Query 042005
Match_columns 432
No_of_seqs 225 out of 1428
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 13:00:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042005.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042005hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1.1E-99 2E-104 767.5 34.5 362 69-431 24-452 (454)
2 PLN02209 serine carboxypeptida 100.0 1.1E-87 2.4E-92 686.7 37.2 360 68-429 18-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 3.2E-87 7E-92 683.2 34.4 357 71-429 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 3.1E-87 6.7E-92 685.5 30.1 347 79-426 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.3E-81 2.9E-86 649.0 34.8 346 83-430 41-462 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.2E-59 2.7E-64 465.5 24.8 262 167-429 25-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.1E-55 2.5E-60 442.4 21.4 333 86-426 73-490 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.1E-55 8.9E-60 411.3 14.0 328 90-425 4-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 98.8 1.6E-06 3.5E-11 82.4 22.2 63 338-425 226-288 (288)
10 PRK00870 haloalkane dehalogena 98.7 6.4E-06 1.4E-10 80.8 23.3 69 338-428 234-302 (302)
11 TIGR03343 biphenyl_bphD 2-hydr 98.6 2.6E-05 5.6E-10 75.1 23.7 60 342-425 222-281 (282)
12 TIGR03611 RutD pyrimidine util 98.5 8.6E-06 1.9E-10 76.3 18.5 59 343-425 198-256 (257)
13 PHA02857 monoglyceride lipase; 98.4 7.2E-05 1.6E-09 72.1 23.1 63 342-427 208-273 (276)
14 TIGR02427 protocat_pcaD 3-oxoa 98.4 2.2E-05 4.8E-10 72.7 17.3 60 342-425 192-251 (251)
15 PLN02824 hydrolase, alpha/beta 98.3 5.6E-05 1.2E-09 73.7 19.8 60 343-426 234-293 (294)
16 PRK03204 haloalkane dehalogena 98.3 4.6E-05 1E-09 74.4 18.9 58 343-424 227-285 (286)
17 TIGR03056 bchO_mg_che_rel puta 98.3 5.2E-05 1.1E-09 72.4 19.0 59 343-425 220-278 (278)
18 PRK10673 acyl-CoA esterase; Pr 98.3 0.00015 3.2E-09 68.6 21.4 60 343-426 195-254 (255)
19 PLN02385 hydrolase; alpha/beta 98.2 0.00032 6.9E-09 70.4 23.0 63 343-427 279-345 (349)
20 COG1506 DAP2 Dipeptidyl aminop 98.2 1.8E-05 3.9E-10 85.8 14.6 233 94-424 368-613 (620)
21 PRK03592 haloalkane dehalogena 98.1 0.00019 4.1E-09 70.0 17.2 64 343-429 228-291 (295)
22 PLN02298 hydrolase, alpha/beta 98.1 0.00073 1.6E-08 67.1 21.1 63 343-427 251-317 (330)
23 PF12697 Abhydrolase_6: Alpha/ 98.0 7.2E-05 1.6E-09 67.9 12.5 53 342-418 175-227 (228)
24 PLN02652 hydrolase; alpha/beta 98.0 0.00037 8E-09 71.4 18.6 62 343-426 324-386 (395)
25 PLN02894 hydrolase, alpha/beta 98.0 0.0013 2.9E-08 67.5 22.3 59 343-425 325-383 (402)
26 PLN02679 hydrolase, alpha/beta 98.0 0.00067 1.4E-08 68.6 19.8 65 343-427 292-357 (360)
27 PRK11126 2-succinyl-6-hydroxy- 98.0 0.00022 4.7E-09 67.0 15.1 54 343-426 188-241 (242)
28 KOG4178 Soluble epoxide hydrol 98.0 0.00079 1.7E-08 65.9 18.5 264 88-426 21-319 (322)
29 TIGR02240 PHA_depoly_arom poly 97.9 0.00042 9.2E-09 66.9 16.5 60 343-427 207-266 (276)
30 PRK14875 acetoin dehydrogenase 97.9 0.00091 2E-08 67.1 19.3 59 341-426 312-370 (371)
31 TIGR03695 menH_SHCHC 2-succiny 97.9 0.0018 3.8E-08 59.6 18.8 59 342-425 193-251 (251)
32 PLN02578 hydrolase 97.8 0.0019 4E-08 65.1 19.8 59 343-426 296-354 (354)
33 PRK10749 lysophospholipase L2; 97.8 0.0048 1E-07 61.5 22.1 68 343-427 259-329 (330)
34 PLN03087 BODYGUARD 1 domain co 97.8 0.0038 8.3E-08 65.4 21.6 67 336-426 410-478 (481)
35 PLN03084 alpha/beta hydrolase 97.8 0.0017 3.6E-08 66.3 18.3 58 343-425 325-382 (383)
36 PLN02980 2-oxoglutarate decarb 97.5 0.0032 6.9E-08 75.4 17.8 74 341-428 1566-1640(1655)
37 TIGR01249 pro_imino_pep_1 prol 97.5 0.017 3.7E-07 56.7 20.0 43 343-409 248-290 (306)
38 PLN02511 hydrolase 97.4 0.0053 1.1E-07 62.8 16.1 59 343-425 298-363 (388)
39 PRK10985 putative hydrolase; P 97.3 0.017 3.7E-07 57.4 18.3 46 343-412 255-300 (324)
40 PF00326 Peptidase_S9: Prolyl 97.3 0.0049 1.1E-07 57.1 13.6 164 170-424 42-206 (213)
41 TIGR03100 hydr1_PEP hydrolase, 97.3 0.074 1.6E-06 51.5 22.2 73 336-425 200-273 (274)
42 TIGR01607 PST-A Plasmodium sub 97.3 0.0061 1.3E-07 60.9 15.0 62 343-426 270-332 (332)
43 PLN02442 S-formylglutathione h 97.3 0.018 3.9E-07 56.2 17.9 128 101-241 29-181 (283)
44 PRK10566 esterase; Provisional 97.2 0.023 4.9E-07 53.7 17.2 62 343-426 186-247 (249)
45 KOG4409 Predicted hydrolase/ac 97.2 0.013 2.9E-07 57.9 15.5 214 168-426 138-363 (365)
46 PF10340 DUF2424: Protein of u 97.0 0.00062 1.4E-08 68.4 4.1 118 103-242 105-239 (374)
47 PRK05077 frsA fermentation/res 96.9 0.21 4.5E-06 51.6 22.0 58 343-427 355-412 (414)
48 PRK10115 protease 2; Provision 96.9 0.038 8.3E-07 60.7 17.2 137 94-243 419-564 (686)
49 PRK11460 putative hydrolase; P 96.8 0.066 1.4E-06 50.6 16.1 62 343-424 148-209 (232)
50 TIGR01738 bioH putative pimelo 96.7 0.0036 7.9E-08 57.6 6.8 59 342-424 187-245 (245)
51 PRK10349 carboxylesterase BioH 96.7 0.0049 1.1E-07 58.5 7.2 60 342-425 195-254 (256)
52 COG2267 PldB Lysophospholipase 96.5 0.12 2.6E-06 50.9 15.8 268 91-427 11-294 (298)
53 TIGR01840 esterase_phb esteras 96.4 0.044 9.5E-07 50.9 11.8 111 115-237 10-129 (212)
54 PRK08775 homoserine O-acetyltr 96.3 0.0054 1.2E-07 61.4 5.4 61 343-426 277-338 (343)
55 PRK07581 hypothetical protein; 96.2 0.01 2.2E-07 59.1 6.9 59 343-425 275-334 (339)
56 COG3509 LpqC Poly(3-hydroxybut 96.1 1 2.2E-05 44.0 19.3 121 101-238 44-179 (312)
57 PLN02965 Probable pheophorbida 96.0 0.015 3.3E-07 55.4 6.5 61 342-426 192-252 (255)
58 KOG1454 Predicted hydrolase/ac 95.9 0.017 3.8E-07 57.6 6.5 61 343-427 264-324 (326)
59 TIGR02821 fghA_ester_D S-formy 95.7 0.16 3.5E-06 49.2 12.2 127 102-240 25-175 (275)
60 PF08386 Abhydrolase_4: TAP-li 95.6 0.049 1.1E-06 44.8 7.0 65 343-431 34-98 (103)
61 PRK00175 metX homoserine O-ace 95.1 0.038 8.2E-07 56.2 6.0 64 343-426 309-373 (379)
62 PRK06765 homoserine O-acetyltr 95.0 0.069 1.5E-06 54.6 7.6 66 342-427 322-388 (389)
63 KOG2382 Predicted alpha/beta h 94.8 0.66 1.4E-05 45.7 13.4 61 342-426 252-312 (315)
64 KOG2564 Predicted acetyltransf 94.8 0.21 4.6E-06 48.2 9.6 104 116-237 72-181 (343)
65 TIGR01392 homoserO_Ac_trn homo 94.8 0.044 9.5E-07 55.0 5.4 62 343-425 288-351 (351)
66 PRK06489 hypothetical protein; 94.8 0.086 1.9E-06 53.1 7.5 60 343-427 292-357 (360)
67 TIGR01838 PHA_synth_I poly(R)- 93.4 3 6.5E-05 44.5 16.0 49 343-415 415-463 (532)
68 PF00561 Abhydrolase_1: alpha/ 92.3 0.31 6.8E-06 44.4 6.1 56 342-421 174-229 (230)
69 PLN00021 chlorophyllase 92.0 1.1 2.4E-05 44.5 9.8 119 107-240 43-168 (313)
70 KOG1515 Arylacetamide deacetyl 91.6 4.1 8.8E-05 40.8 13.4 137 91-243 63-212 (336)
71 PRK10162 acetyl esterase; Prov 91.0 0.44 9.6E-06 47.2 5.9 110 117-240 80-197 (318)
72 PLN02211 methyl indole-3-aceta 90.8 2.6 5.6E-05 40.7 11.0 60 343-427 211-270 (273)
73 KOG1455 Lysophospholipase [Lip 90.0 4.3 9.4E-05 39.8 11.4 122 100-238 36-164 (313)
74 PRK05855 short chain dehydroge 89.6 0.39 8.4E-06 51.1 4.4 59 343-426 233-291 (582)
75 KOG2100 Dipeptidyl aminopeptid 89.2 1.9 4.2E-05 48.0 9.6 224 101-425 507-745 (755)
76 TIGR03101 hydr2_PEP hydrolase, 88.7 3.6 7.9E-05 39.8 10.1 123 101-245 9-141 (266)
77 PLN02211 methyl indole-3-aceta 88.6 1.1 2.5E-05 43.2 6.6 103 116-238 16-122 (273)
78 PF10230 DUF2305: Uncharacteri 87.6 5.7 0.00012 38.3 10.7 115 118-241 2-125 (266)
79 PLN02872 triacylglycerol lipas 87.1 1.4 3E-05 45.2 6.4 61 343-426 325-388 (395)
80 PF12695 Abhydrolase_5: Alpha/ 86.9 1.2 2.6E-05 37.7 5.0 43 342-407 103-145 (145)
81 TIGR00976 /NonD putative hydro 86.8 7.1 0.00015 41.8 11.9 124 100-241 5-135 (550)
82 PF03583 LIP: Secretory lipase 86.7 1.6 3.4E-05 42.8 6.3 68 343-431 219-289 (290)
83 COG0596 MhpC Predicted hydrola 86.1 2.2 4.8E-05 38.3 6.7 61 341-424 219-279 (282)
84 cd00312 Esterase_lipase Estera 84.8 4.9 0.00011 42.1 9.4 88 115-205 92-188 (493)
85 PF07519 Tannase: Tannase and 84.7 2.2 4.8E-05 44.9 6.6 85 333-430 343-430 (474)
86 PF02230 Abhydrolase_2: Phosph 84.7 1 2.2E-05 41.8 3.7 59 343-425 155-213 (216)
87 PRK08775 homoserine O-acetyltr 84.6 5 0.00011 40.0 8.9 54 170-239 121-174 (343)
88 PRK05371 x-prolyl-dipeptidyl a 84.3 10 0.00022 42.4 11.9 29 342-370 454-482 (767)
89 PF02230 Abhydrolase_2: Phosph 84.3 6 0.00013 36.6 8.7 117 115-242 11-144 (216)
90 PRK10349 carboxylesterase BioH 84.2 4.9 0.00011 37.8 8.3 36 192-237 73-108 (256)
91 PF10503 Esterase_phd: Esteras 84.1 13 0.00028 34.9 10.8 110 116-238 14-132 (220)
92 KOG1838 Alpha/beta hydrolase [ 83.6 4.6 9.9E-05 41.3 8.0 126 91-238 95-236 (409)
93 TIGR01836 PHA_synth_III_C poly 83.4 2.4 5.1E-05 42.5 6.0 61 343-426 286-349 (350)
94 KOG3975 Uncharacterized conser 83.1 10 0.00022 36.3 9.5 102 116-233 27-142 (301)
95 COG3208 GrsT Predicted thioest 83.0 22 0.00048 33.8 11.8 59 343-425 176-234 (244)
96 PF01764 Lipase_3: Lipase (cla 83.0 2.2 4.8E-05 36.2 4.9 63 171-239 45-107 (140)
97 PF00561 Abhydrolase_1: alpha/ 81.8 3.6 7.7E-05 37.3 6.1 57 168-237 22-78 (230)
98 PF07859 Abhydrolase_3: alpha/ 81.1 2.1 4.6E-05 39.0 4.3 63 171-240 47-112 (211)
99 PF00975 Thioesterase: Thioest 81.0 1.7 3.8E-05 40.1 3.7 97 120-237 2-103 (229)
100 COG0400 Predicted esterase [Ge 80.4 2.4 5.1E-05 39.5 4.3 59 343-426 146-204 (207)
101 PF12695 Abhydrolase_5: Alpha/ 80.3 5.5 0.00012 33.4 6.4 90 120-237 1-94 (145)
102 PLN02454 triacylglycerol lipas 80.3 3.8 8.2E-05 42.1 6.0 68 170-240 206-273 (414)
103 PRK13604 luxD acyl transferase 78.0 4.3 9.4E-05 40.1 5.5 46 343-410 202-247 (307)
104 PF05448 AXE1: Acetyl xylan es 77.7 62 0.0014 32.2 13.8 128 101-240 66-211 (320)
105 PLN02965 Probable pheophorbida 75.9 5.4 0.00012 37.6 5.5 52 170-237 55-106 (255)
106 PF11288 DUF3089: Protein of u 75.9 4.9 0.00011 37.4 4.9 41 172-218 76-116 (207)
107 cd00741 Lipase Lipase. Lipase 75.0 7.1 0.00015 33.9 5.6 60 172-239 10-69 (153)
108 cd00707 Pancreat_lipase_like P 74.8 4 8.6E-05 39.6 4.3 103 116-237 34-146 (275)
109 PF05728 UPF0227: Uncharacteri 73.3 5.3 0.00011 36.5 4.5 52 177-244 46-97 (187)
110 COG0596 MhpC Predicted hydrola 72.6 37 0.0008 30.1 10.1 103 118-239 21-124 (282)
111 cd00519 Lipase_3 Lipase (class 72.3 8 0.00017 36.1 5.7 59 174-240 112-170 (229)
112 PF11144 DUF2920: Protein of u 71.6 9.4 0.0002 39.0 6.2 61 171-241 161-222 (403)
113 PRK00175 metX homoserine O-ace 71.2 28 0.00061 35.2 9.7 52 174-238 130-182 (379)
114 COG0657 Aes Esterase/lipase [L 70.2 63 0.0014 31.5 11.7 115 113-242 74-195 (312)
115 PF05577 Peptidase_S28: Serine 69.7 12 0.00026 38.6 6.8 70 168-247 88-157 (434)
116 TIGR01392 homoserO_Ac_trn homo 69.6 30 0.00066 34.4 9.5 52 174-238 110-162 (351)
117 COG4099 Predicted peptidase [G 69.3 62 0.0013 32.0 10.8 100 99-205 169-281 (387)
118 PLN02571 triacylglycerol lipas 67.5 13 0.00029 38.2 6.3 70 170-240 204-277 (413)
119 PLN02733 phosphatidylcholine-s 66.3 18 0.00039 37.7 7.2 70 133-217 113-182 (440)
120 PRK07581 hypothetical protein; 66.1 40 0.00086 33.2 9.4 36 193-238 123-159 (339)
121 KOG1552 Predicted alpha/beta h 65.9 11 0.00023 36.2 4.9 59 344-426 193-251 (258)
122 PRK10439 enterobactin/ferric e 65.1 1E+02 0.0022 31.8 12.4 107 115-238 206-323 (411)
123 TIGR01836 PHA_synth_III_C poly 63.8 47 0.001 33.1 9.5 52 176-240 122-173 (350)
124 PLN02872 triacylglycerol lipas 60.9 51 0.0011 33.8 9.2 81 116-205 72-172 (395)
125 PF05990 DUF900: Alpha/beta hy 60.0 11 0.00025 35.5 4.0 74 168-242 67-141 (233)
126 PRK11071 esterase YqiA; Provis 59.8 21 0.00045 32.5 5.6 54 343-425 136-189 (190)
127 PRK05855 short chain dehydroge 59.5 30 0.00065 36.6 7.6 90 101-205 12-106 (582)
128 COG0400 Predicted esterase [Ge 59.3 64 0.0014 30.0 8.8 75 171-256 78-155 (207)
129 PF06057 VirJ: Bacterial virul 58.8 16 0.00034 33.5 4.5 104 118-239 2-108 (192)
130 PLN02753 triacylglycerol lipas 58.5 23 0.0005 37.5 6.2 73 168-240 285-361 (531)
131 PLN02719 triacylglycerol lipas 58.1 23 0.00051 37.4 6.1 72 169-240 272-347 (518)
132 TIGR03230 lipo_lipase lipoprot 57.1 15 0.00033 38.2 4.7 58 169-237 96-153 (442)
133 COG1073 Hydrolases of the alph 55.4 26 0.00056 32.9 5.8 60 344-426 233-296 (299)
134 KOG2281 Dipeptidyl aminopeptid 54.7 39 0.00084 36.7 7.1 55 177-242 711-766 (867)
135 PF00681 Plectin: Plectin repe 54.0 12 0.00026 25.6 2.3 33 235-267 11-43 (45)
136 KOG2551 Phospholipase/carboxyh 53.9 37 0.00081 31.9 6.1 57 343-424 163-221 (230)
137 PRK06489 hypothetical protein; 53.7 83 0.0018 31.4 9.3 34 194-237 154-188 (360)
138 PRK06765 homoserine O-acetyltr 52.9 17 0.00037 37.2 4.2 77 138-237 118-195 (389)
139 TIGR01738 bioH putative pimelo 52.6 12 0.00025 33.9 2.7 35 193-237 65-99 (245)
140 PLN02408 phospholipase A1 51.2 34 0.00074 34.7 5.9 65 171-240 179-243 (365)
141 PF08840 BAAT_C: BAAT / Acyl-C 50.8 20 0.00043 33.3 4.0 47 180-237 9-55 (213)
142 PRK07868 acyl-CoA synthetase; 50.7 23 0.0005 40.9 5.3 59 343-425 297-359 (994)
143 COG0429 Predicted hydrolase of 50.5 31 0.00067 34.4 5.3 124 93-237 53-185 (345)
144 KOG3079 Uridylate kinase/adeny 50.2 9.2 0.0002 34.9 1.5 17 116-132 5-21 (195)
145 PRK04940 hypothetical protein; 50.2 21 0.00046 32.4 3.9 39 193-244 60-98 (180)
146 PF06821 Ser_hydrolase: Serine 49.8 27 0.00059 31.3 4.5 53 344-421 115-170 (171)
147 PF11187 DUF2974: Protein of u 49.7 32 0.0007 32.3 5.2 38 173-214 68-105 (224)
148 PF12740 Chlorophyllase2: Chlo 49.0 1.5E+02 0.0033 28.6 9.7 111 114-238 13-131 (259)
149 COG2819 Predicted hydrolase of 48.4 1.2E+02 0.0026 29.3 8.9 42 171-217 111-157 (264)
150 PF03959 FSH1: Serine hydrolas 48.0 18 0.00038 33.5 3.2 49 343-415 161-209 (212)
151 COG2272 PnbA Carboxylesterase 47.9 1E+02 0.0023 32.4 8.9 100 103-205 79-192 (491)
152 PLN02802 triacylglycerol lipas 47.2 40 0.00086 35.6 5.8 65 171-240 309-373 (509)
153 PF02450 LCAT: Lecithin:choles 45.7 35 0.00075 34.9 5.1 95 129-239 66-162 (389)
154 PLN02324 triacylglycerol lipas 45.3 53 0.0011 33.9 6.2 71 169-240 192-267 (415)
155 PF03283 PAE: Pectinacetyleste 44.8 1.3E+02 0.0028 30.5 9.0 132 101-240 34-199 (361)
156 PLN02761 lipase class 3 family 44.3 51 0.0011 35.0 6.1 71 170-240 268-344 (527)
157 PRK14566 triosephosphate isome 43.0 47 0.001 32.1 5.2 63 168-241 186-248 (260)
158 PRK14567 triosephosphate isome 42.9 51 0.0011 31.7 5.5 63 168-241 176-238 (253)
159 PLN02310 triacylglycerol lipas 42.1 54 0.0012 33.7 5.8 65 171-240 186-251 (405)
160 PLN00413 triacylglycerol lipas 41.6 29 0.00064 36.3 3.8 39 174-215 268-306 (479)
161 PLN02934 triacylglycerol lipas 41.4 60 0.0013 34.3 6.1 39 174-215 305-343 (515)
162 PRK11071 esterase YqiA; Provis 40.0 34 0.00074 31.0 3.7 71 119-211 2-79 (190)
163 PF09292 Neil1-DNA_bind: Endon 39.8 17 0.00038 23.9 1.2 11 119-129 25-35 (39)
164 PF07819 PGAP1: PGAP1-like pro 39.0 1.4E+02 0.003 28.0 7.7 66 171-243 61-129 (225)
165 KOG4569 Predicted lipase [Lipi 38.2 59 0.0013 32.5 5.4 61 174-240 155-215 (336)
166 PLN02847 triacylglycerol lipas 37.7 55 0.0012 35.3 5.2 62 166-235 223-288 (633)
167 PLN03037 lipase class 3 family 36.5 76 0.0016 33.7 5.9 65 171-239 295-360 (525)
168 PF06500 DUF1100: Alpha/beta h 36.0 16 0.00035 37.5 1.0 108 116-241 188-299 (411)
169 PF03096 Ndr: Ndr family; Int 35.1 22 0.00047 34.7 1.6 62 343-428 219-280 (283)
170 PF03403 PAF-AH_p_II: Platelet 35.0 30 0.00064 35.3 2.7 37 194-241 229-265 (379)
171 PLN02162 triacylglycerol lipas 34.5 52 0.0011 34.4 4.3 38 174-214 262-299 (475)
172 KOG1553 Predicted alpha/beta h 34.0 1.1E+02 0.0023 31.0 6.1 95 116-237 241-344 (517)
173 PF00151 Lipase: Lipase; Inte 34.0 31 0.00068 34.5 2.6 48 168-216 126-173 (331)
174 PF07389 DUF1500: Protein of u 33.4 34 0.00074 27.0 2.1 38 173-218 6-43 (100)
175 PF10081 Abhydrolase_9: Alpha/ 32.9 58 0.0013 31.8 4.1 36 169-204 85-120 (289)
176 PF10731 Anophelin: Thrombin i 32.7 31 0.00066 25.2 1.6 17 1-17 1-17 (65)
177 PF15613 WHIM2: WSTF, HB1, Itc 32.2 90 0.002 20.7 3.7 28 102-129 11-38 (38)
178 PF00756 Esterase: Putative es 31.3 38 0.00082 31.6 2.6 51 180-241 102-153 (251)
179 KOG3043 Predicted hydrolase re 29.3 99 0.0021 29.3 4.8 72 343-425 164-238 (242)
180 PF08840 BAAT_C: BAAT / Acyl-C 29.3 1.2E+02 0.0026 28.0 5.5 48 343-408 115-163 (213)
181 COG2945 Predicted hydrolase of 28.0 49 0.0011 30.5 2.5 55 344-424 150-204 (210)
182 PF03583 LIP: Secretory lipase 27.7 1.6E+02 0.0035 28.7 6.3 67 170-241 45-116 (290)
183 PRK06762 hypothetical protein; 27.4 36 0.00078 29.7 1.6 21 119-140 2-24 (166)
184 COG3896 Chloramphenicol 3-O-ph 27.1 50 0.0011 29.6 2.3 26 119-145 23-52 (205)
185 KOG2369 Lecithin:cholesterol a 26.8 73 0.0016 33.3 3.8 62 150-214 141-203 (473)
186 COG4425 Predicted membrane pro 26.1 87 0.0019 32.6 4.1 36 169-204 373-408 (588)
187 PF08237 PE-PPE: PE-PPE domain 25.8 1.2E+02 0.0025 28.6 4.8 61 169-237 29-89 (225)
188 PF10503 Esterase_phd: Esteras 25.7 62 0.0013 30.4 2.9 27 343-369 169-195 (220)
189 PF15253 STIL_N: SCL-interrupt 25.6 75 0.0016 32.7 3.6 35 89-126 200-235 (410)
190 KOG1454 Predicted hydrolase/ac 25.2 66 0.0014 32.0 3.2 40 171-213 109-148 (326)
191 PF06821 Ser_hydrolase: Serine 24.8 1.4E+02 0.003 26.7 4.9 39 192-239 54-92 (171)
192 PF05057 DUF676: Putative seri 24.2 82 0.0018 29.2 3.5 47 170-217 56-102 (217)
193 PF01738 DLH: Dienelactone hyd 23.8 2.7E+02 0.0059 25.2 6.9 62 342-423 144-210 (218)
194 TIGR01840 esterase_phb esteras 23.7 59 0.0013 29.7 2.4 27 344-370 169-195 (212)
195 PF02129 Peptidase_S15: X-Pro 23.7 1.1E+02 0.0025 29.1 4.4 123 103-242 4-140 (272)
196 KOG2541 Palmitoyl protein thio 23.6 3.9E+02 0.0085 26.1 7.8 88 115-220 21-115 (296)
197 PF04414 tRNA_deacylase: D-ami 23.3 1.7E+02 0.0037 27.3 5.3 48 167-217 104-152 (213)
198 KOG3101 Esterase D [General fu 23.3 4E+02 0.0088 25.2 7.5 164 88-266 8-203 (283)
199 PLN02429 triosephosphate isome 23.1 1.6E+02 0.0034 29.4 5.2 63 168-241 236-299 (315)
200 PF02402 Lysis_col: Lysis prot 22.9 31 0.00066 23.6 0.2 18 1-18 1-18 (46)
201 KOG3724 Negative regulator of 22.5 1.4E+02 0.0031 33.4 5.1 92 116-217 88-202 (973)
202 PF06028 DUF915: Alpha/beta hy 22.2 3E+02 0.0066 26.4 7.0 65 342-427 183-255 (255)
203 PF11587 Prion_bPrPp: Major pr 22.2 28 0.00061 21.6 -0.1 17 1-17 1-17 (29)
204 COG4569 MhpF Acetaldehyde dehy 22.2 74 0.0016 29.6 2.5 26 387-412 257-282 (310)
205 PF06259 Abhydrolase_8: Alpha/ 22.1 1.2E+02 0.0026 27.5 3.9 37 170-208 88-124 (177)
206 PF10605 3HBOH: 3HB-oligomer h 21.7 1.3E+02 0.0028 32.7 4.5 74 342-431 554-642 (690)
207 TIGR03712 acc_sec_asp2 accesso 21.5 4.5E+02 0.0097 27.9 8.3 114 103-241 277-393 (511)
208 PF01583 APS_kinase: Adenylyls 21.2 55 0.0012 29.0 1.5 28 118-146 1-34 (156)
209 KOG2183 Prolylcarboxypeptidase 21.2 1.5E+02 0.0032 30.8 4.6 42 168-214 143-184 (492)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-99 Score=767.54 Aligned_cols=362 Identities=47% Similarity=0.888 Sum_probs=325.9
Q ss_pred cccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcC
Q 042005 69 LKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK 148 (432)
Q Consensus 69 ~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~ 148 (432)
.++.++|++|||++.+++|++|||||+|+++.+++||||||||+++|++|||||||||||||||++ |+|.|+|||+++.
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~ 102 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKY 102 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcC
Confidence 346788999999998899999999999998889999999999999999999999999999999996 9999999999999
Q ss_pred CCCeeecCCCCCCC---------------CCc------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccc
Q 042005 149 DGKTLYQNEYAWNK---------------DYK------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYI 207 (432)
Q Consensus 149 ~~~~l~~N~~SW~~---------------~~~------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yv 207 (432)
+|.+|..||||||| +|+ .++|+.+|+|++.||++||++||||++|+|||+|||||||||
T Consensus 103 ~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YV 182 (454)
T KOG1282|consen 103 NGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYV 182 (454)
T ss_pred CCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceeh
Confidence 98899999999999 232 258899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc-----CCCChHHHH
Q 042005 208 PQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS-----LNSSDKVCL 282 (432)
Q Consensus 208 P~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~-----~~~~~~~C~ 282 (432)
|+||++|+++|+...++.|||||++||||++|+..+..++.+|+|.||+|++++++.+++.|.... ....+..|.
T Consensus 183 P~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~ 262 (454)
T KOG1282|consen 183 PALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCN 262 (454)
T ss_pred HHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHH
Confidence 999999999997544578999999999999999999999999999999999999999999998742 123467899
Q ss_pred HHHHHHH-HhcCCCcccccCCCcCCCCC-------------Cc-C---CCCcCccc---cc-----c--ccc--------
Q 042005 283 EFIDQGD-AAAGNIYSYDIYAPLCNSSS-------------KF-N---TEIANSGE---IN-----R--NWK-------- 326 (432)
Q Consensus 283 ~~~~~~~-~~~g~~n~Ydi~~~~c~~~~-------------~~-~---~pYLN~~~---~~-----~--~w~-------- 326 (432)
.+++.+. ...++++.|+++.+.|.... .+ . ..|||+++ ++ . .|.
T Consensus 263 ~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~ 342 (454)
T KOG1282|consen 263 KAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNY 342 (454)
T ss_pred HHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhc
Confidence 9998888 55578999999888897411 01 1 23999999 12 1 364
Q ss_pred ---cCCCCcHHHHHHHHHcC-CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeec-CeeeeEEEEecceEEEEE
Q 042005 327 ---DKPQTVLPIIQELMAEG-IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQ-GEVGGYAVGYQNLTFVTV 401 (432)
Q Consensus 327 ---d~~~~~~~~l~~LL~~g-irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~-~~~~G~~k~~~nLTf~~V 401 (432)
+...++++.+..++.++ +|||||+||.|++||+.||++||++|++....+|+||+++ +|+|||+++|+||||+||
T Consensus 343 ~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tV 422 (454)
T KOG1282|consen 343 NYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATV 422 (454)
T ss_pred ccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEE
Confidence 45678889999999855 9999999999999999999999999999999999999995 899999999999999999
Q ss_pred cCCcccccccChHHHHHHHHHHHcCCCCCC
Q 042005 402 RGAGHFVPSYQPARALVLFSSFINGTLPPP 431 (432)
Q Consensus 402 ~~AGHmvP~dqP~~a~~m~~~fl~~~~~~~ 431 (432)
+|||||||.|||++|++||++||+|+++|.
T Consensus 423 rGaGH~VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 423 RGAGHMVPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred eCCcccCCCCCcHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999985
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.1e-87 Score=686.68 Aligned_cols=360 Identities=28% Similarity=0.592 Sum_probs=304.2
Q ss_pred CcccCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEc
Q 042005 68 GLKDKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVN 147 (432)
Q Consensus 68 ~~~~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~ 147 (432)
+.+++|+|+.|||++.++++++|||||+|+++.+++||||||||+++|+++||||||||||||||+ +|+|.|+|||+++
T Consensus 18 ~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~ 96 (437)
T PLN02209 18 HVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALK 96 (437)
T ss_pred cCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceec
Confidence 344778999999998888999999999998777899999999999999999999999999999999 5999999999998
Q ss_pred CCC-----CeeecCCCCCCC---------------CCcc-----cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccc
Q 042005 148 KDG-----KTLYQNEYAWNK---------------DYKV-----NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESY 202 (432)
Q Consensus 148 ~~~-----~~l~~N~~SW~~---------------~~~~-----~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESY 202 (432)
.++ .++++||||||+ +|.. .+++++|+++++||+.||++||+|+++||||+||||
T Consensus 97 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 176 (437)
T PLN02209 97 NKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSY 176 (437)
T ss_pred cCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCc
Confidence 763 379999999999 2321 245678899999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHH
Q 042005 203 AGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKV 280 (432)
Q Consensus 203 aG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~ 280 (432)
||||||.+|++|+++|++.+++.||||||+||||++||..|..++.+|++.+|+|++++++++++.|.... ....+..
T Consensus 177 aG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~ 256 (437)
T PLN02209 177 SGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKK 256 (437)
T ss_pred CceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHH
Confidence 99999999999999886544568999999999999999999999999999999999999999999996421 1234578
Q ss_pred HHHHHHHHHHhcCCCcccccCCCcCCCCCC------c-C------CCCcCccc---cc-------cccccCC--------
Q 042005 281 CLEFIDQGDAAAGNIYSYDIYAPLCNSSSK------F-N------TEIANSGE---IN-------RNWKDKP-------- 329 (432)
Q Consensus 281 C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~------~-~------~pYLN~~~---~~-------~~w~d~~-------- 329 (432)
|..++..+......+|.|++....|..... + . ..|||+++ .+ ..|..+.
T Consensus 257 C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~~~~~d 336 (437)
T PLN02209 257 CLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPYKSD 336 (437)
T ss_pred HHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchhhcccc
Confidence 988777665555667777654444542211 1 0 23999998 12 2464321
Q ss_pred -CCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc-eEEEEEcCCccc
Q 042005 330 -QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHF 407 (432)
Q Consensus 330 -~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHm 407 (432)
.+..+.+..+|++|+|||||+||.|++||+.|+++|+++|+|+++++|++|+++++++||+|+|+| |||++|+|||||
T Consensus 337 ~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHm 416 (437)
T PLN02209 337 IRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHT 416 (437)
T ss_pred hhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCC
Confidence 123344445555789999999999999999999999999999999999999999999999999996 999999999999
Q ss_pred ccccChHHHHHHHHHHHcCCCC
Q 042005 408 VPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 408 vP~dqP~~a~~m~~~fl~~~~~ 429 (432)
|| |||++|++||++|+.+++|
T Consensus 417 Vp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 417 AE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred cC-cCHHHHHHHHHHHHcCCCC
Confidence 98 7999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.2e-87 Score=683.21 Aligned_cols=357 Identities=28% Similarity=0.599 Sum_probs=306.2
Q ss_pred cCCccccCCCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCC-
Q 042005 71 DKDKIESLPGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKD- 149 (432)
Q Consensus 71 ~~~~v~~lpg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~- 149 (432)
..+.|++|||++.++++++||||++|+++.+++||||||||+++|+++||||||||||||||+ .|+|+|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 446789999998778899999999998767789999999999999999999999999999999 599999999998643
Q ss_pred ----CCeeecCCCCCCC---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 150 ----GKTLYQNEYAWNK---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 150 ----~~~l~~N~~SW~~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
+.++.+||+|||+ +|. ..+|+++|++++.||++||++||+|+++||||+|||||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~ 177 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGM 177 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccce
Confidence 3578999999999 221 1245567799999999999999999999999999999999
Q ss_pred cchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHHHHH
Q 042005 206 YIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKVCLE 283 (432)
Q Consensus 206 yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~C~~ 283 (432)
|||++|++|+++|+...++.||||||+||||++||..|..++.+|+|.+|||++++++.+++.|.... ...+...|..
T Consensus 178 yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~ 257 (433)
T PLN03016 178 IVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLK 257 (433)
T ss_pred ehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHH
Confidence 99999999999986544568999999999999999999999999999999999999999999997431 1234678998
Q ss_pred HHHHHHHhcCCCcccccCCCcCCCCC----Cc-------CCCCcCccc---cc-------cccccCCC---------CcH
Q 042005 284 FIDQGDAAAGNIYSYDIYAPLCNSSS----KF-------NTEIANSGE---IN-------RNWKDKPQ---------TVL 333 (432)
Q Consensus 284 ~~~~~~~~~g~~n~Ydi~~~~c~~~~----~~-------~~pYLN~~~---~~-------~~w~d~~~---------~~~ 333 (432)
++..+....+.+|+|||+.+.|.... .+ ...|||+++ .+ ..|..|.. +..
T Consensus 258 ~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~~~~d~~~~~ 337 (433)
T PLN03016 258 LTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSI 337 (433)
T ss_pred HHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccccccccchhh
Confidence 88887777889999999866564211 01 024999997 12 24664322 233
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc-eEEEEEcCCcccccccC
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHmvP~dq 412 (432)
+.+..++.+++|||||+||.|++||+.||++|+++|+|++.++|++|+++++++||+|+|+| |||++|++|||||| +|
T Consensus 338 ~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~q 416 (433)
T PLN03016 338 PYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YR 416 (433)
T ss_pred HHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CC
Confidence 44455555789999999999999999999999999999999999999999999999999985 99999999999998 79
Q ss_pred hHHHHHHHHHHHcCCCC
Q 042005 413 PARALVLFSSFINGTLP 429 (432)
Q Consensus 413 P~~a~~m~~~fl~~~~~ 429 (432)
|++|++||++|+++++|
T Consensus 417 P~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 417 PNETFIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=3.1e-87 Score=685.54 Aligned_cols=347 Identities=40% Similarity=0.718 Sum_probs=288.2
Q ss_pred CCCCCCCCceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCC-CeeecCC
Q 042005 79 PGQPLGVNFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDG-KTLYQNE 157 (432)
Q Consensus 79 pg~~~~~~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~-~~l~~N~ 157 (432)
||++.++++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.++ .+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 8888889999999999999777899999999999999999999999999999999 5999999999999543 6899999
Q ss_pred CCCCC-------------CCc--------ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHH
Q 042005 158 YAWNK-------------DYK--------VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216 (432)
Q Consensus 158 ~SW~~-------------~~~--------~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~ 216 (432)
+|||+ +++ ..+++++|+++++||++||++||+++++||||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999 111 246789999999999999999999999999999999999999999999999
Q ss_pred hccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhhhcccc-cCCCChHHHHHHHHHHHH-----
Q 042005 217 NNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTSSYNFA-SLNSSDKVCLEFIDQGDA----- 290 (432)
Q Consensus 217 ~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~-~~~~~~~~C~~~~~~~~~----- 290 (432)
++++...+.||||||+||||++||..|..++.+|++.+|+|++++++++.+.|... ........|..+.+.+..
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 239 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAIS 239 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcccc
Confidence 99764456899999999999999999999999999999999999999999998653 223566789888777664
Q ss_pred -hcCCCcccccCCCcCCC-----CC----CcC-----CCCcCccc---cc-------cccc-------------cCCCCc
Q 042005 291 -AAGNIYSYDIYAPLCNS-----SS----KFN-----TEIANSGE---IN-------RNWK-------------DKPQTV 332 (432)
Q Consensus 291 -~~g~~n~Ydi~~~~c~~-----~~----~~~-----~pYLN~~~---~~-------~~w~-------------d~~~~~ 332 (432)
..+++|+||++.+.|.. .. .+. ..|||+++ .+ ..|. +.+.++
T Consensus 240 ~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~~~~ 319 (415)
T PF00450_consen 240 QCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDFMPSS 319 (415)
T ss_dssp HHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-SBC
T ss_pred cccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccccccc
Confidence 34799999999863320 00 000 23999987 11 1333 456788
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeee--cCeeeeEEEEecceEEEEEcCCcccccc
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYT--QGEVGGYAVGYQNLTFVTVRGAGHFVPS 410 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~--~~~~~G~~k~~~nLTf~~V~~AGHmvP~ 410 (432)
.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|++|.. +++++||+|+|+||||++|++||||||+
T Consensus 320 ~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~ 399 (415)
T PF00450_consen 320 IPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ 399 (415)
T ss_dssp HHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH
T ss_pred hhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh
Confidence 89999999999999999999999999999999999999999999999987 8999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcC
Q 042005 411 YQPARALVLFSSFING 426 (432)
Q Consensus 411 dqP~~a~~m~~~fl~~ 426 (432)
|||+++++||++||+|
T Consensus 400 dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 400 DQPEAALQMFRRFLKG 415 (415)
T ss_dssp HSHHHHHHHHHHHHCT
T ss_pred hCHHHHHHHHHHHhcC
Confidence 9999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.3e-81 Score=649.02 Aligned_cols=346 Identities=27% Similarity=0.514 Sum_probs=292.0
Q ss_pred CCCCceeEEeeEEecC-CCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCC
Q 042005 83 LGVNFDQYSGYVNVDS-QDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWN 161 (432)
Q Consensus 83 ~~~~~~~ysGyl~v~~-~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~ 161 (432)
.+.++++|||||+|++ ..+++||||||||+++|+++||||||||||||||| +|+|+|||||+++.++.++..||||||
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccc
Confidence 3467899999999975 45789999999999999999999999999999999 599999999999998778999999999
Q ss_pred C---------------CCc-----ccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhcccc
Q 042005 162 K---------------DYK-----VNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHA 221 (432)
Q Consensus 162 ~---------------~~~-----~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~ 221 (432)
+ +|. ..+++++|+|+++||+.||++||+++.+|+||+||||||+|||.+|.+|+++|+..
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~ 199 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKG 199 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcccc
Confidence 9 221 24567899999999999999999999999999999999999999999999998764
Q ss_pred ccceeeeeeeEeccccccccccchhhHHHHHh-------cCCCCHHHHHhHhh---hcccc--c----CCCChHHHHHHH
Q 042005 222 NQTIINLRGIAMGNALIDLETMMKGTVDFYWT-------HALMPDEIYHGLTS---SYNFA--S----LNSSDKVCLEFI 285 (432)
Q Consensus 222 ~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~-------~glI~~~~~~~~~~---~C~~~--~----~~~~~~~C~~~~ 285 (432)
...+||||||+||||++||..|..++.+|+|. +|+|++++++++.+ .|... . .......|..+.
T Consensus 200 ~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~ 279 (462)
T PTZ00472 200 DGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVAR 279 (462)
T ss_pred CCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHH
Confidence 45789999999999999999999999999996 58999999988764 34321 0 011234465444
Q ss_pred HHHHH-----hcCCCcccccCCCcCCCCCCcC----CCCcCccc---cc----cccc------------cCCCCcHHHHH
Q 042005 286 DQGDA-----AAGNIYSYDIYAPLCNSSSKFN----TEIANSGE---IN----RNWK------------DKPQTVLPIIQ 337 (432)
Q Consensus 286 ~~~~~-----~~g~~n~Ydi~~~~c~~~~~~~----~pYLN~~~---~~----~~w~------------d~~~~~~~~l~ 337 (432)
..|.. ..+++|+|||+.+ |..+.... +.|||+++ .+ ..|. |.+.++.+.++
T Consensus 280 ~~c~~~~~~~~~~g~n~Ydi~~~-c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~~~~D~~~~~~~~l~ 358 (462)
T PTZ00472 280 ALCNEYIAVYSATGLNNYDIRKP-CIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLMFEMDWMKNFNYTVP 358 (462)
T ss_pred HHHHHHHHHHHhcCCChhheecc-CCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHHhhhccccchHHHHH
Confidence 33321 1368999999975 75432111 34999998 22 2465 34466778999
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCc-----cceee-eecCeeeeEEEEec-----ceEEEEEcCCcc
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRT-----AWYPW-YTQGEVGGYAVGYQ-----NLTFVTVRGAGH 406 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~-----~~~~w-~~~~~~~G~~k~~~-----nLTf~~V~~AGH 406 (432)
.||++|+|||||+||.|++||+.|+++|+++|+|++++ +|++| .++++++||+|+|+ ||||++|++|||
T Consensus 359 ~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH 438 (462)
T PTZ00472 359 GLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGH 438 (462)
T ss_pred HHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999999975 56899 56889999999999 999999999999
Q ss_pred cccccChHHHHHHHHHHHcCCCCC
Q 042005 407 FVPSYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 407 mvP~dqP~~a~~m~~~fl~~~~~~ 430 (432)
|||+|||+++++|+++|+.+++++
T Consensus 439 ~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 439 MVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred cChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999874
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.2e-59 Score=465.53 Aligned_cols=262 Identities=27% Similarity=0.531 Sum_probs=222.2
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~ 246 (432)
++|+++|+|++.||+.||++||+|+++||||+||||||||||+||++|+++|...+.+.||||||+|||||++|..+..+
T Consensus 25 ~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~ 104 (319)
T PLN02213 25 TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNF 104 (319)
T ss_pred cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchh
Confidence 46667789999999999999999999999999999999999999999999886544568999999999999999999999
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhccccc--CCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCC----Cc-------CC
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFAS--LNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSS----KF-------NT 313 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~--~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~----~~-------~~ 313 (432)
+.+|+|.+|+|++++++.+++.|.... ...+...|..++..+....+.+|+||++.+.|.... .+ .+
T Consensus 105 ~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 184 (319)
T PLN02213 105 RIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIE 184 (319)
T ss_pred HhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhhcccCcccCccCCCCCcccchhHHHH
Confidence 999999999999999999999996422 123457899888877777788999999865564210 01 02
Q ss_pred CCcCccc---cc-------cccccCCC---------CcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCC
Q 042005 314 EIANSGE---IN-------RNWKDKPQ---------TVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVR 374 (432)
Q Consensus 314 pYLN~~~---~~-------~~w~d~~~---------~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~ 374 (432)
.|||+++ .+ ..|..|.. +..+.+..+|.+++|||||+||.|++||+.|+++|+++|+|++.
T Consensus 185 ~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~ 264 (319)
T PLN02213 185 CWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPI 264 (319)
T ss_pred HHhCCHHHHHHhCcCCCCCCCCccCCcccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCC
Confidence 3999997 12 24764422 23344445555789999999999999999999999999999999
Q ss_pred ccceeeeecCeeeeEEEEecc-eEEEEEcCCcccccccChHHHHHHHHHHHcCCCC
Q 042005 375 TAWYPWYTQGEVGGYAVGYQN-LTFVTVRGAGHFVPSYQPARALVLFSSFINGTLP 429 (432)
Q Consensus 375 ~~~~~w~~~~~~~G~~k~~~n-LTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 429 (432)
++|++|+++++++||+|+|+| |||++|++|||||| +||++|++||++||++++|
T Consensus 265 ~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 265 HNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999999999999999986 99999999999998 6999999999999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-55 Score=442.44 Aligned_cols=333 Identities=26% Similarity=0.425 Sum_probs=261.2
Q ss_pred CceeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeee--cCCCCCCC-
Q 042005 86 NFDQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLY--QNEYAWNK- 162 (432)
Q Consensus 86 ~~~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~--~N~~SW~~- 162 (432)
++++|+||..+. ..+|||+|+++++|.++|+|+||||||||||+ .|+|.|+||.+|+.+. ++. .||+||++
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~-~P~~~~NP~SW~~~ 146 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGT-SPSYPDNPGSWLDF 146 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCC-CCCCCCCccccccC
Confidence 367888884443 23999999999999999999999999999999 5999999999999883 344 59999999
Q ss_pred ------------CCcc-------cCChhhHHHHHHHHHHHHHHCCCCCCC--CeEEEccccccccchHHHHHHHHhcccc
Q 042005 163 ------------DYKV-------NGDIRTARDSYTFLVSWLARFPEYKTR--DFFIAGESYAGHYIPQLAQAILYNNQHA 221 (432)
Q Consensus 163 ------------~~~~-------~~~~~~a~d~~~fL~~F~~~fP~~~~~--~~yI~GESYaG~yvP~lA~~I~~~n~~~ 221 (432)
+|+. .+-+.+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||..|+++|..
T Consensus 147 adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~- 225 (498)
T COG2939 147 ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA- 225 (498)
T ss_pred CceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-
Confidence 2322 244578999999999999999999888 999999999999999999999998632
Q ss_pred ccceeeeeeeEeccc-cccccccchhhHHHHHhc----CCCCHHHHHhHhhhccccc-------C--CCChHHHHHHHHH
Q 042005 222 NQTIINLRGIAMGNA-LIDLETMMKGTVDFYWTH----ALMPDEIYHGLTSSYNFAS-------L--NSSDKVCLEFIDQ 287 (432)
Q Consensus 222 ~~~~inLkGi~IGNg-~idp~~~~~~~~~~~~~~----glI~~~~~~~~~~~C~~~~-------~--~~~~~~C~~~~~~ 287 (432)
.+-.+||++++|||| +|||..++..+..++... +..+.+.++.+++.|+... . ......|..+...
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 234799999999999 999999999999998854 4566777888888776421 1 1233457666555
Q ss_pred HHHhc------C---CCcccccCCCcCCCCCC---cC------CCCcC-ccc------cccccc---------------c
Q 042005 288 GDAAA------G---NIYSYDIYAPLCNSSSK---FN------TEIAN-SGE------INRNWK---------------D 327 (432)
Q Consensus 288 ~~~~~------g---~~n~Ydi~~~~c~~~~~---~~------~pYLN-~~~------~~~~w~---------------d 327 (432)
+.... . ..|+||++.. |..... +. ..|++ .++ .+.+|. +
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a~~~f~~~~~~ 384 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIREE-CRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDAMTDFLTFTGG 384 (498)
T ss_pred HHhcchhhhccccccccccccchhh-cCCCCcccccccceeeccccccccchhccccccccchhccchHHHHhhhhhcCC
Confidence 54322 2 3899999874 754321 11 22555 222 111221 2
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccce-----eeee--cCeeeeEEEEecceEEEE
Q 042005 328 KPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWY-----PWYT--QGEVGGYAVGYQNLTFVT 400 (432)
Q Consensus 328 ~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~-----~w~~--~~~~~G~~k~~~nLTf~~ 400 (432)
..+.....+..++.+++.+++|.||.|.+|++.|++.|..+|+|.+...|. +|.. ..+..|-.++++|+||++
T Consensus 385 ~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r 464 (498)
T COG2939 385 WAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLR 464 (498)
T ss_pred cccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccCCceEEE
Confidence 234555677788888999999999999999999999999999999987553 3433 456777788889999999
Q ss_pred EcCCcccccccChHHHHHHHHHHHcC
Q 042005 401 VRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 401 V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
++.||||||+|+|+.+++|++.|+.+
T Consensus 465 ~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 465 IYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EecCcceeecCChHHHHHHHHHHHhh
Confidence 99999999999999999999999987
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-55 Score=411.31 Aligned_cols=328 Identities=25% Similarity=0.389 Sum_probs=267.7
Q ss_pred EEeeEEecCCCCceEEEEEEEcCCC-CCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCCC------
Q 042005 90 YSGYVNVDSQDGRSLFYYFVESPQN-SSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK------ 162 (432)
Q Consensus 90 ysGyl~v~~~~~~~lFywf~es~~~-p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~------ 162 (432)
-+||++|+. ++|+|||++.+..+ ...+|+.|||+||||.||..+|+|.|+||+..+ +.+|+++|.+
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 379999984 69999999998754 378999999999999999999999999999865 6789999999
Q ss_pred ---------------CCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceee
Q 042005 163 ---------------DYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN 227 (432)
Q Consensus 163 ---------------~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~in 227 (432)
++-+++++++|.|+.+.|+.||..||||+.+||||+-|||||+..+.+|..+.+..+. +..+.|
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~-G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKR-GEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhc-Cceeec
Confidence 2224688999999999999999999999999999999999999999999999998876 467899
Q ss_pred eeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHhh---hcccc-cC---CCChHHHHHHHHHHHHhcCCCccccc
Q 042005 228 LRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLTS---SYNFA-SL---NSSDKVCLEFIDQGDAAAGNIYSYDI 300 (432)
Q Consensus 228 LkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~~---~C~~~-~~---~~~~~~C~~~~~~~~~~~g~~n~Ydi 300 (432)
+.||++|++||+|..-..+..+|+++.+++|+...+...+ .|... +. ..+..........+...+.+++.|||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNi 235 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNI 235 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeee
Confidence 9999999999999999999999999999999988876543 34321 10 11211112223344456678999999
Q ss_pred CCCcCCCCCCcC---------------------------CCCcCccc-----cc---cccc------------cCCCCcH
Q 042005 301 YAPLCNSSSKFN---------------------------TEIANSGE-----IN---RNWK------------DKPQTVL 333 (432)
Q Consensus 301 ~~~~c~~~~~~~---------------------------~pYLN~~~-----~~---~~w~------------d~~~~~~ 333 (432)
..++-.++...+ +.+||-+- .+ ..|. |+++++.
T Consensus 236 l~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKPvi 315 (414)
T KOG1283|consen 236 LTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKPVI 315 (414)
T ss_pred eccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhcccHH
Confidence 876544332110 01444432 11 2343 7789999
Q ss_pred HHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccce--ee---eecCeeeeEEEEecceEEEEEcCCcccc
Q 042005 334 PIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWY--PW---YTQGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 334 ~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~--~w---~~~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
..+.+||++|++|.||+|++|.||++.|+++|+.+|+|++...++ +| +++-..+||.|+|+||.|..|..|||||
T Consensus 316 ~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmv 395 (414)
T KOG1283|consen 316 SKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMV 395 (414)
T ss_pred HHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcc
Confidence 999999999999999999999999999999999999999987543 33 4466789999999999999999999999
Q ss_pred cccChHHHHHHHHHHHc
Q 042005 409 PSYQPARALVLFSSFIN 425 (432)
Q Consensus 409 P~dqP~~a~~m~~~fl~ 425 (432)
|.|+|+.|.+|++.+.+
T Consensus 396 p~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 396 PADNPAAASHMLRHVTK 412 (414)
T ss_pred cCCCHHHHhhheeeccc
Confidence 99999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.78 E-value=1.6e-06 Score=82.44 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=49.0
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHH
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARAL 417 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~ 417 (432)
.+.+-.++||+.+|+.|.+ +....+.+.+.+. +.+++.+.++||+++.++|++..
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~ 280 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA------------------------GSRLVVFPDGSHMTMIEDPEVYF 280 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc------------------------CCeEEEeCCCCCCcccCCHHHHH
Confidence 3334468999999999985 4455555555432 34678899999999999999999
Q ss_pred HHHHHHHc
Q 042005 418 VLFSSFIN 425 (432)
Q Consensus 418 ~m~~~fl~ 425 (432)
+.+.+|++
T Consensus 281 ~~i~~fl~ 288 (288)
T TIGR01250 281 KLLSDFIR 288 (288)
T ss_pred HHHHHHhC
Confidence 99999984
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.68 E-value=6.4e-06 Score=80.77 Aligned_cols=69 Identities=20% Similarity=0.147 Sum_probs=52.3
Q ss_pred HHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHH
Q 042005 338 ELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARAL 417 (432)
Q Consensus 338 ~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~ 417 (432)
.+-+-.++|||..|+.|.+++... +.+.+.+. .-.+..+..+.++||+++.++|+...
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~---------------------~~~~~~~~~i~~~gH~~~~e~p~~~~ 291 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGD-AILQKRIP---------------------GAAGQPHPTIKGAGHFLQEDSGEELA 291 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCch-HHHHhhcc---------------------cccccceeeecCCCccchhhChHHHH
Confidence 344457999999999999999754 44433332 01134567899999999999999999
Q ss_pred HHHHHHHcCCC
Q 042005 418 VLFSSFINGTL 428 (432)
Q Consensus 418 ~m~~~fl~~~~ 428 (432)
+.+.+|+...|
T Consensus 292 ~~l~~fl~~~~ 302 (302)
T PRK00870 292 EAVLEFIRATP 302 (302)
T ss_pred HHHHHHHhcCC
Confidence 99999997654
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.57 E-value=2.6e-05 Score=75.11 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=51.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+..|..|.+++..-.+.+.+.+. +..++.|.+|||+++.++|+...+++.
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 35899999999999999866666665543 667889999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 12
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.52 E-value=8.6e-06 Score=76.30 Aligned_cols=59 Identities=15% Similarity=0.128 Sum_probs=50.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.+||....+.+.+.+. +..+..+.++||+.+.++|+...+.+.+
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAALP------------------------NAQLKLLPYGGHASNVTDPETFNRALLD 253 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhcC------------------------CceEEEECCCCCCccccCHHHHHHHHHH
Confidence 5899999999999999887777665542 4567889999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 254 fl~ 256 (257)
T TIGR03611 254 FLK 256 (257)
T ss_pred Hhc
Confidence 985
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=98.45 E-value=7.2e-05 Score=72.07 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=51.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChH---HHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPA---RALV 418 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~---~a~~ 418 (432)
-..+|||.+|+.|.+||....+.+.+.+. .+-++.++.+|||++..++|+ ++++
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-----------------------~~~~~~~~~~~gH~~~~e~~~~~~~~~~ 264 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN-----------------------CNREIKIYEGAKHHLHKETDEVKKSVMK 264 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc-----------------------CCceEEEeCCCcccccCCchhHHHHHHH
Confidence 35899999999999999999988888753 134778999999999999884 4666
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
-+.+||.+.
T Consensus 265 ~~~~~l~~~ 273 (276)
T PHA02857 265 EIETWIFNR 273 (276)
T ss_pred HHHHHHHHh
Confidence 677788653
No 14
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.38 E-value=2.2e-05 Score=72.70 Aligned_cols=60 Identities=25% Similarity=0.385 Sum_probs=50.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+|++.+|+.|.++|....+.+.+.+. +.++..+.++||+++.++|+...+.++
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHH
Confidence 35899999999999999876666655532 456789999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
.|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9973
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.34 E-value=5.6e-05 Score=73.68 Aligned_cols=60 Identities=22% Similarity=0.290 Sum_probs=50.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|||.+|..|.++|....+. +.++. .+.+++.+.+|||+++.++|++..+.+.+
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~-~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRA-YANFD-----------------------AVEDFIVLPGVGHCPQDEAPELVNPLIES 289 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHH-HHhcC-----------------------CccceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 5899999999999999876655 43322 23567899999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 290 fl~~ 293 (294)
T PLN02824 290 FVAR 293 (294)
T ss_pred HHhc
Confidence 9964
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.33 E-value=4.6e-05 Score=74.37 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.+++.... +.+.+.+ .+.++.++.+|||+++.++|+...+++.
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~i------------------------p~~~~~~i~~aGH~~~~e~Pe~~~~~i~ 282 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATF------------------------PDHVLVELPNAKHFIQEDAPDRIAAAII 282 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhc------------------------CCCeEEEcCCCcccccccCHHHHHHHHH
Confidence 59999999999998876543 3333443 4678899999999999999999999999
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
+|+
T Consensus 283 ~~~ 285 (286)
T PRK03204 283 ERF 285 (286)
T ss_pred Hhc
Confidence 997
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.33 E-value=5.2e-05 Score=72.37 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.++|....+.+.+.+. +..++.+.++||+++.++|+...+.+.+
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 275 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP------------------------TATLHVVPGGGHLVHEEQADGVVGLILQ 275 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc------------------------CCeEEEECCCCCcccccCHHHHHHHHHH
Confidence 5899999999999999877777766543 4456888999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 276 f~~ 278 (278)
T TIGR03056 276 AAE 278 (278)
T ss_pred HhC
Confidence 984
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.31 E-value=0.00015 Score=68.65 Aligned_cols=60 Identities=15% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+..|+.|..++....+.+.+.+ .+.++.++.++||+.+.++|+...+.+.+
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~l~~ 250 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQF------------------------PQARAHVIAGAGHWVHAEKPDAVLRAIRR 250 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhC------------------------CCcEEEEeCCCCCeeeccCHHHHHHHHHH
Confidence 479999999999988876555555443 36788999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 251 fl~~ 254 (255)
T PRK10673 251 YLND 254 (255)
T ss_pred HHhc
Confidence 9964
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.24 E-value=0.00032 Score=70.45 Aligned_cols=63 Identities=13% Similarity=0.221 Sum_probs=52.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH----HHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR----ALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~----a~~ 418 (432)
.++|||.+|+.|.+++....+.+.+++. ..+-++..+.++||++..++|++ +++
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~----------------------~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~ 336 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKAS----------------------SSDKKLKLYEDAYHSILEGEPDEMIFQVLD 336 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcC----------------------CCCceEEEeCCCeeecccCCChhhHHHHHH
Confidence 5899999999999999988887777653 12457788999999999999987 788
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
.+.+|+...
T Consensus 337 ~i~~wL~~~ 345 (349)
T PLN02385 337 DIISWLDSH 345 (349)
T ss_pred HHHHHHHHh
Confidence 888998654
No 20
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.23 E-value=1.8e-05 Score=85.76 Aligned_cols=233 Identities=16% Similarity=0.219 Sum_probs=131.8
Q ss_pred EEecCCCCceEEEEEEEcCC-CCC-CCCeEEEEcCCCChhhhhHh--hhhhcCCeEEcCCC-CeeecCCCCCCC---CCc
Q 042005 94 VNVDSQDGRSLFYYFVESPQ-NSS-SKPLVLWLNGGPGFSSFGAG--TMMELGPFRVNKDG-KTLYQNEYAWNK---DYK 165 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~-~p~-~~PlilWlnGGPGcSSl~~G--~f~E~GP~~~~~~~-~~l~~N~~SW~~---~~~ 165 (432)
+.+....+..+..|++.-.+ ++. +-|+|+++-||| +++ .| ...|.=++.- .| ..+.+|+-.=+- ++.
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~~~~~~~q~~~~--~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGYSFNPEIQVLAS--AGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-cccccchhhHHHhc--CCeEEEEeCCCCCCccHHHHH
Confidence 34433346789999987654 333 359999999999 555 34 2222211111 11 123334332211 000
Q ss_pred c----cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 166 V----NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 166 ~----~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
. .--....+|+.+++. |++..|..-...+.|+|.|||| +++..++.+.. .+|..+...|.++..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~~-------~f~a~~~~~~~~~~~ 510 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKTP-------RFKAAVAVAGGVDWL 510 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcCc-------hhheEEeccCcchhh
Confidence 0 011256778888898 9999998888889999999999 88888877642 467777666666654
Q ss_pred ccchhhHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCcccc
Q 042005 242 TMMKGTVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEI 321 (432)
Q Consensus 242 ~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~ 321 (432)
..... +. ...+...++.... .. . ....|--+.+
T Consensus 511 ~~~~~-----~~-----~~~~~~~~~~~~~----~~-~--------------~~~~~~~~sp------------------ 543 (620)
T COG1506 511 LYFGE-----ST-----EGLRFDPEENGGG----PP-E--------------DREKYEDRSP------------------ 543 (620)
T ss_pred hhccc-----cc-----hhhcCCHHHhCCC----cc-c--------------ChHHHHhcCh------------------
Confidence 32210 00 0000001110000 00 0 0000000000
Q ss_pred ccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEE
Q 042005 322 NRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTV 401 (432)
Q Consensus 322 ~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V 401 (432)
..... +-..++||.||..|..|+..-++++.+.|+-.|. +..+++.
T Consensus 544 -----------~~~~~---~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~--------------------~~~~~~~ 589 (620)
T COG1506 544 -----------IFYAD---NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK--------------------PVELVVF 589 (620)
T ss_pred -----------hhhhc---ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc--------------------eEEEEEe
Confidence 01111 1136999999999999999999999999973222 4667899
Q ss_pred cCCcccccc-cChHHHHHHHHHHH
Q 042005 402 RGAGHFVPS-YQPARALVLFSSFI 424 (432)
Q Consensus 402 ~~AGHmvP~-dqP~~a~~m~~~fl 424 (432)
++.||-... ..-...++-+.+|+
T Consensus 590 p~e~H~~~~~~~~~~~~~~~~~~~ 613 (620)
T COG1506 590 PDEGHGFSRPENRVKVLKEILDWF 613 (620)
T ss_pred CCCCcCCCCchhHHHHHHHHHHHH
Confidence 999999987 22333444444454
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.08 E-value=0.00019 Score=69.96 Aligned_cols=64 Identities=9% Similarity=0.125 Sum_probs=52.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||.+|+.|.+++.....+++..+. .+.++..+.+|||+++.++|++..+.+..
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 284 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP-----------------------NQLEITVFGAGLHFAQEDSPEEIGAAIAA 284 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh-----------------------hhcceeeccCcchhhhhcCHHHHHHHHHH
Confidence 5899999999999996666666665432 34567888999999999999999999999
Q ss_pred HHcCCCC
Q 042005 423 FINGTLP 429 (432)
Q Consensus 423 fl~~~~~ 429 (432)
|+.+...
T Consensus 285 fl~~~~~ 291 (295)
T PRK03592 285 WLRRLRL 291 (295)
T ss_pred HHHHhcc
Confidence 9976554
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.05 E-value=0.00073 Score=67.10 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=51.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH----HHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR----ALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~----a~~ 418 (432)
.++|||.+|+.|.++|....+.+.+.+.. .+-++..+.++||++..++|+. +.+
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~~----------------------~~~~l~~~~~a~H~~~~e~pd~~~~~~~~ 308 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAKS----------------------EDKTIKIYDGMMHSLLFGEPDENIEIVRR 308 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhcc----------------------CCceEEEcCCcEeeeecCCCHHHHHHHHH
Confidence 58999999999999999998888877641 2447788999999999999854 566
Q ss_pred HHHHHHcCC
Q 042005 419 LFSSFINGT 427 (432)
Q Consensus 419 m~~~fl~~~ 427 (432)
.+.+|+...
T Consensus 309 ~i~~fl~~~ 317 (330)
T PLN02298 309 DILSWLNER 317 (330)
T ss_pred HHHHHHHHh
Confidence 677787653
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.04 E-value=7.2e-05 Score=67.91 Aligned_cols=53 Identities=28% Similarity=0.419 Sum_probs=42.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALV 418 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~ 418 (432)
-+.+|++..|+.|.+++..-.+.+.+.+ ++..++++.++||+++.++|++..+
T Consensus 175 ~~~pvl~i~g~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 175 IKVPVLVIHGEDDPIVPPESAEELADKL------------------------PNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp SSSEEEEEEETTSSSSHHHHHHHHHHHS------------------------TTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cCCCeEEeecCCCCCCCHHHHHHHHHHC------------------------CCCEEEEECCCCCccHHHCHHHHhc
Confidence 3699999999999999955555554443 3567899999999999999987643
No 24
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.02 E-value=0.00037 Score=71.40 Aligned_cols=62 Identities=8% Similarity=0.005 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc-ChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY-QPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d-qP~~a~~m~~ 421 (432)
++++||.+|+.|.++|...++.+.+++.= ..-++..+.+++|++..+ .|+.+++.+.
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~~----------------------~~k~l~~~~ga~H~l~~e~~~e~v~~~I~ 381 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAAS----------------------RHKDIKLYDGFLHDLLFEPEREEVGRDII 381 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcCC----------------------CCceEEEECCCeEEeccCCCHHHHHHHHH
Confidence 69999999999999999999999887530 112446789999999776 7999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.|+.+
T Consensus 382 ~FL~~ 386 (395)
T PLN02652 382 DWMEK 386 (395)
T ss_pred HHHHH
Confidence 99864
No 25
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.00 E-value=0.0013 Score=67.51 Aligned_cols=59 Identities=17% Similarity=0.044 Sum_probs=44.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|++..|+.|.+++ ...+.+.+.++ .+..++.|.+|||+++.|+|+...+++.+
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~~-----------------------~~~~~~~i~~aGH~~~~E~P~~f~~~l~~ 380 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRMK-----------------------VPCEIIRVPQGGHFVFLDNPSGFHSAVLY 380 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHcC-----------------------CCCcEEEeCCCCCeeeccCHHHHHHHHHH
Confidence 5899999999998876 33444444432 12457899999999999999998888877
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 381 ~~~ 383 (402)
T PLN02894 381 ACR 383 (402)
T ss_pred HHH
Confidence 764
No 26
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.00 E-value=0.00067 Score=68.57 Aligned_cols=65 Identities=20% Similarity=0.251 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhH-HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT-RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
.++|||..|+.|.++|..+. ..+++.|. +...+.++.+|.+|||+++.++|++..+.+.
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~ 351 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL 351 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCCceEEEEcCCCCCCccccCHHHHHHHHH
Confidence 58999999999999998653 23444432 1224678899999999999999999999999
Q ss_pred HHHcCC
Q 042005 422 SFINGT 427 (432)
Q Consensus 422 ~fl~~~ 427 (432)
+|+...
T Consensus 352 ~FL~~~ 357 (360)
T PLN02679 352 PWLAQL 357 (360)
T ss_pred HHHHhc
Confidence 999653
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.99 E-value=0.00022 Score=66.98 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=43.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|++..|+.|.++.. ...+ .+.+++.|.++||+++.++|++..+.|..
T Consensus 188 ~~P~lii~G~~D~~~~~-----~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 237 (242)
T PRK11126 188 TFPFYYLCGERDSKFQA-----LAQQ-------------------------LALPLHVIPNAGHNAHRENPAAFAASLAQ 237 (242)
T ss_pred CCCeEEEEeCCcchHHH-----HHHH-------------------------hcCeEEEeCCCCCchhhhChHHHHHHHHH
Confidence 68999999999975421 1111 14578999999999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 238 fl~~ 241 (242)
T PRK11126 238 ILRL 241 (242)
T ss_pred HHhh
Confidence 9853
No 28
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.96 E-value=0.00079 Score=65.93 Aligned_cols=264 Identities=18% Similarity=0.179 Sum_probs=137.7
Q ss_pred eeEEeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhh---hHhhhhhcCCeEEc-C--CCCeeecCCCCCC
Q 042005 88 DQYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSF---GAGTMMELGPFRVN-K--DGKTLYQNEYAWN 161 (432)
Q Consensus 88 ~~ysGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl---~~G~f~E~GP~~~~-~--~~~~l~~N~~SW~ 161 (432)
....+|++++ + +++++.|. -+++.|+|+.|-|=|=.+=. .+..|.--| +++- . .|...+..|-.-
T Consensus 21 ~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~~~la~~~-~rviA~DlrGyG~Sd~P~~~- 91 (322)
T KOG4178|consen 21 AISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQIPGLASRG-YRVIAPDLRGYGFSDAPPHI- 91 (322)
T ss_pred hcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhhhhhhhcc-eEEEecCCCCCCCCCCCCCc-
Confidence 4557888875 2 88888887 67899999999998855432 124455556 6653 2 232233333110
Q ss_pred CCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 162 KDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 162 ~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
...+-...+.|+..+|. . +......+.|++||+. +|-++...-...-+--+++++... ||..+|.
T Consensus 92 ---~~Yt~~~l~~di~~lld----~---Lg~~k~~lvgHDwGai----vaw~la~~~Perv~~lv~~nv~~~-~p~~~~~ 156 (322)
T KOG4178|consen 92 ---SEYTIDELVGDIVALLD----H---LGLKKAFLVGHDWGAI----VAWRLALFYPERVDGLVTLNVPFP-NPKLKPL 156 (322)
T ss_pred ---ceeeHHHHHHHHHHHHH----H---hccceeEEEeccchhH----HHHHHHHhChhhcceEEEecCCCC-Ccccchh
Confidence 11233455555555444 2 3356899999999995 555554443221112344444444 6666665
Q ss_pred ccch-----hhHHHHHhcCCCCHHHHHh----HhhhcccccC--------C-CChHHHHHHHHHHHH---------hcCC
Q 042005 242 TMMK-----GTVDFYWTHALMPDEIYHG----LTSSYNFASL--------N-SSDKVCLEFIDQGDA---------AAGN 294 (432)
Q Consensus 242 ~~~~-----~~~~~~~~~glI~~~~~~~----~~~~C~~~~~--------~-~~~~~C~~~~~~~~~---------~~g~ 294 (432)
.... ++..+.++.....+..+.. +...|..... . .....|-...+.+.. .+|.
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 4332 2222333333333332211 1122322110 0 000112111111110 0122
Q ss_pred CcccccCCCcCCCCCCcCCCCcCccccc-cccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCC
Q 042005 295 IYSYDIYAPLCNSSSKFNTEIANSGEIN-RNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPV 373 (432)
Q Consensus 295 ~n~Ydi~~~~c~~~~~~~~pYLN~~~~~-~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~ 373 (432)
+|.| ..+ .+|. . .+ ..+.+-.++|+++.|++|.++++..-....+.
T Consensus 237 lNyy---------------------rn~~r~w~-a----~~--~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk----- 283 (322)
T KOG4178|consen 237 LNYY---------------------RNFRRNWE-A----AP--WALAKITIPVLFIWGDLDPVLPYPIFGELYRK----- 283 (322)
T ss_pred chhh---------------------HHHhhCch-h----cc--ccccccccceEEEEecCcccccchhHHHHHHH-----
Confidence 2222 111 2331 0 00 01222248999999999999999833333322
Q ss_pred CccceeeeecCeeeeEEEEecce-EEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 374 RTAWYPWYTQGEVGGYAVGYQNL-TFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 374 ~~~~~~w~~~~~~~G~~k~~~nL-Tf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
...++ .-+++.++||.+++++|++..+++..|++.
T Consensus 284 ------------------~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 284 ------------------DVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ------------------hhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 12333 447889999999999999999999999964
No 29
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.94 E-value=0.00042 Score=66.87 Aligned_cols=60 Identities=17% Similarity=0.280 Sum_probs=49.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.++|....++..+.+ .+.+++.+. +|||.+.++|+...+.+.+
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~------------------------~~~~~~~i~-~gH~~~~e~p~~~~~~i~~ 261 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRI------------------------PNAELHIID-DGHLFLITRAEAVAPIIMK 261 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhC------------------------CCCEEEEEc-CCCchhhccHHHHHHHHHH
Confidence 589999999999999987766665553 245666775 5999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+.+.
T Consensus 262 fl~~~ 266 (276)
T TIGR02240 262 FLAEE 266 (276)
T ss_pred HHHHh
Confidence 99753
No 30
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.93 E-value=0.00091 Score=67.12 Aligned_cols=59 Identities=22% Similarity=0.347 Sum_probs=47.7
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+-.++||+.+|+.|.++|.... +.+ +++.++..+.++||+...++|+...+.|
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~----~~l-----------------------~~~~~~~~~~~~gH~~~~e~p~~~~~~i 364 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHA----QGL-----------------------PDGVAVHVLPGAGHMPQMEAAADVNRLL 364 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHH----hhc-----------------------cCCCeEEEeCCCCCChhhhCHHHHHHHH
Confidence 3368999999999999986432 111 1356778999999999999999999999
Q ss_pred HHHHcC
Q 042005 421 SSFING 426 (432)
Q Consensus 421 ~~fl~~ 426 (432)
.+|+.+
T Consensus 365 ~~fl~~ 370 (371)
T PRK14875 365 AEFLGK 370 (371)
T ss_pred HHHhcc
Confidence 999965
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.87 E-value=0.0018 Score=59.63 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=44.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|..|..++-. .+.+.+. .++.+++++.++||+++.++|+...+.|.
T Consensus 193 ~~~P~l~i~g~~D~~~~~~-~~~~~~~------------------------~~~~~~~~~~~~gH~~~~e~~~~~~~~i~ 247 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQI-AKEMQKL------------------------LPNLTLVIIANAGHNIHLENPEAFAKILL 247 (251)
T ss_pred CCCceEEEeeCcchHHHHH-HHHHHhc------------------------CCCCcEEEEcCCCCCcCccChHHHHHHHH
Confidence 3589999999999765321 1222111 23567889999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|++
T Consensus 248 ~~l~ 251 (251)
T TIGR03695 248 AFLE 251 (251)
T ss_pred HHhC
Confidence 9984
No 32
>PLN02578 hydrolase
Probab=97.84 E-value=0.0019 Score=65.12 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|+.|.+++....+++.+.+ .+..++.+ ++||+.+.++|++..+.|.+
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~------------------------p~a~l~~i-~~GH~~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFY------------------------PDTTLVNL-QAGHCPHDEVPEQVNKALLE 350 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC------------------------CCCEEEEe-CCCCCccccCHHHHHHHHHH
Confidence 589999999999999887666655443 24456667 79999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 351 fl~~ 354 (354)
T PLN02578 351 WLSS 354 (354)
T ss_pred HHhC
Confidence 9853
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=97.82 E-value=0.0048 Score=61.48 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
.++|||.+|+.|.+++..+++.+.+.++=. |. ...+.+++.+.||||++..++| +.+++-
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~---------------~~--~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~ 321 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAA---------------GH--PCEGGKPLVIKGAYHEILFEKDAMRSVALNA 321 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhc---------------CC--CCCCceEEEeCCCcchhhhCCcHHHHHHHHH
Confidence 589999999999999999988888776410 10 0124567899999999999887 456666
Q ss_pred HHHHHcCC
Q 042005 420 FSSFINGT 427 (432)
Q Consensus 420 ~~~fl~~~ 427 (432)
+..|+...
T Consensus 322 i~~fl~~~ 329 (330)
T PRK10749 322 IVDFFNRH 329 (330)
T ss_pred HHHHHhhc
Confidence 77787653
No 34
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.79 E-value=0.0038 Score=65.42 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=54.7
Q ss_pred HHHHHH-cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc-cCh
Q 042005 336 IQELMA-EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS-YQP 413 (432)
Q Consensus 336 l~~LL~-~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~-dqP 413 (432)
+..+++ -.++|||.+|+.|.++|....+...+.+. +-.++.+.+|||+.+. ++|
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP------------------------~a~l~vI~~aGH~~~v~e~p 465 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP------------------------RARVKVIDDKDHITIVVGRQ 465 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC------------------------CCEEEEeCCCCCcchhhcCH
Confidence 444553 36899999999999999988777666653 4567899999999996 999
Q ss_pred HHHHHHHHHHHcC
Q 042005 414 ARALVLFSSFING 426 (432)
Q Consensus 414 ~~a~~m~~~fl~~ 426 (432)
+...+.++.|...
T Consensus 466 ~~fa~~L~~F~~~ 478 (481)
T PLN03087 466 KEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999854
No 35
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.78 E-value=0.0017 Score=66.29 Aligned_cols=58 Identities=19% Similarity=0.071 Sum_probs=49.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++|||..|+.|.+++....+.+.+.. +.++++|.+|||+++.++|++..+.|.+
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~-------------------------~a~l~vIp~aGH~~~~E~Pe~v~~~I~~ 379 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS-------------------------QHKLIELPMAGHHVQEDCGEELGGIISG 379 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc-------------------------CCeEEEECCCCCCcchhCHHHHHHHHHH
Confidence 589999999999999887766655532 3467899999999999999999999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|+.
T Consensus 380 Fl~ 382 (383)
T PLN03084 380 ILS 382 (383)
T ss_pred Hhh
Confidence 985
No 36
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.50 E-value=0.0032 Score=75.45 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=51.0
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeE-EEEecceEEEEEcCCcccccccChHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGY-AVGYQNLTFVTVRGAGHFVPSYQPARALVL 419 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~-~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m 419 (432)
+-..++|+..|+.|.+++ ...+++.+.+. +...+. -...++..++.|.+|||+++.++|+...+.
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~-------------~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~ 1631 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIG-------------KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRA 1631 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHcc-------------ccccccccccccceEEEEECCCCCchHHHCHHHHHHH
Confidence 335899999999999875 33344444442 000000 001223578999999999999999999999
Q ss_pred HHHHHcCCC
Q 042005 420 FSSFINGTL 428 (432)
Q Consensus 420 ~~~fl~~~~ 428 (432)
+.+|+.+..
T Consensus 1632 I~~FL~~~~ 1640 (1655)
T PLN02980 1632 LRKFLTRLH 1640 (1655)
T ss_pred HHHHHHhcc
Confidence 999997644
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.47 E-value=0.017 Score=56.72 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=35.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
.+++||.+|+.|.+||....+.+.+++. +..++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP------------------------EAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC------------------------CCEEEEECCCCCCCC
Confidence 4899999999999999987777666643 456788999999974
No 38
>PLN02511 hydrolase
Probab=97.42 E-value=0.0053 Score=62.79 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=43.8
Q ss_pred CCeEEEEecCCccccCchhHH-HHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH------
Q 042005 343 GIRIWVYSGDTDGALPVTCTR-YAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR------ 415 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~-~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~------ 415 (432)
.+++||.+|+.|.++|..... ..++. ..+..++++.++||+...++|+.
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~------------------------~p~~~l~~~~~gGH~~~~E~p~~~~~~~w 353 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKA------------------------NPNCLLIVTPSGGHLGWVAGPEAPFGAPW 353 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhc------------------------CCCEEEEECCCcceeccccCCCCCCCCcc
Confidence 589999999999999975432 12221 24788899999999999999864
Q ss_pred HHHHHHHHHc
Q 042005 416 ALVLFSSFIN 425 (432)
Q Consensus 416 a~~m~~~fl~ 425 (432)
+.+.+.+|+.
T Consensus 354 ~~~~i~~Fl~ 363 (388)
T PLN02511 354 TDPVVMEFLE 363 (388)
T ss_pred HHHHHHHHHH
Confidence 3566666663
No 39
>PRK10985 putative hydrolase; Provisional
Probab=97.34 E-value=0.017 Score=57.38 Aligned_cols=46 Identities=11% Similarity=0.017 Sum_probs=35.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
.+++|+.+|+.|.+++....+... ++ ..+++++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPE-SL-----------------------PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHH-Hh-----------------------CCCeEEEECCCCCceeeCCC
Confidence 589999999999999876544432 21 24678899999999988764
No 40
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.33 E-value=0.0049 Score=57.10 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=93.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhhHH
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGTVD 249 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~ 249 (432)
....+|+..+++...++. ..-...++|+|.|||| ++|..+..+.. -.++.++.++|++|+.........
T Consensus 42 ~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG----~~a~~~~~~~~------~~f~a~v~~~g~~d~~~~~~~~~~ 110 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGG----YLALLAATQHP------DRFKAAVAGAGVSDLFSYYGTTDI 110 (213)
T ss_dssp HHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHH----HHHHHHHHHTC------CGSSEEEEESE-SSTTCSBHHTCC
T ss_pred ccchhhHHHHHHHHhccc-cccceeEEEEcccccc----cccchhhcccc------eeeeeeeccceecchhcccccccc
Confidence 356777777776665554 5566789999999999 56665555432 247899999999988755432100
Q ss_pred HHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccccCC
Q 042005 250 FYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWKDKP 329 (432)
Q Consensus 250 ~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~d~~ 329 (432)
+... ........ ....... ..... ++-..
T Consensus 111 ------------~~~~-~~~~~~~~-~~~~~~~---~~~s~-------~~~~~--------------------------- 139 (213)
T PF00326_consen 111 ------------YTKA-EYLEYGDP-WDNPEFY---RELSP-------ISPAD--------------------------- 139 (213)
T ss_dssp ------------HHHG-HHHHHSST-TTSHHHH---HHHHH-------GGGGG---------------------------
T ss_pred ------------cccc-cccccCcc-chhhhhh---hhhcc-------ccccc---------------------------
Confidence 1110 00000000 0011111 11100 00000
Q ss_pred CCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccc
Q 042005 330 QTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVP 409 (432)
Q Consensus 330 ~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP 409 (432)
.+. ...+|||.+|+.|.+||...++.+.+.|.-.+ ....+++..++||-..
T Consensus 140 --------~~~-~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g--------------------~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 140 --------NVQ-IKPPVLIIHGENDPRVPPSQSLRLYNALRKAG--------------------KPVELLIFPGEGHGFG 190 (213)
T ss_dssp --------GCG-GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTT--------------------SSEEEEEETT-SSSTT
T ss_pred --------ccc-CCCCEEEEccCCCCccCHHHHHHHHHHHHhcC--------------------CCEEEEEcCcCCCCCC
Confidence 000 24899999999999999999999999886222 2478899999999555
Q ss_pred ccC-hHHHHHHHHHHH
Q 042005 410 SYQ-PARALVLFSSFI 424 (432)
Q Consensus 410 ~dq-P~~a~~m~~~fl 424 (432)
.++ .....+.+.+|+
T Consensus 191 ~~~~~~~~~~~~~~f~ 206 (213)
T PF00326_consen 191 NPENRRDWYERILDFF 206 (213)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHH
Confidence 332 224455555555
No 41
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.32 E-value=0.074 Score=51.50 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=47.9
Q ss_pred HHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc-cccChH
Q 042005 336 IQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV-PSYQPA 414 (432)
Q Consensus 336 l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv-P~dqP~ 414 (432)
.+.|.+-+.++|+..|+.|... ..+.+.+.-. ..|+.- -...+.+++++.+|||.+ ..+.++
T Consensus 200 ~~~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~~----------l~~~~v~~~~~~~~~H~l~~e~~~~ 262 (274)
T TIGR03100 200 KAGLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRGA----------LEDPGIERVEIDGADHTFSDRVWRE 262 (274)
T ss_pred HHHHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHHH----------hhcCCeEEEecCCCCcccccHHHHH
Confidence 3444455799999999999873 2333322100 000000 012578899999999999 666679
Q ss_pred HHHHHHHHHHc
Q 042005 415 RALVLFSSFIN 425 (432)
Q Consensus 415 ~a~~m~~~fl~ 425 (432)
...+.+.+|+.
T Consensus 263 ~v~~~i~~wL~ 273 (274)
T TIGR03100 263 WVAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHHh
Confidence 99999999985
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.32 E-value=0.0061 Score=60.93 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=51.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccC-hHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQ-PARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dq-P~~a~~m~~ 421 (432)
.+++|+.+|+.|.+++..+++.+.+++. ..+-++..+.+++|++..+. ++.+++-+.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~----------------------~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~ 327 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLS----------------------ISNKELHTLEDMDHVITIEPGNEEVLKKII 327 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhcc----------------------CCCcEEEEECCCCCCCccCCCHHHHHHHHH
Confidence 5899999999999999999988887753 12346678899999999985 688888899
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.||.+
T Consensus 328 ~wL~~ 332 (332)
T TIGR01607 328 EWISN 332 (332)
T ss_pred HHhhC
Confidence 99864
No 43
>PLN02442 S-formylglutathione hydrolase
Probab=97.31 E-value=0.018 Score=56.18 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=68.4
Q ss_pred CceEEEEEE-EcCCCCCCCCeEEEEcCCCChhhh----h-HhhhhhcCCeE-EcCCCC----eeecCCCCCCCC-----C
Q 042005 101 GRSLFYYFV-ESPQNSSSKPLVLWLNGGPGFSSF----G-AGTMMELGPFR-VNKDGK----TLYQNEYAWNKD-----Y 164 (432)
Q Consensus 101 ~~~lFywf~-es~~~p~~~PlilWlnGGPGcSSl----~-~G~f~E~GP~~-~~~~~~----~l~~N~~SW~~~-----~ 164 (432)
++.+-|..+ +...+....|+|+.|.|++|.-.. . +..+....++. +-+|.. ....+..+|+.+ |
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 455666544 433334568999999999886421 0 01333344554 344421 111123344331 1
Q ss_pred cccCC---------hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 165 KVNGD---------IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 165 ~~~~~---------~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
..... +...+++...+..++. .+...+++|+|.|+|| +.|..+..+.. -.+++++..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~---~~~~~~~~i~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~ 175 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFD---QLDTSRASIFGHSMGG----HGALTIYLKNP------DKYKSVSAFA 175 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHH---hcCCCceEEEEEChhH----HHHHHHHHhCc------hhEEEEEEEC
Confidence 10000 1123344444444443 3445678999999999 56655555542 2478899999
Q ss_pred cccccc
Q 042005 236 ALIDLE 241 (432)
Q Consensus 236 g~idp~ 241 (432)
|..++.
T Consensus 176 ~~~~~~ 181 (283)
T PLN02442 176 PIANPI 181 (283)
T ss_pred CccCcc
Confidence 988754
No 44
>PRK10566 esterase; Provisional
Probab=97.23 E-value=0.023 Score=53.69 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=46.4
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.+|+.|.++|...++++.+.++=.+. ..++++.+..++||.+. | ..++-+.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~ 243 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVA 243 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHH
Confidence 36999999999999999999888887751111 12478899999999975 3 45666667
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
||.+
T Consensus 244 fl~~ 247 (249)
T PRK10566 244 FFRQ 247 (249)
T ss_pred HHHh
Confidence 7653
No 45
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.22 E-value=0.013 Score=57.91 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=107.4
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc-ch-
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM-MK- 245 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~-~~- 245 (432)
+.+.+-..|++-+.+|.... .+ .+.+|.|+|+|| +||..-..+.. -.++-++|.+||--|... ..
T Consensus 138 d~~~~e~~fvesiE~WR~~~-~L--~KmilvGHSfGG----YLaa~YAlKyP------erV~kLiLvsP~Gf~~~~~~~~ 204 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKM-GL--EKMILVGHSFGG----YLAAKYALKYP------ERVEKLILVSPWGFPEKPDSEP 204 (365)
T ss_pred CcccchHHHHHHHHHHHHHc-CC--cceeEeeccchH----HHHHHHHHhCh------HhhceEEEecccccccCCCcch
Confidence 33445558899999999876 33 479999999999 66655544442 248889999999766532 10
Q ss_pred --hhHHHHHh--cC--CCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccC---CCcCCCCCCcCCC-C
Q 042005 246 --GTVDFYWT--HA--LMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIY---APLCNSSSKFNTE-I 315 (432)
Q Consensus 246 --~~~~~~~~--~g--lI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~---~~~c~~~~~~~~p-Y 315 (432)
.-....|. .. +.....+..++-.- .-....|....-.......+.-..|+. ...|......++. +
T Consensus 205 ~~~~~~~~w~~~~~~~~~~~nPl~~LR~~G-----p~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~f 279 (365)
T KOG4409|consen 205 EFTKPPPEWYKALFLVATNFNPLALLRLMG-----PLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAF 279 (365)
T ss_pred hhcCCChHHHhhhhhhhhcCCHHHHHHhcc-----ccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHH
Confidence 00011111 10 00111111111000 012223332221111111111111110 0012110000000 0
Q ss_pred cCccccccccccCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecc
Q 042005 316 ANSGEINRNWKDKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQN 395 (432)
Q Consensus 316 LN~~~~~~~w~d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~n 395 (432)
-|.-+ -..|. -+++...+..| ++.++|++..|+.|.+--..|.+ ....|. -..
T Consensus 280 k~l~~-~~g~A--r~Pm~~r~~~l-~~~~pv~fiyG~~dWmD~~~g~~-~~~~~~----------------------~~~ 332 (365)
T KOG4409|consen 280 KNLFE-PGGWA--RRPMIQRLREL-KKDVPVTFIYGDRDWMDKNAGLE-VTKSLM----------------------KEY 332 (365)
T ss_pred HHHHh-ccchh--hhhHHHHHHhh-ccCCCEEEEecCcccccchhHHH-HHHHhh----------------------ccc
Confidence 00000 01122 12333444433 34699999999999986555543 333321 123
Q ss_pred eEEEEEcCCcccccccChHHHHHHHHHHHcC
Q 042005 396 LTFVTVRGAGHFVPSYQPARALVLFSSFING 426 (432)
Q Consensus 396 LTf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 426 (432)
...+.|.+|||.|-.|+|+.--+.+..+++.
T Consensus 333 ~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 333 VEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 5679999999999999999988888887753
No 46
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.01 E-value=0.00062 Score=68.39 Aligned_cols=118 Identities=16% Similarity=0.300 Sum_probs=72.7
Q ss_pred eEEEEEEEcC--CCCCCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcC--------CCCeeecCCCCCCCCCcccC----
Q 042005 103 SLFYYFVESP--QNSSSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNK--------DGKTLYQNEYAWNKDYKVNG---- 168 (432)
Q Consensus 103 ~lFywf~es~--~~p~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~--------~~~~l~~N~~SW~~~~~~~~---- 168 (432)
.-.||++++. .+|++||+||++-|| |.+.+.=|+.+.. +..+..-= ||+-+.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvL------DYsLt~~~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVL------DYSLTSSDEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEE------eccccccccC
Confidence 3469999963 468889999999999 5555555554320 00011111 333222
Q ss_pred ChhhHHHHH---HHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 169 DIRTARDSY---TFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 169 ~~~~a~d~~---~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
+..--.|++ +..+...+.. -..++.|.|+|=||+-+-.+.+++.+.+. ..-=|++++.+||+++..
T Consensus 171 ~~~yPtQL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-----~~~Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 171 GHKYPTQLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNK-----LPYPKSAILISPWVNLVP 239 (374)
T ss_pred CCcCchHHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCC-----CCCCceeEEECCCcCCcC
Confidence 222233333 3333333222 34689999999999988888888766442 123479999999999863
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.92 E-value=0.21 Score=51.63 Aligned_cols=58 Identities=10% Similarity=-0.003 Sum_probs=45.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.++||+.+|..|.++|....+.+.+.. .+..++.+.++ |+ +++|+.+++.+.+
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~------------------------~~~~l~~i~~~-~~--~e~~~~~~~~i~~ 407 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS------------------------ADGKLLEIPFK-PV--YRNFDKALQEISD 407 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC------------------------CCCeEEEccCC-Cc--cCCHHHHHHHHHH
Confidence 479999999999999999888666543 23455777776 33 3599999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
||..+
T Consensus 408 wL~~~ 412 (414)
T PRK05077 408 WLEDR 412 (414)
T ss_pred HHHHH
Confidence 98643
No 48
>PRK10115 protease 2; Provisional
Probab=96.90 E-value=0.038 Score=60.73 Aligned_cols=137 Identities=17% Similarity=0.163 Sum_probs=79.2
Q ss_pred EEecCCCCceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeEE--cCCCCeeecCCCCCCCCC
Q 042005 94 VNVDSQDGRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFRV--NKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 94 l~v~~~~~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~~--~~~~~~l~~N~~SW~~~~ 164 (432)
+.+....|..+-.|++..+. .....|+||+.-||||.|... ...|.+.|=..+ |.-|. .----.|.+..
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs--~g~G~~w~~~g 496 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGG--GELGQQWYEDG 496 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCC--CccCHHHHHhh
Confidence 33433456677766554322 235569999999999998431 234555554332 21110 00012233311
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccccc
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETM 243 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~ 243 (432)
....-...-+|+.+...... .-.--....+.|.|-|||| .++..++.+.. =.++.++.+.|++|....
T Consensus 497 ~~~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG----~l~~~~~~~~P------dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 497 KFLKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGG----MLMGVAINQRP------ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred hhhcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHH----HHHHHHHhcCh------hheeEEEecCCchhHhhh
Confidence 00111245667776665443 3333345679999999999 67777776542 259999999999997653
No 49
>PRK11460 putative hydrolase; Provisional
Probab=96.82 E-value=0.066 Score=50.62 Aligned_cols=62 Identities=21% Similarity=0.176 Sum_probs=47.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|++.+|+.|.++|..-.++..+.|+= .| .+.++.++.++||.+..+.-+.+.+-|++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~---------------~g-----~~~~~~~~~~~gH~i~~~~~~~~~~~l~~ 207 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALIS---------------LG-----GDVTLDIVEDLGHAIDPRLMQFALDRLRY 207 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHH---------------CC-----CCeEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999998888887750 01 24678888999999976655665555555
Q ss_pred HH
Q 042005 423 FI 424 (432)
Q Consensus 423 fl 424 (432)
++
T Consensus 208 ~l 209 (232)
T PRK11460 208 TV 209 (232)
T ss_pred Hc
Confidence 55
No 50
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.74 E-value=0.0036 Score=57.56 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=49.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-..+||+.+|..|.+++....+.+.+.+ .+-++..+.++||+++.++|+...+.+.
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPYLDKLA------------------------PHSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 3589999999999999987766655543 2456788999999999999999999999
Q ss_pred HHH
Q 042005 422 SFI 424 (432)
Q Consensus 422 ~fl 424 (432)
+|+
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 51
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.66 E-value=0.0049 Score=58.53 Aligned_cols=60 Identities=17% Similarity=0.082 Sum_probs=50.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.++|||..|..|.++|....+...+.+ .+..++.+.++||+++.++|+...+.+.
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 195 VSMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------PHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred cCCCeEEEecCCCccCCHHHHHHHHHhC------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 3689999999999999887655444443 3668899999999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|-+
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 9864
No 52
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.48 E-value=0.12 Score=50.94 Aligned_cols=268 Identities=14% Similarity=0.123 Sum_probs=138.7
Q ss_pred EeeEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHh----hhhhcCCeEE--cCCCCeeecCCCCCCCCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAG----TMMELGPFRV--NKDGKTLYQNEYAWNKDY 164 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G----~f~E~GP~~~--~~~~~~l~~N~~SW~~~~ 164 (432)
.|+.... .+..++|+.+++.+++. -+|+++.|.=.++.- +- .|...|=-.+ +--|...+.. ..+..
T Consensus 11 ~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r---~~rg~ 82 (298)
T COG2267 11 EGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPR---GQRGH 82 (298)
T ss_pred cceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCC---CCcCC
Confidence 4555543 35789999998876544 899999999777664 33 3444553332 2222222221 11111
Q ss_pred cccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc--
Q 042005 165 KVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET-- 242 (432)
Q Consensus 165 ~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~-- 242 (432)
. .+-.+.-.|+..|++..-.. ....|++|.|+|-|| .||..-+.+.. -+++|+++-+|++....
T Consensus 83 ~-~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg----~Ia~~~~~~~~------~~i~~~vLssP~~~l~~~~ 148 (298)
T COG2267 83 V-DSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGG----LIALLYLARYP------PRIDGLVLSSPALGLGGAI 148 (298)
T ss_pred c-hhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHH----HHHHHHHHhCC------ccccEEEEECccccCChhH
Confidence 1 11123333444444433332 346799999999999 67766666542 58999999999998774
Q ss_pred cchhhHH-HHHhcCCCCHHH-HHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccc
Q 042005 243 MMKGTVD-FYWTHALMPDEI-YHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGE 320 (432)
Q Consensus 243 ~~~~~~~-~~~~~glI~~~~-~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~ 320 (432)
....... .+...+-+-+.. ... . . .. .....+. ..|...+.. +. .||.+.-..
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~-~-~-~~----~~~~~~~-----------sr~~~~~~~--~~-----~dP~~~~~~ 203 (298)
T COG2267 149 LRLILARLALKLLGRIRPKLPVDS-N-L-LE----GVLTDDL-----------SRDPAEVAA--YE-----ADPLIGVGG 203 (298)
T ss_pred HHHHHHHHhcccccccccccccCc-c-c-cc----CcCcchh-----------hcCHHHHHH--Hh-----cCCccccCC
Confidence 1110000 000011010000 000 0 0 00 0000000 000000000 00 011100000
Q ss_pred cccccccCCCCc--HHHHHHHHHcCCeEEEEecCCccccC-chhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceE
Q 042005 321 INRNWKDKPQTV--LPIIQELMAEGIRIWVYSGDTDGALP-VTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLT 397 (432)
Q Consensus 321 ~~~~w~d~~~~~--~~~l~~LL~~girVLIy~Gd~D~i~n-~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLT 397 (432)
....|.+..... .+..+......++|||.+|..|.++. ..+..++.+++. ..+.+
T Consensus 204 ~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~----------------------~~~~~ 261 (298)
T COG2267 204 PVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAG----------------------SPDKE 261 (298)
T ss_pred ccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcC----------------------CCCce
Confidence 001121110000 11222233346999999999999999 688888888865 23467
Q ss_pred EEEEcCCcccccccCh---HHHHHHHHHHHcCC
Q 042005 398 FVTVRGAGHFVPSYQP---ARALVLFSSFINGT 427 (432)
Q Consensus 398 f~~V~~AGHmvP~dqP---~~a~~m~~~fl~~~ 427 (432)
++.+.||-|.+-.+.+ +++++-+..|+...
T Consensus 262 ~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 262 LKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred EEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 8999999999988765 47888888888554
No 53
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.42 E-value=0.044 Score=50.85 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=57.4
Q ss_pred CCCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCCCee--ecCCCCCCCCCcccCChhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDGKTL--YQNEYAWNKDYKVNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~~~l--~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~ 185 (432)
.+..|+||+|.|+++.++. +. ++.+.|=..+-++.... ..+.+.|-.............++..++....+
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 3568999999999976553 22 22233323333332111 11123332211001112233444444444444
Q ss_pred HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 186 RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++ .....+++|+|.|.|| .+|..+..... -.++++++..|.
T Consensus 89 ~~-~id~~~i~l~G~S~Gg----~~a~~~a~~~p------~~~~~~~~~~g~ 129 (212)
T TIGR01840 89 NY-SIDPNRVYVTGLSAGG----GMTAVLGCTYP------DVFAGGASNAGL 129 (212)
T ss_pred hc-CcChhheEEEEECHHH----HHHHHHHHhCc------hhheEEEeecCC
Confidence 44 3445689999999999 55665554432 236677666655
No 54
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.33 E-value=0.0054 Score=61.42 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.++|....+...+.+. .+-.++++.+ |||+++.++|++..+++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~ 333 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PRGSLRVLRSPYGHDAFLKETDRIDAILT 333 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CCCeEEEEeCCccHHHHhcCHHHHHHHHH
Confidence 4799999999999999887777777652 2456788874 999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 334 ~FL~~ 338 (343)
T PRK08775 334 TALRS 338 (343)
T ss_pred HHHHh
Confidence 99964
No 55
>PRK07581 hypothetical protein; Validated
Probab=96.24 E-value=0.01 Score=59.14 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~~ 421 (432)
.++||+..|+.|.++|....+.+.+.+. +.++++|.+ |||+++.+||+....+++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~ 330 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFID 330 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHH
Confidence 5899999999999999988777766653 456788998 999999999999999999
Q ss_pred HHHc
Q 042005 422 SFIN 425 (432)
Q Consensus 422 ~fl~ 425 (432)
+|+.
T Consensus 331 ~~~~ 334 (339)
T PRK07581 331 AALK 334 (339)
T ss_pred HHHH
Confidence 9984
No 56
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.14 E-value=1 Score=43.96 Aligned_cols=121 Identities=19% Similarity=0.272 Sum_probs=74.9
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChh-------hhhHhhhhhcCCeEEcCCCCeeecCCCCCCC-----CCcc--
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFS-------SFGAGTMMELGPFRVNKDGKTLYQNEYAWNK-----DYKV-- 166 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcS-------Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~-----~~~~-- 166 (432)
+...-||++.-..-++.+||||-|-|+=|.. .++ .+..+.|=..+-+|+. +-+||. .+..
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d-~lAd~~gFlV~yPdg~-----~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWD-ALADREGFLVAYPDGY-----DRAWNANGCGNWFGPAD 117 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchh-hhhcccCcEEECcCcc-----ccccCCCcccccCCccc
Confidence 4677889887777778889999999987643 343 4455555555555553 456655 1111
Q ss_pred -cCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 167 -NGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 167 -~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
..+.+.+..+.+.......+| ......+||+|-|-|| .+|.++.-.-. --+.++++..|..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG----~Ma~~lac~~p------~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGG----RMANRLACEYP------DIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHH----HHHHHHHhcCc------ccccceeeeeccc
Confidence 123334444444444444555 4566789999999999 55655544321 2367777766665
No 57
>PLN02965 Probable pheophorbidase
Probab=96.00 E-value=0.015 Score=55.35 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=51.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.+++|+..|..|.++|....+...+.+. +-+++.+.+|||++..++|++..+++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 35899999999999999976666665543 456788999999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+..
T Consensus 248 ~~~~~ 252 (255)
T PLN02965 248 QAVSS 252 (255)
T ss_pred HHHHH
Confidence 99853
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.89 E-value=0.017 Score=57.57 Aligned_cols=61 Identities=30% Similarity=0.431 Sum_probs=52.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|||..|+.|.++|....+...+.+ .|..+..|.+|||.+..++|++....+..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~ 319 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRS 319 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHH
Confidence 378999999999999998555555543 48899999999999999999999999999
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
|+.+.
T Consensus 320 Fi~~~ 324 (326)
T KOG1454|consen 320 FIARL 324 (326)
T ss_pred HHHHh
Confidence 99653
No 59
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=95.67 E-value=0.16 Score=49.18 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=67.6
Q ss_pred ceEEEEEE-EcCCCCCCCCeEEEEcCCCChhhhhH------hhhh-hcCCeEEcCCCC----eeecCCCCCCCC-----C
Q 042005 102 RSLFYYFV-ESPQNSSSKPLVLWLNGGPGFSSFGA------GTMM-ELGPFRVNKDGK----TLYQNEYAWNKD-----Y 164 (432)
Q Consensus 102 ~~lFywf~-es~~~p~~~PlilWlnGGPGcSSl~~------G~f~-E~GP~~~~~~~~----~l~~N~~SW~~~-----~ 164 (432)
..+-|..+ +...+.+..|+|++|.|+++.... + -.+. +.|=-.+-+|.. .....+..|+.+ |
T Consensus 25 ~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~-~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~ 103 (275)
T TIGR02821 25 VPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHEN-FMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFY 103 (275)
T ss_pred CceEEEEEcCCCccCCCCCEEEEccCCCCCccH-HHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccc
Confidence 44555544 433234567999999999876542 2 1233 344333444431 111122445431 1
Q ss_pred cccC------ChhhHHHHHHHHHHHHHH-CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 165 KVNG------DIRTARDSYTFLVSWLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 165 ~~~~------~~~~a~d~~~fL~~F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
...+ .......+.+.|..+.+. ++ ....+++|+|.|+|| ++|..+..+.. -.+++++..+|+
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG----~~a~~~a~~~p------~~~~~~~~~~~~ 172 (275)
T TIGR02821 104 VDATEEPWSQHYRMYSYIVQELPALVAAQFP-LDGERQGITGHSMGG----HGALVIALKNP------DRFKSVSAFAPI 172 (275)
T ss_pred ccCCcCcccccchHHHHHHHHHHHHHHhhCC-CCCCceEEEEEChhH----HHHHHHHHhCc------ccceEEEEECCc
Confidence 1000 001122233444444444 43 455689999999999 56666655442 246888888888
Q ss_pred ccc
Q 042005 238 IDL 240 (432)
Q Consensus 238 idp 240 (432)
.++
T Consensus 173 ~~~ 175 (275)
T TIGR02821 173 VAP 175 (275)
T ss_pred cCc
Confidence 775
No 60
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.57 E-value=0.049 Score=44.78 Aligned_cols=65 Identities=25% Similarity=0.242 Sum_probs=55.5
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+||+.++..|.++|+.+.+...+.|. +-..+++.++||-+-...-.-+.+++.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~~ 89 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVDD 89 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------CceEEEEeccCcceecCCChHHHHHHHH
Confidence 3899999999999999999999998875 3366999999999986555677899999
Q ss_pred HHcCCCCCC
Q 042005 423 FINGTLPPP 431 (432)
Q Consensus 423 fl~~~~~~~ 431 (432)
|+..-.+|+
T Consensus 90 yl~~G~lP~ 98 (103)
T PF08386_consen 90 YLLDGTLPA 98 (103)
T ss_pred HHHcCCCCC
Confidence 998877775
No 61
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.13 E-value=0.038 Score=56.24 Aligned_cols=64 Identities=20% Similarity=0.172 Sum_probs=51.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc-CCcccccccChHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR-GAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~-~AGHmvP~dqP~~a~~m~~ 421 (432)
..+|||..|+.|.++|....++..+.+. +. -...+++.+. ++||+.+.++|++..+.+.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~-----------------~a---~~~~~l~~i~~~~GH~~~le~p~~~~~~L~ 368 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL-----------------AA---GADVSYAEIDSPYGHDAFLLDDPRYGRLVR 368 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH-----------------hc---CCCeEEEEeCCCCCchhHhcCHHHHHHHHH
Confidence 5899999999999999988777666653 00 0124678886 9999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
+|+.+
T Consensus 369 ~FL~~ 373 (379)
T PRK00175 369 AFLER 373 (379)
T ss_pred HHHHh
Confidence 99965
No 62
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.04 E-value=0.069 Score=54.65 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=53.4
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC-CcccccccChHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG-AGHFVPSYQPARALVLF 420 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~-AGHmvP~dqP~~a~~m~ 420 (432)
-..+||+..|+.|.++|....++..+.+.= .-.+.++..|.+ +||+.+.++|+...+.+
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~--------------------~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQK--------------------QGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhh--------------------cCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 368999999999999998777766666530 002578889985 99999999999999999
Q ss_pred HHHHcCC
Q 042005 421 SSFINGT 427 (432)
Q Consensus 421 ~~fl~~~ 427 (432)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
No 63
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.85 E-value=0.66 Score=45.74 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=45.7
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
...+||+..|-.+--++..-..+.... +.+.-+..+.+|||+|..|+|+...+++.
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FPNVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------------------------ccchheeecccCCceeecCCHHHHHHHHH
Confidence 346888888888877776544444333 23456677788999999999999999999
Q ss_pred HHHcC
Q 042005 422 SFING 426 (432)
Q Consensus 422 ~fl~~ 426 (432)
.|+..
T Consensus 308 ~Fl~~ 312 (315)
T KOG2382|consen 308 EFLEE 312 (315)
T ss_pred HHhcc
Confidence 98853
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.84 E-value=0.21 Score=48.16 Aligned_cols=104 Identities=18% Similarity=0.242 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhh----hcCCeEEcCCCCeeecCCCCCCC--CCcccCChhhHHHHHHHHHHHHHHCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMM----ELGPFRVNKDGKTLYQNEYAWNK--DYKVNGDIRTARDSYTFLVSWLARFPE 189 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~----E~GP~~~~~~~~~l~~N~~SW~~--~~~~~~~~~~a~d~~~fL~~F~~~fP~ 189 (432)
..-|+++.+.|| |.|.|+++.|. +.=-|++- .+..+-|.=++ +...-+-+..++|+...++++|..-|
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~el~s~~~~r~~----a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~- 145 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASELKSKIRCRCL----ALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP- 145 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHHHHhhcceeEE----EeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-
Confidence 355999999998 99998877764 22233330 11122222222 00112446788999999998884432
Q ss_pred CCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 190 YKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 190 ~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.++.|.|+|.|| +||.+-...+ .--+|-|+.+.+=+
T Consensus 146 ---~~iilVGHSmGG----aIav~~a~~k-----~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 146 ---PQIILVGHSMGG----AIAVHTAASK-----TLPSLAGLVVIDVV 181 (343)
T ss_pred ---CceEEEeccccc----hhhhhhhhhh-----hchhhhceEEEEEe
Confidence 369999999999 5664433332 23468888766533
No 65
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=94.79 E-value=0.044 Score=55.03 Aligned_cols=62 Identities=21% Similarity=0.198 Sum_probs=50.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEec-ceEEEEEc-CCcccccccChHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQ-NLTFVTVR-GAGHFVPSYQPARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~-nLTf~~V~-~AGHmvP~dqP~~a~~m~ 420 (432)
..+||+..|+.|.++|....+...+.+. ... ..+|+.|. +|||+++.++|+...+.|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~---------------------~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP---------------------AAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh---------------------hcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 5899999999999999988887777654 001 13555664 899999999999999999
Q ss_pred HHHHc
Q 042005 421 SSFIN 425 (432)
Q Consensus 421 ~~fl~ 425 (432)
.+|++
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 66
>PRK06489 hypothetical protein; Provisional
Probab=94.78 E-value=0.086 Score=53.12 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=47.7
Q ss_pred CCeEEEEecCCccccCchhH--HHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCC----cccccccChHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCT--RYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGA----GHFVPSYQPARA 416 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt--~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~A----GHmvP~dqP~~a 416 (432)
..+|||.+|+.|.++|.... +...+.+ .+-.+++|.+| ||++. ++|+..
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i------------------------p~a~l~~i~~a~~~~GH~~~-e~P~~~ 346 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV------------------------KHGRLVLIPASPETRGHGTT-GSAKFW 346 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC------------------------cCCeEEEECCCCCCCCcccc-cCHHHH
Confidence 58999999999999987654 3333343 34577999996 99985 899999
Q ss_pred HHHHHHHHcCC
Q 042005 417 LVLFSSFINGT 427 (432)
Q Consensus 417 ~~m~~~fl~~~ 427 (432)
.+.+.+|+...
T Consensus 347 ~~~i~~FL~~~ 357 (360)
T PRK06489 347 KAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHhc
Confidence 99999999643
No 67
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=93.45 E-value=3 Score=44.51 Aligned_cols=49 Identities=14% Similarity=0.260 Sum_probs=38.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR 415 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~ 415 (432)
.++||+..|..|.++|+..++...+.+. +-...++.++||+++..+|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~------------------------~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG------------------------GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC------------------------CCEEEEECCCCCchHhhCCCC
Confidence 5899999999999999998887776653 223357889999998887743
No 68
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=92.31 E-value=0.31 Score=44.40 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=48.2
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFS 421 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~ 421 (432)
-.+++|+.+|..|.++|........+.+. +-.++.+.++||....+.|+..-+++.
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 46999999999999999988888555543 567899999999999999999888875
No 69
>PLN00021 chlorophyllase
Probab=91.96 E-value=1.1 Score=44.50 Aligned_cols=119 Identities=21% Similarity=0.193 Sum_probs=65.2
Q ss_pred EEEEcCCCCCCCCeEEEEcCCCChhhhh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHH
Q 042005 107 YFVESPQNSSSKPLVLWLNGGPGFSSFG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSW 183 (432)
Q Consensus 107 wf~es~~~p~~~PlilWlnGGPGcSSl~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F 183 (432)
.+.++. ..+.|+||++.|+.+.+..- ...|.+.|=..+-.|-...... +. ..+.+.+.++..++.+-
T Consensus 43 v~~P~~--~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~------~~--~~~i~d~~~~~~~l~~~ 112 (313)
T PLN00021 43 VATPSE--AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGP------DG--TDEIKDAAAVINWLSSG 112 (313)
T ss_pred EEeCCC--CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCC------Cc--hhhHHHHHHHHHHHHhh
Confidence 444442 35689999999998766541 1333556744444442211110 11 12333456666666654
Q ss_pred HHH-CC---CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 184 LAR-FP---EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 184 ~~~-fP---~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
++. .| +....+++|+|+|.||..+-.+|. +... ......+++++..+|+...
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~----~~~~-~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALAL----GKAA-VSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHh----hccc-cccccceeeEEeecccccc
Confidence 432 12 233467999999999954444443 3221 0112568888888887543
No 70
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=91.62 E-value=4.1 Score=40.85 Aligned_cols=137 Identities=17% Similarity=0.147 Sum_probs=79.2
Q ss_pred EeeEEecCCCCceEEEEEEEcCCC-C-CCCCeEEEEcCCCChhhhh-----Hhhhhh----cCCeEEcCCCCeeec-CCC
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQN-S-SSKPLVLWLNGGPGFSSFG-----AGTMME----LGPFRVNKDGKTLYQ-NEY 158 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~~-p-~~~PlilWlnGGPGcSSl~-----~G~f~E----~GP~~~~~~~~~l~~-N~~ 158 (432)
+.=++++ ....++-+.|..... + ..+|+||++-||=-|-+.. -.++.. .+=..+..| .++.+ ++
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVd-YRLAPEh~- 138 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVD-YRLAPEHP- 138 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecC-cccCCCCC-
Confidence 3444444 346799998877653 3 5899999999997665420 022222 222222222 11111 01
Q ss_pred CCCCCCcccCChhhHHHHHHHHHH-HHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 159 AWNKDYKVNGDIRTARDSYTFLVS-WLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 159 SW~~~~~~~~~~~~a~d~~~fL~~-F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++. .=++.-..+..++++ |.+..-..+ .++|+|.|=||..+-.+|+++.+.. ...+.|+|+++.-|+
T Consensus 139 -----~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 139 -----FPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPF 206 (336)
T ss_pred -----CCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecc
Confidence 111 112222223334444 666554443 3999999999988888888777653 135889999999888
Q ss_pred cccccc
Q 042005 238 IDLETM 243 (432)
Q Consensus 238 idp~~~ 243 (432)
..-...
T Consensus 207 ~~~~~~ 212 (336)
T KOG1515|consen 207 FQGTDR 212 (336)
T ss_pred cCCCCC
Confidence 766543
No 71
>PRK10162 acetyl esterase; Provisional
Probab=90.99 E-value=0.44 Score=47.24 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCC---Chhh----hhHhhhhh-cCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCC
Q 042005 117 SKPLVLWLNGGP---GFSS----FGAGTMME-LGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFP 188 (432)
Q Consensus 117 ~~PlilWlnGGP---GcSS----l~~G~f~E-~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP 188 (432)
..|+|||+-||. |... + ...|.. .|=..+..| ..+.+. + .+. ...+.+.+.++++.+.-+.+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~-~~~la~~~g~~Vv~vd-Yrlape-~----~~p--~~~~D~~~a~~~l~~~~~~~- 149 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRI-MRLLASYSGCTVIGID-YTLSPE-A----RFP--QAIEEIVAVCCYFHQHAEDY- 149 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHH-HHHHHHHcCCEEEEec-CCCCCC-C----CCC--CcHHHHHHHHHHHHHhHHHh-
Confidence 469999999997 2211 2 133333 454333333 111110 0 121 11222333344444443333
Q ss_pred CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 189 EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 189 ~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.....++.|+|+|.||+.+-.+|..+.+.. .....++++++..|++|.
T Consensus 150 ~~d~~~i~l~G~SaGG~la~~~a~~~~~~~----~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 150 GINMSRIGFAGDSAGAMLALASALWLRDKQ----IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred CCChhHEEEEEECHHHHHHHHHHHHHHhcC----CCccChhheEEECCccCC
Confidence 234567999999999977766665553332 112468899999998874
No 72
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=90.83 E-value=2.6 Score=40.67 Aligned_cols=60 Identities=8% Similarity=-0.066 Sum_probs=48.7
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++++..|..|.++|..-.+++++.+. +-.++++. +||+.+..+|+...++|.+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------PSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------ccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 4799999999999999987777776643 12456674 9999999999999999998
Q ss_pred HHcCC
Q 042005 423 FINGT 427 (432)
Q Consensus 423 fl~~~ 427 (432)
.....
T Consensus 266 ~a~~~ 270 (273)
T PLN02211 266 AAASV 270 (273)
T ss_pred HHHHh
Confidence 87543
No 73
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=90.03 E-value=4.3 Score=39.76 Aligned_cols=122 Identities=21% Similarity=0.156 Sum_probs=76.5
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh-----hhHhhhhhcCCeE--EcCCCCeeecCCCCCCCCCcccCChhh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS-----FGAGTMMELGPFR--VNKDGKTLYQNEYAWNKDYKVNGDIRT 172 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS-----l~~G~f~E~GP~~--~~~~~~~l~~N~~SW~~~~~~~~~~~~ 172 (432)
.+..||.-.......++.+-+|+.+-|.=+-|| . ...|..+|=-. ++..|...+.--. .| ..+-+.+
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~-a~~l~~~g~~v~a~D~~GhG~SdGl~----~y-i~~~d~~ 109 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQST-AKRLAKSGFAVYAIDYEGHGRSDGLH----AY-VPSFDLV 109 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHH-HHHHHhCCCeEEEeeccCCCcCCCCc----cc-CCcHHHH
Confidence 367888877765554566678888887655442 3 25666666433 3332211111000 13 2356678
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.+|...|+..+-. ..++++.|.|++|||-|| ++|..+..+. +--..|+++..|+.
T Consensus 110 v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~------p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 110 VDDVISFFDSIKE-REENKGLPRFLFGESMGG----AVALLIALKD------PNFWDGAILVAPMC 164 (313)
T ss_pred HHHHHHHHHHHhh-ccccCCCCeeeeecCcch----HHHHHHHhhC------Ccccccceeeeccc
Confidence 8888777776544 458999999999999999 7777776653 23467777777764
No 74
>PRK05855 short chain dehydrogenase; Validated
Probab=89.59 E-value=0.39 Score=51.09 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=44.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
.+++||.+|+.|.++|....+.+.+. ..+..++++ .+||+++.+.|+...+.+.+
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------------------------~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~ 287 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------------------------VPRLWRREI-KAGHWLPMSHPQVLAAAVAE 287 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------------------------CCcceEEEc-cCCCcchhhChhHHHHHHHH
Confidence 48999999999999997544333221 123444555 57999999999999999999
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+..
T Consensus 288 fl~~ 291 (582)
T PRK05855 288 FVDA 291 (582)
T ss_pred HHHh
Confidence 9964
No 75
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=89.18 E-value=1.9 Score=47.96 Aligned_cols=224 Identities=16% Similarity=0.170 Sum_probs=123.6
Q ss_pred CceEEEEEEEcCC--CCCCCCeEEEEcCCCChhhh------h--HhhhhhcCCeEEcCCCCeeecCCCCCCC---CCccc
Q 042005 101 GRSLFYYFVESPQ--NSSSKPLVLWLNGGPGFSSF------G--AGTMMELGPFRVNKDGKTLYQNEYAWNK---DYKVN 167 (432)
Q Consensus 101 ~~~lFywf~es~~--~p~~~PlilWlnGGPGcSSl------~--~G~f~E~GP~~~~~~~~~l~~N~~SW~~---~~~~~ 167 (432)
+-.+.+++.-.++ +.++-||+++.-|||++-+. + ..++...|...+.-|+.... .+.|.- -+..-
T Consensus 507 ~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~--~~G~~~~~~~~~~l 584 (755)
T KOG2100|consen 507 GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSG--GYGWDFRSALPRNL 584 (755)
T ss_pred cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcC--CcchhHHHHhhhhc
Confidence 3456677665543 33567999999999982111 1 12344456655443331111 111111 01111
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchh
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKG 246 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~ 246 (432)
++ ...+|.....+.+.+.+ +.. ..+.|+|-|||| +++..++.+..+ --+|--+-.+|++|...-...
T Consensus 585 G~-~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGG----y~t~~~l~~~~~-----~~fkcgvavaPVtd~~~yds~ 652 (755)
T KOG2100|consen 585 GD-VEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGG----YLTLKLLESDPG-----DVFKCGVAVAPVTDWLYYDST 652 (755)
T ss_pred CC-cchHHHHHHHHHHHhcc--cccHHHeEEeccChHH----HHHHHHhhhCcC-----ceEEEEEEecceeeeeeeccc
Confidence 22 23445556666666555 444 469999999999 899998887531 345665777888876521111
Q ss_pred hHHHHHhcCCCCHHHHHhHhhhcccccCCCChHHHHHHHHHHHHhcCCCcccccCCCcCCCCCCcCCCCcCccccccccc
Q 042005 247 TVDFYWTHALMPDEIYHGLTSSYNFASLNSSDKVCLEFIDQGDAAAGNIYSYDIYAPLCNSSSKFNTEIANSGEINRNWK 326 (432)
Q Consensus 247 ~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~g~~n~Ydi~~~~c~~~~~~~~pYLN~~~~~~~w~ 326 (432)
+.+ ..+|+-.+ ..+. |.-..
T Consensus 653 ~te--rymg~p~~-------------------~~~~---------------y~e~~------------------------ 672 (755)
T KOG2100|consen 653 YTE--RYMGLPSE-------------------NDKG---------------YEESS------------------------ 672 (755)
T ss_pred ccH--hhcCCCcc-------------------ccch---------------hhhcc------------------------
Confidence 100 00221111 0110 10000
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcc
Q 042005 327 DKPQTVLPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGH 406 (432)
Q Consensus 327 d~~~~~~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGH 406 (432)
....+..+ ++.+.|+.+|..|..+.+..+..++++|.-.|.. +..++..+..|
T Consensus 673 -----~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~--------------------~~~~vypde~H 725 (755)
T KOG2100|consen 673 -----VSSPANNI--KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP--------------------FRLLVYPDENH 725 (755)
T ss_pred -----ccchhhhh--ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc--------------------eEEEEeCCCCc
Confidence 00111111 1356899999999999999999999999744443 44466777778
Q ss_pred cccccCh-HHHHHHHHHHHc
Q 042005 407 FVPSYQP-ARALVLFSSFIN 425 (432)
Q Consensus 407 mvP~dqP-~~a~~m~~~fl~ 425 (432)
-+-.-.+ ...+..+.+|+.
T Consensus 726 ~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 726 GISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred ccccccchHHHHHHHHHHHH
Confidence 7755443 456677777775
No 76
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=88.74 E-value=3.6 Score=39.81 Aligned_cols=123 Identities=10% Similarity=0.011 Sum_probs=65.3
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCC---hhh-hhH----hhhhhcCCeEEcCC--CCeeecCCCCCCCCCcccCCh
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPG---FSS-FGA----GTMMELGPFRVNKD--GKTLYQNEYAWNKDYKVNGDI 170 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPG---cSS-l~~----G~f~E~GP~~~~~~--~~~l~~N~~SW~~~~~~~~~~ 170 (432)
..++|.|+++.... ..+|+||.+.|-.+ ++. + + -.|.+.|=-.+..| |..-+..+. ...+-.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~-~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~------~~~~~~ 80 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRM-VALQARAFAAGGFGVLQIDLYGCGDSAGDF------AAARWD 80 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHH-HHHHHHHHHHCCCEEEEECCCCCCCCCCcc------ccCCHH
Confidence 45689998876532 33699999998643 222 1 1 23445563222222 211111111 011112
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccch
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMK 245 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~ 245 (432)
...+|+..+ .+|++.. ...+++|.|+|.||..+-.+| .+. .-.++++++-+|.++-.....
T Consensus 81 ~~~~Dv~~a-i~~L~~~---~~~~v~LvG~SmGG~vAl~~A----~~~------p~~v~~lVL~~P~~~g~~~l~ 141 (266)
T TIGR03101 81 VWKEDVAAA-YRWLIEQ---GHPPVTLWGLRLGALLALDAA----NPL------AAKCNRLVLWQPVVSGKQQLQ 141 (266)
T ss_pred HHHHHHHHH-HHHHHhc---CCCCEEEEEECHHHHHHHHHH----HhC------ccccceEEEeccccchHHHHH
Confidence 334554443 3344433 236899999999995444333 322 235788999999887654433
No 77
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.63 E-value=1.1 Score=43.19 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCChhhhhHhhh----hhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTM----MELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK 191 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f----~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~ 191 (432)
.+.|.||++.|..+.++. +.-+ .+-| |++- .+...-+..+... ......-++..+.+.++++....
T Consensus 16 ~~~p~vvliHG~~~~~~~-w~~~~~~L~~~g-~~vi----~~dl~g~G~s~~~--~~~~~~~~~~~~~l~~~i~~l~~-- 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWC-WYKIRCLMENSG-YKVT----CIDLKSAGIDQSD--ADSVTTFDEYNKPLIDFLSSLPE-- 85 (273)
T ss_pred CCCCeEEEECCCCCCcCc-HHHHHHHHHhCC-CEEE----EecccCCCCCCCC--cccCCCHHHHHHHHHHHHHhcCC--
Confidence 567999999998777765 4332 2234 3221 0111111111100 00011222333445555554322
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
..+++|.|+||||. ++.....+.. -.++++++.++..
T Consensus 86 ~~~v~lvGhS~GG~----v~~~~a~~~p------~~v~~lv~~~~~~ 122 (273)
T PLN02211 86 NEKVILVGHSAGGL----SVTQAIHRFP------KKICLAVYVAATM 122 (273)
T ss_pred CCCEEEEEECchHH----HHHHHHHhCh------hheeEEEEecccc
Confidence 46899999999995 4444433321 2467777776653
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=87.64 E-value=5.7 Score=38.33 Aligned_cols=115 Identities=14% Similarity=0.280 Sum_probs=71.7
Q ss_pred CCeEEEEcCCCChhhhhHhhhh----hc-CC-eEEc---CCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCC
Q 042005 118 KPLVLWLNGGPGFSSFGAGTMM----EL-GP-FRVN---KDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFP 188 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~~G~f~----E~-GP-~~~~---~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP 188 (432)
+++++|+-|=||.... |--|. |. +| +.+- --|.....+.-...++....+-++-.+.-++|++++....+
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 5899999999998886 44443 22 32 3321 11111111110000111223556666777888998887653
Q ss_pred CCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 189 EYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 189 ~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
..+.+++|.|+|=|+ +++.+|+++.. ....+++++.+-=|.+...
T Consensus 81 -~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 81 -KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred -CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCccccc
Confidence 246789999999999 99999999875 1356777777776766443
No 79
>PLN02872 triacylglycerol lipase
Probab=87.08 E-value=1.4 Score=45.23 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=49.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc---ccccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF---VPSYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm---vP~dqP~~a~~m 419 (432)
.++|+|+.|+.|.+++....+++.+.|. . ...+..+.++||+ ...+.|+..++-
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp-------------~----------~~~l~~l~~~gH~dfi~~~eape~V~~~ 381 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP-------------S----------KPELLYLENYGHIDFLLSTSAKEDVYNH 381 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC-------------C----------ccEEEEcCCCCCHHHHhCcchHHHHHHH
Confidence 4799999999999999999888888875 0 0234677999996 455889999999
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+.+
T Consensus 382 Il~fL~~ 388 (395)
T PLN02872 382 MIQFFRS 388 (395)
T ss_pred HHHHHHH
Confidence 9999864
No 80
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=86.94 E-value=1.2 Score=37.67 Aligned_cols=43 Identities=26% Similarity=0.378 Sum_probs=34.3
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF 407 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm 407 (432)
..++|++.+|+.|.+++....+...++++ ..-+++.+.|++|+
T Consensus 103 ~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 103 IRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp TTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SSEEEEEETTS-TT
T ss_pred cCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CCcEEEEeCCCcCc
Confidence 35799999999999999988888888875 23467999999996
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=86.76 E-value=7.1 Score=41.80 Aligned_cols=124 Identities=20% Similarity=0.184 Sum_probs=66.2
Q ss_pred CCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh----hh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhh
Q 042005 100 DGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS----FG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRT 172 (432)
Q Consensus 100 ~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS----l~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~ 172 (432)
.+..|+...+.-.. ....|+||.+.|--..+. .. .-.|.+.|=-.+..|-...-..... +...+ ...
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~----~~~~~-~~~ 78 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGE----FDLLG-SDE 78 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCc----eEecC-ccc
Confidence 35678876664332 346799999987544332 10 0123344433222221100000000 01111 346
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
++|+.+++. |+.+.|. .+.++.++|.||||. +|..+.... .-.||+++..+++.|..
T Consensus 79 ~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~----~a~~~a~~~------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 79 AADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAV----TQLLAAVLQ------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred chHHHHHHH-HHHhCCC-CCCcEEEEEeChHHH----HHHHHhccC------CCceeEEeecCcccchh
Confidence 667666555 6666653 346899999999994 444443332 23699999988887643
No 82
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=86.71 E-value=1.6 Score=42.84 Aligned_cols=68 Identities=22% Similarity=0.375 Sum_probs=51.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEe-cceEEEEEcCCccccc--ccChHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGY-QNLTFVTVRGAGHFVP--SYQPARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~-~nLTf~~V~~AGHmvP--~dqP~~a~~m 419 (432)
+.+|+||+|..|-++|+..++..++++- +.. .+++|.++.+++|+.. ...|. ++.-
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c--------------------~~G~a~V~~~~~~~~~H~~~~~~~~~~-a~~W 277 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC--------------------AAGGADVEYVRYPGGGHLGAAFASAPD-ALAW 277 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH--------------------HcCCCCEEEEecCCCChhhhhhcCcHH-HHHH
Confidence 5899999999999999999999998863 112 2688999999999975 45654 4555
Q ss_pred HHHHHcCCCCCC
Q 042005 420 FSSFINGTLPPP 431 (432)
Q Consensus 420 ~~~fl~~~~~~~ 431 (432)
|++-+.|++.++
T Consensus 278 l~~rf~G~~~~~ 289 (290)
T PF03583_consen 278 LDDRFAGKPATS 289 (290)
T ss_pred HHHHHCCCCCCC
Confidence 666666777653
No 83
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.07 E-value=2.2 Score=38.35 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=45.1
Q ss_pred HcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHH
Q 042005 341 AEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLF 420 (432)
Q Consensus 341 ~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~ 420 (432)
+...++++..|+.|.+.+......+...+.. ...++++.++||+...++|+...+.+
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPN-----------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-----------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 3469999999999966665443444444330 36778999999999999999777777
Q ss_pred HHHH
Q 042005 421 SSFI 424 (432)
Q Consensus 421 ~~fl 424 (432)
..|+
T Consensus 276 ~~~~ 279 (282)
T COG0596 276 LAFL 279 (282)
T ss_pred HHHH
Confidence 6644
No 84
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=84.79 E-value=4.9 Score=42.13 Aligned_cols=88 Identities=23% Similarity=0.341 Sum_probs=45.5
Q ss_pred CCCCCeEEEEcCCC---Chhhh--hHhhhhhcCCeEEcCCCCeeecCCCCCCCCC--cccCC--hhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGP---GFSSF--GAGTMMELGPFRVNKDGKTLYQNEYAWNKDY--KVNGD--IRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGP---GcSSl--~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~--~~~~~--~~~a~d~~~fL~~F~~ 185 (432)
.++.||+||+-||+ |.++. .-.+..+.+++.+-.=. ....+..+-... ..... -......++++++-.+
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~--yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~ 169 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSIN--YRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEec--ccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 35679999999997 32221 11233333334432111 111222222100 00011 1234445677777777
Q ss_pred HCCCCCCCCeEEEccccccc
Q 042005 186 RFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~ 205 (432)
.|. -..+++.|+|+|.||+
T Consensus 170 ~fg-gd~~~v~~~G~SaG~~ 188 (493)
T cd00312 170 AFG-GDPDSVTIFGESAGGA 188 (493)
T ss_pred HhC-CCcceEEEEeecHHHH
Confidence 773 4557899999999995
No 85
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.74 E-value=2.2 Score=44.89 Aligned_cols=85 Identities=24% Similarity=0.320 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeE-EEEecceEEEEEcCCcccc--c
Q 042005 333 LPIIQELMAEGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGY-AVGYQNLTFVTVRGAGHFV--P 409 (432)
Q Consensus 333 ~~~l~~LL~~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~-~k~~~nLTf~~V~~AGHmv--P 409 (432)
-+.|....++|=|+|+|||..|.+++..+|.++-+++. ...+|- ...-+-+-|..|.|.||-. |
T Consensus 343 ~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~-------------~~~g~~~~~v~dF~RlF~vPGm~HC~gG~ 409 (474)
T PF07519_consen 343 DPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVV-------------ARMGGALADVDDFYRLFMVPGMGHCGGGP 409 (474)
T ss_pred CcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHH-------------HhcccccccccceeEEEecCCCcccCCCC
Confidence 35677777889999999999999999999999998874 122222 1111224568999999986 4
Q ss_pred ccChHHHHHHHHHHHcCCCCC
Q 042005 410 SYQPARALVLFSSFINGTLPP 430 (432)
Q Consensus 410 ~dqP~~a~~m~~~fl~~~~~~ 430 (432)
-..|-.++..|.+|+.+-.=|
T Consensus 410 g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 410 GPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CCCCCCHHHHHHHHHhCCCCC
Confidence 456778899999999764433
No 86
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.67 E-value=1 Score=41.77 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=40.6
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|++.+|+.|.++|....+...+.|+= .| .+++|.+..+.||-++ ...++.+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~---------------~~-----~~v~~~~~~g~gH~i~----~~~~~~~~~ 210 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA---------------AG-----ANVEFHEYPGGGHEIS----PEELRDLRE 210 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC---------------TT------GEEEEEETT-SSS------HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh---------------cC-----CCEEEEEcCCCCCCCC----HHHHHHHHH
Confidence 58999999999999999888777776640 00 2588899999999996 455566777
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
||.
T Consensus 211 ~l~ 213 (216)
T PF02230_consen 211 FLE 213 (216)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 87
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=84.57 E-value=5 Score=39.96 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
.+.|+++.++|+. . .. .+.+.|.|.|+|| .+|..+..+.. -.++++++.++...
T Consensus 121 ~~~a~dl~~ll~~----l-~l-~~~~~lvG~SmGG----~vA~~~A~~~P------~~V~~LvLi~s~~~ 174 (343)
T PRK08775 121 ADQADAIALLLDA----L-GI-ARLHAFVGYSYGA----LVGLQFASRHP------ARVRTLVVVSGAHR 174 (343)
T ss_pred HHHHHHHHHHHHH----c-CC-CcceEEEEECHHH----HHHHHHHHHCh------HhhheEEEECcccc
Confidence 3456666665553 2 22 2346799999999 56666655432 25888988887543
No 88
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=84.34 E-value=10 Score=42.44 Aligned_cols=29 Identities=14% Similarity=-0.077 Sum_probs=25.5
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcC
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLG 370 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~ 370 (432)
-.++||+.+|..|..++..++.++.++|.
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 35899999999999999999888888875
No 89
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.27 E-value=6 Score=36.55 Aligned_cols=117 Identities=22% Similarity=0.231 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCCCChhhhhHhhhhhc---CC-eEE-cCCCCe---eecCCC---CCCCCC--ccc--CChhhHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAGTMMEL---GP-FRV-NKDGKT---LYQNEY---AWNKDY--KVN--GDIRTARDSYTF 179 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G~f~E~---GP-~~~-~~~~~~---l~~N~~---SW~~~~--~~~--~~~~~a~d~~~f 179 (432)
.+.+|+||||-|= |.+.-.+..+.+. -| ..+ -+.++. .....+ +|=... ... .+.+..++..+.
T Consensus 11 ~~~~~lvi~LHG~-G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--T-TS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 4577999999986 6666434555551 12 222 222221 112334 775511 111 133333334444
Q ss_pred HHHHHHHC--CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 180 LVSWLARF--PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 180 L~~F~~~f--P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
|.+|++.- -....++++|.|-|-|| .+|..+.-+. .-.+.|++.-+|++-+..
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa----~~al~~~l~~------p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGA----AMALYLALRY------PEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHH----HHHHHHHHCT------SSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHH----HHHHHHHHHc------CcCcCEEEEeeccccccc
Confidence 44444321 12566789999999999 6666666554 237899999999875543
No 90
>PRK10349 carboxylesterase BioH; Provisional
Probab=84.23 E-value=4.9 Score=37.78 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=25.1
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
..++++.|+|+|| .+|..+..+. .-.++++++.|+.
T Consensus 73 ~~~~~lvGhS~Gg----~ia~~~a~~~------p~~v~~lili~~~ 108 (256)
T PRK10349 73 PDKAIWLGWSLGG----LVASQIALTH------PERVQALVTVASS 108 (256)
T ss_pred CCCeEEEEECHHH----HHHHHHHHhC------hHhhheEEEecCc
Confidence 3579999999999 4555554433 2357888887763
No 91
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=84.06 E-value=13 Score=34.91 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCChhhhhHh-------hhhhcCCeEEcCCCCee--ecCCCCCCCCCcccCChhhHHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAG-------TMMELGPFRVNKDGKTL--YQNEYAWNKDYKVNGDIRTARDSYTFLVSWLAR 186 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G-------~f~E~GP~~~~~~~~~l--~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~ 186 (432)
...||||+|-|.=+...- +. +=.+.|=..+-+++..- ..+-|.|.......+ ...+. +...|.+.+..
T Consensus 14 ~~~PLVv~LHG~~~~a~~-~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g-~~d~~-~i~~lv~~v~~ 90 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAED-FAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRG-GGDVA-FIAALVDYVAA 90 (220)
T ss_pred CCCCEEEEeCCCCCCHHH-HHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccC-ccchh-hHHHHHHhHhh
Confidence 467999999998554332 11 11122322333443211 122334433211111 11222 33333444443
Q ss_pred CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 187 fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
....-.+.+|++|.|=|| .+|..|.-... =-+.++++..|..
T Consensus 91 ~~~iD~~RVyv~G~S~Gg----~ma~~la~~~p------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGG----MMANVLACAYP------DLFAAVAVVSGVP 132 (220)
T ss_pred hcccCCCceeeEEECHHH----HHHHHHHHhCC------ccceEEEeecccc
Confidence 335667889999999999 56665554432 2577888777763
No 92
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=83.63 E-value=4.6 Score=41.34 Aligned_cols=126 Identities=18% Similarity=0.256 Sum_probs=75.8
Q ss_pred EeeEEecCCCCceEEEEEEEcCC----CCCCCCeEEEEcCCCChhhhh-----HhhhhhcCCeE---EcCCC----Ceee
Q 042005 91 SGYVNVDSQDGRSLFYYFVESPQ----NSSSKPLVLWLNGGPGFSSFG-----AGTMMELGPFR---VNKDG----KTLY 154 (432)
Q Consensus 91 sGyl~v~~~~~~~lFywf~es~~----~p~~~PlilWlnGGPGcSSl~-----~G~f~E~GP~~---~~~~~----~~l~ 154 (432)
.=+|...+ .|.-..=|+..... +..++|+||-|-|=.|.|.-. ....++.| ++ +|.-| +-.+
T Consensus 95 Reii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 95 REIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred eEEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEEEECCCCCCCCccCC
Confidence 45666654 34555666654432 356789999999999988531 35567788 44 34333 1011
Q ss_pred cCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEec
Q 042005 155 QNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMG 234 (432)
Q Consensus 155 ~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IG 234 (432)
++- |. .+. .+|+-.+++---++||+ +++|.+|.|+||. .+..++-+..++ .-=..|++|-
T Consensus 173 pr~------f~-ag~---t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~---iL~nYLGE~g~~----~~l~~a~~v~ 232 (409)
T KOG1838|consen 173 PRL------FT-AGW---TEDLREVVNHIKKRYPQ---APLFAVGFSMGGN---ILTNYLGEEGDN----TPLIAAVAVC 232 (409)
T ss_pred Cce------ee-cCC---HHHHHHHHHHHHHhCCC---CceEEEEecchHH---HHHHHhhhccCC----CCceeEEEEe
Confidence 111 11 122 22333333333357875 6999999999996 567777665433 2347889999
Q ss_pred cccc
Q 042005 235 NALI 238 (432)
Q Consensus 235 Ng~i 238 (432)
|||=
T Consensus 233 ~Pwd 236 (409)
T KOG1838|consen 233 NPWD 236 (409)
T ss_pred ccch
Confidence 9983
No 93
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=83.41 E-value=2.4 Score=42.48 Aligned_cols=61 Identities=10% Similarity=0.132 Sum_probs=46.3
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh---HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP---ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP---~~a~~m 419 (432)
..+||+.+|+.|.++|....+.+.+.+. + ...++.++ .+||+.+.+.+ +.+..-
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~-----------------~-----~~~~~~~~-~~gH~~~~~~~~~~~~v~~~ 342 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS-----------------S-----EDYTELSF-PGGHIGIYVSGKAQKEVPPA 342 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC-----------------C-----CCeEEEEc-CCCCEEEEECchhHhhhhHH
Confidence 5899999999999999998888887764 0 12344444 58999998765 566777
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+..
T Consensus 343 i~~wl~~ 349 (350)
T TIGR01836 343 IGKWLQA 349 (350)
T ss_pred HHHHHHh
Confidence 7788753
No 94
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.12 E-value=10 Score=36.29 Aligned_cols=102 Identities=21% Similarity=0.490 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCCChhhhhHhhh-----hhcC---Ce-EEcCCC----CeeecCCCCC-CCCCcccCChhhHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTM-----MELG---PF-RVNKDG----KTLYQNEYAW-NKDYKVNGDIRTARDSYTFLV 181 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f-----~E~G---P~-~~~~~~----~~l~~N~~SW-~~~~~~~~~~~~a~d~~~fL~ 181 (432)
.++|+++|+-|-||-++. +--| .+.+ |+ .+.--+ +.-..+..|= |++ ..+-++..+.=++|++
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e--ifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEE--IFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCccccccccccccc--ccchhhHHHHHHHHHH
Confidence 688999999999998875 3322 2222 21 121101 0000111111 111 1123334444456776
Q ss_pred HHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEe
Q 042005 182 SWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAM 233 (432)
Q Consensus 182 ~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~I 233 (432)
++. | +++++||.|+|=|. ++..+|+..++ ...+++-..+
T Consensus 104 ~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k----~~~~vqKa~~ 142 (301)
T KOG3975|consen 104 EYV---P--KDRKIYIIGHSIGA----YMVLQILPSIK----LVFSVQKAVL 142 (301)
T ss_pred HhC---C--CCCEEEEEecchhH----HHHHHHhhhcc----cccceEEEEE
Confidence 654 3 57899999999998 88888888754 2345544443
No 95
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.05 E-value=22 Score=33.83 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=46.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|.++.|+.|.+|...-...|-+..+ +.++ ..+...|||-+.+|.+.....+.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~-l~~fdGgHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFT-LRVFDGGHFFLNQQREEVLARLEQ 231 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCce-EEEecCcceehhhhHHHHHHHHHH
Confidence 4799999999999999876666655422 2344 566778999999999999998888
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
.+.
T Consensus 232 ~l~ 234 (244)
T COG3208 232 HLA 234 (244)
T ss_pred Hhh
Confidence 874
No 96
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=82.99 E-value=2.2 Score=36.21 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
...+.+.+.|++..+.+| +..+.|+|+|-||-.+-.+|..+.++... ...+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 445567777788777777 46899999999998888888877765432 2467888888888774
No 97
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=81.79 E-value=3.6 Score=37.28 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=39.9
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.+.-..+++.+.+..+.++.+. .++++.|+|||| .++........ -.++++++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~l~~---~~~~~vG~S~Gg----~~~~~~a~~~p------~~v~~lvl~~~~ 78 (230)
T PF00561_consen 22 FPDYTTDDLAADLEALREALGI---KKINLVGHSMGG----MLALEYAAQYP------ERVKKLVLISPP 78 (230)
T ss_dssp SCTHCHHHHHHHHHHHHHHHTT---SSEEEEEETHHH----HHHHHHHHHSG------GGEEEEEEESES
T ss_pred cccccHHHHHHHHHHHHHHhCC---CCeEEEEECCCh----HHHHHHHHHCc------hhhcCcEEEeee
Confidence 3445566677777777776642 349999999999 55555555542 279999988885
No 98
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=81.13 E-value=2.1 Score=39.03 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHHHH---CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLAR---FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~---fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
...+|..++++-..+. + ++...+++|+|+|=||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 4455555544443332 3 355678999999999988888886666553 2349999999998877
No 99
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=81.02 E-value=1.7 Score=40.11 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=56.1
Q ss_pred eEEEEcCCCChhhhhHhhhhhcCC--eEE---cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCC
Q 042005 120 LVLWLNGGPGFSSFGAGTMMELGP--FRV---NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRD 194 (432)
Q Consensus 120 lilWlnGGPGcSSl~~G~f~E~GP--~~~---~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~ 194 (432)
-|+++-+|=|.++.=..+-..+++ +.+ ...+. . .......+-++.|+...+.|+ +..|+ -|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~-------~-~~~~~~~si~~la~~y~~~I~---~~~~~---gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGR-------G-DDEPPPDSIEELASRYAEAIR---ARQPE---GP 67 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTS-------C-TTSHEESSHHHHHHHHHHHHH---HHTSS---SS
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCC-------C-CCCCCCCCHHHHHHHHHHHhh---hhCCC---CC
Confidence 366777776655541244444555 333 22211 0 011111244566666666554 33442 39
Q ss_pred eEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 195 FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 195 ~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++|+|.|+||..+=.+|+++.++. ...+.|++.++.
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~ 103 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSP 103 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCS
T ss_pred eeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCC
Confidence 999999999987777777776653 468888888854
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=80.45 E-value=2.4 Score=39.51 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=42.1
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+|++.+|..|.+||..-+++..+.|.=.| .+..+..+. .||.++.+-=+ .+++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g--------------------~~v~~~~~~-~GH~i~~e~~~----~~~~ 200 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASG--------------------ADVEVRWHE-GGHEIPPEELE----AARS 200 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcC--------------------CCEEEEEec-CCCcCCHHHHH----HHHH
Confidence 6899999999999999999988887775111 134445555 99999865444 4445
Q ss_pred HHcC
Q 042005 423 FING 426 (432)
Q Consensus 423 fl~~ 426 (432)
|+.+
T Consensus 201 wl~~ 204 (207)
T COG0400 201 WLAN 204 (207)
T ss_pred HHHh
Confidence 6543
No 101
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=80.31 E-value=5.5 Score=33.42 Aligned_cols=90 Identities=21% Similarity=0.236 Sum_probs=49.1
Q ss_pred eEEEEcCCCChhhhhHhh----hhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCe
Q 042005 120 LVLWLNGGPGFSSFGAGT----MMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDF 195 (432)
Q Consensus 120 lilWlnGGPGcSSl~~G~----f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~ 195 (432)
+||++.|+-|.+.. +.. |.+.|=..+..+. ...++.....+.-+++...-+..+ ...++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEALAEQGYAVVAFDY--------------PGHGDSDGADAVERVLADIRAGYP--DPDRI 63 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHHHHHTTEEEEEESC--------------TTSTTSHHSHHHHHHHHHHHHHHC--TCCEE
T ss_pred CEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEEec--------------CCCCccchhHHHHHHHHHHHhhcC--CCCcE
Confidence 58999999876554 333 3344443333221 111111112222233332223333 45789
Q ss_pred EEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 196 FIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 196 yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
+++|.|.||. +|..+...+ -.++++++-+|+
T Consensus 64 ~l~G~S~Gg~----~a~~~~~~~-------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 64 ILIGHSMGGA----IAANLAARN-------PRVKAVVLLSPY 94 (145)
T ss_dssp EEEEETHHHH----HHHHHHHHS-------TTESEEEEESES
T ss_pred EEEEEccCcH----HHHHHhhhc-------cceeEEEEecCc
Confidence 9999999995 444444443 368888888885
No 102
>PLN02454 triacylglycerol lipase
Probab=80.26 E-value=3.8 Score=42.09 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
..+.+++...+++..+++|..+ ..++++|||-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 4678889999999999998764 3699999999996555555555543211 124567788888888765
No 103
>PRK13604 luxD acyl transferase; Provisional
Probab=77.96 E-value=4.3 Score=40.11 Aligned_cols=46 Identities=9% Similarity=0.152 Sum_probs=39.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccc
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPS 410 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~ 410 (432)
..+||+++|+.|..||..+.+...++++ .++-.+..+.||+|....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------SEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------cCCcEEEEeCCCccccCc
Confidence 4899999999999999999999998864 135678999999999754
No 104
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=77.67 E-value=62 Score=32.15 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=65.8
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhh--HhhhhhcCCeEEc--CCCCe-eecCCCCCCC----CCcccCC--
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFG--AGTMMELGPFRVN--KDGKT-LYQNEYAWNK----DYKVNGD-- 169 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~--~G~f~E~GP~~~~--~~~~~-l~~N~~SW~~----~~~~~~~-- 169 (432)
+..++=|++.-++....-|.||-+.|..|.+... .-.|...|=..+. .-|.. ....+..... ++...+-
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~ 145 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDD 145 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccC
Confidence 4566666665443457789999999998876531 1235566755443 22211 1222222221 1111111
Q ss_pred ---h----hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 170 ---I----RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 170 ---~----~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
+ .+..|.+.+ ..|+...|+.-.+.+.++|+|-|| .+|.....-. -.++.++...|+...
T Consensus 146 ~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG----~lal~~aaLd-------~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGG----GLALAAAALD-------PRVKAAAADVPFLCD 211 (320)
T ss_dssp -TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHH----HHHHHHHHHS-------ST-SEEEEESESSSS
T ss_pred chHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCch----HHHHHHHHhC-------ccccEEEecCCCccc
Confidence 1 122333332 346678899988999999999999 4444333322 248888888777643
No 105
>PLN02965 Probable pheophorbidase
Probab=75.94 E-value=5.4 Score=37.65 Aligned_cols=52 Identities=13% Similarity=0.167 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++.|+|+.+++. ... ..+++++.|+|+||..+..+| .+.. -.++++++.++.
T Consensus 55 ~~~a~dl~~~l~----~l~--~~~~~~lvGhSmGG~ia~~~a----~~~p------~~v~~lvl~~~~ 106 (255)
T PLN02965 55 DQYNRPLFALLS----DLP--PDHKVILVGHSIGGGSVTEAL----CKFT------DKISMAIYVAAA 106 (255)
T ss_pred HHHHHHHHHHHH----hcC--CCCCEEEEecCcchHHHHHHH----HhCc------hheeEEEEEccc
Confidence 345555555544 331 125899999999995444444 3332 246788887764
No 106
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=75.92 E-value=4.9 Score=37.38 Aligned_cols=41 Identities=22% Similarity=0.295 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNN 218 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n 218 (432)
+-.|+.+++..|++.++ ++|||.|+|+|=|+ .+..+|++..
T Consensus 76 ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs----~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN--NGRPFILAGHSQGS----MHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEEeChHH----HHHHHHHHHH
Confidence 34567888899998885 47999999999999 5566666553
No 107
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.97 E-value=7.1 Score=33.87 Aligned_cols=60 Identities=18% Similarity=0.167 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 172 TARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 172 ~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
+++++...+++..+.+| ..+++|+|+|-||..+-.+|..+.++.. .-..+-+..|.|-+.
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~~ 69 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCccc
Confidence 34445555555555555 4579999999999877777777655421 123455555555543
No 108
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.79 E-value=4 Score=39.63 Aligned_cols=103 Identities=16% Similarity=0.136 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCCChh-hhhH----hhhhhcCCeEE---cCCCCeeecCCCCCCCCCc--ccCChhhHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFS-SFGA----GTMMELGPFRV---NKDGKTLYQNEYAWNKDYK--VNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 116 ~~~PlilWlnGGPGcS-Sl~~----G~f~E~GP~~~---~~~~~~l~~N~~SW~~~~~--~~~~~~~a~d~~~fL~~F~~ 185 (432)
.+.|++|++.|-.|.. .... -.+.+.+-+.+ +-.+ ++.. .|. ..+...+++++..+|+...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~-------~~~~-~y~~a~~~~~~v~~~la~~l~~L~~ 105 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGR-------GANP-NYPQAVNNTRVVGAELAKFLDFLVD 105 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcc-------cccc-ChHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4579999999987765 2100 12333343432 2211 1100 121 11233456677777776655
Q ss_pred HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 186 RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.. .+...+++|+|+|.||+.+-.+|.++ . -+++.|+.-+|.
T Consensus 106 ~~-g~~~~~i~lIGhSlGa~vAg~~a~~~----~------~~v~~iv~LDPa 146 (275)
T cd00707 106 NT-GLSLENVHLIGHSLGAHVAGFAGKRL----N------GKLGRITGLDPA 146 (275)
T ss_pred hc-CCChHHEEEEEecHHHHHHHHHHHHh----c------CccceeEEecCC
Confidence 43 34456899999999997666665533 1 157788777664
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.27 E-value=5.3 Score=36.54 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=34.5
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc
Q 042005 177 YTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM 244 (432)
Q Consensus 177 ~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~ 244 (432)
.+.+.+.++.. ....+.|.|-|-||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 46 ~~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 46 IAQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred HHHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 34444444433 344599999999997766666433 4555 7779999987544
No 110
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=72.63 E-value=37 Score=30.14 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCChhhhhHhhh-hhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeE
Q 042005 118 KPLVLWLNGGPGFSSFGAGTM-MELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFF 196 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~~G~f-~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~y 196 (432)
.|.++++.|+|+++.. +... ...-+.....+ ......+..+... . . ..........+..|++.+ ...++.
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~~~~~~~~~~-~~~~d~~g~g~s~-~--~-~~~~~~~~~~~~~~~~~~---~~~~~~ 91 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKVLPALAARYR-VIAPDLRGHGRSD-P--A-GYSLSAYADDLAALLDAL---GLEKVV 91 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHHhhccccceE-EEEecccCCCCCC-c--c-cccHHHHHHHHHHHHHHh---CCCceE
Confidence 5699999999999887 4552 22222110000 0111122111111 0 0 112222244455555543 223399
Q ss_pred EEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 197 IAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 197 I~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
+.|+|+|| .+|..+..... -.++++++.++...
T Consensus 92 l~G~S~Gg----~~~~~~~~~~p------~~~~~~v~~~~~~~ 124 (282)
T COG0596 92 LVGHSMGG----AVALALALRHP------DRVRGLVLIGPAPP 124 (282)
T ss_pred EEEecccH----HHHHHHHHhcc------hhhheeeEecCCCC
Confidence 99999998 45555544432 25777777776654
No 111
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=72.30 E-value=8 Score=36.05 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
++....+++..+++| +.+++++|+|-||-.+-.+|..+.++. ...+++.+..|.|-+..
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCCC
Confidence 344455555555555 457999999999977766666665543 23568889989887743
No 112
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=71.64 E-value=9.4 Score=39.02 Aligned_cols=61 Identities=18% Similarity=0.067 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
-.|.|...+|..-...||.... .|..+.|.|||| +||..+.+- .+-.+.||+=.++++-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~----yla~l~~k~------aP~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG----YLAHLCAKI------APWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH----HHHHHHHhh------CccceeEEEecCccccch
Confidence 5789999999999999999986 788999999999 666555332 134567776666665554
No 113
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=71.23 E-value=28 Score=35.22 Aligned_cols=52 Identities=15% Similarity=0.036 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCC-eEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRD-FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~-~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
+++.+.+..+++.. .-.+ .+|.|+|+||. +|..+..+. .-.++++++.|+..
T Consensus 130 ~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~----ia~~~a~~~------p~~v~~lvl~~~~~ 182 (379)
T PRK00175 130 RDWVRAQARLLDAL---GITRLAAVVGGSMGGM----QALEWAIDY------PDRVRSALVIASSA 182 (379)
T ss_pred HHHHHHHHHHHHHh---CCCCceEEEEECHHHH----HHHHHHHhC------hHhhhEEEEECCCc
Confidence 34444455555443 2245 58999999994 444444333 23588888888654
No 114
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=70.19 E-value=63 Score=31.48 Aligned_cols=115 Identities=23% Similarity=0.306 Sum_probs=64.7
Q ss_pred CCCCCCCeEEEEcCCC------Chh-hhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHH
Q 042005 113 QNSSSKPLVLWLNGGP------GFS-SFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 113 ~~p~~~PlilWlnGGP------GcS-Sl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~ 185 (432)
....+.|+||++-||= ... +.---+....|-..+..| .++.+ ++.| . ...+.+.+.+.++.+=-.
T Consensus 74 ~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vd-YrlaP-e~~~----p--~~~~d~~~a~~~l~~~~~ 145 (312)
T COG0657 74 KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVD-YRLAP-EHPF----P--AALEDAYAAYRWLRANAA 145 (312)
T ss_pred CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecC-CCCCC-CCCC----C--chHHHHHHHHHHHHhhhH
Confidence 3456789999999982 122 221123334454444433 11211 1111 1 112223333343333222
Q ss_pred HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 186 RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 186 ~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
.+ ....+.+.++|+|=||+-+-.+|...-+.. ...+++.++..|++|...
T Consensus 146 ~~-g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 146 EL-GIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred hh-CCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 23 344678999999999987777777665542 356888999999998875
No 115
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=69.71 E-value=12 Score=38.62 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=46.8
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccchhh
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMMKGT 247 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~ 247 (432)
+.+++-.|+..|++.+-.++....+.|+.++|-|||| .||..+-..-. .+ +.|..--++.+....++..|
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~kyP-----~~-~~ga~ASSapv~a~~df~~y 157 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKYP-----HL-FDGAWASSAPVQAKVDFWEY 157 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH-T-----TT--SEEEEET--CCHCCTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhCC-----Ce-eEEEEeccceeeeecccHHH
Confidence 5678999999999998878876677899999999999 78888765532 22 44555555555555444433
No 116
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=69.55 E-value=30 Score=34.43 Aligned_cols=52 Identities=17% Similarity=0.105 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCC-eEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRD-FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~-~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
+++.+.+..+.+.. .+ .+ ++|+|+|.|| .+|..+..+. .-.++++++.++..
T Consensus 110 ~~~~~~~~~~~~~l-~~--~~~~~l~G~S~Gg----~ia~~~a~~~------p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 110 RDDVKAQKLLLDHL-GI--EQIAAVVGGSMGG----MQALEWAIDY------PERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHc-CC--CCceEEEEECHHH----HHHHHHHHHC------hHhhheEEEEccCC
Confidence 33444444444433 22 34 9999999999 5555554443 23588888887754
No 117
>COG4099 Predicted peptidase [General function prediction only]
Probab=69.33 E-value=62 Score=31.98 Aligned_cols=100 Identities=20% Similarity=0.290 Sum_probs=54.3
Q ss_pred CCCceEEEEEEEcCC-CC--CCCCeEEEEcCCCChhh-hh------HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccC
Q 042005 99 QDGRSLFYYFVESPQ-NS--SSKPLVLWLNGGPGFSS-FG------AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNG 168 (432)
Q Consensus 99 ~~~~~lFywf~es~~-~p--~~~PlilWlnGGPGcSS-l~------~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~ 168 (432)
..+.+|=|-||.-.. +| +.-||||||.|+=-.++ -. .|...+-|| .++ -++.-|. |+.-+. -.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~p----edq-cfVlAPQ-y~~if~-d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGP----EDQ-CFVLAPQ-YNPIFA-DS 241 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecc----cCc-eEEEccc-cccccc-cc
Confidence 456789898886532 33 33499999999743222 10 244444443 111 1333332 443111 01
Q ss_pred Ch---hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 169 DI---RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 169 ~~---~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
|+ ..-....+.+.+=+...+..-...+|++|-|-||.
T Consensus 242 e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~ 281 (387)
T COG4099 242 EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGF 281 (387)
T ss_pred ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcch
Confidence 22 12222345555455567777788899999999994
No 118
>PLN02571 triacylglycerol lipase
Probab=67.55 E-value=13 Score=38.20 Aligned_cols=70 Identities=9% Similarity=0.066 Sum_probs=48.0
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccc----cccceeeeeeeEeccccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQH----ANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~----~~~~~inLkGi~IGNg~idp 240 (432)
..+.++++..++.+.+++|.. ..+++++|+|-||-.+-..|..|....-. .....+.+..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 356678899999999988765 34799999999997666666666543110 01123557778888877764
No 119
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=66.28 E-value=18 Score=37.67 Aligned_cols=70 Identities=16% Similarity=0.187 Sum_probs=46.5
Q ss_pred hhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHH
Q 042005 133 FGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQ 212 (432)
Q Consensus 133 l~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~ 212 (432)
+ +-.|.+.| +... ..+.--+|+|-... ..++..+++.+.+.+.++..+ .+++.|.|+|.|| .+|.
T Consensus 113 l-i~~L~~~G-Y~~~---~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGG----lva~ 177 (440)
T PLN02733 113 M-IEQLIKWG-YKEG---KTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGG----LLVK 177 (440)
T ss_pred H-HHHHHHcC-CccC---CCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhH----HHHH
Confidence 5 46677788 4432 34777889996521 123456777777887777653 5789999999999 4555
Q ss_pred HHHHh
Q 042005 213 AILYN 217 (432)
Q Consensus 213 ~I~~~ 217 (432)
..+..
T Consensus 178 ~fl~~ 182 (440)
T PLN02733 178 CFMSL 182 (440)
T ss_pred HHHHH
Confidence 44443
No 120
>PRK07581 hypothetical protein; Validated
Probab=66.06 E-value=40 Score=33.24 Aligned_cols=36 Identities=11% Similarity=-0.089 Sum_probs=23.8
Q ss_pred CC-eEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 193 RD-FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 193 ~~-~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.+ .+|+|.|+|| .+|..+..+.. =.++++++.++..
T Consensus 123 ~~~~~lvG~S~GG----~va~~~a~~~P------~~V~~Lvli~~~~ 159 (339)
T PRK07581 123 ERLALVVGWSMGA----QQTYHWAVRYP------DMVERAAPIAGTA 159 (339)
T ss_pred CceEEEEEeCHHH----HHHHHHHHHCH------HHHhhheeeecCC
Confidence 46 5799999999 55555555542 2477777766543
No 121
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=65.95 E-value=11 Score=36.18 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=43.8
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~f 423 (432)
.+|||++|..|-++|+.-..+.....+ +..-...|+||||--..--|+ -.+.+++|
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k-----------------------~~~epl~v~g~gH~~~~~~~~-yi~~l~~f 248 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCK-----------------------EKVEPLWVKGAGHNDIELYPE-YIEHLRRF 248 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhcc-----------------------ccCCCcEEecCCCcccccCHH-HHHHHHHH
Confidence 599999999999999977666555432 124567899999998877764 45566777
Q ss_pred HcC
Q 042005 424 ING 426 (432)
Q Consensus 424 l~~ 426 (432)
+..
T Consensus 249 ~~~ 251 (258)
T KOG1552|consen 249 ISS 251 (258)
T ss_pred HHH
Confidence 654
No 122
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=65.10 E-value=1e+02 Score=31.79 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=54.4
Q ss_pred CCCCCeEEEEcCCCC-----hhhhhHhhhhhcC---CeEEc-CCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHH
Q 042005 115 SSSKPLVLWLNGGPG-----FSSFGAGTMMELG---PFRVN-KDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLA 185 (432)
Q Consensus 115 p~~~PlilWlnGGPG-----cSSl~~G~f~E~G---P~~~~-~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~ 185 (432)
++..|||+.|-|+.- .... +-.+.+.| |+.+- .++. +...+..++. ....-.+.+.+=|.-|.+
T Consensus 206 ~~~~PvlyllDG~~w~~~~~~~~~-ld~li~~g~i~P~ivV~id~~----~~~~R~~el~--~~~~f~~~l~~eLlP~I~ 278 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMPVWPA-LDSLTHRGQLPPAVYLLIDAI----DTTHRSQELP--CNADFWLAVQQELLPQVR 278 (411)
T ss_pred CCCCCEEEEEECHHhhhcCCHHHH-HHHHHHcCCCCceEEEEECCC----CcccccccCC--chHHHHHHHHHHHHHHHH
Confidence 567899999999752 2223 24556666 65532 2210 1111222222 111222222222333343
Q ss_pred H-CCCCC-CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 186 R-FPEYK-TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 186 ~-fP~~~-~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
+ |+-.. .....|+|.|+|| ..|.++.-++. -.+.+++..+|.+
T Consensus 279 ~~y~~~~d~~~~~IaG~S~GG----l~AL~~al~~P------d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 279 AIAPFSDDADRTVVAGQSFGG----LAALYAGLHWP------ERFGCVLSQSGSF 323 (411)
T ss_pred HhCCCCCCccceEEEEEChHH----HHHHHHHHhCc------ccccEEEEeccce
Confidence 2 43222 2458999999999 66666655442 2466777766653
No 123
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=63.77 E-value=47 Score=33.07 Aligned_cols=52 Identities=6% Similarity=-0.040 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
+-.++....+..+ ..++++.|+|+||. ++........ -.++++++.++.++.
T Consensus 122 ~~~~v~~l~~~~~---~~~i~lvGhS~GG~----i~~~~~~~~~------~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 122 IDKCVDYICRTSK---LDQISLLGICQGGT----FSLCYAALYP------DKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHhC---CCcccEEEECHHHH----HHHHHHHhCc------hheeeEEEecccccc
Confidence 4444444444443 46899999999995 3333333322 147788877777764
No 124
>PLN02872 triacylglycerol lipase
Probab=60.92 E-value=51 Score=33.83 Aligned_cols=81 Identities=16% Similarity=0.101 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCCCChhhhhHh----------hhhhcCCeEE-cCCCCeeecCCCCCCC--------CCcccCChhhH-HH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAG----------TMMELGPFRV-NKDGKTLYQNEYAWNK--------DYKVNGDIRTA-RD 175 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G----------~f~E~GP~~~-~~~~~~l~~N~~SW~~--------~~~~~~~~~~a-~d 175 (432)
..+|.|+.+-|..++|.. +. .|.+.| |.+ -.| ..-|.+|+.+ .+...+-.+.| .|
T Consensus 72 ~~~~~Vll~HGl~~ss~~-w~~~~~~~sla~~La~~G-ydV~l~n---~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~D 146 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDA-WFLNSPEQSLGFILADHG-FDVWVGN---VRGTRWSYGHVTLSEKDKEFWDWSWQELALYD 146 (395)
T ss_pred CCCCeEEEeCcccccccc-eeecCcccchHHHHHhCC-CCccccc---ccccccccCCCCCCccchhccCCcHHHHHHHH
Confidence 457899999998877765 22 244555 222 111 1112233322 11112233555 67
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
+-+++....+.- ..++++.|+|.||.
T Consensus 147 l~a~id~i~~~~----~~~v~~VGhS~Gg~ 172 (395)
T PLN02872 147 LAEMIHYVYSIT----NSKIFIVGHSQGTI 172 (395)
T ss_pred HHHHHHHHHhcc----CCceEEEEECHHHH
Confidence 777666655432 35899999999994
No 125
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=60.02 E-value=11 Score=35.55 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=46.7
Q ss_pred CChhhHHHHHHHHHHHHHHCCCC-CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEY-KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~-~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
.|.+.|......|..|++..-+. ...+++|.++|.|+.-+-..-..+...... .+..-+|..|++.+|-+|...
T Consensus 67 ~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 67 YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 34455555555555555543333 457899999999997665555555444321 012347899999999888743
No 126
>PRK11071 esterase YqiA; Provisional
Probab=59.75 E-value=21 Score=32.45 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=43.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
..+|+|.+|+.|-++|+..+.+..++ .....+.||+|.- ...+..++.+.+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~---------------------------~~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA---------------------------CRQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh---------------------------cceEEECCCCcch--hhHHHhHHHHHH
Confidence 46899999999999999887776653 2345789999998 334888999999
Q ss_pred HHc
Q 042005 423 FIN 425 (432)
Q Consensus 423 fl~ 425 (432)
|++
T Consensus 187 fl~ 189 (190)
T PRK11071 187 FLG 189 (190)
T ss_pred Hhc
Confidence 874
No 127
>PRK05855 short chain dehydrogenase; Validated
Probab=59.46 E-value=30 Score=36.63 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=48.8
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhhc-C-CeEEcCCCCeeecCCCCCCCC---CcccCChhhHHH
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMMEL-G-PFRVNKDGKTLYQNEYAWNKD---YKVNGDIRTARD 175 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E~-G-P~~~~~~~~~l~~N~~SW~~~---~~~~~~~~~a~d 175 (432)
+..+.|+-+. +.+.|.||.+.|.++.+.. +.-+.+. . -|++- .+...-+..... ....+-++.++|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~L~~~~~Vi----~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPLLADRFRVV----AYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHHhhcceEEE----EecCCCCCCCCCCCcccccCHHHHHHH
Confidence 4667776442 2346899999999877765 3433331 1 13321 011112222210 001234566777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 176 SYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 176 ~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
+..+++.. . ...+++|.|+|+||.
T Consensus 83 l~~~i~~l-----~-~~~~~~lvGhS~Gg~ 106 (582)
T PRK05855 83 FAAVIDAV-----S-PDRPVHLLAHDWGSI 106 (582)
T ss_pred HHHHHHHh-----C-CCCcEEEEecChHHH
Confidence 77776642 1 135799999999993
No 128
>COG0400 Predicted esterase [General function prediction only]
Probab=59.28 E-value=64 Score=29.99 Aligned_cols=75 Identities=12% Similarity=0.133 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc---hhh
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM---KGT 247 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~---~~~ 247 (432)
..+..+.+||....+.+ ....+++.+.|-|-|+ .+|..+.-.. +-.++|+++-.|..-+.... ...
T Consensus 78 ~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA----~ial~~~l~~------~~~~~~ail~~g~~~~~~~~~~~~~~ 146 (207)
T COG0400 78 LETEKLAEFLEELAEEY-GIDSSRIILIGFSQGA----NIALSLGLTL------PGLFAGAILFSGMLPLEPELLPDLAG 146 (207)
T ss_pred HHHHHHHHHHHHHHHHh-CCChhheEEEecChHH----HHHHHHHHhC------chhhccchhcCCcCCCCCccccccCC
Confidence 45566778888888777 5556789999999999 4555555444 23688888888877655321 223
Q ss_pred HHHHHhcCC
Q 042005 248 VDFYWTHAL 256 (432)
Q Consensus 248 ~~~~~~~gl 256 (432)
.+.+..||-
T Consensus 147 ~pill~hG~ 155 (207)
T COG0400 147 TPILLSHGT 155 (207)
T ss_pred CeEEEeccC
Confidence 344455553
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=58.84 E-value=16 Score=33.54 Aligned_cols=104 Identities=16% Similarity=0.295 Sum_probs=70.6
Q ss_pred CCeEEEEcCCCChhhhh---HhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCC
Q 042005 118 KPLVLWLNGGPGFSSFG---AGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRD 194 (432)
Q Consensus 118 ~PlilWlnGGPGcSSl~---~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~ 194 (432)
|-++|.+.|==|-..++ -..|...|=-.+--|. -.|-|++ .+.+++|.|+-..++.+.++. +.+.
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvds-----l~Yfw~~----rtP~~~a~Dl~~~i~~y~~~w---~~~~ 69 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDS-----LRYFWSE----RTPEQTAADLARIIRHYRARW---GRKR 69 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEech-----HHHHhhh----CCHHHHHHHHHHHHHHHHHHh---CCce
Confidence 44677777766655542 1445556644443332 2355642 467899999999998888755 4678
Q ss_pred eEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 195 FFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 195 ~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
+.|.|-|+|.-.+|.+..++-..- +-.++++++-.+-..
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPSTT 108 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccCCc
Confidence 999999999999999998886554 236777776665543
No 130
>PLN02753 triacylglycerol lipase
Probab=58.49 E-value=23 Score=37.50 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=49.2
Q ss_pred CChhhHHHHHHHHHHHHHHCCC--CCCCCeEEEccccccccchHHHHHHHHhcc--ccccceeeeeeeEeccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPE--YKTRDFFIAGESYAGHYIPQLAQAILYNNQ--HANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~--~~~~~~yI~GESYaG~yvP~lA~~I~~~n~--~~~~~~inLkGi~IGNg~idp 240 (432)
+...+.+++...++...+.+|. .....++|+|+|-||-.+-..|..|.+..- ......+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3346788899999999988864 234679999999999766666666654311 001123556677777777654
No 131
>PLN02719 triacylglycerol lipase
Probab=58.09 E-value=23 Score=37.35 Aligned_cols=72 Identities=11% Similarity=0.151 Sum_probs=48.6
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCC--CCCeEEEccccccccchHHHHHHHHhccc--cccceeeeeeeEeccccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYK--TRDFFIAGESYAGHYIPQLAQAILYNNQH--ANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~--~~~~yI~GESYaG~yvP~lA~~I~~~n~~--~~~~~inLkGi~IGNg~idp 240 (432)
...+.++++..++...+.+|... ...++|+|+|-||-.+--.|..|.+..-. .....+.+.-+..|.|=+..
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 34567889999999999998653 34699999999997666666666653211 01123445667777776654
No 132
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=57.11 E-value=15 Score=38.19 Aligned_cols=58 Identities=14% Similarity=0.100 Sum_probs=37.9
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
...+|+++.++++...+.. .+.-.+++|.|+|.|||.+-.+|. .. .-.|..|.+-||.
T Consensus 96 t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~----~~------p~rV~rItgLDPA 153 (442)
T TIGR03230 96 TKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGS----LT------KHKVNRITGLDPA 153 (442)
T ss_pred HHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHH----hC------CcceeEEEEEcCC
Confidence 3567777777776554443 355578999999999975555543 21 1246777777764
No 133
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.40 E-value=26 Score=32.89 Aligned_cols=60 Identities=18% Similarity=0.297 Sum_probs=46.9
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEec-ceEEEEEcCCcccccccChH---HHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQ-NLTFVTVRGAGHFVPSYQPA---RALVL 419 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~-nLTf~~V~~AGHmvP~dqP~---~a~~m 419 (432)
.++|+.+|..|.++|..-.+....... + ......+.+++|....+.+. +++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------cCCceEEEecCCccccccCccHHHHHHHHH
Confidence 799999999999999887777776543 2 46778899999999986665 56777
Q ss_pred HHHHHcC
Q 042005 420 FSSFING 426 (432)
Q Consensus 420 ~~~fl~~ 426 (432)
+.+|+..
T Consensus 290 ~~~f~~~ 296 (299)
T COG1073 290 LAEFLER 296 (299)
T ss_pred HHHHHHH
Confidence 7777643
No 134
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=54.70 E-value=39 Score=36.70 Aligned_cols=55 Identities=18% Similarity=0.113 Sum_probs=36.5
Q ss_pred HHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 177 YTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 177 ~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
++.||-.-++. .|.. ..+-|-|-|||| +++...+.+..+ -++--+-|.|+++...
T Consensus 711 Veglq~Laeq~-gfidmdrV~vhGWSYGG----YLSlm~L~~~P~------IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 711 VEGLQMLAEQT-GFIDMDRVGVHGWSYGG----YLSLMGLAQYPN------IFRVAIAGAPVTDWRL 766 (867)
T ss_pred HHHHHHHHHhc-CcccchheeEecccccc----HHHHHHhhcCcc------eeeEEeccCcceeeee
Confidence 45555444444 2433 348999999999 888888776532 3566666888888753
No 135
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=54.00 E-value=12 Score=25.65 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=25.4
Q ss_pred cccccccccchhhHHHHHhcCCCCHHHHHhHhh
Q 042005 235 NALIDLETMMKGTVDFYWTHALMPDEIYHGLTS 267 (432)
Q Consensus 235 Ng~idp~~~~~~~~~~~~~~glI~~~~~~~~~~ 267 (432)
.|++||.+...-..+=++..|+||++.+..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377899877665567799999999999887754
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=53.94 E-value=37 Score=31.89 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=41.8
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccCh--HHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQP--ARALVLF 420 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP--~~a~~m~ 420 (432)
.++.|-+-|+.|.+++..-.+..+..-. +- .+..+-+||+||.-.| +...+.|
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~------------------------~a-~vl~HpggH~VP~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK------------------------DA-TVLEHPGGHIVPNKAKYKEKIADFI 217 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC------------------------CC-eEEecCCCccCCCchHHHHHHHHHH
Confidence 4788999999999999987777776633 11 4888999999998664 3344445
Q ss_pred HHHH
Q 042005 421 SSFI 424 (432)
Q Consensus 421 ~~fl 424 (432)
+.++
T Consensus 218 ~~~~ 221 (230)
T KOG2551|consen 218 QSFL 221 (230)
T ss_pred HHHH
Confidence 5444
No 137
>PRK06489 hypothetical protein; Provisional
Probab=53.71 E-value=83 Score=31.41 Aligned_cols=34 Identities=15% Similarity=0.009 Sum_probs=23.0
Q ss_pred Ce-EEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 194 DF-FIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 194 ~~-yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
++ +|+|+|+|| .+|..+..+.. =.++++++.++.
T Consensus 154 ~~~~lvG~SmGG----~vAl~~A~~~P------~~V~~LVLi~s~ 188 (360)
T PRK06489 154 HLRLILGTSMGG----MHAWMWGEKYP------DFMDALMPMASQ 188 (360)
T ss_pred ceeEEEEECHHH----HHHHHHHHhCc------hhhheeeeeccC
Confidence 45 489999999 56666555432 247788776654
No 138
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=52.92 E-value=17 Score=37.16 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=44.1
Q ss_pred hhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeE-EEccccccccchHHHHHHHH
Q 042005 138 MMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFF-IAGESYAGHYIPQLAQAILY 216 (432)
Q Consensus 138 f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~y-I~GESYaG~yvP~lA~~I~~ 216 (432)
|.-.||..++++.. -+|..++...+-.+.++++..+|+. . .-.+++ +.|.|+|| .+|..+..
T Consensus 118 ~g~tgp~s~~p~tg------~~~~~~fP~~t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG----~ial~~a~ 180 (389)
T PRK06765 118 VITTGPASINPKTG------KPYGMDFPVVTILDFVRVQKELIKS----L---GIARLHAVMGPSMGG----MQAQEWAV 180 (389)
T ss_pred CCCCCCCCCCcCCC------CccCCCCCcCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHH----HHHHHHHH
Confidence 44568888876531 1233233333445556665555543 2 234565 99999999 56666655
Q ss_pred hccccccceeeeeeeEecccc
Q 042005 217 NNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 217 ~n~~~~~~~inLkGi~IGNg~ 237 (432)
+.. -.++++++.++.
T Consensus 181 ~~P------~~v~~lv~ia~~ 195 (389)
T PRK06765 181 HYP------HMVERMIGVIGN 195 (389)
T ss_pred HCh------HhhheEEEEecC
Confidence 542 246777776553
No 139
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=52.56 E-value=12 Score=33.87 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=23.4
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.++++.|+|+||..+..+| .... -.++++++.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a----~~~p------~~v~~~il~~~~ 99 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIA----ATHP------DRVRALVTVASS 99 (245)
T ss_pred CCeEEEEEcHHHHHHHHHH----HHCH------HhhheeeEecCC
Confidence 5899999999995444444 3321 246788776664
No 140
>PLN02408 phospholipase A1
Probab=51.17 E-value=34 Score=34.70 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.+.+++.+-++...+.+|.. ...++|+|+|-||-..-..|..|.+.... ...+.-+..|.|-+..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVGN 243 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVGN 243 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCccc
Confidence 56678888899999988864 34699999999996665555555443211 1134556666666553
No 141
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=50.81 E-value=20 Score=33.26 Aligned_cols=47 Identities=19% Similarity=0.252 Sum_probs=32.6
Q ss_pred HHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 180 LVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 180 L~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
-.+|++.+|+.....+-|.|-|.|| .+|..+.... -.++.|+..+|.
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGa----elALllAs~~-------~~i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGA----ELALLLASRF-------PQISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHH----HHHHHHHHHS-------SSEEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHH----HHHHHHHhcC-------CCccEEEEeCCc
Confidence 4568889999999999999999999 5555554443 257777776664
No 142
>PRK07868 acyl-CoA synthetase; Validated
Probab=50.73 E-value=23 Score=40.92 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=45.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEE-EEEcCCcccccc---cChHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTF-VTVRGAGHFVPS---YQPARALV 418 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf-~~V~~AGHmvP~---dqP~~a~~ 418 (432)
..+||+..|..|.++|....+.+.+.+. +..+ ..+.++|||.++ .-|+....
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------NAEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 4799999999999999988888876653 3344 566899999654 45666778
Q ss_pred HHHHHHc
Q 042005 419 LFSSFIN 425 (432)
Q Consensus 419 m~~~fl~ 425 (432)
.+.+||.
T Consensus 353 ~i~~wl~ 359 (994)
T PRK07868 353 TVADWVK 359 (994)
T ss_pred HHHHHHH
Confidence 8888886
No 143
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=50.47 E-value=31 Score=34.41 Aligned_cols=124 Identities=23% Similarity=0.307 Sum_probs=68.9
Q ss_pred eEEecCCCCceEEEEEEEcCCCCCCCCeEEEEcCCCChhh------hhHhhhhhcCCeEE---cCCCCeeecCCCCCCCC
Q 042005 93 YVNVDSQDGRSLFYYFVESPQNSSSKPLVLWLNGGPGFSS------FGAGTMMELGPFRV---NKDGKTLYQNEYAWNKD 163 (432)
Q Consensus 93 yl~v~~~~~~~lFywf~es~~~p~~~PlilWlnGGPGcSS------l~~G~f~E~GP~~~---~~~~~~l~~N~~SW~~~ 163 (432)
-|..++ .+--.+.|.-. . .....|+||-+-|==|.|. + ...+.+-| |.+ +.-|-.-+.|- =..-
T Consensus 53 ~v~~pd-g~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L-~~~~~~rg-~~~Vv~~~Rgcs~~~n~--~p~~ 125 (345)
T COG0429 53 RLETPD-GGFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGL-MRALSRRG-WLVVVFHFRGCSGEANT--SPRL 125 (345)
T ss_pred EEEcCC-CCEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHH-HHHHHhcC-CeEEEEecccccCCccc--Ccce
Confidence 444432 34556666553 2 2345599999988666663 4 35667777 432 22110000000 0000
Q ss_pred CcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 164 YKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 164 ~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
| +.++. .|+..||..--+++| .+++|.+|-|.||. .+|.++.+.-+. .....++++-+|+
T Consensus 126 y-h~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d----~~~~aa~~vs~P~ 185 (345)
T COG0429 126 Y-HSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD----LPLDAAVAVSAPF 185 (345)
T ss_pred e-cccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC----cccceeeeeeCHH
Confidence 1 12333 444444443334565 58999999999995 788888877543 3447777777776
No 144
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=50.25 E-value=9.2 Score=34.88 Aligned_cols=17 Identities=35% Similarity=0.790 Sum_probs=14.0
Q ss_pred CCCCeEEEEcCCCChhh
Q 042005 116 SSKPLVLWLNGGPGFSS 132 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSS 132 (432)
.+.|-|||.=|||||-=
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 45788999999999753
No 145
>PRK04940 hypothetical protein; Provisional
Probab=50.22 E-value=21 Score=32.43 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=28.1
Q ss_pred CCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccccc
Q 042005 193 RDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLETMM 244 (432)
Q Consensus 193 ~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~~~ 244 (432)
.++.|+|-|-||.|+-.+|.+ ..++.| |.||.+.|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~------------~g~~aV-LiNPAv~P~~~L 98 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL------------CGIRQV-IFNPNLFPEENM 98 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH------------HCCCEE-EECCCCChHHHH
Confidence 468999999999666666643 345555 569999996543
No 146
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=49.78 E-value=27 Score=31.28 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=38.7
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccccccc---ChHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSY---QPARALVLF 420 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~d---qP~~a~~m~ 420 (432)
++.+++..+.|..||+.-++.+.+.++ ..++.+.++||+-..+ +=.+.+++|
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~G~~~~p~~~~~l 169 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAASGFGPWPEGLDLL 169 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGGTHSS-HHHHHHH
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCcccccCCCchHHHHHHh
Confidence 555899999999999999999999875 5789999999997653 223445554
Q ss_pred H
Q 042005 421 S 421 (432)
Q Consensus 421 ~ 421 (432)
+
T Consensus 170 ~ 170 (171)
T PF06821_consen 170 Q 170 (171)
T ss_dssp H
T ss_pred c
Confidence 4
No 147
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=49.66 E-value=32 Score=32.32 Aligned_cols=38 Identities=16% Similarity=0.405 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHH
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI 214 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I 214 (432)
.+.-.+++++..+.+++ +++++|||=||..+-+.|..+
T Consensus 68 q~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHc
Confidence 34455677777777754 699999999996655555553
No 148
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=49.04 E-value=1.5e+02 Score=28.59 Aligned_cols=111 Identities=19% Similarity=0.254 Sum_probs=60.2
Q ss_pred CCCCCCeEEEEcCCCChhhhhHhh----hhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHH-CC
Q 042005 114 NSSSKPLVLWLNGGPGFSSFGAGT----MMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLAR-FP 188 (432)
Q Consensus 114 ~p~~~PlilWlnGGPGcSSl~~G~----f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~-fP 188 (432)
+..+-||+|.++|=-=..|. +.- +...|=..+..+- |.+.. ...+.+.+.+.++.++|.+=++. .|
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~-Ys~ll~hvAShGyIVV~~d~-------~~~~~-~~~~~~~~~~~~vi~Wl~~~L~~~l~ 83 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSW-YSQLLEHVASHGYIVVAPDL-------YSIGG-PDDTDEVASAAEVIDWLAKGLESKLP 83 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHH-HHHHHHHHHhCceEEEEecc-------cccCC-CCcchhHHHHHHHHHHHHhcchhhcc
Confidence 45678999999975422222 333 3334544444431 11111 11234556677776666552222 22
Q ss_pred CC---CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccc
Q 042005 189 EY---KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALI 238 (432)
Q Consensus 189 ~~---~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~i 238 (432)
.. --..+.|+|||=||+ +|-.+..++.+ .....++++++..+|+=
T Consensus 84 ~~v~~D~s~l~l~GHSrGGk----~Af~~al~~~~-~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 84 LGVKPDFSKLALAGHSRGGK----VAFAMALGNAS-SSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccccceEEeeeCCCCH----HHHHHHhhhcc-cccccceeEEEEecccc
Confidence 00 112599999999997 33333333321 12357899999988875
No 149
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=48.36 E-value=1.2e+02 Score=29.28 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHH----HHHH-CCCCCCCCeEEEccccccccchHHHHHHHHh
Q 042005 171 RTARDSYTFLVS----WLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 171 ~~a~d~~~fL~~----F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
.-|+.+.+||.+ |.+. ++ ....+--|+|+|||| -++...+-.
T Consensus 111 Gg~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGG----Lfvl~aLL~ 157 (264)
T COG2819 111 GGGDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGG----LFVLFALLT 157 (264)
T ss_pred CChHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchh----HHHHHHHhc
Confidence 456667777765 4433 32 333458999999999 455544444
No 150
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=48.01 E-value=18 Score=33.49 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=31.9
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPAR 415 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~ 415 (432)
.+++|-..|..|.+++...++...+... .. +-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~-----------------------~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD-----------------------PD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH-----------------------HH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc-----------------------CC-cEEEEECCCCcCcCChhhc
Confidence 5899999999999999877777776532 12 5588899999999987643
No 151
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=47.90 E-value=1e+02 Score=32.39 Aligned_cols=100 Identities=12% Similarity=0.210 Sum_probs=54.7
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCC---Chhhh---hHhhhhhcCCeEEcCCCCeeecCCCCCCC--CCcc----cCCh
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGP---GFSSF---GAGTMMELGPFRVNKDGKTLYQNEYAWNK--DYKV----NGDI 170 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGP---GcSSl---~~G~f~E~GP~~~~~~~~~l~~N~~SW~~--~~~~----~~~~ 170 (432)
-||-=-+.-+.+.+..||++|+-||= |.+|. +-..|.+.|=+.+-.= ....+...|-. ++.. .+.-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSv--NYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSV--NYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEe--Ccccccceeeehhhccccccccccc
Confidence 34443332223455679999999995 55444 1145666664443211 13445555555 1210 0111
Q ss_pred hhHHH--HHHHHHHHHHHCCCCCCCCeEEEccccccc
Q 042005 171 RTARD--SYTFLVSWLARFPEYKTRDFFIAGESYAGH 205 (432)
Q Consensus 171 ~~a~d--~~~fL~~F~~~fP~~~~~~~yI~GESYaG~ 205 (432)
..-++ -++++++.++.|-.= ..++-|+|||=|++
T Consensus 157 Gl~DqilALkWV~~NIe~FGGD-p~NVTl~GeSAGa~ 192 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGD-PQNVTLFGESAGAA 192 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCC-ccceEEeeccchHH
Confidence 22222 246777888888433 35799999999884
No 152
>PLN02802 triacylglycerol lipase
Probab=47.18 E-value=40 Score=35.62 Aligned_cols=65 Identities=6% Similarity=0.036 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.+.+++..-++.+++.+|.- ...++|+|+|-||-..-..|..|.+.... .+.+.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCccc
Confidence 46678888889888888643 24699999999996666666556443211 1245566666666553
No 153
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=45.73 E-value=35 Score=34.91 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=52.6
Q ss_pred ChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccch
Q 042005 129 GFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIP 208 (432)
Q Consensus 129 GcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP 208 (432)
.-..+ +-.|...| +.- +..+.--||-|-.+.. ..++++.-|++.++.-=+..++++.|.|||.||
T Consensus 66 ~~~~l-i~~L~~~G-Y~~---~~~l~~~pYDWR~~~~------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGg---- 130 (389)
T PF02450_consen 66 YFAKL-IENLEKLG-YDR---GKDLFAAPYDWRLSPA------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGG---- 130 (389)
T ss_pred hHHHH-HHHHHhcC-ccc---CCEEEEEeechhhchh------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCc----
Confidence 34455 46666677 332 2357778899955432 233344445555543213337899999999999
Q ss_pred HHHHHHHHhcccc--ccceeeeeeeEecccccc
Q 042005 209 QLAQAILYNNQHA--NQTIINLRGIAMGNALID 239 (432)
Q Consensus 209 ~lA~~I~~~n~~~--~~~~inLkGi~IGNg~id 239 (432)
.++++.++..... .+.+|. +=|.|+-|+..
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~-~~i~i~~p~~G 162 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIK-RFISIGTPFGG 162 (389)
T ss_pred hHHHHHHHhccchhhHHhhhh-EEEEeCCCCCC
Confidence 4555555554221 012333 44555555553
No 154
>PLN02324 triacylglycerol lipase
Probab=45.30 E-value=53 Score=33.91 Aligned_cols=71 Identities=13% Similarity=0.133 Sum_probs=45.4
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccc-----cccceeeeeeeEeccccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQH-----ANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~-----~~~~~inLkGi~IGNg~idp 240 (432)
...+.+++..-++...+.+|.. ...++|+|||-||-.+-..|..|.+.... .....+++.-+..|.|-|..
T Consensus 192 k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 192 TTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred hhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3457778888899999988753 24699999999997666666666553210 00123445556666665543
No 155
>PF03283 PAE: Pectinacetylesterase
Probab=44.76 E-value=1.3e+02 Score=30.47 Aligned_cols=132 Identities=20% Similarity=0.300 Sum_probs=72.1
Q ss_pred CceEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhh----hhhcCCeE-----EcCCC---CeeecCC--CCCCC---C
Q 042005 101 GRSLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGT----MMELGPFR-----VNKDG---KTLYQNE--YAWNK---D 163 (432)
Q Consensus 101 ~~~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~----f~E~GP~~-----~~~~~---~~l~~N~--~SW~~---~ 163 (432)
|+.-.|++-+.. ....+-+||.|+||=.|-+.. -- ..+.|-.. +..+| .....|| +.||. .
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~wN~V~vp 111 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYNWNHVFVP 111 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCccccccEEEEE
Confidence 444555566553 245679999999998887752 22 22344222 11111 1245677 88999 1
Q ss_pred C----cccCCh-----------hhHHHHHHHHHHH-HHH-CCCCCCCCeEEEccccccccchHHHHHHHHhcccccccee
Q 042005 164 Y----KVNGDI-----------RTARDSYTFLVSW-LAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTII 226 (432)
Q Consensus 164 ~----~~~~~~-----------~~a~d~~~fL~~F-~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~i 226 (432)
| ...++. -....+++.+.++ ... +++ ...+.|+|.|=||.-+..-+.+|.+.-.. ..
T Consensus 112 YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~ 185 (361)
T PF03283_consen 112 YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS----SV 185 (361)
T ss_pred ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc----Cc
Confidence 1 001111 1223334444444 444 433 35699999999997777777777665431 34
Q ss_pred eeeeeEeccccccc
Q 042005 227 NLRGIAMGNALIDL 240 (432)
Q Consensus 227 nLkGi~IGNg~idp 240 (432)
+++++.=..-++|.
T Consensus 186 ~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 186 KVKCLSDSGFFLDN 199 (361)
T ss_pred eEEEeccccccccc
Confidence 56665544444443
No 156
>PLN02761 lipase class 3 family protein
Probab=44.33 E-value=51 Score=34.97 Aligned_cols=71 Identities=10% Similarity=0.046 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCC-C--CCCeEEEccccccccchHHHHHHHHhccc---cccceeeeeeeEeccccccc
Q 042005 170 IRTARDSYTFLVSWLARFPEY-K--TRDFFIAGESYAGHYIPQLAQAILYNNQH---ANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~-~--~~~~yI~GESYaG~yvP~lA~~I~~~n~~---~~~~~inLkGi~IGNg~idp 240 (432)
..+.++++..++...+.+|.. + ...++|+|+|-||-.+-..|..|...+-. .....+++.-+..|.|=+..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 457788999999999888643 2 23599999999996655555555442211 01223456667777766554
No 157
>PRK14566 triosephosphate isomerase; Provisional
Probab=42.99 E-value=47 Score=32.08 Aligned_cols=63 Identities=17% Similarity=0.311 Sum_probs=47.0
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
-+.+.|++.+.|+++++...-+.....+=|. |||---|.-+..|+... ++.|++||..-+++.
T Consensus 186 At~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 186 ATPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 3457789999999999975411111222222 99999999999998764 689999999999885
No 158
>PRK14567 triosephosphate isomerase; Provisional
Probab=42.88 E-value=51 Score=31.66 Aligned_cols=63 Identities=22% Similarity=0.348 Sum_probs=46.8
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
-+.+.+++.+.++++++..+-+-....+=|. |||---|.-+..|++.. ++.|++||.+.+++.
T Consensus 176 as~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 176 ASLEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred CCHHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 4467888999999999976521111122222 89999999999998764 689999999999875
No 159
>PLN02310 triacylglycerol lipase
Probab=42.14 E-value=54 Score=33.74 Aligned_cols=65 Identities=9% Similarity=0.041 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHHHCCCC-CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 171 RTARDSYTFLVSWLARFPEY-KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~-~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.+.+++...++...+.+++- ....+.|+|+|-||-.+-..|..|.... ..+++.-+..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCccc
Confidence 45567777778777776532 2346999999999955544444443321 23456667777777653
No 160
>PLN00413 triacylglycerol lipase
Probab=41.63 E-value=29 Score=36.29 Aligned_cols=39 Identities=15% Similarity=0.288 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHH
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~ 215 (432)
.++...+++.++.+|++ +++++|+|-||..+-..|..+.
T Consensus 268 y~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 268 YTILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHH
Confidence 35677888888888754 6999999999976666555554
No 161
>PLN02934 triacylglycerol lipase
Probab=41.45 E-value=60 Score=34.34 Aligned_cols=39 Identities=18% Similarity=0.240 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHH
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~ 215 (432)
.++...++++++.+|.+ +++++|+|-||-..-..|..+.
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 45778888888888864 6999999999965554444443
No 162
>PRK11071 esterase YqiA; Provisional
Probab=40.00 E-value=34 Score=31.01 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=40.3
Q ss_pred CeEEEEcCCCChhhhhH-----hhhhhcCC-eEE-cCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC
Q 042005 119 PLVLWLNGGPGFSSFGA-----GTMMELGP-FRV-NKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK 191 (432)
Q Consensus 119 PlilWlnGGPGcSSl~~-----G~f~E~GP-~~~-~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~ 191 (432)
|.||.|.|-+|++...- ..+.+.+| +++ ..|-+ .. .++..+++.++.+.. .
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~--------------g~-----~~~~~~~l~~l~~~~---~ 59 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP--------------PY-----PADAAELLESLVLEH---G 59 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC--------------CC-----HHHHHHHHHHHHHHc---C
Confidence 67999999888776411 22334443 232 22211 00 123445556666544 3
Q ss_pred CCCeEEEccccccccchHHH
Q 042005 192 TRDFFIAGESYAGHYIPQLA 211 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA 211 (432)
.++++|.|.|.||.++-.+|
T Consensus 60 ~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 60 GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred CCCeEEEEECHHHHHHHHHH
Confidence 45899999999995544444
No 163
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=39.81 E-value=17 Score=23.87 Aligned_cols=11 Identities=36% Similarity=1.114 Sum_probs=5.8
Q ss_pred CeEEEEcCCCC
Q 042005 119 PLVLWLNGGPG 129 (432)
Q Consensus 119 PlilWlnGGPG 129 (432)
-=.||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 34789999988
No 164
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=38.95 E-value=1.4e+02 Score=27.99 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHHHC--CCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeee-Eecccccccccc
Q 042005 171 RTARDSYTFLVSWLARF--PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGI-AMGNALIDLETM 243 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~f--P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi-~IGNg~idp~~~ 243 (432)
+.++.+.+.++...+.+ ..-..+++.|.|+|.|| -+|+.++..... ..-++++| .+|.|...+...
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGG----lvar~~l~~~~~---~~~~v~~iitl~tPh~g~~~~ 129 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGG----LVARSALSLPNY---DPDSVKTIITLGTPHRGSPLA 129 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhh----HHHHHHHhcccc---ccccEEEEEEEcCCCCCcccc
Confidence 34445555555555544 22356789999999999 567766654321 11234444 467777666543
No 165
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=38.21 E-value=59 Score=32.54 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccc
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDL 240 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp 240 (432)
.++.+-++.-...+| +..++++|+|-||-.+...|..|...... ....++=+-.|-|-+..
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCccc
Confidence 344444555566677 56799999999999999999988877532 23566666677665543
No 166
>PLN02847 triacylglycerol lipase
Probab=37.72 E-value=55 Score=35.33 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=36.8
Q ss_pred ccCChhhHHHHHH----HHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecc
Q 042005 166 VNGDIRTARDSYT----FLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGN 235 (432)
Q Consensus 166 ~~~~~~~a~d~~~----fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGN 235 (432)
+.+=-.+|+.+.. .|++-+..+|.| ++.|+|||.||--+--++. ++..+. ...++..++.|-
T Consensus 223 H~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAi-lLRe~~----~fssi~CyAFgP 288 (633)
T PLN02847 223 HCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTY-ILREQK----EFSSTTCVTFAP 288 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHH-HHhcCC----CCCCceEEEecC
Confidence 3333344554444 445555667765 6899999999975555544 444332 134566777765
No 167
>PLN03037 lipase class 3 family protein; Provisional
Probab=36.49 E-value=76 Score=33.69 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHHHHHHCCCC-CCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 171 RTARDSYTFLVSWLARFPEY-KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~-~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
.+.+++..-++...+.+++. ....++|+|+|-||--+--.|..|...... ..++.-+..|.|-+.
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVG 360 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVG 360 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCcc
Confidence 34567777788888877753 345699999999996554444444433211 113444555555444
No 168
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=35.96 E-value=16 Score=37.52 Aligned_cols=108 Identities=16% Similarity=0.086 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhhh----cCCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCC
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMME----LGPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYK 191 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~E----~GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~ 191 (432)
+..|+||-.-|-=+.=.-.+-+|.+ .|=-.+.-|.+..-.++ .|. . + +....++..+..|+...|+.-
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-~~~--l---~--~D~~~l~~aVLd~L~~~p~VD 259 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-KWP--L---T--QDSSRLHQAVLDYLASRPWVD 259 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-TT---S------S-CCHHHHHHHHHHHHSTTEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-cCC--C---C--cCHHHHHHHHHHHHhcCCccC
Confidence 4669888765554544321233332 33323333333332222 121 1 1 112346677778888899998
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
...+.++|-|+||.|++.+|.. + .-.||+++.-.|.++..
T Consensus 260 ~~RV~~~G~SfGGy~AvRlA~l--e--------~~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 260 HTRVGAWGFSFGGYYAVRLAAL--E--------DPRLKAVVALGAPVHHF 299 (411)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH--T--------TTT-SEEEEES---SCG
T ss_pred hhheEEEEeccchHHHHHHHHh--c--------ccceeeEeeeCchHhhh
Confidence 8899999999999888777741 1 13689977776666543
No 169
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=35.11 E-value=22 Score=34.75 Aligned_cols=62 Identities=23% Similarity=0.280 Sum_probs=43.2
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSS 422 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~ 422 (432)
+.+||+..|+.-.-..- +...-.+|+ -.+-|++.|.++|=||-.+||....+-|+-
T Consensus 219 ~c~vLlvvG~~Sp~~~~--vv~~ns~Ld----------------------p~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHVDD--VVEMNSKLD----------------------PTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp CS-EEEEEETTSTTHHH--HHHHHHHS-----------------------CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred CCCeEEEEecCCcchhh--HHHHHhhcC----------------------cccceEEEecccCCcccccCcHHHHHHHHH
Confidence 38999999998643322 233444554 124689999999999999999999999999
Q ss_pred HHcCCC
Q 042005 423 FINGTL 428 (432)
Q Consensus 423 fl~~~~ 428 (432)
|++|.-
T Consensus 275 FlQG~G 280 (283)
T PF03096_consen 275 FLQGMG 280 (283)
T ss_dssp HHHHTT
T ss_pred HHccCC
Confidence 998754
No 170
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=35.02 E-value=30 Score=35.32 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=22.1
Q ss_pred CeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 194 DFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 194 ~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
.+-++|+|||| +.|...+.+. ..+|..++-+||.-|.
T Consensus 229 ~i~~~GHSFGG----ATa~~~l~~d-------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGG----ATALQALRQD-------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHH----HHHHHHHHH--------TT--EEEEES---TTS
T ss_pred heeeeecCchH----HHHHHHHhhc-------cCcceEEEeCCcccCC
Confidence 58999999999 4444433332 3578888999998774
No 171
>PLN02162 triacylglycerol lipase
Probab=34.48 E-value=52 Score=34.42 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHH
Q 042005 174 RDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI 214 (432)
Q Consensus 174 ~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I 214 (432)
..+.+.|++.+.++|. .+++++|||-||-.+-..|..+
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHH
Confidence 3455667777877775 4699999999995444333333
No 172
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=34.04 E-value=1.1e+02 Score=30.96 Aligned_cols=95 Identities=18% Similarity=0.370 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCChhhhhHhhhhhcCCeEEcCCCCeeecCCCCCCC---------CCcccCChhhHHHHHHHHHHHHHH
Q 042005 116 SSKPLVLWLNGGPGFSSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK---------DYKVNGDIRTARDSYTFLVSWLAR 186 (432)
Q Consensus 116 ~~~PlilWlnGGPGcSSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~---------~~~~~~~~~~a~d~~~fL~~F~~~ 186 (432)
.-..|||...|- +-|.|.|=..-- ..+.+.--.||. -|. .++..+++.+.+|-.+=+
T Consensus 241 ngq~LvIC~EGN--------AGFYEvG~m~tP---~~lgYsvLGwNhPGFagSTG~P~p-~n~~nA~DaVvQfAI~~L-- 306 (517)
T KOG1553|consen 241 NGQDLVICFEGN--------AGFYEVGVMNTP---AQLGYSVLGWNHPGFAGSTGLPYP-VNTLNAADAVVQFAIQVL-- 306 (517)
T ss_pred CCceEEEEecCC--------ccceEeeeecCh---HHhCceeeccCCCCccccCCCCCc-ccchHHHHHHHHHHHHHc--
Confidence 346788887775 457788743211 124455567888 233 467777777777766544
Q ss_pred CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 187 FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 187 fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
.|+..++.|.|-|-||.-+...|. .+.++|++++-.-+
T Consensus 307 --gf~~edIilygWSIGGF~~~waAs-----------~YPdVkavvLDAtF 344 (517)
T KOG1553|consen 307 --GFRQEDIILYGWSIGGFPVAWAAS-----------NYPDVKAVVLDATF 344 (517)
T ss_pred --CCCccceEEEEeecCCchHHHHhh-----------cCCCceEEEeecch
Confidence 567789999999999976666553 26789999875444
No 173
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=34.00 E-value=31 Score=34.47 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=33.8
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHH
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILY 216 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~ 216 (432)
+...+++.+-.||+.....+ .+...+++|.|+|-|+|.+=.+++++-.
T Consensus 126 n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 126 NTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 44567777777777776444 3455789999999999977777777655
No 174
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=33.35 E-value=34 Score=27.03 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhc
Q 042005 173 ARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNN 218 (432)
Q Consensus 173 a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n 218 (432)
--++|++.+.|+-++ |..+.|.+.|+||+ +-+-|.+--
T Consensus 6 DvdIYDAvRaflLr~--Y~~KrfIV~g~S~~------IlhNIyrlf 43 (100)
T PF07389_consen 6 DVDIYDAVRAFLLRH--YYDKRFIVYGRSNA------ILHNIYRLF 43 (100)
T ss_pred chhHHHHHHHHHHHH--HccceEEEecchHH------HHHHHHHHH
Confidence 346788899998877 77889999999994 566666543
No 175
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.90 E-value=58 Score=31.77 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=30.6
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAG 204 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG 204 (432)
-.++++.+++.+..-....|+=..-++|++|||-|.
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 357788899999999999998776679999999886
No 176
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=32.75 E-value=31 Score=25.25 Aligned_cols=17 Identities=24% Similarity=0.299 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHhhc
Q 042005 1 MANSAFIIWISLLCLSN 17 (432)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (432)
|||++|+|.+..+.|.+
T Consensus 1 MA~Kl~vialLC~aLva 17 (65)
T PF10731_consen 1 MASKLIVIALLCVALVA 17 (65)
T ss_pred CcchhhHHHHHHHHHHH
Confidence 99999988776655655
No 177
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=32.20 E-value=90 Score=20.72 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=15.1
Q ss_pred ceEEEEEEEcCCCCCCCCeEEEEcCCCC
Q 042005 102 RSLFYYFVESPQNSSSKPLVLWLNGGPG 129 (432)
Q Consensus 102 ~~lFywf~es~~~p~~~PlilWlnGGPG 129 (432)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 4567777445443334444555556664
No 178
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=31.29 E-value=38 Score=31.60 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=34.5
Q ss_pred HHHHHH-HCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 180 LVSWLA-RFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 180 L~~F~~-~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
|..|++ .|+-...+ ..|+|.|.|| ..|..+.-+.. =-+.+++.-+|.+++.
T Consensus 102 l~p~i~~~~~~~~~~-~~i~G~S~GG----~~Al~~~l~~P------d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 102 LIPYIEANYRTDPDR-RAIAGHSMGG----YGALYLALRHP------DLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHSSEEECC-EEEEEETHHH----HHHHHHHHHST------TTESEEEEESEESETT
T ss_pred chhHHHHhcccccce-eEEeccCCCc----HHHHHHHHhCc------cccccccccCcccccc
Confidence 334443 34433333 8999999999 67776665543 2588888888888776
No 179
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=29.33 E-value=99 Score=29.26 Aligned_cols=72 Identities=18% Similarity=0.144 Sum_probs=47.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEc-CCcccccccCh--HHHHHH
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVR-GAGHFVPSYQP--ARALVL 419 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~-~AGHmvP~dqP--~~a~~m 419 (432)
..+||+..|+.|-+||.....+|=+.++=. -.++-+++.|.+.+.-.+. .+=-.-|.|++ +.|++.
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-----------~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~ 232 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKEN-----------PAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQR 232 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcC-----------cccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHH
Confidence 489999999999999999998888887611 1233455555543322221 22223467665 567888
Q ss_pred HHHHHc
Q 042005 420 FSSFIN 425 (432)
Q Consensus 420 ~~~fl~ 425 (432)
+.+|++
T Consensus 233 ~~~Wf~ 238 (242)
T KOG3043|consen 233 FISWFK 238 (242)
T ss_pred HHHHHH
Confidence 888874
No 180
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=29.27 E-value=1.2e+02 Score=28.02 Aligned_cols=48 Identities=23% Similarity=0.329 Sum_probs=27.7
Q ss_pred CCeEEEEecCCccccCchhHH-HHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc
Q 042005 343 GIRIWVYSGDTDGALPVTCTR-YAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV 408 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~-~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv 408 (432)
+-+||+.+|..|.+-|..-.- ..+++|+=.+. - -+++.+...+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~---------------~---~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF---------------P---HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC---------------C---CcceEEEcCCCCcee
Confidence 579999999999998876544 44566651111 1 157778889999996
No 181
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=27.95 E-value=49 Score=30.51 Aligned_cols=55 Identities=20% Similarity=0.242 Sum_probs=37.8
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccccccChHHHHHHHHHH
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFVPSYQPARALVLFSSF 423 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmvP~dqP~~a~~m~~~f 423 (432)
..+++.+|+.|-++...-...|.+. ..++.+++.+|.|+-...-. ...+.+..|
T Consensus 150 ~~~lvi~g~~Ddvv~l~~~l~~~~~-------------------------~~~~~i~i~~a~HFF~gKl~-~l~~~i~~~ 203 (210)
T COG2945 150 SPGLVIQGDADDVVDLVAVLKWQES-------------------------IKITVITIPGADHFFHGKLI-ELRDTIADF 203 (210)
T ss_pred CCceeEecChhhhhcHHHHHHhhcC-------------------------CCCceEEecCCCceecccHH-HHHHHHHHH
Confidence 6889999999966666554444433 24788999999999866554 334445555
Q ss_pred H
Q 042005 424 I 424 (432)
Q Consensus 424 l 424 (432)
+
T Consensus 204 l 204 (210)
T COG2945 204 L 204 (210)
T ss_pred h
Confidence 4
No 182
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=27.74 E-value=1.6e+02 Score=28.71 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=41.7
Q ss_pred hhhHHHHHHHHHHHHHHCCC--C-CCCCeEEEccccccccchHHHHHHHHhccccccceee--eeeeEecccccccc
Q 042005 170 IRTARDSYTFLVSWLARFPE--Y-KTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIIN--LRGIAMGNALIDLE 241 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~--~-~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~in--LkGi~IGNg~idp~ 241 (432)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+ +.. -.+.++ |.|.+.|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l-~~~---YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAEL-APS---YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHH-hHH---hCcccccceeEEeccCCccCHH
Confidence 34555555555555444432 3 35789999999999522 223333 222 135688 99999999987754
No 183
>PRK06762 hypothetical protein; Provisional
Probab=27.38 E-value=36 Score=29.75 Aligned_cols=21 Identities=14% Similarity=0.393 Sum_probs=14.9
Q ss_pred CeEEEEcCCCCh--hhhhHhhhhh
Q 042005 119 PLVLWLNGGPGF--SSFGAGTMME 140 (432)
Q Consensus 119 PlilWlnGGPGc--SSl~~G~f~E 140 (432)
|.+||+.|.||| |.+. ..+.+
T Consensus 2 ~~li~i~G~~GsGKST~A-~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIA-KQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHH-HHHHH
Confidence 789999999987 4453 44444
No 184
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=27.13 E-value=50 Score=29.60 Aligned_cols=26 Identities=35% Similarity=0.555 Sum_probs=21.2
Q ss_pred CeEEEEcCCC--ChhhhhHhhhhhc--CCeE
Q 042005 119 PLVLWLNGGP--GFSSFGAGTMMEL--GPFR 145 (432)
Q Consensus 119 PlilWlnGGP--GcSSl~~G~f~E~--GP~~ 145 (432)
-=|+-||||| |-||+. -.|+|+ ||+.
T Consensus 23 griVlLNG~~saGKSSiA-~A~Q~~~a~pwm 52 (205)
T COG3896 23 GRIVLLNGGSSAGKSSIA-LAFQDLAAEPWM 52 (205)
T ss_pred ceEEEecCCCccchhHHH-HHHHHHhhcchh
Confidence 4578899999 889995 889986 7764
No 185
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=26.78 E-value=73 Score=33.30 Aligned_cols=62 Identities=18% Similarity=0.369 Sum_probs=44.0
Q ss_pred CCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHH
Q 042005 150 GKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAI 214 (432)
Q Consensus 150 ~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I 214 (432)
++++.--||-|-.+|. +.+..++.+.-|++.++..=+..+ +++.|.+||.||.|+=++-...
T Consensus 141 ~~~l~ga~YDwRls~~---~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 141 GKTLFGAPYDWRLSYH---NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred CceeeccccchhhccC---ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 4578888999987773 234455556667777766434455 8999999999998877765544
No 186
>COG4425 Predicted membrane protein [Function unknown]
Probab=26.06 E-value=87 Score=32.64 Aligned_cols=36 Identities=17% Similarity=0.413 Sum_probs=32.0
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAG 204 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG 204 (432)
-.++|+.+++..-.....-|+=+.-++|+.|||-|.
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 357899999999999999998887789999999986
No 187
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=25.82 E-value=1.2e+02 Score=28.61 Aligned_cols=61 Identities=10% Similarity=0.031 Sum_probs=41.8
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNAL 237 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~ 237 (432)
-.+-++.+.+.+..+.. ..+++.|+|.|-|+.-+-...+++.+.... ..-+|.-+++|||-
T Consensus 29 v~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~---~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 29 VAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP---PPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---CcCceEEEEecCCC
Confidence 34556667777776664 678999999999996555555555543221 12578999999985
No 188
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=25.73 E-value=62 Score=30.37 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=23.0
Q ss_pred CCeEEEEecCCccccCchhHHHHHHhc
Q 042005 343 GIRIWVYSGDTDGALPVTCTRYAVKKL 369 (432)
Q Consensus 343 girVLIy~Gd~D~i~n~~Gt~~~i~~L 369 (432)
+++++|++|+.|..|+....++.+++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 589999999999999998887777653
No 189
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=25.59 E-value=75 Score=32.65 Aligned_cols=35 Identities=43% Similarity=0.809 Sum_probs=26.5
Q ss_pred eEEeeEEecCCCCceEEEEEEEcCCCCCCCCeE-EEEcC
Q 042005 89 QYSGYVNVDSQDGRSLFYYFVESPQNSSSKPLV-LWLNG 126 (432)
Q Consensus 89 ~ysGyl~v~~~~~~~lFywf~es~~~p~~~Pli-lWlnG 126 (432)
..+|||+.+. .++|.+ ..|+.....+-||| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 4699999985 478888 77886555666866 89886
No 190
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=25.18 E-value=66 Score=32.02 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHH
Q 042005 171 RTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQA 213 (432)
Q Consensus 171 ~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~ 213 (432)
-.+.+....++.|... +-..+++|.|+||||...=.+|..
T Consensus 109 y~~~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 109 YTLRELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred eehhHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHh
Confidence 4455666666766654 345679999999999544444443
No 191
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=24.83 E-value=1.4e+02 Score=26.67 Aligned_cols=39 Identities=5% Similarity=-0.020 Sum_probs=26.2
Q ss_pred CCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccc
Q 042005 192 TRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALID 239 (432)
Q Consensus 192 ~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~id 239 (432)
..+.+|+|+|.|+. .+++++.++ ...+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~---~~l~~l~~~------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCL---TALRWLAEQ------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHH---HHHHHHHHT------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHH---HHHHHHhhc------ccccccEEEEEcCCCc
Confidence 56799999999994 333333222 2468999999999943
No 192
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=24.17 E-value=82 Score=29.18 Aligned_cols=47 Identities=9% Similarity=0.020 Sum_probs=32.9
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHh
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
+..++.+.+.|.+..+..+.- .+++-+.|+|-||.++=+....+.+.
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 456777778888877766433 56899999999997665444444443
No 193
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=23.82 E-value=2.7e+02 Score=25.22 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=35.9
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCccc--c---cccChHHH
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHF--V---PSYQPARA 416 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHm--v---P~dqP~~a 416 (432)
-..+|++..|..|..++....+...+.|+=.+ ..+.+.+..||+|= . +.+.++++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~y~ga~HgF~~~~~~~~~~~aa 203 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAG--------------------VDVEVHVYPGAGHGFANPSRPPYDPAAA 203 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTT--------------------TTEEEEEETT--TTTTSTTSTT--HHHH
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcC--------------------CcEEEEECCCCcccccCCCCcccCHHHH
Confidence 35899999999999999998888888773111 24677777888885 2 23445555
Q ss_pred HHHHHHH
Q 042005 417 LVLFSSF 423 (432)
Q Consensus 417 ~~m~~~f 423 (432)
.+..++.
T Consensus 204 ~~a~~~~ 210 (218)
T PF01738_consen 204 EDAWQRT 210 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 194
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=23.71 E-value=59 Score=29.68 Aligned_cols=27 Identities=15% Similarity=-0.027 Sum_probs=23.7
Q ss_pred CeEEEEecCCccccCchhHHHHHHhcC
Q 042005 344 IRIWVYSGDTDGALPVTCTRYAVKKLG 370 (432)
Q Consensus 344 irVLIy~Gd~D~i~n~~Gt~~~i~~L~ 370 (432)
-+++|.+|+.|.+||....+...+.|+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999999888875
No 195
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=23.66 E-value=1.1e+02 Score=29.08 Aligned_cols=123 Identities=20% Similarity=0.154 Sum_probs=65.0
Q ss_pred eEEEEEE-EcCCCCCCCCeEEEEcCCCC----hhhhhHh---------hhhhcCCeEEcCCCCeeecCCCCCCCCCcccC
Q 042005 103 SLFYYFV-ESPQNSSSKPLVLWLNGGPG----FSSFGAG---------TMMELGPFRVNKDGKTLYQNEYAWNKDYKVNG 168 (432)
Q Consensus 103 ~lFywf~-es~~~p~~~PlilWlnGGPG----cSSl~~G---------~f~E~GP~~~~~~~~~l~~N~~SW~~~~~~~~ 168 (432)
.|....| +.......-|+||-..+=-. .+..... .|.+.|=..|..|-...-.....|. ..
T Consensus 4 ~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~-----~~ 78 (272)
T PF02129_consen 4 RLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFD-----PM 78 (272)
T ss_dssp EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B------TT
T ss_pred EEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccc-----cC
Confidence 4444444 32334567799988875322 1222100 1666675554333211111222221 11
Q ss_pred ChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEeccccccccc
Q 042005 169 DIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLET 242 (432)
Q Consensus 169 ~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~~ 242 (432)
..+.++|.++ +.+|+...|-- +-++-++|.||+|...-..|. . ..-.||.|+...+..|...
T Consensus 79 ~~~e~~D~~d-~I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~----~------~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYD-TIEWIAAQPWS-NGKVGMYGISYGGFTQWAAAA----R------RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHH-HHHHHHHCTTE-EEEEEEEEETHHHHHHHHHHT----T------T-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHH-HHHHHHhCCCC-CCeEEeeccCHHHHHHHHHHh----c------CCCCceEEEecccCCcccc
Confidence 4456666666 45677777544 447999999999954444432 1 2457999999988887654
No 196
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=23.56 E-value=3.9e+02 Score=26.07 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=52.0
Q ss_pred CCCCCeEEEEcCCCChhhhhHhhhhhc-----C-Ce-EEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHHHHHHHHHC
Q 042005 115 SSSKPLVLWLNGGPGFSSFGAGTMMEL-----G-PF-RVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTFLVSWLARF 187 (432)
Q Consensus 115 p~~~PlilWlnGGPGcSSl~~G~f~E~-----G-P~-~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~fL~~F~~~f 187 (432)
++..|+|+|=-=|-.|||..++.|.|. | |- .++... . =..||. ..-.+.++.+.+.+. .-
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~-g---~~~s~l-----~pl~~Qv~~~ce~v~----~m 87 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGD-G---IKDSSL-----MPLWEQVDVACEKVK----QM 87 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecC-C---cchhhh-----ccHHHHHHHHHHHHh----cc
Confidence 445899999999999999545666653 1 21 111110 0 012221 122233333333333 44
Q ss_pred CCCCCCCeEEEccccccccchHHHHHHHHhccc
Q 042005 188 PEYKTRDFFIAGESYAGHYIPQLAQAILYNNQH 220 (432)
Q Consensus 188 P~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~ 220 (432)
|++. .-++|.|+|-|| .+|+++++.-+.
T Consensus 88 ~~ls-qGynivg~SQGg----lv~Raliq~cd~ 115 (296)
T KOG2541|consen 88 PELS-QGYNIVGYSQGG----LVARALIQFCDN 115 (296)
T ss_pred hhcc-CceEEEEEcccc----HHHHHHHHhCCC
Confidence 5553 579999999999 789999888753
No 197
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=23.29 E-value=1.7e+02 Score=27.31 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=34.2
Q ss_pred cCChhhHHHHHHHHHHHHHHCCCCCC-CCeEEEccccccccchHHHHHHHHh
Q 042005 167 NGDIRTARDSYTFLVSWLARFPEYKT-RDFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 167 ~~~~~~a~d~~~fL~~F~~~fP~~~~-~~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
.+|..+++-+-+.+.+.+..-++-.. .++.-+| ||||.|.+.+.+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 46778888888888888887654432 5677778 999999999988875
No 198
>KOG3101 consensus Esterase D [General function prediction only]
Probab=23.29 E-value=4e+02 Score=25.17 Aligned_cols=164 Identities=13% Similarity=0.113 Sum_probs=78.0
Q ss_pred eeEEeeEEecC----CCCceEEEE-EEEcCC-CCCCCCeEEEEcCCCChhhhhHhhhh----------hcCCeEEcCCC-
Q 042005 88 DQYSGYVNVDS----QDGRSLFYY-FVESPQ-NSSSKPLVLWLNGGPGFSSFGAGTMM----------ELGPFRVNKDG- 150 (432)
Q Consensus 88 ~~ysGyl~v~~----~~~~~lFyw-f~es~~-~p~~~PlilWlnGGPGcSSl~~G~f~----------E~GP~~~~~~~- 150 (432)
+.+-|+..|-. +.+-.|=|- +++-.. ..+.-|+++||.|= -|.- -+|. +.|=..+.+|.
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~---~Nfi~Ksg~qq~As~hgl~vV~PDTS 83 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTH---ENFIEKSGFQQQASKHGLAVVAPDTS 83 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccc---hhhHhhhhHHHhHhhcCeEEECCCCC
Confidence 44555555421 223345444 444221 22346999999864 3432 2333 35555566553
Q ss_pred ---CeeecCCCCCCC----C-CcccCChhhHH------HHHHHHHHHHH-HCCCCCCCCeEEEccccccccchHHHHHHH
Q 042005 151 ---KTLYQNEYAWNK----D-YKVNGDIRTAR------DSYTFLVSWLA-RFPEYKTRDFFIAGESYAGHYIPQLAQAIL 215 (432)
Q Consensus 151 ---~~l~~N~~SW~~----~-~~~~~~~~~a~------d~~~fL~~F~~-~fP~~~~~~~yI~GESYaG~yvP~lA~~I~ 215 (432)
-.+.--+-||.= + |...+++.=++ .+.+=|-+-+. .+-.+-..+.-|+|+|.|||=+-.++
T Consensus 84 PRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~---- 159 (283)
T KOG3101|consen 84 PRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIY---- 159 (283)
T ss_pred CCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEE----
Confidence 122333457765 1 22223332222 22222222222 22223334589999999997433322
Q ss_pred HhccccccceeeeeeeEeccccccccccchhhHHHHHhcCCCCHHHHHhHh
Q 042005 216 YNNQHANQTIINLRGIAMGNALIDLETMMKGTVDFYWTHALMPDEIYHGLT 266 (432)
Q Consensus 216 ~~n~~~~~~~inLkGi~IGNg~idp~~~~~~~~~~~~~~glI~~~~~~~~~ 266 (432)
-+| .-..|++.--.|..+|...--+.-.|.-..|- ++.+|+...
T Consensus 160 Lkn------~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yD 203 (283)
T KOG3101|consen 160 LKN------PSKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYD 203 (283)
T ss_pred EcC------cccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcc
Confidence 122 22567777777777776542222233333443 555666543
No 199
>PLN02429 triosephosphate isomerase
Probab=23.13 E-value=1.6e+02 Score=29.36 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=46.0
Q ss_pred CChhhHHHHHHHHHHHHHH-CCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 168 GDIRTARDSYTFLVSWLAR-FPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~-fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
-..+.++++..++++++.. +.+-....+-|. |||---|.-+..|... .++.|+.||.+.+++.
T Consensus 236 as~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 236 ASPQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 4457888899999999864 322211222222 8999999999888765 4789999999999864
No 200
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=22.85 E-value=31 Score=23.62 Aligned_cols=18 Identities=28% Similarity=0.104 Sum_probs=13.6
Q ss_pred CCchhHHHHHHHHHhhcc
Q 042005 1 MANSAFIIWISLLCLSNW 18 (432)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (432)
|-++++++.+.+.+|+++
T Consensus 1 MkKi~~~~i~~~~~~L~a 18 (46)
T PF02402_consen 1 MKKIIFIGIFLLTMLLAA 18 (46)
T ss_pred CcEEEEeHHHHHHHHHHH
Confidence 667777777777777777
No 201
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.50 E-value=1.4e+02 Score=33.38 Aligned_cols=92 Identities=23% Similarity=0.329 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCCCh-------hhhhHhhhhhcCCeEEcCCCCeeecCCCCCCC---CCc-------ccCChhhHHHHHH
Q 042005 116 SSKPLVLWLNGGPGF-------SSFGAGTMMELGPFRVNKDGKTLYQNEYAWNK---DYK-------VNGDIRTARDSYT 178 (432)
Q Consensus 116 ~~~PlilWlnGGPGc-------SSl~~G~f~E~GP~~~~~~~~~l~~N~~SW~~---~~~-------~~~~~~~a~d~~~ 178 (432)
..-| ||++-|--|+ .|.. ..-..+||++-.. -..||++..= |.. ...-.+-++.+.+
T Consensus 88 sGIP-VLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~----~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 88 SGIP-VLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTE----DRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVND 161 (973)
T ss_pred CCce-EEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhh----cccCccccceEEEcccchhhhhccHhHHHHHHHHHH
Confidence 3345 4677776663 3442 5666789998332 2356655511 211 0122355666666
Q ss_pred HHHHHHH---HCCCCC---CCCeEEEccccccccchHHHHHHHHh
Q 042005 179 FLVSWLA---RFPEYK---TRDFFIAGESYAGHYIPQLAQAILYN 217 (432)
Q Consensus 179 fL~~F~~---~fP~~~---~~~~yI~GESYaG~yvP~lA~~I~~~ 217 (432)
+++.-++ .-+||+ ...+.|.|+|+|| -.|+..+..
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGG----iVAra~~tl 202 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGG----IVARATLTL 202 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchh----HHHHHHHhh
Confidence 6665444 445666 5569999999999 445444443
No 202
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=22.22 E-value=3e+02 Score=26.36 Aligned_cols=65 Identities=25% Similarity=0.282 Sum_probs=41.0
Q ss_pred cCCeEEEEecC------CccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcC--CcccccccCh
Q 042005 342 EGIRIWVYSGD------TDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRG--AGHFVPSYQP 413 (432)
Q Consensus 342 ~girVLIy~Gd------~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~--AGHmvP~dqP 413 (432)
++++||-..|+ -|.+||..+.+..=.-+. +++. ..+..+|.| |.|---++.|
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~-------------~~~~-------~Y~e~~v~G~~a~HS~LheN~ 242 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLK-------------NRAK-------SYQEKTVTGKDAQHSQLHENP 242 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCT-------------TTSS-------EEEEEEEESGGGSCCGGGCCH
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhh-------------cccC-------ceEEEEEECCCCccccCCCCH
Confidence 46999999999 788888866432211111 1111 234466655 7999888887
Q ss_pred HHHHHHHHHHHcCC
Q 042005 414 ARALVLFSSFINGT 427 (432)
Q Consensus 414 ~~a~~m~~~fl~~~ 427 (432)
.+.++|.+||-++
T Consensus 243 -~V~~~I~~FLw~k 255 (255)
T PF06028_consen 243 -QVDKLIIQFLWGK 255 (255)
T ss_dssp -HHHHHHHHHHCT-
T ss_pred -HHHHHHHHHhcCC
Confidence 5568888998653
No 203
>PF11587 Prion_bPrPp: Major prion protein bPrPp - N terminal; PDB: 1SKH_A.
Probab=22.21 E-value=28 Score=21.57 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=11.2
Q ss_pred CCchhHHHHHHHHHhhc
Q 042005 1 MANSAFIIWISLLCLSN 17 (432)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (432)
|+|+.+-|||..+.+..
T Consensus 1 M~k~~lgcWilvLfvat 17 (29)
T PF11587_consen 1 MVKSHLGCWILVLFVAT 17 (29)
T ss_dssp --TTTTTTHHHHHHHHH
T ss_pred CccccccHHHHHHHHHH
Confidence 88999999986655443
No 204
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.19 E-value=74 Score=29.56 Aligned_cols=26 Identities=31% Similarity=0.717 Sum_probs=20.5
Q ss_pred eeEEEEecceEEEEEcCCcccccccC
Q 042005 387 GGYAVGYQNLTFVTVRGAGHFVPSYQ 412 (432)
Q Consensus 387 ~G~~k~~~nLTf~~V~~AGHmvP~dq 412 (432)
.|.++..+--+|+.|.||||..|.+.
T Consensus 257 ~~~v~glkt~~~lev~ga~~ylp~ya 282 (310)
T COG4569 257 VGQVSGLKTAVWLEVEGAAHYLPAYA 282 (310)
T ss_pred ceeeeccceEEEEEEecccccCcccc
Confidence 35555555679999999999999875
No 205
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=22.13 E-value=1.2e+02 Score=27.45 Aligned_cols=37 Identities=19% Similarity=0.151 Sum_probs=24.7
Q ss_pred hhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccch
Q 042005 170 IRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIP 208 (432)
Q Consensus 170 ~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP 208 (432)
+..|.++..|+...=..+ -..-.+-+.|+|||..-+=
T Consensus 88 ~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G 124 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVG 124 (177)
T ss_pred HHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHH
Confidence 356777777777765555 1134689999999995433
No 206
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=21.74 E-value=1.3e+02 Score=32.65 Aligned_cols=74 Identities=30% Similarity=0.403 Sum_probs=46.6
Q ss_pred cCCeEEEEecCCccccCchhHHHHHHhcCCCCCccceeeeecCeeeeEEEEecceEEEEEcCCcccc-----cc-cC---
Q 042005 342 EGIRIWVYSGDTDGALPVTCTRYAVKKLGTPVRTAWYPWYTQGEVGGYAVGYQNLTFVTVRGAGHFV-----PS-YQ--- 412 (432)
Q Consensus 342 ~girVLIy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~G~~k~~~nLTf~~V~~AGHmv-----P~-dq--- 412 (432)
+|.+.+|.+|..|.++|..-+-+---.|+ .++.|- -..|.|+.|.+|=|+= |- |.
T Consensus 554 ~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln-------------~~~eG~---~s~lrYyeV~naqHfDaf~~~pG~~~r~V 617 (690)
T PF10605_consen 554 HGKPAIIVHGRSDALLPVNHTSRPYLGLN-------------RQVEGR---ASRLRYYEVTNAQHFDAFLDFPGFDTRFV 617 (690)
T ss_pred CCCceEEEecccceecccCCCchHHHHHh-------------hhhccc---ccceeEEEecCCeechhhccCCCCCcccc
Confidence 37899999999999999866544333332 111111 1258888888888862 21 11
Q ss_pred -----hHHHHHHHHHHH-cCCCCCC
Q 042005 413 -----PARALVLFSSFI-NGTLPPP 431 (432)
Q Consensus 413 -----P~~a~~m~~~fl-~~~~~~~ 431 (432)
-.+|+++|..+| .|.+||+
T Consensus 618 Plh~Y~~qALd~M~a~L~~G~~LPp 642 (690)
T PF10605_consen 618 PLHPYFFQALDLMWAHLKSGAALPP 642 (690)
T ss_pred cccHHHHHHHHHHHHHhhcCCCCCc
Confidence 156777776665 5788875
No 207
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=21.49 E-value=4.5e+02 Score=27.87 Aligned_cols=114 Identities=21% Similarity=0.335 Sum_probs=73.1
Q ss_pred eEEEEEEEcCCCCCCCCeEEEEcCCCChhhhhHhhhhh--c-CCeEEcCCCCeeecCCCCCCCCCcccCChhhHHHHHHH
Q 042005 103 SLFYYFVESPQNSSSKPLVLWLNGGPGFSSFGAGTMME--L-GPFRVNKDGKTLYQNEYAWNKDYKVNGDIRTARDSYTF 179 (432)
Q Consensus 103 ~lFywf~es~~~p~~~PlilWlnGGPGcSSl~~G~f~E--~-GP~~~~~~~~~l~~N~~SW~~~~~~~~~~~~a~d~~~f 179 (432)
.++|+|-+-. -+-||.+.+.|==..=+.+ |.|+- + .||.+=.|. ++. -.+. | -+.++--+.+.+.
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~PfLL~~Dp-Rle--GGaF---Y--lGs~eyE~~I~~~ 344 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPFLLIGDP-RLE--GGAF---Y--LGSDEYEQGIINV 344 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcch-hHHHHHhcCCCeEEeecc-ccc--ccee---e--eCcHHHHHHHHHH
Confidence 4555555442 3459999999966566654 55544 4 399875442 111 0110 2 2556667777888
Q ss_pred HHHHHHHCCCCCCCCeEEEccccccccchHHHHHHHHhccccccceeeeeeeEecccccccc
Q 042005 180 LVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAILYNNQHANQTIINLRGIAMGNALIDLE 241 (432)
Q Consensus 180 L~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I~~~n~~~~~~~inLkGi~IGNg~idp~ 241 (432)
+++-++.- .|..+++.|+|=|.|--=+-+.+ .+++=..|++|=|+++--
T Consensus 345 I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYg------------a~l~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 345 IQEKLDYL-GFDHDQLILSGLSMGTFGALYYG------------AKLSPHAIIVGKPLVNLG 393 (511)
T ss_pred HHHHHHHh-CCCHHHeeeccccccchhhhhhc------------ccCCCceEEEcCcccchh
Confidence 88888766 68889999999999862111111 257888999999988743
No 208
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=21.19 E-value=55 Score=29.01 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=17.9
Q ss_pred CCeEEEEcCCCCh------hhhhHhhhhhcCCeEE
Q 042005 118 KPLVLWLNGGPGF------SSFGAGTMMELGPFRV 146 (432)
Q Consensus 118 ~PlilWlnGGPGc------SSl~~G~f~E~GP~~~ 146 (432)
+|.||||.|=||+ ..+. --|.+.|+-..
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~-~~L~~~g~~~~ 34 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALE-RRLFARGIKVY 34 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHH-HHHHHTTS-EE
T ss_pred CCEEEEEECCCCCCHHHHHHHHH-HHHHHcCCcEE
Confidence 4899999999985 3443 45566776443
No 209
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.16 E-value=1.5e+02 Score=30.76 Aligned_cols=42 Identities=24% Similarity=0.243 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHHHHHHCCCCCCCCeEEEccccccccchHHHHHH
Q 042005 168 GDIRTARDSYTFLVSWLARFPEYKTRDFFIAGESYAGHYIPQLAQAI 214 (432)
Q Consensus 168 ~~~~~a~d~~~fL~~F~~~fP~~~~~~~yI~GESYaG~yvP~lA~~I 214 (432)
+.+++-.|+ ..|..++++-+.=+..|+..+|-|||| .||..+
T Consensus 143 tseQALADf-A~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWf 184 (492)
T KOG2183|consen 143 TSEQALADF-AELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWF 184 (492)
T ss_pred cHHHHHHHH-HHHHHHHhhccccccCcEEEecCchhh----HHHHHH
Confidence 344555554 445556666655567799999999999 555544
Done!