BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042003
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana
GN=RH57 PE=2 SV=1
Length = 541
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/248 (80%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QT RE KKL KG+ F I+LM K LV++ D SK CD+LISTP+RL+ AI+ KKIDLS
Sbjct: 222 LAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLS 281
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
+VEYLVLDE+DKLFE +LLK ID VVKACSNPSI+RSLFSATLPD VEELARSIMHDAV
Sbjct: 282 KVEYLVLDESDKLFE-QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAV 340
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVI+GRKNTASE++KQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 341 RVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDEL 400
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
+ IRAGVIHSDL +RENAVD FRAG+ WVLIATDVIARGMDFKG+NCVINYDFPDS
Sbjct: 401 KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDS 460
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 461 ASAYIHRI 468
>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp.
japonica GN=Os07g0647900 PE=2 SV=2
Length = 540
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/248 (77%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSCDILISTPLRLRLAIRRKKIDLS 60
LA QTTRECKKLAKG KF IKLM K+L +S + CDILISTPLRL A++++ +DLS
Sbjct: 227 LAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLS 286
Query: 61 RVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDAV 120
RVEYLVLDE+DKLFE+G ++ ID VVKACSNPSI+RSLFSATLPD +E LAR+IMHDAV
Sbjct: 287 RVEYLVLDESDKLFELG-FVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAV 345
Query: 121 RVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGEL 180
RVIVGRKN+AS IKQKL+FAG+E+GKLLALRQSFAESLNPPVLIFVQSKERAKELY EL
Sbjct: 346 RVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKEL 405
Query: 181 AFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
AFD +RA VIH+DL + QR++AVD+ RAGKTWVLIAT+VIARGMDFKGVNCVINYDFP+S
Sbjct: 406 AFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPES 465
Query: 241 GAAYIHRI 248
+AYIHRI
Sbjct: 466 ASAYIHRI 473
>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium
discoideum GN=ddx52 PE=3 SV=1
Length = 668
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 171/250 (68%), Gaps = 3/250 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q R + L+KG F+I ++ K L + + DILI+TPLRL I+ +
Sbjct: 280 LAQQIYRNFRLLSKGKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLS 339
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHD 118
L++VEYLV DEADKLF+ N + +D VV AC NP + LFSAT+ VEEL SIM +
Sbjct: 340 LNKVEYLVFDEADKLFD-KNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKN 398
Query: 119 AVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYG 178
+++I+G +N A+ ++ QKL++ G EEGKLLA+RQ + L PP+LIF QSKERA +L+
Sbjct: 399 PIKIIIGEQNAAAITVDQKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQ 458
Query: 179 ELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
EL FDGI VIHS+ +Q QR+ V FR GK WVLI T+++ARGMDFKGVN VIN+DFP
Sbjct: 459 ELIFDGINVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFP 518
Query: 239 DSGAAYIHRI 248
+ A+YIHRI
Sbjct: 519 HTLASYIHRI 528
>sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ROK1 PE=3 SV=1
Length = 558
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/252 (50%), Positives = 173/252 (68%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q +E + L +G K + ++ K+L + D+ K S DI++STPLRL ++ +K+
Sbjct: 206 LAIQIFQELQILTRGKKLNVAILSKQLANKLNNDIVKASKYDIIVSTPLRLIDIVKNEKV 265
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+VE LV+DEADKLF+ G ++ D ++ C+ I +S+FSAT+P VEE+A SIM
Sbjct: 266 DLSKVEQLVIDEADKLFDQG-FVEQTDDILSHCTYTKIRKSMFSATIPSGVEEMAHSIMR 324
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+GRK AS +I QKLVF GSEEGKLLA+RQ E PP++IF+QS RAK L
Sbjct: 325 DPIRVIIGRKEAASNTIDQKLVFTGSEEGKLLAIRQMIQEGEFKPPIIIFLQSIHRAKAL 384
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 385 FHELLYDKLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYD 444
Query: 237 FPDSGAAYIHRI 248
P + AY+HRI
Sbjct: 445 VPQTAQAYVHRI 456
>sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ROK1 PE=3 SV=2
Length = 550
Score = 248 bits (632), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 172/252 (68%), Gaps = 5/252 (1%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKKI 57
LA Q +E + KG K +I ++ K+L + ++ DIL+STPLRL +I+ + I
Sbjct: 199 LAVQIFQELNTMTKGKKMKIGILSKQLANKINNKIINSSKYDILVSTPLRLIDSIKNETI 258
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
LS+VE LV+DE DKLF+ G ++ D ++ C+N + +S+FSAT+P VEE+A+SIM
Sbjct: 259 SLSKVEQLVIDETDKLFDQG-FVEQTDEILSNCTNTKLRKSMFSATIPSGVEEMAQSIMK 317
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK L
Sbjct: 318 DPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQQGEFKPPIIIFLQSITRAKAL 377
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F++G WVLI TDVIARG+DFKGVN VINYD
Sbjct: 378 FHELLYDRLNVDVIHAERTPKQRDEVIKRFKSGDIWVLITTDVIARGVDFKGVNLVINYD 437
Query: 237 FPDSGAAYIHRI 248
P S AY+HRI
Sbjct: 438 VPQSAQAYVHRI 449
>sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ROK1
PE=3 SV=1
Length = 569
Score = 240 bits (612), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KLA K + L+ K L +++ +S DI+ISTPLRL
Sbjct: 206 LANQIFDECSKLAQRIFLEKKRPLSVALLSKSLAAKLKNQIVSDKKYDIIISTPLRLIDI 265
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V+YL+ DEADKLF+ ++ D ++ ACS+P+I + LFSATLP VEEL
Sbjct: 266 VKSESLDLSAVKYLIFDEADKLFD-KTFVEQTDDILSACSHPNISKVLFSATLPSSVEEL 324
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESL-NPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKLVF G+EEGKL+A+RQ E + PPV+IF++S
Sbjct: 325 AQSIMTDPVRVIIGHKEAANTNIEQKLVFCGNEEGKLVAIRQLIQEGMFRPPVIIFLESI 384
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK L+ EL +D + VIH++ +Q QRE ++ F++G W LI TDV+ARG+DFKG+N
Sbjct: 385 TRAKALFHELLYDKLNVDVIHAERTQVQREKIIERFKSGDLWCLICTDVLARGIDFKGIN 444
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 445 LVINYDVPRSAQAYVH 460
>sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=ROK1 PE=3 SV=2
Length = 537
Score = 237 bits (605), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 170/254 (66%), Gaps = 9/254 (3%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDL-----SKFSCDILISTPLRLRLAIRRK 55
LA Q + + +G+ + L+ K++ +KF D+LI TPLRL ++++
Sbjct: 190 LAIQIYQTLAPMCRGSNLNVTLLSKQVASKISSSIISANKF--DVLICTPLRLIDLVKKE 247
Query: 56 KIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSI 115
++DLS+VE+LV+DEADKLF+ G ++ D ++ C+ P+ S+FSAT+P VEE+A SI
Sbjct: 248 QVDLSKVEHLVIDEADKLFDHG-FVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSI 306
Query: 116 MHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAK 174
M D +R+IVG K AS SI QKLVF G+EEGKLLA+RQ + PP++IF+QS RAK
Sbjct: 307 MKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQMVQQGEFKPPIIIFLQSIPRAK 366
Query: 175 ELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVIN 234
L+ EL +D + VIH++ + QRE A+ F+ G WVLI TDV+ARG+DFKGVN VIN
Sbjct: 367 ALFHELIYDKLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVIN 426
Query: 235 YDFPDSGAAYIHRI 248
YD P + AY+HRI
Sbjct: 427 YDVPQTSQAYVHRI 440
>sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=ROK1 PE=3 SV=1
Length = 553
Score = 237 bits (604), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 168/250 (67%), Gaps = 5/250 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR--STDLSKFS-CDILISTPLRLRLAIRRKKI 57
LA Q ++ + ++KG I ++ K+L S D+ K S DIL+STPLRL ++ K+
Sbjct: 204 LAVQIFQQLEIISKGKGLNIAILSKQLAGKISNDVVKASKYDILVSTPLRLIDVVKLGKV 263
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
DLS+V LV+DEADKLF+ G + D ++ C+N I +S+FSAT+P VEE+A SIM
Sbjct: 264 DLSKVTQLVIDEADKLFDHG-FAEQTDELLSHCTNVKIRKSMFSATIPSGVEEMAHSIMK 322
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +RVI+G K AS +I+QKLVF G+EEGKLLA+RQ PP++IF+QS RAK L
Sbjct: 323 DPIRVIIGHKEAASNTIEQKLVFTGNEEGKLLAIRQMIQNGEFKPPIIIFLQSITRAKAL 382
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
+ EL +D + VIH++ + QR+ + F+ G WVLI TDV+ARG+DFKGVN VINYD
Sbjct: 383 FHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYD 442
Query: 237 FPDSGAAYIH 246
P S AY+H
Sbjct: 443 VPQSAQAYVH 452
>sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ROK1 PE=3 SV=1
Length = 565
Score = 236 bits (603), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLAK------GNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LATQ EC KL+K Q+ ++ K L +R+ +S D++ISTPLRL
Sbjct: 206 LATQIFNECVKLSKRIYLDKKRPLQVAILSKSLGAKLRNKVISDKKYDLIISTPLRLIDV 265
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS V++L+ DEADKLF+ ++ D ++ +C++PS+ +S+FSAT+P VEE
Sbjct: 266 VKNEALDLSNVKHLIFDEADKLFD-KTFIEQTDDILNSCTDPSMRKSMFSATIPSSVEET 324
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A SIM+D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ + PP++IF++S
Sbjct: 325 ANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQQGEFKPPIIIFLESI 384
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QRE ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 385 ARAKALYHELMYDRINVDVIHAERTAIQREKIIERFKTGELWCLICTDVLARGIDFKGVN 444
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 445 LVINYDVPTTAQAYVH 460
>sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=ROK1 PE=3 SV=1
Length = 570
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 173/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +R+ +S DI++STPLRL
Sbjct: 213 LANQIFLECIKLSNRIFLDKKRPLQVALLSKSLSAKLRNKVISDKKYDIIVSTPLRLIDV 272
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ +CS+ S+ +S+FSAT+P VEE+
Sbjct: 273 VKNEALDLSQVKHLIFDEADKLFD-KTFVEQSDDILSSCSHSSLRKSMFSATIPSNVEEI 331
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAE-SLNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ SI+QKLVF G+EEGKL+A++Q E PPV+IF++S
Sbjct: 332 AKSIMMDPVRVIIGHKEAANTSIEQKLVFCGNEEGKLIAIKQLVQEGEFKPPVIIFLESI 391
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY E+ +D + VIH++ +Q QR ++ F++G W LI TDV+ARG+DFKGVN
Sbjct: 392 TRAKALYHEMMYDSLNVDVIHAERTQVQRNKIIERFKSGDLWCLITTDVLARGVDFKGVN 451
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P + AY+H
Sbjct: 452 LVINYDVPRTAQAYVH 467
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 233 bits (594), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 172/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL ++++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 367 LNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus GN=DDX52
PE=2 SV=1
Length = 596
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/255 (48%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE KL++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 244 LASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 303
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ R
Sbjct: 304 GIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCR 363
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V VG +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 364 LNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 423
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH+D +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 424 KELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 483
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 484 NYDFPTSSVEYIHRI 498
>sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHR1 PE=3 SV=1
Length = 578
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 168/253 (66%), Gaps = 6/253 (2%)
Query: 1 LATQTTRECKKLAKGNK-FQIKLMKKELVRSTD---LSKFSCDILISTPLRLRLAIRRKK 56
LA Q +E + + +G K + ++ K+L + + DI++STPLRL +++
Sbjct: 215 LAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGN 274
Query: 57 IDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIM 116
+DLS++E L++DEADKLF+ G + D ++ C+N I +S+FSAT+P VEE+A SIM
Sbjct: 275 MDLSKIEQLIIDEADKLFDHG-FAEQTDEILTHCTNLKIRKSIFSATIPSSVEEMAHSIM 333
Query: 117 HDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKE 175
D +R+I+G K AS +I QKLVF G+E+GKLLA+RQ + PP++IF+QS RAK
Sbjct: 334 KDPLRIIIGHKEAASNTIDQKLVFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAKA 393
Query: 176 LYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
L+ EL +D + VIH++ + QRE + F+ G WVLI TDV+ARG+DFKGVN VINY
Sbjct: 394 LFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINY 453
Query: 236 DFPDSGAAYIHRI 248
D P S AY+HRI
Sbjct: 454 DVPQSAQAYVHRI 466
>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus GN=Ddx52
PE=2 SV=2
Length = 598
Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 171/255 (67%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K + + S DIL++TP RL +++
Sbjct: 247 LASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 306
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + + AC++P + R++FSAT VE+ +
Sbjct: 307 GIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCK 366
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + V V +G +N+A E+++Q+L+F GSE GKLLA+R+ + PPVL+FVQS ERA
Sbjct: 367 LNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFKPPVLVFVQSIERA 426
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 427 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 486
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 487 NYDFPTSSVEYIHRI 501
>sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ROK1 PE=3 SV=1
Length = 564
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROK1 PE=1 SV=1
Length = 564
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 172/256 (67%), Gaps = 11/256 (4%)
Query: 1 LATQTTRECKKLA------KGNKFQIKLMKKEL---VRSTDLSKFSCDILISTPLRLRLA 51
LA Q EC KL+ K Q+ L+ K L +++ +S DI+ISTPLRL
Sbjct: 204 LANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDV 263
Query: 52 IRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEEL 111
++ + +DLS+V++L+ DEADKLF+ ++ D ++ AC PS+ +++FSAT+P VEE+
Sbjct: 264 VKNEALDLSKVKHLIFDEADKLFD-KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEI 322
Query: 112 ARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSK 170
A+SIM D VRVI+G K A+ +I+QKL+F G+EEGKL+A+RQ E PP++IF++S
Sbjct: 323 AQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESI 382
Query: 171 ERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVN 230
RAK LY EL +D I VIH++ + QR+ ++ F+ G+ W LI TDV+ARG+DFKGVN
Sbjct: 383 TRAKALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVN 442
Query: 231 CVINYDFPDSGAAYIH 246
VINYD P S AY+H
Sbjct: 443 LVINYDVPGSSQAYVH 458
>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens GN=DDX52
PE=1 SV=3
Length = 599
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 170/255 (66%), Gaps = 7/255 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKFSC---DILISTPLRLRLAIRRKK- 56
LA+Q RE K+++G F+I ++ K V + S DIL++TP RL +++
Sbjct: 246 LASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305
Query: 57 -IDLSRVEYLVLDEADKLFEVG--NLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELAR 113
IDL+ VE+LV+DE+DKLFE G + + AC++ + R++FSAT VE+ +
Sbjct: 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCK 365
Query: 114 SIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERA 173
+ + + V +G +N+A E+++Q+L+F GSE GKLLA+R+ + NPPVL+FVQS ERA
Sbjct: 366 LNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERA 425
Query: 174 KELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVI 233
KEL+ EL ++GI VIH++ +Q QR+N V FRAGK WVLI T ++ARG+DFKGVN VI
Sbjct: 426 KELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVI 485
Query: 234 NYDFPDSGAAYIHRI 248
NYDFP S YIHRI
Sbjct: 486 NYDFPTSSVEYIHRI 500
>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=ROK1 PE=3 SV=1
Length = 579
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 171/260 (65%), Gaps = 19/260 (7%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTD-------------LSKFSCDILISTPLR 47
LA Q EC KLA +I L KK ++ +S+ DI+ISTPLR
Sbjct: 215 LANQIFIECSKLAN----KIYLDKKRPLQVALLSKSLSSKLKNKVISEDKYDIIISTPLR 270
Query: 48 LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDF 107
L ++ + ++L +V++L+ DEADKLF+ ++ D ++ +C++P + +++FSAT+P
Sbjct: 271 LITVVQEEALNLGKVKHLIFDEADKLFD-KTFVEQTDDILSSCTDPHLRKTMFSATIPSN 329
Query: 108 VEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIF 166
VEE+A++IM+D +RVI+G K A+ +I Q+LVF G+EEGKL+A+RQ E PPV+IF
Sbjct: 330 VEEIAQTIMNDPIRVIIGHKEAANINIDQQLVFCGNEEGKLIAIRQLVLEGEFKPPVIIF 389
Query: 167 VQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDF 226
++S RAK L+ EL +D + VIH++ +Q QR+ ++ F++G W LI TDV+ARG+DF
Sbjct: 390 LESITRAKALFHELLYDKLNVDVIHAERTQVQRDKIIERFKSGDLWCLICTDVLARGVDF 449
Query: 227 KGVNCVINYDFPDSGAAYIH 246
KGVN VINYD P S AY+H
Sbjct: 450 KGVNLVINYDVPRSAQAYVH 469
>sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ROK1 PE=3 SV=1
Length = 547
Score = 218 bits (556), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 156/223 (69%), Gaps = 4/223 (1%)
Query: 28 VRSTDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
+R+ +S DI I+TPLRL A+ +DL ++ ++ DEADKLFE G +D ++
Sbjct: 232 LRNGKVSSQKYDICITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKG-FATQVDDIL 290
Query: 88 KACSNPSIVRSLFSATLPDFVEELARSIMH-DAVRVIVGRKNTASESIKQKLVFAGSEEG 146
AC + I ++LFSAT+P VE+LA SIM D +R+I+G K A+++++QKLV+AG+EEG
Sbjct: 291 AACPS-GIQKTLFSATIPASVEQLANSIMSTDPLRIIIGNKQAAAQTVEQKLVYAGNEEG 349
Query: 147 KLLALRQSFAES-LNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDD 205
KL+A+RQ E L PV+IF+QS +RAK L+ EL FDGI IH D++ +R + +D
Sbjct: 350 KLVAIRQMAREGQLVAPVIIFLQSIDRAKALFKELVFDGINVDQIHGDMTAAKRASVIDR 409
Query: 206 FRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
FR G+ WVLI TDV+ARG+DF+G+N VINYD P S +Y+HRI
Sbjct: 410 FRNGEVWVLICTDVLARGIDFRGINLVINYDVPQSAQSYVHRI 452
>sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rok1 PE=3 SV=1
Length = 481
Score = 218 bits (556), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/252 (46%), Positives = 165/252 (65%), Gaps = 6/252 (2%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK---ELVRSTDLSKFSCDILISTPLRLRLAIRRKKI 57
L Q R+ +KL+ G +I + K ++ + D+ I TP+RL AI+ +
Sbjct: 127 LCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQ-TGL 185
Query: 58 DLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMH 117
+VE+ V+DEAD+LFE G ++ D ++ AC++ +I +SLFSAT+P VEELA+ +
Sbjct: 186 SFEKVEFFVMDEADRLFEPG-FIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTV 244
Query: 118 DAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQSFAES-LNPPVLIFVQSKERAKEL 176
D +R+IVG K+ A++SI Q+L+F GS+ K++ LRQ + L P V+IFVQ ERAK L
Sbjct: 245 DPIRIIVGLKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKAL 304
Query: 177 YGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
Y EL FD I GVIH +L Q +RE A+ FR G+ WVLIATD++ARG+DF GV VIN+D
Sbjct: 305 YTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFD 364
Query: 237 FPDSGAAYIHRI 248
FP S +YIHRI
Sbjct: 365 FPQSVHSYIHRI 376
>sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ROK1 PE=3 SV=1
Length = 620
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS +RA+ELY L DGI+ +H ++T+R+ A+ DFR
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFR 469
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 470 VGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510
>sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ROK1 PE=3 SV=1
Length = 620
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 30 STDLSKFSCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKA 89
S + D+L++TP RL I ++I L+R +Y++LDE+D+L + L ++P++ A
Sbjct: 291 SGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLS-SDFLPQVEPILSA 349
Query: 90 CSNPSIVRSLFSATLPDFVEELARSIMHDAVRVIVGR-KNTASESIKQKLVFAGSEEGKL 148
CSNP++ + SAT+P E LA+ + D +V K++A ++ Q L++ GSE GKL
Sbjct: 350 CSNPAVQKCFLSATMPAGAESLAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKL 409
Query: 149 LALRQSFAESLNP-PVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFR 207
LALR + P P LIFVQS +RA+ELY L DGI+ +H ++T+R+ A+ DFR
Sbjct: 410 LALRNLISSGQLPYPSLIFVQSIDRAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIKDFR 469
Query: 208 AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
G W+L+ T+V+ARGMDF+GV VINYDFP + +YIHRI
Sbjct: 470 VGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510
>sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rok1
PE=3 SV=1
Length = 742
Score = 171 bits (432), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 166/311 (53%), Gaps = 64/311 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTD-- 32
LA+Q E +KLA G ++ LMKK + R+ +
Sbjct: 290 LASQIVNEGRKLALGTGVKVTLMKKGMRVVERENEDEDVLDESNSESSESESDERTPNNK 349
Query: 33 ----LSKFSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
+ DIL+STPL+L A+ K L V LVLDEAD L + + +D
Sbjct: 350 NKGPVPITKSDILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLD 409
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTASE 132
+ ++C++P + SL+SAT+ +E++A++ + + +R++VG K++A
Sbjct: 410 -IWRSCTHPELRASLWSATMGSSIEDMAKTTIKERKLSLPQTKSYPLLRLVVGLKDSAIP 468
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD- 183
+IK KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 469 NIKHKLVYAATEQGKLLGLRQLIHPTAATTSDVRLRPPFLIFTQTIPRAIALHSELLYDI 528
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HSDLS TQR + + FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 529 PPEAGGSARIAVLHSDLSDTQRSDIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 588
Query: 238 PDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 589 PNSPAVYVHRV 599
>sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rok1 PE=3 SV=1
Length = 725
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 64/311 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKEL--------------------------VRSTDLS 34
LA+Q E +KL G +I LMKK + ++T+
Sbjct: 278 LASQIVNEGRKLVSGTGVKITLMKKGMQVVEREDDDEDVLDEGSSESSESEDDEKTTEKK 337
Query: 35 K------FSCDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHID 84
DIL++TPL+L A+ K L V +VLDEAD L + + +D
Sbjct: 338 SKGKAPVTKSDILVTTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLD 397
Query: 85 PVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASE 132
+ +AC++P + SL+SAT+ +E+LA+S + + R++VG K++A
Sbjct: 398 -IWRACTHPELRASLWSATMGSSIEDLAKSTIKERKDASSLTKSYPLYRLVVGLKDSAIP 456
Query: 133 SIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD- 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 457 NIQHKLVYAATEQGKLLGLRQLLHPAAAAASDIRLRPPFLIFTQTIPRAVALHSELRYDI 516
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 517 PPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGIDFRGINGVVNYDI 576
Query: 238 PDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 577 PNSAAVYVHRV 587
>sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rok1
PE=3 SV=1
Length = 739
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 164/312 (52%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV------------RSTDLSKFS----------- 37
LA+Q E +KL G +I LMKK + S D + S
Sbjct: 292 LASQIVNEGRKLVHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSDSEQDEPSTTR 351
Query: 38 ----------CDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 83
DIL++TPL L L+ R K L V +VLDEAD L + + +
Sbjct: 352 KKKGKAPITKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQTL 411
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTAS 131
D + +AC++P + SL+SAT+ +E+LA+S + + +R++VG K++A
Sbjct: 412 D-IWRACTHPELRASLWSATMGSNIEDLAKSTIKERKQAYDQTKSYPLLRLVVGLKDSAI 470
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 PNIEHKLVYAATEQGKLLGLRQLLHPAAASVSDVRLRPPFLIFTQTIPRAIALHSELRYD 530
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 531 IPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYD 590
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 591 IPNSAAVYVHRV 602
>sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rok1 PE=3 SV=2
Length = 729
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 167/313 (53%), Gaps = 66/313 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKK----------------------ELVRSTDLSKFSC 38
LA+Q E +KLA G +I LMKK E + S D K +
Sbjct: 283 LASQIVNEGRKLALGTGVKITLMKKGMRVVERDDEDDSKDVLDEDDSESLGSEDDEKATA 342
Query: 39 ------------DILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKH 82
DIL++TPL L L+ R K L V +VLDEAD L + +
Sbjct: 343 KNSKGKAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQT 402
Query: 83 IDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTA 130
+D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K++A
Sbjct: 403 LD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIKERKDTLSETKSYPLLRLVVGLKDSA 461
Query: 131 SESIKQKLVFAGSEEGKLLALRQ----SFAES----LNPPVLIFVQSKERAKELYGELAF 182
+IK KLV+A +E+GKLL LRQ + A S L PP LIF Q+ RA L+ EL +
Sbjct: 462 IPNIKHKLVYAATEQGKLLGLRQLLHPAAASSTDIRLRPPFLIFTQTIPRAVALHSELRY 521
Query: 183 D-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINY 235
D R V+HS+LS QR + FR G+ W+L+ TD++ARG+DF+G+N V+NY
Sbjct: 522 DIPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWILVTTDLLARGVDFRGINGVVNY 581
Query: 236 DFPDSGAAYIHRI 248
D P+S A Y+HR+
Sbjct: 582 DIPNSAAVYVHRV 594
>sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rok1
PE=3 SV=1
Length = 738
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 163/312 (52%), Gaps = 65/312 (20%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVR---------------------------STDL 33
LA+Q E +KL G +I LMKK + ST
Sbjct: 291 LASQIVNEGRKLVHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSESEQDEPSTTR 350
Query: 34 SK------FSCDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNLLKHI 83
K DIL++TPL L L+ R K L V +VLDEAD L + + +
Sbjct: 351 KKKGKAPVTKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFRDQTL 410
Query: 84 DPVVKACSNPSIVRSLFSATLPDFVEELARSIM------------HDAVRVIVGRKNTAS 131
D + +AC++P + SL+SAT+ +E+LA+S + + +R++VG K++A
Sbjct: 411 D-IWRACTHPELRASLWSATMGSNIEDLAKSTIKERKQAYDRTNSYPLLRLVVGLKDSAI 469
Query: 132 ESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD 183
+I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 470 PNIEHKLVYAATEQGKLLGLRQLLHPAAASASDVRLRPPFLIFTQTIPRAIALHSELRYD 529
Query: 184 -------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYD 236
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD
Sbjct: 530 IPAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYD 589
Query: 237 FPDSGAAYIHRI 248
P+S A Y+HR+
Sbjct: 590 IPNSAAVYVHRV 601
>sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioides immitis (strain RS)
GN=ROK1 PE=3 SV=1
Length = 730
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 146/259 (56%), Gaps = 48/259 (18%)
Query: 29 RSTDLSKFSCDILISTPLRLRLAI----RRKKIDLSRVEYLVLDEADKLFEVGNLLKHID 84
+S D+ DIL+ TPL L A+ +R L V+ LVLDEAD L +D
Sbjct: 346 KSKDIPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVL---------LD 396
Query: 85 P--------VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIV 124
P + +AC++P + L+SAT+ +EEL +S + + +R++V
Sbjct: 397 PLFREQTLSIWRACTHPQLRVGLWSATMGSNIEELTKSTIKERQELLGLKDESSLIRLVV 456
Query: 125 GRKNTASESIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKEL 176
G K+TA +I KLV+A +E+GKLL LRQ S L PP LIF Q+ RA L
Sbjct: 457 GLKDTAIPNISHKLVYAATEQGKLLGLRQLLHPTSTSSSTTHLRPPFLIFTQTIARAIAL 516
Query: 177 YGELAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGV 229
+ EL +D R V+HS+LS ++R + + FR G+ WVLI TD++ARG+DF+G+
Sbjct: 517 HSELMYDIPAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGI 576
Query: 230 NCVINYDFPDSGAAYIHRI 248
N V+NYD P+S A+Y+HR+
Sbjct: 577 NGVVNYDIPNSSASYVHRV 595
>sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rok1 PE=3 SV=1
Length = 738
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 143/250 (57%), Gaps = 48/250 (19%)
Query: 38 CDILISTPLRLRLAIRRKKID----LSRVEYLVLDEADKLFEVGNLLKHIDP-------- 85
DIL++TPL+L A+ + L V +VLDEAD L +DP
Sbjct: 360 SDILVTTPLQLVNALSTNQTKPMATLPLVRNIVLDEADVL---------LDPLFRDQTLN 410
Query: 86 VVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRKNTASES 133
+ +AC++P + SL+SAT+ VE+LA+S + + +R++VG K++A +
Sbjct: 411 IWRACTHPELRASLWSATMGSNVEDLAKSTIKERKEAVNQTKSYPLLRLVVGLKDSAIPN 470
Query: 134 IKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGELAFD-- 183
I+ KL++A +E+GKLL LRQ + L PP LIF Q+ RA L+ EL +D
Sbjct: 471 IEHKLIYAATEQGKLLGLRQLLHPTAASASDVRLRPPFLIFTQTIPRAVALHSELRYDIP 530
Query: 184 -----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFP 238
R V+HSDLS QR + +FR G+ W+L+ TD++ARG+DF+G+N V+NYD P
Sbjct: 531 TEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDIP 590
Query: 239 DSGAAYIHRI 248
+S A Y+HR+
Sbjct: 591 NSAAVYVHRV 600
>sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rok1 PE=3 SV=2
Length = 749
Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 165/316 (52%), Gaps = 69/316 (21%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELV-------------------------------R 29
LA+Q E +KL +G +I LMKK + +
Sbjct: 296 LASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQ 355
Query: 30 STDLSK------FSCDILISTPLRL--RLAIRRKK--IDLSRVEYLVLDEADKLFEVGNL 79
+TD DIL++TPL L L+ R K L V +VLDEAD L +
Sbjct: 356 TTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFR 415
Query: 80 LKHIDPVVKACSNPSIVRSLFSATLPDFVEELARSIMHDA------------VRVIVGRK 127
+ +D + ++C++P + SL+SAT+ VE+LA+S + + +R++VG K
Sbjct: 416 EQTLD-IWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLK 474
Query: 128 NTASESIKQKLVFAGSEEGKLLALRQSFAES--------LNPPVLIFVQSKERAKELYGE 179
++A +I+ KLV+A +E+GKLL LRQ + L PP LIF Q+ RA L+ E
Sbjct: 475 DSAIPNIQHKLVYAATEQGKLLGLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSE 534
Query: 180 LAFD-------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
L +D R V+HS+LS +QR + FR G+ W+L+ TD++ARG+DF+G+N V
Sbjct: 535 LLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGV 594
Query: 233 INYDFPDSGAAYIHRI 248
+NYD P+S A Y+HR+
Sbjct: 595 VNYDIPNSAAVYVHRV 610
>sp|A4RMV8|ROK1_MAGO7 ATP-dependent RNA helicase ROK1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=ROK1 PE=3 SV=1
Length = 775
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 134/248 (54%), Gaps = 40/248 (16%)
Query: 38 CDILISTPLRL----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLK-HIDPVVKACSN 92
DIL++TP+ L K L RV L+LDEAD L + L + + AC N
Sbjct: 398 ADILVTTPMLLLNFLSKGTSTTKKRLPRVRSLILDEADVLLD--QLFREQTMGIWSACRN 455
Query: 93 PSIVRSLFSATLPDFVE----ELARSIMHDA-----VRVIVGRKNTASESIKQKLVFAGS 143
P++ S +SAT+ +E + R+ DA +R++VG K+TA +I +LV+ +
Sbjct: 456 PNLRVSFWSATMASNIETHILDNLRAQADDAPAPPLIRLVVGLKDTAVPNISHRLVYTAT 515
Query: 144 EEGKLLALRQ-----SFAE------------SLNPPVLIFVQSKERAKELYGELAFD--- 183
E GKLLALRQ SF+ L PP L+FVQ+ ERA L+ EL +D
Sbjct: 516 ESGKLLALRQLLHPASFSTTTSSTTTPEDETPLRPPFLVFVQTIERATALHEELKYDIPA 575
Query: 184 ----GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPD 239
R V+HS + ++ R + FRA WVLI TDV+ARG+DF GVN V+NYD P
Sbjct: 576 AAGGASRVAVLHSSMPESARAAVIRRFRAADVWVLITTDVLARGVDFAGVNGVVNYDVPG 635
Query: 240 SGAAYIHR 247
S AAY+HR
Sbjct: 636 SAAAYVHR 643
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ LS V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 278 GCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPPTG 336
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR +HD + + VGR + SE+I Q++++ + + K AL
Sbjct: 337 ERQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYVENRD-KNSALLD 395
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
A S + LIFV++K A +L L A IH D SQ +RE A+ FR+G+ +
Sbjct: 396 LLAASNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANI 455
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 456 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 490
>sp|Q7SFC8|ROK1_NEUCR ATP-dependent RNA helicase rok-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rok-1 PE=3 SV=1
Length = 781
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 134/247 (54%), Gaps = 38/247 (15%)
Query: 38 CDILISTPLRL----------RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVV 87
DIL++TP L + R K L V+ L+LDEAD L + K +
Sbjct: 394 VDILVTTPKILLNFLCGGEKEKGKPRIIKKTLPTVQSLILDEADVLLDP-IFRKQTMGIW 452
Query: 88 KACSNPSIVRSLFSATLPDFVEEL------------ARSIMHDAVRVIVGRKNTASESIK 135
+AC++P++ + +SAT+ +E L +R++VG K+TA +I
Sbjct: 453 RACTHPNLGMTCWSATMASNIEALLTKHIDKRAKRTPEQTPKPLIRLVVGLKDTAVPNIT 512
Query: 136 QKLVFAGSEEGKLLALRQ-----SFAES---LNPPVLIFVQSKERAKELYGELAFD---- 183
KL++ +E GKLLALRQ S A+S L PP L+F Q+ ERA+ L+ EL +D
Sbjct: 513 HKLIYTATEPGKLLALRQLLHPVSSADSGPPLRPPFLVFTQTIERAQALHDELKYDIPLE 572
Query: 184 ---GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDS 240
R V+HS L + R + FR+G+ WVLI TDV+ARG+DF GVN V+NYD P S
Sbjct: 573 AGGSARVAVLHSSLPDSVRSKIMARFRSGEVWVLITTDVLARGVDFAGVNGVVNYDVPVS 632
Query: 241 GAAYIHR 247
AAY+HR
Sbjct: 633 AAAYVHR 639
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACS-NPSI 95
CD+L++TP RL + R KI L+ V+YLVLDEAD++ ++G I +V+ C P
Sbjct: 275 GCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMTPVG 333
Query: 96 VRS--LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
R +FSAT P ++ LAR + D + + VGR + SE+I QK+++ +++ K LL L
Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDL 393
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L RA IH D +Q++RE A+ FR+G
Sbjct: 394 LSASTDGL---TLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRI 487
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 33/266 (12%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRST-------------DLSKFSCDILISTPLR 47
LATQ E KK + VR T DLS+ CD+L++TP R
Sbjct: 255 LATQIYDEAKKFTY----------RSWVRPTVVYGGSDIGSQIRDLSR-GCDLLVATPGR 303
Query: 48 LRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATL 104
L + R ++ L+ V+YLVLDEAD++ ++G I +V C P + +FSAT
Sbjct: 304 LSDLLERGRVSLANVKYLVLDEADRMLDMG-FEPQIRQIVDGCDMPPVGERQTLMFSATF 362
Query: 105 PDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLALRQSFAESLNPP 162
PD ++ LAR + D + + VG+ + SE+I Q++++ + K LL L + + L
Sbjct: 363 PDDIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVEDMDKKSTLLDLLSASNDGL--- 419
Query: 163 VLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIAR 222
LIFV++K A EL L RA IH D +Q++RE A+ F+ G +L+AT V AR
Sbjct: 420 TLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSERERALAAFKNGNANLLVATAVAAR 479
Query: 223 GMDFKGVNCVINYDFPDSGAAYIHRI 248
G+D V V+NYD P Y+HRI
Sbjct: 480 GLDIPNVTHVVNYDLPSDIDDYVHRI 505
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 308 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQ 366
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K +L L
Sbjct: 367 DRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDL 426
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ +E L ++F ++K A L L G A IH D SQ +RE A+ F++G+
Sbjct: 427 LNANSEGL---TIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGQA 483
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 484 PILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 520
>sp|Q4IPI1|ROK1_GIBZE ATP-dependent RNA helicase ROK1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ROK1 PE=3
SV=1
Length = 693
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 133/250 (53%), Gaps = 49/250 (19%)
Query: 37 SCDILISTPLRL-----RLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVK--- 88
+ DIL++TP L +K+ L V L+LDEAD L +DP+ +
Sbjct: 327 TPDILVTTPFLLFKFLTSGPPSTQKV-LPTVRDLILDEADVL---------LDPLFRDAT 376
Query: 89 -----ACSNPSIVRSLFSATLPDFVEEL------ARSIMHDA-----VRVIVGRKNTASE 132
AC+N ++ S +SAT+ +E + +R+ D VR++VG K+TA
Sbjct: 377 MADWTACTNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITPKPFVRLVVGLKDTAVP 436
Query: 133 SIKQKLVFAGSEEGKLLALRQ--------SFAESLNPPVLIFVQSKERAKELYGELAFD- 183
+I KL++ SE+GKLLALRQ L PP L+F Q+ +RA L+ EL +D
Sbjct: 437 NIAHKLIYTASEQGKLLALRQLLHPTASDDSGPPLRPPFLVFTQTIDRATALHEELQYDI 496
Query: 184 ------GIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDF 237
R +HS L+ + R + + FRAG W+LI TDV+ARG+DF GVN V+NYD
Sbjct: 497 PLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLARGVDFAGVNGVVNYDV 556
Query: 238 PDSGAAYIHR 247
P S A Y+HR
Sbjct: 557 PGSSAGYVHR 566
>sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DED1 PE=3 SV=1
Length = 627
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 139/261 (53%), Gaps = 23/261 (8%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLS--------KFSCDILISTPLRLRLAI 52
LATQ E KK F + K +V S ++ C++L++TP RL +
Sbjct: 254 LATQIYDEAKK------FTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLL 307
Query: 53 RRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVRS---LFSATLPDFVE 109
R+ I L+ V+YLVLDEAD++ ++G I +V+ PS+ +FSAT P ++
Sbjct: 308 ERRYISLANVKYLVLDEADRMLDMG-FEPQIRRIVEGSDMPSVDNRQTLMFSATFPSEIQ 366
Query: 110 ELARSIMHDAVRVIVGRKNTASESIKQKLVFAGS--EEGKLLALRQSFAESLNPPVLIFV 167
LA + D V + VGR + SE+I QK+++ + LL L + E L LIFV
Sbjct: 367 HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGL---TLIFV 423
Query: 168 QSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFK 227
++K A L L +G +A IH D +Q +RE A+ F+ G+ +L+AT V ARG+D
Sbjct: 424 ETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIP 483
Query: 228 GVNCVINYDFPDSGAAYIHRI 248
V VIN+D P+ Y+HRI
Sbjct: 484 NVTHVINFDLPNDIDDYVHRI 504
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 140 bits (354), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 301 GCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPDVQ 359
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ EE K LL L
Sbjct: 360 DRQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDL 419
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 420 LSAGDAGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGAA 476
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 477 PILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRI 513
>sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP1 PE=3 SV=1
Length = 604
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
C++L++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 271 GCNLLVATPGRLNDLLERGKISLVNVKYLVLDEADRMLDMG-FEPQIRHIVEDCDMPSVN 329
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D + + VGR + SE+I+QK++F + K AL
Sbjct: 330 DRQTLMFSATFPREIQHLARDFLKDYIFLSVGRVGSTSENIQQKVLFV-EDYDKNSALLD 388
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
++ L+FV++K A +L L +A IH D +Q +RE A+ FR G +
Sbjct: 389 ILINEIDGLTLVFVETKRMADQLTDFLIVQNFKATAIHGDRTQAERERALHAFRNGIANI 448
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 449 LVATAVAARGLDIPNVTNVINYDLPTDIDDYVHRI 483
>sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DED1 PE=3 SV=3
Length = 637
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ LS ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 302 GCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 360
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + D + + VGR + SE+I QK+++ +E K LL L
Sbjct: 361 SRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDL 420
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F++G
Sbjct: 421 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGTA 477
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ V+NYD P Y+HRI
Sbjct: 478 PILVATAVAARGLDIPNVSHVVNYDLPGDIDDYVHRI 514
>sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DED1 PE=3 SV=1
Length = 672
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 5/215 (2%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R K+ L+ + YLVLDEAD++ ++G I +V+ C P++
Sbjct: 319 GCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMG-FEPQIRYIVEECDMPAVK 377
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++ LAR + D V + VGR + SE+I QK+++ +E K + L
Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVIL-D 436
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ + N ++F ++K A L L G A IH D SQ +RE A+ F+ G +
Sbjct: 437 LLSANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPI 496
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V+ VINYD P Y+HRI
Sbjct: 497 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRI 531
>sp|A4RHF1|DED1_MAGO7 ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2
Length = 671
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL I R +I L ++YLVLDEAD++ ++G I +V+ P++
Sbjct: 324 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMG-FEPQIRRIVEGEDMPNVQ 382
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQ 153
+FSAT P ++++LAR + D + + VGR + SE+I Q+++ + K+ L
Sbjct: 383 DRQTLMFSATFPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLD 442
Query: 154 SFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWV 213
+ LIFV++K A EL L + A IH D +Q +RE A++ FR G+ +
Sbjct: 443 LLSTHGGGLTLIFVETKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPI 502
Query: 214 LIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 503 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRI 537
>sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DED1 PE=3 SV=1
Length = 630
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL+ + R ++ L+ ++YLVLDEAD++ ++G I +V+ C P +
Sbjct: 289 GCDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMG-FEPQIRHIVQECDMPGVE 347
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I QK+++ EE K LL L
Sbjct: 348 DRQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDL 407
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ L +IF ++K A L L G A IH D SQ +RE A+ F+ G
Sbjct: 408 LSANDNGL---TIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKTGTA 464
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V+ ++NYD P Y+HRI
Sbjct: 465 PILVATAVAARGLDIPNVSHIVNYDLPSDIDDYVHRI 501
>sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP1 PE=1 SV=2
Length = 617
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP1 PE=3 SV=1
Length = 617
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 37 SCDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIV 96
CD+L++TP RL + R K+ L+ ++YLVLDEAD++ ++G I +V+ C PS+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMG-FEPQIRHIVEECDMPSVE 345
Query: 97 RS---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGK--LLAL 151
+FSAT P ++ LAR + + + + VGR + SE+I Q++++ + K LL L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDL 405
Query: 152 RQSFAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKT 211
+ + L LIFV++K A +L L +A IH D +Q +RE A+ F+A
Sbjct: 406 LSAEHKGL---TLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVA 462
Query: 212 WVLIATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+L+AT V ARG+D V VINYD P Y+HRI
Sbjct: 463 DILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 499
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K + ++ + + + +S + +ILI+TP RL + K +
Sbjct: 199 LAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTN 258
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P ++SAT P V++LAR
Sbjct: 259 LKRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDY 313
Query: 116 MHDAVRVIVGR-KNTASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
+HD ++V +G + AS +I Q ++V + +L+ + ++ + ++IF +K
Sbjct: 314 LHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIIIFASTKRT 373
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
E+ L DG A IH D Q +R+ +++FR G++ +++ATDV ARG+D KG+N V
Sbjct: 374 CDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINFV 433
Query: 233 INYDFPDSGAAYIHRI 248
INYD P + Y+HRI
Sbjct: 434 INYDMPGNIEDYVHRI 449
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 5/214 (2%)
Query: 38 CDILISTPLRLRLAIRRKKIDLSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSNPSIVR 97
CD++++TP RL + R KI L V+YLVLDEAD++ ++G I +V+ C P++
Sbjct: 279 CDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMG-FEPQIRHIVEGCDMPTVEN 337
Query: 98 S---LFSATLPDFVEELARSIMHDAVRVIVGRKNTASESIKQKLVFAGSEEGKLLALRQS 154
+FSAT P ++ LA + D + + VGR + SE+I QK++ + K L
Sbjct: 338 RQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHV-EDIDKRSVLLDL 396
Query: 155 FAESLNPPVLIFVQSKERAKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVL 214
A S L+FV++K A L L + A IH D +Q +RE A+ FR G+ VL
Sbjct: 397 LAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGRANVL 456
Query: 215 IATDVIARGMDFKGVNCVINYDFPDSGAAYIHRI 248
+AT V ARG+D V VINYD P Y+HRI
Sbjct: 457 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRI 490
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1 LATQTTRECKKLAKGNKFQIKLMKKELVRSTDLSKF--SCDILISTPLRLRLAIRRKKID 58
LA Q +EC K K ++ + + + R + +I I+TP RL + K +
Sbjct: 207 LAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTN 266
Query: 59 LSRVEYLVLDEADKLFEVGNLLKHIDPVVKACSN---PSIVRSLFSATLPDFVEELARSI 115
L RV YLVLDEAD++ ++G +P ++ + P +FSAT P V+ LAR
Sbjct: 267 LRRVTYLVLDEADRMLDMG-----FEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDY 321
Query: 116 MHDAVRVIVGRKN-TASESIKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKER 172
++D ++V VG + AS +IKQ ++V + +L + + + VLIF +K
Sbjct: 322 LNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRV 381
Query: 173 AKELYGELAFDGIRAGVIHSDLSQTQRENAVDDFRAGKTWVLIATDVIARGMDFKGVNCV 232
A ++ L DG A IH D +Q +R+ +++FR GK+ +++ATDV +RG+D KG+ V
Sbjct: 382 ADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHV 441
Query: 233 INYDFPDSGAAYIHRI 248
NYDFP + Y+HRI
Sbjct: 442 FNYDFPGNTEDYVHRI 457
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,599,797
Number of Sequences: 539616
Number of extensions: 3221341
Number of successful extensions: 13512
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 9594
Number of HSP's gapped (non-prelim): 2373
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)