAAEKIDQGVHF--TTQGEKAALLAEYI-SRHPGELAVVFNRTKHGS 258
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+L L G IH + SQ QRE A+ FRA + VL+ATDV ARG+D V V
Sbjct: 259 DKLTKLLEKWGFSVTAIHGNKSQGQRERALSAFRASEVQVLVATDVAARGLDIPQVAHVY 318
Query: 234 NYDFPDSGAAYIHRI 248
NYD P+ Y+HRI
Sbjct: 319 NYDLPNVPENYVHRI 333
>gi|328544967|ref|YP_004305076.1| ATP-dependent RNA helicase [Polymorphum gilvum SL003B-26A1]
gi|326414709|gb|ADZ71772.1| ATP-dependent RNA helicase protein [Polymorphum gilvum SL003B-26A1]
Length = 503
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 140/253 (55%), Gaps = 11/253 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
L TQ + KG+ Q+ ++ + + + + DIL++TP RL + R +
Sbjct: 105 LVTQIAQNLVAFVKGSPLQVAVVMGGVSIGGQIKRLARGTDILVATPGRLLDLVDRNALR 164
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSI 115
L V YLVLDEAD++ ++G + L+ I +V P ++L FSAT+P +E+LAR+
Sbjct: 165 LDEVGYLVLDEADQMLDLGFIHALRKIAALV-----PKKRQTLLFSATMPKQIEDLARAY 219
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ D VRV V ++ + Q + F ++ K L +E L+F ++K A +
Sbjct: 220 LKDPVRVEVAPAGRTADKVDQCVHFV-AQADKTDLLISCLSERAQDLSLVFARTKHGADK 278
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
+ +L G++A IH + SQ QR+ A+ + + G+T +L+ATDV ARG+D GV+ V N+
Sbjct: 279 VVRKLVAAGLKANAIHGNKSQNQRDRAIKELKTGETRILVATDVAARGIDIPGVSHVYNF 338
Query: 236 DFPDSGAAYIHRI 248
D PD +Y+HRI
Sbjct: 339 DLPDVPESYVHRI 351
>gi|237755972|ref|ZP_04584559.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691876|gb|EEP60897.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 405
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 135/254 (53%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILI-STPLRLRLAIRRKKI 57
LA Q +E K+L K K + K + + K D+++ TP R+R + R +
Sbjct: 86 LAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINFLKKGSDVVVVGTPGRVRDLLERGVL 145
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSI 115
+L V+ VLDEAD++ E+G ID + + S R LFSAT+P + ELA
Sbjct: 146 NLDNVKMFVLDEADRMLEMG----FIDDIEEIMSYLPEDRQILLFSATMPKEILELAEEF 201
Query: 116 MHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+++ I + + + E IKQ +++ + K L + +++ V+IF Q+K A
Sbjct: 202 LNENYETIKVKPDEVTVEKIKQ-IIYRVNPRDKFKKLTEVLSQNEAEKVIIFTQTKIEAD 260
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
EL L +G A IH D SQ +RE + +FR GK +L+ATDV ARG+D KGV+ VIN
Sbjct: 261 ELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDIKGVDLVIN 320
Query: 235 YDFPDSGAAYIHRI 248
Y P +YIHRI
Sbjct: 321 YGLPRDAESYIHRI 334
>gi|423685883|ref|ZP_17660691.1| DNA and RNA helicase [Vibrio fischeri SR5]
gi|371495184|gb|EHN70781.1| DNA and RNA helicase [Vibrio fischeri SR5]
Length = 431
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 7/213 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 95
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P I
Sbjct: 125 VDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQI 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 183 M--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A E+ EL DGI+A + H D +Q+ R A+++F+ GK V++
Sbjct: 240 GRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + VINYD P Y+HRI
Sbjct: 300 ATDVAARGLDIADLPHVINYDMPFLAEDYVHRI 332
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK Q+ + + + K C+I+++TP RL ++ K +
Sbjct: 299 LAHQIYLEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKALR 358
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 359 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 413
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 414 LTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKMPGMIDDGDVLVFATKKARVD 473
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G + +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 474 EVENQLNQHGFKVAALHGDKDQASRMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVN 533
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 534 FDIAKEMDMHIHRI 547
>gi|421918244|ref|ZP_16347776.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410119452|emb|CCM90401.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 418
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|197334932|ref|YP_002155940.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
gi|197316422|gb|ACH65869.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
Length = 431
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 7/213 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 95
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P I
Sbjct: 125 VDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQI 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 183 M--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A E+ EL DGI+A + H D +Q+ R A+++F+ GK V++
Sbjct: 240 GRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + VINYD P Y+HRI
Sbjct: 300 ATDVAARGLDIADLPHVINYDMPFLAEDYVHRI 332
>gi|449052728|ref|ZP_21732359.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae hvKP1]
gi|448875863|gb|EMB10868.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae hvKP1]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+++TP RL ++ K +
Sbjct: 311 LAHQIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALT 370
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P V++ P LFSAT+P VE+LAR I
Sbjct: 371 MMRATYLVLDEADRMFDLG-----FEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 425
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + E ++ L+F K
Sbjct: 426 LSDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVD 485
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +LA G + +H D Q R + + F++G VLIATDV ARG+D K + V+N
Sbjct: 486 EIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVN 545
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 546 FDIAKDMDMHVHRI 559
>gi|152969387|ref|YP_001334496.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|365139153|ref|ZP_09345663.1| ATP-dependent RNA helicase rhlE [Klebsiella sp. 4_1_44FAA]
gi|378977819|ref|YP_005225960.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386033962|ref|YP_005953875.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae KCTC 2242]
gi|419974710|ref|ZP_14490127.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419977806|ref|ZP_14493104.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987058|ref|ZP_14502183.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991473|ref|ZP_14506438.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997938|ref|ZP_14512730.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003806|ref|ZP_14518449.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420006904|ref|ZP_14521400.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420012540|ref|ZP_14526853.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020791|ref|ZP_14534976.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024066|ref|ZP_14538080.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031055|ref|ZP_14544878.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038792|ref|ZP_14552435.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420041896|ref|ZP_14555391.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420046990|ref|ZP_14560308.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056136|ref|ZP_14569296.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061472|ref|ZP_14574460.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064158|ref|ZP_14576968.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420069526|ref|ZP_14582181.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078157|ref|ZP_14590617.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084520|ref|ZP_14596776.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424829756|ref|ZP_18254484.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|424934331|ref|ZP_18352703.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425077527|ref|ZP_18480630.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088160|ref|ZP_18491253.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090700|ref|ZP_18493785.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428940153|ref|ZP_19013245.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae VA360]
gi|150954236|gb|ABR76266.1| putative ATP-dependent RNA helicase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339761090|gb|AEJ97310.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae KCTC 2242]
gi|363654512|gb|EHL93410.1| ATP-dependent RNA helicase rhlE [Klebsiella sp. 4_1_44FAA]
gi|364517230|gb|AEW60358.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397345127|gb|EJJ38254.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345977|gb|EJJ39096.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397353346|gb|EJJ46420.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397361555|gb|EJJ54216.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363734|gb|EJJ56371.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397368249|gb|EJJ60856.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397381416|gb|EJJ73587.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397385751|gb|EJJ77846.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387462|gb|EJJ79487.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399449|gb|EJJ91101.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397400795|gb|EJJ92433.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403895|gb|EJJ95434.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397417455|gb|EJK08620.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397417749|gb|EJK08912.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397420966|gb|EJK12007.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397430627|gb|EJK21316.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397433767|gb|EJK24410.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397442774|gb|EJK33116.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397445167|gb|EJK35418.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450132|gb|EJK40246.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405593236|gb|EKB66688.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405602292|gb|EKB75434.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405613678|gb|EKB86407.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407808518|gb|EKF79769.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414707181|emb|CCN28885.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426302754|gb|EKV64945.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae VA360]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|59711751|ref|YP_204527.1| DNA and RNA helicase [Vibrio fischeri ES114]
gi|59479852|gb|AAW85639.1| DNA and RNA helicase [Vibrio fischeri ES114]
Length = 431
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 7/213 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 95
DIL++TP RL+ I + + ++ +E+LV DEAD++ ++G N +++I +++ ++P I
Sbjct: 125 VDILVATPGRLQEHIEEENVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNTSPQI 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V +NT + +I +V+ EE K L +
Sbjct: 183 M--LFSATSSAQMNKLASDILRKPKRISVDPENTTASTIAH-VVYPVDEERKTELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A E+ EL DGI+A + H D +Q+ R A+++F+ GK V++
Sbjct: 240 GRKNWQQVLVFVNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + VINYD P Y+HRI
Sbjct: 300 ATDVAARGLDIADLPHVINYDMPFLAEDYVHRI 332
>gi|329891295|ref|ZP_08269638.1| putative ATP-dependent RNA helicase rhlE [Brevundimonas diminuta
ATCC 11568]
gi|328846596|gb|EGF96160.1| putative ATP-dependent RNA helicase rhlE [Brevundimonas diminuta
ATCC 11568]
Length = 589
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 128/213 (60%), Gaps = 9/213 (4%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSIVR 97
D+L++ P RL I++K +DLS E VLDEAD++ ++G I P+ + S P+ +
Sbjct: 129 DVLVAAPGRLLDHIQQKTLDLSTCEIFVLDEADQMLDLG----FIKPIRQIVSRIPAKRQ 184
Query: 98 SLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-RQSF 155
+LF SAT+P + +LA ++ D V+V V + T E IKQ +++ E+GK AL + F
Sbjct: 185 NLFFSATMPSEIGKLAGELLKDPVKVQVTPQATTVERIKQSVIWV--EQGKKRALLTELF 242
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
++ L+F ++K A ++ L G+ AG IH + SQ QRE A++ F+ GK VL+
Sbjct: 243 SDPAYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERALEAFKNGKLRVLV 302
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D V V+N++ P AY+HRI
Sbjct: 303 ATDIAARGIDVDKVTHVVNFELPYVPEAYVHRI 335
>gi|295104477|emb|CBL02021.1| Superfamily II DNA and RNA helicases [Faecalibacterium prausnitzii
SL3/3]
Length = 641
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DILI+ P RL I + IDLS +E VLDEAD++ ++G + + V+ P+
Sbjct: 121 KKGVDILIACPGRLNDLIGQGFIDLSALEIFVLDEADRMLDMG-FVHDVKKVIAKL--PA 177
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P +E+LA I+HD V V ++ + I+Q L + E+G L
Sbjct: 178 QRQNLMFSATMPAEIEQLAAGILHDPAFVKVDPVSSTVDRIQQSLYYV--EKGNKKLLLP 235
Query: 154 SFAESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
++L PPV L+F ++K A ++ +L GI A IH + SQT R A++DF++GK
Sbjct: 236 WLIKNLQPPVVNALVFSRTKHGADKIAKDLTKQGIPAAAIHGNKSQTARVTALEDFKSGK 295
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T VL+ATD+ ARG+D ++ V NYD P+ Y+HRI
Sbjct: 296 TRVLVATDIAARGIDISELSHVFNYDLPEVPETYVHRI 333
>gi|238893853|ref|YP_002918587.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402781658|ref|YP_006637204.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238546169|dbj|BAH62520.1| putative ATP-dependent RNA helicase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402542534|gb|AFQ66683.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|365990195|ref|XP_003671927.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
gi|343770701|emb|CCD26684.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
Length = 523
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL I+ ++LS V+YLVLDEAD++ E G + I +++ S +
Sbjct: 234 VVVATPGRLLDLIQEGSVNLSAVKYLVLDEADRMLEKG-FEEDIKNIIRETSPKGRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA S M++ V+V +G ++ TA++ I Q +++ ++ KLL L + +
Sbjct: 293 FTATWPKEVRELASSFMNEPVKVSIGNRDELTANKRITQIVEVIDPQRKDRKLLDLLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ N VLIF K+ A + L ++G IH DLSQ QR A+ +F+AGKT +
Sbjct: 353 HSGPTKNDKVLIFALYKKEAARVERNLKYNGYEVAAIHGDLSQEQRTRALGEFKAGKTNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|339998715|ref|YP_004729598.1| ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC 12419]
gi|339512076|emb|CCC29797.1| putative ATP-dependent RNA helicase rhlE [Salmonella bongori NCTC
12419]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFI--HDIRRVLAKLPPK 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|39996017|ref|NP_951968.1| ATP-dependent RNA helicase RhlE [Geobacter sulfurreducens PCA]
gi|39982782|gb|AAR34241.1| ATP-dependent RNA helicase RhlE [Geobacter sulfurreducens PCA]
Length = 447
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 125/226 (55%), Gaps = 28/226 (12%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL------LKHIDPVVK 88
K +++++ P RL I + IDLSR+E LVLDEAD++F++G L LKH+ P +
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQ 177
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASE------SIKQKLVFAG 142
LFSAT+P + LA+ I+ D V V VG A ++Q L
Sbjct: 178 TL--------LFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVTVAHALYPVEQHL---- 225
Query: 143 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENA 202
L LR + ES VLIF ++K RAK L +L G RA + +LSQ +R+ A
Sbjct: 226 KTPLLLELLRHTDTES----VLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAA 281
Query: 203 VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+D FR G +L+ATD+ ARG+D V+ VINYD PD+ AYIHRI
Sbjct: 282 LDGFRDGTFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRI 327
>gi|384919775|ref|ZP_10019812.1| DEAD/DEAH box helicase-like protein [Citreicella sp. 357]
gi|384466377|gb|EIE50885.1| DEAD/DEAH box helicase-like protein [Citreicella sp. 357]
Length = 436
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 133/252 (52%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L Q ++L G+K ++ + + + R DIL++TP RL + R +D
Sbjct: 87 LVNQIADSLRQLTDGSKLRVATVVGGQSINRQISFLSRGTDILVATPGRLIDLMDRGAVD 146
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS V LVLDEAD++ ++G + L+ I P + LFSAT+P +EEL+ + +
Sbjct: 147 LSTVRQLVLDEADQMLDLGFIHALRRIAPKLGTPRQ----TMLFSATMPKQMEELSSAYL 202
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
+ +V V A++ + Q + F + K LR+ + ++ L+F ++K A+ L
Sbjct: 203 SNPRKVQVSPPGKAADKVTQSVHFVDKND-KPAKLREILRKDMDALTLVFSRTKHGAERL 261
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L DG A IH + SQ QR+ A+ FR G VL+ATDV ARG+D GV V+N+D
Sbjct: 262 MKGLVADGFNAASIHGNKSQGQRDRAIKAFRDGTITVLVATDVAARGIDIPGVAYVVNFD 321
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 322 LPEVPDNYVHRI 333
>gi|163800373|ref|ZP_02194274.1| hypothetical protein 1103602000595_AND4_06819 [Vibrio sp. AND4]
gi|159175816|gb|EDP60610.1| hypothetical protein AND4_06819 [Vibrio sp. AND4]
Length = 430
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DIL++TP RL I + + ++ +++LV DEAD++ ++G + ++ +NP I+
Sbjct: 125 VDILVATPGRLEEHIEQGNVSVANIDFLVFDEADRILDMGFIHAVRKIMLDVDTNPQIM- 183
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
+FSAT + LA+ I+H R+ V R NT +++I +++ +E K L +
Sbjct: 184 -MFSATTSSQLNLLAKDILHKPKRIEVERANTTAQTIAH-VLYPVDQERKTELLSELIGR 241
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V++AT
Sbjct: 242 KNWRQVLVFVNYKETANDVVKELKLDGIKAVVCHGDRAQSARRRALEEFKTGKARVMVAT 301
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+D + + V+NYD P Y+HRI
Sbjct: 302 DVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|332285242|ref|YP_004417153.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330429195|gb|AEC20529.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 455
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
D + C+ILI+TP RL + +K ++LS+V LVLDEAD++ ++G L +D +V+
Sbjct: 133 DALRRGCEILIATPGRLLDHVEQKNVNLSQVGILVLDEADRMLDMG-FLPDLDRIVRLL- 190
Query: 92 NPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ-KLVFAGSEE-GKL 148
P+ + L FSAT + + +L RS + + + V +N ++++ Q AGS++ +
Sbjct: 191 -PAKRQGLLFSATFSNEIRKLGRSYLSNPAEIEVAARNATADTVTQIAYPLAGSDKRAAV 249
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+ L +S N V++F +K L EL DG++A IH D SQ R A+D F+A
Sbjct: 250 VHLVKS--RGFNQ-VIVFSNTKIGTSRLARELVRDGVKAESIHGDKSQLDRMKALDAFKA 306
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ VL+ATDV ARG+D GV CVINYD P + Y+HRI
Sbjct: 307 GELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 346
>gi|160942681|ref|ZP_02089924.1| hypothetical protein FAEPRAM212_00153 [Faecalibacterium prausnitzii
M21/2]
gi|158446036|gb|EDP23039.1| DEAD/DEAH box helicase [Faecalibacterium prausnitzii M21/2]
Length = 641
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DILI+ P RL I + IDLS +E VLDEAD++ ++G + + V+ P+
Sbjct: 121 KKGVDILIACPGRLNDLIGQGFIDLSALEIFVLDEADRMLDMG-FVHDVKKVIAKL--PA 177
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+P +E+LA I+HD V V ++ + I+Q L + E+G L
Sbjct: 178 QRQNLMFSATMPAEIEQLAAGILHDPAFVKVDPVSSTVDRIQQSLYYV--EKGNKKLLLP 235
Query: 154 SFAESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
++L PPV L+F ++K A ++ +L GI A IH + SQT R A++DF++GK
Sbjct: 236 WLIKNLQPPVVNALVFSRTKHGADKIAKDLTKQGIPAAAIHGNKSQTARVTALEDFKSGK 295
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T VL+ATD+ ARG+D ++ V NYD P+ Y+HRI
Sbjct: 296 TRVLVATDIAARGIDISELSHVFNYDLPEVPETYVHRI 333
>gi|392978221|ref|YP_006476809.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324154|gb|AFM59107.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 450
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|269104692|ref|ZP_06157388.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161332|gb|EEZ39829.1| ATP-dependent RNA helicase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 430
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL + + + LS +E+LV DEAD++ ++G + + S P I+
Sbjct: 124 GCDILVATPGRLLEHLELQNVLLSNIEFLVFDEADRMLDMGFISAIRTILSNVNSTPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT + +LA +++ R+ V +N+ +E++ +V+ EE K L +
Sbjct: 184 --LFSATFSSQMNKLAGELLNKPKRISVTPENSTAETVAH-VVYPVDEERKREMLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ VL+FV KE A +L EL DGI+A + H D +Q R A+ +F+ GK V++A
Sbjct: 241 KKNWQQVLVFVNYKETANQLVEELELDGIKAVLCHGDKAQGARRRALKEFKEGKARVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T+V ARG+D +G+ V+NYD P Y+HRI
Sbjct: 301 TEVAARGLDIQGLPHVVNYDMPFLAEDYVHRI 332
>gi|425080638|ref|ZP_18483735.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428933930|ref|ZP_19007468.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae JHCK1]
gi|405605773|gb|EKB78777.1| ATP-dependent RNA helicase rhlE [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|426304047|gb|EKV66201.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae JHCK1]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|66357412|ref|XP_625884.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226846|gb|EAK87812.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|323510023|dbj|BAJ77905.1| cgd4_3000 [Cryptosporidium parvum]
Length = 702
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 141/255 (55%), Gaps = 10/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIK-LMKKELVRST--DLSKFSCDILISTPLRLRLAIRRKKI 57
LA QT E +K G + L VRS DL + S DI+++TP RLR I R K+
Sbjct: 296 LAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGS-DIIVATPGRLRDLIDRGKV 354
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS----LFSATLPDFVEELAR 113
+L +++L+LDEAD++ ++G I +V+ P + +FSAT P +++LA+
Sbjct: 355 NLKLIKFLILDEADRMLDMG-FAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAK 413
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+H+ + + VGR S SI Q++V+A E+ K L + E ++FV+ K RA
Sbjct: 414 DFLHNYIFLTVGRVGATSGSIVQRVVYA-EEDHKPRLLVKLLLEQGEGLTVVFVEMKRRA 472
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++ L A IH D SQ +RE+A+ FR+G+ +L+ATDV ARG+D + VI
Sbjct: 473 DQIEDFLIDQNFPAVSIHGDRSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVI 532
Query: 234 NYDFPDSGAAYIHRI 248
N D P + Y+HRI
Sbjct: 533 NLDMPCNIDDYVHRI 547
>gi|381166173|ref|ZP_09875390.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Phaeospirillum molischianum DSM 120]
gi|380684620|emb|CCG40202.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Phaeospirillum molischianum DSM 120]
Length = 432
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + I L VE LVLDEAD++ ++G ++ I +V A S
Sbjct: 125 GVDILVATPGRLLDLMSQDAIRLDSVEALVLDEADRMLDMG-FIQPIRKIVAAMPK-SRQ 182
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+PD + LA S++H VRV V ++ +E I QK++F E + L L + A
Sbjct: 183 TVLFSATMPDSIVGLAESVLHRPVRVEVAPVSSTAEKIDQKVMFVDRENKRTL-LTEILA 241
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
L+F ++K A + L GI A IH + SQ R+ A+ DFR GK L+A
Sbjct: 242 GKDVGRALVFTRTKHGANRVAEMLDKAGISADAIHGNKSQGARQKALADFRDGKIKALVA 301
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D G+ V+NY+ P+ +Y+HRI
Sbjct: 302 TDIAARGIDVDGITHVLNYELPNEPESYVHRI 333
>gi|258648442|ref|ZP_05735911.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
gi|260851194|gb|EEX71063.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
Length = 484
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 8/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+I+TP RL + DLSR +LVLDEAD++ ++G D ++K +
Sbjct: 129 KRGADIVIATPGRLLTHLDLGTFDLSRTTHLVLDEADRMLDMG----FSDDILKIVKHLP 184
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT+P + ELA IMH+ V + A E+I+Q L F E K ++
Sbjct: 185 EQRQTILFSATMPAKIRELAHKIMHNPEEVSIAISKPA-ENIRQSL-FICKENDKTAIIK 242
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
FA+ V+IF SK++ KEL L G +HSDL Q QR+ + F+AG+
Sbjct: 243 HLFADQKPERVIIFCGSKQKVKELNITLKRKGYNVEAMHSDLEQKQRDEVMLGFKAGRID 302
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 303 ILVATDIVARGIDIDDITLVINYDVPRDAEDYVHRI 338
>gi|224284362|gb|ACN39916.1| unknown [Picea sitchensis]
Length = 593
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 135/254 (53%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +E K +K + + + + +I+I+TP RL + + +
Sbjct: 255 LAVQIQQESVKFGTSSKIKSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEARHTN 314
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ P +SAT P VE LAR
Sbjct: 315 LRRVTYLVLDEADRMLDMG-----FEPQIRKIITQIRPDRQTLYWSATWPREVENLARQF 369
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
+H+ +VI+G + + ++V SE K L + E ++ +LIF+++K+
Sbjct: 370 LHNPYKVIIGSADLKANHAISQIVEVVSEYEKYPRLIKLLEEIMDGSRILIFMETKKGCD 429
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
++ +L DG A IH D SQ +R+ + +F+AGK+ ++ ATDV ARG+D K + CVIN
Sbjct: 430 QVTKQLRMDGWPALSIHGDKSQAERDWVLGEFKAGKSPIMTATDVAARGLDVKDIKCVIN 489
Query: 235 YDFPDSGAAYIHRI 248
YDFP S Y+HRI
Sbjct: 490 YDFPGSLEDYVHRI 503
>gi|452824515|gb|EME31517.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 624
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 6/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL I R KI L +++L+LDEAD++ ++G I +V+ P+
Sbjct: 304 GCDILVATPGRLVDMIERGKISLMNIKFLILDEADRMLDMG-FEPQIRQIVERTDMPTTG 362
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LA ++D + + VGR + ++ I Q+L E + L
Sbjct: 363 ERQTLMFSATFPKEIQRLASDFLYDYIFLAVGRVGSTTDFILQRLERVEEHEKRDFLL-- 420
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ ++++ LIF+Q+K A EL L G A IH D SQ +RE A+ FR G+T +
Sbjct: 421 NLIDTVSGLTLIFMQTKRGADELEYFLTRKGYPAISIHGDRSQVEREEALHSFRTGRTPI 480
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V V+N+D P Y+HRI
Sbjct: 481 LVATDVAARGLDIPNVTHVVNFDMPTDVDDYVHRI 515
>gi|294889264|ref|XP_002772733.1| ATP-dependent RNA helicase DED1, putative [Perkinsus marinus ATCC
50983]
gi|239877266|gb|EER04549.1| ATP-dependent RNA helicase DED1, putative [Perkinsus marinus ATCC
50983]
Length = 622
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 7/217 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI- 95
CDIL++TP RL + R ++ L +++ L+ DEAD++ ++G I +V+ PS
Sbjct: 339 GCDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSR 397
Query: 96 ---VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
++FSAT P +++LAR + D + + VGR + SIKQ + + E KL L
Sbjct: 398 DGRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLY 456
Query: 153 QSFAESLNPPV-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ E + L+FV++K +A E+ L D A IH D SQ +RE A+ F++G+
Sbjct: 457 RVLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQWEREEALKAFKSGEL 516
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D VN VINYD P++ Y+HRI
Sbjct: 517 PILVATDVAARGLDISHVNLVINYDLPNNIDDYVHRI 553
>gi|67624743|ref|XP_668654.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium hominis
TU502]
gi|54659828|gb|EAL38390.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium
hominis]
Length = 702
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 141/255 (55%), Gaps = 10/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIK-LMKKELVRST--DLSKFSCDILISTPLRLRLAIRRKKI 57
LA QT E +K G + L VRS DL + S DI+++TP RLR I R K+
Sbjct: 296 LAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGS-DIIVATPGRLRDLIDRGKV 354
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS----LFSATLPDFVEELAR 113
+L +++L+LDEAD++ ++G I +V+ P + +FSAT P +++LA+
Sbjct: 355 NLKLIKFLILDEADRMLDMG-FAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAK 413
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+H+ + + VGR S SI Q++V+A E+ K L + E ++FV+ K RA
Sbjct: 414 DFLHNYIFLTVGRVGATSGSIVQRVVYA-EEDHKPRLLVKLLLEQGEGLTVVFVEMKRRA 472
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
++ L A IH D SQ +RE+A+ FR+G+ +L+ATDV ARG+D + VI
Sbjct: 473 DQIEDFLIDQNFPAVSIHGDRSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVI 532
Query: 234 NYDFPDSGAAYIHRI 248
N D P + Y+HRI
Sbjct: 533 NLDMPCNIDDYVHRI 547
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+++I+TP RL ++ K +
Sbjct: 304 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGRLIDLLKMKALK 363
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 364 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPGRQTLLFSATMPYKVERLAREI 418
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 419 LTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPWLLEKLPGMIDDGDVLVFASKKARVD 478
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ EL G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 479 EIERELNQRGFRIAALHGDKDQASRMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVN 538
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 539 FDIAKEMDMHIHRI 552
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL ++ K +
Sbjct: 304 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK 363
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 364 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 418
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 419 LTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVD 478
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 479 EIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVN 538
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 539 FDIAKEMDMHIHRI 552
>gi|339634390|ref|YP_004726031.1| ATP-dependent RNA helicase/autoaggregation-mediating protein
[Weissella koreensis KACC 15510]
gi|420162019|ref|ZP_14668779.1| DEAD box ATP-dependent RNA helicase SrmB [Weissella koreensis KCTC
3621]
gi|338854186|gb|AEJ23352.1| ATP-dependent RNA helicase/autoaggregation-mediating protein
[Weissella koreensis KACC 15510]
gi|394744453|gb|EJF33395.1| DEAD box ATP-dependent RNA helicase SrmB [Weissella koreensis KCTC
3621]
Length = 537
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E KL + + +++ + ++ R D K DI++ TP RL IRR ID
Sbjct: 80 LAIQTQEELFKLGRDKRVRVQAVFGGADIRRQIDGLKRGVDIVVGTPGRLIDHIRRGTID 139
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS V LVLDEAD++ +G L+ I+ ++KA + LFSAT+P ++ + M +
Sbjct: 140 LSHVRTLVLDEADEMLNMG-FLEDIESILKAVPDERQT-LLFSATMPSAIKRIGVQFMTE 197
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+ V K ++ + Q V E K L A ++F ++K R EL
Sbjct: 198 PEHIQVAAKELTTDLVDQYYVRVREPE-KFDTLTNILAVQQPKLAILFGRTKRRVDELTR 256
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L G +A IH DL+Q +R + F+AG+ +L+ATDV ARG+D GV V N+D P
Sbjct: 257 GLELRGFKASGIHGDLTQQKRTQVLKSFKAGEIQILVATDVAARGLDVTGVTHVYNFDIP 316
Query: 239 DSGAAYIHRI 248
+Y+HRI
Sbjct: 317 QESESYVHRI 326
>gi|423128237|ref|ZP_17115916.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5250]
gi|376393593|gb|EHT06249.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5250]
Length = 449
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|215741236|dbj|BAG97731.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 30/269 (11%)
Query: 1 LATQTTRECKKLAKGNKFQIKL----------MKKELVRSTDLSKFSCDILISTPLRLRL 50
LA Q E KK + FQ L M +L DL + DIL++TP RL
Sbjct: 56 LAAQINEEAKKFS----FQTGLRVVVAYGGTPMYNQL---RDLER-GADILVATPGRLVD 107
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDF 107
+ R K+ L ++YLV+DEAD++ ++G I +V+ + P S+ ++ LFSAT P
Sbjct: 108 MVERSKVSLEAIKYLVMDEADRMLDMG-FEPQIRKIVERMNMPRKSVRQTMLFSATFPPE 166
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLAL--RQSFAES----L 159
++ LA + + + + VGR ++++ I QK L+ G + G LL L RQS +
Sbjct: 167 IQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQ 226
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
P L+FV++K A L L G A IH D +Q +RE+A+ F+ G T +++ATDV
Sbjct: 227 QPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDV 286
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+RG+D V VINYD P S Y+HRI
Sbjct: 287 ASRGLDVPNVAHVINYDLPKSIEDYVHRI 315
>gi|115468814|ref|NP_001058006.1| Os06g0602400 [Oryza sativa Japonica Group]
gi|113596046|dbj|BAF19920.1| Os06g0602400, partial [Oryza sativa Japonica Group]
Length = 484
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 30/269 (11%)
Query: 1 LATQTTRECKKLAKGNKFQIKL----------MKKELVRSTDLSKFSCDILISTPLRLRL 50
LA Q E KK + FQ L M +L DL + DIL++TP RL
Sbjct: 62 LAAQINEEAKKFS----FQTGLRVVVAYGGTPMYNQL---RDLER-GADILVATPGRLVD 113
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDF 107
+ R K+ L ++YLV+DEAD++ ++G I +V+ + P S+ ++ LFSAT P
Sbjct: 114 MVERSKVSLEAIKYLVMDEADRMLDMG-FEPQIRKIVERMNMPRKSVRQTMLFSATFPPE 172
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLAL--RQSFAES----L 159
++ LA + + + + VGR ++++ I QK L+ G + G LL L RQS +
Sbjct: 173 IQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQ 232
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
P L+FV++K A L L G A IH D +Q +RE+A+ F+ G T +++ATDV
Sbjct: 233 QPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDV 292
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+RG+D V VINYD P S Y+HRI
Sbjct: 293 ASRGLDVPNVAHVINYDLPKSIEDYVHRI 321
>gi|50554139|ref|XP_504478.1| YALI0E27715p [Yarrowia lipolytica]
gi|74659776|sp|Q6C4D4.1|DBP2_YARLI RecName: Full=ATP-dependent RNA helicase DBP2
gi|49650347|emb|CAG80081.1| YALI0E27715p [Yarrowia lipolytica CLIB122]
Length = 552
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q +EC K K +K + + + R + + +I+I+TP RL + K +
Sbjct: 201 LAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGVEIVIATPGRLLDMLESGKTN 260
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V+ LA
Sbjct: 261 LRRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQRLAHDY 315
Query: 116 MHDAVRVIVGR-KNTASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQSKER 172
+ D ++V +G + +AS +I Q + E +L+ ++ E+ LIF +K
Sbjct: 316 LKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDRLVKHLETVMENKESKCLIFTGTKRV 375
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A ++ L DG A IH D Q +R+ +++FR GK+ +++ATDV +RG+D KG+N V
Sbjct: 376 ADDITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGIDVKGINFV 435
Query: 233 INYDFPDSGAAYIHRI 248
INYD+P + Y+HRI
Sbjct: 436 INYDYPSNSEDYVHRI 451
>gi|315123425|ref|YP_004065431.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. SM9913]
gi|359438791|ref|ZP_09228788.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20311]
gi|359443935|ref|ZP_09233747.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20439]
gi|315017185|gb|ADT70522.1| ATP-dependent RNA helicase [Pseudoalteromonas sp. SM9913]
gi|358026522|dbj|GAA65037.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20311]
gi|358042240|dbj|GAA69996.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20439]
Length = 433
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L++V++LVLDEAD++ ++G + + V+K+C++
Sbjct: 121 KEGVDIVVATPGRLLDHIRLGNLSLAQVKHLVLDEADRMLDMG-FINDMQSVIKSCADER 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ V V + N+ + ++ Q +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI A V H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVTELNLDGIPAAVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+++I+TP RL ++ K +
Sbjct: 304 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGRLIDLLKMKALK 363
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 364 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPGRQTLLFSATMPYKVERLAREI 418
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 419 LTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPWLLEKLPGMIDDGDVLVFASKKARVD 478
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ EL G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 479 EIERELNQRGFRIAALHGDKDQASRMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVN 538
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 539 FDIAKEMDMHIHRI 552
>gi|423113365|ref|ZP_17101056.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5245]
gi|376388734|gb|EHT01427.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5245]
Length = 454
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|355575789|ref|ZP_09045162.1| hypothetical protein HMPREF1008_01139 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817005|gb|EHF01515.1| hypothetical protein HMPREF1008_01139 [Olsenella sp. oral taxon 809
str. F0356]
Length = 523
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ CD+L++TP RL+ + + + DLS V LVLDEAD++ ++G L + +V A PS
Sbjct: 139 RRGCDLLVATPGRLQDLMNQHEADLSSVRVLVLDEADRMLDMG-FLPDMRRIVAA--TPS 195
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSATL D V +S++ VRV V RK TA+E++ Q V S E K L +
Sbjct: 196 QRQTLLFSATLDDDVLSNTKSLVRHPVRVEVARKGTAAETVDQ-YVLPVSPEAKNAVLAE 254
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ V++F + K RA + +L G+ IH + SQ QRE A+ +FR G+ V
Sbjct: 255 LLRREGSRRVIVFCRGKHRADGICRKLRKAGVLCAPIHGNRSQNQRERALANFRDGQVDV 314
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV+ARG+D V+ V+N+D P YIHRI
Sbjct: 315 LVATDVLARGIDIPDVSYVVNFDVPGDAEDYIHRI 349
>gi|307941598|ref|ZP_07656953.1| ATP-dependent RNA helicase RhlE [Roseibium sp. TrichSKD4]
gi|307775206|gb|EFO34412.1| ATP-dependent RNA helicase RhlE [Roseibium sp. TrichSKD4]
Length = 436
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 122/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL + RK + L++ YLVLDEAD++ ++G + L+ I +V A +
Sbjct: 125 GTDILVATPGRLLDLVDRKAVHLNKASYLVLDEADQMLDLGFIHALRRIAGLV-AEKRQT 183
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+P +E+LAR+ +H RV V +E + Q + F ++ K L
Sbjct: 184 L---LFSATMPRQIEDLARTYLHKPERVEVAPAGKTAERVAQSVHFM-DQKAKSGFLVDM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E + L+F ++K A+ L L G+ AG IH + SQ QR+ A+ R G VL
Sbjct: 240 ICERADDTCLVFCRTKHGAERLMKRLVAAGVSAGSIHGNKSQNQRDRAIKGLREGTLKVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV+ V N++ P+ AY+HRI
Sbjct: 300 VATDVAARGIDIPGVSHVYNFELPEVAEAYVHRI 333
>gi|423107485|ref|ZP_17095180.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5243]
gi|376388510|gb|EHT01205.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5243]
Length = 454
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|409123261|ref|ZP_11222656.1| DEAD/DEAH box helicase [Gillisia sp. CBA3202]
Length = 632
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 19/216 (8%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSNP 93
I+++TP R++ I+RK +++S++EY +LDEAD++ +G N+L H P K+
Sbjct: 125 IIVATPGRMQDMIKRKLVNISQLEYCILDEADEMLNMGFFEDITNILSHT-PQEKSTW-- 181
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT+P V +A+ MHD V + VG KN ++ ++ + + + + ALR+
Sbjct: 182 -----LFSATMPREVATIAKKFMHDPVEITVGNKNESTTNVSHEYYLVNTRD-RYAALRR 235
Query: 154 SFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
A++ NP + +IF ++K +++ L DG A IH DLSQ QR+ + FR +
Sbjct: 236 -LADA-NPDIFSVIFCRTKRDTQKVAENLVEDGYSAAAIHGDLSQNQRDMVMKSFRNRQI 293
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+L+ATDV ARG+D + VINY PD Y HR
Sbjct: 294 QMLVATDVAARGIDVDDITHVINYQLPDEPEIYTHR 329
>gi|239831927|ref|ZP_04680256.1| DEAD/DEAH box helicase domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|239824194|gb|EEQ95762.1| DEAD/DEAH box helicase domain-containing protein [Ochrobactrum
intermedium LMG 3301]
Length = 470
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + + ++K L+ + + + + + + D+LI+TP RL +R +D
Sbjct: 107 LAVQIEQTIRNVSKHAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVD 166
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + KA + +LFSAT+P + LA S++ D
Sbjct: 167 LSQTRWLVLDEADRMLDMG-FINDVKRIAKATHSERQT-ALFSATMPKEIASLAGSLLRD 224
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V + T + I Q + ++E + L L + V++F ++K A +
Sbjct: 225 PVRVEVAPQGTTAAEITQVVHPVHTKEKRRL-LSALLGDKAMRSVIVFTRTKHGADAVVR 283
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L DG IH + SQ R+ A++ FR G +LIATD+ ARG+D G++ V+NYD P
Sbjct: 284 HLERDGYEVAAIHGNKSQNARQRALNGFRDGSLRILIATDIAARGIDVPGISHVVNYDLP 343
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 344 DEPETYVHRI 353
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + V++ V K++ +SIKQ + F +E L
Sbjct: 177 ---PKEKQTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSL 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+++TP RL ++ K +
Sbjct: 322 LAHQIFLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALT 381
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P V++ P LFSAT+P VE+LAR I
Sbjct: 382 MMRATYLVLDEADRMFDLG-----FEPQVRSIVGQIRPDRQTLLFSATMPCKVEKLAREI 436
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + E ++ L+F K
Sbjct: 437 LSDPIRVTVGEVGMANEDITQVVHVTPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVD 496
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +LA G + +H D Q R + + F++G VLIATDV ARG+D K + V+N
Sbjct: 497 EIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVN 556
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 557 FDIAKDMDMHVHRI 570
>gi|387907207|ref|YP_006337543.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582100|gb|AFJ90878.1| ATP-dependent RNA helicase [Blattabacterium sp. (Blaberus
giganteus)]
Length = 547
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 8/211 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
I++ TP R+ I+RKK+ + V+YLVLDEAD++ +G +D +++ P +SL
Sbjct: 126 IIVGTPGRIIDLIKRKKLYFNEVQYLVLDEADEMLNMG-FKDELDYIIEKL--PKKKQSL 182
Query: 100 -FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES 158
FSAT+ ++ +A+ + D V ++VG+KN S+ +K + K LAL++
Sbjct: 183 LFSATMSRYMNAIAKKYLIDPVEIVVGKKNIGSDDVKHVYYIIENFSKKYLALKR--IVD 240
Query: 159 LNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+NP + +IF +K+ KE+ L D A +H DLSQTQRE+ ++ FR +L+A
Sbjct: 241 INPDIYGIIFCSTKKETKEIAEFLIKDSYNADALHGDLSQTQRESVMNKFRNRNLQLLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
TDV ARG+D + VINY P+ Y+HR
Sbjct: 301 TDVAARGLDVNNITHVINYSIPNESETYVHR 331
>gi|423225777|ref|ZP_17212244.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631362|gb|EIY25335.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 422
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLLAHLSLGYVDLSRVSYFILDEADRMLDMG-FFDDIMQIVKYL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSRPADKIVQA--AYVCYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKMMKLNVGEMHSDLEQAQREEVMHEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D+L++TP RL + + + L +E VLDEAD++ ++G + + V+KA P
Sbjct: 124 GVDVLVATPGRLLDLMEQGFVSLRSLEVFVLDEADRMLDMG-FIHDVRRVIKALP-PKRQ 181
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSATLP + +LARSI+ D +RV V ++ +E++ Q++ F E+ + L L
Sbjct: 182 TLFFSATLPPDIVDLARSILTDPIRVEVSPASSTAETVSQQVYFVEREQKRGL-LTHLLK 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E L+F ++K A + +L G+ + IH + SQ RE A+D+FR+G VL+A
Sbjct: 241 EGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D G++ V+NYD P+ Y+HRI
Sbjct: 301 TDIAARGIDIDGLSYVVNYDLPNVPEQYVHRI 332
>gi|410671946|ref|YP_006924317.1| DEAD/DEAH box helicase-like protein [Methanolobus psychrophilus
R15]
gi|409171074|gb|AFV24949.1| DEAD/DEAH box helicase-like protein [Methanolobus psychrophilus
R15]
Length = 408
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + + LS VE+ VLDEAD++ ++G +K ++ +V P
Sbjct: 124 GVDILVATPGRLLDLMDQGIVKLSGVEFFVLDEADRMLDMG-FIKDVNRIVSML--PHKR 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+SLF SAT+ + EL R ++ D VRV V + T E I+QK+ F E L L
Sbjct: 181 QSLFFSATMSPQISELTRRLLTDPVRVEVTPQATTVERIEQKVFFVDQENKDALLLSLLQ 240
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ LN VL+F ++K RA ++ L + + A IH + SQ R ++ FRAG+ VL+
Sbjct: 241 QDHLNC-VLVFTRTKHRANKVAQTLNKNRVGADAIHGNKSQAHRTRVMESFRAGELQVLV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D + ++ VINYD P+ +Y+HRI
Sbjct: 300 ATDIAARGIDIEDISHVINYDLPNEPESYVHRI 332
>gi|359448696|ref|ZP_09238216.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
gi|358045506|dbj|GAA74465.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
Length = 433
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q CK+ AK ++ + + K DI+++TP RL IR +
Sbjct: 85 LAEQIANNCKEYAKHTSLKVVSLFGGVNTAGQENALKAGVDIVVATPGRLLDHIRLGNLS 144
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V++LVLDEAD++ ++G + + V+K+C++ + LFSAT P +++ A ++
Sbjct: 145 LANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDRQIL-LFSATFPAAIKQFASKVLKQ 202
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V V + N+ + ++ Q +V+ E K L + + VL+FV K+ A EL
Sbjct: 203 PEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSELIGKKNWQQVLVFVNMKDTADELVK 261
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI A V H D SQ R A+ +F+ GK VL+AT+V ARG+D G+ VIN D P
Sbjct: 262 ELNLDGIPATVCHGDKSQGNRRRALREFKEGKVRVLVATEVAARGIDIDGLPRVINIDLP 321
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 322 WLAEDYVHRI 331
>gi|330009971|ref|ZP_08306668.1| ATP-dependent RNA helicase RhlE, partial [Klebsiella sp. MS 92-3]
gi|328534645|gb|EGF61216.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. MS 92-3]
Length = 509
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 183 GVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLPAR 238
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L Q
Sbjct: 239 RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LSQL 297
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 298 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVL 357
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 358 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 391
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C++L++TP RL + +K ++LS+V LVLDEAD++ ++G L ++ +++ P
Sbjct: 141 GCEVLVATPGRLLDHVEQKNVNLSQVGILVLDEADRMLDMG-FLPDLERIIRLLP-PQRQ 198
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT + + +L RS ++ V + V +N ++++ Q + + + E K A+
Sbjct: 199 GLLFSATFSNEIRKLGRSYLNQPVEIEVAARNATADTVTQ-IAYQMTGEAKRAAVVHLVK 257
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
V++F +K L +L DG++A IH D SQ R A++ F+AG+ VL+A
Sbjct: 258 SRGLKQVIVFSNTKIGTARLARQLELDGVKAESIHGDKSQADRMKALEAFKAGELEVLVA 317
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D GV CVINYD P + Y+HRI
Sbjct: 318 TDVAARGLDVAGVPCVINYDLPYNAEDYVHRI 349
>gi|423119382|ref|ZP_17107066.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5246]
gi|376398561|gb|EHT11185.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5246]
Length = 466
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDVLVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|449458179|ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
Length = 505
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K +K + + + + DL K +I+I+TP RL +
Sbjct: 184 LAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQK-GVEIVIATPGRLIDMMESHHT 242
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G DP ++ + P +SAT P VE+LAR
Sbjct: 243 NLRRVTYLVLDEADRMLDMG-----FDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQ 297
Query: 115 IMHDAVRVIVGRKN-TASESIKQK--LVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+++ +VI+G + A+ +I+Q +V + KL+ L + + +LIF+ +K+
Sbjct: 298 FLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSR--ILIFMDTKK 355
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +FR+GK+ ++ ATDV ARG+D K V
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKY 415
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 416 VINYDFPGSLEDYVHRI 432
>gi|375259807|ref|YP_005018977.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca KCTC 1686]
gi|397656870|ref|YP_006497572.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca E718]
gi|402843597|ref|ZP_10891991.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. OBRC7]
gi|423102058|ref|ZP_17089760.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5242]
gi|365909285|gb|AEX04738.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca KCTC 1686]
gi|376389954|gb|EHT02641.1| ATP-dependent RNA helicase rhlE [Klebsiella oxytoca 10-5242]
gi|394345401|gb|AFN31522.1| ATP-dependent RNA helicase RhlE [Klebsiella oxytoca E718]
gi|402276707|gb|EJU25808.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. OBRC7]
Length = 449
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|365988008|ref|XP_003670835.1| hypothetical protein NDAI_0F02740 [Naumovozyma dairenensis CBS 421]
gi|343769606|emb|CCD25592.1| hypothetical protein NDAI_0F02740 [Naumovozyma dairenensis CBS 421]
Length = 561
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 143/258 (55%), Gaps = 17/258 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +EC K ++ + + + R DLS+ S +I+I+TP RL + K
Sbjct: 203 LAVQIQKECSKFGHSSRIRNTCVYGGVPRGQQIRDLSRGS-EIVIATPGRLIDMLEIGKT 261
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LA
Sbjct: 262 NLKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLASD 316
Query: 115 IMHDAVRVIVGR-KNTASESIKQKLVFAGSE---EGKLLALRQSFAESLNPPVLIFVQSK 170
++D ++V VG + +AS +I Q LV SE +LL ++ +E +LIF +K
Sbjct: 317 YLNDPIQVQVGSLELSASHNIAQ-LVEVLSEFEKRDRLLKHLETASEDKESKILIFASTK 375
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
E+ L DG A IH D Q +R+ + +FRAG + +++ATDV ARG+D KG+N
Sbjct: 376 RMCDEITKMLREDGWPALAIHGDKDQRERDWVLGEFRAGNSPIMVATDVAARGIDVKGIN 435
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P + Y+HRI
Sbjct: 436 FVINYDMPGNIEDYVHRI 453
>gi|452943512|ref|YP_007499677.1| DEAD/DEAH box helicase domain protein [Hydrogenobaculum sp. HO]
gi|452881930|gb|AGG14634.1| DEAD/DEAH box helicase domain protein [Hydrogenobaculum sp. HO]
Length = 364
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ DILI TP R++ I RK ++LS VEYLVLDE D++ ++G ++ I+ ++
Sbjct: 119 NVDILIGTPGRIKDLIDRKALNLSNVEYLVLDEFDQMLDMG-FIEDIEYIISFLPKERTT 177
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT+P+ +E LA+ + + +I++K++ S K+ L
Sbjct: 178 -YMFSATVPNRIELLAKRFLKSDFKFEKVPSVELKPNIEEKMIKLSSPGEKIHELMHIID 236
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+L+FV++K+ AK+L+ L GIR +H DL+Q QRE A+ F++G +LIA
Sbjct: 237 THPMEKMLVFVKTKKDAKDLFFLLTKKGIRVQALHGDLTQRQREKALSAFKSGAVSILIA 296
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D K V VINY+ P+ YIHRI
Sbjct: 297 TDVAARGLDIKDVGVVINYNIPEDPELYIHRI 328
>gi|167763057|ref|ZP_02435184.1| hypothetical protein BACSTE_01423 [Bacteroides stercoris ATCC
43183]
gi|167699397|gb|EDS15976.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 430
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKFL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA++I+H+ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLAQNILHNPAEVKLAVSKPAEKIVQ--AAYICYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVAKALKQMKLNVGEMHSDLEQAQREEVMYEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|189465693|ref|ZP_03014478.1| hypothetical protein BACINT_02054 [Bacteroides intestinalis DSM
17393]
gi|189433957|gb|EDV02942.1| DEAD/DEAH box helicase [Bacteroides intestinalis DSM 17393]
Length = 428
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKYL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSRPAEKIVQA--AYVCYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKMMKLNVGEMHSDLEQAQREEVMHEFKAGRVNIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|50293017|ref|XP_448941.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661092|sp|Q6FLF3.1|DBP2_CANGA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49528254|emb|CAG61911.1| unnamed protein product [Candida glabrata]
Length = 544
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 137/256 (53%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K K ++ + + + R + + +I+I+TP RL + K +
Sbjct: 195 LAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTN 254
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 255 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 309
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSE---EGKLLALRQSFAESLNPPVLIFVQSKER 172
++D ++V +G A+ +LV SE +L+ + ++ +LIF +K
Sbjct: 310 LNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRT 369
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +++FR G + +++ATDV ARG+D KG+N V
Sbjct: 370 CDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFV 429
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P + Y+HRI
Sbjct: 430 VNYDMPGNIEDYVHRI 445
>gi|392537500|ref|ZP_10284637.1| ATP-dependent RNA helicase [Pseudoalteromonas marina mano4]
Length = 433
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q CK+ AK ++ + + K DI+++TP RL IR +
Sbjct: 85 LAEQIANNCKEYAKHTSLKVVSLFGGVNTAGQENALKAGVDIVVATPGRLLDHIRLGNLS 144
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V++LVLDEAD++ ++G + + V+K+C++ + LFSAT P +++ A ++
Sbjct: 145 LANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDRQIL-LFSATFPAAIKQFASKVLKQ 202
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V V + N+ + ++ Q +V+ E K L + + VL+FV K+ A EL
Sbjct: 203 PEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSELIGKKNWQQVLVFVNMKDTADELVK 261
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI A V H D SQ R A+ +F+ GK VL+AT+V ARG+D G+ VIN D P
Sbjct: 262 ELNLDGIPATVCHGDKSQGNRRRALREFKEGKVRVLVATEVAARGIDIDGLPRVINIDLP 321
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 322 WLAEDYVHRI 331
>gi|429770137|ref|ZP_19302216.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
gi|429185399|gb|EKY26379.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
Length = 491
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 95
D+L++ P RL I++K +DLS E VLDEAD++ ++G I P+ + S P+
Sbjct: 119 GLDVLVAAPGRLLDHIQQKTLDLSSTEIFVLDEADQMLDLG----FIKPIRQIVSRIPAK 174
Query: 96 VRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-RQ 153
++LF SAT+P + +LA ++ D V+V V + T E IKQ +++ E+GK AL +
Sbjct: 175 RQNLFFSATMPSEIGKLAGELLKDPVKVQVTPQATTVERIKQSVIWV--EQGKKRALLTE 232
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
F+ L+F ++K A ++ L G+ AG IH + SQ QRE A++ F+ GK V
Sbjct: 233 LFSAPAYTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQPQRERALEAFKNGKLRV 292
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D V V+N++ P AY+HRI
Sbjct: 293 LVATDIAARGIDVDKVTHVVNFELPYVPEAYVHRI 327
>gi|402082038|gb|EJT77183.1| hypothetical protein GGTG_07095 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 685
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 128/218 (58%), Gaps = 8/218 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R ++ L ++YL+LDEAD++ ++G I +V+ P++
Sbjct: 328 GCDLLVATPGRLVDLIERGRVSLCNIKYLILDEADRMLDMG-FEPQIRRIVEGEDMPNVN 386
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK---LLA 150
+FSAT P+++++LAR + D V + VGR + SE+I Q+++ ++ K L+
Sbjct: 387 DRQTLMFSATFPEYIQKLARDFLKDYVFLSVGRVGSTSENITQRVIEVHGKDDKDSFLID 446
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L ++ E+ L+FV++K A EL L + A IH D +Q +RE A++ FR G+
Sbjct: 447 LLENDKETGGL-TLVFVETKRNADELSYFLQNRNLPATAIHGDRTQRERERALELFRTGR 505
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 506 CPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 543
>gi|262041112|ref|ZP_06014330.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041562|gb|EEW42615.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 519
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 193 GVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMG----FIHDIRRVLAKLPAR 248
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L Q
Sbjct: 249 RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LSQL 307
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 308 IGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVL 367
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 368 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 401
>gi|418937787|ref|ZP_13491383.1| DEAD/DEAH box helicase domain protein [Rhizobium sp. PDO1-076]
gi|375055471|gb|EHS51723.1| DEAD/DEAH box helicase domain protein [Rhizobium sp. PDO1-076]
Length = 478
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I R I L V +LVLDEAD++ ++G + L+ I +V A
Sbjct: 140 GTDILVATPGRLLDLIARNAISLRAVTFLVLDEADQMLDLGFIHDLRKISKMVPAKRQ-- 197
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA + +++ +V V A++ ++Q + F + K L++
Sbjct: 198 --TLLFSATMPSSIADLAATFLNNPAKVAVTAPGKAADKVEQHVHFVAGQNAKTEMLKKI 255
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
E+ + ++F+++K A++L L +G IH + SQ QRE A+ FR G+ L
Sbjct: 256 LVENPDGRSIVFLRTKHGAEKLMKHLEVNGFSVASIHGNKSQGQRERALKGFRDGEIRTL 315
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 316 IATDVAARGIDIPAVSHVFNYDLPEVPDAYVHRI 349
>gi|237681149|ref|NP_001153721.1| ATP-dependent RNA helicase belle [Tribolium castaneum]
gi|270008148|gb|EFA04596.1| belle [Tribolium castaneum]
Length = 699
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 23/264 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK-----ELVRSTDLSKFSCDILISTPLRLRLAIRRK 55
LATQ E KK A ++ + ++ + +R D C +L++TP RL I R
Sbjct: 307 LATQIYDESKKFAYRSRVRPCVVYGGAHIGDQMRDLDRG---CHLLVATPGRLLDMIDRG 363
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELA 112
+I L YLVLDEAD++ ++G L+ I +V+ + P +FSAT P ++ LA
Sbjct: 364 RIGLDYCRYLVLDEADRMLDMGFELQ-IRRIVEKETMPKTGERQTLMFSATFPSPIQMLA 422
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL--------RQSFAESLNPPVL 164
R + + + + VGR + SE+I QK+V+ + + L Q AESL L
Sbjct: 423 RDFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKRSFLLDLLNAAEMSQPSAESL---TL 479
Query: 165 IFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGM 224
+FV++K+ A L L F+G IH D SQ +RE+A+ FR+G T +L+AT V ARG+
Sbjct: 480 VFVETKKGADSLEEFLHFEGYPVTSIHGDRSQREREDALRQFRSGNTPILVATAVAARGL 539
Query: 225 DFKGVNCVINYDFPDSGAAYIHRI 248
D V VIN+D P Y+HRI
Sbjct: 540 DIPHVKHVINFDLPSDIEEYVHRI 563
>gi|395777935|ref|ZP_10458448.1| hypothetical protein MCU_00149 [Bartonella elizabethae Re6043vi]
gi|423715861|ref|ZP_17690082.1| hypothetical protein MEE_01279 [Bartonella elizabethae F9251]
gi|395418244|gb|EJF84571.1| hypothetical protein MCU_00149 [Bartonella elizabethae Re6043vi]
gi|395429163|gb|EJF95237.1| hypothetical protein MEE_01279 [Bartonella elizabethae F9251]
Length = 471
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + +AKG L+ + R + + D+LI+TP RLR +R K +D
Sbjct: 103 LAVQIDEAIRTVAKGAHLSTCLIFGGVSRLKQIKRMEAGVDVLIATPGRLRDLVREKCVD 162
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +L+LDEAD++ ++G + + + K +LFSAT+P + LA+ +++D
Sbjct: 163 LSQSRFLILDEADRMLDMG-FIHDVKQIAKLLHQERQT-ALFSATMPKEIAALAKCLLND 220
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V++ V + T + I QKL + E K + + + N V++F ++K A +
Sbjct: 221 PVKIEVVPQGTTAVEIAQKLYCVPTSEKKNVLSKLLTNPAFNS-VIVFTRTKHGADAVTR 279
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
LA G IH + SQ R++A+ FR +L+ATD+ ARG+D G++ VINYD P
Sbjct: 280 HLAKIGYLVTTIHGNKSQGARQSALKAFRERSVQILVATDIAARGIDIPGISHVINYDLP 339
Query: 239 DSGAAYIHRI 248
D +Y+HRI
Sbjct: 340 DEAESYVHRI 349
>gi|387594137|gb|EIJ89161.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm3]
gi|387595665|gb|EIJ93288.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm1]
Length = 511
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 123/219 (56%), Gaps = 11/219 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
+ILI+TP RL +K + +SRV +LVLDEAD++ ++G LK I P +NP
Sbjct: 216 GAEILIATPGRLIDLFDQKAVFMSRVSFLVLDEADRMLDMGFEPQLKKIIPE----TNPK 271
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGS-EEGKLLA-- 150
++SAT P V LAR+ M D ++V +G + A+ I QK E+ K+L+
Sbjct: 272 RQTLMWSATWPKEVRSLARNYMTDYIQVKIGSADLVANVKITQKTFMVDHWEKDKMLSDV 331
Query: 151 -LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
+ E NP ++IF K R +L ++ G A +H D Q QR+ + DF++G
Sbjct: 332 LTDVAGDEKANPKIIIFCNQKRRCDDLVDKMQEYGWPAEALHGDKPQNQRDRIIQDFKSG 391
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
K +L+ATDV ARG+D K V VINYDFP + YIHRI
Sbjct: 392 KRSILVATDVAARGLDVKDVKAVINYDFPTNCEDYIHRI 430
>gi|409911469|ref|YP_006889934.1| ATP-dependent RNA helicase RhlE [Geobacter sulfurreducens KN400]
gi|298505039|gb|ADI83762.1| ATP-dependent RNA helicase RhlE [Geobacter sulfurreducens KN400]
Length = 446
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 125/221 (56%), Gaps = 18/221 (8%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL------LKHIDPVVK 88
K +++++ P RL I + IDLSR+E LVLDEAD++F++G L LKH+
Sbjct: 118 KAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHL----- 172
Query: 89 ACSNPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK 147
PS ++L FSAT+P + LA+ I+ D V V VG N A ++ + K
Sbjct: 173 ----PSRRQTLLFSATMPIDIRALAQEILVDPVTVQVG--NVAPAVTVAHALYPVEQHLK 226
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
L + + VLIF ++K RAK L +L G RA + +LSQ +R+ A+D FR
Sbjct: 227 TPLLLELLRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFR 286
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G +L+ATD+ ARG+D V+ VINYD PD+ AYIHRI
Sbjct: 287 DGTYQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRI 327
>gi|119468751|ref|ZP_01611803.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Alteromonadales bacterium TW-7]
gi|119447807|gb|EAW29073.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Alteromonadales bacterium TW-7]
Length = 433
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q CK+ AK ++ + + K DI+++TP RL IR +
Sbjct: 85 LAEQIANNCKEYAKHTSLKVVSLFGGVNTAGQENALKAGVDIVVATPGRLLDHIRLGNLS 144
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V++LVLDEAD++ ++G + + V+K+C++ + LFSAT P +++ A ++
Sbjct: 145 LANVKHLVLDEADRMLDMG-FITDMQTVIKSCADDRQIL-LFSATFPAAIKQFASKVLKQ 202
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V V + N+ + ++ Q +V+ E K L + + VL+FV K+ A EL
Sbjct: 203 PEIVRVDQTNSTASTV-QHVVYPVEERRKQELLSELIGKKNWQQVLVFVNMKDTADELVK 261
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI A V H D SQ R A+ +F+ GK VL+AT+V ARG+D G+ VIN D P
Sbjct: 262 ELNLDGIPATVCHGDKSQGNRRRALREFKEGKVRVLVATEVAARGIDIDGLPRVINIDLP 321
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 322 WLAEDYVHRI 331
>gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52A
gi|51090883|dbj|BAD35456.1| putative DEAD-box protein 3 [Oryza sativa Japonica Group]
gi|222635845|gb|EEE65977.1| hypothetical protein OsJ_21891 [Oryza sativa Japonica Group]
Length = 602
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 30/269 (11%)
Query: 1 LATQTTRECKKLAKGNKFQIKL----------MKKELVRSTDLSKFSCDILISTPLRLRL 50
LA Q E KK + FQ L M +L DL + DIL++TP RL
Sbjct: 180 LAAQINEEAKKFS----FQTGLRVVVAYGGTPMYNQL---RDLER-GADILVATPGRLVD 231
Query: 51 AIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDF 107
+ R K+ L ++YLV+DEAD++ ++G I +V+ + P S+ ++ LFSAT P
Sbjct: 232 MVERSKVSLEAIKYLVMDEADRMLDMG-FEPQIRKIVERMNMPRKSVRQTMLFSATFPPE 290
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLAL--RQSFAES----L 159
++ LA + + + + VGR ++++ I QK L+ G + G LL L RQS +
Sbjct: 291 IQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQ 350
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
P L+FV++K A L L G A IH D +Q +RE+A+ F+ G T +++ATDV
Sbjct: 351 QPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDV 410
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+RG+D V VINYD P S Y+HRI
Sbjct: 411 ASRGLDVPNVAHVINYDLPKSIEDYVHRI 439
>gi|336406430|ref|ZP_08587085.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345509853|ref|ZP_08789440.1| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
gi|335934634|gb|EGM96619.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345454658|gb|EEO51805.2| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
Length = 382
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
DL + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 127 DLLRKGIDILVATPGRLLDLMSQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 184
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 185 ---PKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQLVYFVEKKEKSQ 241
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 242 L-LISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 300
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 301 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 340
>gi|50289021|ref|XP_446940.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661294|sp|Q6FS54.1|DBP3_CANGA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49526249|emb|CAG59873.1| unnamed protein product [Candida glabrata]
Length = 540
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 7/217 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
+++++TP RL I +DLS V+Y+VLDEAD++ E G + I ++ +
Sbjct: 249 SNVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKG-FEEDIKRIIGQTKSKDRQT 307
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 153
+F+AT P V ELA + M + V+V +G ++ +A++ I Q ++V S+E KLL L +
Sbjct: 308 LMFTATWPKEVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLK 367
Query: 154 SF--AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ N VLIF K+ A + L ++G + IH DLSQ QR A+++F++GK+
Sbjct: 368 KYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKS 427
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 428 NLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 464
>gi|444308511|ref|ZP_21144156.1| DEAD/DEAH box helicase [Ochrobactrum intermedium M86]
gi|443488094|gb|ELT50851.1| DEAD/DEAH box helicase [Ochrobactrum intermedium M86]
Length = 463
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + + ++K L+ + + + + + + D+LI+TP RL +R +D
Sbjct: 100 LAVQIEQTIRNVSKHAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVD 159
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + KA + +LFSAT+P + LA S++ D
Sbjct: 160 LSQTRWLVLDEADRMLDMG-FINDVKRIAKATHSERQT-ALFSATMPKEIASLAGSLLRD 217
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V + T + I Q + ++E + L L + V++F ++K A +
Sbjct: 218 PVRVEVAPQGTTAAEITQVVHPVHTKEKRRL-LSALLGDKAMRSVIVFTRTKHGADAVVR 276
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L DG IH + SQ R+ A++ FR G +LIATD+ ARG+D G++ V+NYD P
Sbjct: 277 HLERDGYEVAAIHGNKSQNARQRALNGFRDGSLRILIATDIAARGIDVPGISHVVNYDLP 336
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 337 DEPETYVHRI 346
>gi|402488920|ref|ZP_10835725.1| DEAD/DEAH box helicase [Rhizobium sp. CCGE 510]
gi|401812104|gb|EJT04461.1| DEAD/DEAH box helicase [Rhizobium sp. CCGE 510]
Length = 553
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDILVATPGRLLDLINRRAISLTTVRYLVLDEADQMLD 163
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V+V V A++
Sbjct: 164 LGFVHDLRKIAKMVPKKRQ----TMLFSATMPKAIADLAGDYLVDPVKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 220 VEQYVHFVAGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLENIGYSVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 334
>gi|423298414|ref|ZP_17276472.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
gi|392663326|gb|EIY56877.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
Length = 374
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L +++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIHLDKIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + VR+ + K++ ++I+Q + F +E L
Sbjct: 177 ---PKEKQTLFFSATMPDTIISLTNSLLKNPVRISITPKSSTVDAIEQMVYFVEKKEKSL 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VL+F ++K A ++ L GI + IH + SQ R+ A+ +F++
Sbjct: 234 L-LVSILQKSEDQSVLVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ ARG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIAARGIDINELPLVINYDLPDVPETYVHRI 332
>gi|325185732|emb|CCA20213.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 551
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 126/217 (58%), Gaps = 5/217 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K D++++TP RL + + DL+ V + VLDEAD++ + G K I ++ + S
Sbjct: 259 KSGVDVIVATPGRLNDLVNERVCDLTNVTFTVLDEADRMLDDG-FEKDIRLIMSSVHKES 317
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLAL 151
+ ++FSAT P +++LA +HD V+V +G + AS S+ Q +++ + + ++ AL
Sbjct: 318 QI-AMFSATWPQSIQKLAHEFLHDPVKVTIGSDDLAASVSVTQIVEVIEDRARDARIHAL 376
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
Q + + +LIFV K+ A + +L + G IH D SQ QR AV++F++G
Sbjct: 377 LQKYHYTRKNLILIFVLYKKEADRVERDLRYRGWNCAAIHGDRSQQQRNEAVENFKSGDI 436
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+LIATDV ARG+D GV VINY FP + Y+HRI
Sbjct: 437 PLLIATDVAARGLDIPGVEYVINYAFPLTIEDYVHRI 473
>gi|406706051|ref|YP_006756404.1| helicase family protein,DEAD/DEAH box helicase [alpha
proteobacterium HIMB5]
gi|406651827|gb|AFS47227.1| helicase family protein,DEAD/DEAH box helicase [alpha
proteobacterium HIMB5]
Length = 431
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 20/232 (8%)
Query: 23 MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN---- 78
M+K+L + T ++ I++ TP R+ I RK + L +V YLVLDE D++ ++G
Sbjct: 110 MQKQLRQLTKRTR----IIVGTPGRINDHIERKSLKLYKVTYLVLDETDRMLDMGFTPQI 165
Query: 79 --LLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQ 136
+L+HI + LFSATLPD + +++ + + RV VG +T E IKQ
Sbjct: 166 ELILRHIPKSHQTL--------LFSATLPDDILKISEKYLKNPERVSVGSVSTPIEKIKQ 217
Query: 137 KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQ 196
K F + + K L E + +L+FV++K A ++ L +DG A IH +L Q
Sbjct: 218 K-TFQITPDKKYHELINQLVER-SGSILVFVKTKHGADKIVKRLKYDGHSADAIHGNLRQ 275
Query: 197 TQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++R+ + FR+GK+ +L+ATDV ARG+D + VINYD P YIHRI
Sbjct: 276 SKRDRVIRGFRSGKSRILVATDVAARGLDIPLIQHVINYDLPQVPEDYIHRI 327
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK +K + ++ + + + K CDI+++TP RL ++ K ++
Sbjct: 309 LAHQIYLEAKKFSKSHGIRVSAVYGGMSKLEQFKELKAGCDIVVATPGRLIDLLKMKALN 368
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+S+ YLVLDEAD++F++G +P +++ P LFSAT+P VE+LAR I
Sbjct: 369 MSKATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 423
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + ++ VL+F K
Sbjct: 424 LSDPIRVTVGEVGMANEDITQVVQVIPSDAEKLPWLFEKLPGMIDDGDVLVFASKKATVD 483
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +LA G + +H D Q R + F++G VLIATDV ARG+D K + V+N
Sbjct: 484 EIESQLAQKGFKVAALHGDKDQASRMEILQKFKSGVYHVLIATDVAARGLDIKSLKSVVN 543
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 544 FDIARDMDMHVHRI 557
>gi|241747700|ref|XP_002414349.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215508203|gb|EEC17657.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 519
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 13/216 (6%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC---SNPSIV 96
I I+TP RL + I+L R YLVLDEAD++ ++G +P ++ + P
Sbjct: 221 ICIATPGRLLDILETGAINLLRCSYLVLDEADRMLDMG-----FEPQIRKIVDQTRPDRQ 275
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSE-EGKLL-ALR 152
++SAT P V +LA + D V++ VG ++ A+ +I+Q + V G E E KLL LR
Sbjct: 276 TVMWSATWPSEVRDLAEEFLTDHVQITVGSEDLCANHNIRQVVHVCQGFEKEEKLLETLR 335
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ AE + LIFV +K R + L +G RA H DLSQ +R+ A+D FR+GKT
Sbjct: 336 EINAEG-DQRTLIFVATKARVVTIVQNLYKNGFRAVATHGDLSQNKRDIALDRFRSGKTP 394
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D + VINYD+PD+ +Y+HRI
Sbjct: 395 ILVATDVAARGLDVSDIKYVINYDYPDTSESYVHRI 430
>gi|442320812|ref|YP_007360833.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
gi|441488454|gb|AGC45149.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
Length = 497
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 127/213 (59%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D+L++TP RL + + + L +E VLDEAD++ ++G + + V+KA PS
Sbjct: 124 GVDVLVATPGRLLDLMDQGYVSLRSLEVFVLDEADRMLDMG-FIHDVRKVIKAL--PSKR 180
Query: 97 RSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++LF SAT+P + +L+R+++ D VRV V ++ +E++ Q++ F E+ + L L
Sbjct: 181 QTLFFSATMPPEIVDLSRNLLTDPVRVEVTPVSSTAETVAQQVFFVEREQKRGL-LTHLL 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ L+F ++K A + +L G+ A IH + SQ RE A+DDFR+G VL+
Sbjct: 240 KDGKISRALVFTRTKHGANRVAKQLEGSGVSAAAIHGNKSQNARERALDDFRSGTLRVLV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D G++ VINYD P+ Y+HRI
Sbjct: 300 ATDIAARGIDIDGLSFVINYDLPNVPEQYVHRI 332
>gi|298704856|emb|CBJ28373.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 519
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 138/255 (54%), Gaps = 13/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q EC K + ++ + + + ++ DL++ +I+I+TP RL + K
Sbjct: 211 LAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNR-GVEIVIATPGRLIDLLESGKT 269
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V+ LAR
Sbjct: 270 NLRRVTYLVLDEADRMLDMG-----FEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARD 324
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSKERA 173
+H +V VG A+ ++++ + K +L + + N VL+FV++K+
Sbjct: 325 FLHHYYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGC 384
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L DG +A IH D +Q +R+ + DF+ G VL+ATDV ARG+D K + VI
Sbjct: 385 DALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVI 444
Query: 234 NYDFPDSGAAYIHRI 248
N+DFP++ YIHRI
Sbjct: 445 NFDFPNNMEDYIHRI 459
>gi|291407215|ref|XP_002720005.1| PREDICTED: CG7878-like [Oryctolagus cuniculus]
Length = 635
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 133/252 (52%), Gaps = 8/252 (3%)
Query: 1 LATQTTRECKKLA-KGNKFQ-IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC K + KG K I + D++K DI+I+TP RL ++
Sbjct: 316 LALQVESECSKYSYKGFKSSCIYGGGNRRGQIEDIAK-GVDIIIATPGRLNDLQLNNHVN 374
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L + YLVLDEADK+ ++G +H + P + SAT PD + LA S + D
Sbjct: 375 LRSITYLVLDEADKMLDLG--FEHQIMKILLDVRPDRQTVMTSATWPDAIRRLAHSYLKD 432
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKERAKEL 176
+ V VG + + S Q+ V +EE K AL Q F E++ P V++FV K A +L
Sbjct: 433 PMMVYVGTLDLVAVSTVQQNVIVTTEEEKR-ALIQEFLENMTPRDKVIVFVSRKITADDL 491
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+L GI +H D Q+ RE A++DFR GK +LIATD+ +RG+D + V NYD
Sbjct: 492 ASDLGIQGIPIESLHGDREQSDREQALEDFRTGKVKILIATDLASRGLDVNDITHVYNYD 551
Query: 237 FPDSGAAYIHRI 248
FP + Y+HRI
Sbjct: 552 FPRNIEEYVHRI 563
>gi|160883549|ref|ZP_02064552.1| hypothetical protein BACOVA_01521 [Bacteroides ovatus ATCC 8483]
gi|237722794|ref|ZP_04553275.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371813|ref|ZP_06618223.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|299147643|ref|ZP_07040707.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|336416998|ref|ZP_08597329.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|423291591|ref|ZP_17270438.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
gi|156110962|gb|EDO12707.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229447316|gb|EEO53107.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633265|gb|EFF51836.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|298514430|gb|EFI38315.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|335937042|gb|EGM98952.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|392662714|gb|EIY56270.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
Length = 374
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L +++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIHLDKIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + VR+ + K++ ++I+Q + F +E L
Sbjct: 177 ---PKEKQTLFFSATMPDTIISLTNSLLKNPVRISITPKSSTVDAIEQMVYFVEKKEKSL 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VL+F ++K A ++ L GI + IH + SQ R+ A+ +F++
Sbjct: 234 L-LVSILQKSEDQSVLVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ ARG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIAARGIDINELPLVINYDLPDVPETYVHRI 332
>gi|383113927|ref|ZP_09934694.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
gi|313697186|gb|EFS34021.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
Length = 374
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L +++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIHLDKIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + VR+ + K++ ++I+Q + F +E L
Sbjct: 177 ---PKEKQTLFFSATMPDTIISLTNSLLKNPVRISITPKSSTVDAIEQMVYFVEKKEKSL 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VL+F ++K A ++ L GI + IH + SQ R+ A+ +F++
Sbjct: 234 L-LVSILQKSEDQSVLVFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQLALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ ARG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIAARGIDINELPLVINYDLPDVPETYVHRI 332
>gi|294947712|ref|XP_002785456.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
gi|239899367|gb|EER17252.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
Length = 695
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 7/217 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI- 95
CDIL++TP RL + R ++ L +++ L+ DEAD++ ++G I +V+ PS
Sbjct: 339 GCDILVATPGRLSDLMERFRVSLCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSR 397
Query: 96 ---VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
++FSAT P +++LAR + D + + VGR + SIKQ + + E KL L
Sbjct: 398 DGRQSAMFSATFPREIQQLARDFLKDYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLY 456
Query: 153 QSFAESLNPPV-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ E + L+FV++K +A E+ L D A IH D SQ +RE A+ F++G+
Sbjct: 457 RVLEEQTEEGLTLVFVETKRKADEIENMLRRDRYPATSIHGDRSQWEREEALKAFKSGEL 516
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D VN VINYD P++ Y+HRI
Sbjct: 517 PILVATDVAARGLDISHVNLVINYDLPNNIDDYVHRI 553
>gi|168034811|ref|XP_001769905.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168034871|ref|XP_001769935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678811|gb|EDQ65265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678841|gb|EDQ65295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 582
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 145/267 (54%), Gaps = 29/267 (10%)
Query: 1 LATQTTRECK---KLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K + A+G + I + + + +I+++TP R +++
Sbjct: 220 LAQQIEKEVKAFCRSAEGFRTAIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNS 279
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL--------FSATLPDFVE 109
LSRV Y+VLDEAD++ ++G +P ++ ++RSL FSAT+P+ +E
Sbjct: 280 SLSRVSYVVLDEADRMLDMG-----FEPQIR-----EVMRSLPKKHQTLLFSATMPEEIE 329
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG--KLLAL-----RQSFAESLNPP 162
LA+ + + +RV VGR ++ + ++ Q L +E LLAL QS + PP
Sbjct: 330 ALAQEYLDNPIRVKVGRVSSPTANVTQNLEKITEKEKIESLLALLVDEHSQSLDTNQPPP 389
Query: 163 V-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIA 221
+ ++FV+ K R E+ L G++A +H SQ++RE A+ DFR G T +L+ATDV +
Sbjct: 390 LTIVFVERKARCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVAS 449
Query: 222 RGMDFKGVNCVINYDFPDSGAAYIHRI 248
RG+D GV VIN D P + Y+HRI
Sbjct: 450 RGLDVTGVAHVINLDLPKTMEDYVHRI 476
>gi|83593250|ref|YP_427002.1| DEAD/DEAH box helicase [Rhodospirillum rubrum ATCC 11170]
gi|386349984|ref|YP_006048232.1| DEAD/DEAH box helicase [Rhodospirillum rubrum F11]
gi|83576164|gb|ABC22715.1| DEAD/DEAH box helicase [Rhodospirillum rubrum ATCC 11170]
gi|346718420|gb|AEO48435.1| DEAD/DEAH box helicase [Rhodospirillum rubrum F11]
Length = 393
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 131/226 (57%), Gaps = 8/226 (3%)
Query: 26 ELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDP 85
+++R T + + +IL++TP RL+ + RK +DL +E LVLDEAD++ ++G P
Sbjct: 115 DILRQTRMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMG-----FAP 169
Query: 86 VVK--ACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG 142
VK A P ++ +FSATLP+ V L S+M+D VRV V + + I Q+++F
Sbjct: 170 AVKKIAAVLPRKRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVE 229
Query: 143 SEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENA 202
+ L L ++F ++K A +L L G+++ VIH + SQ R+ A
Sbjct: 230 QTNKRKLLLDLLGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRA 289
Query: 203 VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++DF++GK L+ATD+ ARG+D G+ VIN+D P+ +Y+HRI
Sbjct: 290 LNDFKSGKVRALVATDIAARGIDVDGITHVINFDLPNEPESYVHRI 335
>gi|10177293|dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 564
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 13/218 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 93
+I+I+TP RL + + +L RV YLVLDEAD++ ++G +P ++ + P
Sbjct: 261 GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-----FEPQIRKIVSQIRP 315
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEE--GKLLA 150
L+SAT P VE LAR + D + I+G + A++SI Q + + E +LL
Sbjct: 316 DRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLT 375
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + + +LIFV++K ++ +L DG A IH D +Q++R+ + +F++G+
Sbjct: 376 LLKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGR 433
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ++ ATDV ARG+D K + CV+NYDFP++ YIHRI
Sbjct: 434 SPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRI 471
>gi|37525462|ref|NP_928806.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784890|emb|CAE13804.1| ATP-dependent RNA helicase RhlE [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 434
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + +DLSRVE LVLDEAD++ ++G + I V+ P
Sbjct: 131 GVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMG-FIHDIRRVLNKLP-PKRQ 188
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQSF 155
LFSAT D ++ LA ++ D V V V R+N+ASE I+Q + F + +G+LL+
Sbjct: 189 NLLFSATFSDDIKSLASKLLRDPVSVEVARRNSASEQIEQLVHFVDKKRKGELLSF---L 245
Query: 156 AESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
S N VL+F ++K A L +L DG+ A IH + SQ R A+ DF+ G+ VL
Sbjct: 246 IGSRNWQQVLVFTRTKHGANRLAEQLNKDGVTASAIHGNKSQGARTRALADFKDGRIRVL 305
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 306 VATDIAARGLDIDQLPYVVNFELPNVAEDYVHRI 339
>gi|404319172|ref|ZP_10967105.1| DEAD/DEAH box helicase [Ochrobactrum anthropi CTS-325]
Length = 471
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + + ++K L+ + + + + + + D+LI+TP RL +R +D
Sbjct: 107 LAVQIEQTIRNVSKHAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVD 166
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + KA + +LFSAT+P + LA S++ D
Sbjct: 167 LSQTRWLVLDEADRMLDMG-FINDVKRIAKATHSDRQT-ALFSATMPKEIASLAGSLLRD 224
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V + T + I Q + ++E + L L + V++F ++K A +
Sbjct: 225 PVRVEVAPQGTTAAEITQVVHPVHTKEKRRL-LSALLGDKAMRSVIVFTRTKHGADAVVR 283
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L DG IH + SQ R+ A++ FR G +LIATD+ ARG+D G++ V+NYD P
Sbjct: 284 HLERDGYEVAAIHGNKSQNARQRALNGFRDGSLRILIATDIAARGIDVPGISHVVNYDLP 343
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 344 DEPETYVHRI 353
>gi|295085349|emb|CBK66872.1| Superfamily II DNA and RNA helicases [Bacteroides xylanisolvens
XB1A]
Length = 374
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
DL + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DLLRKGIDILVATPGRLLDLMSQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQVVYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
DL + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DLLRKGIDILVATPGRLLDLMTQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQVVYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|408377691|ref|ZP_11175292.1| ATP-dependent RNA helicase [Agrobacterium albertimagni AOL15]
gi|407748682|gb|EKF60197.1| ATP-dependent RNA helicase [Agrobacterium albertimagni AOL15]
Length = 469
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I R I L V YLVLDEAD++ ++G + L+ I +V P
Sbjct: 127 GTDILVATPGRLLDLIARNAISLRAVRYLVLDEADQMLDLGFIHDLRKISKMVP----PK 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA S + D ++V V A++ ++Q + F + K L++
Sbjct: 183 RQTLLFSATMPASIADLAASFLTDPLKVAVSPPGKAADKVEQHVHFVAGQNAKTEMLKKI 242
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ + ++F+++K A++L L G IH + SQ QRE A+ FR G+ L
Sbjct: 243 LNDNPDGRSIVFLRTKHGAEKLMKHLDATGYSVASIHGNKSQGQRERALKGFRDGEIKTL 302
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 303 IATDVAARGIDIPAVSHVFNYDLPEVPDAYVHRI 336
>gi|424885553|ref|ZP_18309164.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393177315|gb|EJC77356.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 593
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL + R+ I L+ V YLVLDEAD++ +
Sbjct: 162 NKQQLQLEK------------GTDVLVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLD 209
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V V V A++
Sbjct: 210 LGFVHDLRKIAKLVPKKRQ----TMLFSATMPKSIADLAGEYLVDPVTVEVTPPGKAADK 265
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F G + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 266 VEQYVHFVGGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLENIGYSVASIHGN 325
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 326 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 380
>gi|357013998|ref|ZP_09078997.1| DEAD/DEAH box helicase domain-containing protein, partial
[Paenibacillus elgii B69]
Length = 406
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 138/251 (54%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q T E K+ A KG + +++ R + + I+++TP RL +RR+ +
Sbjct: 84 LAIQITEEIKRWAPLKGLRVLSAYGGQDVERQIRKLEGNIHIIVATPGRLLDHLRRETVQ 143
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L ++ LVLDEAD++ +G L + ++ + S + LFSAT+P + +LA+ M
Sbjct: 144 LHKLSVLVLDEADQMLHMGFLPEVVEIISVTPSRRQTL--LFSATMPPRIRQLAKEYMRQ 201
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPV-LIFVQSKERAKELY 177
V + V K + I+Q +V ++ GKL L + E NP + +IF ++K RA +L
Sbjct: 202 PVEIEVKSKRVTLDEIEQ-VVIQTTDRGKLETLCKLIDEE-NPYLAMIFCRTKLRASKLM 259
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
ELA G +H DL+Q +RE + FR K +L+ATD+ ARG+D +G+ V NYD
Sbjct: 260 NELAERGYSCDELHGDLTQAKREQVMKRFREAKIQLLVATDIAARGLDVEGITHVFNYDI 319
Query: 238 PDSGAAYIHRI 248
P +YIHRI
Sbjct: 320 PHDAESYIHRI 330
>gi|42573778|ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
gi|108861888|sp|Q8W4R3.2|RH30_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 30
gi|110741550|dbj|BAE98724.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010323|gb|AED97706.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
Length = 591
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 128/218 (58%), Gaps = 13/218 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 93
+I+I+TP RL + + +L RV YLVLDEAD++ ++G +P ++ + P
Sbjct: 288 GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-----FEPQIRKIVSQIRP 342
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLA 150
L+SAT P VE LAR + D + I+G + A++SI Q ++V + +LL
Sbjct: 343 DRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLT 402
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + + +LIFV++K ++ +L DG A IH D +Q++R+ + +F++G+
Sbjct: 403 LLKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGR 460
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ++ ATDV ARG+D K + CV+NYDFP++ YIHRI
Sbjct: 461 SPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRI 498
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
DL + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DLLRKGIDILVATPGRLLDLMSQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQVVYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|366995463|ref|XP_003677495.1| hypothetical protein NCAS_0G02560 [Naumovozyma castellii CBS 4309]
gi|342303364|emb|CCC71143.1| hypothetical protein NCAS_0G02560 [Naumovozyma castellii CBS 4309]
Length = 556
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 145/257 (56%), Gaps = 15/257 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +EC K ++ + + + R DLS+ S +I+I+TP RL + K
Sbjct: 200 LAVQIQKECSKFGHSSRIRNTCVYGGVPRGQQIRDLSRGS-EIVIATPGRLIDMLEIGKT 258
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LA
Sbjct: 259 NLKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASD 313
Query: 115 IMHDAVRVIVGR-KNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
++D ++V +G + +AS +I Q ++V + +LL ++ ++ +LIF +K
Sbjct: 314 YLNDPIQVQIGSLELSASHNITQLVEVVSEFEKRDRLLKHLETASQDQESKILIFASTKR 373
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
E+ L DG A IH D Q +R+ +++FR+G++ +++ATDV ARG+D KG+N
Sbjct: 374 TCDEVTKYLREDGWPALAIHGDKDQRERDWVLEEFRSGRSPIMVATDVAARGIDVKGINY 433
Query: 232 VINYDFPDSGAAYIHRI 248
VINYD P + Y+HRI
Sbjct: 434 VINYDMPGNIEDYVHRI 450
>gi|424871855|ref|ZP_18295517.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393167556|gb|EJC67603.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 602
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 20/236 (8%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 162 NKQQLQLEK------------GTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLD 209
Query: 76 VG--NLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 132
+G + L+ I +V P ++ LFSAT+P + +LA + D V+V V A++
Sbjct: 210 LGFVHDLRKIAKMV-----PKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAAD 264
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHS 192
++Q + F + K LR+S E+ + ++F+++K A++L L G IH
Sbjct: 265 KVEQYVHFVAGKNDKTELLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHG 324
Query: 193 DLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 325 NKSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 380
>gi|262409233|ref|ZP_06085777.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645798|ref|ZP_06723482.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294809471|ref|ZP_06768175.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
gi|262352980|gb|EEZ02076.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638877|gb|EFF57211.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294443343|gb|EFG12106.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
Length = 374
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
DL + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DLLRKGIDILVATPGRLLDLMSQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIISLTKSLLKNPVKIYITPKSSTVDSIKQLVYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILSKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|157146569|ref|YP_001453888.1| ATP-dependent RNA helicase RhlE [Citrobacter koseri ATCC BAA-895]
gi|157083774|gb|ABV13452.1| hypothetical protein CKO_02330 [Citrobacter koseri ATCC BAA-895]
Length = 454
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L ++E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFI--HDIRRVLAKLPPK 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|288942468|ref|YP_003444708.1| DEAD/DEAH box helicase domain-containing protein [Allochromatium
vinosum DSM 180]
gi|288897840|gb|ADC63676.1| DEAD/DEAH box helicase domain protein [Allochromatium vinosum DSM
180]
Length = 438
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 5/223 (2%)
Query: 27 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPV 86
+V T + DIL++TP RL + + +DLS++E+ VLDEAD++ ++G + I V
Sbjct: 112 MVPQTTALRRGVDILVATPGRLLDHVGQGHVDLSKIEFFVLDEADRMLDMG-FIHDIRRV 170
Query: 87 VKACSNPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE 145
+K PS ++L FSAT +E+LA ++HD +R+ V +NTA+E++ Q +V + E
Sbjct: 171 LKLL--PSKRQNLLFSATYSREIEQLAIGLLHDPLRIEVAPRNTAAETVTQ-VVHPVARE 227
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
K L + VLIF ++K A L +L DGI A IH + SQ R A+ D
Sbjct: 228 AKRSLLSHLILQGDWQQVLIFTRTKHGANRLAEQLGRDGITAAAIHGNKSQGARTRALAD 287
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F++G L+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 288 FKSGALRALVATDIAARGLDIDRLPHVVNFELPNVPEDYVHRI 330
>gi|424896364|ref|ZP_18319938.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180591|gb|EJC80630.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 593
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL + R+ I L+ V YLVLDEAD++ +
Sbjct: 162 NKQQLQLEK------------GTDVLVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLD 209
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V V V A++
Sbjct: 210 LGFVHDLRKIAKLVPKKRQ----TMLFSATMPKSIADLAGEYLVDPVTVEVTPPGKAADK 265
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F G + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 266 VEQYVHFVGGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLENIGYSVASIHGN 325
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 326 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 380
>gi|3776029|emb|CAA09215.1| RNA helicase [Arabidopsis thaliana]
Length = 263
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 127/216 (58%), Gaps = 13/216 (6%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSI 95
+I+I+TP RL + + +L RV YLVLDEAD++ ++G +P ++ + P
Sbjct: 34 EIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-----FEPQIRKIVSQIRPDR 88
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEE--GKLLALR 152
L+SAT P VE LAR + D + I+G + A++SI Q + + E +LL L
Sbjct: 89 QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLL 148
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ + +LIFV++K ++ +L DG A IH D +Q++R+ + +F++G++
Sbjct: 149 KQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSP 206
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ ATDV ARG+D K + CV+NYDFP++ YIHRI
Sbjct: 207 IMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRI 242
>gi|374851362|dbj|BAL54324.1| DEAD/DEAH box helicase domain protein [uncultured Aquificae
bacterium]
Length = 365
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 2/216 (0%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
LSK +I+I TP R++ + R ++L V +LVLDEAD + ++G ++ I+ ++ A +
Sbjct: 115 LSKVVPNIVIGTPGRIKDLLSRGVLNLGNVSFLVLDEADLMLDMG-FVEDIESII-AYTP 172
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
LFSAT+P +E LAR + D + + I+++L+ S + K+ L
Sbjct: 173 KDRQTFLFSATIPKEIELLARKHLKDDYKFVRVISAELKPKIEERLIRLNSSKQKISELE 232
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ E L V+IFV++K+ A+++ EL G +H D++Q QRENA+ FR GK
Sbjct: 233 RILREHLLEKVIIFVRTKKDARDISQELKNRGFSVVSLHGDMTQRQRENALKLFREGKVK 292
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ATDV +RG+D KGV+ VINY P+ YIHRI
Sbjct: 293 TVVATDVASRGLDIKGVSLVINYQIPEDPEVYIHRI 328
>gi|430812755|emb|CCJ29835.1| unnamed protein product [Pneumocystis jirovecii]
Length = 631
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 4/214 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD+L +TP RL I R +I LS ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 294 CDMLTATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVEH 352
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + + K + L
Sbjct: 353 RQTLMFSATFPKDIQILARDFLKDYVFLSVGRVGSTSENITQKIEYVEDMDKKSVLLDIL 412
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ LIFV++K A L L A IH D +Q +RE A++ FR G+T ++
Sbjct: 413 HSMPRGGLTLIFVETKRMADTLSDFLLSSNFPATSIHGDRTQREREKALEMFRGGRTPIM 472
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 473 VATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 506
>gi|84499824|ref|ZP_00998112.1| DEAD/DEAH box helicase [Oceanicola batsensis HTCC2597]
gi|84392968|gb|EAQ05179.1| DEAD/DEAH box helicase [Oceanicola batsensis HTCC2597]
Length = 451
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 133/252 (52%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q + AKG ++ L+ + +++ + D+L++TP RL + R+ +
Sbjct: 86 LAKQIVENLQAYAKGTHMRVGLVVGGASINAQVNRLARGTDVLVATPGRLIDLLDRRAVT 145
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
LS+ +LVLDEAD++ ++G + L+ I ++ LFSAT+P + E+A S +
Sbjct: 146 LSQTRFLVLDEADQMLDLGFIHALRRIATLLPQTRQ----TMLFSATMPKLMAEIAGSYL 201
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKEL 176
D VRV ++ I+Q + F E L + A +P ++F ++K ++ L
Sbjct: 202 TDPVRVETAPPGKPADKIEQSVHFIAQGEKTALLIEHLDAHRADP-AIVFARTKHGSERL 260
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G A +H + SQ QR+ A+ +FR G+ VL+ATDV ARG+D G+ V NYD
Sbjct: 261 MKNLLAAGYAAVAVHGNKSQGQRDRAIREFREGEAMVLVATDVAARGIDIPGIRYVYNYD 320
Query: 237 FPDSGAAYIHRI 248
P+ Y+HRI
Sbjct: 321 LPNVADNYVHRI 332
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+++I+TP RL ++ K +
Sbjct: 304 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGRLIDLLKMKALK 363
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 364 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 418
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 419 LTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPWLLEKLPGMIDDGDVLVFASKKARVD 478
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ EL G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 479 EIEKELNQRGFRIAALHGDKDQASRMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVN 538
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 539 FDIAKEMDMHIHRI 552
>gi|401676603|ref|ZP_10808587.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. SST3]
gi|400216287|gb|EJO47189.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. SST3]
Length = 459
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|224539911|ref|ZP_03680450.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518465|gb|EEF87570.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FFDDIMQIVKYL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSRPADKIVQA--AYVCYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKMMKLNVGEMHSDLEQAQREEVMHEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|125555969|gb|EAZ01575.1| hypothetical protein OsI_23609 [Oryza sativa Indica Group]
Length = 442
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 12/223 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--S 94
DIL++TP RL + R K+ L ++YLV+DEAD++ ++G I +V+ + P S
Sbjct: 67 GADILVATPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMG-FEPQIRKIVERMNMPRKS 125
Query: 95 IVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK--LVFAGSEEGKLLAL 151
+ ++ LFSAT P ++ LA + + + + VGR ++++ I QK L+ G + G LL L
Sbjct: 126 VRQTMLFSATFPPEIQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDL 185
Query: 152 --RQSFAES----LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
RQS + P L+FV++K A L L G A IH D +Q +RE+A+
Sbjct: 186 LQRQSVGVANSKLQQPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRS 245
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+ G T +++ATDV +RG+D V VINYD P S Y+HRI
Sbjct: 246 FKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSVEDYVHRI 288
>gi|395243277|ref|ZP_10420264.1| ATP-dependent RNA helicase DeaD [Lactobacillus hominis CRBIP
24.179]
gi|394484507|emb|CCI81272.1| ATP-dependent RNA helicase DeaD [Lactobacillus hominis CRBIP
24.179]
Length = 489
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 138/251 (54%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +L + K +++++ ++ R K + IL+ TP RL ++RK ID
Sbjct: 81 LAIQTQEELFRLGRDEKARVQVVYGGADIRRQIHALKQTPAILVGTPGRLLDHLKRKTID 140
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+S+V+ +VLDEAD++ ++G ++ I+ ++K S+ LFSAT+P + ++ MHD
Sbjct: 141 ISQVKTIVLDEADEMLDMG-FIQDIESILKYASSKHQT-LLFSATMPKPIMHISEKFMHD 198
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPV-LIFVQSKERAKELY 177
V + K + I Q V A E + R + NP + ++F ++K R EL
Sbjct: 199 PEIVQIKGKELTANLIDQYFVRAKENEKFDILCR--LIDVQNPDLAVVFGRTKRRVDELT 256
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L G A IH DLSQ +R + + FR GK +L+ATDV ARG+D GV+ V NYD
Sbjct: 257 RGLQARGYNAAGIHGDLSQNKRMSVLKRFRKGKLDILVATDVAARGLDISGVSHVYNYDI 316
Query: 238 PDSGAAYIHRI 248
P +Y+HRI
Sbjct: 317 PQDPDSYVHRI 327
>gi|326481913|gb|EGE05923.1| ATP-dependent RNA helicase ROK1 [Trichophyton equinum CBS 127.97]
Length = 311
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 16/171 (9%)
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
S + L AT+ D + L+ +R++VG K++A +I KL +A +E+GKLL LRQ
Sbjct: 3 SNIEELAKATIGDRQKALSLKEESSLIRLVVGLKDSAIPNISHKLTYAATEQGKLLGLRQ 62
Query: 154 ---------SFAESLNPPVLIFVQSKERAKELYGELAFD-------GIRAGVIHSDLSQT 197
S + L PP ++F Q+ RA L+ EL +D R V+HS+LS +
Sbjct: 63 LLHPTTATASAGKHLRPPFIVFTQTIPRAVALHSELMYDIPPEAGGSSRIAVLHSELSDS 122
Query: 198 QRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
QR + + FR G+ W++I TD+++RG+DF+G+N V+NYD P+S AAY+HR+
Sbjct: 123 QRSDVMAGFRKGEIWIIITTDLLSRGVDFRGINGVVNYDIPNSAAAYVHRV 173
>gi|357384319|ref|YP_004899043.1| ATP-dependent RNA helicase RhlE [Pelagibacterium halotolerans B2]
gi|351592956|gb|AEQ51293.1| ATP-dependent RNA helicase RhlE [Pelagibacterium halotolerans B2]
Length = 473
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 131/250 (52%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
L Q + KG+ ++ + + T + + DI+++TP RL ++R+ I
Sbjct: 130 LVNQIAVNLRAFTKGSPIKVNSVVGGMSIGTQIKALAHGSDIVVATPGRLLDLVKRQAIR 189
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L ++LVLDEAD++ ++G + + + + P LFSAT+P + E+A + + D
Sbjct: 190 LDSAKHLVLDEADQMLDLG-FIHALREISRLVGTPRQTL-LFSATMPRQMNEIAATYLTD 247
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
VRV V A++ I Q F GKL L+Q A + L+F ++K A++L
Sbjct: 248 PVRVQVATPGKAADKIAQSAHFV-EPGGKLPLLKQLLAADADALSLVFARTKHGAEKLSK 306
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
LA G G IH + SQ QR+ + FR G+ VL+ATDV ARG+D GV+ V NY+ P
Sbjct: 307 TLAAAGFATGSIHGNKSQGQRDRTLKAFREGEIRVLVATDVAARGIDIPGVSHVYNYELP 366
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 367 QVAENYVHRI 376
>gi|310814605|ref|YP_003962569.1| DEAD/DEAH box helicase [Ketogulonicigenium vulgare Y25]
gi|385234913|ref|YP_005796255.1| DEAD/DEAH box helicase [Ketogulonicigenium vulgare WSH-001]
gi|308753340|gb|ADO41269.1| DEAD/DEAH box helicase domain protein [Ketogulonicigenium vulgare
Y25]
gi|343463824|gb|AEM42259.1| DEAD/DEAH box helicase domain protein [Ketogulonicigenium vulgare
WSH-001]
Length = 426
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 11/213 (5%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVR 97
IL++TP RL + RK IDLS+ E+LVLDEAD++ ++G + L+ I P++ A
Sbjct: 127 ILVATPGRLIDLLDRKAIDLSQTEFLVLDEADQMLDLGFIHALRRIAPLLPANRQ----T 182
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSF 155
LFSAT+P +EELA S + + +RV V A+ I Q + F S L+ L +
Sbjct: 183 MLFSATMPKQMEELAASFLSNPIRVQVNPPGQAATKITQSVHFVASRAKTDLLIELLDAH 242
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
+ L L+F ++K ++L +L G IH + SQ QR+ A+ DFRAG VL+
Sbjct: 243 RDEL---ALVFGRTKHGMEKLAKQLENAGYAVAAIHGNKSQGQRDRALRDFRAGTLRVLV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D V V NY+ P+ Y+HRI
Sbjct: 300 ATDVAARGLDIPDVRYVYNYELPNVPDNYVHRI 332
>gi|295101226|emb|CBK98771.1| Superfamily II DNA and RNA helicases [Faecalibacterium prausnitzii
L2-6]
Length = 648
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 9/216 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+ P RL I + IDLS +E VLDEAD++ ++G + + V+ P+
Sbjct: 123 GVDILIACPGRLNDLIGQGHIDLSNLEVFVLDEADRMLDMG-FVHDVKKVIAKL--PAKR 179
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT+P +E+LA I+HD V V ++ E I Q L F E+G L
Sbjct: 180 QNLMFSATMPKEIEQLAAGILHDPAFVKVDPVSSTVERIDQSLYFV--EKGNKKLLLPWL 237
Query: 156 AESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
++L PPV L+F ++K A ++ +L GI A IH + SQT R A++ F+ GKT
Sbjct: 238 IKNLTPPVQNALVFSRTKHGADKIARDLTKQGITAAAIHGNKSQTARVAALEGFKEGKTR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D ++ V NYD P+ Y+HRI
Sbjct: 298 VLVATDIAARGIDISELSHVFNYDLPEVPETYVHRI 333
>gi|255534886|ref|YP_003095257.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
gi|255341082|gb|ACU07195.1| ATP-dependent RNA helicase RhlE [Flavobacteriaceae bacterium
3519-10]
Length = 417
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL++TP RL I + I L +E VLDEAD++ ++G + + ++K P
Sbjct: 120 KKGVDILVATPGRLLDFISQGIISLKNLEIFVLDEADRMLDMG-FVHDVKRIIKLLP-PK 177
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
FSAT PD + +LA S++ + V+V V + +++IKQK+ F +E KL L
Sbjct: 178 RQTLFFSATFPDEISKLANSMLTNPVKVEVAPVSATADTIKQKVYFV-EKENKLELLTHI 236
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
++ VL+F ++K A ++ +L I A IH + SQ QR+NA+++F++GKT +L
Sbjct: 237 LMNDISDSVLVFSRTKHGADKIARKLQSHKISAEAIHGNKSQNQRQNALNNFKSGKTRIL 296
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + V+N++ D Y+HRI
Sbjct: 297 VATDIAARGIDIDELKYVVNFELSDVSETYVHRI 330
>gi|375085825|ref|ZP_09732447.1| hypothetical protein HMPREF9454_01058 [Megamonas funiformis YIT
11815]
gi|374566310|gb|EHR37555.1| hypothetical protein HMPREF9454_01058 [Megamonas funiformis YIT
11815]
Length = 529
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 139/251 (55%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGNKFQ-IKLMKKELV-RSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q E K+ K + + + + +++ R +F +++ TP RL IRR I
Sbjct: 86 LAIQIAEEFNKIGKYKRVKTLPVYGGQMIDRQIRALRFGVKVVVGTPGRLIDHIRRNTIK 145
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
L V+ L+LDEAD++ ++G ++ I+ ++ + ++L FSAT+P +E+LARS MH
Sbjct: 146 LDHVKMLILDEADEMLDMG-FIEDIEEIMSNVAQGENRQTLLFSATMPAPIEKLARSYMH 204
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ +V++ R+ S+ Q L F ++ + L +S +IF ++K+ +L
Sbjct: 205 NPQKVMISREQLTVPSVDQ-LYFETRDKFEGLCRVLDIEDSGK--YIIFCRTKKNVDDLQ 261
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L G AG +H D+SQ QR+ + FR GK +LIATDV ARG+D ++ VIN+D
Sbjct: 262 ASLQVRGYMAGSLHGDMSQAQRDRVMRRFREGKLEILIATDVAARGIDIDDISHVINFDI 321
Query: 238 PDSGAAYIHRI 248
P +Y+HRI
Sbjct: 322 PQDHESYVHRI 332
>gi|424882925|ref|ZP_18306557.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392519288|gb|EIW44020.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 605
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 20/236 (8%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 162 NKQQLQLEK------------GTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLD 209
Query: 76 VG--NLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 132
+G + L+ I +V P ++ LFSAT+P + +LA + D V+V V A++
Sbjct: 210 LGFVHDLRKIAKMV-----PKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAAD 264
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHS 192
++Q + F + K LR+S E+ + ++F+++K A++L L G IH
Sbjct: 265 KVEQYVHFVAGKNDKTELLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHG 324
Query: 193 DLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 325 NKSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 380
>gi|345298444|ref|YP_004827802.1| DEAD/DEAH box helicase [Enterobacter asburiae LF7a]
gi|345092381|gb|AEN64017.1| DEAD/DEAH box helicase domain protein [Enterobacter asburiae LF7a]
Length = 459
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +E LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L Q
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSQM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|344201906|ref|YP_004787049.1| DEAD/DEAH box helicase [Muricauda ruestringensis DSM 13258]
gi|343953828|gb|AEM69627.1| DEAD/DEAH box helicase domain protein [Muricauda ruestringensis DSM
13258]
Length = 384
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIK--LMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q E + L KG + + + R ++ + D+++ TP RL I R+ +
Sbjct: 120 LAQQVQSEFRSLTKGTRLTSACFIGGTNVGRDISSARGNLDLIVGTPGRLNDLIDRRALR 179
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
+ LVLDE D++ ++G +K I +V N LFSATL E+L + I
Sbjct: 180 IDTRSTLVLDEFDRMLDMG-FIKDIQKLVSGMRNRKQT-MLFSATLDPNQEKLIQQITGA 237
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
A RV V +S+++ Q ++ + E K L + ES VL+F ++K +L
Sbjct: 238 ATRVNVSSGTRSSDNVDQHIIRVKNSENKFDVLFKLVNESSFEKVLLFAETKRGVDKLSK 297
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
+L GIR+ VIH + SQ R A++ F++G T +L+ATDV ARG+D KGV VINY P
Sbjct: 298 QLKNSGIRSDVIHGNKSQNYRSRAIELFKSGSTKILVATDVAARGIDIKGVTHVINYQLP 357
Query: 239 DSGAAYIHRI 248
+ +YIHRI
Sbjct: 358 QTMDSYIHRI 367
>gi|326429718|gb|EGD75288.1| DEAD/H box polypeptide 3 [Salpingoeca sp. ATCC 50818]
Length = 710
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 136/258 (52%), Gaps = 16/258 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-SKF-----SCDILISTPLRLRLAIRR 54
LA+Q E +K A ++ K+ + TD S+F C +L++TP RL + R
Sbjct: 312 LASQIFAEARKFA----YRAKIRACCVYGGTDFRSQFRDLQRGCQVLVATPGRLVDLLER 367
Query: 55 KKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEE 110
+I + + +LVLDEAD++ ++G ++ I V + P VR +FSAT P ++
Sbjct: 368 GRIGMDAIRFLVLDEADRMLDMGFEPQIRRI--VEQDTMPPPGVRQTLMFSATFPKDIQV 425
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSK 170
LAR +HD V + VGR + +E+I QK+ + E + L A S VL+FV++K
Sbjct: 426 LARDFLHDCVSISVGRIGSTTENIFQKVYWVQEHEKRQTLLDLISAASEKELVLVFVETK 485
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
A L L A IH D +Q QRE A+ FR G T +L+AT V ARG+D V
Sbjct: 486 RGADALEDFLIHQQFPASSIHGDRTQEQRERALASFRDGYTPILVATAVAARGLDIPNVK 545
Query: 231 CVINYDFPDSGAAYIHRI 248
VIN+D P Y+HRI
Sbjct: 546 RVINFDLPSDIDEYVHRI 563
>gi|189425674|ref|YP_001952851.1| DEAD/DEAH box helicase [Geobacter lovleyi SZ]
gi|189421933|gb|ACD96331.1| DEAD/DEAH box helicase domain protein [Geobacter lovleyi SZ]
Length = 439
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
K +I+++ P RL I + IDL+ +E LVLDEAD++F++G +LKH+ P +
Sbjct: 118 KNGVEIVVACPGRLLDHINQGTIDLTNLELLVLDEADQMFDMGFLPDIRRILKHL-PAQR 176
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
LFSAT+P + LAR I+ D V V N A + ++ ++ K
Sbjct: 177 QTM-------LFSATMPAEIRGLAREILRDPATVQV--DNVAPAATVSHALYPVAQHLKT 227
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L Q + VLIF ++K RAK + +L G A + +LSQ +R+ A+D FR
Sbjct: 228 PLLMQLLKHTDTDSVLIFTRTKHRAKRVGEQLEKAGYTAASLQGNLSQNRRQAAMDGFRN 287
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G +L+ATD+ ARG+D V+ VINYD PD+ AYIHRI
Sbjct: 288 GTYQILVATDIAARGIDVSQVSHVINYDIPDTSEAYIHRI 327
>gi|323305025|gb|EGA58779.1| Dbp3p [Saccharomyces cerevisiae FostersB]
gi|323337602|gb|EGA78847.1| Dbp3p [Saccharomyces cerevisiae Vin13]
Length = 349
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 60 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 118
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 119 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 178
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 179 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 238
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 239 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 273
>gi|372270479|ref|ZP_09506527.1| ATP-dependent RNA helicase RhlE [Marinobacterium stanieri S30]
Length = 420
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
K DIL++TP RL +++KK+ L+++E LVLDEAD++ ++G LL ++ P K
Sbjct: 110 KRGADILVATPGRLLDMLKQKKLSLAQLEMLVLDEADRMLDLGFINDIRQLLGYM-PEQK 168
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
LFSATL VE LA +++ R+ V R+NTAS+ +KQ +A + K
Sbjct: 169 QTL-------LFSATLNGSVEALAEALLQQPERIQVARRNTASQQVKQS-AYAVTNADKT 220
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L+F ++K RA ++ EL +GI A IH D Q R A++ F
Sbjct: 221 DVLLYLIRGGNWQQTLVFTRTKRRADQVAEELQQEGISAVAIHGDRHQRDRLAALEAFTQ 280
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ VL+ATDV ARG+D + + V+NYD P+ AY+HRI
Sbjct: 281 GEASVLVATDVAARGLDIEALPQVVNYDLPNQPEAYVHRI 320
>gi|323348660|gb|EGA82903.1| Dbp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 290
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 60 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 118
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 119 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 178
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 179 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 238
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 239 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 273
>gi|302783318|ref|XP_002973432.1| hypothetical protein SELMODRAFT_52088 [Selaginella moellendorffii]
gi|300159185|gb|EFJ25806.1| hypothetical protein SELMODRAFT_52088 [Selaginella moellendorffii]
Length = 506
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 12/259 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
L++Q E KK A ++ ++ + L + DIL++TP RL ++R +I
Sbjct: 144 LSSQIHDEAKKFAYQTGVKVVVIYGGTSVQSQLKELERGVDILVATPGRLDDLMQRGRIS 203
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
LS V YL LDEAD++ ++G I +V+ P + LFSAT P ++ LA
Sbjct: 204 LSLVRYLALDEADRMLDMG-FEPQIRKIVENTDMPPAGQRQTMLFSATFPREIQRLAADF 262
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN------PPVLIFVQS 169
+++ + + VGR ++++ I Q++ + + + + + A+ N P +L+FV++
Sbjct: 263 LYNYIFLAVGRVGSSTDLIVQRVEYVHDVDKRSMLMDMIHAQKPNGLNGQLPLILVFVET 322
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
K A L L GI A IH D +Q +RE+A+ FR G T +L+ATDV ARG+D V
Sbjct: 323 KRGADSLEDWLIQMGISATTIHGDRTQVEREHALRSFRTGVTPILVATDVAARGLDIPHV 382
Query: 230 NCVINYDFPDSGAAYIHRI 248
VINYD P Y+HRI
Sbjct: 383 AHVINYDLPSDIDDYVHRI 401
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL I+ K +
Sbjct: 311 LAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIKMKALT 370
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE+LAR I
Sbjct: 371 MLRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 425
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D VRV VG A+E I Q + S+ KL L ++ VL+F K
Sbjct: 426 LTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGMIDDGDVLVFASKKATVD 485
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G++ +H D Q R + + F++G VLIATDV ARG+D K + V+N
Sbjct: 486 EIESQLGQKGLKIAALHGDKDQASRMDILQKFKSGIYHVLIATDVAARGLDIKSIKSVVN 545
Query: 235 YDFPDSGAAYIHRI 248
+D A++HRI
Sbjct: 546 FDIARDMDAHVHRI 559
>gi|308186129|ref|YP_003930260.1| ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
gi|308056639|gb|ADO08811.1| Putative ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
Length = 456
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL ++ +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + + V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|241205862|ref|YP_002976958.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859752|gb|ACS57419.1| DEAD/DEAH box helicase domain protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 580
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 20/236 (8%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K DIL++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 137 NKQQLQLEK------------GTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLD 184
Query: 76 VG--NLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASE 132
+G + L+ I +V P ++ LFSAT+P + +LA + D V+V V A++
Sbjct: 185 LGFVHDLRKIAKMV-----PKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAAD 239
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHS 192
++Q + F + K LR+S E+ + ++F+++K A++L L G IH
Sbjct: 240 KVEQYVHFVAGKNDKTELLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHG 299
Query: 193 DLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 300 NKSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 355
>gi|209550473|ref|YP_002282390.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536229|gb|ACI56164.1| DEAD/DEAH box helicase domain protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 567
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDVLVATPGRLLDLINRRAISLTTVRYLVLDEADQMLD 163
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V+V V A++
Sbjct: 164 LGFVHDLRKIAKMVPKKRQ----TMLFSATMPKAIADLAGDYLVDPVKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 220 VEQYVHFVAGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLENIGYSVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 334
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D+L++TP RL + + + L +E VLDEAD++ ++G + + V+KA P
Sbjct: 124 GVDVLVATPGRLLDLMEQGFVSLRSLEVFVLDEADRMLDMG-FIHDVRRVIKALP-PKRQ 181
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSATLP + +LARSI+ D +RV V ++ +E++ Q++ F E+ + L L
Sbjct: 182 TLFFSATLPPDIVDLARSILTDPIRVEVTPASSTAETVSQQVYFVEREQKRGL-LTHLLK 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E L+F ++K A + +L G+ + IH + SQ RE A+D+FR+G VL+A
Sbjct: 241 EGNIHRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D G++ V+NYD P+ Y+HRI
Sbjct: 301 TDIAARGIDIDGLSYVVNYDLPNVPEQYVHRI 332
>gi|238917309|ref|YP_002930826.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
gi|238872669|gb|ACR72379.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
Length = 571
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 136/254 (53%), Gaps = 12/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK----KELVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA Q E +KLAK IK++ +E+VR K I++ TP R+ +RRK
Sbjct: 81 LAVQVAEEIRKLAK-YMSDIKVLPVYGGQEIVRQIKSLKAGVQIIVGTPGRVMDHMRRKT 139
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSI 115
+ V ++LDEAD++ ++G + ++ ++ P ++ LFSAT+P + E+AR
Sbjct: 140 VKFDSVSMVILDEADEMLDMG-FREDMETIL--TETPEERQTVLFSATMPKPIMEIARKF 196
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPV-LIFVQSKERAK 174
DA + V RK +I Q + + K L + + NP + ++F +K +
Sbjct: 197 QKDARIIKVVRKELTVSNIDQ-FYYEVRPKNKTEILSR-LIDIYNPKLSVVFCNTKRQVD 254
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
EL EL G A IH D+ Q QR+ +DDFR+GKT +LIATDV ARG+D GV+ V N
Sbjct: 255 ELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEILIATDVAARGIDVDGVDIVFN 314
Query: 235 YDFPDSGAAYIHRI 248
YD P Y+HRI
Sbjct: 315 YDLPQDEEYYVHRI 328
>gi|206579391|ref|YP_002239559.1| ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae 342]
gi|290510541|ref|ZP_06549911.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
gi|206568449|gb|ACI10225.1| putative ATP-dependent RNA helicase RhlE [Klebsiella pneumoniae
342]
gi|289777257|gb|EFD85255.1| ATP-dependent RNA helicase RhlE [Klebsiella sp. 1_1_55]
Length = 451
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|188996905|ref|YP_001931156.1| DEAD/DEAH box helicase domain-containing protein
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931972|gb|ACD66602.1| DEAD/DEAH box helicase domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 405
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILI-STPLRLRLAIRRKKI 57
LA Q +E K+L K K + K + + K D+++ TP R+R + R +
Sbjct: 86 LAIQVAKEIKELGKNKKVYTLAVYGGKSISHQINFLKKGSDVVVVGTPGRVRDLLERGVL 145
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSI 115
+L V+ VLDEAD++ E+G ID + + S R LFSAT+P + +LA
Sbjct: 146 NLDNVKMFVLDEADRMLEMG----FIDDIEEIMSYLPEDRQNLLFSATMPKEILDLAEEF 201
Query: 116 MHDAVRVI-VGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+++ I V E IKQ +++ + K L + +++ V+IF Q+K A
Sbjct: 202 LNENYETIRVKPDEVTVEKIKQ-IIYRVNPRDKFKKLTEVLSQNEAEKVIIFTQTKIEAD 260
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
EL L +G A IH D SQ +RE + +FR GK +L+ATDV ARG+D KGV+ VIN
Sbjct: 261 ELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDIKGVDLVIN 320
Query: 235 YDFPDSGAAYIHRI 248
Y P +YIHRI
Sbjct: 321 YGLPRDAESYIHRI 334
>gi|424918576|ref|ZP_18341940.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854752|gb|EJB07273.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 567
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL I R+ I L+ V YLVLDEAD++ +
Sbjct: 116 NKQQLQLEK------------GTDVLVATPGRLLDLINRRAISLTTVRYLVLDEADQMLD 163
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V+V V A++
Sbjct: 164 LGFVHDLRKIAKMVPKKRQ----TMLFSATMPKAIADLAGDYLVDPVKVEVTPPGKAADK 219
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 220 VEQYVHFVAGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLENIGYSVASIHGN 279
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 280 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 334
>gi|307720922|ref|YP_003892062.1| DEAD/DEAH box helicase [Sulfurimonas autotrophica DSM 16294]
gi|306979015|gb|ADN09050.1| DEAD/DEAH box helicase domain protein [Sulfurimonas autotrophica
DSM 16294]
Length = 417
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DI+I+TP RL I +K IDL VEYL+LDEAD++ ++G + I ++ N
Sbjct: 128 GTDIVIATPGRLLDHISQKTIDLREVEYLILDEADRMLDMG-FINDIKKILNIIPNQRQT 186
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT D +++L+ ++ + V R NT+SE +KQ + + L L
Sbjct: 187 L-LFSATYSDAIKKLSNQFLNAPKLIEVARANTSSEIVKQAVYHVDKTRKREL-LTHLIN 244
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E VL+F ++K A L G+L DGI A IH + SQ R A+ DF+ G VL+A
Sbjct: 245 EGKWQQVLVFTRTKHGANRLSGQLESDGITAVAIHGNKSQNARTKALADFKKGDVRVLVA 304
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D + VINY+ P+ Y+HRI
Sbjct: 305 TDIAARGIDIDQLPHVINYELPNVSEDYVHRI 336
>gi|209694846|ref|YP_002262774.1| helicase (DEAD/DEAH box helicase) [Aliivibrio salmonicida LFI1238]
gi|208008797|emb|CAQ78997.1| putative helicase (DEAD/DEAH box helicase) [Aliivibrio salmonicida
LFI1238]
Length = 434
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSI 95
DIL++TP RL+ I + ++ +E+LV DEAD++ ++G N +++I +++ S P I
Sbjct: 125 VDILVATPGRLQEHIEEGNVSIANLEFLVFDEADRMLDMGFVNAIRNI--MMEVNSAPQI 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ R+ V R+N + +I +V+ EE K L +
Sbjct: 183 M--LFSATSSAQMNKLASDILRKPKRISVDRENMTATTISH-VVYPVDEERKTELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A + EL DGI+A + H D +Q+ R A+++F+ GK V++
Sbjct: 240 GRKNWQQVLVFVNYKETANNIVKELKLDGIKAVICHGDKAQSARRRALEEFKEGKARVMV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + VINYD P Y+HRI
Sbjct: 300 ATDVAARGLDIADLPHVINYDMPFLAEDYVHRI 332
>gi|91206539|sp|Q59LU0.2|DBP2_CANAL RecName: Full=ATP-dependent RNA helicase DBP2
Length = 562
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 132/256 (51%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q EC K K ++ + + + + + +I I+TP RL + K +
Sbjct: 212 LAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTN 271
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++L R
Sbjct: 272 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDY 326
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP---VLIFVQSKER 172
++D ++V +G A+ +LV E K L + +LN +L+F +K
Sbjct: 327 LNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRT 386
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +D+FR GKT +++ATDV ARG+D KG+ V
Sbjct: 387 CDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHV 446
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 447 INYDMPGNIEDYVHRI 462
>gi|347735337|ref|ZP_08868231.1| ATP-dependent RNA helicase RhlE [Azospirillum amazonense Y2]
gi|346921472|gb|EGY02178.1| ATP-dependent RNA helicase RhlE [Azospirillum amazonense Y2]
Length = 387
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + + + L +VE LVLDEAD++ ++G + + K +N +
Sbjct: 125 GIDILVATPGRLLDLMTQGHVRLDKVEVLVLDEADRMLDMGFIHSLRKIMAKLPANRQTL 184
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT+P V ELA ++ D +RV V +T +E I+QK++F + E + + +
Sbjct: 185 --FFSATMPADVSELAGKMLRDPLRVEVTPVSTTAERIEQKVIFVPAAEKRHVLVDLIRG 242
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
++ ++F ++K A + +L GI A IH + SQ R+ A+D FRAG VL+A
Sbjct: 243 DAGMQRSIVFTRTKHGANRVSAQLEQAGIEAAAIHGNKSQNARQKALDGFRAGTVRVLVA 302
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D GV V+N++ P+ Y+HRI
Sbjct: 303 TDIAARGIDVDGVTHVVNFELPNEPETYVHRI 334
>gi|237730773|ref|ZP_04561254.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. 30_2]
gi|226906312|gb|EEH92230.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. 30_2]
Length = 448
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 TKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|217968880|ref|YP_002354114.1| DEAD/DEAH box helicase [Thauera sp. MZ1T]
gi|217506207|gb|ACK53218.1| DEAD/DEAH box helicase domain protein [Thauera sp. MZ1T]
Length = 441
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD++++TP RL + R+KI LS VE L+LDEAD++ ++G + ID +V A P+ +
Sbjct: 125 CDVVVATPGRLLDHLTRRKIKLSDVEVLILDEADRMLDMG-FAEDIDAIVAAT--PAKRQ 181
Query: 98 SL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+L FSATL V +A + DA R+ + I+Q+L+FA K L
Sbjct: 182 TLLFSATLDGVVGSMATRMTRDAERIEIEVAQEDRGQIEQRLMFADDLGHKSRLLHALLG 241
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E ++F +K A EL L GI A +H D+ QTQR +D R G+ VL+A
Sbjct: 242 EDGMNQAVVFTATKRSADELSLALQEKGISAAALHGDMHQTQRNRTLDRLRQGRIGVLVA 301
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D G++ VIN+D P Y+HRI
Sbjct: 302 TDVAARGIDVAGISHVINFDPPRQAEDYVHRI 333
>gi|401625757|gb|EJS43750.1| dbp3p [Saccharomyces arboricola H-6]
Length = 517
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 228 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 286
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ +RV +G + TA++ I Q ++V +E KLL L + +
Sbjct: 287 FTATWPKEVRELASTFMNNPIRVSIGNTDQLTANKKITQIVEVVDPRGKERKLLELLKKY 346
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK +
Sbjct: 347 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYSVAAIHGDLSQQQRTQALNEFKSGKCNL 406
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 407 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 441
>gi|164655062|ref|XP_001728662.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
gi|159102545|gb|EDP41448.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
Length = 623
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 137/254 (53%), Gaps = 12/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS------CDILISTPLRLRLAIRR 54
LA Q E +K A + QI+++ LV DL + + +I+I+TP RL+ + R
Sbjct: 315 LALQIEAETRKFAA--RLQIQVVS--LVGGRDLGEQAFHLNDGAEIVIATPGRLQDCLER 370
Query: 55 KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARS 114
+ L + YLV+DEAD++ ++ N + + ++ + + L+SAT+P V+++AR+
Sbjct: 371 HMLVLGQCHYLVMDEADRMVDM-NYEEALHYILDSLPT-TRTTMLYSATMPPTVDKIART 428
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ V V +G+ A +I+Q + F SEE + L PP+++FV K A
Sbjct: 429 YLTRPVTVTIGQAGQAVGTIEQCVEFVDSEEDRQQRLLHVLDSGFAPPMIVFVNQKANAD 488
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+ +L G V+HS LSQ QRE A+ R G VL TD+ ARG+D V+ V+N
Sbjct: 489 LVGKDLRRAGWNVAVLHSGLSQPQREAAIASLRDGYNEVLCCTDIGARGIDLPDVSLVVN 548
Query: 235 YDFPDSGAAYIHRI 248
Y FP A+YIHRI
Sbjct: 549 YQFPTQFASYIHRI 562
>gi|404252262|ref|ZP_10956230.1| DEAD/DEAH box helicase [Sphingomonas sp. PAMC 26621]
Length = 366
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 6/218 (2%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
D+S+ DIL++TP RL I ++ + L+ +E LVLDEAD++ ++G + + +VK
Sbjct: 125 DMSR-GVDILVATPGRLLDLIEQRMVSLAMLEILVLDEADQMLDLG-FIHALRKIVKML- 181
Query: 92 NPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
P + ++LF SAT+P+ + ELA ++D V V ++ +E ++Q + F E + L
Sbjct: 182 -PRVRQTLFFSATMPNAIRELADQFLNDPATVKVAPVSSTAERVEQYVYFVNQGEKQAL- 239
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L A+ L+F ++K A + L +GI A IH + SQ QRE A+ +F+ GK
Sbjct: 240 LTMLLADGAIERCLVFTRTKHGADRVVKLLGANGIPANAIHGNKSQPQRERALGEFKTGK 299
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D GV+ V N++ P+ Y+HRI
Sbjct: 300 VKVLVATDIAARGIDVSGVSHVFNFELPNVAEQYVHRI 337
>gi|380004252|gb|AFD28589.1| vasa protein, partial [Clytia hemisphaerica]
Length = 488
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 132/253 (52%), Gaps = 7/253 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LATQ E +K + G + ++ + + L + C +LI TP RL+ + R+KI
Sbjct: 131 LATQIFNEARKFSHGTSIRPVVVYGGVSVAHQLRQVEAGCHLLIGTPGRLKDFMGRRKIT 190
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
L ++YLVLDEAD++ ++G + + +V + P +FSAT P+ +++LA
Sbjct: 191 LENLKYLVLDEADRMLDMG-FMPDVKTIVSDFNMPEKEERHTLMFSATFPEQIQKLASDF 249
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
++ V + +G+ + I+QK+V + GK L L+FVQ+K A
Sbjct: 250 LNQYVFITIGKIGSTHSGIEQKVVEI-EDSGKRDRLVDILGNEGTNRNLVFVQTKRLADF 308
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L L +G IH D Q QRE A+ +F+ G+ VLIAT V ARG+D V VINY
Sbjct: 309 LASYLCQNGFPTTSIHGDRYQQQREEALREFKRGEQTVLIATQVAARGLDIADVKQVINY 368
Query: 236 DFPDSGAAYIHRI 248
D PD YIHRI
Sbjct: 369 DLPDEIEEYIHRI 381
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL I+ K +
Sbjct: 311 LAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIKMKALT 370
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE+LAR I
Sbjct: 371 MLRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 425
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D VRV VG A+E I Q + S+ KL L ++ VL+F K
Sbjct: 426 LTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGMIDDGDVLVFASKKATVD 485
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G++ +H D Q R + + F++G VLIATDV ARG+D K + V+N
Sbjct: 486 EIESQLGQKGLKIAALHGDKDQASRMDILQKFKSGIYHVLIATDVAARGLDIKSIKSVVN 545
Query: 235 YDFPDSGAAYIHRI 248
+D A++HRI
Sbjct: 546 FDIARDMDAHVHRI 559
>gi|423302506|ref|ZP_17280528.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
gi|408470382|gb|EKJ88916.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
Length = 374
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 131/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L+ +EY VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGYIHLTNIEYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDSIIALTKSLLKNPVKIYITPKSSTVDSIKQIIYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L ++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILQKAEDQSVLIFSRTKHNADKIVRILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTKVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 131/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL ++ K +
Sbjct: 304 LAHQIYLEAKKFAKPYNLRVAAIYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK 363
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 364 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 418
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG+ A+E IKQ + S+ K+ L ++ VL+F K R
Sbjct: 419 LTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPWLLGKLPGMIDDGDVLVFASKKARVD 478
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ EL G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 479 EIEKELNQRGFRIAALHGDKDQASRMETLQKFKSGTFHVLVATDVAARGLDIKSIKTVVN 538
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 539 FDIAKEMDMHIHRI 552
>gi|288936404|ref|YP_003440463.1| DEAD/DEAH box helicase [Klebsiella variicola At-22]
gi|288891113|gb|ADC59431.1| DEAD/DEAH box helicase domain protein [Klebsiella variicola At-22]
Length = 451
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + + L VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE I Q + F + L L
Sbjct: 179 ARRQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|301120023|ref|XP_002907739.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106251|gb|EEY64303.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 639
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 7/215 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R +I LS + +L+LDEAD++ ++G I +V+ P
Sbjct: 296 GCDLLVATPGRLVDLMERGRISLSCIRFLILDEADRMLDMG-FEPQIRRIVEQEDMPRER 354
Query: 97 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF--AGSEEGKLLALRQ 153
++ +FSAT P ++ LA + D + + VGR +AS+ +KQ + + +E L+
Sbjct: 355 QTFMFSATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLN 414
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ L +L+FV++K A L L +G A IH D SQ +RE A+ F++G+T V
Sbjct: 415 QVQDGL---ILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPV 471
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D GV VIN+D P++ Y+HRI
Sbjct: 472 LVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRI 506
>gi|308050752|ref|YP_003914318.1| DEAD/DEAH box helicase [Ferrimonas balearica DSM 9799]
gi|307632942|gb|ADN77244.1| DEAD/DEAH box helicase domain protein [Ferrimonas balearica DSM
9799]
Length = 426
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL+ + + L++VEYLVLDEAD++ ++G + I + P
Sbjct: 124 GVDILVATPGRLQELMEMNMVSLAQVEYLVLDEADRMLDMG-FIGDIQRIRDQIKLPHQT 182
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT P +++LA ++ V VG +N +E++ + + E+ K+ L +
Sbjct: 183 -MLFSATYPPKMKQLAAELLKKPKMVSVGEENRTAETVAH-VFYPVDEDRKIELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A + EL DG+ GV H D SQ R A+ +F+ GK VL+A
Sbjct: 241 RKNWQQVLVFVNYKEHADAIAEELNNDGLTTGVCHGDRSQGNRRRALKEFKEGKLRVLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D +G+ V+NYD P Y+HRI
Sbjct: 301 TDVAARGLDIQGLPHVVNYDLPFLAEDYVHRI 332
>gi|297797303|ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
gi|297312371|gb|EFH42795.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 13/218 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---P 93
+I+I+TP RL + + +L RV YLVLDEAD++ ++G +P ++ + P
Sbjct: 285 GVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG-----FEPQIRKIVSQIRP 339
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLA 150
L+SAT P VE LAR + D + I+G + A++SI Q ++V + +LL
Sbjct: 340 DRQTLLWSATWPREVESLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLT 399
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + + +LIFV++K ++ +L DG A IH D +Q +R+ + +F++G+
Sbjct: 400 LLKQLMDGSK--ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQPERDRVLAEFKSGR 457
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ ++ ATDV ARG+D K + CV+NYDFP++ YIHRI
Sbjct: 458 SPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRI 495
>gi|71027181|ref|XP_763234.1| RNA helicase [Theileria parva strain Muguga]
gi|68350187|gb|EAN30951.1| RNA helicase, putative [Theileria parva]
Length = 476
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 146/254 (57%), Gaps = 14/254 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRK--KID 58
L Q E L G F IK ++K ++++F+ I I+TPL L + K D
Sbjct: 147 LVQQVKSEFIYLTGGEIFSIKALEK------NMTEFNFSIAITTPLTLYTLLHNNALKTD 200
Query: 59 LSR-VEYLVLDEADKLFE--VGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
L R ++ LVLDE DKL E G +++I ++K I ++ FS+TL V L++S
Sbjct: 201 LMRGLKCLVLDECDKLLEEGYGENIEYIMNLIKDFK--GIQKASFSSTLQSEVLLLSKSH 258
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
++ + + +G++N +++Q+L+ +++GKLL L+Q + L PP+L+F+QS R
Sbjct: 259 FNNPIHITIGKENVCCCNVEQELICVTNDKGKLLILKQLINDGKLLPPILVFLQSINRVN 318
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+LY EL+ + L+ QR+N + FR G+ W+L+ TD++ RG++FKGV+ ++N
Sbjct: 319 DLYNELSQLNLNVQKFTKQLTLKQRQNIIQKFRIGQIWILLCTDILCRGINFKGVHSIVN 378
Query: 235 YDFPDSGAAYIHRI 248
YD P + YI+R+
Sbjct: 379 YDLPLTPQVYINRV 392
>gi|330793454|ref|XP_003284799.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
gi|325085293|gb|EGC38703.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
Length = 558
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 4/209 (1%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL +++KKI+ + +YL LDEAD+L + G I V+ +N L
Sbjct: 244 MIVATPGRLLELLQKKKINFNLCKYLGLDEADRLIDFG-FEDDIRSVLDHFTNQRQT-LL 301
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL 159
FSAT+P ++E ARS + V V VGR A+ ++ Q++ F E K++ L + ++
Sbjct: 302 FSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPEAKIVYLLECLQKT- 359
Query: 160 NPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDV 219
PPVLIF ++K+ ++Y L + A IH D SQ +RE A+ FR GK VL+ATDV
Sbjct: 360 PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQEEREGAIKAFREGKKDVLVATDV 419
Query: 220 IARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++G+DF + VIN+D P YIHRI
Sbjct: 420 ASKGLDFPDIQHVINFDMPREIENYIHRI 448
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+I+TP RL ++ K +
Sbjct: 316 LAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK 375
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 376 MFRATYLVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 430
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 431 LTDPIRVTVGQVGSANEDIKQVVNVLLSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVD 490
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G R +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 491 EIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVN 550
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 551 FDIAKEMDMHIHRI 564
>gi|408672235|ref|YP_006871983.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
gi|387853859|gb|AFK01956.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
17448]
Length = 414
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 142/251 (56%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q T+ +K+AKG K + + + ++ + K DILI+TP R+ I +K +
Sbjct: 87 LALQITQVFQKMAKGTKVETLCLFGGVEQAPQVEKIEKGVDILIATPGRMFDLIYQKHLK 146
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLF-SATLPDFVEELARSIMH 117
++ VE LVLDEAD + ++G +K I V K P ++LF SAT+ + ++++A S++
Sbjct: 147 ITGVEILVLDEADHMLDLG-FIKDIHDVKKFL--PKFHQTLFFSATINEQIKKIAYSLVR 203
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ +R+ + K+ S++I + F ++ + L + E+ +L+FV++K RA+ +
Sbjct: 204 NPIRIQISPKDPVSKNITHSVAFVEMDDKRFF-LERVVNENPESKILVFVRTKVRAERVK 262
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
+ GI + IH D Q R +D FR + +LIATDV ARG+D V+ V+NYD
Sbjct: 263 AAMQRVGIESETIHGDKEQENRLEVLDKFRNSEVKILIATDVTARGIDIADVDYVVNYDL 322
Query: 238 PDSGAAYIHRI 248
PD Y+HR+
Sbjct: 323 PDVPENYVHRV 333
>gi|402847520|ref|ZP_10895803.1| DEAD/DEAH box helicase [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402266180|gb|EJU15625.1| DEAD/DEAH box helicase [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 460
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 10/216 (4%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSN 92
+I+I+TP RL + ++ DLS V Y VLDEAD++ ++G ++++ + K C
Sbjct: 124 LGAEIVIATPGRLLALMNLQQADLSGVTYFVLDEADRMLDMGFQEDIMQINSALPKGCQ- 182
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R +FSAT+P +++ AR+I+H+ V + + ESI Q + E KL L
Sbjct: 183 ----RVMFSATMPPKIKKFARTILHNPAEVELA-ISRPPESIVQS-AYVCYERQKLPILT 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q F E+ +IF SK + KEL L+ IR +HSDL+Q +RE + +F++G
Sbjct: 237 QLFRETPPTRTIIFSSSKLKVKELTAALSRLSIRVEQMHSDLTQEKREEVMKNFKSGNID 296
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV+ARG+D + VINYD P Y+HRI
Sbjct: 297 LLVATDVVARGIDIDNIRMVINYDIPHDPEDYVHRI 332
>gi|394988591|ref|ZP_10381426.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
gi|393791970|dbj|GAB71065.1| hypothetical protein SCD_00993 [Sulfuricella denitrificans skB26]
Length = 476
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSN 92
K +IL++TP RL + +K ++LS+VE LVLDEAD++ ++G L +K I ++ A
Sbjct: 125 KGGVEILVATPGRLLDHVEQKTVNLSKVEILVLDEADRMLDMGFLPDIKRIIALLPAKRQ 184
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
LFSAT +++L+ ++ D V + V R+N ASE++ Q + E + L
Sbjct: 185 ----NLLFSATFAGEIKKLSDQLLTDPVLIEVARRNAASENVTQVIYPVDHERKRELLAH 240
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+E+L VL+F ++K A L +L DGI A IH D SQ QR A+ +F+ G
Sbjct: 241 LIKSENLQQ-VLVFSRTKHGASRLAQQLEKDGISATAIHGDKSQQQRTQALAEFKDGTVR 299
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATDV ARG+D + V+N+D P++ Y+HRI
Sbjct: 300 VLVATDVAARGLDIDQLPHVVNFDLPNAPEDYVHRI 335
>gi|149372587|ref|ZP_01891699.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[unidentified eubacterium SCB49]
gi|149354630|gb|EDM43194.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[unidentified eubacterium SCB49]
Length = 626
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K I+++TP R++ I R+ ID+S++EY VLDEAD++ +G H D + + S+
Sbjct: 120 KKGAQIIVATPGRMKDMISRRMIDISKIEYCVLDEADEMLNMGF---HED-ITEILSHSP 175
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
+S LFSAT+P V +A+ M+ + VG KNT SE++ + + + + AL+
Sbjct: 176 QEKSTWLFSATMPREVASIAKEFMYQPQEITVGSKNTGSENVTHEYYLVNARD-RYQALK 234
Query: 153 QSFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ A++ NP + ++F ++K +++ +L DG AG IH DLSQ QR+ + FR+ +
Sbjct: 235 R-LADA-NPEIFSVVFCRTKRDTQKVAEQLIQDGYSAGAIHGDLSQNQRDIVMKQFRSRQ 292
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+++ATDV ARG+D + VINY PD Y HR
Sbjct: 293 IQMMVATDVAARGIDVDNITHVINYQLPDEVETYTHR 329
>gi|302384214|ref|YP_003820037.1| DEAD/DEAH box helicase [Brevundimonas subvibrioides ATCC 15264]
gi|302194842|gb|ADL02414.1| DEAD/DEAH box helicase domain protein [Brevundimonas subvibrioides
ATCC 15264]
Length = 528
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 130/215 (60%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 95
D+L++TP RL +++K +DLS E VLDEAD++ ++G + P+ + S P+
Sbjct: 138 GLDVLVATPGRLLDHMQQKTLDLSSTEIFVLDEADQMLDLG----FVKPIRQIVSRIPAK 193
Query: 96 VRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-RQ 153
++LF SAT+P + +LA ++ + V+V V ++T E I Q ++ E+G+ AL +
Sbjct: 194 RQNLFFSATMPTEIGKLAGELLKEPVKVQVTPQSTTVERINQSVIHV--EQGRKRALLTE 251
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
FA+ L+F ++K A ++ L G++AG IH + SQ QRE + F+AGK V
Sbjct: 252 MFADDNFTRCLVFTKTKHGADKVAAYLEAGGVQAGAIHGNKSQPQRERTLAAFKAGKLRV 311
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D GV+ V+N++ P AY+HRI
Sbjct: 312 LVATDIAARGIDVDGVSHVVNFELPFVPEAYVHRI 346
>gi|374290252|ref|YP_005037305.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
gi|358377044|gb|AEU09232.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Blattabacterium
sp. (Cryptocercus punctulatus) str. Cpu]
Length = 550
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 132/232 (56%), Gaps = 20/232 (8%)
Query: 19 QIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGN 78
QI+L+KK S I++ TP R+ IRR K+ LS ++YL+LDEAD++ +G
Sbjct: 116 QIQLLKK-----------SNHIIVGTPGRIIDLIRRNKLYLSNIKYLILDEADEMLNMG- 163
Query: 79 LLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK 137
+ +D ++ P +SL FSAT+ ++ +A S + + +I G++N S+ +K
Sbjct: 164 FKEELDSIILKL--PKKRQSLLFSATMSKYMNVIAHSYLIEPKEIITGKRNICSDDVKH- 220
Query: 138 LVFAGSEEGKLLALRQSFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLS 195
+ + S K LAL++ ++P + +IF ++++ KE+ L DG I+ DLS
Sbjct: 221 IYYIVSNSNKYLALKR--IVDIHPEIYGIIFCRTRKNTKEIAESLIQDGYNTDAIYGDLS 278
Query: 196 QTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
Q QRE+ ++ FR K +L+ATDV ARG+D + VINY+ PD Y+HR
Sbjct: 279 QAQRESVMNKFRTKKLQLLVATDVAARGIDVNDITHVINYNLPDENEIYVHR 330
>gi|420369243|ref|ZP_14869968.1| ATP-dependent RNA helicase rhlE [Shigella flexneri 1235-66]
gi|391321569|gb|EIQ78292.1| ATP-dependent RNA helicase rhlE [Shigella flexneri 1235-66]
Length = 447
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|190407035|gb|EDV10302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207345345|gb|EDZ72198.1| YGL078Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146428|emb|CAY79685.1| Dbp3p [Saccharomyces cerevisiae EC1118]
gi|365765558|gb|EHN07065.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|381405224|ref|ZP_09929908.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
gi|380738423|gb|EIB99486.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
Length = 453
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLAHQNAVDLSKVEILVLDEADRMLDMG----FIHDIRRVLARLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++ + V V R+NTASE + Q++ F + + L L
Sbjct: 179 AKRQNLLFSATFSDEIKGLAEKLLTNPEMVEVARRNTASEQVAQQVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q E VL+F ++K A L +L DGI A IH + SQ R A+ DF++G
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGITAAAIHGNKSQGARTRALADFKSGGIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|294880401|ref|XP_002768997.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
gi|239872070|gb|EER01715.1| ATP-dependent RNA helicase ded-1, putative [Perkinsus marinus ATCC
50983]
Length = 689
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 9/255 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA+Q E +K + ++ T L + CDIL++TP RL + R ++
Sbjct: 296 LASQIHEEARKFCYNTGIRPVVVYGGADVRTQLRELERGCDILVATPGRLSDLMERFRVS 355
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI----VRSLFSATLPDFVEELARS 114
L +++ L+ DEAD++ ++G I +V+ PS ++FSAT P +++LAR
Sbjct: 356 LCQIKMLIFDEADRMLDMG-FEPQIRRIVEQEDMPSSRDGRQSAMFSATFPKEIQQLARD 414
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPV-LIFVQSKERA 173
+ + + + VGR + SIKQ + + E KL L + E + L+FV++K +A
Sbjct: 415 FLKEYIYLTVGRVGSTHGSIKQIMRYV-DENSKLRDLYRVLEEQTEEGLTLVFVETKRKA 473
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
E+ L D A IH D SQ +RE A+ F++G+ +L+ATDV ARG+D VN VI
Sbjct: 474 DEIENMLRRDRYPATSIHGDRSQWEREEALKAFKSGELPILVATDVAARGLDISHVNLVI 533
Query: 234 NYDFPDSGAAYIHRI 248
NYD P++ Y+HRI
Sbjct: 534 NYDLPNNIDDYVHRI 548
>gi|427382508|ref|ZP_18879228.1| hypothetical protein HMPREF9447_00261 [Bacteroides oleiciplenus YIT
12058]
gi|425729753|gb|EKU92604.1| hypothetical protein HMPREF9447_00261 [Bacteroides oleiciplenus YIT
12058]
Length = 435
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 121/214 (56%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FFDDIMQIVKYL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLANTILNNPAEVKLAVSRPADKIVQA--AYVCYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKLMKLNVGEMHSDLEQAQREEVMHEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + V+NYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVLNYDVPHDSEDYVHRI 332
>gi|398364607|ref|NP_011437.3| RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|1708151|sp|P20447.2|DBP3_YEAST RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|172582|gb|AAA73137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322595|emb|CAA96783.1| DBP3 [Saccharomyces cerevisiae]
gi|285812127|tpg|DAA08027.1| TPA: RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|392299185|gb|EIW10279.1| Dbp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|91201974|emb|CAJ75034.1| similar to ATP-independent RNA helicase DbpA [Candidatus Kuenenia
stuttgartiensis]
Length = 449
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+I+++ P RL ++++ I+LSRVE LVLDEAD +F++G L I ++K S+
Sbjct: 121 GVEIVVACPGRLLDHMKQRTIELSRVEVLVLDEADHMFDMG-FLPDIRKIIKCLSHKRQT 179
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+PD + +LA+ + V V +G+ TA S + ++ + K+ L +
Sbjct: 180 L-LFSATMPDEIRKLAQEALTKPVTVQLGK--TAPASTVKHALYPVKQHLKIPLLLKILQ 236
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ VLIF ++K RAK L L G +A +LSQ QR+ A+ FR G +L+A
Sbjct: 237 HTDTQSVLIFTRTKYRAKSLGDRLIRAGYKATSFQGNLSQPQRQAALGGFRNGAYQILVA 296
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D ++ VINYD PD+ AY+HRI
Sbjct: 297 TDIAARGIDISQISHVINYDIPDTPEAYVHRI 328
>gi|386720987|ref|YP_006187312.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|384088111|gb|AFH59547.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 425
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 138/254 (54%), Gaps = 13/254 (5%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q T E + A KG + +++ R + + I+++TP RL +RR+ +
Sbjct: 84 LAIQITEEVARWAPLKGIRVLSAYGGQDVERQIRKLEGAIHIIVATPGRLLDHLRRETVQ 143
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSIM 116
L ++ LVLDEAD++ +G L + VV+ S R LFSAT+P+ V +LA+ M
Sbjct: 144 LFKLSTLVLDEADQMLHMGFLPE----VVEIISATPTRRQTLLFSATMPERVRQLAKEYM 199
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVL--IFVQSKERAK 174
V + V K + I+Q +V S+ GKL AL ++ E +PP L IF ++K RA
Sbjct: 200 KPPVEIEVKAKRVTLDEIEQ-IVVQTSDRGKLDALCKAMEE--DPPFLGMIFCRTKLRAT 256
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L EL G +H DL+Q +RE + FR K L+ATD+ ARG+D +G+ V N
Sbjct: 257 KLRDELDERGYAVDELHGDLTQAKREQVMKRFRDAKIQFLVATDIAARGLDVEGITHVYN 316
Query: 235 YDFPDSGAAYIHRI 248
YD P +YIHRI
Sbjct: 317 YDIPHDAESYIHRI 330
>gi|349578148|dbj|GAA23314.1| K7_Dbp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 523
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|367015284|ref|XP_003682141.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
gi|359749803|emb|CCE92930.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
Length = 549
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q +EC K K ++ + + + R + + +I+I+TP RL + K +
Sbjct: 194 LAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRDLARGAEIVIATPGRLIDMLEIGKTN 253
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LA
Sbjct: 254 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDY 308
Query: 116 MHDAVRVIVGR-KNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+HD ++V +G + AS +IKQ +++ + +L ++ +L+F +K
Sbjct: 309 LHDPIQVQIGSLELAASHNIKQVVEVITDFEKRDRLTKHMDIASQDKESKILVFASTKRT 368
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +++FR G++ +++ATDV ARG+D KG+N V
Sbjct: 369 CDEITKYLRDDGWPALAIHGDKDQRERDWVLNEFRTGRSPIMVATDVAARGIDVKGINYV 428
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 429 INYDMPGNIEDYVHRI 444
>gi|395765869|ref|ZP_10446460.1| hypothetical protein MCO_01336 [Bartonella sp. DB5-6]
gi|395410874|gb|EJF77421.1| hypothetical protein MCO_01336 [Bartonella sp. DB5-6]
Length = 459
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 21/258 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + A+G L+ + R + + D+LI+TP RLR +R K +D
Sbjct: 92 LAVQIDETIRVAARGTHLSTCLIFGGVSRLKQIKRIEAGVDVLIATPGRLRDLVREKCVD 151
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + K +P +LFSAT+P + LA+ ++++
Sbjct: 152 LSQSRFLVLDEADRMLDMG-FINDVQQIAKLL-HPERQTALFSATMPKEINVLAKCLLNE 209
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEE-----GKLLALRQSFAESLNPP---VLIFVQSK 170
V + V + T I QKL + E GKLL NP V++F ++K
Sbjct: 210 PVTIEVTPQGTTVAEITQKLYCVPTSEKKNVLGKLLT---------NPALTSVIVFTRTK 260
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
A + L G IH + SQ+ R++A+ FR VL+ATD+ ARG+D G++
Sbjct: 261 HGADAVTRTLTKIGYSVATIHGNKSQSARQSALKAFREQAVRVLVATDIAARGIDVLGIS 320
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD PD +Y+HRI
Sbjct: 321 HVINYDLPDEAESYVHRI 338
>gi|363753554|ref|XP_003646993.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890629|gb|AET40176.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
Length = 560
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 138/256 (53%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K ++ + + + +S + +ILI+TP RL + K +
Sbjct: 208 LAVQIQKECSKFGHSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTN 267
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 268 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 322
Query: 116 MHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP--VLIFVQSKER 172
+HD ++V +G + AS +I Q + E + ++ S +P ++IF +K
Sbjct: 323 LHDPIQVNIGSLELAASHTITQIVEVISDFEKRDRLVKHLDIASKDPESKIIIFASTKRT 382
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
++ L DG A IH D Q +R+ +++FR G++ +++ATDV ARG+D KG+N V
Sbjct: 383 CDDITSYLRQDGWPALAIHGDKQQQERDWVLNEFRCGRSPIMVATDVAARGIDVKGINFV 442
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 443 INYDMPGNIEDYVHRI 458
>gi|340522872|gb|EGR53105.1| predicted protein [Trichoderma reesei QM6a]
Length = 561
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ PS+
Sbjct: 209 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPSVA 267
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 268 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDI 327
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ A L LIFV++K A L L A IH D +Q +RE A++ FR G+
Sbjct: 328 LHTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRERERALEFFRNGRC 384
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 385 PILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRI 421
>gi|319405915|emb|CBI79547.1| ATP-dependent RNA helicase [Bartonella sp. AR 15-3]
Length = 430
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 27/261 (10%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q +AKG L+ + R T + + + DIL++TP RL IR K +D
Sbjct: 92 LAIQIEEAISAVAKGTHLSTCLILGGMSRLTQIRRMAKGVDILVATPGRLIDLIRSKYVD 151
Query: 59 LSRVEYLVLDEADKLFEVG--NLLKHIDPVV-KACSNPSIVRSLFSATLPDFVEELARSI 115
LS+ + +LDEAD++ ++G N ++ I + K C +LFSAT+ V LA ++
Sbjct: 152 LSKSRFFILDEADRMLDMGFINDVRQIANFLHKKCQT-----ALFSATMSKEVNVLADNL 206
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEE-----GKLLALRQSFAESLNPP---VLIFV 167
+ V++ V + T + I Q L + E GKLL NP V++F+
Sbjct: 207 LKKPVKIEVVSQGTTAAEITQVLYCVSTSEKKSVLGKLLT---------NPALASVIVFI 257
Query: 168 QSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFK 227
++K A + LA G IH + SQ R+ A+ DFR G VL+ATD+ ARG+D
Sbjct: 258 RTKHGADSVARSLAKTGYSVATIHGNKSQNARQRALKDFREGLVRVLVATDIAARGIDIP 317
Query: 228 GVNCVINYDFPDSGAAYIHRI 248
++ VINYD PD+ +Y+HRI
Sbjct: 318 RISHVINYDLPDNAESYVHRI 338
>gi|365105460|ref|ZP_09334707.1| ATP-dependent RNA helicase rhlE [Citrobacter freundii 4_7_47CFAA]
gi|363643475|gb|EHL82793.1| ATP-dependent RNA helicase rhlE [Citrobacter freundii 4_7_47CFAA]
Length = 448
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|339444851|ref|YP_004710855.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
gi|338904603|dbj|BAK44454.1| hypothetical protein EGYY_12990 [Eggerthella sp. YY7918]
Length = 418
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 139/253 (54%), Gaps = 11/253 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
LA Q C + +G++ ++ + + +++ + DILI+TP RL ++R +
Sbjct: 88 LAQQIDAACSDMTRGSRVRVLSVVGGMPYKGQIARLNKGIDILIATPGRLFDLMQRGDVK 147
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVK---ACSNPSIVRSLFSATLPDFVEELARSI 115
L RVE LVLDEAD++ ++G P +K A + S LFSAT+ V + +I
Sbjct: 148 LDRVETLVLDEADRMLDMGFW-----PTMKKIVAATPASRQTLLFSATIERKVMDSVSTI 202
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
++D V + + ++++ Q V ++ K LR + V++FV++++RA
Sbjct: 203 LNDPAFVEIAHRGETADTVDQ-YVIPVTQMKKPALLRAVLEDKGADRVIVFVRTRQRADM 261
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
+L G R IHSD +Q QR+ A+D F GKT VL+ATDV+ARG+D V+ VINY
Sbjct: 262 CTHQLRAAGYRVDSIHSDKTQAQRKRALDGFSEGKTDVLVATDVLARGIDVSLVHHVINY 321
Query: 236 DFPDSGAAYIHRI 248
D PD+ YIHRI
Sbjct: 322 DLPDNPEDYIHRI 334
>gi|218780301|ref|YP_002431619.1| DEAD/DEAH box helicase [Desulfatibacillum alkenivorans AK-01]
gi|218761685|gb|ACL04151.1| DEAD/DEAH box helicase domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 430
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
DI+++ P RL I RK +DLSRVE LVLDEAD++F++G L I ++
Sbjct: 120 SDIVVACPGRLLDHIGRKNVDLSRVEMLVLDEADQMFDMG-FLPDIRKILTFLPRKGRQT 178
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
+FSAT+P ++ LA ++H+ V V +G A +++K + ++ K L Q
Sbjct: 179 LMFSATMPAQIKRLAGEVLHNHVLVQIGHVAPA-DTVKHAF-YPVAQHLKTALLLQLLGS 236
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ VL+F ++K +AK+L +L G + + +LSQ++R +A++ F++GK VL+AT
Sbjct: 237 TGTESVLVFTRTKYKAKQLGNKLTKAGFSSASLQGNLSQSRRVDAMNGFKSGKYQVLVAT 296
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
D+ ARG+D V+ VINYD P + Y+HRI
Sbjct: 297 DIAARGIDVANVSHVINYDMPSTPETYMHRI 327
>gi|455643914|gb|EMF23035.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii GTC 09479]
Length = 448
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|187734531|ref|YP_001876643.1| DEAD/DEAH box helicase [Akkermansia muciniphila ATCC BAA-835]
gi|187424583|gb|ACD03862.1| DEAD/DEAH box helicase domain protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 423
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 122/215 (56%), Gaps = 11/215 (5%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR- 97
DIL++TP RL + R+ + L VE L+LDEAD + ++G P +K + I R
Sbjct: 129 DILVATPGRLIDHLERRTVSLDGVETLILDEADHMLDMG-----FAPALKKIVS-KIPRK 182
Query: 98 ---SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLALRQ 153
+FSAT+PD + +LA++++ V V ++ ++ ++Q L GS+ E +LL L
Sbjct: 183 RHTQMFSATMPDNIRQLAQTLLQKPETVRVSPPSSTADRVEQFLCMVGSQSEKRLLTLEL 242
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ L LIF +++ A L L+ A IH D SQ +RE + +FR+GKT V
Sbjct: 243 LKQQELPGRTLIFTRTRHGADRLASFLSGKDYPASAIHGDKSQGRRERMLREFRSGKTPV 302
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D K V VINYD P+ Y+HRI
Sbjct: 303 LVATDIAARGIDVKDVRLVINYDLPEEPEVYVHRI 337
>gi|256269719|gb|EEU04989.1| Dbp3p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + +++ V K++ +SIKQ + F +E L
Sbjct: 177 ---PKEKQTLFFSATMPDTIIALTNSLLKNPLKIYVTPKSSTVDSIKQLVYFVEKKEKSL 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL +RR ++L+++E+LV DEAD++ ++G ID +VK P
Sbjct: 142 GVDILVATPGRLLDHLRRGSLNLNQLEFLVFDEADRMLDMG-FKDEIDAIVKQL--PKTR 198
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT + + L++S++ D ++ VG +N A+ I Q++ S+ + LAL
Sbjct: 199 QTLLFSATFDESIYGLSQSLLRDPKQIEVGERNAAAVEIDQRVYAVDSD--RKLALVTHL 256
Query: 156 AESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
ES N VLIF + K A +L L GI A H DLSQ RE + F+ G+ VL
Sbjct: 257 IESGNLQQVLIFSRKKLAADKLAANLTKAGISAQAFHGDLSQGAREKVLQGFKDGEVRVL 316
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D +N VINY+ P Y+HRI
Sbjct: 317 VATDVAARGIDIIDLNYVINYELPYKAEDYVHRI 350
>gi|395227497|ref|ZP_10405823.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. A1]
gi|421844472|ref|ZP_16277630.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424728799|ref|ZP_18157404.1| atp-dependent rna helicase [Citrobacter sp. L17]
gi|394718825|gb|EJF24446.1| ATP-dependent RNA helicase RhlE [Citrobacter sp. A1]
gi|411774627|gb|EKS58117.1| ATP-dependent RNA helicase RhlE [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896670|gb|EKU36452.1| atp-dependent rna helicase [Citrobacter sp. L17]
Length = 448
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|150391088|ref|YP_001321137.1| DEAD/DEAH box helicase [Alkaliphilus metalliredigens QYMF]
gi|149950950|gb|ABR49478.1| DEAD/DEAH box helicase domain protein [Alkaliphilus metalliredigens
QYMF]
Length = 549
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 9/252 (3%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q T E KKLA KG +++ + K S I+I TP RL +RRK I+
Sbjct: 83 LAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTIN 142
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLF-SATLPDFVEELARSIMH 117
L ++ LVLDEAD++ +G L+ ++ ++ P +++F SAT+P+ V LA M
Sbjct: 143 LGKLSMLVLDEADQMLHMG-FLRDVEDIMTHI--PKRRQNMFFSATMPNQVRTLAEQYMK 199
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAKEL 176
D V++ V K + I+Q +V ++ GK L Q F E NP +IF ++K RA L
Sbjct: 200 DPVQIQVQSKRVTLDEIRQ-VVIETTDRGKQDLLCQLFDE-YNPFMAIIFCRTKRRAIAL 257
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
L G + +H DL+Q +RE + F+ K L+ATDV ARG+D +GV + NYD
Sbjct: 258 NEALINLGYNSDELHGDLTQAKREKVMKAFKKSKIQYLVATDVAARGLDIEGVTHIFNYD 317
Query: 237 FPDSGAAYIHRI 248
P G +YIHRI
Sbjct: 318 IPQDGESYIHRI 329
>gi|389749883|gb|EIM91054.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 487
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 139/257 (54%), Gaps = 16/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K ++ + + + + +I+I+TP RL + +K +
Sbjct: 146 LAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLETQKTN 205
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ P +FSAT P V++LA
Sbjct: 206 LRRVTYLVLDEADRMLDMG-----FEPQIRKIIGQIRPDRQTLMFSATWPKDVQKLAADF 260
Query: 116 MHDAVRVIVGRKN-TASESIKQKLVFAGSEE--GKLLA-LRQSFAESLNPPVLIFVQSKE 171
+ D ++ +G TA+ +IKQ + E GKL+ L Q AE N VLIFV +K
Sbjct: 261 LKDMIQCNIGSMELTANHNIKQIVEICSDFEKRGKLIKHLDQISAE--NAKVLIFVGTKR 318
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A ++ L DG A IH D Q +R+ + +F+AG++ +LIATDV +RG+D K V
Sbjct: 319 VADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILIATDVASRGLDVKDVGY 378
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP++ YIHRI
Sbjct: 379 VINYDFPNNCEDYIHRI 395
>gi|290987818|ref|XP_002676619.1| predicted protein [Naegleria gruberi]
gi|284090222|gb|EFC43875.1| predicted protein [Naegleria gruberi]
Length = 493
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 145/253 (57%), Gaps = 9/253 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q RE K A+ +F+++ + + + + L + C+IL++TP RL + +
Sbjct: 176 LAEQIEREATKYARQFEFRVQAIIGGVSIEKQSRLIRGGCEILVATPGRLIDCLNNSIVV 235
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
L++ ++VLDEADK+ E+ N K ++ +++ + P+ ++ LFSAT+P VE +A
Sbjct: 236 LNQCHFIVLDEADKMIEM-NFEKDVNTILE--NMPTHIQRQTMLFSATMPPEVENIAMKY 292
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
+ V V VG A E I+Q++++ E K L + ++ +PPV++F K+
Sbjct: 293 LKKRVTVAVGEVGRAVERIEQEVMWIKHENAKRDKLLELLYDA-DPPVIVFCNLKKEVDA 351
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
+ ++ G R+ IH + SQ R +A++ F++GK V++ATDV+ RG+D GV V+NY
Sbjct: 352 IAKFVSNAGFRSTSIHGNKSQEARNSALEAFKSGKFDVIVATDVLGRGIDISGVTLVVNY 411
Query: 236 DFPDSGAAYIHRI 248
P + +AY HRI
Sbjct: 412 SLPKTISAYTHRI 424
>gi|66807079|ref|XP_637262.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|74996736|sp|Q54KG1.1|DDX41_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx41; AltName:
Full=DEAD box protein 41
gi|60465669|gb|EAL63748.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 671
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 8/211 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 98
++I+TP RL + +KKI+ +YL LDEAD+L ++G D + N + R
Sbjct: 358 MIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLG----FEDDIRSVLDNFTNQRQT 413
Query: 99 -LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++E ARS + V V VGR A+ ++ Q++ F E K++ L + +
Sbjct: 414 LLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQEVEFV-KPEAKIVYLLECLQK 472
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF ++K+ ++Y L + A IH D SQ +RE+A+ FR GK VL+AT
Sbjct: 473 T-PPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVAT 531
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VIN+D P YIHRI
Sbjct: 532 DVASKGLDFPEIQHVINFDMPREIENYIHRI 562
>gi|85860953|ref|YP_463155.1| superfamily II DNA/RNA helicase [Syntrophus aciditrophicus SB]
gi|85724044|gb|ABC78987.1| superfamily II DNA and RNA helicases [Syntrophus aciditrophicus SB]
Length = 572
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 130/223 (58%), Gaps = 7/223 (3%)
Query: 27 LVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPV 86
+V T+ + ++++TP RL IRR +DLS V ++VLDEAD++ ++G ++ +
Sbjct: 112 IVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMG-FQDELNAI 170
Query: 87 VKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG 146
+ A + S LFSAT+P V +A + M D + +IVGR+N +E++ + + S
Sbjct: 171 L-AVTPDSKNTLLFSATMPREVAAIAANYMKDPLEIIVGRRNAGAENVDH-IYYVVSARH 228
Query: 147 KLLALRQSFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
+ ALR+ +NP + +IF +++ +E+ +L DG A +H DLSQ+QR++ +
Sbjct: 229 RYQALRR--IADMNPELYAIIFCRTRLETREIVDKLIEDGYSADALHGDLSQSQRDHVMH 286
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
FR+ +L+ATDV ARG+D + VINY P+ + Y HR
Sbjct: 287 KFRSRNIRMLVATDVAARGLDVNDLTHVINYSLPEESSGYTHR 329
>gi|392566634|gb|EIW59810.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 640
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ V YLVLDEAD++ ++G I +V+ P +
Sbjct: 305 GCDLLSATPGRLVDLIERGRISLANVRYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQ 363
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR M D V + VGR + SE+I Q++ + + + LL +
Sbjct: 364 ERQTLMFSATFPRDIQMLARDFMKDYVFLSVGRVGSTSENITQRVEYVEDADKRSVLLDV 423
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
Q+ + L L+FV++K A L L + + A IH D +Q +RE A+ F+ G+T
Sbjct: 424 LQANSTGL---TLVFVETKRMADMLSDFLLGNNMPATSIHGDRTQREREMALQTFKTGRT 480
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 481 PILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 517
>gi|377577364|ref|ZP_09806346.1| ATP-dependent RNA helicase RhlE [Escherichia hermannii NBRC 105704]
gi|377541102|dbj|GAB51511.1| ATP-dependent RNA helicase RhlE [Escherichia hermannii NBRC 105704]
Length = 488
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 126/218 (57%), Gaps = 11/218 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+LI+TP RL + + L +VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLIATPGRLLDLEHQNAVKLDKVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-LLAL-- 151
LFSAT D ++ LA ++H+ V V R+NTASE I Q + F + + LL+L
Sbjct: 181 RQNLLFSATFSDDIKSLAEKLLHNPAEVEVARRNTASEQITQYVHFVDKKRKRELLSLMI 240
Query: 152 -RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
++++ + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 241 GKENWQQ-----VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 296 LRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|386821083|ref|ZP_10108299.1| DNA/RNA helicase, superfamily II [Joostella marina DSM 19592]
gi|386426189|gb|EIJ40019.1| DNA/RNA helicase, superfamily II [Joostella marina DSM 19592]
Length = 595
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K I+++TP R++ I R +D+S++EY VLDEAD++ +G + I+ ++
Sbjct: 120 KRGAQIVVATPGRMKDMISRNMVDISKIEYCVLDEADEMLNMG-FYEDINEILSHAPKEK 178
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P V +A+ M + V VG KN A+ +++ + G + + LAL++
Sbjct: 179 STW-LFSATMPREVATIAKKFMKNPQEVTVGAKNAATSNVQHEYYVVGGRD-RYLALKR- 235
Query: 155 FAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
A++ NP + +IF ++K +++ +L DG AG +H DLSQ QR+ + FR+ +
Sbjct: 236 LADT-NPDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQRDMVMKSFRSKQIQ 294
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+L+ATDV ARG+D V VINY PD Y HR
Sbjct: 295 MLVATDVAARGIDVDDVTHVINYQLPDEIETYTHR 329
>gi|218131071|ref|ZP_03459875.1| hypothetical protein BACEGG_02675 [Bacteroides eggerthii DSM 20697]
gi|217986775|gb|EEC53108.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 428
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMG-FYDDIMQIVKFL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA+SI+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPAKIQQLAKSILNNPAEVKLAVSKPAEKIVQ--AAYVCYENQKLGIIRSL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKQMKLNVGEMHSDLEQAQREEVMYEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|114149265|sp|Q3MSQ8.1|DDX4_RANLE RecName: Full=Probable ATP-dependent RNA helicase DDX4; AltName:
Full=DEAD box protein 4; AltName: Full=Vasa homolog
gi|76253272|emb|CAH56439.1| DEAD box protein [Pelophylax lessonae]
Length = 724
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 129/215 (60%), Gaps = 6/215 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
C+IL +TP RL IR++KI L+++ YLVLDEAD++ ++G + I+ ++K+ PS
Sbjct: 414 CNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMG-FREDIENLLKSSGMPSKEE 472
Query: 98 S---LFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR I+ D + V+VG+ A ++Q +V E GK L +
Sbjct: 473 RQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQ-MVIEVDEFGKKDKLME 531
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E + ++FV++K++A + L + + + IH D Q +RE A+ DFR G+ V
Sbjct: 532 ILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPV 591
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++AT V ARG+D + V+ VIN+D PD Y+HRI
Sbjct: 592 IVATSVAARGLDIENVSYVINFDIPDDIDEYVHRI 626
>gi|348689892|gb|EGZ29706.1| hypothetical protein PHYSODRAFT_323195 [Phytophthora sojae]
Length = 631
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 7/215 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R +I L+ + +L+LDEAD++ ++G I +V+ P
Sbjct: 285 GCDLLVATPGRLVDLMERGRISLACIRFLILDEADRMLDMG-FEPQIRRIVEQEDMPRER 343
Query: 97 RS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVF--AGSEEGKLLALRQ 153
++ +FSAT P ++ LA + D + + VGR +AS+ +KQ + + +E L+
Sbjct: 344 QTFMFSATFPREIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLN 403
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ L +L+FV++K A L L +G A IH D SQ +RE A+ F++G+T V
Sbjct: 404 QVQDGL---ILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPV 460
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D GV VIN+D P++ Y+HRI
Sbjct: 461 LVATDVAARGLDIDGVTQVINFDLPNNIDDYVHRI 495
>gi|378725351|gb|EHY51810.1| ATP-dependent RNA helicase ded1 [Exophiala dermatitidis NIH/UT8656]
Length = 661
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 314 GCDLLVATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPTVQ 372
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D V + VGR + SE+I QK+ + ++ + LL +
Sbjct: 373 NRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDQDKRSVLLDI 432
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
S L LIFV++K A L L G A IH D +Q +RE A++ FR G+
Sbjct: 433 LHSHNGGL---TLIFVETKRMADTLSDFLINQGFPATAIHGDRTQRERERALEFFRNGRC 489
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+++AT V ARG+D V VINYD P Y+HRI
Sbjct: 490 PIMVATAVAARGLDIPNVLHVINYDLPTDIDDYVHRI 526
>gi|197119659|ref|YP_002140086.1| ATP-dependent RNA helicase RhlE [Geobacter bemidjiensis Bem]
gi|197089019|gb|ACH40290.1| ATP-dependent RNA helicase RhlE [Geobacter bemidjiensis Bem]
Length = 471
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K +I+++ P RL I + IDLSRVE LVLDEAD++F++G L + +++A P
Sbjct: 118 KEGAEIVVACPGRLLDHISQGTIDLSRVEILVLDEADQMFDMG-FLPDVRKILRAL--PG 174
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT+PD + LA I+ + V V V R TA + ++ + K L +
Sbjct: 175 KRQNLMFSATMPDDIRRLAHEILRNPVTVQVSR--TAPAATVSHALYPVGQHLKTPLLFE 232
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ VLIF ++K RAK + +L G +A + +LSQ +R+ A+D FR G +
Sbjct: 233 MLKHTDTESVLIFTKTKHRAKRVGEQLEKAGYKATSLQGNLSQNRRQAALDGFRDGTFQI 292
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ATD+ ARG+D ++ VINYD PD+ AY HRI
Sbjct: 293 MVATDIAARGIDVSLISHVINYDIPDTPEAYTHRI 327
>gi|95928808|ref|ZP_01311554.1| DEAD/DEAH box helicase-like [Desulfuromonas acetoxidans DSM 684]
gi|95135153|gb|EAT16806.1| DEAD/DEAH box helicase-like [Desulfuromonas acetoxidans DSM 684]
Length = 426
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 130/216 (60%), Gaps = 11/216 (5%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL + +K +DLS+VE L+LDEAD++ ++G ++ I V+ A
Sbjct: 125 GVDILVATPGRLLDHVSQKTVDLSKVEILILDEADRMLDMG-FIRDIRKVL-ALLPKKRQ 182
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL-VFAGSEEGKLLAL---R 152
LFSAT D ++ LA S+++ + V R+NTASE ++Q + + S + +LL+
Sbjct: 183 NLLFSATFSDDIKRLADSLLNTPTLIEVARRNTASEQVEQSVHLIEKSRKRELLSHMIGS 242
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q++ + VL+F ++K A L +L DG+++ IH + +Q R A+ DF+AG+
Sbjct: 243 QNWQQ-----VLVFTRTKRGANRLAQQLEKDGLKSTAIHGNKTQGARTKALADFKAGRAR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + V+NY+ PD Y+HRI
Sbjct: 298 VLVATDIAARGLDIDQLPNVVNYELPDVPEDYVHRI 333
>gi|365131100|ref|ZP_09341738.1| hypothetical protein HMPREF1032_02817, partial [Subdoligranulum sp.
4_3_54A2FAA]
gi|363619201|gb|EHL70527.1| hypothetical protein HMPREF1032_02817, partial [Subdoligranulum sp.
4_3_54A2FAA]
Length = 408
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 120/219 (54%), Gaps = 13/219 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL +TP RL I + IDL VE VLDEAD++ ++G H V AC
Sbjct: 122 KKGVDILTATPGRLNDLIGQGYIDLKNVEIFVLDEADRMLDMG--FVHDVKRVLACLPGQ 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLALR 152
LFSAT+P +EELA ++H +V+V T E I+Q + F G++ L L
Sbjct: 180 KQTLLFSATMPREIEELADGLLHGPEKVMVAPPATTVERIEQSVYFVDKGNKRHLLAKLL 239
Query: 153 QSFAESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
Q NP V L+F ++K A + ELA GI A IH + SQ R++A+ F+ G
Sbjct: 240 Q------NPEVTSALVFTRTKHGADRVVRELARAGIGAMAIHGNKSQNARQDALGRFKDG 293
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ VL+ATD+ ARG+D G++ V NYD P+ Y+HRI
Sbjct: 294 RIRVLVATDIAARGIDVSGLSHVFNYDLPNIPETYVHRI 332
>gi|326531018|dbj|BAK04860.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531744|dbj|BAJ97876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK Q+ + + + K C+I+++TP RL ++ K +
Sbjct: 125 LAHQIYLEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKALR 184
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R Y VLDEAD++F++G +P +++ P LFSAT+P VE LAR I
Sbjct: 185 MFRATYSVLDEADRMFDLG-----FEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREI 239
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERAK 174
+ D +RV VG+ +A+E IKQ + S+ K+ L + ++ VL+F K R
Sbjct: 240 LTDLIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKMPGMIDDGDVLVFATKKARVD 299
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G + +H D Q R + F++G VL+ATDV ARG+D K + V+N
Sbjct: 300 EVENQLNQHGFKVAALHGDKDQASRMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVN 359
Query: 235 YDFPDSGAAYIHRI 248
+D +IHRI
Sbjct: 360 FDIAKEMDMHIHRI 373
>gi|334365759|ref|ZP_08514708.1| DEAD/DEAH box helicase [Alistipes sp. HGB5]
gi|313157865|gb|EFR57271.1| DEAD/DEAH box helicase [Alistipes sp. HGB5]
Length = 502
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 14/218 (6%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSN 92
D++I+TP R+ I+ IDLS VE L+LDEAD++ ++G +++K + + K
Sbjct: 124 MGSDVVIATPGRMISHIQNSGIDLSHVECLILDEADRMLDMGFSEDIMKIVSYMPKERQT 183
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
+FSATLP + ELA++I+ + V + + + N E+I Q + E KL
Sbjct: 184 -----IMFSATLPPKIRELAKTILRNPAEVNIAISKPN---EAIDQS-AYVCYENQKLGI 234
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+R+ FAE +IF SK + KEL L + +HSDL Q QRE + DF+ K
Sbjct: 235 IREMFAEPTESKTIIFSSSKMKVKELAHTLKRMKLNVAAMHSDLEQAQREEVMLDFKNNK 294
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATD++ARG+D + + VINYD P YIHRI
Sbjct: 295 VSILVATDIVARGIDIEDIGLVINYDVPHDPEDYIHRI 332
>gi|288818118|ref|YP_003432466.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|384128882|ref|YP_005511495.1| DEAD/DEAH box helicase [Hydrogenobacter thermophilus TK-6]
gi|288787518|dbj|BAI69265.1| ATP-dependent RNA helicase [Hydrogenobacter thermophilus TK-6]
gi|308751719|gb|ADO45202.1| DEAD/DEAH box helicase domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 365
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 2/216 (0%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
LSK +I+I TP R++ + R ++L V +LVLDEAD + ++G ++ I+ ++ A +
Sbjct: 115 LSKVVPNIVIGTPGRIKDLLSRGVLNLGGVSFLVLDEADLMLDMG-FVEDIESII-AYTP 172
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
LFSAT+P +E LAR + D + + I+++L+ S + K+ L
Sbjct: 173 KDRQTFLFSATIPKEIELLARKHLKDDYKFVRVISAELKPKIEERLIRLNSSKQKISELE 232
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ E L V+IFV++K+ A+++ EL G +H D++Q QRENA+ FR GK
Sbjct: 233 RILREHLLEKVIIFVRTKKDARDISQELKNRGFSVVSLHGDMTQRQRENALKLFREGKVK 292
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ATDV +RG+D KGV+ VINY P+ YIHRI
Sbjct: 293 TVVATDVASRGLDIKGVSLVINYQIPEDPEVYIHRI 328
>gi|91772311|ref|YP_565003.1| DEAD/DEAH box helicase-like protein [Methanococcoides burtonii DSM
6242]
gi|91711326|gb|ABE51253.1| DEAD-box RNA helicase [Methanococcoides burtonii DSM 6242]
Length = 463
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 123/212 (58%), Gaps = 5/212 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
D L++TP RL I++ I LS VEY VLDEAD++ ++G L ++ +V P +
Sbjct: 125 VDCLVATPGRLLDLIQQGHIKLSNVEYFVLDEADRMLDMG-FLNDVNKIVDML--PKKRQ 181
Query: 98 SLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
SLF SAT+ + LAR ++ + +V V + T E I+Q + F S+ L L
Sbjct: 182 SLFFSATMSPEISTLARKMLSNPAQVEVTPQATTVERIEQFIFFVDSDNKNELLLHLLRG 241
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E L+ VL+F ++K RA ++ L I AG IH SQT R + +F++G+ VL+A
Sbjct: 242 EHLDC-VLVFTRTKHRANKVTEMLNKSNINAGAIHGSKSQTHRTKTLQNFKSGQLRVLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D + ++ VINYD P+ +Y+HRI
Sbjct: 301 TDIAARGIDIEDISHVINYDLPNIPESYVHRI 332
>gi|323355122|gb|EGA86952.1| Dbp3p [Saccharomyces cerevisiae VL3]
Length = 537
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|56201870|dbj|BAD73320.1| putative ethylene-responsive RNA helicase [Oryza sativa Japonica
Group]
Length = 521
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 130/221 (58%), Gaps = 13/221 (5%)
Query: 34 SKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN- 92
+KF +I+I+TP RL I +L RV YLVLDEAD++ ++G +P +K +
Sbjct: 185 TKFGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMG-----FEPQIKKIVSQ 239
Query: 93 --PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEE-GK 147
P +SAT P VE+LAR+ + D +VI+G + A+ +I Q + + + S++ K
Sbjct: 240 IRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNK 299
Query: 148 LLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
L+ L + + +LIF+ +K+ ++ +L DG A IH D SQ +R+ + +F+
Sbjct: 300 LVNLLEDIMDGSR--ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 357
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+GK+ ++ ATDV ARG+D K V VINYDFP S Y+HRI
Sbjct: 358 SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 398
>gi|221056789|ref|XP_002259532.1| RNA helicase-1 [Plasmodium knowlesi strain H]
gi|193809604|emb|CAQ40305.1| RNA helicase-1, putative [Plasmodium knowlesi strain H]
Length = 669
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 140/266 (52%), Gaps = 31/266 (11%)
Query: 1 LATQTTRE----CKKLAKGNKFQIKLMKKELVRSTDLSKF--------SCDILISTPLRL 48
LATQT C+ L +G K+ M + L +S F ++++TP RL
Sbjct: 307 LATQTHNVIKYFCEFLHEGGKYP---MLRSLCMIGGVSTFDQGREIQKGIHMVVATPGRL 363
Query: 49 RLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSNPSIVRSLFSA 102
+ +K++ L + YL DEAD+L ++G N L H + LFSA
Sbjct: 364 NDMLNKKRMTLEQCRYLCFDEADRLIDLGFEEEVRNTLDHFSRQRQTL--------LFSA 415
Query: 103 TLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP 162
T+P ++E A+S + + + + VGR A+ + Q++ + EE KL L + ++ PP
Sbjct: 416 TMPKKIQEFAKSTLVNPIIINVGRAGAANLDVIQEVEYV-KEELKLSYLLEVLQKT-GPP 473
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
VLIF ++K+ +++ L G+ A IH +L QT+R+ A++ FR GK +L+ TDV ++
Sbjct: 474 VLIFCENKKDVDDVHEYLLLKGVNAIAIHGNLGQTERQEAINLFREGKKDILVGTDVASK 533
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+DF + VINYD P Y+HRI
Sbjct: 534 GLDFPSIEHVINYDMPKDIENYVHRI 559
>gi|404492159|ref|YP_006716265.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
gi|77544268|gb|ABA87830.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
Length = 432
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
K DI+++ P RL I +K IDLS +E LVLDEAD++F++G +L+H+ +
Sbjct: 118 KRGVDIVVACPGRLIDHIGQKTIDLSNIEVLVLDEADQMFDMGFFPAVRQILRHVPAQRQ 177
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
LFSAT+P + L+ ++ + V VG T +E++ L + ++ K
Sbjct: 178 TL--------LFSATMPAAIRRLSGEVLTSPMTVQVG-NTTPAETVSHAL-YPVAQHQKT 227
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L + + + VL+F ++K RAK L +L G +A + +LSQ +R+ A+ FR
Sbjct: 228 AMLLELLSAVDSRSVLVFTRTKHRAKRLGLQLGKAGYQATSLQGNLSQARRQEALTGFRD 287
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GK +L+ATD+ ARG+D V+ VINYD PD+ AY+HRI
Sbjct: 288 GKYEILVATDIAARGIDVSQVSHVINYDIPDTAEAYVHRI 327
>gi|238794074|ref|ZP_04637691.1| ATP-dependent RNA helicase rhlE [Yersinia intermedia ATCC 29909]
gi|238726579|gb|EEQ18116.1| ATP-dependent RNA helicase rhlE [Yersinia intermedia ATCC 29909]
Length = 451
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|336125600|ref|YP_004577556.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
gi|335343317|gb|AEH34599.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
Length = 421
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+TP RL + + I L++ E LVLDEAD++ ++G L I ++K N
Sbjct: 131 GADILIATPGRLIDHLFVRNIILTQTEVLVLDEADRMLDMG-FLPDIQRILKRM-NDERQ 188
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT D ++ LA +M D V V + N ++++KQ +V+ ++ K L
Sbjct: 189 TLFFSATFDDKIKALAHKMMRDPVGVQISPANATADTVKQ-IVYPVDKKRKSELLAYLIG 247
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K+ + EL EL DGI+A I+ D SQ R+ A+DDF++GK LIA
Sbjct: 248 SRNWQQVLVFTKTKQGSDELAKELKLDGIKAASINGDKSQGARQKALDDFKSGKVRALIA 307
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+NYD P Y+HRI
Sbjct: 308 TDVAARGIDIQQLEQVVNYDMPYKAEDYVHRI 339
>gi|71280656|ref|YP_266818.1| DEAD-box ATP dependent DNA helicase [Colwellia psychrerythraea 34H]
gi|71146396|gb|AAZ26869.1| ATP-dependent RNA helicase, DEAD box family [Colwellia
psychrerythraea 34H]
Length = 420
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 130/216 (60%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DILI+TP RL +R + + LS +E LV DEAD++ ++G + ID + + P
Sbjct: 124 KVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMG-FKEEIDQITQYL--PK 180
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D + +++++I+ + V + KN A++ ++Q LV+ G + + L
Sbjct: 181 TKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQ-LVY-GVDADRKRELTS 238
Query: 154 SFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
S N VL+F ++K+ A +L E+ DG+++ IH D SQ RE A+ +F+ GK
Sbjct: 239 FLIGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVR 298
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
LIATDV ARG+D KG++ VINY+ P + Y+HRI
Sbjct: 299 ALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRI 334
>gi|449019765|dbj|BAM83167.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 627
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 138/257 (53%), Gaps = 15/257 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM------KKELVRSTDLSKFSCDILISTPLRLRLAIRR 54
LA+Q EC+K G + ++ +E +R+ + DI+++TP RL I R
Sbjct: 268 LASQIFSECRKFCYGTSIRAAVIYGGSENTREQLRAVE---NQVDIVVATPGRLLDFIDR 324
Query: 55 KKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEEL 111
+I L+ V +L LDEAD++ ++G I +V+ C P+ + +FSAT P ++ L
Sbjct: 325 GRIHLANVRFLTLDEADRMLDMG-FEPQIRQIVENCDMPAAGQRQTLMFSATFPREIQRL 383
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
A +HD + + VGR + ++ I Q++ F + + L S+ L+FV +K
Sbjct: 384 ASDFLHDYIFLAVGRVGSTTDFIVQRIEFCEDHLKREMLL--DLLNSIPGLTLVFVDTKR 441
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A L L G A IH D SQ +RE+++ FR+G+T +L+ATDV ARG+D V
Sbjct: 442 AADALEDFLLRHGYAASSIHGDRSQREREDSLAAFRSGQTPILVATDVAARGLDIPNVAH 501
Query: 232 VINYDFPDSGAAYIHRI 248
V+NY+ P + Y+HRI
Sbjct: 502 VVNYELPAAIDDYVHRI 518
>gi|149186749|ref|ZP_01865060.1| DNA and RNA helicase [Erythrobacter sp. SD-21]
gi|148829657|gb|EDL48097.1| DNA and RNA helicase [Erythrobacter sp. SD-21]
Length = 455
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 14/220 (6%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I +K L +VE L+LDEAD++ ++G + L+ I +V P
Sbjct: 125 GTDILVATPGRLLDLIDQKAFTLDKVEILILDEADQMLDLGFIHALRKISELV-----PD 179
Query: 95 IVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++LF SAT+P ++EL + V+V V ++T +E I Q L +E + L L
Sbjct: 180 DRQTLFFSATMPKQIQELVGKYCRNPVKVSVTPESTTAERIDQYLFMVQQDEKQTL-LEM 238
Query: 154 SFAESLNPP-----VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
+E P VLIF ++K + +L GI A IH + SQ QRE A+D+F+
Sbjct: 239 ILSERHQVPGKFERVLIFARTKHGCDRIVKKLGQSGIPANAIHGNKSQPQRERALDEFKR 298
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
KT +L+ATDV ARG+D GV+ V+NY+ P+ Y+HRI
Sbjct: 299 AKTPILVATDVAARGIDIPGVSHVLNYELPNVPEQYVHRI 338
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 139/253 (54%), Gaps = 11/253 (4%)
Query: 1 LATQTTRECKKLAKGN--KFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q + K+ AK K + ++ T + + +ILI+TP RL +++K ++
Sbjct: 103 LADQVFEDVKRYAKYTPVKSAVVFGGVDISSQTSILRAGVEILIATPGRLLDHVQQKNVN 162
Query: 59 LSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
LS + LVLDEAD++ ++G +L + ++ + K N LFSAT + +++LARS
Sbjct: 163 LSHTQILVLDEADRMLDMGFLPDLQRIVNLLPKQRQN-----LLFSATFSNDIKKLARSF 217
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
M D V V V R+N +E++KQ V+ E K A+ + VLIF +K A
Sbjct: 218 MKDPVTVEVARQNATAENVKQ-TVYRIEESEKNAAVEHLLKDRNQEQVLIFSNTKAGASR 276
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L +L G++A IH D +Q +R ++ F++G +L+ATDV ARG+ + + CVIN+
Sbjct: 277 LARQLERKGMKASAIHGDKTQAERMATLEAFKSGSIDILVATDVAARGLHIEELPCVINF 336
Query: 236 DFPDSGAAYIHRI 248
D P Y+HRI
Sbjct: 337 DLPFVAEDYVHRI 349
>gi|424043824|ref|ZP_17781447.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
gi|408888353|gb|EKM26814.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
Length = 430
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I + + ++ +E+LV DEAD++ ++G N ++ I ++ ++P
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVDTDPQ 181
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
I+ +FSAT + LAR I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 182 IM--MFSATTSTQLNVLARDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSEL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V+
Sbjct: 239 IGRKNWKQVLVFVNYKETANDVVKELKLDGIKAVVCHGDRAQSARRRALEEFKTGKVRVM 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D + + V+NYD P Y+HRI
Sbjct: 299 VATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|205375157|ref|ZP_03227948.1| DEAD-box ATP dependent DNA helicase [Bacillus coahuilensis m4-4]
Length = 398
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 137/256 (53%), Gaps = 14/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--------KKELVRSTDLSKFSCDILISTPLRLRLAI 52
LA Q T E KKL + ++ ++ +K+L + L + I+++TP RL +
Sbjct: 82 LAIQVTDELKKLVELEFPEVNVLAVYGGQDVEKQLHK---LETRNIHIVVATPGRLLDHM 138
Query: 53 RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELA 112
RR IDLS ++ L+LDEAD++ +G L ++ +++A P+ +LFSAT+ V LA
Sbjct: 139 RRGTIDLSELDMLILDEADQMLHIG-FLPEVEQIIEATP-PTRQTALFSATISKDVRTLA 196
Query: 113 RSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+ V V K E I+Q V ++ KL AL + E+ +IF ++ R
Sbjct: 197 KRYQQQPYTVQVKDKERLVEEIEQ-FVVETTDRKKLQALVEVIKETQPFMGIIFCRTIRR 255
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
+L+ EL G +H DLSQ +REN + FR K +LIATDV ARG+D +GV V
Sbjct: 256 VSKLHMELKAKGFLVDELHGDLSQAKRENVMKRFRDAKIQLLIATDVAARGLDVEGVTHV 315
Query: 233 INYDFPDSGAAYIHRI 248
NYD P +YIHRI
Sbjct: 316 YNYDIPQDVESYIHRI 331
>gi|160380616|sp|A6ZUA1.1|DBP3_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|151943729|gb|EDN62039.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 234 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIKNIIRETDASKRQTLM 292
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M++ ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 293 FTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKY 352
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 353 HSGPKKNEKVLIFALYKKEAARVERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNL 412
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 413 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 447
>gi|323492253|ref|ZP_08097411.1| putative ATP-dependent RNA helicase RhlE [Vibrio brasiliensis LMG
20546]
gi|323313566|gb|EGA66672.1| putative ATP-dependent RNA helicase RhlE [Vibrio brasiliensis LMG
20546]
Length = 427
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN-PSI 95
D+L++TP RL I + L+ +E+LV DEAD++ ++G + I+ ++ + P
Sbjct: 124 GVDVLVATPGRLIEHIELNNVSLANLEFLVFDEADRMLDMG-FIASIEKIMSGVTTKPQT 182
Query: 96 VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+ LFSAT + +LA I+ RV V R+N +++I +V+ +E K L +
Sbjct: 183 M--LFSATFSTQMNKLASEILRQPKRVSVARENVTADTIAH-VVYPVEQERKRELLSELI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV KE A EL EL DGI+A + H D +Q+ R A+++F+ GK V+I
Sbjct: 240 GRKNWKQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQSARRRALEEFKTGKARVMI 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATDV ARG+D + + V+N+D P Y+HRI
Sbjct: 300 ATDVAARGLDIQNLPHVVNFDMPFLAEDYVHRI 332
>gi|238749853|ref|ZP_04611357.1| ATP-dependent RNA helicase rhlE [Yersinia rohdei ATCC 43380]
gi|238711782|gb|EEQ03996.1| ATP-dependent RNA helicase rhlE [Yersinia rohdei ATCC 43380]
Length = 450
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 RRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|421750235|ref|ZP_16187502.1| helicase, partial [Cupriavidus necator HPC(L)]
gi|409770743|gb|EKN53287.1| helicase, partial [Cupriavidus necator HPC(L)]
Length = 423
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 132/224 (58%), Gaps = 11/224 (4%)
Query: 31 TDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC 90
TD + +IL++TP RL +++K ++LS+V+ LVLDEAD++ ++G L P ++
Sbjct: 139 TDALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADRMLDMGFL-----PDLQRI 193
Query: 91 SN--PSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGS-E 144
N P+ ++L FSAT +++LA S +H V + V R N+A+E+++Q + V G +
Sbjct: 194 INLLPAKRQTLLFSATFSPEIKKLAASYLHQPVTIEVARSNSANENVRQTVYQVQDGQKQ 253
Query: 145 EGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
E + L+Q + L+ ++FV SK L L +GI A IH D +QT+R ++
Sbjct: 254 EAVVHLLKQRADQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLE 313
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F+ G L+ATDV ARG+D + CVIN+D P + Y+HRI
Sbjct: 314 GFKQGTIDALVATDVAARGLDIADMPCVINFDLPFNAEDYVHRI 357
>gi|296103277|ref|YP_003613423.1| putative ATP-dependent RNA helicase RhlE [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057736|gb|ADF62474.1| putative ATP-dependent RNA helicase RhlE [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 450
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L VE LVLDEAD++ ++G + H V A P
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNVEILVLDEADRMLDMGFI--HDIRRVLAKLPPR 180
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LSHM 239
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G VL
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVL 299
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|269963602|ref|ZP_06177925.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831615|gb|EEZ85751.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 430
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I + + ++ +E+LV DEAD++ ++G N ++ I ++ ++P
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVANIEFLVFDEADRILDMGFINAVRKI--MLDVDTDPQ 181
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
I+ +FSAT + LAR I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 182 IM--MFSATTSTQLNVLARDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSEL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V+
Sbjct: 239 IGRKNWKQVLVFVNYKETANDVVKELKLDGIKAVVCHGDRAQSARRRALEEFKTGKVRVM 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D + + V+NYD P Y+HRI
Sbjct: 299 VATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|163755350|ref|ZP_02162470.1| putative RNA helicase dead-box protein [Kordia algicida OT-1]
gi|161324770|gb|EDP96099.1| putative RNA helicase dead-box protein [Kordia algicida OT-1]
Length = 591
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K I+++TP R++ I R+ +D+S++EY VLDEAD++ +G + I ++ +
Sbjct: 119 KKGAQIVVATPGRMQDMINRRMVDISKIEYCVLDEADEMLNMG-FYEDITSILSHTPDDK 177
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P V +A+ MH + VG +N+ S+S++ + +A S + LAL++
Sbjct: 178 ST-WLFSATMPREVATIAKKFMHTPQEITVGSRNSGSDSVRHEF-YAVSGRDRYLALKR- 234
Query: 155 FAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
A++ NP + ++F ++K + + +L DG A IH DLSQ QR+ + FR +
Sbjct: 235 LADA-NPDIFSVVFCRTKRDTQNVAEKLIEDGYNAAAIHGDLSQNQRDLVMKSFRTRQIQ 293
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+L+ATDV ARG+D + VINY PD Y HR
Sbjct: 294 MLVATDVAARGIDVDDITHVINYQLPDEIETYTHR 328
>gi|395490699|ref|ZP_10422278.1| DEAD/DEAH box helicase [Sphingomonas sp. PAMC 26617]
Length = 485
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 6/218 (2%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
D+S+ DIL++TP RL I ++ + L+ +E LVLDEAD++ ++G + + +VK
Sbjct: 125 DMSR-GVDILVATPGRLLDLIEQRMVSLAMLEILVLDEADQMLDLG-FIHALRKIVKML- 181
Query: 92 NPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
P + ++LF SAT+P+ + ELA ++D V V ++ +E ++Q + F E + L
Sbjct: 182 -PRVRQTLFFSATMPNAIRELADQFLNDPATVKVAPVSSTAERVEQYVYFVNQGEKQAL- 239
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L A+ L+F ++K A + L +GI A IH + SQ QRE A+ +F+ GK
Sbjct: 240 LTMLLADGAIERCLVFTRTKHGADRVVKLLGANGIPANAIHGNKSQPQRERALGEFKTGK 299
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D GV+ V N++ P+ Y+HRI
Sbjct: 300 VKVLVATDIAARGIDVSGVSHVFNFELPNVAEQYVHRI 337
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 128/215 (59%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DILI+TP RL I + ++ L + + VLDEAD++ ++G + ++ + P++ P+
Sbjct: 150 GVDILIATPGRLLDLIGQDEVRLESLTHFVLDEADRMLDMGFIADIRRLLPML-----PA 204
Query: 95 IVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++LF SAT+P + L+ SI+HD RV V ++ +++ Q++ F E K L +
Sbjct: 205 ERQTLFFSATMPKDIVALSGSILHDPARVEVTPVSSTVDTVDQRIYFVEKPEKKGLLISL 264
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
ES + VL+F ++K A + L GIR+ IH + SQ QR+ A+ DF++GK V
Sbjct: 265 LKQES-DKSVLVFSRTKHGADSISRILRKAGIRSEAIHGNKSQGQRQRALGDFKSGKIQV 323
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++ATD+ ARG+D +N VINYD PD Y+HRI
Sbjct: 324 MVATDIAARGIDINELNMVINYDLPDVAETYVHRI 358
>gi|299117107|emb|CBN73878.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 467
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 13/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q EC K + + + + + + DLS+ +I+I+TP RL + K
Sbjct: 146 LAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSR-GVEIVIATPGRLIDLLESGKT 204
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G +P +++ + P ++SAT P VE LAR
Sbjct: 205 NLRRVTYLVLDEADRMLDMG-----FEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARD 259
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP-VLIFVQSKERA 173
+ + +V VG ++ Q++V + GK L + E N VLIFV++K+
Sbjct: 260 FLRNYYQVTVGSLELSANKDIQQVVEIVEDFGKYRVLAKHLQEHNNAGRVLIFVETKKGC 319
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
L L +G A IH D +Q++R+ + DF+ G++ +L+ATDV ARG+D K + VI
Sbjct: 320 DALTRSLRHEGWPALAIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVI 379
Query: 234 NYDFPDSGAAYIHRI 248
N+DFP +Y+HRI
Sbjct: 380 NFDFPKEMESYVHRI 394
>gi|300779365|ref|ZP_07089223.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504875|gb|EFK36015.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 434
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 130/215 (60%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL++TP RL I + I L +E VLDEAD++ ++G + + V+K P
Sbjct: 120 KKGVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMG-FVHDVKRVIKLL--PQ 176
Query: 95 IVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++LF SAT+P +++LA SI+++ V+V V ++ +++IKQ + F ++ KL L
Sbjct: 177 RRQTLFFSATMPGEIQKLANSILNNPVKVEVTPVSSTADTIKQSVYFV-EKDNKLNLLSH 235
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ VL+F ++K A ++ +L D I A IH + SQ R+NA+++F++GKT V
Sbjct: 236 ILKNDISDSVLVFARTKHGADKISRKLQKDNISAEAIHGNKSQNARQNALNNFKSGKTRV 295
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + VIN++ D Y+HRI
Sbjct: 296 LVATDIAARGIDIDELKFVINFELSDVSETYVHRI 330
>gi|255089378|ref|XP_002506611.1| predicted protein [Micromonas sp. RCC299]
gi|226521883|gb|ACO67869.1| predicted protein [Micromonas sp. RCC299]
Length = 639
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI- 95
CD+LI+TP RL + R KI L R++YL LDEAD++ ++G I +V+ P
Sbjct: 312 GCDMLIATPGRLIDLVDRAKISLERIQYLALDEADRMLDMG-FEPQIRQIVEQRGMPPPG 370
Query: 96 --VRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT P ++ +A + D + + VGR ++ I Q + + S K L
Sbjct: 371 DRQTMLFSATFPKEIQRMASDFLQDYIFLTVGRVGSSHTLITQTIEYVQSYNDKCQML-M 429
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ L+FV++K A +L L+ G + IH D +Q +RE A+ FR+GKT +
Sbjct: 430 DLVHAVQGLTLVFVETKRGADQLEDWLSQQGFPSTSIHGDRTQQEREWALKSFRSGKTPI 489
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN+D P Y+HRI
Sbjct: 490 LVATDVAARGLDIPHVTHVINFDLPSDVDDYVHRI 524
>gi|145345795|ref|XP_001417385.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577612|gb|ABO95678.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 480
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 119/217 (54%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL I R KI LSRV+YL LDEAD++ ++G I +V P
Sbjct: 177 GCDILVATPGRLIDLIDRAKISLSRVQYLALDEADRMLDMG-FEPQIRQIVDERDMPRCG 235
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKL--VFAGSEEGKLLAL 151
LFSAT P ++ +A + D V + VGR ++ I Q + V + E+ +L
Sbjct: 236 ERQTMLFSATFPREIQRMASDFLDDYVFLTVGRVGSSHALITQSVERVTSYHEKSNMLL- 294
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
E++ L+FV++K A +L L +G A IH D +Q +RE A+ FRAGKT
Sbjct: 295 --DLVEAVPGLTLVFVETKRGADQLEDFLYQNGKPATSIHGDRTQQEREAALKSFRAGKT 352
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN+D P Y HRI
Sbjct: 353 PILVATDVAARGLDIPHVTHVINFDLPSDIDDYTHRI 389
>gi|392545351|ref|ZP_10292488.1| ATP-dependent RNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 432
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL IR + L++V+YLVLDEAD++ ++G + + V+ S +
Sbjct: 121 GVDILVATPGRLLDLIRLGAVSLAQVKYLVLDEADRMLDMG-FVTDMQKVIDMVSEERQL 179
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT P V++ A+ ++ + V ++NT +E+++ +V+ ++ K L +
Sbjct: 180 -LLFSATFPTAVKQFAKQVLREPKLVQAAKENTTAETVRH-VVYPVEQKRKQELLSELIG 237
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
+ VL+FV K+ A +L EL DGI A V H D SQ R A+ +F+ GK VL+A
Sbjct: 238 KKNWLQVLVFVNMKDDADQLVKELELDGISATVCHGDKSQGARRRALREFKEGKVRVLVA 297
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T+V ARG+D G+ VIN+D P Y+HRI
Sbjct: 298 TEVAARGIDIDGLPRVINFDLPYLAEDYVHRI 329
>gi|354722649|ref|ZP_09036864.1| ATP-dependent RNA helicase RhlE [Enterobacter mori LMG 25706]
Length = 461
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|326505994|dbj|BAJ91236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 685
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 140/262 (53%), Gaps = 19/262 (7%)
Query: 1 LATQTTRECKKLAKGNKFQ---IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LATQ E KK A ++ + + + + DL + C +L++TP RL + R KI
Sbjct: 294 LATQIYDEAKKFAYRSRVRPCVVYGGSHVMDQIRDLEQ-GCHLLVATPGRLVDMLERGKI 352
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARS 114
L YLVLDEAD++ ++G I +V+ S P +FSAT P ++ LAR
Sbjct: 353 GLDFCRYLVLDEADRMLDMG-FETQIRRIVEKDSMPPPGDRQTLMFSATFPKEIQMLARD 411
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL------RQSFAESLNPPVLIF 166
+ + + + +GR + SE+I QK+V+ + LL L R AESL +L+F
Sbjct: 412 FLDNYIFLAIGRVGSTSENITQKIVWVEDRNKRSYLLDLLNATPIRSQPAESL---ILVF 468
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V++K+ A L L +G IH D +Q +RE+A+ FR+G T VL+AT V ARG+D
Sbjct: 469 VETKKGADSLEEFLYSNGYPVTSIHGDRTQREREDALKSFRSGNTPVLVATAVAARGLDI 528
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
V VINYD P Y+HRI
Sbjct: 529 PHVTHVINYDLPSDVEEYVHRI 550
>gi|302789710|ref|XP_002976623.1| hypothetical protein SELMODRAFT_151274 [Selaginella moellendorffii]
gi|300155661|gb|EFJ22292.1| hypothetical protein SELMODRAFT_151274 [Selaginella moellendorffii]
Length = 595
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 26/266 (9%)
Query: 1 LATQTTRECKKLAKGNKF---------QIKLMKKELVRSTDLSKFSCDILISTPLRLRLA 51
L+ Q E KK A QI L +EL R DIL++TP RL
Sbjct: 237 LSAQIHDEAKKFAYRTGLKVVVAYGGAQISLQMRELERG-------VDILVATPGRLHDL 289
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFV 108
+ R ++ LS ++YL LDEAD++ ++G I +V+ P + LFSAT P +
Sbjct: 290 MERGRVALSMIKYLALDEADRMLDMG-FEPQIRKIVETSDMPPPGQRQTMLFSATFPRTI 348
Query: 109 EELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-----RQSFAESLNPP- 162
+ LA +H+ + + VGR ++++ I Q++ E + L + +++ + PP
Sbjct: 349 QSLAADFLHNYIFLAVGRVGSSTDLIVQRVERVQEAEKRSLLMDIIHGQKAIGANGQPPL 408
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
+L+FV++K A L L G A IH D +Q +RE A+ FR G T +L+ATDV AR
Sbjct: 409 MLVFVETKRGADALEDWLIRSGFPATTIHGDRTQPEREQALRCFRTGMTPILVATDVAAR 468
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+D V VINYD P Y+HRI
Sbjct: 469 GLDIPHVAHVINYDLPSDIDDYVHRI 494
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK AK ++ + + + K C+I+++TP RL ++ K +
Sbjct: 316 LAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALA 375
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P V++ P LFSAT+P VE+LAR I
Sbjct: 376 MLRATYLVLDEADRMFDLG-----FEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREI 430
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + E ++ L+F K
Sbjct: 431 LSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQGDTLVFASKKATVD 490
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L G + +H D Q+ R + + F++G VLIATDV ARG+D K + V+N
Sbjct: 491 EIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVN 550
Query: 235 YDFPDSGAAYIHRI 248
+D ++HRI
Sbjct: 551 FDIAKDMDMHVHRI 564
>gi|55507560|gb|AAV52794.1| unknown [Homo sapiens]
Length = 362
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 2/214 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C +L++TP RL + R KI L +YLVLDEAD++ ++G + V + P V
Sbjct: 33 GCHLLVATPGRLADMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV 92
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 93 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL 152
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A + L+FV++K+ A L L +G IH D SQ RE A+ FR+GK+ +L
Sbjct: 153 NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPIL 212
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 213 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 246
>gi|403415883|emb|CCM02583.1| predicted protein [Fibroporia radiculosa]
Length = 640
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 305 GCDLLSATPGRLVDLIERGRISLANIQYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQ 363
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFA--GSEEGKLLAL 151
+FSAT P ++ LAR M D V + VGR + SE+I QK+ + G + LL +
Sbjct: 364 ARQTLMFSATFPRDIQVLARDFMKDYVFLSVGRVGSTSENITQKIEYVEDGDKRSVLLDV 423
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L L+FV++K A L L + + A IH D +Q +RE A+ F++G+T
Sbjct: 424 LSAHDPGL---TLVFVETKRMADMLSDFLLTNHLPATSIHGDRTQREREMALQTFKSGRT 480
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 481 PILVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRI 517
>gi|347540439|ref|YP_004847864.1| ATP-dependent RNA helicase [Pseudogulbenkiania sp. NH8B]
gi|345643617|dbj|BAK77450.1| ATP-dependent RNA helicase [Pseudogulbenkiania sp. NH8B]
Length = 438
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 128/231 (55%), Gaps = 14/231 (6%)
Query: 18 FQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG 77
+QI+ M + + DI+++TP RL +R +ID SR+E L+LDEAD++ ++G
Sbjct: 116 YQIRAMARPV-----------DIMVATPGRLMDHMRSGRIDFSRLEMLILDEADRMLDMG 164
Query: 78 NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK 137
++ I+ +VKA + S LFSATL V +LA+ + D R+ + R+ T +I++
Sbjct: 165 -FIEDIETIVKATPD-SRQTVLFSATLDGTVGKLAQKLTRDPQRIEIAREETGG-NIEEH 221
Query: 138 LVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQT 197
L++A K L E+ +IF +K ++EL +L+ G A +H D+ Q
Sbjct: 222 LLYADDNRHKERLLDHILKEAGFDQAVIFTATKIGSEELADKLSDQGYAAACLHGDMPQN 281
Query: 198 QRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R ++D R G+ +L+ATDV ARG+D + V+NYD P Y+HRI
Sbjct: 282 WRNRTLNDLRRGRVRILVATDVAARGIDVPTITHVVNYDLPKQAEDYVHRI 332
>gi|224824946|ref|ZP_03698052.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602617|gb|EEG08794.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 438
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 128/231 (55%), Gaps = 14/231 (6%)
Query: 18 FQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG 77
+QI+ M + + DI+++TP RL +R +ID SR+E L+LDEAD++ ++G
Sbjct: 116 YQIRAMARPV-----------DIMVATPGRLMDHMRSGRIDFSRLEMLILDEADRMLDMG 164
Query: 78 NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQK 137
++ I+ +VKA + S LFSATL V +LA+ + D R+ + R+ T +I++
Sbjct: 165 -FIEDIETIVKATPD-SRQTVLFSATLDGTVGKLAQKLTRDPQRIEIAREETGG-NIEEH 221
Query: 138 LVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQT 197
L++A K L E+ +IF +K ++EL +L+ G A +H D+ Q
Sbjct: 222 LLYADDNRHKERLLDHILKEAGFDQAVIFTATKIGSEELADKLSDQGYAAACLHGDMPQN 281
Query: 198 QRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
R ++D R G+ +L+ATDV ARG+D + V+NYD P Y+HRI
Sbjct: 282 WRNRTLNDLRRGRVRILVATDVAARGIDVPTITHVVNYDLPKQAEDYVHRI 332
>gi|351066214|gb|AEQ39080.1| DEAD/DEAH box helicase domain-containing protein [Oceanimonas
doudoroffii]
Length = 458
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D++I+TP RL I + L+ VE++VLDEAD++ ++G I+ V+K +
Sbjct: 124 GTDLVIATPGRLMEHITLGNVALTDVEFVVLDEADRMLDMG----FINDVIKLMQLTAAK 179
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R LFSAT V ELA ++H+ ++ V R N+ ++++ Q +V+ E K+ Q
Sbjct: 180 RQTLLFSATTSPAVNELAHKVLHNHQQIRVTRVNSTADTV-QHVVYPVEEGRKIELFEQL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
AE+ VL+F +KE+A L L + I A V H D SQ R A+ DF++GK VL
Sbjct: 239 LAENNWFQVLVFTSTKEQADRLQAGLKKNKIEAAVCHGDKSQGNRRRAIADFKSGKLQVL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IAT+V ARG+D +G++ V+N++ P Y+HRI
Sbjct: 299 IATEVAARGLDIQGLDHVVNFNLPYLPEDYVHRI 332
>gi|347524843|ref|YP_004831591.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
gi|345283802|gb|AEN77655.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 27782]
Length = 497
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGN--KFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +L K K Q+ ++ R L K IL+ TP RL I RK +D
Sbjct: 81 LAIQTQEELYRLGKDKRAKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHINRKTVD 140
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
LS V+ LVLDEAD++ ++G L+ I+ ++K P ++L FSAT+P + + MH
Sbjct: 141 LSHVKTLVLDEADEMLDMG-FLEDIEAIIKNV--PEERQTLLFSATMPKTIRSIGEKFMH 197
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ V + K ++ + Q V A E K + + ++F ++K R EL
Sbjct: 198 EPQVVKIKAKELTTDLVDQYFVKAREYE-KFDIMTRILDVQAPELTIVFGRTKRRVDELS 256
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L G A IH DL+Q +R N + F+ G+ +L+ATDV ARG+D GV V NYD
Sbjct: 257 KGLEARGYNAAGIHGDLTQQRRMNILKKFKEGRLDILVATDVAARGLDISGVTHVYNYDI 316
Query: 238 PDSGAAYIHRI 248
P +Y+HRI
Sbjct: 317 PQDPESYVHRI 327
>gi|222617918|gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
Length = 468
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 13/223 (5%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
+ +KF +I+I+TP RL I +L RV YLVLDEAD++ ++G +P +K
Sbjct: 183 EATKFGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMG-----FEPQIKKIV 237
Query: 92 N---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEE- 145
+ P +SAT P VE+LAR+ + D +VI+G + A+ +I Q + + + S++
Sbjct: 238 SQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKY 297
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+ L + + +LIF+ +K+ ++ +L DG A IH D SQ +R+ + +
Sbjct: 298 NKLVNLLEDIMDGSR--ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 355
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F++GK+ ++ ATDV ARG+D K V VINYDFP S Y+HRI
Sbjct: 356 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 398
>gi|390947824|ref|YP_006411584.1| DNA/RNA helicase [Alistipes finegoldii DSM 17242]
gi|390424393|gb|AFL78899.1| DNA/RNA helicase, superfamily II [Alistipes finegoldii DSM 17242]
Length = 502
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 14/218 (6%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSN 92
D++I+TP R+ I+ IDLS VE L+LDEAD++ ++G +++K + + K
Sbjct: 124 MGSDVVIATPGRMISHIQNSGIDLSHVECLILDEADRMLDMGFSEDIMKIVSYMPKERQT 183
Query: 93 PSIVRSLFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
+FSATLP + ELA++I+ + V + + + N E+I Q + E KL
Sbjct: 184 -----IMFSATLPPKIRELAKTILRNPAEVNIAISKPN---EAIDQS-AYVCYENQKLDI 234
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+R+ FAE +IF SK + KEL L + +HSDL Q QRE + DF+ K
Sbjct: 235 IREMFAEPTESKTIIFSSSKMKVKELAHTLKRMKLNVAAMHSDLEQAQREEVMLDFKNNK 294
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATD++ARG+D + + VINYD P YIHRI
Sbjct: 295 VSILVATDIVARGIDIEDIGLVINYDVPHDPEDYIHRI 332
>gi|304392205|ref|ZP_07374147.1| ATP-dependent RNA helicase RhlE [Ahrensia sp. R2A130]
gi|303296434|gb|EFL90792.1| ATP-dependent RNA helicase RhlE [Ahrensia sp. R2A130]
Length = 536
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 128/214 (59%), Gaps = 7/214 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
D+L++TP RL + RK + L +YLVLDEAD++ ++G + L+ I+P++ P
Sbjct: 157 GTDVLVATPGRLLDLVDRKAVKLDTAKYLVLDEADQMLDMGFIHALRRIEPLL---GRPR 213
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P VEEL++S + + R+ V R A++ ++Q + + +++ KL L +
Sbjct: 214 QT-LLFSATMPKLVEELSKSYLTNPERIEVARAGKAADKVRQSVHYIATKD-KLNLLSKL 271
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
AE + L+F ++K ++L +L G A IH + SQ QR+ A+ +F++G +L
Sbjct: 272 LAERPDDLSLVFGRTKHGCEKLMKQLVAQGFAAASIHGNKSQGQRDRALREFKSGAVRIL 331
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D V+ V N++ P+ Y+HRI
Sbjct: 332 VATDVAARGIDIPAVSHVYNFNLPEVPENYVHRI 365
>gi|302782918|ref|XP_002973232.1| hypothetical protein SELMODRAFT_267628 [Selaginella moellendorffii]
gi|300158985|gb|EFJ25606.1| hypothetical protein SELMODRAFT_267628 [Selaginella moellendorffii]
Length = 597
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 26/266 (9%)
Query: 1 LATQTTRECKKLAKGNKF---------QIKLMKKELVRSTDLSKFSCDILISTPLRLRLA 51
L+ Q E KK A QI L +EL R DIL++TP RL
Sbjct: 239 LSAQIHDEAKKFAYRTGLKVVVAYGGAQISLQMRELERG-------VDILVATPGRLHDL 291
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFV 108
+ R ++ LS ++YL LDEAD++ ++G I +V+ P + LFSAT P +
Sbjct: 292 MERGRVALSMIKYLALDEADRMLDMG-FEPQIRKIVETSDMPPPGQRQTMLFSATFPRTI 350
Query: 109 EELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL-----RQSFAESLNPP- 162
+ LA +H+ + + VGR ++++ I Q++ E + L + +++ + PP
Sbjct: 351 QSLAADFLHNYIFLAVGRVGSSTDLIVQRVERVQEAEKRSLLMDIIHGQKAIGANGQPPL 410
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
+L+FV++K A L L G A IH D +Q +RE A+ FR G T +L+ATDV AR
Sbjct: 411 MLVFVETKRGADALEDWLIRSGFPATTIHGDRTQPEREQALRCFRTGMTPILVATDVAAR 470
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+D V VINYD P Y+HRI
Sbjct: 471 GLDIPHVAHVINYDLPSDIDDYVHRI 496
>gi|390945021|ref|YP_006408782.1| DNA/RNA helicase [Belliella baltica DSM 15883]
gi|390418449|gb|AFL86027.1| DNA/RNA helicase, superfamily II [Belliella baltica DSM 15883]
Length = 406
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 134/224 (59%), Gaps = 9/224 (4%)
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
+ T+ K DIL++TP RL I +K IDL ++++ VLDEAD++ ++G + + ++
Sbjct: 113 LHQTNALKRGVDILVATPGRLLDLINQKFIDLRQLQFFVLDEADRMLDMG-FIHDVKKII 171
Query: 88 KACSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG-SEE 145
P+ ++LF SAT+P +++LA ++ + +V V ++ + I Q+L + +++
Sbjct: 172 ALL--PAKRQTLFFSATMPPEIQKLADVLLRNPSKVEVTPPSSTVDKIDQRLYYTNKNDK 229
Query: 146 GKLLALRQSFAESLN-PPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
KLL Q ++ L+F ++K A ++ LA DG+RA IH + SQ R+NA+
Sbjct: 230 PKLL---QHLLDAYRIRTALVFTRTKHGADKVVKFLARDGVRAAAIHGNKSQNARQNALK 286
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DF+AGK VL+ATD+ ARG+D + VINYD P+ Y+HRI
Sbjct: 287 DFKAGKLQVLVATDIAARGIDIDELAHVINYDLPNVSETYVHRI 330
>gi|209879417|ref|XP_002141149.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556755|gb|EEA06800.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 590
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 10/212 (4%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 98
++++TP RL +R+KK+ L + Y +DEAD+L E G + V+ + R
Sbjct: 278 MIVATPGRLADMLRKKKVTLYQCRYFCMDEADRLTEAG-----FEEAVRYIFDNFHERRQ 332
Query: 99 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+P +E R+ + D + V VGR + ++ Q+L + +E +L + QS
Sbjct: 333 TVLFSATMPQKTQEFTRTALVDPIVVNVGRAGATTLNVLQELEYV-RQECRLPHILQSLQ 391
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
++ P VLIF ++K+ E++ L G++A IHS LSQ QR ++V+ FR G VLI
Sbjct: 392 KTA-PRVLIFCENKKDVDEIHEYLLLKGVKAAAIHSGLSQEQRRDSVEQFRLGLKDVLIG 450
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ++G+DF ++ VINYD P Y+HRI
Sbjct: 451 TDVASKGLDFPNIHHVINYDMPKEIENYVHRI 482
>gi|190892959|ref|YP_001979501.1| ATP-dependent RNA helicase [Rhizobium etli CIAT 652]
gi|190698238|gb|ACE92323.1| ATP-dependent RNA helicase protein [Rhizobium etli CIAT 652]
Length = 565
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 16 NKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFE 75
NK Q++L K D+L++TP RL + R+ I L+ V YLVLDEAD++ +
Sbjct: 137 NKQQLQLEK------------GTDVLVATPGRLLDLVNRRAITLTTVRYLVLDEADQMLD 184
Query: 76 VG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASES 133
+G + L+ I +V LFSAT+P + +LA + D V+V V A++
Sbjct: 185 LGFVHDLRKIAKLVPKKRQ----TMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADK 240
Query: 134 IKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSD 193
++Q + F + K LR+S E+ + ++F+++K A++L L G IH +
Sbjct: 241 VEQYVHFVAGKNDKTELLRKSLTENPDGRAIVFLRTKHGAEKLMKHLDNIGYSVASIHGN 300
Query: 194 LSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
SQ QRE A+ FR G LIATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 301 KSQGQRERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRI 355
>gi|410625113|ref|ZP_11335901.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
gi|410155244|dbj|GAC22670.1| ATP-dependent RNA helicase rhlB [Glaciecola mesophila KMM 241]
Length = 426
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+ISTP RL + K ++L+ VE++VLDEAD++ ++G + + + S
Sbjct: 122 KAGVDIVISTPGRLLEHMTLKNVELANVEFVVLDEADRMLDMGFIADVRQMLAQITSAHQ 181
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+ +
Sbjct: 182 TL--LFSATISPTVNELAHKLLKNHQEIRATQLNSAADTV-QHVMYPVSEEDKIRLFKTL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
AE VL+F +KE+A +L L I A V H+D SQ R A+ DF++ K VL
Sbjct: 239 LAEQNWYQVLVFTSTKEQADKLMAALKTSKIDAAVCHADKSQGARRRAIADFKSAKLQVL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IAT+V ARG+D +G++ V+NY+ P Y+HRI
Sbjct: 299 IATEVAARGLDIQGLDHVVNYNLPYLPEDYVHRI 332
>gi|392307510|ref|ZP_10270044.1| ATP-dependent RNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 435
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 137/250 (54%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q R C++ A+ + + + + + K + DI+++TP RL IR I
Sbjct: 86 LAEQIGRNCEEFAQHTELKTVSLFGGVNTTGQADKLAAGADIVVATPGRLLDHIRLGNIS 145
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L+ V++LVLDEAD++ ++G + I V++ + LFSAT P +++ A S++
Sbjct: 146 LANVQHLVLDEADRMLDMG-FITDIQQVIELTHTDKQIL-LFSATFPPAMKQFAGSVLRH 203
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V V +NT +E+++ +V+ + K L + + VL+FV K+ A +L
Sbjct: 204 PKYVQVTPENTTAETVRH-VVYPVEQSRKQELLSELIGKKNWQQVLVFVNMKDVADDLVN 262
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL DGI A V H D +Q R A+ +F+ GK VL+AT+V ARG+D +G+ V+NYD P
Sbjct: 263 ELMLDGIPAIVCHGDKTQGARRRALREFKEGKVRVLVATEVAARGIDIEGLPRVVNYDLP 322
Query: 239 DSGAAYIHRI 248
Y+HRI
Sbjct: 323 YLAEDYVHRI 332
>gi|375263508|ref|YP_005025738.1| ATP-dependent RNA helicase [Vibrio sp. EJY3]
gi|369843935|gb|AEX24763.1| ATP-dependent RNA helicase [Vibrio sp. EJY3]
Length = 429
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + + ++ +E+LV DEAD++ ++G + ++ ++P I+
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVANLEFLVFDEADRILDMGFIHAVRKIMLDVDTDPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT + LA+ I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 184 --MFSATTSSQLNLLAKDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A E+ EL DGI+A V H D +Q+ R A+++F++GK V++A
Sbjct: 241 RKNWQQVLVFVNYKETANEVVKELKLDGIKAAVCHGDRAQSARRRALEEFKSGKVRVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + V+NYD P Y+HRI
Sbjct: 301 TDVAARGLDIADLPHVVNYDMPFLAEDYVHRI 332
>gi|321469269|gb|EFX80250.1| putative germ-line specific RNA helicase vasa protein [Daphnia
pulex]
Length = 761
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 137/255 (53%), Gaps = 11/255 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q RE K A + + L+ V S S C+IL++T RL+ + R D
Sbjct: 416 LAIQIHREAYKFAYNSVLKSVLIYGGTVSSNQRSNLQAGCNILVATTGRLKDFLDRGVFD 475
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDFVEELARSI 115
S V++L+LDEAD++ ++G I+ + + P I R+ +FSAT P+ V+ LA +
Sbjct: 476 FSAVKFLILDEADRMLDMG-FGPDIEKIAAHPTMPPKGIRRTCMFSATFPEEVQALAANY 534
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQSKERA 173
M D + V G + ++Q+ E KL+ + ES +++FV SK+ A
Sbjct: 535 MEDYIFVTTGTVGGTNPDVQQEFFQCARNEKRTKLMETLRGLGESK---IIVFVDSKKTA 591
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+ L + I+A IH D Q+QRE A+ D ++GK VL+AT+V ARG+D +GVN VI
Sbjct: 592 DFVAVYLCNNDIQATSIHGDRLQSQREEALRDLKSGKRNVLVATNVAARGLDIEGVNYVI 651
Query: 234 NYDFPDSGAAYIHRI 248
NYD P Y+HRI
Sbjct: 652 NYDLPSDIEEYVHRI 666
>gi|164658197|ref|XP_001730224.1| hypothetical protein MGL_2606 [Malassezia globosa CBS 7966]
gi|159104119|gb|EDP43010.1| hypothetical protein MGL_2606 [Malassezia globosa CBS 7966]
Length = 653
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ V +LVLDEAD++ ++G I +V P ++
Sbjct: 315 GCDMLSATPGRLVDLIERGRISLANVRFLVLDEADRMLDMG-FEPQIRRIVLGEDMPGVM 373
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LA+ + + V + VGR + SE+I QK+ + + + + L
Sbjct: 374 DRQTLMFSATFPQNIQMLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDRDKQSMLLDV 433
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A + LIFV++K A L L + I A IH D +Q +RE A+D FR+G+T +
Sbjct: 434 LAAMPTSGLTLIFVETKRMADMLSDFLIYSNIAATSIHGDRTQREREYALDLFRSGRTPI 493
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 494 LVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRI 528
>gi|303288181|ref|XP_003063379.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455211|gb|EEH52515.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 513
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL + R KI LS V YL LDEAD++ ++G I +V+ P
Sbjct: 181 GCDILVATPGRLIDLVDRAKISLSEVRYLALDEADRMLDMG-FEPQIRQIVEQRDMPPTG 239
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT P ++ +A + D + + VGR ++ I Q++ + S E K L
Sbjct: 240 ERQTMLFSATFPREIQRMASDFLKDYIFLTVGRVGSSHTLITQQIEYLRSYEDKKSML-M 298
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ L+FV++K A +L L+ +G + IH D +Q +RE A+ FR+G+T +
Sbjct: 299 DLVHAVKGLTLVFVETKRGADQLEDWLSREGFPSTSIHGDRTQQEREYALKSFRSGRTPI 358
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN+D P Y+HRI
Sbjct: 359 LVATDVAARGLDIPHVTHVINFDLPSDIDDYVHRI 393
>gi|357454677|ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|124360402|gb|ABN08415.1| Helicase, C-terminal [Medicago truncatula]
gi|355486667|gb|AES67870.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355502353|gb|AES83556.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 499
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 141/257 (54%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K ++ + + + + DL K +I+I+TP RL +
Sbjct: 180 LAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQK-GVEIIIATPGRLIDMLESNHT 238
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G DP ++ + P +SAT P VE+LAR
Sbjct: 239 NLRRVTYLVLDEADRMLDMG-----FDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQ 293
Query: 115 IMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+++ +VI+G ++ A+ +IKQ +V + KL+ L + + +LIF+ +K+
Sbjct: 294 FLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR--ILIFMDTKK 351
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +F++GK+ ++ ATDV ARG+D K V
Sbjct: 352 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKY 411
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 412 VINYDFPGSLEDYVHRI 428
>gi|319408783|emb|CBI82440.1| ATP-dependent RNA helicase [Bartonella schoenbuchensis R1]
Length = 454
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q + +AKG+ L+ + R + K D+LI+TP RL + K ID
Sbjct: 91 LAVQIEESIRMVAKGSHLSTCLILGGVSRFAQIKRMKTGVDVLIATPGRLMDLVSEKCID 150
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G ++ + + K +LFSAT+P + LA++++++
Sbjct: 151 LSQSRFLVLDEADRMLDMG-FIRDVQRIAKLLHEKRQT-ALFSATMPREIVTLAKNLLNE 208
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V++ + + T + I QKL + E K + L + + V+IF ++K A +
Sbjct: 209 PVKIEIVPQGTVATKITQKLYCVPTSEKKSV-LNKFLTDPALASVIIFTRTKHGADAVAR 267
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L G IH + S R+ A+ FR G +L+ATD+ ARG+D GV+ VINYD P
Sbjct: 268 SLTKAGYSVAAIHGNKSHAARQRALKAFREGSVGILVATDIAARGIDVPGVSHVINYDLP 327
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 328 DEAENYVHRI 337
>gi|222149464|ref|YP_002550421.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
gi|221736447|gb|ACM37410.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
Length = 484
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKACSNPS 94
DIL++TP RL I R I L V +LVLDEAD++ ++G + L+ I +V A
Sbjct: 141 GTDILVATPGRLLDLISRNAISLRAVTHLVLDEADQMLDLGFIHDLRKIAKMVPAKRQ-- 198
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA S +++ V V V A++ ++Q + F + K L+++
Sbjct: 199 --TLLFSATMPKAIADLAGSFLNNPVTVEVSPPGKAADKVEQYVHFVNGQNHKTELLKKT 256
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A+ + ++F+++K A++L L G IH + SQ QRE A+ FR G L
Sbjct: 257 LADHPDGRSIVFLRTKHGAEKLMKHLEITGFSVASIHGNKSQGQRERALKGFRDGSIRTL 316
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
IATDV ARG+D V+ V NYD P+ AY+HRI
Sbjct: 317 IATDVAARGIDIPAVSHVFNYDLPEVPDAYVHRI 350
>gi|417974638|ref|ZP_12615445.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
gi|346328982|gb|EGX97294.1| ATP-dependent RNA helicase [Lactobacillus ruminis ATCC 25644]
Length = 497
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGN--KFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +L K K Q+ ++ R L K IL+ TP RL I RK +D
Sbjct: 81 LAIQTQEELYRLGKDKRAKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHINRKTVD 140
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
LS V+ LVLDEAD++ ++G L+ I+ ++K P ++L FSAT+P + + MH
Sbjct: 141 LSHVKTLVLDEADEMLDMG-FLEDIEAIIKNV--PEERQTLLFSATMPKAIRSIGEKFMH 197
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ V + K ++ + Q V A E K + + ++F ++K R EL
Sbjct: 198 EPQVVKIKAKELTTDLVDQYFVKAREYE-KFDIMTRILDVQAPELTIVFGRTKRRVDELS 256
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L G A IH DL+Q +R N + F+ G+ +L+ATDV ARG+D GV V NYD
Sbjct: 257 KGLEARGYNAAGIHGDLTQQRRMNILKKFKEGRLDILVATDVAARGLDISGVTHVYNYDI 316
Query: 238 PDSGAAYIHRI 248
P +Y+HRI
Sbjct: 317 PQDPESYVHRI 327
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 130/254 (51%), Gaps = 11/254 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q E KK +K ++ + + + K C+I+++TP RL ++ K +
Sbjct: 313 LAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALT 372
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
+ R YLVLDEAD++F++G +P V++ P LFSAT+P VE+LAR I
Sbjct: 373 MMRASYLVLDEADRMFDLG-----FEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREI 427
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAK 174
+ D +RV VG A+E I Q + S+ KL L + ++ VL+F K
Sbjct: 428 LSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVD 487
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
E+ +L + + +H D Q R + F++G VLIATDV ARG+D K + V+N
Sbjct: 488 EIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVN 547
Query: 235 YDFPDSGAAYIHRI 248
YD ++HRI
Sbjct: 548 YDIAKDMDMHVHRI 561
>gi|339006826|ref|ZP_08639401.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338776035|gb|EGP35563.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 500
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
S I+I+TP RL +RR I L++V LVLDEAD++ +G L ++ +++A S P+
Sbjct: 124 SRQIVIATPGRLLDHMRRGTIQLAQVSQLVLDEADQMLHLG-FLPEVEEIIQATS-PTRQ 181
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+P ++ LA+ M V + + +I+Q+ V ++ K ALRQ+
Sbjct: 182 TLLFSATMPKQIQSLAKGFMRQPVTIKAKSEGITVANIEQR-VIETTDRAKQAALRQAID 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E +IF ++K RA L L G + +H DLSQ +RE + FR L+A
Sbjct: 241 ECRPFLAVIFCRTKRRASTLNEALQGFGYASDELHGDLSQAKREQVMKRFREASLQFLVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D +GV V NYD P +YIHRI
Sbjct: 301 TDVAARGLDVEGVTHVFNYDIPHDVESYIHRI 332
>gi|328706401|ref|XP_001950362.2| PREDICTED: putative ATP-dependent RNA helicase Pl10-like
[Acyrthosiphon pisum]
Length = 681
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 140/262 (53%), Gaps = 19/262 (7%)
Query: 1 LATQTTRECKKLAKGNKFQ---IKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LATQ E KK A ++ + + + + DL + C +L++TP RL + R KI
Sbjct: 289 LATQIYDEAKKFAYRSRVRPCVVYGGSHVMDQIRDLEQ-GCHLLVATPGRLVDMLERGKI 347
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARS 114
L YLVLDEAD++ ++G I +V+ S P +FSAT P ++ LAR
Sbjct: 348 GLDFCRYLVLDEADRMLDMG-FETQIRRIVEKDSMPPPGDRQTLMFSATFPKEIQMLARD 406
Query: 115 IMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL------RQSFAESLNPPVLIF 166
+ + + + +GR + SE+I QK+V+ + LL L R AESL +L+F
Sbjct: 407 FLDNYIFLAIGRVGSTSENITQKIVWVEDRNKRSYLLDLLNATPIRSKPAESL---ILVF 463
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
V++K+ A L L +G IH D +Q +RE+A+ FR+G T VL+AT V ARG+D
Sbjct: 464 VETKKGADSLEEFLYSNGYPVTSIHGDRTQREREDALKSFRSGNTPVLVATAVAARGLDI 523
Query: 227 KGVNCVINYDFPDSGAAYIHRI 248
V VINYD P Y+HRI
Sbjct: 524 PHVTHVINYDLPSDVEEYVHRI 545
>gi|89092720|ref|ZP_01165673.1| putative ATP-dependent RNA helicase [Neptuniibacter caesariensis]
gi|89083232|gb|EAR62451.1| putative ATP-dependent RNA helicase [Oceanospirillum sp. MED92]
Length = 427
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL++TP RL +R+K I L ++EYLVLDEAD++ ++G IDP+ K +
Sbjct: 124 KRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLG----FIDPIQKIMDYAA 179
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LF+AT + VE LA +++ ++ V +N+ ++ I+Q + K L
Sbjct: 180 DDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQ-FAYQVDYGQKADILS 238
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
E L+FV++K+R EL L +GI A IH + SQ +R +++F AG
Sbjct: 239 YLITEGKWGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLH 298
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATDV ARG+D + + V+NYD P+ AY+HRI
Sbjct: 299 VLVATDVAARGLDIESLPYVVNYDLPNQPEAYVHRI 334
>gi|367016443|ref|XP_003682720.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
gi|359750383|emb|CCE93509.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
Length = 512
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 125/217 (57%), Gaps = 7/217 (3%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
++++TP RL ++ +DLS V YLVLDEAD++ E G + I ++++ + S
Sbjct: 221 AQVVVATPGRLLDLMQEGSVDLSNVSYLVLDEADRMLEKG-FEEDIKNIIRSTNTSSRQT 279
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQ 153
+F+AT P V ELA + M D V+V +G ++ +A++ I Q +++ +E KLL L +
Sbjct: 280 LMFTATWPKEVRELASTFMSDPVKVSIGNRDELSANKRITQVVEVIDQFQKERKLLELLK 339
Query: 154 SF--AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + VLIF K+ A + L ++G IH DLSQ QR A+++F+ G +
Sbjct: 340 KYQSGPKKDEKVLIFALYKKEATRVERNLKYNGYNVAAIHGDLSQQQRSQALNEFKTGAS 399
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 400 NLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 436
>gi|109898646|ref|YP_661901.1| DEAD/DEAH box helicase [Pseudoalteromonas atlantica T6c]
gi|109700927|gb|ABG40847.1| DEAD/DEAH box helicase-like protein [Pseudoalteromonas atlantica
T6c]
Length = 426
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 127/217 (58%), Gaps = 5/217 (2%)
Query: 34 SKFSC--DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
SK S DI+ISTP RL + K ++L+ VE++VLDEAD++ ++G + + + S
Sbjct: 119 SKLSAGVDIVISTPGRLLEHMTLKNVELANVEFVVLDEADRMLDMGFIADVRQMLAQITS 178
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
+ LFSAT+ V ELA ++ + + + N+A++++ Q +++ SEE K+
Sbjct: 179 AHQTL--LFSATISPTVNELAHKLLKNHQEIRATQLNSAADTV-QHVMYPVSEEDKIRLF 235
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ AE VL+F +KE+A +L L I A V H+D SQ R A+ DF++ K
Sbjct: 236 KTLLAEQNWYQVLVFTSTKEQADKLMAALKTSKIDAAVCHADKSQGARRRAIADFKSAKL 295
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VLIAT+V ARG+D +G++ V+NY+ P Y+HRI
Sbjct: 296 QVLIATEVAARGLDIQGLDYVVNYNLPYLPEDYVHRI 332
>gi|300772766|ref|ZP_07082636.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
gi|300761069|gb|EFK57895.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
Length = 435
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 7/212 (3%)
Query: 39 DILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS 98
DILI+TP RL + IDL ++EY VLDEAD++ ++G I V K S R
Sbjct: 143 DILIATPGRLLDLYNQGFIDLKQLEYFVLDEADRMLDMG----FIHDVKKVISIIPKKRQ 198
Query: 99 --LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+P +++LA I+ D +V V ++T +E I+Q + F + + L +
Sbjct: 199 TLLFSATMPAEIQKLASHILEDPSKVEVTPESTTAEKIQQSVYFVSKSDKRHLLTHLLKS 258
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E++ L+F ++K A + +LA GI+A IH + SQ+ R+NA+++F+ K VL+A
Sbjct: 259 ENIEH-TLVFSRTKHGADRIAKDLAKQGIQAAAIHGNKSQSARQNALNNFKDRKLRVLVA 317
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D ++ VIN+D P+ +Y+HRI
Sbjct: 318 TDIAARGIDIDDLSYVINFDLPNIPESYVHRI 349
>gi|269838391|ref|YP_003320619.1| DEAD/DEAH box helicase [Sphaerobacter thermophilus DSM 20745]
gi|269787654|gb|ACZ39797.1| DEAD/DEAH box helicase domain protein [Sphaerobacter thermophilus
DSM 20745]
Length = 526
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 15/220 (6%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVK 88
+ ++++ TP R+ IRR+ +DLS V +V+DEAD++ ++G +L H+ P +
Sbjct: 118 RHPVEVVVGTPGRVMDHIRRETLDLSNVSTVVIDEADEMLDMGFIEDVEWILDHV-PAER 176
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
+ LFSAT+PD V LAR + D RV V + I+Q V + K+
Sbjct: 177 QTA-------LFSATIPDRVAALARRYLRDPARVAVEPERVTVPQIEQTYVEV-VQRAKV 228
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
AL + P +IF ++K EL +L G A +H DLSQ QR+ + FR+
Sbjct: 229 EALTRILDMETPPSAIIFCRTKRGVDELTQQLQSLGYAAEALHGDLSQVQRDRVMARFRS 288
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ +LIATDV ARG+D +G+ VINYD P +Y+HRI
Sbjct: 289 GQAELLIATDVAARGLDVEGITHVINYDIPGDPESYVHRI 328
>gi|323340095|ref|ZP_08080360.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
gi|323092472|gb|EFZ35079.1| ATP-dependent RNA helicase DeaD [Lactobacillus ruminis ATCC 25644]
Length = 506
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGN--KFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +L K K Q+ ++ R L K IL+ TP RL I RK +D
Sbjct: 90 LAIQTQEELYRLGKDKRAKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHINRKTVD 149
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS V+ LVLDEAD++ ++G L+ I+ ++K LFSAT+P + + MH+
Sbjct: 150 LSHVKTLVLDEADEMLDMG-FLEDIEAIIKNVPEERQT-LLFSATMPKAIRSIGEKFMHE 207
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V + K ++ + Q V A E K + + ++F ++K R EL
Sbjct: 208 PQVVKIKAKELTTDLVDQYFVKAREYE-KFDIMTRILDVQAPELTIVFGRTKRRVDELSK 266
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L G A IH DL+Q +R N + F+ G+ +L+ATDV ARG+D GV V NYD P
Sbjct: 267 GLEARGYNAAGIHGDLTQQRRMNILKKFKEGRLDILVATDVAARGLDISGVTHVYNYDIP 326
Query: 239 DSGAAYIHRI 248
+Y+HRI
Sbjct: 327 QDPESYVHRI 336
>gi|388508122|gb|AFK42127.1| unknown [Medicago truncatula]
Length = 499
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 15/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K ++ + + + + DL K +I+I+TP RL +
Sbjct: 180 LAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQK-GVEIIIATPGRLIDMLESNHT 238
Query: 58 DLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
+L RV YLVLDEAD++ ++G ++ I P ++ P +SAT P VE+LAR
Sbjct: 239 NLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIR----PDRQTLYWSATWPKEVEQLARQF 294
Query: 116 MHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+++ +VI+G ++ A+ +IKQ +V + KL+ L + + +LIF+ +K+
Sbjct: 295 LYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR--ILIFMDTKKG 352
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
++ +L DG A IH D SQ +R+ + +F++GK+ ++ ATDV ARG+D K V V
Sbjct: 353 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYV 412
Query: 233 INYDFPDSGAAYIHRI 248
INYDFP S Y+HRI
Sbjct: 413 INYDFPGSLEDYVHRI 428
>gi|335998488|ref|ZP_08564399.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
gi|335348343|gb|EGM49849.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
Length = 506
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 1 LATQTTRECKKLAKGN--KFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA QT E +L K K Q+ ++ R L K IL+ TP RL I RK +D
Sbjct: 90 LAIQTQEELYRLGKDKRAKVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHINRKTVD 149
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMH 117
LS V+ LVLDEAD++ ++G L+ I+ ++K P ++L FSAT+P + + MH
Sbjct: 150 LSHVKTLVLDEADEMLDMG-FLEDIEAIIKNV--PEERQTLLFSATMPKAIRSIGEKFMH 206
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY 177
+ V + K ++ + Q V A E K + + ++F ++K R EL
Sbjct: 207 EPQVVNIKAKELTTDLVDQYFVKAREYE-KFDIMTRILDVQAPELTIVFGRTKRRVDELS 265
Query: 178 GELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
L G A IH DL+Q +R N + F+ G+ +L+ATDV ARG+D GV V NYD
Sbjct: 266 KGLEARGYNAAGIHGDLTQQRRMNILKKFKEGRLDILVATDVAARGLDISGVTHVYNYDI 325
Query: 238 PDSGAAYIHRI 248
P +Y+HRI
Sbjct: 326 PQDPESYVHRI 336
>gi|375311036|ref|ZP_09776294.1| hypothetical protein WG8_4828, partial [Paenibacillus sp. Aloe-11]
gi|375076910|gb|EHS55160.1| hypothetical protein WG8_4828, partial [Paenibacillus sp. Aloe-11]
Length = 345
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 138/253 (54%), Gaps = 9/253 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMK----KELVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA Q T E K+LA + + L+ +++ R K ++I TP RL +RR
Sbjct: 82 LALQITEEAKRLA-AIEPNLSLLAVYGGQDVERQLRKLKGGAQLIIGTPGRLLDHLRRGT 140
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSI 115
+DL V+ LVLDEAD++ +G L ++ +++ P ++ LFSAT+P + +LAR
Sbjct: 141 LDLGGVKMLVLDEADQMLHMG-FLNDVETILQEV--PYRRQTMLFSATMPAGIRKLARVY 197
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKE 175
M++ + V V ++ S +++V ++ GK AL +IF ++K RA +
Sbjct: 198 MNEPIDVKVKSASSVPVSQIRQVVVQTTDRGKQRALVDMLNTDRPYLAVIFCRTKRRAAK 257
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L EL G +G +H DLSQ +RE + FR K +L+ATDV ARG+D +GV V NY
Sbjct: 258 LNEELQEMGFASGELHGDLSQNKREQVMKAFREAKLQLLVATDVAARGLDVEGVTHVFNY 317
Query: 236 DFPDSGAAYIHRI 248
D P +YIHRI
Sbjct: 318 DMPQDAESYIHRI 330
>gi|395789518|ref|ZP_10469037.1| hypothetical protein ME9_00754 [Bartonella taylorii 8TBB]
gi|395429855|gb|EJF95911.1| hypothetical protein ME9_00754 [Bartonella taylorii 8TBB]
Length = 436
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 21/258 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC--DILISTPLRLRLAIRRKKID 58
LA Q + A+G L+ + R + + D+LI+TP RLR +R K +D
Sbjct: 69 LAVQIDETIRVAARGTHLSTCLIFGGVSRLKQIKRIGAGVDVLIATPGRLRDLVREKCVD 128
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G + + + K +LFSAT+P + LA+ +++D
Sbjct: 129 LSQSRFLVLDEADRMLDMG-FINDVQQIAKLLHQERQT-ALFSATMPKEITVLAKCLLND 186
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEE-----GKLLALRQSFAESLNPP---VLIFVQSK 170
V++ V + T I QKL + E GKLL NP V++F ++K
Sbjct: 187 PVKIEVTPQGTTVAEITQKLYCVPTSEKKNVLGKLLT---------NPALTSVIVFTRTK 237
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
A + L G IH + SQ+ R++A+ FR +L+ATD+ ARG+D G++
Sbjct: 238 HGADAVTRTLTKIGYSVATIHGNKSQSARQSALKAFRERAVRILVATDIAARGIDVLGIS 297
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD PD +Y+HRI
Sbjct: 298 HVINYDLPDEAESYVHRI 315
>gi|283784562|ref|YP_003364427.1| ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
gi|282948016|emb|CBG87580.1| putative ATP-dependent RNA helicase [Citrobacter rodentium ICC168]
Length = 451
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKRLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|261341381|ref|ZP_05969239.1| ATP-dependent RNA helicase RhlE [Enterobacter cancerogenus ATCC
35316]
gi|288316692|gb|EFC55630.1| ATP-dependent RNA helicase RhlE [Enterobacter cancerogenus ATCC
35316]
Length = 457
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|373450995|ref|ZP_09542934.1| DEAD-box ATP-dependent RNA helicase cshA [Wolbachia pipientis
wAlbB]
gi|371931802|emb|CCE77952.1| DEAD-box ATP-dependent RNA helicase cshA [Wolbachia pipientis
wAlbB]
Length = 408
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 140/254 (55%), Gaps = 13/254 (5%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q T E +KL N ++ L+ + + R + + I+I TP R+ I RK +
Sbjct: 82 LAHQVTNEIRKLLSQNSILRVALLIGGEPIFRQLNQLQKKPQIIIGTPGRIIDHIERKAL 141
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIM 116
V LVLDE D++F++G ++ I+ ++K P I ++L FSATLP + +L +
Sbjct: 142 ITRNVSTLVLDETDRMFDMGFGIQ-IEGIMKYL--PKIRQTLMFSATLPSDIVKLTEKYL 198
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQSKERAK 174
+ RV V + T S IKQ++V+A E GKL+ S ++IFV++K A
Sbjct: 199 NQPERVSVDCQATTSAKIKQEIVYASESEKYGKLITQLCQRKGS----IIIFVKTKRGAD 254
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L +L D A IH DL Q +RE ++ FR G+ +++ATDV +RG+D + VIN
Sbjct: 255 QLADKLHKDDYSALAIHGDLRQHKRERVINSFRRGRNQIMVATDVASRGLDIPHIQHVIN 314
Query: 235 YDFPDSGAAYIHRI 248
YD P S A Y+HRI
Sbjct: 315 YDVPQSQADYVHRI 328
>gi|363892696|ref|ZP_09319856.1| hypothetical protein HMPREF9630_01934 [Eubacteriaceae bacterium
CM2]
gi|361963130|gb|EHL16216.1| hypothetical protein HMPREF9630_01934 [Eubacteriaceae bacterium
CM2]
Length = 383
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 126/213 (59%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
L SAT+P+ + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPNPIIDLAKKLIKNPVKIDITQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 157 ESLNPPV-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E NP + +IF SK+ A++LY + DG ++H D SQ +RE ++ FR K L+
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQKKREFILEQFRKMKFRFLV 295
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+TD+ ARG D GV VINY+ P YIHRI
Sbjct: 296 STDLSARGFDIDGVTHVINYEIPADHKYYIHRI 328
>gi|392589702|gb|EIW79032.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 654
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 312 GCDLLTATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGTQ 370
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + K L
Sbjct: 371 ERQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYV-EDNDKRSVLLD 429
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A L+ L+FV++K A L L + I A IH D +Q +RE A+ FR G+T V
Sbjct: 430 ILASDLSGLTLVFVETKRMADMLSDFLMSNRIAATSIHGDRTQRERELALQTFRTGRTPV 489
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 490 LVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRI 524
>gi|319902155|ref|YP_004161883.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417186|gb|ADV44297.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 415
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + +DLSRV Y +LDEAD++ ++G I +VK P
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVTYFILDEADRMLDMG-FYDDIMQIVKFL--PKE 180
Query: 96 VRS-LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
++ +FSAT+P +++LA +I+++ V + A + ++ + E KL +R
Sbjct: 181 RQTIMFSATMPTKIQQLANNILNNPAEVKLAVSKPADKIVQA--AYVCYENQKLGIIRNL 238
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
FAE V+IF SK + KE+ L + G +HSDL Q QRE+ + +F+AG+ +L
Sbjct: 239 FAEQTPERVIIFASSKLKVKEVTKALKQMKLNVGEMHSDLEQAQREDVMYEFKAGRINIL 298
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 299 VATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|149926712|ref|ZP_01914972.1| Helicase [Limnobacter sp. MED105]
gi|149824641|gb|EDM83857.1| Helicase [Limnobacter sp. MED105]
Length = 539
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 128/218 (58%), Gaps = 14/218 (6%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNP 93
+++I+TP RL +++K I+L +V+ LVLDEAD++ ++G +L + I+ + K N
Sbjct: 146 GVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQN- 204
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA--- 150
LFSAT +++LA+S M + V R+N SE+IKQ + SEE K +A
Sbjct: 205 ----LLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDKRMAVCH 260
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L QS A S V++F +K L L +G+ + IH D +Q +R +++ F+AG+
Sbjct: 261 LIQSKALSQ---VIVFSNTKLGTARLARHLEKEGVSSTAIHGDKTQIERTKSLEAFKAGE 317
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATDV ARG+D + CVINYD P + Y+HRI
Sbjct: 318 VTVLVATDVAARGLDIADLPCVINYDLPTTPEDYVHRI 355
>gi|337744819|ref|YP_004638981.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336296008|gb|AEI39111.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
Length = 425
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 138/254 (54%), Gaps = 13/254 (5%)
Query: 1 LATQTTRECKKLA--KGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q T E + A KG + +++ R + + I+++TP RL +RR+ +
Sbjct: 84 LAIQITEEVARWAPLKGIRVLSAYGGQDVERQIRKLEGAIHIIVATPGRLLDHLRRETVQ 143
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS--LFSATLPDFVEELARSIM 116
L ++ LVLDEAD++ +G L + VV+ S R LFSAT+P+ V +LA+ M
Sbjct: 144 LFKLSTLVLDEADQMLHMGFLPE----VVEIISATPTRRQTLLFSATMPERVRQLAKEYM 199
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVL--IFVQSKERAK 174
V + V K + I+Q +V ++ GKL AL ++ E +PP L IF ++K RA
Sbjct: 200 KPPVEIEVKAKRVTLDEIEQ-IVVQTTDRGKLDALCKAMEE--DPPFLGMIFCRTKLRAT 256
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
+L EL G +H DL+Q +RE + FR K L+ATD+ ARG+D +G+ V N
Sbjct: 257 KLRDELDERGYAVDELHGDLTQAKREQVMKRFRDAKIQFLVATDIAARGLDVEGITHVYN 316
Query: 235 YDFPDSGAAYIHRI 248
YD P +YIHRI
Sbjct: 317 YDIPHDAESYIHRI 330
>gi|355757238|gb|EHH60763.1| Putative ATP-dependent RNA helicase DDX53 [Macaca fascicularis]
Length = 596
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 16/256 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC K + + I + + + + D+SK DI+I+TP RL ++
Sbjct: 272 LALQVEAECSKYSYKDLKSICICGGRNRIGQIEDISK-DVDIIIATPGRLNDLQMNNSVN 330
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC---SNPSIVRSLFSATLPDFVEELARSI 115
L + YLV+DEADK+ ++ +P + +P + SAT PD V LARS
Sbjct: 331 LRSITYLVMDEADKMLDM-----EFEPQIMKILLDVHPDRQTVMTSATWPDTVRRLARSY 385
Query: 116 MHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKER 172
+ D + V VG N A+ ++KQ ++ EE + AL Q F E+++P V++FV K
Sbjct: 386 LKDPMIVYVGNLNLAAVNTVKQNIIVTTEEEKR--ALTQEFIENMSPNDKVIMFVSQKRI 443
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A +L + GI +H + Q+ +E A++DF +G +LI TD++ARG+D V V
Sbjct: 444 ADDLSSDFNIQGISVESLHGNSEQSDKERALEDFESGNIKILITTDLVARGLDVNDVTHV 503
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HR+
Sbjct: 504 YNYDFPWNIEEYVHRV 519
>gi|397497647|ref|XP_003819617.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Pan paniscus]
Length = 631
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 14/223 (6%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC- 90
D+SK DI+I+TP RL ++L + YLV+DEADK+ ++ +P +
Sbjct: 341 DISK-GVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDM-----EFEPQIMKIL 394
Query: 91 --SNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKLVFAGSEEGK 147
P + SAT PD V +LA S + D + V VG N A ++KQ ++ +E +
Sbjct: 395 LDVRPDRQTVMTSATWPDTVRQLALSYLKDPMMVYVGNLNLVAVNTLKQNIIVTTEKEKR 454
Query: 148 LLALRQSFAESLNP--PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
AL Q F E+++P V++FV K A +L + GI A +H + Q+ RE AV+D
Sbjct: 455 --ALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDRERAVED 512
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F++G +LI TD+++RG+D V V NYDFP + Y+HR+
Sbjct: 513 FKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRV 555
>gi|390953013|ref|YP_006416771.1| DNA/RNA helicase [Aequorivita sublithincola DSM 14238]
gi|390418999|gb|AFL79756.1| DNA/RNA helicase, superfamily II [Aequorivita sublithincola DSM
14238]
Length = 616
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 11/217 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K ++++TP R++ I R ID+S++EY VLDEAD++ +G + + + S+
Sbjct: 120 KKGSQVIVATPGRMKDMIGRGLIDISKIEYCVLDEADEMLNMG----FYEDITEILSHSP 175
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
+S LFSAT+P V +A+ MH V + VG KN S+ + + + + + AL+
Sbjct: 176 KEKSTWLFSATMPKEVSTIAKKFMHTPVEITVGTKNVGSDQVSHEYYLVNARD-RYSALK 234
Query: 153 QSFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+ A++ NP + +IF ++K +++ +L DG A +H DLSQ+QR+ + FRA +
Sbjct: 235 R-LADA-NPEIFSVIFCRTKRDTQKVAEQLIEDGYNAAALHGDLSQSQRDTVMKSFRARQ 292
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+L+ATDV ARG+D + VINY PD Y HR
Sbjct: 293 IQMLVATDVAARGIDVDDITHVINYQLPDETEIYTHR 329
>gi|353239459|emb|CCA71370.1| probable DED1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 650
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 321 GCDLLSATPGRLVDLIERGRISLANIKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVR 379
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + + + + VGR + SE+I QK+ + ++ + + L
Sbjct: 380 ERQTLMFSATFPRDIQILARDFLKEYIFLSVGRVGSTSENITQKIEYVEDQDKRSVLLDI 439
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
AE LIFV++K A L L A IH D +Q +RE+A+ FR+G+T +
Sbjct: 440 LNAEEQTGLTLIFVETKRMADMLSDFLMAQHYPATSIHGDRTQREREHALATFRSGRTPI 499
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 500 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 534
>gi|302789414|ref|XP_002976475.1| hypothetical protein SELMODRAFT_105510 [Selaginella moellendorffii]
gi|300155513|gb|EFJ22144.1| hypothetical protein SELMODRAFT_105510 [Selaginella moellendorffii]
Length = 613
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 12/259 (4%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
L++Q E KK A ++ ++ + L + DIL++TP RL ++R +I
Sbjct: 245 LSSQIHDEAKKFAYQTGVKVVVIYGGTSVQSQLKELERGVDILVATPGRLDDLMQRGRIS 304
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVEELARSI 115
LS V YL LDEAD++ ++G I +V+ P + LFSAT P ++ LA
Sbjct: 305 LSLVRYLALDEADRMLDMG-FEPQIRKIVENTDMPPPGQRQTMLFSATFPREIQRLAADF 363
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLN------PPVLIFVQS 169
+++ + + VGR ++++ I Q++ + + + + + A+ N P +L+FV++
Sbjct: 364 LYNYIFLAVGRVGSSTDLIVQRVEYVHDVDKRSMLMDMIHAQKPNGLNGQLPLILVFVET 423
Query: 170 KERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
K A L L GI A IH D +Q +RE+A+ FR G T +L+ATDV ARG+D V
Sbjct: 424 KRGADSLEDWLIQMGISATTIHGDRTQVEREHALRSFRTGVTPILVATDVAARGLDIPHV 483
Query: 230 NCVINYDFPDSGAAYIHRI 248
VINYD P Y+HRI
Sbjct: 484 AHVINYDLPSDIDDYVHRI 502
>gi|257440057|ref|ZP_05615812.1| putative ATP-dependent RNA helicase RhlE [Faecalibacterium
prausnitzii A2-165]
gi|257197409|gb|EEU95693.1| DEAD/DEAH box helicase [Faecalibacterium prausnitzii A2-165]
Length = 641
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 126/220 (57%), Gaps = 13/220 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACS 91
K DILI+ P RL + + +DLS +E VLDEAD++ ++G ++ K I + +
Sbjct: 121 KKGVDILIACPGRLNDLVGQGLLDLSNIEIFVLDEADRMLDMGFVHDVKKVIAKLPRQRQ 180
Query: 92 NPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
N +FSAT+P +E+LA I+HD V V ++ + I+Q L F E+G L
Sbjct: 181 N-----LMFSATMPKEIEQLAAGILHDPAFVKVDPVSSTVDRIQQSLYFV--EKGNKKFL 233
Query: 152 RQSFAESLNPPV---LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
++L P V L+F ++K A ++ +L GI A IH + SQT R A++DF+A
Sbjct: 234 LPWLIKNLKPEVVNALVFSRTKHGADKIAKDLNKQGIPAAAIHGNKSQTARVTALEDFKA 293
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT VL+ATD+ ARG+D ++ V NYD P+ Y+HRI
Sbjct: 294 GKTRVLVATDIAARGIDISELSHVFNYDLPEVPETYVHRI 333
>gi|421873722|ref|ZP_16305333.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372457268|emb|CCF14882.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 497
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
S I+I+TP RL +RR I L++V LVLDEAD++ +G L ++ +++A S P+
Sbjct: 121 SRQIVIATPGRLLDHMRRGTIQLAQVSQLVLDEADQMLHLG-FLPEVEEIIQATS-PTRQ 178
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT+P ++ LA+ M V + + +I+Q+++ ++ K ALRQ+
Sbjct: 179 TLLFSATMPKQIQSLAKGFMRQPVTIKAKSEGITVANIEQRVIET-TDRAKQAALRQAID 237
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
E +IF ++K RA L L G + +H DLSQ +RE + FR L+A
Sbjct: 238 ECRPFLAVIFCRTKRRAATLNEALQGFGYASDELHGDLSQAKREQVMKRFREASLQFLVA 297
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D +GV V NYD P +YIHRI
Sbjct: 298 TDVAARGLDVEGVTHVFNYDIPHDVESYIHRI 329
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 131/223 (58%), Gaps = 13/223 (5%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS 91
+ +KF +I+I+TP RL I +L R+ YLVLDEAD++ ++G +P +K
Sbjct: 185 EATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMG-----FEPQIKKIV 239
Query: 92 N---PSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQKL-VFAGSEE- 145
+ P +SAT P VE+LAR+ + D +VI+G + A+ +I Q + + + S++
Sbjct: 240 SQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKY 299
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+ L + + +LIF+ +K+ ++ +L DG A IH D SQ +R+ + +
Sbjct: 300 NKLVNLLEDIMDGSR--ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 357
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
F++GK+ ++ ATDV ARG+D K V VINYDFP S Y+HRI
Sbjct: 358 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 400
>gi|357403915|ref|YP_004915839.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
gi|351716580|emb|CCE22240.1| ATP-dependent RNA helicase [Methylomicrobium alcaliphilum 20Z]
Length = 425
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDI+++TP RL R+ +DL RVE LVLDEAD++ ++G + +D ++ P +
Sbjct: 123 GCDIVVATPGRLLDHARQGNVDLGRVEILVLDEADRMLDMG-FKREVDAILALL--PRLR 179
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT + ++ LA ++HD + + R+ +++++Q+ ++ E K L
Sbjct: 180 QNLLFSATFSNEIKTLAGRLLHDPIAIEAPRQTIDADTVEQR-IYPIKREYKRELLSYLI 238
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+FV+++ A L +L DGIR GV+H D SQ R A+ F++GK VL+
Sbjct: 239 GSGNWRQVLVFVRTRHGADRLAEQLIKDGIRTGVLHGDKSQGARMRALAGFKSGKIAVLV 298
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D + V+N+D P Y+HRI
Sbjct: 299 ATDIAARGLDIDQLPHVVNFDLPSVAEDYVHRI 331
>gi|213402561|ref|XP_002172053.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces japonicus
yFS275]
gi|212000100|gb|EEB05760.1| ATP-dependent RNA helicase Sum3 [Schizosaccharomyces japonicus
yFS275]
Length = 626
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 8/217 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ +++LVLDEAD++ ++G I +V+ P +
Sbjct: 298 GCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMG-FEPQIRHIVEGADMPGVE 356
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D V + VGR + SE+I QK+VF +E + L
Sbjct: 357 ERQTLMFSATFPRDIQVLARDFLKDYVFLSVGRVGSTSENITQKVVFVEDQEKRSYLL-- 414
Query: 154 SFAESLNPP--VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+L P LIFV++K A L L A IH D +Q +RE A++ FR+G++
Sbjct: 415 DILHTLPPEGLTLIFVETKRMADALTDFLLNSSFPATSIHGDRTQRERERALELFRSGRS 474
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+++AT V +RG+D V VINYD P Y+HRI
Sbjct: 475 SIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRI 511
>gi|395784104|ref|ZP_10463943.1| hypothetical protein ME3_00599 [Bartonella melophagi K-2C]
gi|395423859|gb|EJF90047.1| hypothetical protein ME3_00599 [Bartonella melophagi K-2C]
Length = 454
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--KFSCDILISTPLRLRLAIRRKKID 58
LA Q + +AKG+ L+ + RS + K D+LI+TP RL + K ID
Sbjct: 91 LAVQIEESIRMVAKGSHLSTCLILGGVSRSAQIKRMKTGVDVLIATPGRLMDLVCEKCID 150
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
LS+ +LVLDEAD++ ++G ++ + + K +LFSAT+P + LA+S++++
Sbjct: 151 LSQSRFLVLDEADRMLDMG-FIRDVQRIAKLLHEKRQT-ALFSATMPQEIVMLAKSLLNE 208
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
V++ + + T + I QKL + E K + L + + V+IF ++K A +
Sbjct: 209 PVKIEIVPQGTVATEITQKLYCVPTSEKKSV-LNKLLTDPALASVIIFTRTKHGADAVAR 267
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
L IH + S R+ A+ FR G +L+ATD+ ARG+D GV+ VINYD P
Sbjct: 268 SLTKAEYSVAAIHGNKSHAARQRALKAFREGSVRILVATDIAARGIDVPGVSHVINYDLP 327
Query: 239 DSGAAYIHRI 248
D Y+HRI
Sbjct: 328 DEAENYVHRI 337
>gi|89093138|ref|ZP_01166088.1| ATP-dependent RNA helicase [Neptuniibacter caesariensis]
gi|89082434|gb|EAR61656.1| ATP-dependent RNA helicase [Neptuniibacter caesariensis]
Length = 417
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 127/216 (58%), Gaps = 6/216 (2%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
LSK CDI+++TP RL +R+ +DL ++ LVLDEAD++ ++G +D ++
Sbjct: 122 LSK-GCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLG-FADELDDILD--QT 177
Query: 93 PSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
P V++L FSAT PD V+EL ++ + V + V ++ T + + Q+ + +L L
Sbjct: 178 PGNVQTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVDRNNRTML-L 236
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + +LIFV SK A + +L GI++ +H DL+Q +R A++DF G+
Sbjct: 237 KHLIKQEKWQQLLIFVGSKRTANNIELKLYRSGIQSSTLHGDLTQKERLGALEDFSKGRC 296
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+LIATD+ ARG+D + CV+NYD P + + Y+HR
Sbjct: 297 KILIATDLAARGIDIPSLPCVLNYDLPRATSDYVHR 332
>gi|354465160|ref|XP_003495048.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like
[Cricetulus griseus]
Length = 524
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 2/214 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C +L++TP RL + R KI L +YLVLDEAD++ ++G + V + P V
Sbjct: 177 GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV 236
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 237 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLL 296
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A + +L+FV++K+ A L L +G IH D SQ RE A+ FR+GK+ +L
Sbjct: 297 NATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPIL 356
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 357 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 390
>gi|302845088|ref|XP_002954083.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
gi|300260582|gb|EFJ44800.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
Length = 612
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 10/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CDIL++TP RL I R ++ LS + +L LDEAD++ ++G I +V+ P +
Sbjct: 284 GCDILVATPGRLSDFIERGRVGLSSILFLCLDEADRMLDMG-FEPQIRRIVEQEDMPPVG 342
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+ +FSAT P ++ LA + + V + VGR ++++ I Q + + S+E + LL L
Sbjct: 343 QRQTLMFSATFPKEIQRLAADFLSNYVFLTVGRVGSSTDLIVQHIEYVSSDEKQNTLLDL 402
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
S E L L+FV++K A EL L + + A IH D SQ QRE A+ F++GKT
Sbjct: 403 -ISTVEGL---TLVFVETKRGADELERILTRNQLPATSIHGDRSQEQREMALRSFKSGKT 458
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
V++ATDV ARG+D V VINYD P Y+HRI
Sbjct: 459 PVMVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRI 495
>gi|363889113|ref|ZP_09316479.1| hypothetical protein HMPREF9628_01115 [Eubacteriaceae bacterium
CM5]
gi|361967076|gb|EHL19942.1| hypothetical protein HMPREF9628_01115 [Eubacteriaceae bacterium
CM5]
Length = 383
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
L SAT+P + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPKPIIDLAKKLIKNPVKIDIAQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 157 ESLNPPV-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E NP + +IF SK+ A++LY + DG ++H D SQ +RE ++ FR K L+
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQKKREFILEQFRKMKFRFLV 295
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+TD+ ARG D GV VINY+ P YIHRI
Sbjct: 296 STDLSARGFDIDGVTHVINYEIPADHKYYIHRI 328
>gi|357059925|ref|ZP_09120700.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
gi|355377113|gb|EHG24347.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
Length = 421
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 12/218 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+I+TP RL + +DLS +L+LDEAD++ ++G D ++K
Sbjct: 129 KQGADIVIATPGRLLTHLDLGNLDLSHTTHLILDEADRMLDMG----FSDDILKIVKQLP 184
Query: 95 IVRS--LFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
R LFSAT+PD +++ ARSIMH+ +R+ V + +E I+Q ++ E K
Sbjct: 185 EKRQTILFSATMPDTIDKFARSIMHNPEEIRLAVSK---PAEKIQQS-IYVCRETDKNTI 240
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
+R F + V+IF SK++ KEL+ L +HSDL Q QR+ + F++G
Sbjct: 241 IRHLFKQCKPERVIIFCSSKQKVKELHILLKRAHFNCEAMHSDLLQQQRDEVMLKFKSGH 300
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
T +L+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 301 TDILVATDIVARGIDINDIQMVINYDAPRDAEDYVHRI 338
>gi|357626906|gb|EHJ76805.1| DEAD box ATP-dependent RNA helicase-like protein [Danaus plexippus]
Length = 773
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 132/223 (59%), Gaps = 6/223 (2%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK 88
++ DL K +I+I+TP RL + R +L R YLVLDEAD++ ++G I +++
Sbjct: 302 QARDLEK-GVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMG-FEPQIRKIIE 359
Query: 89 ACSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKN-TASESIKQ--KLVFAGSEE 145
P ++SAT P ++ LA + D ++V +G N +A+ +IKQ ++ +E
Sbjct: 360 QI-RPDRQVLMWSATWPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVCEEHEKE 418
Query: 146 GKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+ L + + + V++FV++K++ ++ + +G +A IH D SQ +R+ + +
Sbjct: 419 SKLINLLKEISSEKDNKVIVFVETKKKVDDIAHAVRRNGHKALAIHGDKSQPERDAVLTE 478
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G T +LIATDV ARG+D + V V+NYD+P++ YIHRI
Sbjct: 479 FRNGSTTILIATDVAARGLDVEDVKFVVNYDYPNTSEDYIHRI 521
>gi|238879720|gb|EEQ43358.1| hypothetical protein CAWG_01593 [Candida albicans WO-1]
Length = 562
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFS--CDILISTPLRLRLAIRRKKID 58
L Q EC K K ++ + + + + + +I I+TP RL + K +
Sbjct: 213 LTVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTN 272
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++L R
Sbjct: 273 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDY 327
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPP---VLIFVQSKER 172
++D ++V +G A+ +LV E K L + +LN +L+F +K
Sbjct: 328 LNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRT 387
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +D+FR GKT +++ATDV ARG+D KG+ V
Sbjct: 388 CDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHV 447
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 448 INYDMPGNIEDYVHRI 463
>gi|401762889|ref|YP_006577896.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400174423|gb|AFP69272.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 460
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 179 ARRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|365122531|ref|ZP_09339432.1| hypothetical protein HMPREF1033_02778 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642279|gb|EHL81637.1| hypothetical protein HMPREF1033_02778 [Tannerella sp.
6_1_58FAA_CT1]
Length = 428
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSI 95
D++I+TP RL + + L VEYL+LDEAD++ ++G D +++ C++
Sbjct: 124 MGADVVIATPGRLISHLVNSGVKLPFVEYLILDEADRMLDMG----FYDDIMQICNHLPK 179
Query: 96 VRS--LFSATLPDFVEELARSIMHDA--VRVIVGRKNTASESIKQKLVFAGSEEGKLLAL 151
R LFSAT+P + +LA++I+H+ + + V + N E+I+Q + E K+ +
Sbjct: 180 KRQTILFSATMPPKIRQLAKNILHNPAEINIAVSKPN---EAIRQS-AYVCYENQKMAII 235
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
F++ + +IF SK++ KEL +L +HSDL Q+QRE + DF+ GK
Sbjct: 236 EAVFSKKIEGKTIIFSSSKQKVKELTTKLRRMKYNVRAMHSDLEQSQREEVMLDFKNGKV 295
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD++ARG+D + VIN+D P YIHRI
Sbjct: 296 DVLVATDIVARGIDITDIGLVINFDVPHDPEDYIHRI 332
>gi|254457659|ref|ZP_05071087.1| putative helicase [Sulfurimonas gotlandica GD1]
gi|373867807|ref|ZP_09604205.1| putative RNA-helicase, DEAD/DEAH box family [Sulfurimonas
gotlandica GD1]
gi|207086451|gb|EDZ63735.1| putative helicase [Sulfurimonas gotlandica GD1]
gi|372469908|gb|EHP30112.1| putative RNA-helicase, DEAD/DEAH box family [Sulfurimonas
gotlandica GD1]
Length = 423
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG---NLLKHIDPVVKACSNP 93
DI+I+TP RL I +K IDLS+V++L+LDEAD++ ++G ++ K ++ + K N
Sbjct: 124 GIDIVIATPGRLLDHISQKTIDLSKVDFLILDEADRMLDMGFINDIRKILEILPKQRQN- 182
Query: 94 SIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
LFSAT D +++L+ +++ + V R+NTASE++KQ V+ +E K L
Sbjct: 183 ----LLFSATYSDEIKKLSDRLLNSPTLIEVARRNTASETVKQA-VYPVDKERKRELLTH 237
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ VL+F ++K A L +L DGI + IH + SQ R A+ DF+ + V
Sbjct: 238 LINDGKWKQVLVFTRTKHGANRLSDQLEKDGITSAAIHGNKSQNARTKALADFKKSEVRV 297
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 LVATDIAARGIDIDQLPHVVNYELPNVSEDYVHRI 332
>gi|114794734|pdb|2I4I|A Chain A, Crystal Structure Of Human Dead-Box Rna Helicase Ddx3x
Length = 417
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 2/214 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C +L++TP RL + R KI L +YLVLDEAD++ ++G + V + P V
Sbjct: 151 GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV 210
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 211 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL 270
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A + L+FV++K+ A L L +G IH D SQ RE A+ FR+GK+ +L
Sbjct: 271 NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPIL 330
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 331 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 364
>gi|399023038|ref|ZP_10725105.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398083597|gb|EJL74302.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 420
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + I L +E VLDEAD++ ++G + + ++K P
Sbjct: 123 GVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMG-FVHDVKRIIKLLP-PRRQ 180
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT+P +++LA SI+++ V+V V ++ +E+I+Q + F E+ KL L
Sbjct: 181 TLFFSATMPTEIQKLADSILNNPVKVEVTPVSSTAETIQQSVYFVQKED-KLGLLTHILK 239
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
++ VL+F ++K A ++ + GI A IH + SQ R+NA+++F++GKT VL+A
Sbjct: 240 NHISESVLVFSRTKHGADKIARTIHKSGISAEAIHGNKSQNARQNALNNFKSGKTRVLVA 299
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TD+ ARG+D + VINY+ D Y+HRI
Sbjct: 300 TDIAARGIDIDELKFVINYELSDVSETYVHRI 331
>gi|188534378|ref|YP_001908175.1| ATP-dependent RNA helicase RhlE [Erwinia tasmaniensis Et1/99]
gi|188029420|emb|CAO97297.1| Putative ATP-dependent RNA helicase [Erwinia tasmaniensis Et1/99]
Length = 468
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 13/219 (5%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + +DLS+VE LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNALDLSQVEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK----LL 149
++L FSAT D ++ LA ++H+ +V V R+NTASE + Q + + + LL
Sbjct: 180 KRQNLLFSATFSDEIKTLAEKLLHNPEQVEVARRNTASEQVTQHVHLVDKKRKRELLSLL 239
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
R ++ + VL+F ++K A L +L DGI A IH + SQ R A+ DF+ G
Sbjct: 240 IGRGNWQQ-----VLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKEG 294
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
K VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 295 KIRVLVATDIAARGIDIEELPHVVNYELPNVSEDYVHRI 333
>gi|423139268|ref|ZP_17126906.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379051822|gb|EHY69713.1| ATP-dependent RNA helicase RhlE [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 453
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L ++E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + + V R+NTASE + Q + F + + L L
Sbjct: 179 AKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|291225668|ref|XP_002732809.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 795
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 13/255 (5%)
Query: 1 LATQTTRECKKLAKGNKFQI--KLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
L+ Q +ECKK K + T + C+IL++TP RL ++RK +
Sbjct: 342 LSQQIHQECKKFGKAYNIHTVCAYGGGNMWEQTKACQAGCEILVATPGRLIDLVKRKATN 401
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV +LVLDEAD++F++G +P V++ +N P LFSAT VE LAR I
Sbjct: 402 LERVTFLVLDEADRMFDMG-----FEPQVRSIANHVRPDRQTLLFSATFRKKVERLARDI 456
Query: 116 MHDAVRVIVGRKNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ D +RVI G A+E + Q + + G + L +++ + + VLIFV K +
Sbjct: 457 LTDPIRVIQGDLGEANEDVVQIVECLSDGPAKWPWL-IKRLVSFTTEGSVLIFVTKKANS 515
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
+EL L G++H D+ Q++R + +F+ + +L+ATDV ARG+D + V+
Sbjct: 516 EELASNLKTHDFDLGLLHGDMDQSERNKVITNFKKQQMPILVATDVAARGLDIPSIKTVV 575
Query: 234 NYDFPDSGAAYIHRI 248
NYD + HRI
Sbjct: 576 NYDVARDIDTHTHRI 590
>gi|424029584|ref|ZP_17769110.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
gi|424038869|ref|ZP_17777363.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-02]
gi|408886270|gb|EKM24947.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
gi|408893631|gb|EKM30765.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-02]
Length = 430
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + + ++ +E+LV DEAD++ ++G + ++ ++P I+
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVANIEFLVFDEADRILDMGFIHAVRKIMLDVDTDPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT + LAR I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 184 --MFSATTSSQLNLLARDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A ++ EL DGI+A V H D +Q+ R A+++F+ GK V++A
Sbjct: 241 RKNWKQVLVFVNYKETANDVVKELKLDGIKAVVCHGDRAQSARRRALEEFKTGKARVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+NYD P Y+HRI
Sbjct: 301 TDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|365844881|ref|ZP_09385691.1| putative ATP-dependent RNA helicase RhlE [Flavonifractor plautii
ATCC 29863]
gi|364562600|gb|EHM40436.1| putative ATP-dependent RNA helicase RhlE [Flavonifractor plautii
ATCC 29863]
Length = 579
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DIL++TP RL +K IDLSR+E VLDEAD++ ++G + + ++ P+
Sbjct: 120 KNGVDILVATPGRLGDLYGQKLIDLSRLEIFVLDEADRMLDMG-FIHDVRRILGWL--PA 176
Query: 95 IVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAG-SEEGKLLALR 152
++LF SAT+P V+ L S++H+ V+V V ++ E I QKL + + +LLA
Sbjct: 177 QKQTLFFSATMPPEVQGLVDSLLHNPVKVAVDPISSPVEVIDQKLYYVDRGNKTRLLAAL 236
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ N L+F ++K A ++ G+L GI A IH + SQT R+ A+ DF++G
Sbjct: 237 IRELDVKN--ALVFTRTKHGANKVAGDLVKAGISAAAIHGNKSQTARQQALADFKSGAVQ 294
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + ++ V NY+ PD Y+HRI
Sbjct: 295 VLVATDIAARGLDIEELSHVFNYNLPDVPETYVHRI 330
>gi|302766257|ref|XP_002966549.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
gi|300165969|gb|EFJ32576.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
Length = 581
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 8/211 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS- 98
I+++TP RL + +KK++L R +YL LDEAD+L + G D + K + R
Sbjct: 278 IVVATPGRLNDMLEKKKMNLERCKYLTLDEADRLCDSG----FEDDIRKVMDHLKFQRQT 333
Query: 99 -LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
LFSAT+P ++E AR + V V V R AS + Q++ F +E +++ L + +
Sbjct: 334 LLFSATMPRKIQEFARGALVKPVVVNVARAGAASLDVVQQVEFV-KQEAEMVYLLECLQQ 392
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
+ PPVLIF +SK +Y L G+ IH Q +R++A+ F+ G+ VL+AT
Sbjct: 393 T-PPPVLIFCESKGEVDSIYEYLVLKGVEVVSIHGGKDQEERQDAITKFKQGRKDVLVAT 451
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ++G+DF + VINYD P Y+HRI
Sbjct: 452 DVASKGLDFPSIQHVINYDMPSEIENYVHRI 482
>gi|431931271|ref|YP_007244317.1| DNA/RNA helicase [Thioflavicoccus mobilis 8321]
gi|431829574|gb|AGA90687.1| DNA/RNA helicase, superfamily II [Thioflavicoccus mobilis 8321]
Length = 417
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DI+++TP RL + ++ +DLS +E LVLDEAD++ ++G + I V++ P+
Sbjct: 122 GVDIVVATPGRLLDHVGQRTLDLSGIEILVLDEADRMLDMG-FIHDIRRVLRLL--PTNR 178
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
+SL FSAT + +E+LA ++ D V + V R+NTA+E + Q LV ++E K L
Sbjct: 179 QSLLFSATYSNEIEQLANGLLRDPVTIAVARRNTAAEQVSQ-LVHPVAKERKRELLSHLI 237
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
VL+F ++K A L +L DGI A IH + SQ+ R NA+ F+ G L+
Sbjct: 238 HSQGWDQVLVFTRTKHGANRLTDQLVRDGIAAAAIHGNKSQSARTNALAGFKRGAVRALV 297
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 298 ATDIAARGLDIDQLPYVVNYELPNVPEDYVHRI 330
>gi|50549245|ref|XP_502093.1| YALI0C21472p [Yarrowia lipolytica]
gi|74659998|sp|Q6CB69.1|DED1_YARLI RecName: Full=ATP-dependent RNA helicase DED1
gi|49647960|emb|CAG82413.1| YALI0C21472p [Yarrowia lipolytica CLIB122]
Length = 618
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++ P RL I R K+ L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 294 GCDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEADRMLDMG-FEPQIRAIVQGSGMPDVN 352
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEG-KLLALR 152
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + E+G K+ AL
Sbjct: 353 ERQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYV--EDGDKISALL 410
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
+ + L+FV++K A L L + A IH D SQ RE A++ FR G T
Sbjct: 411 DILSAAGKGLTLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQRDRERALEMFRDGTTP 470
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 471 ILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRI 506
>gi|283769405|ref|ZP_06342304.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
gi|283104062|gb|EFC05446.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
Length = 425
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CDILI+TP RL + KI L +E+LVLDEAD++ ++G + + +V+ N I
Sbjct: 121 CDILIATPGRLLDYLAHGKISLRHIEFLVLDEADRMLDMG-FIADVRKIVQQIPNDRIT- 178
Query: 98 SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE 157
+LFSAT+P ++ELAR I+ + V + + + +I Q L++ K + + E
Sbjct: 179 ALFSATMPKEIQELARDILKNPKEVRIEAEKFTASTIDQYLIYTEKSSKKKVLVNLLNTE 238
Query: 158 SLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIAT 217
S+ ++F ++K A L L I VIH D +Q QR NA+ FR + +LIAT
Sbjct: 239 SIKK-TIVFTRTKIGADRLEKYLKEKEIACLVIHGDKTQGQRLNALQRFRTNQIRILIAT 297
Query: 218 DVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DV ARG+D K ++ VIN+D P+ Y+HRI
Sbjct: 298 DVAARGIDIKDISHVINFDLPEDIENYVHRI 328
>gi|402909693|ref|XP_003917545.1| PREDICTED: probable ATP-dependent RNA helicase DDX53 [Papio anubis]
Length = 632
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 135/256 (52%), Gaps = 16/256 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKID 58
LA Q EC K + + I + + + + D+SK DI+I+TP RL ++
Sbjct: 308 LALQVEAECSKYSYKDLKSICICGGRNRIGQREDISK-DVDIIIATPGRLNDLQMNNSVN 366
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKAC---SNPSIVRSLFSATLPDFVEELARSI 115
L + YLV+DEADK+ ++ +P + +P + SAT PD V LARS
Sbjct: 367 LRSITYLVMDEADKMLDM-----EFEPKIMKILLDVHPDRQTVMTSATWPDTVRRLARSY 421
Query: 116 MHDAVRVIVGRKNTAS-ESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVLIFVQSKER 172
+ D + V VG N A+ ++KQ ++ EE + AL Q F E ++P V++FV K
Sbjct: 422 LKDPMIVYVGNLNLAAVNTVKQNIIVTTEEEKR--ALTQEFIEHMSPNDKVIMFVTQKRI 479
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A +L + GI +H + Q+ +E A++DF +G +LI TD++ARG+D V V
Sbjct: 480 ADDLSSDFNIQGISVESLHGNSEQSDKERALEDFESGNIKILITTDLVARGLDVNDVTHV 539
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HR+
Sbjct: 540 YNYDFPWNIEEYVHRV 555
>gi|419957755|ref|ZP_14473821.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607913|gb|EIM37117.1| ATP-dependent RNA helicase RhlE [Enterobacter cloacae subsp.
cloacae GS1]
Length = 460
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 7/216 (3%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + + L +E LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALR 152
R LFSAT D ++ LA ++H+ + V V R+NTASE + Q + F + + L L
Sbjct: 179 TRRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKREL-LS 237
Query: 153 QSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTW 212
Q + VL+F ++K A L +L DGIR+ IH + SQ R A+ DF++G
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 213 VLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRI 333
>gi|290474026|ref|YP_003466900.1| ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus bovienii SS-2004]
gi|289173333|emb|CBJ80110.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
[Xenorhabdus bovienii SS-2004]
Length = 459
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS VE L+LDEAD++ ++G I + + S
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSHVEILILDEADRMLDMG----FIHDIRRVLSKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE-EGKLLAL 151
R LFSAT D ++ LA ++ D V + V R+N+ASE I Q + F + +G+LL+
Sbjct: 179 AKRQNLLFSATFSDDIKSLANKLLRDPVSIEVARRNSASEQIDQAVHFVDKKRKGELLSY 238
Query: 152 ---RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
Q++ + VL+F ++K A L +L+ DG+ A IH + SQ R A+ DF++
Sbjct: 239 MIGNQNWQQ-----VLVFTRTKHGANRLAEQLSQDGVTAAAIHGNKSQGARTRALADFKS 293
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G+ L+ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 294 GRIRALVATDIAARGLDIDQLPHVVNFELPNVAEDYVHRI 333
>gi|365760745|gb|EHN02442.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840222|gb|EJT43125.1| DBP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 40 ILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSL 99
++++TP RL ++ +DLS+V YLVLDEAD++ E G + I +++ +
Sbjct: 227 VVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKG-FEEDIRNIIRETDASKRQTLM 285
Query: 100 FSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLALRQSF 155
F+AT P V ELA + M + ++V +G + TA++ I Q ++V +E KLL L + +
Sbjct: 286 FTATWPKEVRELASTFMKNPIKVSIGNTDQLTANKKITQIVEVVDPRGKERKLLELLKKY 345
Query: 156 --AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
N VLIF K+ A + L ++G IH DLSQ QR A+++F++GK+ +
Sbjct: 346 HSGPKKNEKVLIFALYKKEATRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKSGKSNL 405
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 406 LLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRI 440
>gi|91228785|ref|ZP_01262694.1| putative ATP-dependent RNA helicase [Vibrio alginolyticus 12G01]
gi|91187660|gb|EAS73983.1| putative ATP-dependent RNA helicase [Vibrio alginolyticus 12G01]
Length = 430
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + + ++ +E+LV DEAD++ ++G + ++ ++P I+
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVAHLEFLVFDEADRILDMGFIHAVRKIMLDVDTDPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT + LA+ I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 184 --MFSATTSSQLNLLAKDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A E+ EL DGI+A V H D +Q+ R A+++F++GK V++A
Sbjct: 241 RKNWKQVLVFVNYKETANEVVKELKLDGIKAVVCHGDRAQSARRRALEEFKSGKARVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+NYD P Y+HRI
Sbjct: 301 TDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|380006437|gb|AFD29609.1| VASA-2 [Schmidtea mediterranea]
Length = 547
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
+R++ + + CDIL+STP RL + I L ++ YLVLDEAD+L + ++ I V
Sbjct: 236 MRTSMMKLYKCDILVSTPGRLVANLESAAISLDKIRYLVLDEADRLLQNEKFMESIKLVY 295
Query: 88 KACSNPSIVR---SLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSE 144
+ + + S+FSAT P +++L S++ D + V VG A+ IKQ ++ S
Sbjct: 296 EKSKLVGVDKFHVSMFSATFPAEIQQLGESLLSDHLFVAVGLVGAANTDIKQTVLQVNSH 355
Query: 145 EGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVD 204
+ KL A + + L+FVQ+K A L L + A IH D Q RE+A++
Sbjct: 356 D-KLNASLEYLTNNKTGKTLVFVQAKRFADFLGIRLIDLNLLATTIHGDRDQAARESALN 414
Query: 205 DFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
DF++G+ L+ATDV +RG+D V+ VIN D P+ YIHRI
Sbjct: 415 DFKSGRVNFLVATDVASRGLDIPKVDTVINIDMPEDMDVYIHRI 458
>gi|77362320|ref|YP_341894.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis TAC125]
gi|76877231|emb|CAI89448.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain;
DEAD-box protein family [Pseudoalteromonas haloplanktis
TAC125]
Length = 433
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K DI+++TP RL IR + L+ V++LVLDEAD++ ++G ++ + V+K+C++
Sbjct: 121 KEGVDIVVATPGRLLDHIRLGNLSLASVKHLVLDEADRMLDMG-FIEEMQGVIKSCADDR 179
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+ LFSAT P +++ A ++ V V + N+ + ++ +V+ E K L +
Sbjct: 180 QIL-LFSATFPAAIKQFASKVLKQPEIVRVDQTNSTASTVAH-VVYPVEERRKQELLSEL 237
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ VL+FV KE A EL EL DGI A V H D SQ R A+ +F+ GK VL
Sbjct: 238 IGKKNWQQVLVFVNMKETADELVTELNLDGIPAAVCHGDKSQGNRRRALREFKEGKVRVL 297
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT+V ARG+D G+ VIN D P Y+HRI
Sbjct: 298 VATEVAARGIDIDGLPRVINIDLPWLAEDYVHRI 331
>gi|329962827|ref|ZP_08300712.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
gi|328529384|gb|EGF56297.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
Length = 428
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 36 FSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKA 89
D++I+TP RL + +DLSRV Y +LDEAD++ ++G ++KH+ +
Sbjct: 124 LGADVVIATPGRLIAHLSLGYVDLSRVSYFILDEADRMLDMGFYDDIMQIVKHLPKERQT 183
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLL 149
+FSAT+P +++LA +I+++ V + A + ++ + E KL
Sbjct: 184 I--------MFSATMPAKIQQLANNILNNPAEVKLAVSKPADKIVQA--AYVCYENQKLG 233
Query: 150 ALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAG 209
+R FAE V+IF SK + KE+ L + G +HSDL Q QRE + +F+AG
Sbjct: 234 IIRSLFAEQTPERVIIFASSKIKVKEVTKALKQMKLNVGEMHSDLEQAQREEVMYEFKAG 293
Query: 210 KTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ +L+ATD++ARG+D + VINYD P Y+HRI
Sbjct: 294 RINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVHRI 332
>gi|300121126|emb|CBK21507.2| unnamed protein product [Blastocystis hominis]
Length = 518
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 9 CKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLD 68
C +A + M++ L D + CDIL+ TP R++ I+R + L + +LVLD
Sbjct: 243 CTGIASAVVYGGTPMREVL----DSLRSGCDILVGTPGRVKDMIQRGILGLEGITHLVLD 298
Query: 69 EADKLFEVGNLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEELARSIMHDAVRVIVGRK 127
EAD++ ++G I +V+ P ++L FSAT PD ++ LA + D V + VGR
Sbjct: 299 EADRMLDMG-FEPQIRDIVEQSGMPRNRQTLMFSATFPDEIQRLAGDFLIDYVFLAVGRV 357
Query: 128 NTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRA 187
A++ I+Q++++ + K L N +LIFV++K +A L L +A
Sbjct: 358 GGAAQDIEQRVIYV-EDADKDSYLLHELENWGNGRILIFVETKRKADILQRYLTTQHFQA 416
Query: 188 GVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
IH D SQ RE+A+ F+ + +L+ATDV ARG+D V+ VINYD P + Y+HR
Sbjct: 417 ASIHGDRSQADREDALSAFKLNRVQILVATDVAARGLDIPDVSLVINYDTPQNIEDYVHR 476
Query: 248 I 248
I
Sbjct: 477 I 477
>gi|254506284|ref|ZP_05118427.1| DNA and RNA helicase [Vibrio parahaemolyticus 16]
gi|219550764|gb|EED27746.1| DNA and RNA helicase [Vibrio parahaemolyticus 16]
Length = 426
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
D+L++TP RL + + L+ +E+LV DEAD++ ++G + I+ ++ A N
Sbjct: 124 GVDVLVATPGRLIEHMDMNNVSLANLEFLVFDEADRMLDMG-FISAIESIM-AGVNTKPQ 181
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
LFSAT + LA I+ RV V R+N +++I +V+ +E K L +
Sbjct: 182 TMLFSATFSAQMNTLAGKILRQPKRVSVARENVTADTIAH-VVYPVEQERKRELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A EL EL DGI+A + H D +Q+ R A+D+F++GK V+IA
Sbjct: 241 RKNWQQVLVFVNYKETANELVKELKLDGIKAVLCHGDKAQSARRRALDEFKSGKARVMIA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+N+D P Y+HRI
Sbjct: 301 TDVAARGLDIQNLPHVVNFDMPFLAEDYVHRI 332
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 130/220 (59%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ + DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 120 DMLRKGIDILVATPGRLLDLMNQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKL-- 177
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L +S++ + V++ + K++ +SI Q + F +E
Sbjct: 178 ---PKEKQTLFFSATMPDTIVTLTKSLLKNPVKIYITPKSSTVDSINQVVYFVEKKEKSQ 234
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L ++ + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 235 L-LISILQKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 293
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 294 GKTRVMVATDIASRGIDISELPMVINYDLPDVPETYVHRI 333
>gi|322703781|gb|EFY95385.1| ATP-dependent RNA helicase ded-1 [Metarhizium anisopliae ARSEF 23]
Length = 665
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P +
Sbjct: 311 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPVA 369
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 370 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDI 429
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ A L LIFV++K A L L A IH D +Q +RE A++ FR G+
Sbjct: 430 LHTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRERERALEFFRNGRC 486
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 487 PILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRI 523
>gi|296273966|ref|YP_003656597.1| DEAD/DEAH box helicase [Arcobacter nitrofigilis DSM 7299]
gi|296098140|gb|ADG94090.1| DEAD/DEAH box helicase domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 480
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DI+I+TP RL I +K ID+S VE+ +LDEAD++ ++G ++ I V+ PS
Sbjct: 124 GVDIVIATPGRLLDHIEQKTIDISHVEHFILDEADRMLDMG-FIRDIRKVLALL--PSHR 180
Query: 97 RSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSF 155
++L FSAT D +++L+ I++ + V R+NT+SE + Q + + K L L +
Sbjct: 181 QNLLFSATFSDEIKKLSDGILNKPKLIEVARRNTSSEMVSQVIHLVDKDRKKTL-LSKLI 239
Query: 156 AESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E VL+F ++K A +L +L DGI A IH + SQ R A+ DF+AG VL+
Sbjct: 240 KEGDWRQVLVFTRTKHGANKLSQQLEIDGITATAIHGNKSQGARTKALADFKAGAVRVLV 299
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
ATD+ ARG+D + V+N++ P+ Y+HRI
Sbjct: 300 ATDIAARGIDIDQLPHVVNFELPNVAEDYVHRI 332
>gi|440227497|ref|YP_007334588.1| ATP-dependent RNA helicase protein [Rhizobium tropici CIAT 899]
gi|440039008|gb|AGB72042.1| ATP-dependent RNA helicase protein [Rhizobium tropici CIAT 899]
Length = 548
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 6/214 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPS 94
DIL++TP RL I R+ + L V +LVLDEAD++ ++G + L+ I +V A
Sbjct: 125 GTDILVATPGRLLDLINRRALSLGHVTHLVLDEADQMLDLGFIHDLRKIAKMVPAKRQ-- 182
Query: 95 IVRSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
LFSAT+P + +LA + + V+V V A++ ++Q + F + K L+++
Sbjct: 183 --TLLFSATMPKAIGDLASDYLTNPVKVEVSPPGKAADKVEQYVHFVAGQNHKTEILKET 240
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
+ + + ++F+++K A++L L G A IH + SQ QRE A+ FR G VL
Sbjct: 241 ISANPDGRAIVFLRTKHGAEKLMKHLDHVGFAAASIHGNKSQGQRERALKGFRDGDVRVL 300
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+ATDV ARG+D GV+ V N+D P+ AY+HRI
Sbjct: 301 VATDVAARGIDIPGVSHVYNFDLPEVPDAYVHRI 334
>gi|319790474|ref|YP_004152107.1| DEAD/DEAH box helicase domain protein [Thermovibrio ammonificans
HB-1]
gi|317114976|gb|ADU97466.1| DEAD/DEAH box helicase domain protein [Thermovibrio ammonificans
HB-1]
Length = 417
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 126/218 (57%), Gaps = 7/218 (3%)
Query: 33 LSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN 92
L + I++ TP R++ I R + L RV Y VLDEAD++ ++G ++ I+ ++
Sbjct: 116 LKRGRHQIIVGTPGRVKDLINRGVLRLDRVRYAVLDEADQMLDMG-FIEDIEEIL--SKT 172
Query: 93 PSIVRSL-FSATLPDFVEEL-ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLA 150
P ++L FSAT+P + L R + D V VG K + +KQ+++ SE+ K+ A
Sbjct: 173 PKEKQTLLFSATMPYEIRRLIGRYLKPDYKNVKVG-KQLITPKVKQRIILVRSED-KIKA 230
Query: 151 LRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGK 210
L + E ++FV++K A ++ EL GI A IH DLSQ QRE + FR GK
Sbjct: 231 LEKLLKEHEGVSTIVFVKTKRDAADIEKELQRRGINARAIHGDLSQRQREFVMRAFREGK 290
Query: 211 TWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
VL+ATDV ARG+D K V VINY+ P++ +Y+HRI
Sbjct: 291 VKVLVATDVAARGIDIKDVGLVINYELPENPESYVHRI 328
>gi|262396801|ref|YP_003288654.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
gi|269966728|ref|ZP_06180805.1| putative ATP-dependent RNA helicase [Vibrio alginolyticus 40B]
gi|451970457|ref|ZP_21923683.1| ATP-dependent RNA helicase [Vibrio alginolyticus E0666]
gi|262340395|gb|ACY54189.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
gi|269828651|gb|EEZ82908.1| putative ATP-dependent RNA helicase [Vibrio alginolyticus 40B]
gi|451933543|gb|EMD81211.1| ATP-dependent RNA helicase [Vibrio alginolyticus E0666]
Length = 430
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DIL++TP RL I + + ++ +E+LV DEAD++ ++G + ++ ++P I+
Sbjct: 124 GVDILVATPGRLEEHIEQGNVSVAHLEFLVFDEADRILDMGFIHAVRKIMLDVDTDPQIM 183
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
+FSAT + LA+ I+ R+ V R NT ++++ +++ +E K L +
Sbjct: 184 --MFSATTSSQLNLLAKDILRKPKRIEVERANTTAQTVAH-VLYPVDQERKTELLSELIG 240
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+FV KE A E+ EL DGI+A V H D +Q+ R A+++F++GK V++A
Sbjct: 241 RKNWKQVLVFVNYKETANEVVKELKLDGIKAVVCHGDRAQSARRRALEEFKSGKARVMVA 300
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+NYD P Y+HRI
Sbjct: 301 TDVAARGLDIEDLPHVVNYDMPFLAEDYVHRI 332
>gi|390600057|gb|EIN09452.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 639
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P +
Sbjct: 303 GCDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVQ 361
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I Q++ F + + + L
Sbjct: 362 DRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQRIEFVEDHDKRSMLLDI 421
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A+ L+FV++K A L L A IH D +Q +RE A+ FR G+T +
Sbjct: 422 LTAQEKQGLTLVFVETKRMADMLSDFLYQSQFPATSIHGDRTQREREMALQTFRTGRTPI 481
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 482 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 516
>gi|357117717|ref|XP_003560609.1| PREDICTED: putative cellulose synthase A catalytic subunit 11
[UDP-forming]-like [Brachypodium distachyon]
Length = 1265
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 22/258 (8%)
Query: 8 ECKKLAKGNKFQIKL------MKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSR 61
E KK + ++K+ M ++L DL K D+L++TP RL + R K+ L
Sbjct: 858 EAKKFSHLTGLRVKVAYGGTPMYQQL---RDLEK-GVDVLVATPGRLVDMVERAKVSLEA 913
Query: 62 VEYLVLDEADKLFEVGNLLKHIDPVVKACSNP--SIVRS-LFSATLPDFVEELARSIMHD 118
++YLV+DEAD++ ++G I +V P S+ ++ LFSAT P ++ LA +
Sbjct: 914 IKYLVMDEADRMLDMG-FEPQIRKIVDGMGMPRKSVRQTMLFSATFPPQIQRLASDFLSK 972
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLAL----RQSFAES----LNPPVLIFVQSK 170
+ + VGR ++++ I QK+ F E ++ L +QS S P L+FV++K
Sbjct: 973 YIFITVGRVGSSTDLITQKVEFLSDGEKRIYLLDLLQKQSVGSSDGKLQQPLTLVFVETK 1032
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
A L L G A IH D +Q +RE+A+ F++G T +++ATDV +RG+D V
Sbjct: 1033 READSLRYWLYNKGFPATAIHGDRTQEERESALRSFKSGLTPIMVATDVASRGLDVPNVG 1092
Query: 231 CVINYDFPDSGAAYIHRI 248
VINYD P S Y+HRI
Sbjct: 1093 HVINYDLPKSIEDYVHRI 1110
>gi|238753347|ref|ZP_04614710.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
gi|238708300|gb|EEQ00655.1| ATP-dependent RNA helicase rhlE [Yersinia ruckeri ATCC 29473]
Length = 453
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++TP RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++++ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLNNPASVEVARRNTASEQITQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGSQNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|443924399|gb|ELU43422.1| ATP-dependent RNA helicase ded-1 [Rhizoctonia solani AG-1 IA]
Length = 274
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L +TP RL I R +I L+ V+YLVLDEAD++ ++G I +V+ P ++
Sbjct: 41 GCDLLSATPGRLVDLIERGRISLANVQYLVLDEADRMLDMG-FEPQIRRIVQGEDMPGVM 99
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LA+ + + + + VGR + SE+I QK+ + ++ + + L
Sbjct: 100 DRQTLMFSATFPRDIQLLAKDFLKEYIFLSVGRVGSTSENITQKIEYVEDQDKRSVLLDI 159
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+E L+FV++K A L L + A IH D +Q +RE A+ FR+G+T +
Sbjct: 160 LHSEPQGGLTLVFVETKRMADMLSEYLMNNRFPATSIHGDRTQRERELALSTFRSGRTPI 219
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
++AT V ARG+D V V+NYD P Y+HRI
Sbjct: 220 MVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRI 254
>gi|380696525|ref|ZP_09861384.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 374
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 9/220 (4%)
Query: 32 DLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNL--LKHIDPVVKA 89
D+ DIL++TP RL + + I L ++Y VLDEAD++ ++G + +K I P +
Sbjct: 119 DMLHKGIDILVATPGRLLDLMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKL-- 176
Query: 90 CSNPSIVRSLF-SATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKL 148
P ++LF SAT+PD + L S++ + V++ V K++ +SIKQ + F +E
Sbjct: 177 ---PKEKQTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSQ 233
Query: 149 LALRQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
L L +S + VLIF ++K A ++ L GI + IH + SQ R++A+ +F++
Sbjct: 234 L-LISILQKSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKS 292
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
GKT V++ATD+ +RG+D + VINYD PD Y+HRI
Sbjct: 293 GKTRVMVATDIASRGIDINELPLVINYDLPDVPETYVHRI 332
>gi|358389632|gb|EHK27224.1| hypothetical protein TRIVIDRAFT_85827 [Trichoderma virens Gv29-8]
Length = 670
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 315 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVA 373
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D V + VGR + SE+I QK+ F + + LL +
Sbjct: 374 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEFVEDIDKRSVLLDI 433
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ A L LIFV++K A L L A IH D +Q +RE A++ FR G+
Sbjct: 434 LHTHAGGL---TLIFVETKRMADSLSDFLINQSFPATSIHGDRTQRERERALEFFRNGRC 490
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 491 PILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRI 527
>gi|189193873|ref|XP_001933275.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978839|gb|EDU45465.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 686
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L+ ++YLVLDEAD++ ++G I +V+ P
Sbjct: 330 GCDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPPTA 388
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+ + + + LL +
Sbjct: 389 GRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDVDKRSVLLDI 448
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L+ LIFV++K A L L G A IH D +Q +RE A++ FR G+
Sbjct: 449 LHTHGAGLS---LIFVETKRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRTGRC 505
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V V+NYD P Y+HRI
Sbjct: 506 PILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRI 542
>gi|363894343|ref|ZP_09321430.1| hypothetical protein HMPREF9629_01756 [Eubacteriaceae bacterium
ACC19a]
gi|361962509|gb|EHL15632.1| hypothetical protein HMPREF9629_01756 [Eubacteriaceae bacterium
ACC19a]
Length = 383
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+ ++++TP RL IR I++ + L++DEAD++ E G L + K N IV
Sbjct: 120 NSQLIVATPGRLLEHIRAGNINMKYIRQLIIDEADQMLEYGFLEDIVLLKDKLPDNLQIV 179
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
L SAT+P + +LA+ ++ + V++ + ++NT +++I+Q L+F SE+ KL L+
Sbjct: 180 --LLSATMPKPIIDLAKKLIKNPVKIDITQENTVTDNIEQ-LIFKTSEKNKLSTLK-FVI 235
Query: 157 ESLNPPV-LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLI 215
E NP + +IF SK+ A++LY + DG ++H D SQ +RE ++ FR K L+
Sbjct: 236 EQYNPFMAIIFCNSKKNAEKLYELMGVDGYDCDILHGDFSQKKREFILEQFRKMKFRFLV 295
Query: 216 ATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+TD+ ARG D GV VINY+ P YIHRI
Sbjct: 296 STDLSARGFDIDGVTHVINYEIPADHKYYIHRI 328
>gi|317047409|ref|YP_004115057.1| DEAD/DEAH box helicase [Pantoea sp. At-9b]
gi|316949026|gb|ADU68501.1| DEAD/DEAH box helicase domain protein [Pantoea sp. At-9b]
Length = 451
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ D+L++TP RL + +DLS VE LVLDEAD++ ++G I + + +
Sbjct: 123 RGGVDVLVATPGRLLDLAHQNAVDLSHVEILVLDEADRMLDMG----FIHDIRRVLAKLP 178
Query: 95 IVRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK-LLAL 151
R LFSAT D ++ LA ++++ +V V R+NTASE + Q++ F + + LL+L
Sbjct: 179 AKRQNLLFSATFSDEIKSLAEKLLNNPEQVEVARRNTASEQVSQQVHFVDKKRKRELLSL 238
Query: 152 ---RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRA 208
R ++ + VL+F ++K A L +L DGI A IH + SQ R A+ DF++
Sbjct: 239 MIGRDNWQQ-----VLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKS 293
Query: 209 GKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G VL+ATD+ ARG+D + + V+NY+ P+ Y+HRI
Sbjct: 294 GGIRVLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRI 333
>gi|365538739|ref|ZP_09363914.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
Length = 421
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
DILI+TP RL + + I L++ E LVLDEAD++ ++G L I +++ N
Sbjct: 131 GTDILIATPGRLIDHLFVRNIILTQTEVLVLDEADRMLDMG-FLPDIQRILQRM-NDERQ 188
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFA 156
FSAT D ++ LA +M D V V + N ++++KQ +V+ ++ K L
Sbjct: 189 TLFFSATFDDKIKALAHKMMRDPVGVQISPANATADTVKQ-IVYPVDKKRKSELLAYLIG 247
Query: 157 ESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIA 216
VL+F ++K + EL EL DGI+A I+ D SQ R+ A+DDF+AGK LIA
Sbjct: 248 SRNWQQVLVFTKTKRGSDELAKELKLDGIKAASINGDKSQGARQKALDDFKAGKVRALIA 307
Query: 217 TDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
TDV ARG+D + + V+NYD P Y+HRI
Sbjct: 308 TDVAARGIDIQQLEQVVNYDMPYKAEDYVHRI 339
>gi|170099095|ref|XP_001880766.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644291|gb|EDR08541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 498
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 16/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K ++ + + + + +I+I+TP RL + +K +
Sbjct: 146 LAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLETQKTN 205
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLV+DEAD++ ++G +P ++ + P +FSAT P V++LA
Sbjct: 206 LRRVTYLVMDEADRMLDMG-----FEPQIRKIVSQIRPDRQTLMFSATWPKDVQKLANDF 260
Query: 116 MHDAVRVIVGRKN-TASESIKQKLVFAGSEE--GKLLA-LRQSFAESLNPPVLIFVQSKE 171
+ D ++V +G TA+ +I+Q + E KL+ L Q AE N VLIFV +K
Sbjct: 261 LRDMIQVNIGSMELTANHNIQQIVEVCSDFEKRNKLIKHLDQISAE--NAKVLIFVATKR 318
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
A ++ L DG A IH D Q +R+ + +F+AG++ +LIATDV +RG+D K V
Sbjct: 319 VADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILIATDVASRGLDVKDVGY 378
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP++ YIHRI
Sbjct: 379 VINYDFPNNCEDYIHRI 395
>gi|50312211|ref|XP_456137.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660243|sp|Q6CIV2.1|DBP2_KLULA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49645273|emb|CAG98845.1| KLLA0F23716p [Kluyveromyces lactis]
Length = 554
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K ++ + + + +S + +ILI+TP RL + K +
Sbjct: 198 LAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTN 257
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LA
Sbjct: 258 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDY 312
Query: 116 MHDAVRVIVGR-KNTASESIKQKL-VFAGSEEGKLLALR-QSFAESLNPPVLIFVQSKER 172
+HD ++V +G + +AS +I Q + V E+ LA ++ ++ + ++IF +K
Sbjct: 313 LHDPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKHLETASQDQDSKIIIFASTKRT 372
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L +G A IH D +Q +R+ + +FR+G++ +++ATDV ARG+D KG+N V
Sbjct: 373 CDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKGINYV 432
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 433 INYDMPGNIEDYVHRI 448
>gi|308071203|ref|YP_003872808.1| ATP-dependent RNA helicase [Paenibacillus polymyxa E681]
gi|305860482|gb|ADM72270.1| Probable ATP-dependent RNA helicase [Paenibacillus polymyxa E681]
Length = 559
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLM----KKELVRSTDLSKFSCDILISTPLRLRLAIRRKK 56
LA Q T E +LA + + L+ +++ R K ++I TP RL +RR
Sbjct: 92 LALQITEEANRLAA-TEPSLSLLAVYGGQDVERQLRKLKGGAQLIIGTPGRLLDHLRRGT 150
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS-LFSATLPDFVEELARSI 115
+DL ++ LVLDEAD++ +G L ++ +++ P ++ LFSAT+P + +LAR
Sbjct: 151 LDLGGIKMLVLDEADQMLHMG-FLNDVETILQEV--PYRRQTMLFSATMPAGIRKLARVY 207
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNP--PVL--IFVQSKE 171
M++ V V V ++ S +++V ++ GK +Q+ + LN P L IF ++K
Sbjct: 208 MNEPVDVKVKSASSVPVSQIRQVVVQTTDRGK----QQALVDMLNTDRPYLAVIFCRTKR 263
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
RA +L EL G +G +H DLSQ +RE + FR K +L+ATDV ARG+D +GV
Sbjct: 264 RAAKLNEELQEMGFESGELHGDLSQNKREQVMKAFREAKLQLLVATDVAARGLDVEGVTH 323
Query: 232 VINYDFPDSGAAYIHRI 248
V NYD P +YIHRI
Sbjct: 324 VFNYDMPQDAESYIHRI 340
>gi|384413821|ref|YP_005623183.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|320014325|gb|ADV97896.1| putative ATP-dependent RNA helicase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 451
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
+ DIL++T RL + +DLS++E LVLDEAD++ ++G + I V+ P+
Sbjct: 123 RGGVDILVATHGRLLDLEHQNAVDLSKIEILVLDEADRMLDMG-FIHDIRRVLAKL--PA 179
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT D ++ LA ++H+ V V R+NTASE I Q + F + L L Q
Sbjct: 180 KRQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKREL-LSQ 238
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
E VL+F ++K A L +L DGI A IH + SQ R A+ DF+ GK V
Sbjct: 239 MIGEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRV 298
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+ATD+ ARG+D + V+NY+ P+ Y+HRI
Sbjct: 299 LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRI 333
>gi|349605966|gb|AEQ01028.1| ATP-dependent RNA helicase DDX3X-like protein, partial [Equus
caballus]
Length = 452
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 2/214 (0%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C +L++TP RL + R KI L +YLVLDEAD++ ++G + V + P V
Sbjct: 106 GCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV 165
Query: 97 RS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
R +FSAT P ++ LAR + + + + VGR + SE+I QK+V+ + + L
Sbjct: 166 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL 225
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A + L+FV++K+ A L L +G IH D SQ RE A+ FR+GK+ +L
Sbjct: 226 NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPIL 285
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VIN+D P Y+HRI
Sbjct: 286 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 319
>gi|255572963|ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 505
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K ++ + + + + DL K +I+I+TP RL +
Sbjct: 184 LAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQK-GVEIVIATPGRLIDMLESHHT 242
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G DP ++ + P +SAT P VE+LAR
Sbjct: 243 NLRRVTYLVLDEADRMLDMG-----FDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQ 297
Query: 115 IMHDAVRVIVGRKN-TASESIKQK--LVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKE 171
+++ +V++G + A+ +I+Q +V + KL+ L + + +LIF+ +K+
Sbjct: 298 FLYNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSR--ILIFMDTKK 355
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +F+AGK+ ++ ATDV ARG+D K V
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKF 415
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 416 VINYDFPGSLEDYVHRI 432
>gi|372210459|ref|ZP_09498261.1| DEAD/DEAH box helicase [Flavobacteriaceae bacterium S85]
Length = 605
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 9/216 (4%)
Query: 35 KFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPS 94
K I++ TP R I R+K+ L +++LVLDEAD++ +G +D V++A P
Sbjct: 120 KKGAQIVVGTPGRTVDLISRRKLKLENIQWLVLDEADEMLNMG-FKDDLDAVLEAT--PE 176
Query: 95 IVRSL-FSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
++L FSAT P VE +AR+ M++ V G KNT S+++ + + +E + A+++
Sbjct: 177 TKQTLLFSATFPKEVEAIARNYMYNPAEVEAGTKNTGSDNVSNEY-YVVTERNRYAAIKR 235
Query: 154 SFAESLNPPV--LIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+NP + +IF +++ +E+ +L DG A +H DLSQ QR++ + FR
Sbjct: 236 --IADINPDIYGIIFCRTRRECQEVSEKLIADGYNADSLHGDLSQAQRDSVMQKFRNKNI 293
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHR 247
+L+ATDV ARG+D + VIN+ PD AY HR
Sbjct: 294 QMLVATDVAARGLDVNNLTHVINHKLPDQNEAYTHR 329
>gi|448098046|ref|XP_004198829.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
gi|359380251|emb|CCE82492.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 130/217 (59%), Gaps = 6/217 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
+++++TP RL I I+L V+YLVLDEAD++ E G + I +++ + S
Sbjct: 261 GANVVVATPGRLIDIINDGAINLGTVDYLVLDEADRMLEKG-FEQDIKTIMQNTAGASRQ 319
Query: 97 RSLFSATLPDFVEELARSIMHDAVRVIVGRKN--TASESIKQ--KLVFAGSEEGKLLAL- 151
+F+AT P V ELA S M++ V+V +G ++ A++ I+Q +++ +E KLL+L
Sbjct: 320 TVMFTATWPKEVRELASSFMNNPVKVNIGNRDELVANKRIEQIVEVIEPYHKENKLLSLL 379
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
R+ +++ N +LIF K+ A+ + L + IH DLSQ QR +A+D F++G++
Sbjct: 380 RKYQSKNKNDKILIFALYKKEARRIESLLQRNSFEVAAIHGDLSQQQRTSALDAFKSGRS 439
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+ATDV ARG+D V VIN FP + Y+HRI
Sbjct: 440 SLLLATDVAARGLDIPNVKIVINLTFPLTVEDYVHRI 476
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 142/257 (55%), Gaps = 17/257 (6%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST---DLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E K +K + + + + DL K +I+I+TP RL I
Sbjct: 176 LAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQK-GVEIVIATPGRLIDMIESHHT 234
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARS 114
+L RV YLVLDEAD++ ++G +P +K + P +SAT P VE+LAR+
Sbjct: 235 NLRRVTYLVLDEADRMLDMG-----FEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARN 289
Query: 115 IMHDAVRVIVGRKN-TASESIKQKL-VFAGSEE-GKLLALRQSFAESLNPPVLIFVQSKE 171
+ D +VI+G + A+ +I Q + + + S++ KL+ L + + +LIF+ +K+
Sbjct: 290 FLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSR--ILIFMDTKK 347
Query: 172 RAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNC 231
++ +L DG A IH D SQ +R+ + +F++GK+ ++ ATDV ARG+D K V
Sbjct: 348 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKY 407
Query: 232 VINYDFPDSGAAYIHRI 248
VINYDFP S Y+HRI
Sbjct: 408 VINYDFPGSLEDYVHRI 424
>gi|190571463|ref|YP_001975821.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|190357735|emb|CAQ55186.1| ATP-dependent RNA helicase, DeaD/DeaH box family [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
Length = 408
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 140/260 (53%), Gaps = 25/260 (9%)
Query: 1 LATQTTRECKKL-AKGNKFQIKLM--KKELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
LA Q T E +KL ++ + ++ L+ + + R + + I+I TP R+ I RK +
Sbjct: 82 LAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQKKPQIIIGTPGRIIDHIERKTL 141
Query: 58 DLSRVEYLVLDEADKLFEVG------NLLKHIDPVVKACSNPSIVRSL-FSATLPDFVEE 110
V LVLDE D++F++G ++KH+ P I ++L FSATLP + +
Sbjct: 142 VTRNVGILVLDETDRMFDMGFGIQIEEIMKHL---------PKIRQTLMFSATLPGEIVK 192
Query: 111 LARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEE--GKLLALRQSFAESLNPPVLIFVQ 168
L ++ RV V + T S IKQ++V+A E GKL+ S ++IFV+
Sbjct: 193 LTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRKGS----IIIFVK 248
Query: 169 SKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKG 228
+K A +L +L D A IH DL Q +RE +D FR G+ +++ATDV +RG+D
Sbjct: 249 TKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVASRGLDIPH 308
Query: 229 VNCVINYDFPDSGAAYIHRI 248
+ VINYD P S A Y+HRI
Sbjct: 309 IQHVINYDVPQSQADYVHRI 328
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,448,437,716
Number of Sequences: 23463169
Number of extensions: 129367209
Number of successful extensions: 431886
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 34394
Number of HSP's successfully gapped in prelim test: 3336
Number of HSP's that attempted gapping in prelim test: 353147
Number of HSP's gapped (non-prelim): 43852
length of query: 248
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 109
effective length of database: 9,097,814,876
effective search space: 991661821484
effective search space used: 991661821484
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)