Query 042007
Match_columns 844
No_of_seqs 561 out of 4126
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 22:35:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eh1_A Flavohemoprotein; struc 100.0 3.4E-29 1.1E-33 263.2 19.5 221 529-844 3-235 (243)
2 4fk8_A Ferredoxin--NADP reduct 100.0 4.5E-29 1.5E-33 266.7 15.0 233 527-844 17-268 (271)
3 1tvc_A Methane monooxygenase c 100.0 6.1E-28 2.1E-32 254.9 21.5 227 528-844 9-244 (250)
4 1qfj_A Protein (flavin reducta 100.0 5.9E-28 2E-32 251.9 17.3 223 530-844 3-229 (232)
5 3jqq_A Ferredoxin NADP reducta 99.9 1.9E-27 6.5E-32 259.6 19.4 240 530-844 16-316 (316)
6 3lo8_A Ferredoxin--NADP reduct 99.9 2.7E-27 9.4E-32 258.1 20.5 223 529-830 28-286 (311)
7 3vo2_A Putative uncharacterize 99.9 4E-27 1.4E-31 256.6 21.6 223 530-831 34-286 (310)
8 4g1v_A Flavohemoglobin; three 99.9 3.9E-27 1.3E-31 265.8 22.0 220 528-844 148-390 (399)
9 1fdr_A Flavodoxin reductase; f 99.9 3.6E-27 1.2E-31 248.5 19.8 230 529-844 4-247 (248)
10 2qdx_A Ferredoxin reductase; o 99.9 4.7E-27 1.6E-31 249.1 17.7 231 528-844 2-253 (257)
11 2eix_A NADH-cytochrome B5 redu 99.9 1.4E-26 4.9E-31 243.2 21.0 219 529-831 11-235 (243)
12 2r6h_A NADH:ubiquinone oxidore 99.9 1.2E-26 4E-31 250.4 19.0 232 528-844 8-289 (290)
13 2bgi_A Ferredoxin-NADP(H) redu 99.9 1.8E-26 6.1E-31 246.7 19.6 229 530-844 17-266 (272)
14 1krh_A Benzoate 1,2-dioxygenas 99.9 1.1E-26 3.7E-31 256.4 17.4 223 529-844 108-335 (338)
15 2pia_A Phthalate dioxygenase r 99.9 2.3E-25 7.9E-30 243.8 23.5 211 529-844 8-225 (321)
16 3a1f_A Cytochrome B-245 heavy 99.9 3.1E-26 1.1E-30 230.0 14.8 180 648-844 1-186 (186)
17 1gvh_A Flavohemoprotein; oxido 99.9 7.5E-26 2.6E-30 255.1 19.3 232 529-844 152-390 (396)
18 1cqx_A Flavohemoprotein; globi 99.9 1.6E-25 5.6E-30 252.9 21.2 231 529-844 154-396 (403)
19 2bmw_A Ferredoxin--NADP reduct 99.9 2.7E-25 9.1E-30 241.5 22.0 225 530-829 22-278 (304)
20 1umk_A B5R, NADH-cytochrome B5 99.9 8.5E-26 2.9E-30 241.8 16.7 220 529-831 16-267 (275)
21 1fnb_A Ferredoxin-NADP+ reduct 99.9 4.9E-25 1.7E-29 240.6 23.0 223 529-830 37-289 (314)
22 2cnd_A NADH-dependent nitrate 99.9 7.4E-25 2.5E-29 233.8 19.9 224 529-831 12-261 (270)
23 2b5o_A FNR, ferredoxin--NADP r 99.9 1.6E-24 5.5E-29 243.9 21.9 223 530-830 123-377 (402)
24 1ep3_B Dihydroorotate dehydrog 99.9 1.5E-24 5.3E-29 230.4 19.3 210 531-843 7-222 (262)
25 2rc5_A Ferredoxin-NADP reducta 99.9 6.3E-24 2.2E-28 231.8 19.4 221 529-831 21-291 (314)
26 3a8r_A Putative uncharacterize 99.8 6.3E-21 2.1E-25 190.6 12.8 166 79-249 7-173 (179)
27 2gpj_A Siderophore-interacting 99.8 2.4E-19 8.2E-24 189.2 19.9 199 528-830 7-215 (252)
28 2lmt_A Calmodulin-related prot 99.8 5E-18 1.7E-22 163.7 15.4 136 99-246 6-147 (148)
29 2obh_A Centrin-2; DNA repair c 99.7 9.2E-18 3.2E-22 160.6 14.4 134 100-245 3-142 (143)
30 2lhi_A Calmodulin, serine/thre 99.7 4.7E-18 1.6E-22 169.2 10.3 138 98-248 6-149 (176)
31 1s6c_A KV4 potassium channel-i 99.7 2.6E-17 8.9E-22 163.9 15.7 146 97-248 15-170 (183)
32 1ddg_A Sulfite reductase (NADP 99.7 5.8E-18 2E-22 188.2 12.1 186 556-830 145-345 (374)
33 3u0k_A Rcamp; fluorescent prot 99.7 1.4E-17 4.9E-22 182.6 14.7 137 97-245 296-438 (440)
34 3pm8_A PFCDPK2, calcium-depend 99.7 6.4E-18 2.2E-22 171.3 9.6 140 97-246 51-195 (197)
35 1s1e_A KV channel interacting 99.7 7.8E-17 2.7E-21 166.8 17.5 148 97-248 48-203 (224)
36 3dd4_A KV channel-interacting 99.7 3E-17 1E-21 170.4 13.2 146 99-248 63-216 (229)
37 2l4h_A Calcium and integrin-bi 99.7 2.8E-17 9.6E-22 168.9 11.9 145 97-248 45-204 (214)
38 3i5g_C Myosin catalytic light 99.7 4.3E-17 1.5E-21 159.5 12.6 137 99-248 5-153 (159)
39 1exr_A Calmodulin; high resolu 99.7 1.1E-16 3.7E-21 153.8 15.2 136 99-246 6-147 (148)
40 3ox6_A Calcium-binding protein 99.7 1.5E-16 5E-21 152.7 15.9 137 98-245 6-152 (153)
41 3k21_A PFCDPK3, calcium-depend 99.7 6.1E-17 2.1E-21 163.2 13.7 139 98-245 47-190 (191)
42 2ehb_A Calcineurin B-like prot 99.7 9.9E-17 3.4E-21 163.2 15.4 147 97-249 31-186 (207)
43 4dql_A Bifunctional P-450/NADP 99.7 9.3E-17 3.2E-21 179.4 16.1 189 557-829 157-361 (393)
44 1g8i_A Frequenin, neuronal cal 99.7 2E-16 6.7E-21 158.3 16.3 149 97-249 22-178 (190)
45 2jul_A Calsenilin; EF-hand, ca 99.7 1.5E-16 5.3E-21 167.9 16.2 148 97-248 88-243 (256)
46 3qrx_A Centrin; calcium-bindin 99.7 1.3E-16 4.3E-21 156.4 14.5 138 99-248 24-167 (169)
47 2zfd_A Calcineurin B-like prot 99.7 1.6E-16 5.5E-21 164.4 16.0 146 98-249 43-197 (226)
48 3i5g_B Myosin regulatory light 99.7 5.4E-17 1.9E-21 157.7 11.1 134 98-248 11-150 (153)
49 3ll8_B Calcineurin subunit B t 99.7 1.8E-16 6.2E-21 152.7 14.3 141 100-248 3-146 (155)
50 2bl0_C Myosin regulatory light 99.7 1.1E-16 3.8E-21 152.1 12.6 133 100-245 3-141 (142)
51 3fwb_A Cell division control p 99.7 3.4E-16 1.2E-20 151.8 16.0 136 99-246 19-160 (161)
52 2l2e_A Calcium-binding protein 99.7 3.3E-16 1.1E-20 156.9 16.2 147 98-249 23-178 (190)
53 1jba_A GCAP-2, protein (guanyl 99.7 3.5E-16 1.2E-20 158.8 16.6 144 100-248 22-178 (204)
54 1dtl_A Cardiac troponin C; hel 99.7 1.8E-16 6.3E-21 153.8 13.8 137 99-247 14-160 (161)
55 1fpw_A Yeast frequenin, calciu 99.7 2.9E-16 9.9E-21 157.1 15.6 149 97-249 22-178 (190)
56 1bjf_A Neurocalcin delta; calc 99.7 6E-16 2.1E-20 155.2 17.8 148 97-248 22-177 (193)
57 2jnf_A Troponin C; stretch act 99.7 2.2E-16 7.4E-21 153.0 13.5 138 99-248 9-157 (158)
58 1dgu_A Calcium-saturated CIB; 99.7 2E-16 6.8E-21 157.7 13.1 144 98-248 15-173 (183)
59 4ds7_A Calmodulin, CAM; protei 99.7 3.8E-16 1.3E-20 148.9 14.2 135 98-245 6-146 (147)
60 2d8n_A Recoverin; structural g 99.7 5.1E-16 1.8E-20 157.9 15.7 147 98-248 31-187 (207)
61 2ct9_A Calcium-binding protein 99.7 1.6E-16 5.4E-21 162.1 11.3 141 98-248 24-184 (208)
62 1m45_A MLC1P, myosin light cha 99.7 5.1E-17 1.7E-21 155.6 7.0 129 105-246 9-147 (148)
63 3e3r_A Calcyphosin, calcyphosi 99.7 1.5E-16 5E-21 161.2 10.6 144 100-248 34-183 (204)
64 1nya_A Calerythrin; EF-hand, m 99.7 1.1E-15 3.9E-20 150.4 15.6 135 100-248 4-166 (176)
65 1top_A Troponin C; contractIle 99.7 9E-16 3.1E-20 148.9 14.6 138 98-247 15-161 (162)
66 3j04_B Myosin regulatory light 99.7 3E-16 1E-20 149.3 10.7 134 99-248 3-142 (143)
67 2f2o_A Calmodulin fused with c 99.7 6.2E-16 2.1E-20 153.1 13.3 137 100-248 8-150 (179)
68 2mys_B Myosin; muscle protein, 99.7 1.6E-15 5.6E-20 148.3 16.2 135 99-249 21-162 (166)
69 1f20_A Nitric-oxide synthase; 99.6 1.9E-15 6.4E-20 171.4 18.1 179 573-830 208-404 (435)
70 2mys_C Myosin; muscle protein, 99.6 2.3E-15 7.7E-20 143.8 15.6 136 100-246 5-148 (149)
71 2bec_A Calcineurin B homologou 99.6 2.8E-16 9.7E-21 159.3 9.8 140 98-247 24-184 (202)
72 2r2i_A Guanylyl cyclase-activa 99.6 1.4E-15 4.9E-20 153.5 14.7 144 100-248 14-161 (198)
73 3khe_A Calmodulin-like domain 99.6 2E-16 7E-21 158.2 8.3 135 100-248 37-187 (191)
74 1tll_A Nitric-oxide synthase, 99.6 2.7E-16 9.1E-21 187.7 10.6 189 559-829 418-624 (688)
75 2ovk_C Myosin catalytic light 99.6 8.3E-16 2.8E-20 149.2 12.1 137 100-249 6-154 (159)
76 1s6i_A CDPK, calcium-dependent 99.6 1.8E-16 6.3E-21 159.3 7.2 136 100-249 7-147 (188)
77 2ccm_A Calexcitin; EF hand, ca 99.6 2.2E-15 7.6E-20 150.9 15.1 135 99-247 8-172 (191)
78 3sjs_A URE3-BP sequence specif 99.6 2.6E-15 8.8E-20 154.9 15.9 132 98-248 46-182 (220)
79 2ggz_A Guanylyl cyclase-activa 99.6 1.1E-15 3.9E-20 156.2 13.0 144 100-249 19-166 (211)
80 1wdc_C Scallop myosin; calcium 99.6 1E-15 3.5E-20 147.9 11.8 137 100-249 6-153 (156)
81 3akb_A Putative calcium bindin 99.6 2.2E-15 7.4E-20 146.7 14.1 132 102-247 3-161 (166)
82 1wdc_B Scallop myosin; calcium 99.6 2.7E-15 9.2E-20 145.1 14.2 133 99-248 14-152 (156)
83 3mse_B Calcium-dependent prote 99.6 1.1E-15 3.7E-20 152.2 11.5 133 99-246 35-178 (180)
84 1uhk_A Aequorin 2, aequorin; E 99.6 1.5E-15 5E-20 151.9 12.3 137 99-247 12-174 (191)
85 1qv0_A Obelin, OBL; photoprote 99.6 1.4E-15 4.9E-20 152.6 12.0 137 99-247 16-178 (195)
86 2bl0_B Myosin regulatory light 99.6 2.3E-15 7.8E-20 143.2 12.8 132 100-247 5-141 (145)
87 2aao_A CDPK, calcium-dependent 99.6 9.8E-16 3.3E-20 149.6 10.2 135 99-247 23-162 (166)
88 2qtl_A MSR;, methionine syntha 99.6 2.7E-15 9.3E-20 173.7 14.3 159 559-751 278-453 (539)
89 2hpk_A Photoprotein berovin; s 99.6 1.8E-15 6E-20 154.1 11.2 134 100-247 33-191 (208)
90 3dtp_E RLC, myosin regulatory 99.6 2.2E-15 7.5E-20 152.3 11.8 133 100-249 54-192 (196)
91 2ovk_B RLC, myosin regulatory 99.6 1.7E-15 5.9E-20 146.0 10.3 134 99-249 12-151 (153)
92 3nyv_A Calmodulin-domain prote 99.6 2.8E-15 9.5E-20 173.1 13.4 135 99-247 331-481 (484)
93 3q5i_A Protein kinase; CDPK, m 99.6 2E-15 7E-20 175.2 11.9 137 98-248 350-499 (504)
94 1w7j_B Myosin light chain 1; m 99.6 3.9E-16 1.3E-20 149.9 4.6 133 100-245 7-149 (151)
95 1y1x_A Leishmania major homolo 99.6 7E-15 2.4E-19 147.9 14.0 128 101-247 28-158 (191)
96 2znd_A Programmed cell death p 99.6 1.1E-14 3.8E-19 143.4 15.1 128 101-247 8-139 (172)
97 2lvv_A Flagellar calcium-bindi 99.6 1.9E-15 6.6E-20 156.4 9.9 139 97-247 45-199 (226)
98 3lij_A Calcium/calmodulin depe 99.6 1.9E-15 6.6E-20 174.9 10.5 137 98-248 341-490 (494)
99 2sas_A Sarcoplasmic calcium-bi 99.6 3.3E-15 1.1E-19 148.2 10.3 134 100-247 5-168 (185)
100 1jfj_A Ehcabp, calcium-binding 99.6 2.3E-15 7.9E-20 140.7 8.1 124 105-244 2-133 (134)
101 1q80_A SCP, sarcoplasmic calci 99.6 1.1E-14 3.6E-19 143.2 13.0 136 100-247 3-157 (174)
102 1ggw_A Protein (CDC4P); light 99.6 5.1E-15 1.7E-19 140.3 10.3 125 105-246 7-139 (140)
103 2bpo_A CPR, P450R, NADPH-cytoc 99.6 2.1E-15 7.2E-20 180.0 8.8 208 556-829 413-652 (682)
104 3sg6_A Gcamp2, myosin light ch 99.6 1.5E-14 5.2E-19 162.6 14.1 135 99-245 308-448 (450)
105 1alv_A Calpain, S-camld; calci 99.6 1.7E-14 5.7E-19 142.4 12.6 126 102-246 3-140 (173)
106 3cs1_A Flagellar calcium-bindi 99.6 3.6E-15 1.2E-19 153.6 7.6 141 97-247 42-196 (219)
107 3lyu_A Putative hydrogenase; t 99.5 9.6E-15 3.3E-19 139.8 9.9 131 648-832 3-133 (142)
108 3lrx_A Putative hydrogenase; a 99.5 1.4E-14 4.7E-19 141.4 10.8 140 646-843 5-145 (158)
109 3mwu_A Calmodulin-domain prote 99.5 3.5E-15 1.2E-19 172.4 7.8 138 98-247 326-482 (486)
110 2be4_A Hypothetical protein LO 99.5 8.6E-15 2.9E-19 154.8 9.0 142 104-249 105-271 (272)
111 2qac_A Myosin A tail domain in 99.5 4.6E-14 1.6E-18 134.8 12.3 127 101-245 12-145 (146)
112 3qfs_A CPR, P450R, NADPH--cyto 99.5 7.9E-14 2.7E-18 158.0 16.2 182 572-829 231-427 (458)
113 2i7a_A Calpain 13; calcium-dep 99.5 4.2E-14 1.4E-18 140.3 11.7 119 113-247 16-143 (174)
114 3qe2_A CPR, P450R, NADPH--cyto 99.5 7.8E-14 2.7E-18 164.6 14.6 192 559-829 381-587 (618)
115 2f33_A Calbindin; EF-hand, Ca2 99.5 2.2E-14 7.4E-19 150.9 7.2 139 102-246 15-175 (263)
116 1k94_A Grancalcin; penta-EF-ha 99.5 2E-13 6.7E-18 133.4 13.5 119 109-247 5-133 (165)
117 1gjy_A Sorcin, CP-22, V19; cal 99.5 2.4E-13 8.1E-18 133.2 13.9 120 107-247 8-135 (167)
118 2be4_A Hypothetical protein LO 99.5 6.6E-14 2.2E-18 148.0 10.1 143 103-247 11-177 (272)
119 1eg3_A Dystrophin; EF-hand lik 99.5 4.8E-13 1.7E-17 139.2 16.0 140 102-248 81-244 (261)
120 1juo_A Sorcin; calcium-binding 99.5 2.4E-13 8.2E-18 137.3 13.2 121 106-247 38-166 (198)
121 2f33_A Calbindin; EF-hand, Ca2 99.4 5.3E-13 1.8E-17 140.2 13.4 136 102-247 102-261 (263)
122 1y1x_A Leishmania major homolo 99.4 6.5E-13 2.2E-17 133.4 13.1 125 99-245 62-188 (191)
123 2hps_A Coelenterazine-binding 99.4 2.9E-14 1E-18 141.9 3.1 139 99-247 10-167 (186)
124 3fs7_A Parvalbumin, thymic; ca 99.4 7.8E-13 2.7E-17 119.9 10.5 104 128-245 4-108 (109)
125 1ij5_A Plasmodial specific LAV 99.4 3.8E-13 1.3E-17 146.8 8.8 125 105-247 190-319 (323)
126 5pal_A Parvalbumin; calcium-bi 99.4 1.7E-12 5.7E-17 117.7 11.2 101 132-246 7-108 (109)
127 2pvb_A Protein (parvalbumin); 99.4 1.9E-12 6.6E-17 117.1 11.2 104 127-245 3-107 (108)
128 3bow_A Calpain-2 catalytic sub 99.4 1.8E-12 6.1E-17 156.0 13.5 126 102-246 531-668 (714)
129 2znd_A Programmed cell death p 99.4 4.9E-12 1.7E-16 124.3 13.8 126 99-246 43-170 (172)
130 3h4s_E KCBP interacting Ca2+-b 99.4 4.4E-13 1.5E-17 127.0 6.0 102 135-247 4-106 (135)
131 3a4u_B Multiple coagulation fa 99.4 3.2E-13 1.1E-17 129.4 5.0 104 135-244 28-142 (143)
132 1pva_A Parvalbumin; calcium bi 99.4 2.1E-12 7E-17 117.2 10.1 106 127-246 3-109 (110)
133 1bu3_A Calcium-binding protein 99.4 3.4E-12 1.2E-16 115.6 11.2 105 127-245 3-108 (109)
134 1rwy_A Parvalbumin alpha; EF-h 99.3 2.1E-12 7.3E-17 116.9 9.5 102 131-246 6-108 (109)
135 1rro_A RAT oncomodulin; calciu 99.3 3.7E-12 1.3E-16 115.2 10.5 103 129-245 4-107 (108)
136 1djx_A PLC-D1, phosphoinositid 99.3 1.8E-12 6E-17 152.9 8.1 129 105-247 13-150 (624)
137 2d8n_A Recoverin; structural g 99.3 8.1E-12 2.8E-16 126.7 11.5 123 114-247 12-136 (207)
138 1ij5_A Plasmodial specific LAV 99.3 2E-12 7E-17 141.0 7.4 130 97-246 116-251 (323)
139 3sjs_A URE3-BP sequence specif 99.3 9.9E-12 3.4E-16 127.9 10.7 126 98-246 85-217 (220)
140 1qxp_A MU-like calpain; M-calp 99.2 1E-11 3.4E-16 153.9 9.9 128 100-246 531-670 (900)
141 1alv_A Calpain, S-camld; calci 99.2 3.4E-11 1.2E-15 118.4 11.2 123 99-245 46-168 (173)
142 2l2e_A Calcium-binding protein 99.2 4.6E-11 1.6E-15 119.1 12.1 121 114-246 4-127 (190)
143 1sjj_A Actinin; 3-helix bundle 99.2 1.1E-11 3.6E-16 153.3 9.0 129 100-248 722-861 (863)
144 2zkm_X 1-phosphatidylinositol- 99.2 2.1E-11 7.1E-16 147.1 11.0 163 78-247 121-298 (799)
145 1s6c_A KV4 potassium channel-i 99.2 9.3E-11 3.2E-15 116.1 12.5 118 119-247 2-121 (183)
146 2i7a_A Calpain 13; calcium-dep 99.2 7E-11 2.4E-15 117.0 11.5 123 99-245 45-172 (174)
147 2kyc_A Parvalbumin-3, parvalbu 99.2 3.1E-12 1E-16 115.7 1.3 102 130-245 5-107 (108)
148 1fpw_A Yeast frequenin, calciu 99.2 9.5E-11 3.3E-15 116.7 11.9 122 114-246 4-127 (190)
149 1k94_A Grancalcin; penta-EF-ha 99.2 1.1E-10 3.9E-15 113.6 11.5 122 99-245 39-160 (165)
150 1g8i_A Frequenin, neuronal cal 99.2 2.5E-10 8.5E-15 113.7 14.0 121 115-246 5-127 (190)
151 1gjy_A Sorcin, CP-22, V19; cal 99.1 1.4E-10 4.9E-15 113.2 11.3 121 99-244 41-161 (167)
152 1jfj_A Ehcabp, calcium-binding 99.1 1.4E-10 4.9E-15 107.7 10.8 103 136-247 2-104 (134)
153 2bl0_C Myosin regulatory light 99.1 3.7E-10 1.2E-14 106.7 13.1 103 135-248 7-109 (142)
154 2sas_A Sarcoplasmic calcium-bi 99.1 2.9E-10 1E-14 112.2 12.5 109 135-247 9-134 (185)
155 1bjf_A Neurocalcin delta; calc 99.1 3.2E-10 1.1E-14 113.2 12.8 123 114-247 4-128 (193)
156 1s1e_A KV channel interacting 99.1 2.6E-10 8.9E-15 117.5 12.5 123 114-247 30-154 (224)
157 1jba_A GCAP-2, protein (guanyl 99.1 1.9E-10 6.3E-15 116.3 10.7 118 116-247 6-124 (204)
158 2obh_A Centrin-2; DNA repair c 99.1 2.3E-10 7.7E-15 108.9 10.2 102 136-248 8-109 (143)
159 2ehb_A Calcineurin B-like prot 99.1 3.5E-10 1.2E-14 114.5 12.0 124 113-245 12-138 (207)
160 1exr_A Calmodulin; high resolu 99.1 5.8E-10 2E-14 106.5 12.4 102 136-248 12-113 (148)
161 3qrx_A Centrin; calcium-bindin 99.1 5.9E-10 2E-14 108.6 12.4 103 135-248 29-131 (169)
162 1juo_A Sorcin; calcium-binding 99.1 3.9E-10 1.3E-14 113.5 11.3 123 98-244 71-195 (198)
163 4ds7_A Calmodulin, CAM; protei 99.1 7.2E-10 2.5E-14 104.9 12.5 102 136-248 13-114 (147)
164 3fwb_A Cell division control p 99.1 1E-09 3.4E-14 105.8 12.8 102 136-248 25-126 (161)
165 2f2o_A Calmodulin fused with c 99.1 9.1E-10 3.1E-14 108.4 12.6 103 135-248 12-114 (179)
166 1s6j_A CDPK, calcium-dependent 99.0 3.9E-11 1.3E-15 103.8 1.6 85 150-244 1-85 (87)
167 2lv7_A Calcium-binding protein 99.0 2E-10 6.9E-15 102.7 6.3 66 172-245 34-99 (100)
168 3khe_A Calmodulin-like domain 99.0 9.6E-10 3.3E-14 109.4 11.7 102 132-245 38-150 (191)
169 2jul_A Calsenilin; EF-hand, ca 99.0 9.6E-10 3.3E-14 115.6 12.2 123 114-247 70-194 (256)
170 5pal_A Parvalbumin; calcium-bi 99.0 1.4E-09 4.9E-14 98.1 11.2 94 104-201 10-107 (109)
171 1dtl_A Cardiac troponin C; hel 99.0 1.3E-09 4.3E-14 105.2 11.2 104 136-247 20-124 (161)
172 1nya_A Calerythrin; EF-hand, m 99.0 8.6E-10 3E-14 107.9 10.2 109 135-247 8-131 (176)
173 2ggz_A Guanylyl cyclase-activa 99.0 1.3E-09 4.6E-14 110.8 12.0 120 104-248 58-188 (211)
174 1qxp_A MU-like calpain; M-calp 99.0 1.1E-10 3.9E-15 144.4 4.7 128 101-247 729-868 (900)
175 3ox6_A Calcium-binding protein 99.0 1.2E-09 4.2E-14 103.9 11.0 104 136-246 13-116 (153)
176 2ccm_A Calexcitin; EF hand, ca 99.0 1.7E-09 5.6E-14 107.8 12.1 109 135-247 13-138 (191)
177 2lmt_A Calmodulin-related prot 99.0 1.3E-09 4.3E-14 104.4 10.7 102 136-248 12-113 (148)
178 3u0k_A Rcamp; fluorescent prot 99.0 1.1E-09 3.8E-14 120.4 11.5 102 136-248 304-405 (440)
179 3fs7_A Parvalbumin, thymic; ca 99.0 1.1E-09 3.8E-14 98.9 9.6 94 104-201 11-108 (109)
180 3e3r_A Calcyphosin, calcyphosi 99.0 1.3E-09 4.5E-14 109.7 10.1 100 136-247 39-138 (204)
181 2jnf_A Troponin C; stretch act 99.0 2.9E-09 1E-13 102.3 11.9 96 150-248 26-121 (158)
182 3bow_A Calpain-2 catalytic sub 99.0 1E-09 3.5E-14 132.0 10.7 126 99-247 574-699 (714)
183 2r2i_A Guanylyl cyclase-activa 99.0 1.4E-09 5E-14 109.2 10.1 101 136-247 16-117 (198)
184 3nso_A Protein S100-A3; EF-han 99.0 8.1E-10 2.8E-14 98.7 7.1 72 173-247 9-82 (101)
185 3pm8_A PFCDPK2, calcium-depend 99.0 1.2E-09 4E-14 110.2 9.2 101 135-247 58-158 (197)
186 1top_A Troponin C; contractIle 99.0 3.9E-09 1.3E-13 101.7 12.2 105 136-248 22-126 (162)
187 1m45_A MLC1P, myosin light cha 98.9 1E-09 3.5E-14 104.3 7.8 106 137-248 7-113 (148)
188 2zfd_A Calcineurin B-like prot 98.9 2.8E-09 9.7E-14 109.7 11.6 98 136-245 50-149 (226)
189 1rwy_A Parvalbumin alpha; EF-h 98.9 2.6E-09 9E-14 96.3 9.9 95 103-201 9-107 (109)
190 2lhi_A Calmodulin, serine/thre 98.9 1.7E-09 5.7E-14 107.2 9.3 103 135-248 12-114 (176)
191 1bu3_A Calcium-binding protein 98.9 3.2E-09 1.1E-13 95.8 10.4 94 103-200 10-107 (109)
192 4eto_A Protein S100-A4; calciu 98.9 1.8E-09 6.3E-14 95.0 8.2 72 173-247 9-82 (93)
193 3akb_A Putative calcium bindin 98.9 3.1E-09 1.1E-13 102.7 10.6 108 135-247 5-127 (166)
194 3n22_A Protein S100-A2; EF-han 98.9 1.9E-09 6.5E-14 95.9 8.1 72 173-247 10-83 (98)
195 2kz2_A Calmodulin, CAM; TR2C, 98.9 3.5E-09 1.2E-13 93.3 9.7 72 167-246 22-93 (94)
196 1uhk_A Aequorin 2, aequorin; E 98.9 4.2E-09 1.4E-13 104.6 11.4 108 136-247 18-138 (191)
197 3mse_B Calcium-dependent prote 98.9 4.2E-09 1.4E-13 104.3 11.3 96 135-245 40-135 (180)
198 3zwh_A Protein S100-A4; Ca-bin 98.9 2.1E-09 7.3E-14 96.6 8.3 72 173-247 12-85 (104)
199 2aao_A CDPK, calcium-dependent 98.9 3E-09 1E-13 103.2 10.1 100 136-247 29-128 (166)
200 2pvb_A Protein (parvalbumin); 98.9 2.7E-09 9.3E-14 96.1 9.0 94 104-201 10-107 (108)
201 3k21_A PFCDPK3, calcium-depend 98.9 3.9E-09 1.3E-13 105.7 10.8 98 135-246 53-150 (191)
202 1wdc_C Scallop myosin; calcium 98.9 3.4E-09 1.2E-13 101.8 9.7 102 136-248 11-114 (156)
203 3sg6_A Gcamp2, myosin light ch 98.9 3.5E-09 1.2E-13 119.1 11.1 124 114-248 289-415 (450)
204 2hpk_A Photoprotein berovin; s 98.9 3.3E-09 1.1E-13 107.5 9.9 110 135-248 37-158 (208)
205 1pva_A Parvalbumin; calcium bi 98.9 3.9E-09 1.3E-13 95.4 9.3 95 103-201 10-108 (110)
206 3ohm_B 1-phosphatidylinositol- 98.9 5.5E-09 1.9E-13 126.0 13.4 138 105-247 152-302 (885)
207 1s6i_A CDPK, calcium-dependent 98.9 2E-09 7E-14 107.6 8.1 100 136-247 12-111 (188)
208 1c07_A Protein (epidermal grow 98.9 1.1E-09 3.8E-14 96.8 5.4 67 172-248 8-74 (95)
209 2mys_C Myosin; muscle protein, 98.9 8.9E-09 3.1E-13 97.5 12.0 103 136-248 10-115 (149)
210 3nxa_A Protein S100-A16; S100 98.9 3.3E-09 1.1E-13 94.7 8.3 72 173-247 10-84 (100)
211 1qv0_A Obelin, OBL; photoprote 98.9 5.2E-09 1.8E-13 104.4 10.8 108 136-247 22-142 (195)
212 1w7j_B Myosin light chain 1; m 98.9 1.5E-09 5.2E-14 103.5 6.2 104 136-248 12-117 (151)
213 1tiz_A Calmodulin-related prot 98.9 3.1E-09 1.1E-13 86.6 6.9 64 175-246 2-65 (67)
214 1rro_A RAT oncomodulin; calciu 98.9 3.1E-09 1.1E-13 95.8 7.5 93 104-200 10-106 (108)
215 1k9u_A Polcalcin PHL P 7; poll 98.9 4.1E-09 1.4E-13 89.0 7.6 67 173-248 2-68 (78)
216 3dd4_A KV channel-interacting 98.9 1.2E-08 4E-13 105.4 12.6 102 135-247 65-167 (229)
217 3ll8_B Calcineurin subunit B t 98.9 6E-09 2E-13 99.6 9.5 97 135-246 7-103 (155)
218 2bec_A Calcineurin B homologou 98.9 4.3E-09 1.5E-13 106.0 8.7 123 117-247 8-143 (202)
219 2lnk_A Protein S100-A4; EF-han 98.8 4.1E-09 1.4E-13 96.1 7.6 72 173-247 21-94 (113)
220 2opo_A Polcalcin CHE A 3; calc 98.8 5.1E-09 1.8E-13 90.1 7.8 69 172-249 9-77 (86)
221 3li6_A Calcium-binding protein 98.8 3.2E-09 1.1E-13 86.3 6.2 63 176-246 2-64 (66)
222 1yx7_A Calsensin, LAN3-6 antig 98.8 4.4E-09 1.5E-13 89.8 7.0 74 171-246 4-77 (83)
223 3q5i_A Protein kinase; CDPK, m 98.8 1.4E-08 4.7E-13 117.6 13.3 130 105-246 323-463 (504)
224 4drw_A Protein S100-A10/annexi 98.8 1.6E-09 5.4E-14 100.0 4.2 70 174-247 15-84 (121)
225 2bl0_B Myosin regulatory light 98.8 1.2E-08 4E-13 96.3 10.4 100 136-248 7-106 (145)
226 1fi6_A EH domain protein REPS1 98.8 6.3E-09 2.1E-13 91.4 7.7 65 173-247 8-72 (92)
227 2kld_A Polycystin-2; PC2, PKD2 98.8 5E-10 1.7E-14 104.1 0.6 83 152-248 22-110 (123)
228 2b1u_A Calmodulin-like protein 98.8 3.7E-09 1.3E-13 87.3 5.7 68 171-246 3-70 (71)
229 2joj_A Centrin protein; N-term 98.8 9.5E-09 3.2E-13 86.3 8.2 67 172-246 5-71 (77)
230 1c7v_A CAVP, calcium vector pr 98.8 3.3E-09 1.1E-13 90.2 5.4 72 169-248 4-75 (81)
231 3i5g_C Myosin catalytic light 98.8 1E-08 3.5E-13 99.7 9.5 105 136-248 11-115 (159)
232 3lij_A Calcium/calmodulin depe 98.8 8E-09 2.7E-13 119.2 9.7 100 135-246 347-454 (494)
233 1avs_A Troponin C; muscle cont 98.8 6.8E-09 2.3E-13 90.3 6.7 68 172-247 18-85 (90)
234 1qjt_A EH1, epidermal growth f 98.8 4.8E-09 1.6E-13 93.5 5.8 66 172-247 9-74 (99)
235 2kgr_A Intersectin-1; structur 98.8 1.1E-08 3.7E-13 93.2 8.3 87 172-270 12-98 (111)
236 2y5i_A S100Z, S100 calcium bin 98.8 1.3E-08 4.5E-13 90.6 8.6 72 173-247 9-82 (99)
237 1q80_A SCP, sarcoplasmic calci 98.8 2.4E-08 8.2E-13 97.4 11.2 104 135-247 7-123 (174)
238 2pmy_A RAS and EF-hand domain- 98.8 1.2E-08 4E-13 89.3 8.0 65 172-246 25-89 (91)
239 1wlz_A DJBP, CAP-binding prote 98.8 7.4E-09 2.5E-13 92.8 6.8 84 155-247 6-89 (105)
240 1ggw_A Protein (CDC4P); light 98.8 2.4E-08 8.2E-13 93.9 10.5 99 136-247 7-105 (140)
241 2kn2_A Calmodulin; S MAPK phos 98.8 1.5E-08 5E-13 88.4 8.3 70 171-248 6-75 (92)
242 1j55_A S-100P protein; metal b 98.8 1.3E-08 4.4E-13 90.0 7.7 71 173-246 8-80 (95)
243 3nyv_A Calmodulin-domain prote 98.8 2E-08 7E-13 115.4 11.6 100 135-246 336-446 (484)
244 2ktg_A Calmodulin, putative; e 98.8 1.5E-08 5.1E-13 86.9 7.9 67 173-247 13-79 (85)
245 2h2k_A Protein S100-A13; calci 98.8 8E-09 2.7E-13 93.2 6.3 69 173-247 21-91 (106)
246 2wcb_A Protein S100-A12; calci 98.8 1.1E-08 3.7E-13 90.5 6.9 71 173-246 11-83 (95)
247 1snl_A Nucleobindin 1, calnuc; 98.7 1.9E-08 6.4E-13 90.2 8.3 72 175-247 21-101 (103)
248 2l4h_A Calcium and integrin-bi 98.7 2.1E-08 7.2E-13 102.4 9.8 85 152-247 73-158 (214)
249 2ovk_C Myosin catalytic light 98.7 2.9E-08 9.8E-13 95.6 10.0 105 136-248 11-115 (159)
250 1qx2_A Vitamin D-dependent cal 98.7 1.3E-08 4.3E-13 85.2 6.4 69 172-246 3-73 (76)
251 1wdc_B Scallop myosin; calcium 98.7 6.6E-08 2.3E-12 92.7 12.2 98 136-248 20-117 (156)
252 3qr0_A Phospholipase C-beta (P 98.7 1.6E-08 5.3E-13 121.5 9.2 134 107-247 162-309 (816)
253 2jq6_A EH domain-containing pr 98.7 1.1E-08 3.8E-13 96.5 6.2 85 172-269 49-133 (139)
254 1iq3_A Ralbp1-interacting prot 98.7 9.2E-09 3.1E-13 93.5 5.5 87 171-269 19-105 (110)
255 3rm1_A Protein S100-B; alpha-h 98.7 2.3E-08 8E-13 87.7 7.7 70 174-247 9-81 (92)
256 3h4s_E KCBP interacting Ca2+-b 98.7 2.2E-08 7.6E-13 94.4 7.8 94 104-202 7-105 (135)
257 2kax_A Protein S100-A5; EF-han 98.7 1.6E-08 5.6E-13 88.7 6.3 69 173-247 9-79 (92)
258 3mwu_A Calmodulin-domain prote 98.7 2E-08 7E-13 115.5 8.9 101 135-247 332-446 (486)
259 1xk4_C Calgranulin B; S100 fam 98.7 4E-08 1.4E-12 89.7 8.3 72 173-247 11-85 (113)
260 2qac_A Myosin A tail domain in 98.7 7.6E-08 2.6E-12 91.2 10.5 98 136-248 16-114 (146)
261 2kyc_A Parvalbumin-3, parvalbu 98.7 2.1E-09 7.2E-14 96.8 -0.5 95 103-201 9-107 (108)
262 1eh2_A EPS15; calcium binding, 98.7 4E-08 1.4E-12 88.6 7.7 84 173-269 14-97 (106)
263 2mys_B Myosin; muscle protein, 98.7 1.3E-07 4.6E-12 91.5 11.9 98 136-248 27-125 (166)
264 3a4u_B Multiple coagulation fa 98.6 1.2E-08 4.2E-13 97.3 4.0 91 106-200 30-142 (143)
265 1k2h_A S100A1, S-100 protein, 98.6 3.7E-08 1.3E-12 86.0 6.8 73 172-247 7-81 (93)
266 2lvv_A Flagellar calcium-bindi 98.6 1.8E-08 6.1E-13 103.8 5.5 100 136-247 53-162 (226)
267 1j7q_A CAVP, calcium vector pr 98.6 4.9E-08 1.7E-12 83.9 7.4 68 171-247 11-81 (86)
268 1xk4_A Calgranulin A; S100 fam 98.6 3.7E-08 1.3E-12 86.4 6.2 67 173-247 9-78 (93)
269 3j04_B Myosin regulatory light 98.6 7.7E-08 2.6E-12 90.6 8.8 89 149-248 18-106 (143)
270 1h8b_A ACT-EF34, alpha-actinin 98.6 9.9E-08 3.4E-12 80.0 8.4 62 170-247 6-72 (75)
271 4drw_A Protein S100-A10/annexi 98.6 3.7E-08 1.3E-12 90.8 6.3 65 99-167 11-84 (121)
272 2d58_A Allograft inflammatory 98.6 7.1E-08 2.4E-12 86.9 7.9 69 172-248 30-98 (107)
273 1cb1_A Calbindin D9K; calcium- 98.6 7.3E-08 2.5E-12 80.9 7.5 70 171-246 4-75 (78)
274 1dgu_A Calcium-saturated CIB; 98.6 1.6E-07 5.6E-12 92.7 10.8 87 150-247 37-127 (183)
275 1k8u_A S100A6, calcyclin, CACY 98.6 5E-08 1.7E-12 84.5 6.2 70 173-247 9-80 (90)
276 2ovk_B RLC, myosin regulatory 98.6 5.3E-08 1.8E-12 93.1 6.9 98 136-248 18-115 (153)
277 1psr_A Psoriasin, S100A7; EF-h 98.6 9.4E-08 3.2E-12 85.2 7.8 73 173-247 9-81 (100)
278 3i5g_B Myosin regulatory light 98.6 1.4E-07 4.9E-12 90.9 9.7 98 136-248 18-115 (153)
279 3cs1_A Flagellar calcium-bindi 98.6 3.2E-08 1.1E-12 101.3 5.2 100 136-247 50-159 (219)
280 3dtp_E RLC, myosin regulatory 98.6 2E-07 6.7E-12 93.6 10.9 98 135-248 58-155 (196)
281 2jjz_A Ionized calcium-binding 98.6 2.4E-08 8.3E-13 96.0 3.5 82 136-234 52-133 (150)
282 2jjz_A Ionized calcium-binding 98.5 8.4E-08 2.9E-12 92.1 6.7 83 100-191 47-134 (150)
283 1a4p_A S100A10; S100 family, E 98.5 9.1E-08 3.1E-12 84.6 6.3 71 173-247 8-78 (96)
284 1qls_A S100C protein, calgizza 98.5 1E-07 3.5E-12 84.3 6.6 70 173-246 12-84 (99)
285 2hps_A Coelenterazine-binding 98.5 4.2E-08 1.4E-12 97.0 4.5 99 136-247 16-131 (186)
286 2ct9_A Calcium-binding protein 98.5 1.7E-07 5.8E-12 94.8 8.0 95 103-202 64-182 (208)
287 1wy9_A Allograft inflammatory 98.5 8.8E-08 3E-12 91.7 5.0 83 100-191 45-132 (147)
288 1djx_A PLC-D1, phosphoinositid 98.5 3.4E-08 1.2E-12 116.4 2.3 97 135-247 12-108 (624)
289 1wy9_A Allograft inflammatory 98.4 2.6E-07 8.8E-12 88.4 7.5 68 172-247 46-113 (147)
290 3a8r_A Putative uncharacterize 98.4 6.9E-07 2.4E-11 88.4 9.6 99 99-201 58-169 (179)
291 1tiz_A Calmodulin-related prot 98.4 8.3E-07 2.9E-11 71.8 8.1 62 136-201 3-64 (67)
292 3li6_A Calcium-binding protein 98.4 3.9E-07 1.3E-11 73.7 5.9 61 137-201 3-63 (66)
293 2lv7_A Calcium-binding protein 98.3 4.1E-07 1.4E-11 81.0 5.5 49 151-199 49-97 (100)
294 1s6j_A CDPK, calcium-dependent 98.3 2.8E-07 9.7E-12 79.1 4.3 83 114-200 2-85 (87)
295 2kz2_A Calmodulin, CAM; TR2C, 98.3 2.2E-06 7.5E-11 75.2 9.4 67 131-201 26-92 (94)
296 2kn2_A Calmodulin; S MAPK phos 98.3 2.4E-06 8.1E-11 74.2 9.4 77 101-181 7-91 (92)
297 3fia_A Intersectin-1; EH 1 dom 98.3 1.5E-06 5.1E-11 79.5 8.1 64 173-247 32-95 (121)
298 2joj_A Centrin protein; N-term 98.2 3E-06 1E-10 70.7 8.4 64 135-202 8-71 (77)
299 1sjj_A Actinin; 3-helix bundle 98.2 8.8E-07 3E-11 109.3 6.6 89 149-245 736-824 (863)
300 1k9u_A Polcalcin PHL P 7; poll 98.2 4.2E-06 1.4E-10 70.1 7.8 62 136-202 5-66 (78)
301 2opo_A Polcalcin CHE A 3; calc 98.1 5.5E-06 1.9E-10 70.8 8.4 63 135-202 12-74 (86)
302 1sra_A Sparc; extracellular ma 98.1 6.1E-07 2.1E-11 84.8 2.1 67 173-249 76-143 (151)
303 2ktg_A Calmodulin, putative; e 98.1 5.9E-06 2E-10 70.4 8.1 63 136-202 16-78 (85)
304 2b1u_A Calmodulin-like protein 98.1 2E-06 6.8E-11 70.5 4.6 63 134-200 6-68 (71)
305 1qx2_A Vitamin D-dependent cal 98.1 5.3E-06 1.8E-10 68.9 7.2 67 133-202 4-73 (76)
306 1avs_A Troponin C; muscle cont 98.1 8.5E-06 2.9E-10 70.4 8.6 63 136-202 22-84 (90)
307 1wlz_A DJBP, CAP-binding prote 98.1 4.1E-06 1.4E-10 74.7 6.5 64 134-201 24-87 (105)
308 2pmy_A RAS and EF-hand domain- 98.1 9E-06 3.1E-10 70.6 8.0 51 149-201 38-88 (91)
309 1xk4_C Calgranulin B; S100 fam 98.1 1.1E-05 3.9E-10 73.3 8.9 82 136-234 14-102 (113)
310 1c7v_A CAVP, calcium vector pr 98.0 3.9E-06 1.3E-10 70.9 5.2 64 133-201 8-72 (81)
311 3nso_A Protein S100-A3; EF-han 98.0 1E-05 3.4E-10 72.0 7.7 64 136-202 12-81 (101)
312 3n22_A Protein S100-A2; EF-han 98.0 1.7E-05 5.7E-10 70.2 8.9 64 136-202 13-82 (98)
313 1yx7_A Calsensin, LAN3-6 antig 98.0 6.5E-06 2.2E-10 69.8 5.9 65 134-202 7-77 (83)
314 1tuz_A Diacylglycerol kinase a 98.0 1.6E-06 5.6E-11 78.8 2.0 93 82-178 11-117 (118)
315 1eh2_A EPS15; calcium binding, 98.0 1.3E-05 4.5E-10 72.0 7.8 49 151-201 27-75 (106)
316 1qjt_A EH1, epidermal growth f 97.9 1.1E-05 3.6E-10 71.7 6.0 63 134-202 11-73 (99)
317 1cb1_A Calbindin D9K; calcium- 97.9 1E-05 3.4E-10 67.5 5.6 67 132-202 5-75 (78)
318 3zwh_A Protein S100-A4; Ca-bin 97.9 2.8E-05 9.7E-10 69.5 8.9 64 136-202 15-84 (104)
319 1c07_A Protein (epidermal grow 97.9 1.3E-05 4.6E-10 70.3 6.6 62 135-202 11-72 (95)
320 1snl_A Nucleobindin 1, calnuc; 97.9 1E-05 3.6E-10 72.0 5.9 70 128-201 14-99 (103)
321 2kgr_A Intersectin-1; structur 97.9 1.8E-05 6E-10 71.8 7.4 61 136-202 16-76 (111)
322 4eto_A Protein S100-A4; calciu 97.9 2.5E-05 8.4E-10 68.4 7.8 64 136-202 12-81 (93)
323 1k2h_A S100A1, S-100 protein, 97.9 2.9E-05 9.9E-10 67.3 8.2 65 135-202 10-80 (93)
324 1j7q_A CAVP, calcium vector pr 97.9 2.8E-05 9.7E-10 66.3 7.7 63 135-202 15-80 (86)
325 1fi6_A EH domain protein REPS1 97.9 2E-05 6.9E-10 68.7 6.9 61 136-202 11-71 (92)
326 3rm1_A Protein S100-B; alpha-h 97.9 4.1E-05 1.4E-09 66.7 8.7 64 136-202 11-80 (92)
327 2d58_A Allograft inflammatory 97.8 2.2E-05 7.4E-10 70.3 6.6 62 136-201 34-95 (107)
328 1k8u_A S100A6, calcyclin, CACY 97.8 3.2E-05 1.1E-09 66.5 7.3 65 135-202 11-79 (90)
329 2y5i_A S100Z, S100 calcium bin 97.8 5.5E-05 1.9E-09 67.0 8.8 65 135-202 11-81 (99)
330 1eg3_A Dystrophin; EF-hand lik 97.8 8.4E-05 2.9E-09 77.2 11.5 87 151-246 96-195 (261)
331 1a4p_A S100A10; S100 family, E 97.8 1.4E-05 4.7E-10 70.5 4.4 28 173-200 48-75 (96)
332 2lnk_A Protein S100-A4; EF-han 97.8 3.8E-05 1.3E-09 69.7 7.2 52 150-201 35-92 (113)
333 2wcb_A Protein S100-A12; calci 97.8 4.9E-05 1.7E-09 66.7 7.7 65 135-202 13-83 (95)
334 1psr_A Psoriasin, S100A7; EF-h 97.8 9.1E-06 3.1E-10 72.2 2.7 62 100-165 7-79 (100)
335 1xk4_A Calgranulin A; S100 fam 97.7 3.1E-05 1.1E-09 67.4 5.6 64 135-202 11-77 (93)
336 1iq3_A Ralbp1-interacting prot 97.7 2E-05 6.7E-10 71.3 4.3 62 134-201 22-83 (110)
337 2kax_A Protein S100-A5; EF-han 97.7 5.1E-05 1.8E-09 66.1 6.8 65 136-203 12-79 (92)
338 3nxa_A Protein S100-A16; S100 97.7 0.00011 3.7E-09 65.2 8.9 52 152-203 28-84 (100)
339 2zkm_X 1-phosphatidylinositol- 97.7 2.2E-05 7.4E-10 94.9 5.5 94 134-247 146-248 (799)
340 3ohm_B 1-phosphatidylinositol- 97.7 7.5E-05 2.6E-09 90.3 10.1 95 134-247 150-252 (885)
341 1j55_A S-100P protein; metal b 97.7 7.5E-05 2.6E-09 65.5 7.1 63 136-201 11-79 (95)
342 3fia_A Intersectin-1; EH 1 dom 97.7 6.8E-05 2.3E-09 68.5 7.0 60 136-202 35-94 (121)
343 1qls_A S100C protein, calgizza 97.6 0.00011 3.7E-09 64.4 6.9 64 136-202 15-84 (99)
344 1nub_A Basement membrane prote 97.5 2.8E-05 9.6E-10 79.6 2.4 66 173-248 154-220 (229)
345 2jq6_A EH domain-containing pr 97.5 0.00021 7E-09 67.2 7.7 61 134-201 51-111 (139)
346 2h2k_A Protein S100-A13; calci 97.5 0.00015 5.2E-09 65.0 6.4 49 153-201 39-89 (106)
347 2kld_A Polycystin-2; PC2, PKD2 97.4 2.1E-05 7.1E-10 72.7 -0.8 85 105-201 14-107 (123)
348 3qr0_A Phospholipase C-beta (P 97.3 0.00021 7.1E-09 86.0 6.9 86 149-248 166-258 (816)
349 1h8b_A ACT-EF34, alpha-actinin 96.9 0.0021 7.2E-08 53.5 6.9 62 98-165 8-70 (75)
350 1tuz_A Diacylglycerol kinase a 96.7 0.003 1E-07 57.3 6.8 86 152-246 5-105 (118)
351 1sra_A Sparc; extracellular ma 96.6 0.00052 1.8E-08 64.8 1.2 61 135-201 78-139 (151)
352 1nub_A Basement membrane prote 94.5 0.012 4E-07 60.1 1.8 61 135-201 156-217 (229)
353 2qpt_A EH domain-containing pr 88.3 1 3.5E-05 52.0 8.9 87 172-271 456-542 (550)
354 4fl4_A Glycoside hydrolase fam 86.1 1.2 4.2E-05 37.8 5.7 54 182-243 22-75 (88)
355 2kav_A Sodium channel protein 85.0 0.81 2.8E-05 41.8 4.4 51 180-251 26-76 (129)
356 2l5y_A Stromal interaction mol 83.5 2.8 9.5E-05 39.2 7.4 29 174-202 15-43 (150)
357 4dh2_B Dockerin type 1; cellul 83.1 2 7E-05 35.9 5.8 52 184-243 9-60 (82)
358 2qpt_A EH domain-containing pr 78.3 2.5 8.6E-05 48.7 6.5 64 132-202 456-519 (550)
359 2ccl_B Endo-1,4-beta-xylanase 77.6 5.1 0.00017 31.6 6.2 52 183-244 5-56 (63)
360 3ul4_B Cellulosome enzyme, doc 74.7 2.3 7.9E-05 33.9 3.4 49 184-243 7-55 (65)
361 1pul_A Hypothetical protein C3 74.7 8.1 0.00028 34.9 7.3 69 173-248 21-94 (125)
362 2k60_A Protein (stromal intera 73.9 2.4 8.3E-05 39.6 3.8 63 173-247 14-76 (150)
363 4dck_A Sodium channel protein 70.5 4.3 0.00015 38.7 4.8 47 183-250 6-52 (168)
364 4fl4_A Glycoside hydrolase fam 70.1 3.4 0.00012 35.0 3.5 50 148-201 24-77 (88)
365 1pul_A Hypothetical protein C3 70.0 38 0.0013 30.5 10.6 70 134-205 22-95 (125)
366 2jrf_A Tubulin polymerization- 67.3 12 0.0004 36.2 7.1 71 174-248 8-83 (184)
367 2vn6_B Endoglucanase A; cell a 66.7 6.3 0.00021 31.2 4.3 48 184-244 6-53 (64)
368 1wlm_A Protein CGI-38; structu 64.5 19 0.00066 33.6 7.8 70 175-248 16-90 (151)
369 4dh2_B Dockerin type 1; cellul 62.4 3.7 0.00013 34.4 2.2 49 149-201 10-62 (82)
370 2y3n_B Cellulosomal family-48 57.9 8.9 0.00031 31.0 3.8 51 184-245 8-58 (71)
371 3op0_A Signal transduction pro 53.7 1.7E+02 0.0057 30.4 13.1 139 73-247 103-247 (323)
372 2jrf_A Tubulin polymerization- 52.6 30 0.001 33.3 7.1 65 100-168 8-83 (184)
373 2y3n_B Cellulosomal family-48 51.3 16 0.00054 29.5 4.2 50 148-202 8-59 (71)
374 4dck_A Sodium channel protein 48.8 24 0.00082 33.6 5.6 61 180-247 26-88 (168)
375 1wlm_A Protein CGI-38; structu 48.7 1.7E+02 0.0058 27.2 11.4 52 154-205 36-91 (151)
376 1daq_A Endoglucanase SS, CELS; 47.2 15 0.0005 29.7 3.4 49 184-244 8-56 (71)
377 2ccl_B Endo-1,4-beta-xylanase 45.6 28 0.00095 27.2 4.8 50 148-201 6-57 (63)
378 3ul4_B Cellulosome enzyme, doc 42.3 15 0.0005 29.2 2.6 49 149-201 8-57 (65)
379 3kcp_A Cellulosomal-scaffoldin 42.3 13 0.00045 39.0 2.9 54 183-247 250-303 (321)
380 2vn6_B Endoglucanase A; cell a 41.8 19 0.00064 28.3 3.2 48 149-201 7-54 (64)
381 2kav_A Sodium channel protein 41.3 52 0.0018 29.8 6.4 62 179-247 48-111 (129)
382 3bux_B E3 ubiquitin-protein li 39.1 3.5E+02 0.012 28.1 14.6 109 114-247 148-262 (329)
383 2l5y_A Stromal interaction mol 38.0 82 0.0028 29.3 7.3 48 150-202 27-75 (150)
384 1ldd_A APC2WHB, anaphase promo 32.3 62 0.0021 26.3 4.8 52 158-209 10-63 (74)
385 3bq3_A Defective in cullin ned 31.7 4.3E+02 0.015 26.9 12.6 63 100-169 74-140 (270)
386 3uo9_A Glutaminase kidney isof 31.6 92 0.0031 34.7 7.6 60 137-201 71-135 (534)
387 2k60_A Protein (stromal intera 30.8 67 0.0023 29.9 5.5 58 100-166 12-75 (150)
388 3s2u_A UDP-N-acetylglucosamine 25.6 44 0.0015 35.8 3.8 25 665-689 3-29 (365)
389 1vf5_A Cytochrome B6; photosyn 25.5 4.5E+02 0.015 25.8 10.7 23 371-393 83-105 (215)
390 3tdu_A DCN1-like protein 1; E2 25.4 4.7E+02 0.016 25.3 12.3 64 101-168 5-71 (200)
391 3uo9_A Glutaminase kidney isof 23.6 1.1E+02 0.0037 34.2 6.3 65 177-246 71-136 (534)
392 3kcp_A Cellulosomal-scaffoldin 23.5 27 0.00092 36.6 1.5 50 149-201 252-301 (321)
393 1daq_A Endoglucanase SS, CELS; 23.3 27 0.00091 28.1 1.1 50 148-201 8-57 (71)
394 3kev_A Galieria sulfuraria DCU 22.4 5.4E+02 0.018 24.9 15.1 65 100-169 7-74 (199)
395 3b0b_C CENP-X, centromere prot 21.2 2.1E+02 0.0072 23.6 6.2 66 172-246 10-75 (81)
No 1
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.96 E-value=3.4e-29 Score=263.20 Aligned_cols=221 Identities=14% Similarity=0.194 Sum_probs=173.6
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCC---CCccCCCcEEEEEcCCCCC--CCccCcccccCCCCCceEEEEEec-------
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPP---GFKYQSGMYLFVKCPDLSP--FEWHPFSITSAPGDYYLSVHIRTL------- 596 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~---~~~~~pGQyv~l~~p~~s~--~e~HPFTI~s~p~~~~l~l~Ir~~------- 596 (844)
+..++|++++.+++++.++++..|. .+.|+||||++|.+|..+. .++|||||+|+|+++.++|+||..
T Consensus 3 ~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~~~~~i~vk~~~~~~~~~ 82 (243)
T 4eh1_A 3 GRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDNP 82 (243)
T ss_dssp CEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCCSSCEEEEEECTTTTSSSC
T ss_pred cEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEEEEecCCCccccceeeEeccCCCCCeEEEEEEEeecCCCCC
Confidence 4678899999999999999999765 3679999999999986543 378999999999889999999999
Q ss_pred CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccch
Q 042007 597 GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGA 676 (844)
Q Consensus 597 G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGI 676 (844)
|.+|+.|.+.+ ++| .++.|+||||.+..+ ..++++||||||+||
T Consensus 83 G~~S~~l~~~l----------~~G-------------------------~~v~v~gP~G~~~~~-~~~~~~vliagGtGi 126 (243)
T 4eh1_A 83 GLVSHYLHNNV----------KVG-------------------------DSVKLYAPAGDFFYV-ERERPVVLISAGVGA 126 (243)
T ss_dssp CHHHHHHHHHC----------CTT-------------------------CEEEEEEEECSCCCC-CCSSCEEEEEEGGGH
T ss_pred CeehhHHHhcC----------CCC-------------------------CEEEEEccCcccCcC-CCCCCEEEEEccccH
Confidence 88999997643 356 689999999998765 678899999999999
Q ss_pred hchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCC
Q 042007 677 TPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGD 756 (844)
Q Consensus 677 Tp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d 756 (844)
||++|+++++..+. ..+ ++|+|++|+.+++ +|.++|+++++.. ++++++++++..+.+.
T Consensus 127 tp~~~~l~~l~~~~----------------~~~-v~l~~~~r~~~~~-~~~~el~~l~~~~---~~~~~~~~s~~~~~~~ 185 (243)
T 4eh1_A 127 TPMQAILHTLAKQN----------------KSG-VTYLYACNSAKEH-TFAQETAQLIAQQ---GWMQQVWYRDESADDV 185 (243)
T ss_dssp HHHHHHHHHHHHTT----------------CCS-EEEEEEESSGGGC-TTHHHHHHHHHHH---TCEEEEEESSCCCTTC
T ss_pred HHHHHHHHHHHHcC----------------CCe-EEEEEEeCChhhh-hHHHHHHHHHHhC---CeEEEEEEccCCCccc
Confidence 99999999998652 234 9999999999987 7788888887643 5677777765422110
Q ss_pred hhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCce
Q 042007 757 ARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTR 836 (844)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~ 836 (844)
+.||++...+ ..+.....||+|||++|++++++.+.+.+.. .
T Consensus 186 -----------------------------~~g~~~~~~~------~~~~~~~~vyvCGp~~m~~~v~~~l~~~g~~---~ 227 (243)
T 4eh1_A 186 -----------------------------LQGEMQLAEL------ILPIEDGDFYLCGPIGFMQYVVKQLLALGVD---K 227 (243)
T ss_dssp -----------------------------EESSCCCTTS------CCCTTTCEEEEEECHHHHHHHHHHHHHHTCC---G
T ss_pred -----------------------------ccCCccHHHe------eccCCCcEEEEECCHHHHHHHHHHHHHcCCC---H
Confidence 2255554332 1122356899999999999999999886542 2
Q ss_pred EEEEecCC
Q 042007 837 FDFHKENF 844 (844)
Q Consensus 837 ~~~h~E~F 844 (844)
-.+|.|.|
T Consensus 228 ~~i~~E~F 235 (243)
T 4eh1_A 228 ARIHYEVF 235 (243)
T ss_dssp GGEEEEEC
T ss_pred HHEEEecc
Confidence 35677776
No 2
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.96 E-value=4.5e-29 Score=266.73 Aligned_cols=233 Identities=18% Similarity=0.188 Sum_probs=171.1
Q ss_pred cccccEEEEEEEEecCCEEEEEEeCCCCCccCCCcEEEEEcCCCCCCCccCcccccCCCCCceEEEEEec--CCchHHHH
Q 042007 527 DLNHKVEVIKAVIYTGNVLALYMTKPPGFKYQSGMYLFVKCPDLSPFEWHPFSITSAPGDYYLSVHIRTL--GDWTTELK 604 (844)
Q Consensus 527 ~~~~~~~i~~v~~~~~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~~L~ 604 (844)
..+..++|++++.+++++.++++..|..+.|+||||++|++|..+..++|||||+|+|+++.++++|+.. |.+|+.|.
T Consensus 17 ~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~~~~v~~~~~G~~s~~l~ 96 (271)
T 4fk8_A 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYEEHLEFFSIKVQNGPLTSRLQ 96 (271)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSSEEEEEECCTTCTTHHHHT
T ss_pred ccceeEEEEEEEEcCCCEEEEEEEcCCCCCcCCCCEEEEEccCCCceeeeeEeccCCCCCCcEEEEEEEECCCchhhHHh
Confidence 3557889999999999999999998888999999999999996666789999999999888999999998 99999885
Q ss_pred HHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEe-CccCCCCCCC-CCCCeEEEEEcccchhchHHH
Q 042007 605 QRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIK-GPYGAPAQDY-KNYDILLLIGLGIGATPFISI 682 (844)
Q Consensus 605 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Id-GPyG~~~~~~-~~~~~vvlVagGiGITp~lsi 682 (844)
++ ++| .++.|+ ||||.+..+. ..++++||||||+||||++|+
T Consensus 97 ~l-----------~~G-------------------------d~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~ 140 (271)
T 4fk8_A 97 HL-----------KVG-------------------------DPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSI 140 (271)
T ss_dssp TC-----------CTT-------------------------CEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHH
T ss_pred cC-----------CCC-------------------------CEEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHH
Confidence 32 355 689999 9999986532 367899999999999999999
Q ss_pred HHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCC------CeEEEEEEEecccCCCC
Q 042007 683 IKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDK------NVIEMHNYLTSVYEEGD 756 (844)
Q Consensus 683 l~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~------~~l~i~~ylT~~~~~~d 756 (844)
++++.... ..++++|+|++|+.+++ .|.++|.++++.... ..++++..+++... .
T Consensus 141 l~~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~--~ 201 (271)
T 4fk8_A 141 IRDPDIYE----------------RFDKVVLTHTCRLKGEL-AYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEF--E 201 (271)
T ss_dssp TTCHHHHH----------------HCSEEEEEECCCSHHHH-HHHHHHHTCCTTCTTHHHHHHHHEEEEECC--------
T ss_pred HHHHHhcC----------------CCCCEEEEEecCCHHHH-hHHHHHHHHHHhCccccccccceEEEEEEecCCcc--c
Confidence 99987643 24689999999999987 567777665443211 14666655543211 0
Q ss_pred hhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH-HHhh-----CCCCcEEEEEeCChhHHHHHHHHHHhhc
Q 042007 757 ARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ-LATD-----HESSRIGVFYCGSATLTKTLKELCLEFS 830 (844)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~-~~~~-----~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 830 (844)
..||++- .+.++ +.+. ...+...||+|||++|++++++++.+.+
T Consensus 202 -----------------------------~~G~v~~-~~~~~~l~~~~~~~~~~~~~~~v~vCGp~~m~~~v~~~l~~~g 251 (271)
T 4fk8_A 202 -----------------------------NEGRITD-LIASGKLFTDLDMPPFSPEQDRVMLCGSTAMLKDTTELLKKAG 251 (271)
T ss_dssp ------------------------------CCHHHH-HHHHSHHHHHTTCCCCCTTTEEEEEEECHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccccCh-HHhcchhhhhcccccCCCCCCEEEEECCHHHHHHHHHHHHHcC
Confidence 0133221 11110 1111 1224678999999999999999998876
Q ss_pred CCCC---ceEEEEecCC
Q 042007 831 LESP---TRFDFHKENF 844 (844)
Q Consensus 831 ~~~~---~~~~~h~E~F 844 (844)
.+.. ..-.+|.|.|
T Consensus 252 v~~~~i~~~~~~~~E~y 268 (271)
T 4fk8_A 252 LVEGKNSAPGHYVIERA 268 (271)
T ss_dssp CCBCBTTBCBSEEEEES
T ss_pred CchhhcCCCCcEEEEEe
Confidence 4321 2336777765
No 3
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.96 E-value=6.1e-28 Score=254.85 Aligned_cols=227 Identities=15% Similarity=0.289 Sum_probs=174.2
Q ss_pred ccccEEEEEEEEecCCEEEEEEeC-C-C----CCccCCCcEEEEEcCCCCCCCccCcccccCCC-CCceEEEEEec--CC
Q 042007 528 LNHKVEVIKAVIYTGNVLALYMTK-P-P----GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPG-DYYLSVHIRTL--GD 598 (844)
Q Consensus 528 ~~~~~~i~~v~~~~~~v~~l~i~~-p-~----~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~-~~~l~l~Ir~~--G~ 598 (844)
....++|++++.+++++.++++.. | . .+.|+||||+.|.+|+. .++|||||+|.|. ++.++|+||.. |.
T Consensus 9 ~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~~l~i~vk~~~~G~ 86 (250)
T 1tvc_A 9 GSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPNPEGRLEFLIRVLPEGR 86 (250)
T ss_dssp SEEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSSSSCCEEEEECCCTTSS
T ss_pred ceEEEEEEEEEEcCCCeEEEEEEecCCCCcccccCcCCCcEEEEEeCCC--ccccccccCCCCCCCCeEEEEEEECCCCC
Confidence 345678888889999999999987 7 5 57899999999999863 5899999999987 68899999999 99
Q ss_pred chHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhc
Q 042007 599 WTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATP 678 (844)
Q Consensus 599 ~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp 678 (844)
+|+.|.+.+ ++| .++.|.||||.+......++++||||||+||||
T Consensus 87 ~s~~l~~~l----------~~G-------------------------d~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP 131 (250)
T 1tvc_A 87 FSDYLRNDA----------RVG-------------------------QVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAP 131 (250)
T ss_dssp SHHHHHHHS----------SSS-------------------------SEEEEEEEECCCSCCCCSSSCEEEEEESSTTHH
T ss_pred chHHHHhcC----------CCC-------------------------CEEEEEcCccccccCccCCceEEEEEeccCHHH
Confidence 999997543 356 689999999998754445689999999999999
Q ss_pred hHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChh
Q 042007 679 FISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDAR 758 (844)
Q Consensus 679 ~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~ 758 (844)
++++++++.... ...+++|+|++|+.+++ +|.++|+++++.. .+++++.++|+..+. .
T Consensus 132 ~~~~l~~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~--~- 189 (250)
T 1tvc_A 132 VVSMVRQMQEWT----------------APNETRIYFGVNTEPEL-FYIDELKSLERSM--RNLTVKACVWHPSGD--W- 189 (250)
T ss_dssp HHHHHHHHHHHT----------------CCSCEEEEEECSSSTTC-CCHHHHHHHHHHS--SSCEEEECCSSCSSC--C-
T ss_pred HHHHHHHHHhcC----------------CCceEEEEEEeCCHHHh-hhHHHHHHHHHhC--CCeEEEEEeccCCCC--c-
Confidence 999999998652 24689999999999998 8889998887543 357777777653110 0
Q ss_pred HHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEE
Q 042007 759 SALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTRFD 838 (844)
Q Consensus 759 ~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~ 838 (844)
.| +.||.+ +.+. +...... ....||+|||++|++++++.+.+.+.+ .-.
T Consensus 190 --------------------~g-----~~g~v~-~~l~-~~~~~~~-~~~~vyvCGp~~m~~~v~~~l~~~G~~---~~~ 238 (250)
T 1tvc_A 190 --------------------EG-----EQGSPI-DALR-EDLESSD-ANPDIYLCGPPGMIDAACELVRSRGIP---GEQ 238 (250)
T ss_dssp --------------------SS-----SSSSSS-HHHH-HHHHHSS-SSSEEEEESSHHHHHHHHHHHHHHCCC---CSE
T ss_pred --------------------CC-----ccceeh-HHHH-hhhhccc-CCcEEEEeCCHHHHHHHHHHHHHcCCC---HHH
Confidence 01 125554 2233 3322211 234799999999999999999876532 346
Q ss_pred EEecCC
Q 042007 839 FHKENF 844 (844)
Q Consensus 839 ~h~E~F 844 (844)
+|.|.|
T Consensus 239 i~~e~F 244 (250)
T 1tvc_A 239 VFFEKF 244 (250)
T ss_dssp EEECCC
T ss_pred EEEEec
Confidence 888887
No 4
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.95 E-value=5.9e-28 Score=251.90 Aligned_cols=223 Identities=16% Similarity=0.236 Sum_probs=166.3
Q ss_pred ccEEEEEEEEecCCEEEEEEeCCCCCccCCCcEEEEEcCCCCCCCccCcccccCCCC-CceEEEEEec--CCchHHHHHH
Q 042007 530 HKVEVIKAVIYTGNVLALYMTKPPGFKYQSGMYLFVKCPDLSPFEWHPFSITSAPGD-YYLSVHIRTL--GDWTTELKQR 606 (844)
Q Consensus 530 ~~~~i~~v~~~~~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~-~~l~l~Ir~~--G~~T~~L~~~ 606 (844)
..++|++++.+++++.++++..|..+.|+||||+.|.+|. .++|||||+|+|.+ +.++|+||.. |++|+.+.+.
T Consensus 3 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTTSTTCEEEEEC------CCHHHHHH
T ss_pred eEEEEEEEEecCCCEEEEEEecCCCCCcCCCCEEEEECCC---CceeeeecCCCCCCCCcEEEEEEEccCCchhHHHHHh
Confidence 3578889999999999999998878899999999999986 48999999999975 5899999997 4578876655
Q ss_pred HHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHH
Q 042007 607 FEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDL 686 (844)
Q Consensus 607 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l 686 (844)
+. +| .++.|.||||.+......++++||||||+||||++|+++++
T Consensus 80 l~----------~G-------------------------d~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l 124 (232)
T 1qfj_A 80 IL----------KD-------------------------HQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTA 124 (232)
T ss_dssp HH----------HH-------------------------SEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHH
T ss_pred CC----------CC-------------------------CEEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHH
Confidence 42 34 67999999999875444578999999999999999999999
Q ss_pred HHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHH
Q 042007 687 LNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQ 766 (844)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~ 766 (844)
.... ...+++|+|++|+.+++ +|.++|+++++.. .+++++..+++..+...
T Consensus 125 ~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~---------- 175 (232)
T 1qfj_A 125 LARN----------------PNRDITIYWGGREEQHL-YDLCELEALSLKH--PGLQVVPVVEQPEAGWR---------- 175 (232)
T ss_dssp HHHC----------------TTCCEEEEEEESSGGGC-TTHHHHHHHHHHC--TTEEEEEEESSCCTTCC----------
T ss_pred HhcC----------------CCCcEEEEEeeCCHHHh-hhHHHHHHHHHHC--CCeEEEEEEcCCCCCcC----------
Confidence 8652 24689999999999997 7888898887543 25788777765321100
Q ss_pred HhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHH-HhhcCCCCceEEEEecCC
Q 042007 767 KLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELC-LEFSLESPTRFDFHKENF 844 (844)
Q Consensus 767 ~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~-~~~~~~~~~~~~~h~E~F 844 (844)
| +.||.+ +.+.+.+. +..+..||+|||++|++++++.+ .+.+.+ .-.+|.|.|
T Consensus 176 -------------g-----~~g~v~-~~~~~~~~---~~~~~~vyvCGp~~m~~~v~~~l~~~~g~~---~~~i~~E~F 229 (232)
T 1qfj_A 176 -------------G-----RTGTVL-TAVLQDHG---TLAEHDIYIAGRFEMAKIARDLFCSERNAR---EDRLFGDAF 229 (232)
T ss_dssp -------------S-----EESCHH-HHHHHHCS---CCTTCEEEEESCHHHHHHHHHHHHHHSCCC---GGGEECTHH
T ss_pred -------------C-----ceeeHH-HHHHHhcC---CccccEEEEECCHHHHHHHHHHHHHHcCCC---HHHEEEeee
Confidence 0 124543 22332211 12345799999999999999988 665432 335777766
No 5
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.95 E-value=1.9e-27 Score=259.57 Aligned_cols=240 Identities=17% Similarity=0.176 Sum_probs=170.1
Q ss_pred ccEEEEEEEEec-----CCEEEEEEeCCCCCccCCCcEEEEEcCCCC---------------------------------
Q 042007 530 HKVEVIKAVIYT-----GNVLALYMTKPPGFKYQSGMYLFVKCPDLS--------------------------------- 571 (844)
Q Consensus 530 ~~~~i~~v~~~~-----~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s--------------------------------- 571 (844)
..++|++++.+. ++|.+|+|..+..++|+||||+.|.+|+.+
T Consensus 16 ~~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 95 (316)
T 3jqq_A 16 LKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIK 95 (316)
T ss_dssp EEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC----------------------------------
T ss_pred EEEEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccccccccccccccccccccccccccccccccCC
Confidence 456788888885 889999999988999999999999999864
Q ss_pred -CCCccCcccccCCCCCceEEEEEec--------------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccc
Q 042007 572 -PFEWHPFSITSAPGDYYLSVHIRTL--------------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNA 636 (844)
Q Consensus 572 -~~e~HPFTI~s~p~~~~l~l~Ir~~--------------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 636 (844)
..++|||||+|+|.++.++|+||.. |.+|+.|.++ ++|
T Consensus 96 g~~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l-----------~~G---------------- 148 (316)
T 3jqq_A 96 KQRCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNL-----------KIN---------------- 148 (316)
T ss_dssp -CCCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHTC-----------CTT----------------
T ss_pred CcccceeeecccCCCCCeEEEEEEEEEecccccccCcCCCCchhHHHhhC-----------CCC----------------
Confidence 3689999999999888999999975 8899988543 355
Q ss_pred cccccccCcCEEEEeCccCCCCCCCC---CCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEE
Q 042007 637 NFEQIQASFPKILIKGPYGAPAQDYK---NYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYF 713 (844)
Q Consensus 637 ~~~~~~~~~~~v~IdGPyG~~~~~~~---~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l 713 (844)
.+|.|+||||.+..+.. ..+++|||||||||||++|+|++++....... ........++++|
T Consensus 149 ---------d~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~------~~~~~~~~~~v~L 213 (316)
T 3jqq_A 149 ---------DDIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNL------YNRNSNYTGYITI 213 (316)
T ss_dssp ---------CEEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGT------TCCCCCCCCCEEE
T ss_pred ---------CEEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccc------cccccCCCCcEEE
Confidence 67999999999765433 26899999999999999999999876431100 0000013478999
Q ss_pred EEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChH
Q 042007 714 YWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWR 793 (844)
Q Consensus 714 ~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~ 793 (844)
+|++|+.+++ ||.++|.++++.. .+.++++.++|+....... +..+.
T Consensus 214 ~~g~R~~~d~-~~~~eL~~l~~~~-~~~~~~~~~~s~~~~~~g~-------------------------------~g~V~ 260 (316)
T 3jqq_A 214 YYGVYNEDSI-LYLNELEYFQKMY-PNNINIHYVFSYKQNSDAT-------------------------------SFYVQ 260 (316)
T ss_dssp EEEESSGGGC-TTHHHHHHHHHHC-TTTEEEEEEEGGGCC---C-------------------------------BCCHH
T ss_pred EEEecCHHHh-hcHHHHHHHHHhC-CCcEEEEEEECCCcccCCC-------------------------------ccchh
Confidence 9999999998 9999999987653 2368888888875211000 00111
Q ss_pred HHHHH----HHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCC-CceEEEEecCC
Q 042007 794 KVFGQ----LATDHESSRIGVFYCGSATLTKTLKELCLEFSLES-PTRFDFHKENF 844 (844)
Q Consensus 794 ~v~~~----~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~-~~~~~~h~E~F 844 (844)
+.+.+ +.+........||+|||++|++++++++.+.+.-+ ...-.+|.|.|
T Consensus 261 ~~l~~~~~~~~~~l~~~~~~vyvCGP~~m~~~v~~~l~~~G~~~~v~~~rih~E~f 316 (316)
T 3jqq_A 261 DEIYKRKTEFLNLFNNYKCELYICGKKSIRYKVMDILKSHDQFDEKKKKRVHVEVY 316 (316)
T ss_dssp HHHHHTHHHHHHHHHHTCCEEEEEECSTHHHHHHHHHHC----CHHHHTTEEEEEC
T ss_pred HHHHHhHHHHHHhhccCCeEEEEeCCHHHHHHHHHHHHHcCCCcccccccEEEEeC
Confidence 11111 10000012358999999999999999998865200 01225677766
No 6
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.95 E-value=2.7e-27 Score=258.07 Aligned_cols=223 Identities=13% Similarity=0.185 Sum_probs=166.6
Q ss_pred cccEEEEEEEEec-----CCEEEEEEeCCCCCccCCCcEEEEEcCCCC------CCCccCcccccCCCC-----CceEEE
Q 042007 529 NHKVEVIKAVIYT-----GNVLALYMTKPPGFKYQSGMYLFVKCPDLS------PFEWHPFSITSAPGD-----YYLSVH 592 (844)
Q Consensus 529 ~~~~~i~~v~~~~-----~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s------~~e~HPFTI~s~p~~-----~~l~l~ 592 (844)
...++|++++.++ ++++++++..|..+.|+|||||+|++|..+ ..++|||||+|+|.+ +.++|+
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~ 107 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLC 107 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEE
T ss_pred CeEEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEE
Confidence 3578899999998 899999999988899999999999999853 358999999999953 689999
Q ss_pred EEec---------------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCC
Q 042007 593 IRTL---------------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAP 657 (844)
Q Consensus 593 Ir~~---------------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~ 657 (844)
||.. |.+|+.|.++ ++| .+|.|+||||.+
T Consensus 108 Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l-----------~~G-------------------------d~v~v~gP~G~~ 151 (311)
T 3lo8_A 108 VRRAVYYDPETGKEDPSKNGVCSNFLCNS-----------KPG-------------------------DKIQLTGPSGKI 151 (311)
T ss_dssp EECCCCCCTTTCCCCGGGSCHHHHHHHTC-----------CTT-------------------------CEEEEEEEECCT
T ss_pred EEEEEecccccCcCCcCCCCchhhHHhcC-----------CCc-------------------------CEEEEEeccCCc
Confidence 9975 8899998763 356 689999999987
Q ss_pred CCCC--CCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhc
Q 042007 658 AQDY--KNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIAD 735 (844)
Q Consensus 658 ~~~~--~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~ 735 (844)
.... ..++++||||||+||||++|+|++++.+..... ...++++|+|++|+.+++ +|.++|.++++
T Consensus 152 ~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~-----------~~~~~v~l~~g~r~~~d~-~~~~el~~l~~ 219 (311)
T 3lo8_A 152 MLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNY-----------RFGGLAWLFLGVANSDSL-LYDEEFTSYLK 219 (311)
T ss_dssp TCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTC-----------CCCSEEEEEEEESSGGGC-SSHHHHHHHHH
T ss_pred ccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccc-----------cCCCCEEEEEecCChHHh-hHHHHHHHHHH
Confidence 6432 367899999999999999999999875421100 013689999999999987 78888988876
Q ss_pred cCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhh---CCCCcEEEEE
Q 042007 736 HDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATD---HESSRIGVFY 812 (844)
Q Consensus 736 ~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~---~~~~~v~V~~ 812 (844)
.. ...++++.++|+...... .++..+.+.+.+..+. .......||+
T Consensus 220 ~~-~~~~~~~~~~s~~~~~~~------------------------------g~~~~v~~~l~~~~~~~~~~~~~~~~vyv 268 (311)
T 3lo8_A 220 QY-PDNFRYDKALSREQKNRS------------------------------GGKMYVQDKIEEYSDEIFKLLDGGAHIYF 268 (311)
T ss_dssp HC-TTTEEEEEEETTTC-------------------------------------CCHHHHHHHTHHHHHHHHHTTCEEEE
T ss_pred hC-CCcEEEEEEECCCCcccC------------------------------CCcceehHHHHHHHHHHHHhhcCCcEEEE
Confidence 43 236888888876421100 0223333333322110 0012458999
Q ss_pred eCChhHHHHHHHHHHhhc
Q 042007 813 CGSATLTKTLKELCLEFS 830 (844)
Q Consensus 813 CGP~~m~~~vr~~~~~~~ 830 (844)
|||++|++++++++.++.
T Consensus 269 CGp~~m~~~v~~~L~~~~ 286 (311)
T 3lo8_A 269 CGLKGMMPGIQDTLKKVA 286 (311)
T ss_dssp EECGGGHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHH
Confidence 999999999999988864
No 7
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.95 E-value=4e-27 Score=256.62 Aligned_cols=223 Identities=15% Similarity=0.244 Sum_probs=166.9
Q ss_pred ccEEEEEEEEecCC-----EEEEEEeCCCCCccCCCcEEEEEcCCCC----CCCccCcccccCCC-----CCceEEEEEe
Q 042007 530 HKVEVIKAVIYTGN-----VLALYMTKPPGFKYQSGMYLFVKCPDLS----PFEWHPFSITSAPG-----DYYLSVHIRT 595 (844)
Q Consensus 530 ~~~~i~~v~~~~~~-----v~~l~i~~p~~~~~~pGQyv~l~~p~~s----~~e~HPFTI~s~p~-----~~~l~l~Ir~ 595 (844)
..++|++++.++++ +.+|++..|..+.|+|||||+|.+|... ++++|||||+|+|. ++.++|+||.
T Consensus 34 ~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~ 113 (310)
T 3vo2_A 34 YVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKR 113 (310)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEE
Confidence 56788889988876 9999999888889999999999998754 35799999999984 5789999998
Q ss_pred c-----------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCC-CCCC
Q 042007 596 L-----------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQ-DYKN 663 (844)
Q Consensus 596 ~-----------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~~~ 663 (844)
. |.+|+.|.++ ++| .+|.|.||||.+.. +...
T Consensus 114 ~~~~~~~~~~~~G~~S~~L~~l-----------~~G-------------------------d~v~v~gP~G~~~~~~~~~ 157 (310)
T 3vo2_A 114 LVYTNDQGEIVKGVCSNFLCDL-----------KPG-------------------------ADVKITGPVGKEMLMPKDP 157 (310)
T ss_dssp CEEECTTSCEEECHHHHHHHTC-----------CTT-------------------------CEEEEEEEECSTTCCBSCT
T ss_pred EEeccCCCCcCCcchhhHHhcC-----------CCC-------------------------CEEEEEeccCCcccCCCCC
Confidence 5 8899999863 356 68999999998653 2235
Q ss_pred CCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEE
Q 042007 664 YDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIE 743 (844)
Q Consensus 664 ~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~ 743 (844)
++++||||||+||||++|+|++++....... ....+++|+|++|+.+++ +|.++|+++++.. ..+++
T Consensus 158 ~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~-----------~~~~~v~L~~g~r~~~d~-~~~~el~~l~~~~-~~~~~ 224 (310)
T 3vo2_A 158 NATVIMLATGTGIAPFRSFLWKMFLEEHEDY-----------KFSGLAWLFLGVPTSDSL-LYKEELEKMKEMA-PDNFR 224 (310)
T ss_dssp TCEEEEEEEGGGGHHHHHHHHHHHSSCCTTC-----------CCCSEEEEEEEESSGGGC-CSHHHHHHHHHHC-TTTEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHhhcccc-----------cCCCcEEEEEEecChhhc-ccHHHHHHHHHhC-CCCEE
Confidence 7899999999999999999999875421100 124789999999999987 8888999887653 23688
Q ss_pred EEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH----HHhhCCCCcEEEEEeCChhHH
Q 042007 744 MHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ----LATDHESSRIGVFYCGSATLT 819 (844)
Q Consensus 744 i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~----~~~~~~~~~v~V~~CGP~~m~ 819 (844)
+++++|+...... | ++..+.+.+.+ +.+........||+|||++|+
T Consensus 225 v~~~~sr~~~~~~-----------------------g-------~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~~M~ 274 (310)
T 3vo2_A 225 LDFAVSREQTNAA-----------------------G-------EKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGME 274 (310)
T ss_dssp EEEEETTTCBCTT-----------------------C-------CBCCHHHHHHTTHHHHHHHHTSTTEEEEEEESTTHH
T ss_pred EEEEECCCCCCCC-----------------------C-------cceehHHHHHHHHHHHHHhcccCCcEEEEeCCHHHH
Confidence 8888887532110 0 11122222221 111112236789999999999
Q ss_pred HHHHHHHHhhcC
Q 042007 820 KTLKELCLEFSL 831 (844)
Q Consensus 820 ~~vr~~~~~~~~ 831 (844)
+++++++.++..
T Consensus 275 ~~v~~~L~~~~~ 286 (310)
T 3vo2_A 275 KGIDDIMLNLAA 286 (310)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987543
No 8
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.95 E-value=3.9e-27 Score=265.81 Aligned_cols=220 Identities=17% Similarity=0.203 Sum_probs=173.6
Q ss_pred ccccEEEEEEEEecCCEEEEEEeCCC--CC-----ccCCCcEEEEEcC----CCCCCCccCcccccCCCCCceEEEEEe-
Q 042007 528 LNHKVEVIKAVIYTGNVLALYMTKPP--GF-----KYQSGMYLFVKCP----DLSPFEWHPFSITSAPGDYYLSVHIRT- 595 (844)
Q Consensus 528 ~~~~~~i~~v~~~~~~v~~l~i~~p~--~~-----~~~pGQyv~l~~p----~~s~~e~HPFTI~s~p~~~~l~l~Ir~- 595 (844)
.+..++|++++.+++++.++++..|. .+ .|+||||+.|+++ +....++|||||+|+|+++.++|+||.
T Consensus 148 ~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~~~~~~i~Vk~~ 227 (399)
T 4g1v_A 148 GWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSASTKNGLRFAVKME 227 (399)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCCTTCEEEEEECC
T ss_pred cceEEEEEEEEEcCCCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEEEeCCCCCCccceeeeecccCCCCCCeEEEEEEec
Confidence 45678899999999999999998764 33 7999999999974 333478999999999998999999999
Q ss_pred -------cCCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCC----CC
Q 042007 596 -------LGDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYK----NY 664 (844)
Q Consensus 596 -------~G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~----~~ 664 (844)
.|.+|+.|++.+ ++| .++.|.||||.+..+.. .+
T Consensus 228 ~~~~~~~~G~~S~~L~~~l----------~~G-------------------------d~v~v~gP~G~f~l~~~~~~~~~ 272 (399)
T 4g1v_A 228 AARENFPAGLVSEYLHKDA----------KVG-------------------------DEIKLSAPAGDFAINKELIHQNE 272 (399)
T ss_dssp CCBTTBCCCHHHHHHHHTC----------CTT-------------------------CEEEEEEEECSCCCCTTTTTCSS
T ss_pred cCCCCCCCCEehhHHHhCC----------CCC-------------------------CEEEEEecccceeeCcccccCCC
Confidence 577899997543 356 68999999999865544 57
Q ss_pred CeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEE
Q 042007 665 DILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEM 744 (844)
Q Consensus 665 ~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i 744 (844)
+++||||||+||||++|++++++... ..++++|+|++|+.+++ +|.++|+++++.. .++++
T Consensus 273 ~~~vlIagG~GitP~~s~l~~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~ 333 (399)
T 4g1v_A 273 VPLVLLSSGVGVTPLLAMLEEQVKCN----------------PNRPIYWIQSSYDEKTQ-AFKKHVDELLAEC--ANVDK 333 (399)
T ss_dssp SCEEEEEEGGGHHHHHHHHHHHHHHC----------------TTSCEEEEEEESSSTTS-TTHHHHHHHHTTC--SSEEE
T ss_pred CCEEEEecceeHhHHHHHHHHHHHcC----------------CCCCEEEEEecCCHHHh-hhHHHHHHHHHhC--CCcEE
Confidence 89999999999999999999998752 34789999999999887 8889999887643 35777
Q ss_pred EEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHH
Q 042007 745 HNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKE 824 (844)
Q Consensus 745 ~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~ 824 (844)
++++++.. ||++.+.+ .+.. +. +..||+|||++|++++++
T Consensus 334 ~~~~s~~~-----------------------------------g~~~~~~l-~~~~---~~-~~~vyvCGp~~m~~~v~~ 373 (399)
T 4g1v_A 334 IIVHTDTE-----------------------------------PLINAAFL-KEKS---PA-HADVYTCGSLAFMQAMIG 373 (399)
T ss_dssp EEEETTTS-----------------------------------CCCCHHHH-HHHS---CS-SCEEEEEECHHHHHHHHH
T ss_pred EEEEeCCC-----------------------------------CcccHHHH-HhhC---CC-CCEEEEECCHHHHHHHHH
Confidence 77765320 67775433 2222 22 468999999999999999
Q ss_pred HHHhhcCCCCceEEEEecCC
Q 042007 825 LCLEFSLESPTRFDFHKENF 844 (844)
Q Consensus 825 ~~~~~~~~~~~~~~~h~E~F 844 (844)
.+.+.+.+ .-.+|.|.|
T Consensus 374 ~L~~~Gv~---~~~i~~E~F 390 (399)
T 4g1v_A 374 HLKELEHR---DDMIHYEPF 390 (399)
T ss_dssp HHHHTTCC---GGGEEEEES
T ss_pred HHHHcCCC---HHHeeeecc
Confidence 99886542 335677776
No 9
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.95 E-value=3.6e-27 Score=248.52 Aligned_cols=230 Identities=13% Similarity=0.184 Sum_probs=168.8
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCCCCccCCCcEEEEEcCCCCCCCccCcccccCCCCCceEEEEEec--CCchHHHHHH
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPPGFKYQSGMYLFVKCPDLSPFEWHPFSITSAPGDYYLSVHIRTL--GDWTTELKQR 606 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~~L~~~ 606 (844)
+..++|++++.+++++.++++. |..+.|+||||+.|.+|..+..++|||||+|+|.++.++++||.. |.+|+.|.++
T Consensus 4 ~~~~~V~~~~~~~~~~~~l~l~-~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~~~l~~~v~~~~~G~~s~~l~~l 82 (248)
T 1fdr_A 4 WVTGKVTKVQNWTDALFSLTVH-APVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAAL 82 (248)
T ss_dssp EEEEEEEEEEECSSSEEEEEEE-CCCCCCCTTCEEEEEECC---CEEEEEECCSCTTCSSEEEEEECCTTCSSHHHHHTC
T ss_pred eEEEEEEEEEEcCCCEEEEEEe-CCCCCcCCCCcEEEEccCCCCeeeeeecccCCCCCCcEEEEEEEeCCCchhhHHHhC
Confidence 4578899999999999999996 667899999999999997666789999999999888999999988 9999998742
Q ss_pred HHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEe-CccCCCCCCCC-CCCeEEEEEcccchhchHHHHH
Q 042007 607 FEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIK-GPYGAPAQDYK-NYDILLLIGLGIGATPFISIIK 684 (844)
Q Consensus 607 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlVagGiGITp~lsil~ 684 (844)
++| .++.|. ||||.+..+.. +++++||||||+||||++++++
T Consensus 83 -----------~~G-------------------------d~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~ 126 (248)
T 1fdr_A 83 -----------KPG-------------------------DEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILR 126 (248)
T ss_dssp -----------CTT-------------------------CEEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHH
T ss_pred -----------CCc-------------------------CEEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHH
Confidence 356 679999 99999753322 3789999999999999999999
Q ss_pred HHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHH
Q 042007 685 DLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAM 764 (844)
Q Consensus 685 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~ 764 (844)
++.... ...+++|+|++|+.+++ +|.++|+++++.. ..+++++..+|+......
T Consensus 127 ~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~-~~~~~~~~~~s~~~~~~~-------- 180 (248)
T 1fdr_A 127 LGKDLD----------------RFKNLVLVHAARYAADL-SYLPLMQELEKRY-EGKLRIQTVVSRETAAGS-------- 180 (248)
T ss_dssp HCCSCT----------------TCSEEEEEEEESSGGGC-TTHHHHHHHHHHT-TTSEEEEEEESSSCCTTE--------
T ss_pred HHHhhC----------------CCCcEEEEEEcCCHHHh-hHHHHHHHHHHhC-cCcEEEEEEEecCCCCCC--------
Confidence 874321 24789999999999987 8888898886542 236788877776422100
Q ss_pred HHHhhhhcCCccccccCcccccccCCChHHHHH-----HHHhh-CCCCcEEEEEeCChhHHHHHHHHH-HhhcCCC---C
Q 042007 765 VQKLQHAKNGVDIVSESRIKTHFARPNWRKVFG-----QLATD-HESSRIGVFYCGSATLTKTLKELC-LEFSLES---P 834 (844)
Q Consensus 765 ~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~-----~~~~~-~~~~~v~V~~CGP~~m~~~vr~~~-~~~~~~~---~ 834 (844)
+.||. .+.+. +.... .+.....||+|||++|++++++.+ .+.+-.. .
T Consensus 181 ---------------------~~g~v--~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~~m~~~v~~~l~~~~G~~~~~i~ 237 (248)
T 1fdr_A 181 ---------------------LTGRI--PALIESGELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRR 237 (248)
T ss_dssp ---------------------EESCH--HHHHHTSHHHHHHTSCCCTTTEEEEEEECHHHHHHHHHHHHHHHCCCBCBTT
T ss_pred ---------------------cceee--ChHHHhhhHHHhhccCCCccCCEEEEeCCHHHHHHHHHHHHHHcCCChHHcC
Confidence 01331 22221 11111 122457899999999999999998 7765431 1
Q ss_pred ceEEEEecCC
Q 042007 835 TRFDFHKENF 844 (844)
Q Consensus 835 ~~~~~h~E~F 844 (844)
..-.++-|.|
T Consensus 238 ~~~~~~~E~~ 247 (248)
T 1fdr_A 238 RPGHMTAEHY 247 (248)
T ss_dssp BCCSEEEEEC
T ss_pred CCccEEEEec
Confidence 2234555554
No 10
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.95 E-value=4.7e-27 Score=249.08 Aligned_cols=231 Identities=16% Similarity=0.221 Sum_probs=170.7
Q ss_pred ccccEEEEEEEEecCCEEEEEEeCCCCCccCCCcEEEEEcCCCCCCCccCcccccCCCCCceEEEEEec--CCchHHHHH
Q 042007 528 LNHKVEVIKAVIYTGNVLALYMTKPPGFKYQSGMYLFVKCPDLSPFEWHPFSITSAPGDYYLSVHIRTL--GDWTTELKQ 605 (844)
Q Consensus 528 ~~~~~~i~~v~~~~~~v~~l~i~~p~~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~~L~~ 605 (844)
.+..++|++++.+++++.++++..|..+.|+||||+.|.+|..+..++|||||+|+|.++.++++||.. |.+|+.|.+
T Consensus 2 ~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~~i~~~~~G~~s~~l~~ 81 (257)
T 2qdx_A 2 NLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQH 81 (257)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSEEEEEEECCTTCTTHHHHTT
T ss_pred ceEEEEEEEEEEcCCCeEEEEEeCCCCCccCCCCEEEEEecCCCCceeeeeEeecCCCCCeEEEEEEEeCCCcchhHHHh
Confidence 356788999999999999999998888899999999999986556789999999999888999999988 889998864
Q ss_pred HHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEe-CccCCCCCCCC-CCCeEEEEEcccchhchHHHH
Q 042007 606 RFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIK-GPYGAPAQDYK-NYDILLLIGLGIGATPFISII 683 (844)
Q Consensus 606 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlVagGiGITp~lsil 683 (844)
+ ++| .++.|. ||||.+..+.. .++++||||||+||||+++++
T Consensus 82 l-----------~~G-------------------------d~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l 125 (257)
T 2qdx_A 82 L-----------KEG-------------------------DELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVI 125 (257)
T ss_dssp C-----------CTT-------------------------CEEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHT
T ss_pred C-----------CCC-------------------------CEEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHH
Confidence 2 356 679999 99999764322 368999999999999999999
Q ss_pred HHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHH-HHhccC----C-CCeEEEEEEEecccCCCCh
Q 042007 684 KDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMD-DIADHD----D-KNVIEMHNYLTSVYEEGDA 757 (844)
Q Consensus 684 ~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~-~l~~~~----~-~~~l~i~~ylT~~~~~~d~ 757 (844)
+++.... ..++++|+|++|+.+++ +|.++|. ++++.. . ..+++++..+|+... ..
T Consensus 126 ~~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~--~~ 186 (257)
T 2qdx_A 126 QDPETYE----------------RYEKVILVHGVRWVSEL-AYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPF--RN 186 (257)
T ss_dssp TCHHHHH----------------HCSEEEEEEEESSGGGC-TTHHHHHTTGGGCTTTHHHHHHHEEEEEEESSSCC--SS
T ss_pred HHHHhcC----------------CCCeEEEEEEcCCHHHh-HhHHHHHHHHHhchhhhccCCCcEEEEEEecCCCc--cc
Confidence 9987542 23689999999999987 6788887 765410 0 136777777765411 00
Q ss_pred hHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH-H----Hhh--CCCCcEEEEEeCChhHHHHHHHHHHhhc
Q 042007 758 RSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ-L----ATD--HESSRIGVFYCGSATLTKTLKELCLEFS 830 (844)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~-~----~~~--~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 830 (844)
.|| +.+.+.+ . ... .......||+|||++|++++++.+.+.+
T Consensus 187 -----------------------------~g~--v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~G 235 (257)
T 2qdx_A 187 -----------------------------QGR--QTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFG 235 (257)
T ss_dssp -----------------------------BSC--HHHHHHHSHHHHHHTCCCCCTTTEEEEEEECHHHHHHHHHHHHHTT
T ss_pred -----------------------------Cce--echhhhhhhHHHhcccccCCcCCCEEEEECCHHHHHHHHHHHHHcC
Confidence 022 1122211 1 100 1123578999999999999999998865
Q ss_pred CCCC----ceEEEEecCC
Q 042007 831 LESP----TRFDFHKENF 844 (844)
Q Consensus 831 ~~~~----~~~~~h~E~F 844 (844)
.+.. ....+|.|.|
T Consensus 236 ~~~~~~~~~~~~i~~E~~ 253 (257)
T 2qdx_A 236 LKISPRMGEPGDYLIERA 253 (257)
T ss_dssp CCBCSSTTSCBSEEEEES
T ss_pred CChHHhcCCCCcEEEeee
Confidence 4321 2335666654
No 11
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.94 E-value=1.4e-26 Score=243.16 Aligned_cols=219 Identities=15% Similarity=0.199 Sum_probs=168.1
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCC---CCccCCCcEEEEEcCCCCCCCccCcccccCCC-CCceEEEEEec--CCchHH
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPP---GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPG-DYYLSVHIRTL--GDWTTE 602 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~-~~~l~l~Ir~~--G~~T~~ 602 (844)
+..++|++++.+++++.++++..|. .+.|+||||+.|.+|..+..++|||||+|.|. ++.++|+||.. |.+|+.
T Consensus 11 ~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~~~~~~l~vk~~~~G~~S~~ 90 (243)
T 2eix_A 11 YKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDDEKGYFDLIIKVYEKGQMSQY 90 (243)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCTTCHHHHH
T ss_pred eEEEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEEEeeCCCEEEeeeeecCCCCCCCEEEEEEEEcCCCCcchH
Confidence 4678899999999999999998764 46799999999999854456899999999985 57899999997 889988
Q ss_pred HHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHH
Q 042007 603 LKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISI 682 (844)
Q Consensus 603 L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsi 682 (844)
|.++ ++| .++.|.||||.+..+...++++||||||+||||++++
T Consensus 91 l~~l-----------~~G-------------------------d~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~ 134 (243)
T 2eix_A 91 IDHL-----------NPG-------------------------DFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQV 134 (243)
T ss_dssp HHTC-----------CTT-------------------------CEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHH
T ss_pred hhcC-----------CCC-------------------------CEEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHH
Confidence 8642 356 6799999999976544457899999999999999999
Q ss_pred HHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHH
Q 042007 683 IKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALI 762 (844)
Q Consensus 683 l~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~ 762 (844)
++++..+. ....+++|+|++|+.+++ +|.++|+++++.. .+++++..+++..+..
T Consensus 135 l~~l~~~~---------------~~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~------- 189 (243)
T 2eix_A 135 ARAIIKNP---------------KEKTIINLIFANVNEDDI-LLRTELDDMAKKY--SNFKVYYVLNNPPAGW------- 189 (243)
T ss_dssp HHHHHTCT---------------TCCCEEEEEEEEEEGGGC-TTHHHHHHHHHHC--TTEEEEEEEEECCTTC-------
T ss_pred HHHHHhCC---------------CCCcEEEEEEEcCCHHHh-hHHHHHHHHHHHC--CCeEEEEEeCCCCccc-------
Confidence 99987531 034789999999999987 8888998887643 2577877776532110
Q ss_pred HHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcC
Q 042007 763 AMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSL 831 (844)
Q Consensus 763 ~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 831 (844)
.| ..||.+. +++++.... ...+..||+|||++|++++++.+.+.+.
T Consensus 190 ----------------~g-----~~g~v~~-~~l~~~~~~-~~~~~~vy~CGp~~m~~~v~~~l~~~G~ 235 (243)
T 2eix_A 190 ----------------TG-----GVGFVSA-DMIKQHFSP-PSSDIKVMMCGPPMMNKAMQGHLETLGY 235 (243)
T ss_dssp ----------------CS-----EESSCCH-HHHHHHSCC-TTSSEEEEEESSHHHHHHHHHHHHHHTC
T ss_pred ----------------cC-----cCCccCH-HHHHHhcCC-CCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 01 1266653 234443322 1235789999999999999999987654
No 12
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.94 E-value=1.2e-26 Score=250.42 Aligned_cols=232 Identities=18% Similarity=0.354 Sum_probs=172.6
Q ss_pred ccccEEEEEEEEecCCEEEEEEeCCC--CCccCCCcEEEEEcCCC-----------------------------CCCCcc
Q 042007 528 LNHKVEVIKAVIYTGNVLALYMTKPP--GFKYQSGMYLFVKCPDL-----------------------------SPFEWH 576 (844)
Q Consensus 528 ~~~~~~i~~v~~~~~~v~~l~i~~p~--~~~~~pGQyv~l~~p~~-----------------------------s~~e~H 576 (844)
....++|++++.+++++.++++..|. .+.|+|||||.|.+|.. ...++|
T Consensus 8 ~~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R 87 (290)
T 2r6h_A 8 KEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVR 87 (290)
T ss_dssp CEEEEEEEEEEESSSSEEEEEEECSTTCCCCCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEE
T ss_pred eEEEEEEEEeeecCCCeEEEEEEcCCCCccccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcce
Confidence 34568899999999999999999875 67899999999999852 246789
Q ss_pred CcccccCCCC-CceEEEEEe-----------------cCCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccc
Q 042007 577 PFSITSAPGD-YYLSVHIRT-----------------LGDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANF 638 (844)
Q Consensus 577 PFTI~s~p~~-~~l~l~Ir~-----------------~G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 638 (844)
||||+|+|.+ +.++|+||. .|.+|+.|.++ ++|
T Consensus 88 ~ySi~s~~~~~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l-----------~~G------------------ 138 (290)
T 2r6h_A 88 AYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSL-----------KPG------------------ 138 (290)
T ss_dssp EEECCSCTTCCSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTC-----------CTT------------------
T ss_pred eeeccCCCCCCCEEEEEEEEeccccccccccccccCCCcchhhHHhcC-----------CCC------------------
Confidence 9999999974 789999996 47788888762 356
Q ss_pred cccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeC
Q 042007 639 EQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTR 718 (844)
Q Consensus 639 ~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R 718 (844)
.+|.|.||||.+..+ ..++++||||||+||||++|+|++++.... ..++++|+|++|
T Consensus 139 -------d~v~v~gP~G~f~~~-~~~~~~vliagGtGitP~~s~l~~~~~~~~---------------~~~~v~l~~~~r 195 (290)
T 2r6h_A 139 -------DKVMMSGPYGDFHIQ-DTDAEMLYIGGGAGMAPLRAQILHLFRTLK---------------TGRKVSYWYGAR 195 (290)
T ss_dssp -------CEEEEEEEECCCCCC-SSSCEEEEEEEGGGHHHHHHHHHHHHHTSC---------------CCSCEEEEEEES
T ss_pred -------CEEEEEecccCCcCC-CCCCeEEEEECccCHHHHHHHHHHHHHhcC---------------CCCcEEEEEEcC
Confidence 679999999998753 467899999999999999999999876421 246899999999
Q ss_pred CCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH
Q 042007 719 EQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ 798 (844)
Q Consensus 719 ~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~ 798 (844)
+.+++ +|.++|.++++.. ..++++.++++...+... .| ..||.+ +.++++
T Consensus 196 ~~~d~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~~---------------------~g-----~~g~v~-~~~~~~ 245 (290)
T 2r6h_A 196 SKNEI-FYEEDFREIEREF--PNFKFHIALSDPQPEDNW---------------------TG-----YVGFIH-QVIYDN 245 (290)
T ss_dssp SGGGC-CSHHHHHHHHHHC--TTEEEEEEESSCCGGGCC---------------------CS-----CBSCHH-HHHHHH
T ss_pred CHHHH-HHHHHHHHHHHhC--CCeEEEEEEccCCcccCC---------------------CC-----eeEecC-HHHHHh
Confidence 99987 8888898887543 257888777753211000 01 124432 122233
Q ss_pred HHhhCC-CCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEecCC
Q 042007 799 LATDHE-SSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHKENF 844 (844)
Q Consensus 799 ~~~~~~-~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~E~F 844 (844)
...... ..+..||+|||++|++++++.+.+.+.. .-.+|.|.|
T Consensus 246 ~l~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~G~~---~~~i~~e~F 289 (290)
T 2r6h_A 246 YLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVP---RNMLFFDDF 289 (290)
T ss_dssp TTTTCSCGGGEEEEEECCHHHHHHHHHHHHHHTCC---GGGEEEECC
T ss_pred HHhhccCcCCcEEEEECCHHHHHHHHHHHHHcCCC---HHHEEeccc
Confidence 222211 2357899999999999999999876532 235777877
No 13
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.94 E-value=1.8e-26 Score=246.75 Aligned_cols=229 Identities=16% Similarity=0.205 Sum_probs=170.3
Q ss_pred ccEEEEEEEEecCCEEEEEEeCCCCCccCCCcEEEEEcCCC-CCCCccCcccccCCCCCceEEEEEec--CCchHHHHHH
Q 042007 530 HKVEVIKAVIYTGNVLALYMTKPPGFKYQSGMYLFVKCPDL-SPFEWHPFSITSAPGDYYLSVHIRTL--GDWTTELKQR 606 (844)
Q Consensus 530 ~~~~i~~v~~~~~~v~~l~i~~p~~~~~~pGQyv~l~~p~~-s~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~~L~~~ 606 (844)
..++|++++.+++++.++++..|..+.|+||||++|.+|.. +..++|||||+|.|.++.++|+||.. |.+|+.|.++
T Consensus 17 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~~~~~l~v~~~~~G~~s~~l~~l 96 (272)
T 2bgi_A 17 DAQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFYSIKVPDGPLTSRLQHI 96 (272)
T ss_dssp EEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEECTTSCEEEEEEECCSCTTCSEEEEEEECCTTCTTHHHHTTC
T ss_pred EEEEEEEEEEcCCCEEEEEEeCCCCCccCCCCEEEEEeccCCCCeeeeeeeeccCCCCCeEEEEEEEccCCCchhHHHhC
Confidence 56889999999999999999988888999999999999864 45689999999999888999999998 9999988632
Q ss_pred HHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEe-CccCCCCCCCC-CCCeEEEEEcccchhchHHHHH
Q 042007 607 FEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIK-GPYGAPAQDYK-NYDILLLIGLGIGATPFISIIK 684 (844)
Q Consensus 607 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlVagGiGITp~lsil~ 684 (844)
++| .++.|. ||||.+..+.. .++++||||||+||||++++++
T Consensus 97 -----------~~G-------------------------d~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~ 140 (272)
T 2bgi_A 97 -----------KVG-------------------------EQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMR 140 (272)
T ss_dssp -----------CTT-------------------------CEEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTT
T ss_pred -----------CCC-------------------------CEEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHH
Confidence 356 679999 99999764322 3689999999999999999998
Q ss_pred HHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHH-HHhc-----cCCCCeEEEEEEEecccCCCChh
Q 042007 685 DLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMD-DIAD-----HDDKNVIEMHNYLTSVYEEGDAR 758 (844)
Q Consensus 685 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~-~l~~-----~~~~~~l~i~~ylT~~~~~~d~~ 758 (844)
++.... ..++++|+|++|+.+++ +|.++|. ++++ ......++++..+|+... .
T Consensus 141 ~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~--~-- 199 (272)
T 2bgi_A 141 EPEAYE----------------KFDEVIMMHACRTVAEL-EYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEF--H-- 199 (272)
T ss_dssp CGGGGT----------------SCSEEEEEEEESSSGGG-HHHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCC--S--
T ss_pred HHHhcC----------------CCCcEEEEEEeCCHHHh-hHHHHHHHHHHhcchhhcccCCcEEEEEEecCCcc--c--
Confidence 875431 24789999999999998 7888898 8765 110246777777765310 0
Q ss_pred HHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHH-----HHHhh--CCCCcEEEEEeCChhHHHHHHHHHHhhcC
Q 042007 759 SALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFG-----QLATD--HESSRIGVFYCGSATLTKTLKELCLEFSL 831 (844)
Q Consensus 759 ~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~-----~~~~~--~~~~~v~V~~CGP~~m~~~vr~~~~~~~~ 831 (844)
+.||. .+.+. +.... .......||+|||++|++++++.+.+.+.
T Consensus 200 ---------------------------~~g~v--~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~G~ 250 (272)
T 2bgi_A 200 ---------------------------HMGRI--TDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGL 250 (272)
T ss_dssp ---------------------------SBCCH--HHHHHSCHHHHHHTCCCCCTTTEEEEEEECHHHHHHHHHHHHTTTC
T ss_pred ---------------------------cCcee--chHHHhhhHhhhcccccCCCCCcEEEEECCHHHHHHHHHHHHHcCC
Confidence 01221 12111 11000 11235789999999999999999987654
Q ss_pred CCC---ceEEEEecCC
Q 042007 832 ESP---TRFDFHKENF 844 (844)
Q Consensus 832 ~~~---~~~~~h~E~F 844 (844)
... ..-.+|.|.|
T Consensus 251 ~~~~i~~~~~i~~E~f 266 (272)
T 2bgi_A 251 REGANSEPREFVVEKA 266 (272)
T ss_dssp CBCBTTBCBSEEEEES
T ss_pred ChHHcCCccceEeeee
Confidence 321 2346777765
No 14
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.94 E-value=1.1e-26 Score=256.38 Aligned_cols=223 Identities=14% Similarity=0.253 Sum_probs=169.6
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCC---CCccCCCcEEEEEcCCCCCCCccCcccccCCCCCceEEEEEec--CCchHHH
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPP---GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPGDYYLSVHIRTL--GDWTTEL 603 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~~L 603 (844)
...++|++++.+++++.++++..|. .+.|+||||++|.+|.. .++|||||+|.|.++.++|+||.. |.+|+.|
T Consensus 108 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~l~~~vk~~~~G~~S~~L 185 (338)
T 1krh_A 108 HFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPGNRLTGFVVRNVPQGKMSEYL 185 (338)
T ss_dssp EEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTTCSEEEEEEECCTTCHHHHHH
T ss_pred EEEEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEEcCCC--CccccccccCCCCCCeEEEEEEEcCCCCchhhH
Confidence 4577899999999999999999876 57899999999999864 489999999999888999999999 8899998
Q ss_pred HHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHH
Q 042007 604 KQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISII 683 (844)
Q Consensus 604 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil 683 (844)
.+.+ ++| .++.|+||||.+..+. ..+++||||||+||||++|++
T Consensus 186 ~~~l----------~~G-------------------------d~v~v~gP~G~f~~~~-~~~~~vliagGtGiaP~~s~l 229 (338)
T 1krh_A 186 SVQA----------KAG-------------------------DKMSFTGPFGSFYLRD-VKRPVLMLAGGTGIAPFLSML 229 (338)
T ss_dssp HTTC----------CTT-------------------------CEEEEEEEECSCSCCC-CSSCEEEEEEGGGHHHHHHHH
T ss_pred hhcc----------CCC-------------------------CEEEEECCccceEeCC-CCceEEEEEccccHhHHHHHH
Confidence 7533 355 6799999999986533 348899999999999999999
Q ss_pred HHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHH
Q 042007 684 KDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIA 763 (844)
Q Consensus 684 ~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~ 763 (844)
+++.... ..++++|+|++|+.+++ +|.++|.++++.. .+++++.++++......
T Consensus 230 ~~l~~~~----------------~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~------- 283 (338)
T 1krh_A 230 QVLEQKG----------------SEHPVRLVFGVTQDCDL-VALEQLDALQQKL--PWFEYRTVVAHAESQHE------- 283 (338)
T ss_dssp HHHHHHC----------------CSSCEEEEEEESSGGGC-CCHHHHHHHHHHC--TTEEEEEEETTCCSSSS-------
T ss_pred HHHHHcC----------------CCCeEEEEEEeCCHHHh-hhHHHHHHHHHhC--CCeEEEEEEecCCCCCC-------
Confidence 9998652 24689999999999998 8888898887543 35788877776321100
Q ss_pred HHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEecC
Q 042007 764 MVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHKEN 843 (844)
Q Consensus 764 ~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~E~ 843 (844)
+.||.+ +.+.++.... .+..||+|||++|++++++.+.+.+.+ .-.+|.|.
T Consensus 284 ----------------------~~g~v~-~~l~~~~~~~---~~~~vy~CGp~~m~~~v~~~l~~~G~~---~~~i~~e~ 334 (338)
T 1krh_A 284 ----------------------RKGYVT-GHIEYDWLNG---GEVDVYLCGPVPMVEAVRSWLDTQGIQ---PANFLFEK 334 (338)
T ss_dssp ----------------------EESCSG-GGCCGGGGGG---GCSEEEEEEEHHHHHHHHHHHHHHTCC---CSEEEEEE
T ss_pred ----------------------ccCccC-HHHHHhhccc---CCcEEEEECCHHHHHHHHHHHHHcCCC---HHHEEEEe
Confidence 012221 0010011111 134799999999999999999876432 34677777
Q ss_pred C
Q 042007 844 F 844 (844)
Q Consensus 844 F 844 (844)
|
T Consensus 335 F 335 (338)
T 1krh_A 335 F 335 (338)
T ss_dssp E
T ss_pred e
Confidence 6
No 15
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.94 E-value=2.3e-25 Score=243.84 Aligned_cols=211 Identities=17% Similarity=0.271 Sum_probs=163.4
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCCC---CccCCCcEEEEEcCCCCCCCccCcccccCCCC-CceEEEEEec--CC-chH
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPPG---FKYQSGMYLFVKCPDLSPFEWHPFSITSAPGD-YYLSVHIRTL--GD-WTT 601 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~~---~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~-~~l~l~Ir~~--G~-~T~ 601 (844)
+..++|++++.+++++.++++..|.. ..|+||||+.|.+|.. ++|||||+|+|.+ +.++|+||.. |. +|+
T Consensus 8 ~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~g---~~R~ySi~s~~~~~~~l~i~Vk~~~~G~g~S~ 84 (321)
T 2pia_A 8 FLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPNG---SRRTYSLCNDSQERNRYVIAVKRDSNGRGGSI 84 (321)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTTS---CEEEEECCSCTTCCSEEEEEEECCTTSCSHHH
T ss_pred cEEEEEEEEEEcCCCEEEEEEEcCCCCcCCCCCCCCEEEEECCCC---CcEEEEeCCCCCCCCeEEEEEEEecCCcchhH
Confidence 46788999999999999999998764 3799999999999863 8999999999875 6899999977 55 899
Q ss_pred HHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHH
Q 042007 602 ELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFIS 681 (844)
Q Consensus 602 ~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~ls 681 (844)
.|.+.+ ++| .++.|.||||.+..+ ..++++|||||||||||++|
T Consensus 85 ~L~~~l----------~~G-------------------------d~v~v~gP~g~f~l~-~~~~~~vliagG~GItP~~s 128 (321)
T 2pia_A 85 SFIDDT----------SEG-------------------------DAVEVSLPRNEFPLD-KRAKSFILVAGGIGITPMLS 128 (321)
T ss_dssp HHHHSC----------CTT-------------------------CEEEECCCBCCSCCC-TTCSEEEEEEEGGGHHHHHH
T ss_pred HHHhcC----------CCC-------------------------CEEEEeCCccccccC-CCCCCEEEEEecccHhHHHH
Confidence 998543 356 689999999987653 24789999999999999999
Q ss_pred HHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHH
Q 042007 682 IIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSAL 761 (844)
Q Consensus 682 il~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~ 761 (844)
+++++.... ..+++|+|++|+.+++ +|.++|.+++. ...+++ +.+.. +
T Consensus 129 ~l~~l~~~~-----------------~~~v~l~~~~r~~~~~-~~~~el~~l~~---~~~~~~--~~~~~----~----- 176 (321)
T 2pia_A 129 MARQLRAEG-----------------LRSFRLYYLTRDPEGT-AFFDELTSDEW---RSDVKI--HHDHG----D----- 176 (321)
T ss_dssp HHHHHHHHC-----------------SSEEEEEEEESCGGGC-TTHHHHHSTTT---TTTEEE--EECTT----C-----
T ss_pred HHHHHHHcC-----------------CCcEEEEEEECChhhh-HHHHHHhcCcc---CCeEEE--EECCC----c-----
Confidence 999997641 2689999999999987 77787876641 234444 33221 0
Q ss_pred HHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEe
Q 042007 762 IAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHK 841 (844)
Q Consensus 762 ~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~ 841 (844)
..||+++.++++. . .....||+|||++|++++++.+.++. .-.+|.
T Consensus 177 ------------------------~~g~~~~~~ll~~----~-~~~~~vyvCGP~~m~~~v~~~l~~~~-----~~~i~~ 222 (321)
T 2pia_A 177 ------------------------PTKAFDFWSVFEK----S-KPAQHVYCCGPQALMDTVRDMTGHWP-----SGTVHF 222 (321)
T ss_dssp ------------------------TTSCCCHHHHHSS----C-CTTEEEEEESCHHHHHHHHHHTTTSC-----TTCEEE
T ss_pred ------------------------ccCccCHHHHhcc----c-CCCCEEEEECCHHHHHHHHHHHHhCC-----HhhEEE
Confidence 0167777665543 2 23578999999999999999987722 235777
Q ss_pred cCC
Q 042007 842 ENF 844 (844)
Q Consensus 842 E~F 844 (844)
|.|
T Consensus 223 E~F 225 (321)
T 2pia_A 223 ESF 225 (321)
T ss_dssp ECC
T ss_pred Eec
Confidence 776
No 16
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.1e-26 Score=230.04 Aligned_cols=180 Identities=33% Similarity=0.684 Sum_probs=130.0
Q ss_pred EEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHH
Q 042007 648 ILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFK 727 (844)
Q Consensus 648 v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~ 727 (844)
|.|+||||.+..+...++++|||||||||||++|++++++....... .....++|+|+|++|+.+++.||.
T Consensus 1 v~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~---------~~~~~~~v~l~~~~r~~~~~~w~~ 71 (186)
T 3a1f_A 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNA---------TNLKLKKIYFYWLCRDTHAFEWFA 71 (186)
T ss_dssp CCTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCT---------TCCCCCEEEEEEEESCTTTTHHHH
T ss_pred CeEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcc---------cCCCCcEEEEEEEECCcchHHHHH
Confidence 35789999986545678999999999999999999999987643211 011468999999999999999999
Q ss_pred HHHHHHhccC----CCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhC
Q 042007 728 GVMDDIADHD----DKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDH 803 (844)
Q Consensus 728 ~~L~~l~~~~----~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~ 803 (844)
++|+++++.. ....+++++|+|+..+. +.... +. ++ +.+.+..+|..+.++.||||++.+++.+....
T Consensus 72 ~~l~~l~~~~~~~~~~~~~~~~~~~t~~~~~-~~~~~---~~---~~-~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~ 143 (186)
T 3a1f_A 72 DLLQLLESQMQERNNAGFLSYNIYLTGWDES-QANHF---AV---HH-DEEKDVITGLKQKTLYGRPNWDNEFKTIASQH 143 (186)
T ss_dssp HHHHHHHHHHHHTTCTTSEEEEEEETTC-------------------------------CCEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhccCCCeEEEEEEEcCCCCC-cccce---ee---cc-ccccccCCCCccccccCCCCHHHHHHHHHHhC
Confidence 9999887541 13368999999975322 11110 00 10 11223345556678889999999999887765
Q ss_pred CCCcEEEEEeCChhHHHHHHHHHHhhcC--CCCceEEEEecCC
Q 042007 804 ESSRIGVFYCGSATLTKTLKELCLEFSL--ESPTRFDFHKENF 844 (844)
Q Consensus 804 ~~~~v~V~~CGP~~m~~~vr~~~~~~~~--~~~~~~~~h~E~F 844 (844)
++.++.||+|||++|++++++++.+.+. +...+++||+|+|
T Consensus 144 ~~~~~~v~~CGP~~m~~~v~~~l~~~g~~~~~~~~~~~~~E~F 186 (186)
T 3a1f_A 144 PNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF 186 (186)
T ss_dssp TTCEEEEEEESCHHHHHHHHHHHHHTCCCSTTCCEEEEECCCC
T ss_pred CCCcEEEEEeCCHHHHHHHHHHHHHhhccCCCCCEEEEEeccC
Confidence 5457899999999999999999999876 3567899999999
No 17
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.93 E-value=7.5e-26 Score=255.11 Aligned_cols=232 Identities=13% Similarity=0.203 Sum_probs=174.3
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCCC---CccCCCcEEEEEcCCCC--CCCccCcccccCCCCCceEEEEEec--CCchH
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPPG---FKYQSGMYLFVKCPDLS--PFEWHPFSITSAPGDYYLSVHIRTL--GDWTT 601 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~~---~~~~pGQyv~l~~p~~s--~~e~HPFTI~s~p~~~~l~l~Ir~~--G~~T~ 601 (844)
+..++|++++.+++++.++++..|.+ ..|+||||+.|.+|..+ ..++|||||+|+|.++.++|+||.. |.+|+
T Consensus 152 ~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~~~~~i~Vk~~~~G~~S~ 231 (396)
T 1gvh_A 152 TRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSN 231 (396)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCCSSCEEEEEECCTTCHHHH
T ss_pred cEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEEEecCCCCccceeecceeccCCCCCeEEEEEEEcCCCcchH
Confidence 35788999999999999999987643 58999999999998433 3689999999999888999999998 88999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHH
Q 042007 602 ELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFIS 681 (844)
Q Consensus 602 ~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~ls 681 (844)
.|.+.+ ++| .++.|.||||.+..+....+.+||||||+||||++|
T Consensus 232 ~L~~~l----------~~G-------------------------d~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s 276 (396)
T 1gvh_A 232 WLHNHA----------NVG-------------------------DVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLA 276 (396)
T ss_dssp HHHHTC----------CTT-------------------------CEEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHH
T ss_pred HHHhcC----------CCC-------------------------CEEEEEcCCcceECCCCCCCCEEEEecchhHhHHHH
Confidence 998743 456 689999999987644345789999999999999999
Q ss_pred HHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHH
Q 042007 682 IIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSAL 761 (844)
Q Consensus 682 il~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~ 761 (844)
+++++.... ..++++|+|++|+.+++ +|.++|+++++.. .+++++.++++..++ ..
T Consensus 277 ~l~~l~~~~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~----~~- 332 (396)
T 1gvh_A 277 MLDTLAKAG----------------HTAQVNWFHAAENGDVH-AFADEVKELGQSL--PRFTAHTWYRQPSEA----DR- 332 (396)
T ss_dssp HHHHHHHHT----------------CCSCEEEEEEESCTTTC-CSHHHHHHHHHTS--SSEEEEEEESSCCHH----HH-
T ss_pred HHHHHHhcC----------------CCCcEEEEEEeCCHHHh-hhHHHHHHHHHHC--CCeEEEEEECCCCcc----cc-
Confidence 999998652 34789999999999987 7888898887643 357888777653210 00
Q ss_pred HHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEe
Q 042007 762 IAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHK 841 (844)
Q Consensus 762 ~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~ 841 (844)
.+. ...+.||.+...+ .+.. ..+ +..||+|||++|++++++.+.+.+.+ .-.+|.
T Consensus 333 -----------~~~-------~~~~~G~~~~~~l-~~~~-~~~--~~~vyvCGp~~m~~~v~~~L~~~Gv~---~~~i~~ 387 (396)
T 1gvh_A 333 -----------AKG-------QFDSEGLMDLSKL-EGAF-SDP--TMQFYLCGPVGFMQFTAKQLVDLGVK---QENIHY 387 (396)
T ss_dssp -----------HHT-------CCSEESSCCGGGS-SSCC-CCT--TCEEEEESCHHHHHHHHHHHHHTTCC---GGGEEE
T ss_pred -----------ccC-------ccCccCcCCHHHH-hhcc-CCC--CCEEEEeCCHHHHHHHHHHHHHcCCC---HHHEEE
Confidence 000 0112367664321 1100 111 45799999999999999999876532 234688
Q ss_pred cCC
Q 042007 842 ENF 844 (844)
Q Consensus 842 E~F 844 (844)
|.|
T Consensus 388 E~F 390 (396)
T 1gvh_A 388 ECF 390 (396)
T ss_dssp ECS
T ss_pred ecc
Confidence 877
No 18
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.93 E-value=1.6e-25 Score=252.92 Aligned_cols=231 Identities=14% Similarity=0.225 Sum_probs=174.1
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCCC---CccCCCcEEEEEcCCC-C-CCCccCcccccCCCCCceEEEEEec-------
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPPG---FKYQSGMYLFVKCPDL-S-PFEWHPFSITSAPGDYYLSVHIRTL------- 596 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~~---~~~~pGQyv~l~~p~~-s-~~e~HPFTI~s~p~~~~l~l~Ir~~------- 596 (844)
+..++|++++.+++++.++++..|.+ ..|+||||+.|++|.. . ..++|||||+|+|+++.++|+||..
T Consensus 154 ~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~~~~~i~Vk~~~~~~~~~ 233 (403)
T 1cqx_A 154 WRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRTYRISVKREGGGPQPP 233 (403)
T ss_dssp CEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCCSSCEEEEEECCCBTTBCC
T ss_pred ceeEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCcceeecceecCCCCCCeEEEEEEECCCCCCCC
Confidence 35788999999999999999987643 4799999999999832 2 2579999999999888999999998
Q ss_pred CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccch
Q 042007 597 GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGA 676 (844)
Q Consensus 597 G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGI 676 (844)
|.+|+.|.+.+ ++| .++.|.||||.+..+....+.+||||||+||
T Consensus 234 G~~S~~L~~~l----------~~G-------------------------d~v~v~gP~G~f~l~~~~~~~~vlIagGtGi 278 (403)
T 1cqx_A 234 GYVSNLLHDHV----------NVG-------------------------DQVKLAAPYGSFHIDVDAKTPIVLISGGVGL 278 (403)
T ss_dssp CHHHHHHHHHC----------CTT-------------------------CEEEECCCBCSCSCCTTCCSCEEEEESSCCH
T ss_pred CeehHHHhhCC----------CCC-------------------------CEEEEecCccCcccCCCCCCCEEEEEecccH
Confidence 66899998643 456 6899999999876443457899999999999
Q ss_pred hchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCC
Q 042007 677 TPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGD 756 (844)
Q Consensus 677 Tp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d 756 (844)
||++|+++++.. . ..++++|+|++|+.+++ +|.++|+++++.. .++++++++++..+...
T Consensus 279 tP~~s~l~~l~~-~----------------~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~ 338 (403)
T 1cqx_A 279 TPMVSMLKVALQ-A----------------PPRQVVFVHGARNSAVH-AMRDRLREAAKTY--ENLDLFVFYDQPLPEDV 338 (403)
T ss_dssp HHHHHHHHHHTC-S----------------SCCCEEEEEEESCSSSC-HHHHHHHHHHHHC--TTEEEEEEESSCCTTCC
T ss_pred hhHHHHHHHHHh-C----------------CCCcEEEEEEeCChhhC-cHHHHHHHHHHhC--CCcEEEEEECCCCcccc
Confidence 999999999864 1 24789999999999987 7899999887643 24778877765432110
Q ss_pred hhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCce
Q 042007 757 ARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTR 836 (844)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~ 836 (844)
.+. ...+.||.+... +.+.. ..+ +..||+|||++|++++++.+.+.+.+ .
T Consensus 339 ----------------~~~-------~~~~~G~i~~~~-l~~~~-~~~--~~~vyvCGp~~m~~~v~~~L~~~Gv~---~ 388 (403)
T 1cqx_A 339 ----------------QGR-------DYDYPGLVDVKQ-IEKSI-LLP--DADYYICGPIPFMRMQHDALKNLGIH---E 388 (403)
T ss_dssp ----------------BTT-------TBSEESSCCGGG-SHHHH-CCT--TCEEEEESSHHHHHHHHHHHHHTTCC---G
T ss_pred ----------------ccc-------ccCcCCCcCHHH-Hhhcc-CCC--CCEEEEeCCHHHHHHHHHHHHHcCCC---H
Confidence 000 112337777543 23321 112 45799999999999999999876542 2
Q ss_pred EEEEecCC
Q 042007 837 FDFHKENF 844 (844)
Q Consensus 837 ~~~h~E~F 844 (844)
-.+|.|.|
T Consensus 389 ~~i~~E~F 396 (403)
T 1cqx_A 389 ARIHYEVF 396 (403)
T ss_dssp GGEEECCC
T ss_pred HHeEEeee
Confidence 34688877
No 19
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.93 E-value=2.7e-25 Score=241.53 Aligned_cols=225 Identities=15% Similarity=0.199 Sum_probs=162.3
Q ss_pred ccEEEEEEEEecC-----CEEEEEEeCCC-CCccCCCcEEEEEcCCCC----CCCccCcccccCCC-----CCceEEEEE
Q 042007 530 HKVEVIKAVIYTG-----NVLALYMTKPP-GFKYQSGMYLFVKCPDLS----PFEWHPFSITSAPG-----DYYLSVHIR 594 (844)
Q Consensus 530 ~~~~i~~v~~~~~-----~v~~l~i~~p~-~~~~~pGQyv~l~~p~~s----~~e~HPFTI~s~p~-----~~~l~l~Ir 594 (844)
..++|++++.+++ ++.+++|..|. .+.|+||||+.|.+|... ++++|||||+|+|. ++.++|+||
T Consensus 22 ~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~Vk 101 (304)
T 2bmw_A 22 FIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVR 101 (304)
T ss_dssp EEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEE
T ss_pred EEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEEE
Confidence 4578888998887 89999998764 578999999999998752 36899999999985 578999999
Q ss_pred e------------cCCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCC-CC
Q 042007 595 T------------LGDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQ-DY 661 (844)
Q Consensus 595 ~------------~G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~ 661 (844)
. .|.+|+.|.++ ++| ..+.|+||||.+.. +.
T Consensus 102 ~~~y~~~~~~~~~~G~~S~~L~~l-----------~~G-------------------------d~v~v~gP~G~~~~~~~ 145 (304)
T 2bmw_A 102 QLEYKHPESGETVYGVCSTYLTHI-----------EPG-------------------------SEVKITGPVGKEMLLPD 145 (304)
T ss_dssp CCEECSSSSSSCEECHHHHHHHTC-----------CTT-------------------------CEEEEEEEECSSSCCCS
T ss_pred EEEeeccccCcCCCcchhhHHhcC-----------CCC-------------------------CEEEEEeccCCceeCCC
Confidence 7 47799988763 356 67999999998642 22
Q ss_pred CCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCe
Q 042007 662 KNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNV 741 (844)
Q Consensus 662 ~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~ 741 (844)
..++++||||||+||||++|+|++++....... ........+++|+|++|+.+++ +|.++|+++++.. ...
T Consensus 146 ~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~-------~~~~~~~~~v~l~~g~r~~~d~-~~~~el~~~~~~~-~~~ 216 (304)
T 2bmw_A 146 DPEANVIMLAGGTGITPMRTYLWRMFKDAERAA-------NPEYQFKGFSWLVFGVPTTPNI-LYKEELEEIQQKY-PDN 216 (304)
T ss_dssp CTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHH-------CTTCCCCSCEEEEEEESSGGGC-TTHHHHHHHHHHC-TTT
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHHhhhhhc-------ccccccCCCEEEEEEeCChHhc-chHHHHHHHHHhC-CCc
Confidence 346899999999999999999999876532100 0000013679999999999887 8889998887542 235
Q ss_pred EEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH----HHhhCCCCcEEEEEeCChh
Q 042007 742 IEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ----LATDHESSRIGVFYCGSAT 817 (844)
Q Consensus 742 l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~----~~~~~~~~~v~V~~CGP~~ 817 (844)
++++..+|+..+..+ .+|..+.+.+.+ +.+..+.....||+|||++
T Consensus 217 ~~~~~~~s~~~~~~~------------------------------~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~~ 266 (304)
T 2bmw_A 217 FRLTYAISREQKNPQ------------------------------GGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPP 266 (304)
T ss_dssp EEEEEEETTTCBCTT------------------------------SSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECTT
T ss_pred EEEEEEEcCCCCCCC------------------------------CCcceehHHHHHhHHHHHHHhhcCCcEEEEECCHH
Confidence 778777776421100 023333333332 1111122356899999999
Q ss_pred HHHHHHHHHHhh
Q 042007 818 LTKTLKELCLEF 829 (844)
Q Consensus 818 m~~~vr~~~~~~ 829 (844)
|+++|++++.+.
T Consensus 267 m~~~v~~~l~~~ 278 (304)
T 2bmw_A 267 MEEGIDAALSAA 278 (304)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999887654
No 20
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.93 E-value=8.5e-26 Score=241.80 Aligned_cols=220 Identities=11% Similarity=0.183 Sum_probs=164.1
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCC---CCccCCCcEEEEEcCCCCCCCccCcccccCCC-CCceEEEEEec--------
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPP---GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPG-DYYLSVHIRTL-------- 596 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~-~~~l~l~Ir~~-------- 596 (844)
+..++|++++.+++++.++++..|. .+.|+|||||.|.+|..+..++|||||+|+|. ++.++|+||..
T Consensus 16 ~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~l~vk~~~~~~~~~~ 95 (275)
T 1umk_A 16 KYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKF 95 (275)
T ss_dssp CEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTTCCSEEEEEEECCCSSSBTTB
T ss_pred cEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccCCCCeEEEEEEEeccCccccc
Confidence 4678899999999999999998764 36899999999999765567899999999986 57899999987
Q ss_pred ---CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCC--------C-----
Q 042007 597 ---GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQ--------D----- 660 (844)
Q Consensus 597 ---G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~--------~----- 660 (844)
|.+|+.|.++ ++| .+|.|.||||.+.. +
T Consensus 96 ~~~G~~S~~L~~l-----------~~G-------------------------d~v~v~gP~G~~~~~~~~~f~l~~~~~~ 139 (275)
T 1umk_A 96 PAGGKMSQYLESM-----------QIG-------------------------DTIEFRGPSGLLVYQGKGKFAIRPDKKS 139 (275)
T ss_dssp TTCCHHHHHHHHC-----------CTT-------------------------CEEEEEEEECSEEEEETTEEEECSSTTS
T ss_pred CCCChhHHHHhcC-----------CCC-------------------------CEEEEEcCccceEecCCccccccccccc
Confidence 8899999643 356 67999999998631 0
Q ss_pred ---CCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccC
Q 042007 661 ---YKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHD 737 (844)
Q Consensus 661 ---~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~ 737 (844)
...++++||||||+||||++++++++.... ....+++|+|++|+.+++ +|.++|+++++..
T Consensus 140 ~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~---------------~~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~ 203 (275)
T 1umk_A 140 NPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDP---------------DDHTVCHLLFANQTEKDI-LLRPELEELRNKH 203 (275)
T ss_dssp CCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCT---------------TCCCEEEEEEEESSGGGC-TTHHHHHHHHHHC
T ss_pred cccccCCceEEEEecCccHhHHHHHHHHHHhCC---------------CCCcEEEEEEEcCCHHHh-hHHHHHHHHHHhC
Confidence 124689999999999999999999987531 035789999999999987 8889999887643
Q ss_pred CCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChh
Q 042007 738 DKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSAT 817 (844)
Q Consensus 738 ~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~ 817 (844)
. +.++++..+++..+ +. .-+.||.+- .++++..... .....||+|||++
T Consensus 204 ~-~~~~~~~~~s~~~~--~~--------------------------~~~~g~v~~-~~l~~~l~~~-~~~~~vyvCGp~~ 252 (275)
T 1umk_A 204 S-ARFKLWYTLDRAPE--AW--------------------------DYGQGFVNE-EMIRDHLPPP-EEEPLVLMCGPPP 252 (275)
T ss_dssp T-TTEEEEEEESSCCS--SC--------------------------SSEESSCCH-HHHHHHSCCG-GGCCEEEEESCHH
T ss_pred c-CcEEEEEEEcCCCc--cc--------------------------cCccCccCH-HHHHHhcCCC-CCCeEEEEECCHH
Confidence 2 25666554443211 00 011266663 2344433211 1245799999999
Q ss_pred HHH-HHHHHHHhhcC
Q 042007 818 LTK-TLKELCLEFSL 831 (844)
Q Consensus 818 m~~-~vr~~~~~~~~ 831 (844)
|++ ++++.+.+.+.
T Consensus 253 m~~~~v~~~L~~~G~ 267 (275)
T 1umk_A 253 MIQYACLPNLDHVGH 267 (275)
T ss_dssp HHHHTTHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999 99998887654
No 21
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.93 E-value=4.9e-25 Score=240.60 Aligned_cols=223 Identities=15% Similarity=0.240 Sum_probs=163.6
Q ss_pred cccEEEEEEEEecC-----CEEEEEEeCCCCCccCCCcEEEEEcCCC----CCCCccCcccccCCC-----CCceEEEEE
Q 042007 529 NHKVEVIKAVIYTG-----NVLALYMTKPPGFKYQSGMYLFVKCPDL----SPFEWHPFSITSAPG-----DYYLSVHIR 594 (844)
Q Consensus 529 ~~~~~i~~v~~~~~-----~v~~l~i~~p~~~~~~pGQyv~l~~p~~----s~~e~HPFTI~s~p~-----~~~l~l~Ir 594 (844)
...++|++++.+++ ++.+|++..|..+.|+||||+.|.+|.. .++++|||||+|+|. .+.++|+||
T Consensus 37 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk 116 (314)
T 1fnb_A 37 PYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVK 116 (314)
T ss_dssp CEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEE
T ss_pred CEEEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEE
Confidence 35678999999886 8999999988778999999999999875 236899999999985 478999999
Q ss_pred ec-----------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCC-CCC
Q 042007 595 TL-----------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQ-DYK 662 (844)
Q Consensus 595 ~~-----------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~~ 662 (844)
.. |.+|+.|.++ ++| .+|.|.||||.+.. +..
T Consensus 117 ~~~y~~~~g~~~~G~~S~~L~~l-----------~~G-------------------------d~v~v~gP~G~~~~~~~~ 160 (314)
T 1fnb_A 117 RLIYTNDAGETIKGVCSNFLCDL-----------KPG-------------------------AEVKLTGPVGKEMLMPKD 160 (314)
T ss_dssp CCEEECTTSCEEECHHHHHHHHC-----------CTT-------------------------CEEEEEEEECSTTCCBSC
T ss_pred EEEeccCCCCcCCCchhhHhhcC-----------CCC-------------------------CEEEEEeccCCceeCCCC
Confidence 73 7789999873 356 67999999998753 223
Q ss_pred CCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeE
Q 042007 663 NYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVI 742 (844)
Q Consensus 663 ~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l 742 (844)
..+++||||||+||||++|++++++....... ....+++|+|++|+.+++ +|.++|+++++.. ...+
T Consensus 161 ~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~-----------~~~~~v~L~~g~R~~~d~-~~~~el~~l~~~~-~~~~ 227 (314)
T 1fnb_A 161 PNATIIMLGTGTGIAPFRSFLWKMFFEKHDDY-----------KFNGLAWLFLGVPTSSSL-LYKEEFEKMKEKA-PDNF 227 (314)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTB-----------CCCSEEEEEEEESSGGGC-CSHHHHHHHHHHC-TTTE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHHhccccc-----------cCCCCEEEEEecCCHHHh-hhHHHHHHHHHhC-CCcE
Confidence 46899999999999999999999875421100 014689999999999887 7888898887543 2257
Q ss_pred EEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH----HHhhCCCCcEEEEEeCChhH
Q 042007 743 EMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ----LATDHESSRIGVFYCGSATL 818 (844)
Q Consensus 743 ~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~----~~~~~~~~~v~V~~CGP~~m 818 (844)
+++..+|+..+... | ++..+.+.+.+ +..........||+|||++|
T Consensus 228 ~~~~~~s~~~~~~~-----------------------g-------~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~~m 277 (314)
T 1fnb_A 228 RLDFAVSREQTNEK-----------------------G-------EKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGM 277 (314)
T ss_dssp EEEEEETTTCBCTT-----------------------C-------CBCCHHHHHHTTHHHHHHHTTSTTEEEEEEECTTH
T ss_pred EEEEEECCCCcccC-----------------------C-------CceechHHHHHhHHHHHHHHhcCCeEEEEECCHHH
Confidence 77777765321100 0 12223333322 11112113568999999999
Q ss_pred HHHHHHHHHhhc
Q 042007 819 TKTLKELCLEFS 830 (844)
Q Consensus 819 ~~~vr~~~~~~~ 830 (844)
++++++++.+..
T Consensus 278 ~~~v~~~L~~~~ 289 (314)
T 1fnb_A 278 EKGIDDIMVSLA 289 (314)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999887754
No 22
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.93 E-value=7.4e-25 Score=233.80 Aligned_cols=224 Identities=15% Similarity=0.173 Sum_probs=163.6
Q ss_pred cccEEEEEEEEecCCEEEEEEeCCC---CCccCCCcEEEEEcCCCCCCCccCcccccCCC-CCceEEEEEec--------
Q 042007 529 NHKVEVIKAVIYTGNVLALYMTKPP---GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPG-DYYLSVHIRTL-------- 596 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~v~~l~i~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~-~~~l~l~Ir~~-------- 596 (844)
+..++|++++.+++++.++++..|. .+.|+||||++|.+|..+..++|||||+|+|. ++.++|+||..
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~l~vk~~~~~~~~~~ 91 (270)
T 2cnd_A 12 RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKF 91 (270)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCCSSCBTTB
T ss_pred eEEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCCcEEEEeeccCCCccCCCEEEEEEEEeccCccccc
Confidence 4678899999999999999998765 46799999999998765567899999999986 48899999974
Q ss_pred ---CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCC--------CCC--CC
Q 042007 597 ---GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPA--------QDY--KN 663 (844)
Q Consensus 597 ---G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~--------~~~--~~ 663 (844)
|.+|+.|.++ ++| .++.|.||||.+. .+- ..
T Consensus 92 ~~~G~~s~~l~~l-----------~~G-------------------------d~v~v~gP~G~~~~~~~g~f~l~~~~~~ 135 (270)
T 2cnd_A 92 PNGGLMTQYLDSL-----------PVG-------------------------SYIDVKGPLGHVEYTGRGSFVINGKQRN 135 (270)
T ss_dssp TTCCHHHHHHHHC-----------CTT-------------------------CEEEEEEEECSEECCSSSCEEETTEEEC
T ss_pred CCCCchhhHHhcC-----------CCC-------------------------CEEEEECCcccceeccccceeccCCccc
Confidence 7799988543 356 6899999999731 111 24
Q ss_pred CCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEE
Q 042007 664 YDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIE 743 (844)
Q Consensus 664 ~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~ 743 (844)
++++||||||+||||++++++++..... ....+++|+|++|+.+++ +|.++|+++++... +.++
T Consensus 136 ~~~~vliagGtGiaP~~~~l~~l~~~~~--------------~~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~~-~~~~ 199 (270)
T 2cnd_A 136 ARRLAMICGGSGITPMYQIIQAVLRDQP--------------EDHTEMHLVYANRTEDDI-LLRDELDRWAAEYP-DRLK 199 (270)
T ss_dssp CSEEEEEEEGGGHHHHHHHHHHHHHTTT--------------TCCCEEEEEEEESCGGGC-TTHHHHHHHHHHCT-TTEE
T ss_pred CCEEEEEeccccHHHHHHHHHHHHhcCC--------------CCCcEEEEEEEcCCHHHc-chHHHHHHHHHHCc-CcEE
Confidence 6899999999999999999999976421 135789999999999987 78888988875432 3566
Q ss_pred EEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHH-H
Q 042007 744 MHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKT-L 822 (844)
Q Consensus 744 i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~-v 822 (844)
++..+++....++. ..-+.||.+- .++++..... ..+..||+|||++|+++ +
T Consensus 200 ~~~~~s~~~~~~~~-------------------------~~~~~g~v~~-~~l~~~l~~~-~~~~~vyvCGp~~m~~~~~ 252 (270)
T 2cnd_A 200 VWYVIDQVKRPEEG-------------------------WKYSVGFVTE-AVLREHVPEG-GDDTLALACGPPPMIQFAI 252 (270)
T ss_dssp EEEEESCCSCGGGC-------------------------CCSEESSCCH-HHHHHHSCCC-SSSEEEEEECCHHHHHTTT
T ss_pred EEEEECCCCCCCCC-------------------------cccccccCCH-HHHHHhcCCC-cCCEEEEEECCHHHHHHHH
Confidence 66555442111000 0012367663 3344433221 23568999999999997 5
Q ss_pred HHHHHhhcC
Q 042007 823 KELCLEFSL 831 (844)
Q Consensus 823 r~~~~~~~~ 831 (844)
++.+.+.+-
T Consensus 253 ~~~L~~~G~ 261 (270)
T 2cnd_A 253 SPNLEKMKY 261 (270)
T ss_dssp HHHHHTTTC
T ss_pred HHHHHHcCC
Confidence 888776543
No 23
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.92 E-value=1.6e-24 Score=243.94 Aligned_cols=223 Identities=14% Similarity=0.222 Sum_probs=163.2
Q ss_pred ccEEEEEEEEecC-----CEEEEEEeCCC-CCccCCCcEEEEEcCCCC----CCCccCcccccCCC-----CCceEEEEE
Q 042007 530 HKVEVIKAVIYTG-----NVLALYMTKPP-GFKYQSGMYLFVKCPDLS----PFEWHPFSITSAPG-----DYYLSVHIR 594 (844)
Q Consensus 530 ~~~~i~~v~~~~~-----~v~~l~i~~p~-~~~~~pGQyv~l~~p~~s----~~e~HPFTI~s~p~-----~~~l~l~Ir 594 (844)
..++|++++.+++ ++.+|+|..|. .+.|+||||+.|.+|... ++++|||||+|+|. ++.++|+||
T Consensus 123 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk 202 (402)
T 2b5o_A 123 FLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVR 202 (402)
T ss_dssp EEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEE
T ss_pred EEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEE
Confidence 5678889999987 99999999875 488999999999998742 46899999999986 478999999
Q ss_pred e------------cCCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCC-CC
Q 042007 595 T------------LGDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQ-DY 661 (844)
Q Consensus 595 ~------------~G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~ 661 (844)
. .|.+|+.|.++ .+|+ .+|.|.||||.+.. +.
T Consensus 203 ~~~y~~~~~~~~~~G~~S~~L~~l-----------~~G~------------------------d~v~v~gP~G~~~~l~~ 247 (402)
T 2b5o_A 203 QLEYQDPESGETVYGVCSTYLCNL-----------PVGT------------------------DDVKITGPVGKEMLLPD 247 (402)
T ss_dssp CCEEECTTTCCEEECHHHHHHHTC-----------CTTC------------------------CCEEEEEEECSTTCCCS
T ss_pred EeeecccccCcCCCCchhHHHhhC-----------CCCC------------------------ceEEEEcccCCcccCCc
Confidence 8 47789888763 3441 36899999998743 22
Q ss_pred CCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCe
Q 042007 662 KNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNV 741 (844)
Q Consensus 662 ~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~ 741 (844)
...+++||||||+||||++|+|++++....... ....+++|+|++|+.+++ +|.++|+++++.. .+.
T Consensus 248 ~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~-----------~~~~~v~L~~g~R~~~d~-~~~~eL~~l~~~~-~~~ 314 (402)
T 2b5o_A 248 DEDATVVMLATGTGIAPFRAFLWRMFKEQHEDY-----------KFKGKAWLIFGVPYTANI-LYKDDFEKMAAEN-PDN 314 (402)
T ss_dssp CTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSC-----------CCCSEEEEEEEESSGGGC-TTHHHHHHHHHHC-TTT
T ss_pred cCCCCEEEEEcccCHHHHHHHHHHHHHhccccc-----------cccCCEEEEEecCCHHHh-HHHHHHHHHHHhC-CCc
Confidence 346899999999999999999999875421000 024789999999999887 8899999887643 235
Q ss_pred EEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHH----hhCCCCcEEEEEeCChh
Q 042007 742 IEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLA----TDHESSRIGVFYCGSAT 817 (844)
Q Consensus 742 l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~----~~~~~~~v~V~~CGP~~ 817 (844)
++++..+++..+... | +|..+.+.+.+.. +..+.....||+|||++
T Consensus 315 ~~v~~~~S~~~~~~~-----------------------g-------~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~~ 364 (402)
T 2b5o_A 315 FRLTYAISREQKTAD-----------------------G-------GKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKG 364 (402)
T ss_dssp EEEEEEETTTCBCTT-----------------------S-------CBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECGG
T ss_pred EEEEEEECCCCcccC-----------------------C-------CccchHHHHHHhHHHHHHHhccCCcEEEEECCHH
Confidence 778777775421100 0 2233333333211 11112356899999999
Q ss_pred HHHHHHHHHHhhc
Q 042007 818 LTKTLKELCLEFS 830 (844)
Q Consensus 818 m~~~vr~~~~~~~ 830 (844)
|++++++++.+..
T Consensus 365 M~~~v~~~L~~~g 377 (402)
T 2b5o_A 365 MQPPIDETFTAEA 377 (402)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888754
No 24
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.92 E-value=1.5e-24 Score=230.41 Aligned_cols=210 Identities=15% Similarity=0.182 Sum_probs=155.6
Q ss_pred cEEEEEEEEecCCEEEEEEeCCC-CCccCCCcEEEEEcCCCCCCCccCcccccCCC-CCceEEEEEe--cCCchHHHHHH
Q 042007 531 KVEVIKAVIYTGNVLALYMTKPP-GFKYQSGMYLFVKCPDLSPFEWHPFSITSAPG-DYYLSVHIRT--LGDWTTELKQR 606 (844)
Q Consensus 531 ~~~i~~v~~~~~~v~~l~i~~p~-~~~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~-~~~l~l~Ir~--~G~~T~~L~~~ 606 (844)
.++|++++.+++++.++++..|. ...|+||||+.|.+|..+..++|||||+|+|. ++.++|+||. .|.+|+.|.++
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~~~~l~~~vk~~~~G~~S~~l~~l 86 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSKL 86 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEETTTTEEEEEEECCCTTSHHHHHHTC
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEEEcCCCCceeeEEEEeeeecCCCCEEEEEEEEecCCchHHHHhcC
Confidence 57899999999999999999876 45799999999999976668999999999985 6889999999 89999988643
Q ss_pred HHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCC-CCCCCC-CCCeEEEEEcccchhchHHHHH
Q 042007 607 FEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGA-PAQDYK-NYDILLLIGLGIGATPFISIIK 684 (844)
Q Consensus 607 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~-~~~~~~-~~~~vvlVagGiGITp~lsil~ 684 (844)
++| .++.|.||||. +..+.. ..+++||||||+||||++|+++
T Consensus 87 -----------~~G-------------------------d~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~ 130 (262)
T 1ep3_B 87 -----------ESG-------------------------AKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAK 130 (262)
T ss_dssp -----------CTT-------------------------CEEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHH
T ss_pred -----------CCC-------------------------CEEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHH
Confidence 356 67999999998 543222 3789999999999999999999
Q ss_pred HHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHH
Q 042007 685 DLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAM 764 (844)
Q Consensus 685 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~ 764 (844)
++..+ .++++|+|++|+.+++ +|.++|++++.. +++ ++.... ..
T Consensus 131 ~l~~~------------------~~~v~l~~~~r~~~~~-~~~~el~~l~~~------~~~--~~~~~~--~~------- 174 (262)
T 1ep3_B 131 QLEKT------------------GCQMTILLGFASENVK-ILENEFSNLKNV------TLK--IATDDG--SY------- 174 (262)
T ss_dssp HHHHH------------------TCEEEEEEEESSGGGC-CCHHHHHTSTTE------EEE--EEETTC--SS-------
T ss_pred HHHHc------------------CCeEEEEEEcCCHHHh-hhHHHHhhhccC------cEE--EEECCC--CC-------
Confidence 99764 1579999999999987 677777655321 232 222110 00
Q ss_pred HHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEecC
Q 042007 765 VQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHKEN 843 (844)
Q Consensus 765 ~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~E~ 843 (844)
+ ..|| +.+++++.. +. ...||+|||++|++++++ +.+.+- ...++-|.
T Consensus 175 ---------------~-----~~g~--v~~~l~~~~---~~-~~~vyvCGp~~m~~~v~~-l~~~gv----~~~vs~e~ 222 (262)
T 1ep3_B 175 ---------------G-----TKGH--VGMLMNEID---FE-VDALYTCGAPAMLKAVAK-KYDQLE----RLYISMES 222 (262)
T ss_dssp ---------------S-----EESC--HHHHHHHCC---SC-CSEEEEESCHHHHHHHHH-HTTTCS----SEEEECCC
T ss_pred ---------------c-----ceee--hHHHHHhhc---cC-CCEEEEECCHHHHHHHHH-HHhCCC----CEEEEecc
Confidence 0 0122 333443321 22 347999999999999999 866432 24555554
No 25
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.91 E-value=6.3e-24 Score=231.77 Aligned_cols=221 Identities=16% Similarity=0.194 Sum_probs=160.1
Q ss_pred cccEEEEEEEEecCC--------------EEEEEEeCCCC-CccCCCcEEEEEcCCCC----C-------CCccCccccc
Q 042007 529 NHKVEVIKAVIYTGN--------------VLALYMTKPPG-FKYQSGMYLFVKCPDLS----P-------FEWHPFSITS 582 (844)
Q Consensus 529 ~~~~~i~~v~~~~~~--------------v~~l~i~~p~~-~~~~pGQyv~l~~p~~s----~-------~e~HPFTI~s 582 (844)
...++|++++.++++ +.+|++..|.. +.|+||||++|.+|... + +++|||||+|
T Consensus 21 ~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s 100 (314)
T 2rc5_A 21 PYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIAS 100 (314)
T ss_dssp CEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCS
T ss_pred CEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccccCccchhhcCCCceeeeccC
Confidence 356789999999887 99999998764 88999999999998752 2 5889999999
Q ss_pred CCC-----CCceEEEEEec------------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCc
Q 042007 583 APG-----DYYLSVHIRTL------------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASF 645 (844)
Q Consensus 583 ~p~-----~~~l~l~Ir~~------------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (844)
+|. ++.++|+||.. |.+|+.|.++ ++|
T Consensus 101 ~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l-----------~~G------------------------- 144 (314)
T 2rc5_A 101 PSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDL-----------KPG------------------------- 144 (314)
T ss_dssp CTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTC-----------CTT-------------------------
T ss_pred CccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcC-----------CCc-------------------------
Confidence 985 57899999984 5589888763 356
Q ss_pred CEEEEeCccCCCCCCC--CCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChh
Q 042007 646 PKILIKGPYGAPAQDY--KNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSF 723 (844)
Q Consensus 646 ~~v~IdGPyG~~~~~~--~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~ 723 (844)
.+|.|.||||.+.... ..++++||||||+||||++|+++++...... ....+++|+|++|+.+++
T Consensus 145 d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~~~-------------~~~~~v~l~~g~r~~~d~ 211 (314)
T 2rc5_A 145 DEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLI-------------KFTGNITLVYGAPYSDEL 211 (314)
T ss_dssp CEEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTCSS-------------CBCSCEEEEEEESSGGGS
T ss_pred CEEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhccc-------------CCCCcEEEEEEeCCHHHH
Confidence 6799999999875322 3478999999999999999999998754210 023679999999999986
Q ss_pred hhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHH----H
Q 042007 724 EWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQ----L 799 (844)
Q Consensus 724 ~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~----~ 799 (844)
+|.++|+++++.. ..++++..+|+..... . .| +|..+.+.+.+ +
T Consensus 212 -~~~~el~~l~~~~--~~~~~~~~~s~~~~~~-~---------------------~g-------~~~~v~~~l~~~~~~l 259 (314)
T 2rc5_A 212 -VMMDYLKGLESKH--KNFKLITAISREEKNS-F---------------------DG-------GRMYISHRVREQAEAV 259 (314)
T ss_dssp -CSHHHHHHHHHHH--SSEEEEEEETTTCBCT-T---------------------TS-------SBCCHHHHHHHTHHHH
T ss_pred -hHHHHHHHHHHhC--CcEEEEEEECCCCCcc-c---------------------CC-------CceehhHHHHHhHHHH
Confidence 8888998886532 2577877777642110 0 00 12222332222 1
Q ss_pred HhhCCCCcEEEEEe-CChhHHHHHHHHHHhhcC
Q 042007 800 ATDHESSRIGVFYC-GSATLTKTLKELCLEFSL 831 (844)
Q Consensus 800 ~~~~~~~~v~V~~C-GP~~m~~~vr~~~~~~~~ 831 (844)
.+..+... .+|+| ||++|++++++++.+...
T Consensus 260 ~~~~~~~~-~~yvCGGp~~m~~~v~~~L~~~g~ 291 (314)
T 2rc5_A 260 KKILNGGG-RFYICGGPKGMEKGVIEEIQKISG 291 (314)
T ss_dssp HHHHHHTC-EEEEEESSTTTHHHHHHHHHHHHT
T ss_pred HHHhhcCC-eEEEeCCcHHHHHHHHHHHHHHHh
Confidence 11010012 35999 999999999999988643
No 26
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.84 E-value=6.3e-21 Score=190.62 Aligned_cols=166 Identities=47% Similarity=0.790 Sum_probs=134.6
Q ss_pred hhhhhhhhhhhhhhccCCCchHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHH
Q 042007 79 SAARGLQSLRFLDRTVTGKENDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKE 158 (844)
Q Consensus 79 ~a~~~l~~l~~i~~~~~~~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~ 158 (844)
++..++++|++|++ .+ ..+++.+++++|+.+|+||+|+.+||..++|......++.++|+.++..++ +++|.|+|+
T Consensus 7 ~~~~~~~~l~~~~~--~~-~~~~~~~~~~~F~~~D~dG~I~~~el~~~lg~~~~~~~~~~i~~~~d~~~~-~~~~~i~~~ 82 (179)
T 3a8r_A 7 SAAVALKGLQFVTA--KV-GNDGWAAVEKRFNQLQVDGVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRG-IVKQVLTKD 82 (179)
T ss_dssp HHHHHHHHHHHHHH--HH-CCCCHHHHHHHHHHHCBTTBEEGGGHHHHHTCCSCHHHHHHHHHHHHHHHT-CCSSEECHH
T ss_pred chhhhHHHHHHHHh--cc-chhhHHHHHHHHhccCCCCCCcHHHHHHHHCCCCcHHHHHHHHHHHHHhcc-CCCCCcCHH
Confidence 34567889999988 32 225688899999999999999999999999998888889999998876543 567889999
Q ss_pred HHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH-hhhccccccccccchHHHHHHHHHHhCCCCCCceeH
Q 042007 159 EVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV-LSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEM 237 (844)
Q Consensus 159 EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~-~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~ 237 (844)
||..++..+.....+++++.+|++||+|+||+|+.+||+.++. .... +.+...++..++.++.+|+++|.|+||.|+|
T Consensus 83 ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~ 161 (179)
T 3a8r_A 83 ELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA-NKLSKIKERADEYTALIMEELDPTNLGYIEM 161 (179)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHSTTCCSEECH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhcc-ccccccccchHHHHHHHHHHhCCCCCCcCcH
Confidence 9999998887777889999999999999999999999999997 3321 1121112335778999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 042007 238 WQLEILLRGMVN 249 (844)
Q Consensus 238 ~EF~~ll~~~~~ 249 (844)
+||..+|...|.
T Consensus 162 ~EF~~~~~~~p~ 173 (179)
T 3a8r_A 162 EDLEALLLQSPS 173 (179)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHhCcc
Confidence 999999988774
No 27
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.82 E-value=2.4e-19 Score=189.15 Aligned_cols=199 Identities=15% Similarity=0.133 Sum_probs=140.8
Q ss_pred ccccEEEEEEEEecCCEEEEEEeCCC--CC-ccCCCcEEEEEcCCC-CCCCccCcccccCCCCCceEEEEEec---CCch
Q 042007 528 LNHKVEVIKAVIYTGNVLALYMTKPP--GF-KYQSGMYLFVKCPDL-SPFEWHPFSITSAPGDYYLSVHIRTL---GDWT 600 (844)
Q Consensus 528 ~~~~~~i~~v~~~~~~v~~l~i~~p~--~~-~~~pGQyv~l~~p~~-s~~e~HPFTI~s~p~~~~l~l~Ir~~---G~~T 600 (844)
.+..++|++++.++.++.++++..|. .+ .++|||||.|.+|.. ....++||||++.|. +.+++.++.. |..|
T Consensus 7 ~~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~-~~~~i~~~~~~~~G~~S 85 (252)
T 2gpj_A 7 APRELEVIRSTYITPHMLRITLGGAGLAGFPADQESAYIKLLFPQAGERPLMRTYTIRQQRD-DEIDVDFVLHDTDGPAS 85 (252)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEESGGGTTCCSCCTTCEEEEEECCTTSCCEEEEEECCEEET-TEEEEEEECCSSCCHHH
T ss_pred CcEEEEEEEEEEcCCCEEEEEEEcCChhhcCCCCCCCeEEEEcccCCCCCCCCceeeeccCC-CEEEEEEEEeCCCCcHH
Confidence 45678899999999999999999775 33 479999999999863 446889999999876 6777777765 6688
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchH
Q 042007 601 TELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFI 680 (844)
Q Consensus 601 ~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~l 680 (844)
+.|.++ ++| ..+.|.||+|.+..+ ...+.+|||||||||||++
T Consensus 86 ~~l~~l-----------~~G-------------------------d~l~v~gP~G~f~l~-~~~~~~lliagGtGitPi~ 128 (252)
T 2gpj_A 86 SWAKTA-----------QVG-------------------------ELIQIGGPGLKKLIN-FEADWFLLAGDMTALPAIS 128 (252)
T ss_dssp HHHHHC-----------CTT-------------------------CEEEEEEEECCCCCC-SSSSEEEEEEEGGGHHHHH
T ss_pred HHHhhC-----------CCC-------------------------CEEEEecCCCCCcCC-CCCceEEEEcchhhHHHHH
Confidence 877542 467 689999999987643 2347899999999999999
Q ss_pred HHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHH
Q 042007 681 SIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSA 760 (844)
Q Consensus 681 sil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~ 760 (844)
+|++++.. ..++++++.+|+.+++.. +. ....++++........ .
T Consensus 129 s~l~~l~~-------------------~~~~~~~~~~~~~~d~~~-------l~---~~~~~~v~~~~~~~~~--~---- 173 (252)
T 2gpj_A 129 VNLAKLPN-------------------NAVGYAVIEVLSEADIQP-------LV---HPEHVELHWVINPEAD--P---- 173 (252)
T ss_dssp HHHHHSCT-------------------TCEEEEEEEESSGGGCCC-------CC---CCTEEEEEEEECSSCC--T----
T ss_pred HHHHhCCC-------------------CCcEEEEEEECCHHHhhc-------cc---CCCCcEEEEEeCCCCC--c----
Confidence 99998721 246778888898877532 11 1235666543322110 0
Q ss_pred HHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhC--CCCcEEEEEeCChhHHHHHHHHHH-hhc
Q 042007 761 LIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDH--ESSRIGVFYCGSATLTKTLKELCL-EFS 830 (844)
Q Consensus 761 ~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~--~~~~v~V~~CGP~~m~~~vr~~~~-~~~ 830 (844)
.|+ .+.+..... +.....||+|||++|++++++.+. +.+
T Consensus 174 --------------------------~g~-----~~~~~l~~~~~~~~~~~vy~CGP~~m~~av~~~l~~~~G 215 (252)
T 2gpj_A 174 --------------------------EGR-----PLVERIAQLPWLAGEPAVWIACEFNSMRALRRHFKQAHA 215 (252)
T ss_dssp --------------------------TCH-----HHHHHHTTSCCCSSCEEEEEEEEHHHHHHHHHHHHHHCC
T ss_pred --------------------------ccH-----HHHHHHHhccCCCCCcEEEEEcCHHHHHHHHHHHHHhcC
Confidence 011 011111111 123568999999999999999987 554
No 28
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.76 E-value=5e-18 Score=163.67 Aligned_cols=136 Identities=16% Similarity=0.280 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~ 172 (844)
.++++++++.|+.+| ++|.|+.+||..++ |.......+..++..++ .+++|.|+++||+..+.... ....
T Consensus 6 ~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~i~~~ef~~~~~~~~~~~~~ 81 (148)
T 2lmt_A 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAE----NNNNGQLNFTEFCGIMAKQMRETDT 81 (148)
T ss_dssp SHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHH----TTSTTEEEHHHHHHHHHHTTTTTTT
T ss_pred HHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcc----cCCCCcccHHHHHHHHHHHhcccCc
Confidence 467888888888887 89999999999887 66666777778887666 57899999999999887654 4566
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+++++.+|+.||+|++|+|+.+||+.++...+. . ..++.++.+|+++|.|+||.|+|+||.++|.+
T Consensus 82 ~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~--~------~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 82 EEEMREAFKIFDRDGDGFISPAELRFVMINLGE--K------VTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTC--C------CCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCc--c------ccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 889999999999999999999999999975432 2 23567889999999999999999999999964
No 29
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.75 E-value=9.2e-18 Score=160.64 Aligned_cols=134 Identities=11% Similarity=0.197 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLD 173 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~ 173 (844)
++..++++.|+.+| ++|.|+.+||..++ |...+...+.+++..++ .|++|.|+|+||+.++.... .....
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~~~ 78 (143)
T 2obh_A 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEID----KEGTGKMNFGDFLTVMTQKMSEKDTK 78 (143)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHT----TTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCeeeHHHHHHHHHHHhccccHH
Confidence 46777888888888 89999999999887 66667777888888665 57799999999999886532 33456
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+.++.+|+.||+|++|+|+.+||++++..... . ..++.++.+|+++|.|+||.|+|+||..+|.
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~------~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGE--N------LTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC--C------CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 78999999999999999999999999965321 2 2356788999999999999999999999885
No 30
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.73 E-value=4.7e-18 Score=169.25 Aligned_cols=138 Identities=19% Similarity=0.314 Sum_probs=113.3
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CC
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KD 171 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~ 171 (844)
+.++++++++.|+.+| +||.|+.+||..++ |...+...+.+++..++ .|++|.|+|+||+..+..... ..
T Consensus 6 t~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d----~d~~~~i~~~ef~~~~~~~~~~~~ 81 (176)
T 2lhi_A 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID----VDGNHQIEFSEFLALMSRQLKSND 81 (176)
T ss_dssp CTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTC----SSCSSSBCTTHHHHHHTSSCCSSH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhC----cCCCccchHHHHHHHHHHhcccCC
Confidence 3467888888888888 89999999999887 77777666666666444 588999999999998865543 34
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.+++++.+|+.||+|++|+|+.+||++++..... ...++.++.||+++| |+||.|+|+||..+|.+..
T Consensus 82 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~--------~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~~ 149 (176)
T 2lhi_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE--------KLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149 (176)
T ss_dssp HHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTC--------CCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCCS
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCc--------ccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhcC
Confidence 6788999999999999999999999999965321 223667889999999 9999999999999997654
No 31
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.73 E-value=2.6e-17 Score=163.88 Aligned_cols=146 Identities=13% Similarity=0.215 Sum_probs=120.2
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhcc---CCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICV---GMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~l---g~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...+++.++++.|+.+|++|.|+.+||..++ +.. .....+.++|+.++ .|+||.|+++||..++..+.....
T Consensus 15 ~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~g~i~~~Ef~~~~~~~~~~~~ 90 (183)
T 1s6c_A 15 FTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD----TTQTGSVKFEDFVTALSILLRGTV 90 (183)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHC----TTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhC----CCCCCcEeHHHHHHHHHHHcCCCH
Confidence 3457899999999987899999999999887 332 46677888999666 577999999999999998877788
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--cc----cccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--EN----KLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~----~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+++++.+|+.||.|+||+|+.+||+.++..... +. .++ ++..++.++.+|+.+|.|+||+|+++||..+|..
T Consensus 91 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 168 (183)
T 1s6c_A 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK--EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168 (183)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCcc--HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 899999999999999999999999999975421 11 122 3445688999999999999999999999999987
Q ss_pred CC
Q 042007 247 MV 248 (844)
Q Consensus 247 ~~ 248 (844)
.|
T Consensus 169 ~~ 170 (183)
T 1s6c_A 169 DD 170 (183)
T ss_dssp CC
T ss_pred Ch
Confidence 65
No 32
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.73 E-value=5.8e-18 Score=188.23 Aligned_cols=186 Identities=13% Similarity=0.245 Sum_probs=131.1
Q ss_pred ccCCCcEEEEEcCCCCCCCccCcccccCCC--CCceEEEEEec----------CCchHHHHHHHHhhcCCCCCCCCCCCc
Q 042007 556 KYQSGMYLFVKCPDLSPFEWHPFSITSAPG--DYYLSVHIRTL----------GDWTTELKQRFEKVCEAPAPAKPNRGN 623 (844)
Q Consensus 556 ~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~--~~~l~l~Ir~~----------G~~T~~L~~~~~~~~~~~~~~~~g~~~ 623 (844)
++.||||+.+..| .++|||||+|+|. ++.++|+||.. |..|..|.+.+ ++|
T Consensus 145 ~~~~Gq~v~l~~~----~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~~l----------~~G--- 207 (374)
T 1ddg_A 145 QLDAEALINLLRP----LTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRV----------EEE--- 207 (374)
T ss_dssp CCCHHHHHHHSCB----CCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHHSC----------CSS---
T ss_pred CCCHHHHHhhccC----CCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHhcC----------CCC---
Confidence 7899999999775 4899999999996 57899999986 77899888732 355
Q ss_pred chhhhhhhhhccccccccccCcCEEEEeC-ccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcC
Q 042007 624 LMRMETKSAANNANFEQIQASFPKILIKG-PYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLEN 702 (844)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~v~IdG-PyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~ 702 (844)
.+|.|.| |.|.+..+......+||||||+||||++|+++++....
T Consensus 208 ----------------------d~v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~------------ 253 (374)
T 1ddg_A 208 ----------------------GEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE------------ 253 (374)
T ss_dssp ----------------------CEEEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT------------
T ss_pred ----------------------CEEEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC------------
Confidence 5799998 55576544345678999999999999999999987652
Q ss_pred CCCCCCcEEEEEEEeCCC-ChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccC
Q 042007 703 GFKKGPERAYFYWVTREQ-GSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSES 781 (844)
Q Consensus 703 ~~~~~~~~v~l~W~~R~~-~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~ 781 (844)
...++.|+|++|+. +++ +|.++|+++++.. ...+++..+++...... .+.+
T Consensus 254 ----~~~~~~L~~G~R~~~~d~-ly~~El~~~~~~~--~~~~l~~a~Srd~~~k~--------------------yVq~- 305 (374)
T 1ddg_A 254 ----APGKNWLFFGNPHFTEDF-LYQVEWQRYVKEG--VLTRIDLAWSRDQKEKV--------------------YVQD- 305 (374)
T ss_dssp ----CCSCEEEEEEESCHHHHC-TTHHHHHHHHHTT--SCCEEEEEETTSSSSCC--------------------CHHH-
T ss_pred ----CCCCEEEEEEeCCchhhh-hHHHHHHHHHHhC--CCcEEEEEEecCCCCCc--------------------cHHH-
Confidence 24679999999998 565 7889998887542 23466666665321100 0000
Q ss_pred cccccccCCChHHHHHHHHhhCCCCcEEEEEeC-ChhHHHHHHHHHHhhc
Q 042007 782 RIKTHFARPNWRKVFGQLATDHESSRIGVFYCG-SATLTKTLKELCLEFS 830 (844)
Q Consensus 782 ~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CG-P~~m~~~vr~~~~~~~ 830 (844)
++ +.+.+++.+ .... ...||+|| |++|+++|++++.+..
T Consensus 306 ~l-----~~~~~~l~~-~l~~----~~~vYvCG~p~~M~~~V~~~L~~i~ 345 (374)
T 1ddg_A 306 KL-----REQGAELWR-WIND----GAHIYVCGDANRMAKDVEQALLEVI 345 (374)
T ss_dssp HH-----HHTHHHHHH-HHHT----TCEEEEEECTTTHHHHHHHHHHHHH
T ss_pred HH-----HHhHHHHHH-HHhC----CcEEEEECCCHHHHHHHHHHHHHHH
Confidence 00 001122221 2211 23799999 9999999999887743
No 33
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.73 E-value=1.4e-17 Score=182.62 Aligned_cols=137 Identities=15% Similarity=0.293 Sum_probs=114.1
Q ss_pred CchHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cC
Q 042007 97 KENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KK 170 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~ 170 (844)
...++++++++.|+.+| +||.|+.+||..+| |...+...++++|+.++ .|+||.|+|+||+.++.... ..
T Consensus 296 Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D----~DgDG~IdFeEFl~lms~~lk~~ 371 (440)
T 3u0k_A 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD----ADGDGTIDFPEFLIMMARKMKDT 371 (440)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC----SSCSSSEEHHHHHHHHHTC----
T ss_pred hhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHHhcCC
Confidence 34578999999999988 89999999999887 77777778888888666 67899999999999987543 34
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
..+++++.+|+.||+|+||+||.+||++++.... ..+ .+++++.+|+++|.|+||.|+|+||.++|.
T Consensus 372 d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lG--e~L------SdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EKL------TDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp --CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT--CCC------CHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred ChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC--CCC------CHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 5678999999999999999999999999996543 222 367788999999999999999999999985
No 34
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.72 E-value=6.4e-18 Score=171.26 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=107.1
Q ss_pred CchHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCC
Q 042007 97 KENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKD 171 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~ 171 (844)
...++..++.+.|..+| ++|.|+.+||..++ |...+...+.++|+.++ .|++|.|+|+||+.++.......
T Consensus 51 l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D----~d~~g~I~~~EF~~~~~~~~~~~ 126 (197)
T 3pm8_A 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDID----SNASGQIHYTDFLAATIDKQTYL 126 (197)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-----------CEEHHHHHHTTCCHHHHC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHHHhhh
Confidence 34567888888888887 89999999999887 55555667888888665 57799999999999886655556
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.++.++.+|+.||+|++|+||.+||++++...... ....++.++.+|+++|.|+||.|+|+||..+|.+
T Consensus 127 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~------~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIE------NPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHHCTTCSSEECHHHHHHHHC----C------CHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC------CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 78899999999999999999999999999543211 1224677899999999999999999999999975
No 35
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.72 E-value=7.8e-17 Score=166.77 Aligned_cols=148 Identities=13% Similarity=0.214 Sum_probs=122.4
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhccC---C-CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICVG---M-GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg---~-~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...++++++++.|+..|++|.|+.+||..++. . ......+.++|+.++ .|+||.|+++||..++..+.....
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D----~d~~G~I~~~Ef~~~l~~~~~~~~ 123 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD----TTQTGSVKFEDFVTALSILLRGTV 123 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHC----TTCSSCBCHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhc----CCCCCcEeHHHHHHHHHHHccCCH
Confidence 34578999999999866999999999999883 2 245677888999766 577999999999999998877788
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--ccc--ccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--ENK--LSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~~--l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||.|+||+|+.+||++++..... +.. ....++..++.++.+|+++|.|+||+|+++||..+|...|
T Consensus 124 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 203 (224)
T 1s1e_A 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDD 203 (224)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence 999999999999999999999999999975421 111 1111345678899999999999999999999999998765
No 36
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.71 E-value=3e-17 Score=170.43 Aligned_cols=146 Identities=15% Similarity=0.206 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhcc----CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICV----GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDA 174 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~l----g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~ 174 (844)
.++++++++.|...|++|.|+.+||..++ +.......+.++|+.++ .|+||.|+|+||+.++..+.....++
T Consensus 63 ~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D----~d~~G~I~~~Ef~~~l~~~~~~~~~~ 138 (229)
T 3dd4_A 63 KKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFD----TDHNGAVSFEDFIKGLSILLRGTVQE 138 (229)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTC----SSCCSSCCHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcC----CCCCCeEeHHHHHHHHHHHcCCChHH
Confidence 46789999999888899999999999987 33445567788888655 57799999999999999888888899
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccc----cccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASEN----KLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~----~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++.+|+.||+|+||+|+.+||.+++....... .....+...++.++.+|+++|.|+||.|+|+||..++.+.|
T Consensus 139 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~ 216 (229)
T 3dd4_A 139 KLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDE 216 (229)
T ss_dssp HHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCH
Confidence 999999999999999999999999997542100 00001223456789999999999999999999999998765
No 37
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.71 E-value=2.8e-17 Score=168.91 Aligned_cols=145 Identities=15% Similarity=0.233 Sum_probs=117.0
Q ss_pred CchHHHHHHHHHHHcccC--------C--CCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCc-eeHHHHHHHHH
Q 042007 97 KENDAWRSIERRFQQFAV--------S--GRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENG-ITKEEVRMFWE 165 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~--------d--G~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~-I~f~EF~~~l~ 165 (844)
....+++++++.|+.+|. + |.|+.+||.. +...+.....+++|+.++ .|+||. |+|+||+.++.
T Consensus 45 ~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~~lf~~~D----~d~dG~~I~f~EF~~~~~ 119 (214)
T 2l4h_A 45 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRVFS----TSPAKDSLSFEDFLDLLS 119 (214)
T ss_dssp CCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHHHHHHHHC----CSSSCCSEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHHHHHHHhC----cCCCCCEecHHHHHHHHH
Confidence 455789999999999875 6 9999999998 511111233567888665 577999 99999999998
Q ss_pred HhccC-ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcc---ccccccccchHHHHHHHHHHhCCCCCCceeHHHHH
Q 042007 166 DMTKK-DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASE---NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLE 241 (844)
Q Consensus 166 ~~~~~-~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~---~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~ 241 (844)
.+... ..+++++.+|++||+|+||+|+.+||++++...... ..++ ++++++.++.+|+++|.|+||.|+|+||.
T Consensus 120 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s--~~e~~~~~~~~~~~~D~d~dG~Is~~EF~ 197 (214)
T 2l4h_A 120 VFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS--ASEMKQLIDNILEESDIDRDGTINLSEFQ 197 (214)
T ss_dssp HTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCS--CTHHHHHHHHHHHHHCCSCCSSBCSHHHH
T ss_pred HHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCC--HHHHHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence 87654 457899999999999999999999999999765431 1233 45567778889999999999999999999
Q ss_pred HHHHcCC
Q 042007 242 ILLRGMV 248 (844)
Q Consensus 242 ~ll~~~~ 248 (844)
.++...|
T Consensus 198 ~~~~~~p 204 (214)
T 2l4h_A 198 HVISRSP 204 (214)
T ss_dssp HHHHTCH
T ss_pred HHHHhCh
Confidence 9998765
No 38
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.71 E-value=4.3e-17 Score=159.46 Aligned_cols=137 Identities=19% Similarity=0.263 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHccc----CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc--
Q 042007 99 NDAWRSIERRFQQFA----VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-- 169 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld----~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-- 169 (844)
.++++++++.|+.+| ++|+|+.+||+.+| |...+...+.+++ ..+ .+++|.|+|+||+.++.....
T Consensus 5 ~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~----~~d-~~~~g~i~f~eFl~~~~~~~~~~ 79 (159)
T 3i5g_C 5 KDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHG----GTK-KMGEKAYKLEEILPIYEEMSSKD 79 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTT----CCS-STTSCEECHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHH----ccc-ccCCCcccHHHHHHHHHHhhccc
Confidence 456777777776665 68999999999887 6666655444433 333 367999999999999976653
Q ss_pred -CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC--CCCCceeHHHHHHHHHc
Q 042007 170 -KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP--DCKGYIEMWQLEILLRG 246 (844)
Q Consensus 170 -~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~--d~dG~It~~EF~~ll~~ 246 (844)
...++.++.+|+.||+|++|+|+.+||++++...+ .++ .++.++.|++++|. |+||.|+|+||.++|..
T Consensus 80 ~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g--~~l------s~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 80 TGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG--ERI------TEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp TTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSS--SCC------CHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhC--CCC------CHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 35578899999999999999999999999997543 223 36778899999995 88999999999998887
Q ss_pred CC
Q 042007 247 MV 248 (844)
Q Consensus 247 ~~ 248 (844)
.|
T Consensus 152 ~p 153 (159)
T 3i5g_C 152 GP 153 (159)
T ss_dssp CS
T ss_pred CC
Confidence 65
No 39
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.71 E-value=1.1e-16 Score=153.76 Aligned_cols=136 Identities=16% Similarity=0.292 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~ 172 (844)
.+++.++++.|+.+| ++|.|+.+||..++ |...+...+..++..++ .|++|.|+|+||+.++.... ....
T Consensus 6 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~~ 81 (148)
T 1exr_A 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD----ADGNGTIDFPEFLSLMARKMKEQDS 81 (148)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC----TTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHC----CCCCCcCcHHHHHHHHHhcccCCCc
Confidence 356677777777777 89999999999887 66667777888888655 57799999999999886543 3455
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
++.++.+|+.||+|++|+|+.+||++++.... ..+ .++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~------~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLG--EKL------TDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT--CCC------CHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCC------CHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 67899999999999999999999999996532 122 3567889999999999999999999999863
No 40
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.70 E-value=1.5e-16 Score=152.71 Aligned_cols=137 Identities=15% Similarity=0.258 Sum_probs=113.0
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
..++.+++.+.|+.+| ++|.|+.+||..++ |...+...+..++..++ .|++|.|+|+||+.++........
T Consensus 6 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~ 81 (153)
T 3ox6_A 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQIN----MNLGGHVDFDDFVELMGPKLLAET 81 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHH----TTSTTCCCHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCccCcHHHHHHHHHHHhhccc
Confidence 4467788888888887 89999999999887 56667778888898776 577999999999999976543322
Q ss_pred -----HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 173 -----DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 173 -----~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
.+.++.+|+.||+|++|+|+.+||++++..... ..+ .++.++.+|+.+|.|+||.|+|+||..+|.
T Consensus 82 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 82 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG-HQV------GHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHS-SCC------CHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc-CCC------CHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 578999999999999999999999999975221 122 356788999999999999999999999875
No 41
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.70 E-value=6.1e-17 Score=163.17 Aligned_cols=139 Identities=12% Similarity=0.185 Sum_probs=112.7
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
..++++++++.|+.+| ++|.|+.+||..++ |...+ ..+.++|+.++ .|+||.|+|+||+.++.... ...
T Consensus 47 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D----~d~~g~i~~~EF~~~~~~~~-~~~ 120 (191)
T 3k21_A 47 NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQID----SDGSGKIDYTEFIAAALDRK-QLS 120 (191)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHC----TTCSSSEEHHHHHHHHSCGG-GCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhC----CCCCCeEeHHHHHHHHHhhh-hcc
Confidence 4567888888888888 79999999999988 66555 56788888665 57899999999999885443 366
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
++.++.+|+.||+|+||+||.+||++++........++ +...+.++.+|+++|.|+||.|+|+||..+|+
T Consensus 121 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~---~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 121 KKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT---QRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCC---HHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCC---HhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 78999999999999999999999999996532222232 11235689999999999999999999999985
No 42
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.70 E-value=9.9e-17 Score=163.18 Aligned_cols=147 Identities=14% Similarity=0.205 Sum_probs=119.0
Q ss_pred CchHHHHHHHHHHHccc----CCCCcCHHHHhhccC--CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-c
Q 042007 97 KENDAWRSIERRFQQFA----VSGRLPKDKFGICVG--MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-K 169 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld----~dG~is~~eF~~~lg--~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~ 169 (844)
...+++.++++.|+.+| ++|.|+.+||..++. .......+.++|+.++ .|+||.|+|+||+.++.... .
T Consensus 31 ~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D----~d~~g~i~~~Ef~~~~~~~~~~ 106 (207)
T 2ehb_A 31 FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFD----VKRNGVIEFGEFVRSLGVFHPS 106 (207)
T ss_dssp CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSCTTCCCHHHHHHHHHHC----TTCSSEECHHHHHHHHGGGSTT
T ss_pred CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhccccccHHHHHHHHHHhc----CCCCCeEeHHHHHHHHHHHccC
Confidence 34467788888888777 579999999999883 2334456788898666 57799999999999998776 3
Q ss_pred CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 170 KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 170 ~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...+++++.+|+.||.|+||+|+.+||++++..... +..++ ++++++.+..+|+++|.|+||.|+|+||..+|...
T Consensus 107 ~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~--~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 184 (207)
T 2ehb_A 107 APVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS--EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN 184 (207)
T ss_dssp SCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccC--HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 467889999999999999999999999999964321 22333 55667778889999999999999999999999988
Q ss_pred CC
Q 042007 248 VN 249 (844)
Q Consensus 248 ~~ 249 (844)
|.
T Consensus 185 ~~ 186 (207)
T 2ehb_A 185 PS 186 (207)
T ss_dssp GG
T ss_pred hH
Confidence 74
No 43
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.70 E-value=9.3e-17 Score=179.44 Aligned_cols=189 Identities=14% Similarity=0.284 Sum_probs=127.9
Q ss_pred cCCCcEEEEEcCCCCCCCccCcccccCCC--CCceEEEEEec------------CCchHHHHHHHHhhcCCCCCCCCCCC
Q 042007 557 YQSGMYLFVKCPDLSPFEWHPFSITSAPG--DYYLSVHIRTL------------GDWTTELKQRFEKVCEAPAPAKPNRG 622 (844)
Q Consensus 557 ~~pGQyv~l~~p~~s~~e~HPFTI~s~p~--~~~l~l~Ir~~------------G~~T~~L~~~~~~~~~~~~~~~~g~~ 622 (844)
..+||++.+ +|. .++|||||+|+|. .+.++++|++. |..|+.|.++ ++|.
T Consensus 157 ~p~~~~l~~-lp~---l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l-----------~~Gd- 220 (393)
T 4dql_A 157 MKFSEFIAL-LPS---IRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL-----------QEGD- 220 (393)
T ss_dssp CCHHHHHHT-SCB---CCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHC-----------CTTC-
T ss_pred CCHHHHHHh-CCC---CcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhC-----------CCcC-
Confidence 345665544 333 5899999999997 47899999987 6688888763 3552
Q ss_pred cchhhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcC
Q 042007 623 NLMRMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLEN 702 (844)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~ 702 (844)
...+.|.||+|.+..+......+||||||+||||++|++++.......+.
T Consensus 221 ----------------------~v~v~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~-------- 270 (393)
T 4dql_A 221 ----------------------TITCFISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQ-------- 270 (393)
T ss_dssp ----------------------EEEEEEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC--------
T ss_pred ----------------------EEEEEEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCC--------
Confidence 24566899999886554456789999999999999999998644322221
Q ss_pred CCCCCCcEEEEEEEeCCC-ChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccC
Q 042007 703 GFKKGPERAYFYWVTREQ-GSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSES 781 (844)
Q Consensus 703 ~~~~~~~~v~l~W~~R~~-~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~ 781 (844)
...++.|+|++|+. +++ +|.+++.++.+. +.++++..+++....... . +
T Consensus 271 ----~~~~v~L~~G~R~~~~d~-ly~~el~~~~~~---~~l~l~~a~Sr~~~~~k~--y-----------------V--- 320 (393)
T 4dql_A 271 ----SLGEAHLYFGCRSPHEDY-LYQEELENAQSE---GIITLHTAFSRMPNQPKT--Y-----------------V--- 320 (393)
T ss_dssp ----CCCCEEEEEEESCTTTCC-TTHHHHHHHHHT---TSCEEEEEESSCTTSCCC--C-----------------H---
T ss_pred ----CCCCEEEEEEECCcchhh-HHHHHHHHHHhC---CCeEEEEEEeCCCCCCCc--c-----------------h---
Confidence 24679999999995 565 889999988764 456777777663211100 0 0
Q ss_pred cccccccCCChHHHHHHHHhhCCCCcEEEEEeCC-hhHHHHHHHHHHhh
Q 042007 782 RIKTHFARPNWRKVFGQLATDHESSRIGVFYCGS-ATLTKTLKELCLEF 829 (844)
Q Consensus 782 ~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP-~~m~~~vr~~~~~~ 829 (844)
.+.-|.+.+++.+-+ .. ...||+||| +.|.++|++++.+.
T Consensus 321 ---q~~l~~~~~~l~~~l-~~----~~~vYvCGp~~~M~~~V~~~L~~i 361 (393)
T 4dql_A 321 ---QHVMEQDGKKLIELL-DQ----GAHFYICGDGSQMAPAVEATLMKS 361 (393)
T ss_dssp ---HHHHHHTHHHHHHHH-HT----TCEEEEEEETTTHHHHHHHHHHHH
T ss_pred ---hhHHHhCHHHHHHHH-hC----CcEEEEECCchhhHHHHHHHHHHH
Confidence 000122333333322 21 247999999 57888999888764
No 44
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.70 E-value=2e-16 Score=158.34 Aligned_cols=149 Identities=17% Similarity=0.246 Sum_probs=120.6
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhccC----CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICVG----MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg----~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...++++++++.|+..+++|.|+.+||..++. .......+.++|+.++ .|+||.|+++||..++..+.....
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~g~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1g8i_A 22 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFD----ENKDGRIEFSEFIQALSVTSRGTL 97 (190)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHC----TTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHh----cCCCCeEeHHHHHHHHHHhcCCCH
Confidence 34578888999998744899999999998872 1234567888888666 578999999999999988877788
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhh----ccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSA----SENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~----~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.+|.|+||+|+.+||+.++.... ........+...++.+..+|+.+|.|+||.|+++||..++...|
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~ 177 (190)
T 1g8i_A 98 DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADP 177 (190)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCH
T ss_pred HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCh
Confidence 99999999999999999999999999996531 11111112344678899999999999999999999999998776
Q ss_pred C
Q 042007 249 N 249 (844)
Q Consensus 249 ~ 249 (844)
.
T Consensus 178 ~ 178 (190)
T 1g8i_A 178 S 178 (190)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.70 E-value=1.5e-16 Score=167.92 Aligned_cols=148 Identities=16% Similarity=0.223 Sum_probs=122.0
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhccC----CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICVG----MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg----~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...+++.++++.|+..+++|.|+.+||..++. .......+.++|+.++ .|+||.|+++||..++..+.....
T Consensus 88 ~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D----~d~dG~I~~~Ef~~~l~~~~~~~~ 163 (256)
T 2jul_A 88 FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFD----ADGNGAIHFEDFVVGLSILLRGTV 163 (256)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSS----CSCCSEECSHHHHHHHHHHHSCCH
T ss_pred CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhc----cCCCCcCcHHHHHHHHHHHhccCh
Confidence 45678899999999755899999999998872 3445667888898655 577999999999999998887888
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc----cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSAS----ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~----~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||.|+||+|+.+||..++..... .......++..++.++.+|+.+|.|+||+|+++||..+|...|
T Consensus 164 ~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~ 243 (256)
T 2jul_A 164 HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDE 243 (256)
T ss_dssp HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCH
Confidence 999999999999999999999999999975421 0001111344678899999999999999999999999998765
No 46
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.70 E-value=1.3e-16 Score=156.44 Aligned_cols=138 Identities=14% Similarity=0.200 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~ 172 (844)
.++.+++.+.|+.+| ++|.|+.+||..++ |...+...+..+|+.++ .|+||.|+|+||+.++.... ....
T Consensus 24 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~~ 99 (169)
T 3qrx_A 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID----KDGSGTIDFEEFLTMMTAKMGERDS 99 (169)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHC----SSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc----CCCCCcCCHHHHHHHHHHHhcccCc
Confidence 456777888888877 89999999999887 66667778888888665 57799999999999987543 3345
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.+.++.+|+.||+|+||+|+.+||++++.... .. ..++.++.+|+.+|.|+||.|+|+||..+|...|
T Consensus 100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g--~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 100 REEILKAFRLFDDDNSGTITIKDLRRVAKELG--EN------LTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--CC------CCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC--CC------CCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 77899999999999999999999999997532 12 2366788999999999999999999999998765
No 47
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.70 E-value=1.6e-16 Score=164.42 Aligned_cols=146 Identities=15% Similarity=0.235 Sum_probs=118.5
Q ss_pred chHHHHHHHHHHHccc----CCCCcCHHHHhhccC--CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cC
Q 042007 98 ENDAWRSIERRFQQFA----VSGRLPKDKFGICVG--MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KK 170 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld----~dG~is~~eF~~~lg--~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~ 170 (844)
..++++++++.|+.+| +||.|+.+||..++. .......+.++|+.++ .|+||.|+|+||+.++.... ..
T Consensus 43 s~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D----~d~dG~I~~~Ef~~~~~~~~~~~ 118 (226)
T 2zfd_A 43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD----TKHNGILGFEEFARALSVFHPNA 118 (226)
T ss_dssp CHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHC----SSCSSSBCHHHHHHHHHHTSTTS
T ss_pred CHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhccCcccHHHHHHHHHHHc----CCCCCcCcHHHHHHHHHHHccCC
Confidence 4567777888888776 679999999999883 2334456778898666 57799999999999998776 45
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+++++.+|+.||.|+||+|+.+||++++..... +..++ ++..++.++.+|+.+|.|+||.|+|+||..+|...|
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~--~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~ 196 (226)
T 2zfd_A 119 PIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK--DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHP 196 (226)
T ss_dssp CHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSG
T ss_pred CHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCC--HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 67889999999999999999999999999964321 22333 555677788899999999999999999999999877
Q ss_pred C
Q 042007 249 N 249 (844)
Q Consensus 249 ~ 249 (844)
.
T Consensus 197 ~ 197 (226)
T 2zfd_A 197 S 197 (226)
T ss_dssp G
T ss_pred H
Confidence 4
No 48
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.69 E-value=5.4e-17 Score=157.67 Aligned_cols=134 Identities=10% Similarity=0.139 Sum_probs=107.9
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCC
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKD 171 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~ 171 (844)
+.++++++++.|+.+| ++|+|+.+||..++ |.......... +. .+++|.|+|+||+.++.... ...
T Consensus 11 t~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~----~~----~~~~~~i~f~ef~~~~~~~~~~~~ 82 (153)
T 3i5g_B 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNA----ML----KECPGQLNFTAFLTLFGEKVSGTD 82 (153)
T ss_dssp CHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHH----HH----HTSSSCCCSHHHHHTTTTTTTTCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHH----HH----HhccCCccHHHHHHHHHhhhcccc
Confidence 3468888888888888 89999999999887 66555443333 33 14578899999999987554 445
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.++.+|++||+|++|+||.+||++++...+ .++ .++.++.||+++|.| ||.|+|+||.++|....
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g--~~l------s~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~ 150 (153)
T 3i5g_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG--DNF------SKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSS--SCC------CHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred cHHHHHHHHhccccCCCCeEeHHHHHHHHHHcC--CcC------CHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence 788999999999999999999999999996532 223 366789999999988 99999999999998654
No 49
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.69 E-value=1.8e-16 Score=152.71 Aligned_cols=141 Identities=18% Similarity=0.297 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARL 176 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l 176 (844)
++++++++.|+.+| ++|.|+.+||..+..+.. .+.+.++|+.++ .|++|.|+|+||+.++.... ....++.+
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~l~~~~~-~~~~~~~~~~~D----~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ-NPLVQRVIDIFD----TDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHTTSGGGTT-CTTHHHHHHHHC----TTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCeEcHHHHHHhhcccc-chHHHHHHHHHC----CCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 46777888888887 899999999954444332 336788888666 57799999999999998765 44778899
Q ss_pred HHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 177 QIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 177 ~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+.+|+.||+|+||+|+.+||++++..... ..++ ++..++.+..+|+.+|.|+||.|+|+||..+|...+
T Consensus 78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-~~~~--~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 78 RFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLK--DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHHHHHHG-GGSC--HHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhc-cCCC--HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 99999999999999999999999975221 2233 344555566666669999999999999999998664
No 50
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.69 E-value=1.1e-16 Score=152.10 Aligned_cols=133 Identities=14% Similarity=0.182 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHH-hccCChH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWED-MTKKDLD 173 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~-~~~~~~~ 173 (844)
++++++++.|..+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+|+||+.++.. .......
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~~~ 78 (142)
T 2bl0_C 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEAD----ATGNGKIQFPEFLSMMGRRMKQTTSE 78 (142)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHC----TTCSSEEEHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC----cCCCCeeeHHHHHHHHHHHhcCCChH
Confidence 46777788888777 89999999999876 66667777888888665 577999999999999986 4455678
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+.++.+|+.+|+|++|+|+.+||+.++.... .. ..++.++.+|+.+| |+||.|+|+||..+|.
T Consensus 79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g--~~------~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 79 DILRQAFRTFDPEGTGYIPKAALQDALLNLG--DR------LKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHHHTCCSSCSCEEHHHHHHHHHHSS--SC------CCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CC------CCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 8999999999999999999999999996532 12 23567889999999 9999999999998764
No 51
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.69 E-value=3.4e-16 Score=151.76 Aligned_cols=136 Identities=13% Similarity=0.197 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~ 172 (844)
.++..++++.|..+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+|+||+.++... .....
T Consensus 19 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d----~~~~g~i~~~eF~~~~~~~~~~~~~ 94 (161)
T 3fwb_A 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYD----SEGRHLMKYDDFYIVMGEKILKRDP 94 (161)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC----TTSSSCEEHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----cCCCCeEeHHHHHHHHHHHHhcCCc
Confidence 456777888888777 79999999998887 66667778888888665 5779999999999999754 45567
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.+.++.+|+.||+|++|+|+.+||++++..... ...++.++.+|+.+|.|++|.|+|+||..+|.+
T Consensus 95 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGE--------TLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC--------CCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCC--------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 889999999999999999999999999975331 223677899999999999999999999999864
No 52
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.69 E-value=3.3e-16 Score=156.86 Aligned_cols=147 Identities=17% Similarity=0.238 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHccc-CCCCcCHHHHhhccC---C-CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 98 ENDAWRSIERRFQQFA-VSGRLPKDKFGICVG---M-GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld-~dG~is~~eF~~~lg---~-~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...+++++++.|+. + ++|.|+.+||..++. . ......+.++|+.++ .|++|.|+++||..++..+.....
T Consensus 23 ~~~el~~~f~~~D~-~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 2l2e_A 23 DKKELQQWYKGFFK-DCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFD----ADKNGYIDFKEFICALSVTSRGEL 97 (190)
T ss_dssp CSHHHHHHHHHHHH-HSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHC----SSSTTCEEHHHHHHHHTTSSCSCS
T ss_pred CHHHHHHHHHHHHH-hCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhc----CCCCCeEeHHHHHHHHHHHcCCCH
Confidence 34678888888886 5 799999999999872 2 234456788888666 577999999999999988877788
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhh----hccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLS----ASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~----~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||.|+||+|+.+||..++... +....+...+...++.++.+|+.+|.|+||+|+++||..++...|
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 2l2e_A 98 NDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP 177 (190)
T ss_dssp HHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred HHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence 9999999999999999999999999999652 211112212344678899999999999999999999999998876
Q ss_pred C
Q 042007 249 N 249 (844)
Q Consensus 249 ~ 249 (844)
.
T Consensus 178 ~ 178 (190)
T 2l2e_A 178 T 178 (190)
T ss_dssp H
T ss_pred H
Confidence 3
No 53
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.68 E-value=3.5e-16 Score=158.83 Aligned_cols=144 Identities=17% Similarity=0.205 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHccc-CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH
Q 042007 100 DAWRSIERRFQQFA-VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR 175 (844)
Q Consensus 100 ~~~~~l~~~F~~ld-~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~ 175 (844)
++++++++.|+. + ++|.|+.+||..++ +.......+.++|+.++ .|+||.|+++||..++..+.....+++
T Consensus 22 ~el~~~f~~~D~-~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D----~d~~G~i~~~Ef~~~~~~~~~~~~~~~ 96 (204)
T 1jba_A 22 AQLQEWYKKFLE-ECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFD----TNGDNTIDFLEYVAALNLVLRGTLEHK 96 (204)
T ss_dssp HHHHHHHHHHHS-SSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHC----CSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred HHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHc----CCCCCeEeHHHHHHHHHHHccCCHHHH
Confidence 566777777776 4 79999999999987 44456667888898666 577999999999999998877778899
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHhhhcccc---cc------ccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIVLSASENK---LS------NLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~---l~------~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
++.+|+.||.|+||+|+.+||+.++.......+ .. ......++.++.+|+.+|.|+||+|+++||..++..
T Consensus 97 ~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~ 176 (204)
T 1jba_A 97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176 (204)
T ss_dssp HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHc
Confidence 999999999999999999999999975421000 00 001145678999999999999999999999999986
Q ss_pred CC
Q 042007 247 MV 248 (844)
Q Consensus 247 ~~ 248 (844)
.|
T Consensus 177 ~~ 178 (204)
T 1jba_A 177 DK 178 (204)
T ss_dssp TT
T ss_pred Ch
Confidence 65
No 54
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.68 E-value=1.8e-16 Score=153.82 Aligned_cols=137 Identities=16% Similarity=0.289 Sum_probs=113.1
Q ss_pred hHHHHHHHHHHHccc--C-CCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc----
Q 042007 99 NDAWRSIERRFQQFA--V-SGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT---- 168 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~-dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~---- 168 (844)
.++.+++.+.|+.+| + +|.|+.+||..++ |...+...+.++|+.++ .|++|.|+|+||+.++....
T Consensus 14 ~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D----~~~~g~i~~~eF~~~~~~~~~~~~ 89 (161)
T 1dtl_A 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD----EDGSGTVDFDEFLVMMVRSMKDDS 89 (161)
T ss_dssp HHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC----TTSSSSBCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHHhcccc
Confidence 456777888888877 7 8999999999887 66667778888888666 57899999999999998764
Q ss_pred cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 169 KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 169 ~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.....+.++.+|+.+|+|+||+|+.+||++++.... ....++.++.+|+.+|.|+||.|+|+||..+|...
T Consensus 90 ~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g--------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 90 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG--------ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC----------CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--------CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 356788999999999999999999999999885422 12246778999999999999999999999999754
No 55
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.68 E-value=2.9e-16 Score=157.12 Aligned_cols=149 Identities=18% Similarity=0.247 Sum_probs=119.8
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhccC----CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICVG----MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg----~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...+++.++++.|+..+++|.|+.+||..++. .......+.++|+.++ .|+||.|+++||..++..+.....
T Consensus 22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~G~i~~~ef~~~~~~~~~~~~ 97 (190)
T 1fpw_A 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFD----KDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCC----SSCSSEECHHHHHHHHHHHSCCCS
T ss_pred CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHC----CCCCCcEeHHHHHHHHHHHccCCc
Confidence 34578889999998754899999999998872 1233456777888554 578999999999999998887778
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc----cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSAS----ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~----~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||.|+||+|+.+||..++..... ...+...+...++.+..+|+.+|.|+||+|+++||..++...|
T Consensus 98 ~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 1fpw_A 98 EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177 (190)
T ss_dssp THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 899999999999999999999999999965321 1111111334678899999999999999999999999998876
Q ss_pred C
Q 042007 249 N 249 (844)
Q Consensus 249 ~ 249 (844)
.
T Consensus 178 ~ 178 (190)
T 1fpw_A 178 S 178 (190)
T ss_dssp T
T ss_pred H
Confidence 3
No 56
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.68 E-value=6e-16 Score=155.18 Aligned_cols=148 Identities=18% Similarity=0.278 Sum_probs=119.7
Q ss_pred CchHHHHHHHHHHHcccCCCCcCHHHHhhccCC----CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 97 KENDAWRSIERRFQQFAVSGRLPKDKFGICVGM----GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~----~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
...+++.++++.|+..+++|.|+.+||..++.. ......+.++|+.++ .|++|.|+++||..++..+.....
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~g~i~~~Ef~~~~~~~~~~~~ 97 (193)
T 1bjf_A 22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFD----ANGDGTIDFREFIIALSVTSRGKL 97 (193)
T ss_dssp CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHC----SSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHHcCCCH
Confidence 345778888888887338999999999998732 223567888999666 577999999999999998887888
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--c--ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--E--NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~--~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||.|+||+|+.+||..++..... + ..++..+...++.+..+|+.+|.|+||+|+++||..++...+
T Consensus 98 ~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (193)
T 1bjf_A 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP 177 (193)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCT
T ss_pred HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCH
Confidence 999999999999999999999999999965321 1 123322234567899999999999999999999999997543
No 57
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.68 E-value=2.2e-16 Score=152.96 Aligned_cols=138 Identities=19% Similarity=0.358 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHccc---CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccC--
Q 042007 99 NDAWRSIERRFQQFA---VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKK-- 170 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld---~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~-- 170 (844)
.++..++++.|..+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+|+||+.++......
T Consensus 9 ~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~eF~~~~~~~~~~~~ 84 (158)
T 2jnf_A 9 SNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFD----PFGNGDIDFDSFKIIGARFLGEEV 84 (158)
T ss_dssp HHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHC----TTCCSEECHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHHhcccc
Confidence 356677777777776 78999999999887 66667777888888665 5779999999999999876533
Q ss_pred ---ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 171 ---DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 171 ---~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...+.++.+|+.||+|++|+|+.+||+.++..... . ..++.++.+|+.+|.|+||.|+|+||..+|...
T Consensus 85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 156 (158)
T 2jnf_A 85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDE--T------LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156 (158)
T ss_dssp CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCT--T------CCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSC
T ss_pred chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCC--c------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcc
Confidence 55678999999999999999999999999975321 2 236678899999999999999999999999765
Q ss_pred C
Q 042007 248 V 248 (844)
Q Consensus 248 ~ 248 (844)
+
T Consensus 157 ~ 157 (158)
T 2jnf_A 157 D 157 (158)
T ss_dssp C
T ss_pred C
Confidence 4
No 58
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.67 E-value=2e-16 Score=157.66 Aligned_cols=144 Identities=15% Similarity=0.239 Sum_probs=113.5
Q ss_pred chHHHHHHHHHHHcccC--------C--CCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCc-eeHHHHHHHHHH
Q 042007 98 ENDAWRSIERRFQQFAV--------S--GRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENG-ITKEEVRMFWED 166 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld~--------d--G~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~-I~f~EF~~~l~~ 166 (844)
..+++.++++.|+.+|. + |.|+.+||.. +...+......++|+.++ .|++|. |+|+||+.++..
T Consensus 15 s~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~~~~D----~d~~G~~I~~~EF~~~~~~ 89 (183)
T 1dgu_A 15 TKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICRVFS----TSPAKDSLSFEDFLDLLSV 89 (183)
T ss_dssp CHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHHHHHS----CSSSSCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHHHHhC----CCCCCCEecHHHHHHHHHH
Confidence 45678888888988874 7 9999999998 633222334567888654 577999 999999999987
Q ss_pred hccC-ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcc---ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHH
Q 042007 167 MTKK-DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASE---NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEI 242 (844)
Q Consensus 167 ~~~~-~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~---~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ 242 (844)
.... ..+++++.+|+.||+|++|+|+.+||+.++...... ..++ ++++++.++.+|+++|.|+||.|+|+||..
T Consensus 90 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 90 FSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS--ASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHH--HHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCC--HHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 7644 456799999999999999999999999999754321 1222 344555566799999999999999999999
Q ss_pred HHHcCC
Q 042007 243 LLRGMV 248 (844)
Q Consensus 243 ll~~~~ 248 (844)
+|...|
T Consensus 168 ~~~~~~ 173 (183)
T 1dgu_A 168 VISRSP 173 (183)
T ss_dssp HHCSSC
T ss_pred HHHhCh
Confidence 998765
No 59
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.67 E-value=3.8e-16 Score=148.85 Aligned_cols=135 Identities=20% Similarity=0.339 Sum_probs=112.2
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCC
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKD 171 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~ 171 (844)
..++..++.+.|..+| ++|.|+.+||..++ |...+...+..+|..++ .|++|.|+|+||+.++.... ...
T Consensus 6 ~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d----~~~~g~i~~~ef~~~~~~~~~~~~ 81 (147)
T 4ds7_A 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEID----VDGNHAIEFSEFLALMSRQLKCND 81 (147)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC----TTSSSEEEHHHHHHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhc----cCCCCcCcHHHHHHHHHHhccCCC
Confidence 3467778888888877 89999999998887 66667778888888665 57799999999999997653 335
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
.++.++.+|+.+|+|++|+|+.+||++++.... .. ..++.++.+|+.+| |++|.|+|+||..+|.
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--~~------~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIG--EK------LTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT--CC------CCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcC--CC------CCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 568899999999999999999999999997532 12 23677889999999 9999999999999875
No 60
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.67 E-value=5.1e-16 Score=157.87 Aligned_cols=147 Identities=14% Similarity=0.195 Sum_probs=120.4
Q ss_pred chHHHHHHHHHHHcccCCCCcCHHHHhhccC---CC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChH
Q 042007 98 ENDAWRSIERRFQQFAVSGRLPKDKFGICVG---MG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLD 173 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg---~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~ 173 (844)
..+++.++++.|+..+++|.|+.+||..++. .. .....+.++|+.++ .|++|.|+++||..++..+.....+
T Consensus 31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~G~i~~~Ef~~~~~~~~~~~~~ 106 (207)
T 2d8n_A 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFD----SNLDGTLDFKEYVIALHMTTAGKTN 106 (207)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHC----TTCCSEEEHHHHHHHHHHHSCSSSS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhc----CCCCCeEeHHHHHHHHHHHcCCCHH
Confidence 4567888888888733799999999999872 21 45667888898666 5779999999999999988776778
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--c----ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--E----NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~----~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
++++.+|+.||+|+||+|+.+||+.++..... + ..++..+...++.++.+|+++|.|+||+|+|+||..+|...
T Consensus 107 ~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 186 (207)
T 2d8n_A 107 QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLAN 186 (207)
T ss_dssp TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhC
Confidence 89999999999999999999999999975411 1 23432233567889999999999999999999999999876
Q ss_pred C
Q 042007 248 V 248 (844)
Q Consensus 248 ~ 248 (844)
|
T Consensus 187 ~ 187 (207)
T 2d8n_A 187 K 187 (207)
T ss_dssp H
T ss_pred h
Confidence 5
No 61
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.67 E-value=1.6e-16 Score=162.12 Aligned_cols=141 Identities=15% Similarity=0.230 Sum_probs=111.9
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc--CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccC---
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV--GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKK--- 170 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l--g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~--- 170 (844)
..++++++++.|+.+| +||.|+.+||..++ |... ..+++++.++ .|+||.|+|+||+.++......
T Consensus 24 s~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~~lg~~~---~~~~l~~~~d----~~~~g~i~~~EF~~~~~~~~~~~~~ 96 (208)
T 2ct9_A 24 SHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAINP---LGDRIINAFF----SEGEDQVNFRGFMRTLAHFRPIEDN 96 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECTGGGGGCHHHHTST---THHHHHHTTS----CTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHcCCCC---cHHHHHHHHc----CCCCCcCcHHHHHHHHHhhccccch
Confidence 4567888888898888 89999999999875 3332 2466777554 5779999999999999866421
Q ss_pred -------------ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeH
Q 042007 171 -------------DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEM 237 (844)
Q Consensus 171 -------------~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~ 237 (844)
..+++++.+|+.||+|+||+||.+||++++.... +..++ ++++++.++.+|+++|.|+||.|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~-g~~~s--~~~~~~l~~~~~~~~D~d~dG~Is~ 173 (208)
T 2ct9_A 97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV-GVNIS--DEQLGSIADRTIQEADQDGDSAISF 173 (208)
T ss_dssp ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHS-CTTCC--HHHHHHHHHHHHHHHCSSSSSSEEH
T ss_pred hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHh-CCCCC--HHHHHHHHHHHHHHhCCCCCCcCcH
Confidence 2678999999999999999999999999997541 12233 4455666677799999999999999
Q ss_pred HHHHHHHHcCC
Q 042007 238 WQLEILLRGMV 248 (844)
Q Consensus 238 ~EF~~ll~~~~ 248 (844)
+||..+|...+
T Consensus 174 ~EF~~~~~~~~ 184 (208)
T 2ct9_A 174 TEFVKVLEKVD 184 (208)
T ss_dssp HHHHHTTTTSC
T ss_pred HHHHHHHhccC
Confidence 99999997654
No 62
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.66 E-value=5.1e-17 Score=155.60 Aligned_cols=129 Identities=16% Similarity=0.233 Sum_probs=103.9
Q ss_pred HHHHHHcccCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHH-hcccCCCCCCceeHHHHHHHHHHh------ccCChHH
Q 042007 105 IERRFQQFAVSGRLPKDKFGICV---GMGESTEFSVGVFEAL-ARRRKVNTENGITKEEVRMFWEDM------TKKDLDA 174 (844)
Q Consensus 105 l~~~F~~ld~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l-~~~~~~d~dG~I~f~EF~~~l~~~------~~~~~~~ 174 (844)
+++.|+. +++|.|+.+||..++ |...+...+..+|..+ + .|++|.|+|+||+.++... ......+
T Consensus 9 ~F~~~D~-d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D----~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 83 (148)
T 1m45_A 9 IFTLFDK-KGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSS----LRDASSLTLDQITGLIEVNEKELDATTKAKTE 83 (148)
T ss_dssp CHHHHCT-TCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--C----C--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHCC-CCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhC----CCCCCeEcHHHHHHHHHHHHhhccccccccHH
Confidence 3444443 489999999998886 6666667777777755 4 5779999999999999876 5556778
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.++.+|+.||+|++|+|+.+||+.++.... .. ..++.++.+|+.+|.|+||.|+|+||..+|..
T Consensus 84 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~------~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLG--EK------LTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHHHHST--TC------CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcC--CC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 999999999999999999999999997532 12 23667889999999999999999999999864
No 63
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.66 E-value=1.5e-16 Score=161.18 Aligned_cols=144 Identities=19% Similarity=0.250 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDA 174 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~ 174 (844)
.+++++++.|+.+| ++|.|+.+||..++ |...+...+.++|+.++ .|+||.|+|+||+.++........++
T Consensus 34 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D----~d~dg~i~~~ef~~~~~~~~~~~~~~ 109 (204)
T 3e3r_A 34 SGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWD----RNGSGTLDLEEFLRALRPPMSQAREA 109 (204)
T ss_dssp ------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHC----TTCSSSBCHHHHHHHTSCCCCHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhc----cCCCCcCcHHHHHHHHHhhcCchHHH
Confidence 45666777777777 89999999999887 55666778888888665 57799999999999987655445678
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC-CCCCceeHHHHHHHHHcCC
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP-DCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~-d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+|+.||+|+||+|+.+||++++..... ..........++.++.+|+.+|. |+||.|+|+||..+|....
T Consensus 110 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 110 VIAAAFAKLDRSGDGVVTVDDLRGVYSGRAH-PKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHCCCTTC-HHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHccccC-CccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 8999999999999999999999999853211 00011133456789999999999 9999999999999998664
No 64
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.65 E-value=1.1e-15 Score=150.41 Aligned_cols=135 Identities=20% Similarity=0.287 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhh----cc---CCCCCHHHHH-----------HHHHHHhcccCCCCCCceeHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGI----CV---GMGESTEFSV-----------GVFEALARRRKVNTENGITKEE 159 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~----~l---g~~~~~~~~~-----------~lf~~l~~~~~~d~dG~I~f~E 159 (844)
++.+++++.|+.+| +||.|+.+||.. ++ |...+...+. .+|..++ .|+||.|+++|
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D----~d~dg~i~~~E 79 (176)
T 1nya_A 4 IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG----VGSDGSLTEEQ 79 (176)
T ss_dssp HHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHT----SCTTCCBCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhC----CCCCCeEcHHH
Confidence 56778888888888 899999999988 33 6655555454 5666544 67899999999
Q ss_pred HHHHHHHhccCCh--------HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCC
Q 042007 160 VRMFWEDMTKKDL--------DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDC 231 (844)
Q Consensus 160 F~~~l~~~~~~~~--------~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~ 231 (844)
|+.++........ ++.++.+|+.||+|+||+|+.+||+.++.... + .++.++.+|+.+|.|+
T Consensus 80 f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g----~------~~~~~~~~~~~~D~d~ 149 (176)
T 1nya_A 80 FIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG----M------SKAEAAEAFNQVDTNG 149 (176)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT----C------CHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC----C------CHHHHHHHHHHhCCCC
Confidence 9999987654333 46799999999999999999999999996532 2 3567889999999999
Q ss_pred CCceeHHHHHHHHHcCC
Q 042007 232 KGYIEMWQLEILLRGMV 248 (844)
Q Consensus 232 dG~It~~EF~~ll~~~~ 248 (844)
||+|+|+||..+|...-
T Consensus 150 dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 150 NGELSLDELLTAVRDFH 166 (176)
T ss_dssp SSEEEHHHHHHHHSCCS
T ss_pred CCCCcHHHHHHHHHHHh
Confidence 99999999999997653
No 65
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.65 E-value=9e-16 Score=148.94 Aligned_cols=138 Identities=18% Similarity=0.307 Sum_probs=114.7
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CC
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KD 171 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~ 171 (844)
..+++.++++.|..+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+++||+.++..... ..
T Consensus 15 s~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~i~~~ef~~~~~~~~~~~~ 90 (162)
T 1top_A 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD----EDGSGTIDFEEFLVMMVRQMKEDA 90 (162)
T ss_dssp CHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHC----TTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHc----CCCCCcEeHHHHHHHHHHHhcccc
Confidence 3467888999999988 89999999998887 66667778888888665 577999999999999876532 22
Q ss_pred ---hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 172 ---LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 172 ---~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..+.++.+|+.+|.|++|+|+.+||+.++.... . ...++.++.+|+.+|.|+||.|+|+||..+|...
T Consensus 91 ~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--E------HVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT--C------CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--C------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 567899999999999999999999999996532 1 1235678899999999999999999999999753
No 66
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.65 E-value=3e-16 Score=149.29 Aligned_cols=134 Identities=14% Similarity=0.245 Sum_probs=109.3
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~ 172 (844)
.++++++++.|+.+| ++|.|+.+||..++ |...+...+..++. .++|.|+|+||+.++... .....
T Consensus 3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~--------~~~g~i~~~eF~~~~~~~~~~~~~ 74 (143)
T 3j04_B 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS--------EAPGPINFTMFLTMFGEKLNGTDP 74 (143)
T ss_dssp HHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTT--------TSSSCCCHHHHHHHHHHTTTSSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHH--------hCCCCcCHHHHHHHHHHHhccCCc
Confidence 357888999999988 79999999999887 55555444444333 158999999999999864 34567
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++.++.+|+.||+|+||+||.+||++++.... . ...++.++.+|+.+|.|+||.|+|+||..+|...|
T Consensus 75 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 142 (143)
T 3j04_B 75 EDVIRNAFACFDEEASGFIHEDHLRELLTTMG--D------RFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142 (143)
T ss_dssp HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSS--S------CCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--C------CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhccC
Confidence 88999999999999999999999999997532 1 22367789999999999999999999999998764
No 67
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.65 E-value=6.2e-16 Score=153.13 Aligned_cols=137 Identities=14% Similarity=0.251 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLD 173 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~ 173 (844)
+++.++++.|+.+| ++|.|+.+||..++ |...+...+..+|+.++ .|+||.|+|+||+.++.... ....+
T Consensus 8 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD----ADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp SHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHC----TTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc----cCCCCCCcHHHHHHHHHHHccCcccH
Confidence 46677778887777 89999999999887 66667777888888665 57899999999999987643 33456
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+.++.+|+.||+|++|+|+.+||++++..... ...++.++.+|+.+|.|+||.|+|+||..+|...+
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~--------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGE--------KLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC----------CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--------CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 78999999999999999999999999965321 12356788999999999999999999999997664
No 68
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.65 E-value=1.6e-15 Score=148.27 Aligned_cols=135 Identities=12% Similarity=0.190 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CC-CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCC
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GM-GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKD 171 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~-~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~ 171 (844)
.++..++++.|+.+| +||.|+.+||..++ |. ..+...+..++. +.||.|+|+||+.++... ....
T Consensus 21 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~--------~~dg~i~~~eF~~~~~~~~~~~~ 92 (166)
T 2mys_B 21 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK--------EASGPINFTVFLTMFGEKLKGAD 92 (166)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH--------HCCCCcCHHHHHHHHHHHhccCC
Confidence 356777788888777 89999999999887 55 545544555544 237999999999999765 3445
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
.++.++.+|+.||+|+||+|+.+||+.++.... .. ..++.++.+|+.+|.|+||.|+|+||..+|.....
T Consensus 93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~------~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~~~ 162 (166)
T 2mys_B 93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG--GR------FTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGED 162 (166)
T ss_pred cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcC--CC------CCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhccc
Confidence 778999999999999999999999999996532 12 23667889999999999999999999999987653
No 69
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.64 E-value=1.9e-15 Score=171.37 Aligned_cols=179 Identities=13% Similarity=0.149 Sum_probs=120.3
Q ss_pred CCccCcccccCCC--CCceEEEEEec-------------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhcccc
Q 042007 573 FEWHPFSITSAPG--DYYLSVHIRTL-------------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNAN 637 (844)
Q Consensus 573 ~e~HPFTI~s~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 637 (844)
.+.|||||+|+|. ++.+.++|++. |..|..|.++ ++|
T Consensus 208 l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l-----------~~G----------------- 259 (435)
T 1f20_A 208 LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-----------QAD----------------- 259 (435)
T ss_dssp CCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTC-----------CTT-----------------
T ss_pred CCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhC-----------CCC-----------------
Confidence 4899999999997 47899999864 6678877542 355
Q ss_pred ccccccCcCEEEEeC-ccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEE
Q 042007 638 FEQIQASFPKILIKG-PYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWV 716 (844)
Q Consensus 638 ~~~~~~~~~~v~IdG-PyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~ 716 (844)
.+|.|.| |+|.+..+......+||||||+||||++|+++++....+... ....++.|+|+
T Consensus 260 --------d~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~-----------~~~~~~~L~~G 320 (435)
T 1f20_A 260 --------DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKG-----------MNPCPMVLVFG 320 (435)
T ss_dssp --------CEEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHC-----------CCCCCEEEEEE
T ss_pred --------CEEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhcc-----------CCCCCEEEEEe
Confidence 6799999 677775443345789999999999999999999876432110 13468999999
Q ss_pred eCCCC-hhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCC-hHH
Q 042007 717 TREQG-SFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPN-WRK 794 (844)
Q Consensus 717 ~R~~~-~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd-~~~ 794 (844)
+|+.+ ++ +|.++|+++.+.. ..++++..+++...... .. +.+ .=+.+ -.+
T Consensus 321 ~R~~~~d~-ly~~El~~~~~~~--~~~~l~~a~Sr~~~~~k--~y-----------------Vq~------~l~~~l~~~ 372 (435)
T 1f20_A 321 CRQSKIDH-IYREETLQAKNKG--VFRELYTAYSREPDRPK--KY-----------------VQD------VLQEQLAES 372 (435)
T ss_dssp ESCTTTSC-TTHHHHHHHHHTT--SEEEEEEEESSCTTSCC--CC-----------------HHH------HHHHHSHHH
T ss_pred ecccccch-hHHHHHHHHHHcC--CccEEEEEECCCCCCCC--cc-----------------hhh------HHHhhhHHH
Confidence 99997 44 7889998887642 34567777776421100 00 000 00000 011
Q ss_pred HHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhhc
Q 042007 795 VFGQLATDHESSRIGVFYCGSATLTKTLKELCLEFS 830 (844)
Q Consensus 795 v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~~ 830 (844)
+.+.+.. ....||+|||++|+++|++++.+..
T Consensus 373 ~~~~l~~----~~~~vYvCGp~~M~~~V~~~L~~i~ 404 (435)
T 1f20_A 373 VYRALKE----QGGHIYVCGDVTMAADVLKAIQRIM 404 (435)
T ss_dssp HHHHHHT----SCCEEEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----CCcEEEEeCChhHHHHHHHHHHHHH
Confidence 2222211 1247999999999999999887754
No 70
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.64 E-value=2.3e-15 Score=143.81 Aligned_cols=136 Identities=16% Similarity=0.210 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCC
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKD 171 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~ 171 (844)
++..++++.|..+| ++|.|+.+||..++ |...+...+..+++.+...+ .|+ |.|+|+||+.++... ....
T Consensus 5 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d-~~~-g~i~~~eF~~~~~~~~~~~~~~ 82 (149)
T 2mys_C 5 AAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEE-MNA-AAITFEEFLPMLQAAANNKDQG 82 (149)
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhcc-ccC-CcCcHHHHHHHHHHHhccCCcc
Confidence 46677777787777 89999999998876 66666777888888661111 577 999999999999775 3446
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..+.++.+|+.||+|++|+|+.+||+.++..... .+ .++.++.+|+. |.|++|.|+|+||..+|..
T Consensus 83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~~------~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE--KM------TEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCC--CC------CHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 6789999999999999999999999999975421 22 35678899999 9999999999999999864
No 71
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=159.26 Aligned_cols=140 Identities=14% Similarity=0.216 Sum_probs=109.9
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc--CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-----
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV--GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT----- 168 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l--g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~----- 168 (844)
..++++++++.|+.+| +||.|+.+||..+. |.... +.++|+.++ .|+||.|+|+||+.++....
T Consensus 24 s~~~~~~l~~~F~~~D~d~dG~I~~~El~~~~~lg~~~~---~~~l~~~~D----~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 24 SQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVNPL---GDRIIESFF----PDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp CHHHHHHHHHHHHHHCSSCSSCCCHHHHHTCHHHHHSTT---HHHHHHTTS----CSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHhcCCCcc---HHHHHHHhC----CCCCCcCcHHHHHHHHHHhcccchh
Confidence 3467888888888887 89999999998862 22222 667777544 57899999999999998765
Q ss_pred ------------cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCcee
Q 042007 169 ------------KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIE 236 (844)
Q Consensus 169 ------------~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It 236 (844)
.....++++.+|+.||+|+||+|+.+||++++.... +..++ ++++++.+..+|+++|.|+||.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~-g~~~~--~~~~~~~~~~~~~~~D~d~dG~Is 173 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMV-GVQVT--EEQLENIADRTVQEADEDGDGAVS 173 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSC-CSCCC--HHHHHHHHHHHHHHHCSSCSSSEE
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc-CCCCC--HHHHHHHHHHHHHHcCCCCCCcCc
Confidence 345678999999999999999999999999997541 12233 444555666666669999999999
Q ss_pred HHHHHHHHHcC
Q 042007 237 MWQLEILLRGM 247 (844)
Q Consensus 237 ~~EF~~ll~~~ 247 (844)
|+||..+|...
T Consensus 174 ~~EF~~~~~~~ 184 (202)
T 2bec_A 174 FVEFTKSLEKM 184 (202)
T ss_dssp HHHHHHTTTTS
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 72
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.64 E-value=1.4e-15 Score=153.55 Aligned_cols=144 Identities=17% Similarity=0.271 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHcccCCCCcCHHHHhhccCCCCC----HHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH
Q 042007 100 DAWRSIERRFQQFAVSGRLPKDKFGICVGMGES----TEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR 175 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~----~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~ 175 (844)
+++.++++.|+.-+++|.|+.+||..++..... ...+.++|+.++ .|+||.|+++||..++..+.....+++
T Consensus 14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D----~d~~G~I~~~Ef~~~~~~~~~~~~~~~ 89 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFD----FNKDGYIDFMEYVAALSLVLKGKVDQK 89 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHC----TTCSSCEEHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHC----CCCCCeEcHHHHHHHHHHHccCchHHH
Confidence 356777888886238999999999998844322 234677787655 578999999999999998887788999
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++.+|+.||.|+||+|+.+||+.++.......... .....++.+..+|+.+|.|+||+|+++||..+|...+
T Consensus 90 ~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 161 (198)
T 2r2i_A 90 LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCN-EAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDE 161 (198)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSS-SCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCH
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCC-chhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCH
Confidence 99999999999999999999999997543211000 1223456689999999999999999999999997654
No 73
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.64 E-value=2e-16 Score=158.23 Aligned_cols=135 Identities=13% Similarity=0.178 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhccCC--------------CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICVGM--------------GESTEFSVGVFEALARRRKVNTENGITKEEVRMF 163 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~lg~--------------~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~ 163 (844)
++..++.+.|+.+| +||.|+.+||..++.. ......+..+|+.++ .|++|.|+++||+.+
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----~d~~g~i~~~ef~~~ 112 (191)
T 3khe_A 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVD----FDRNGYIEYSEFVTV 112 (191)
T ss_dssp TTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTC----TTCSSSEEHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhC----CCCCCcCCHHHHHHH
Confidence 45566677777766 8999999999988731 122334556666443 578999999999999
Q ss_pred HHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 042007 164 WEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEIL 243 (844)
Q Consensus 164 l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~l 243 (844)
+........++.++.+|+.+|.|+||+|+.+||++++. ... ..++.++.+|+.+|.|+||.|+|+||..+
T Consensus 113 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~----~~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~ 182 (191)
T 3khe_A 113 CMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG----VTE------VDDETWHQVLQECDKNNDGEVDFEEFVEM 182 (191)
T ss_dssp HSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT----SSC------CCHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc----cCC------CCHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 86655556778999999999999999999999999885 222 23677889999999999999999999999
Q ss_pred HHcCC
Q 042007 244 LRGMV 248 (844)
Q Consensus 244 l~~~~ 248 (844)
|.+..
T Consensus 183 ~~~~~ 187 (191)
T 3khe_A 183 MQKIC 187 (191)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 97653
No 74
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.64 E-value=2.7e-16 Score=187.71 Aligned_cols=189 Identities=13% Similarity=0.152 Sum_probs=127.4
Q ss_pred CCcEEEEEcCCCCCCCccCcccccCCC--CCceEEEEEec-------------CCchHHHHHHHHhhcCCCCCCCCCCCc
Q 042007 559 SGMYLFVKCPDLSPFEWHPFSITSAPG--DYYLSVHIRTL-------------GDWTTELKQRFEKVCEAPAPAKPNRGN 623 (844)
Q Consensus 559 pGQyv~l~~p~~s~~e~HPFTI~s~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~~~ 623 (844)
|+||+...+|.+ ++|||||+|+|. ++.+.++|++. |..|..|.++ .+|
T Consensus 418 p~~~l~~~lp~l---~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l-----------~~G--- 480 (688)
T 1tll_A 418 PATLLLTQLSLL---QPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-----------QAD--- 480 (688)
T ss_dssp CHHHHHHHSCBC---CCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTC-----------CTT---
T ss_pred CHHHHHHhCccc---ceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhC-----------CCC---
Confidence 566666666654 899999999997 47899999865 6678877542 355
Q ss_pred chhhhhhhhhccccccccccCcCEEEEeC-ccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcC
Q 042007 624 LMRMETKSAANNANFEQIQASFPKILIKG-PYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLEN 702 (844)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~v~IdG-PyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~ 702 (844)
.+|.|.| |.|.+..+......+||||||+||||++|+++++....+...
T Consensus 481 ----------------------d~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~-------- 530 (688)
T 1tll_A 481 ----------------------DVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKG-------- 530 (688)
T ss_dssp ----------------------SEEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSC--------
T ss_pred ----------------------CEEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhcc--------
Confidence 6799999 666765433345789999999999999999999876532110
Q ss_pred CCCCCCcEEEEEEEeCCCC-hhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccC
Q 042007 703 GFKKGPERAYFYWVTREQG-SFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSES 781 (844)
Q Consensus 703 ~~~~~~~~v~l~W~~R~~~-~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~ 781 (844)
....+++|+|++|+.+ ++ .|.++|.++.+.. ..++++..+++....... . +.+
T Consensus 531 ---~~~~~v~L~~G~R~~~~D~-ly~dEL~~~~~~~--~~~~l~~a~Sr~~~~~k~--y-----------------Vq~- 584 (688)
T 1tll_A 531 ---MNPCPMVLVFGCRQSKIDH-IYREETLQAKNKG--VFRELYTAYSREPDRPKK--Y-----------------VQD- 584 (688)
T ss_dssp ---CCCCCEEEEEEESCTTTTC-TTHHHHHHHHHTT--SEEEEEEEESSCTTSCCC--C-----------------HHH-
T ss_pred ---CCCCCEEEEEEeccchhhh-hHHHHHHHHHHcC--CceEEEEEECCCCCCCcc--c-----------------hhh-
Confidence 1356899999999997 44 6788898887542 356777777764221000 0 000
Q ss_pred cccccccCCC-hHHHHHHHHhhCCCCcEEEEEeCChhHHHHHHHHHHhh
Q 042007 782 RIKTHFARPN-WRKVFGQLATDHESSRIGVFYCGSATLTKTLKELCLEF 829 (844)
Q Consensus 782 ~~~~~~gRPd-~~~v~~~~~~~~~~~~v~V~~CGP~~m~~~vr~~~~~~ 829 (844)
.=+-+ ..++...+.. ....||+|||++|+++|++++.+.
T Consensus 585 -----~l~~~l~~~l~~~l~~----~~~~vYvCGp~~M~~~V~~~L~~i 624 (688)
T 1tll_A 585 -----VLQEQLAESVYRALKE----QGGHIYVCGDVTMAADVLKAIQRI 624 (688)
T ss_dssp -----HHHHSSHHHHHHHHHT----SCCEEEEEEEHHHHHHHHHHHHHH
T ss_pred -----hhHHhHHHHHHHhhcc----CCcEEEEeCCHHHHHHHHHHHHHH
Confidence 00001 1222222221 124799999999999999988875
No 75
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.64 E-value=8.3e-16 Score=149.24 Aligned_cols=137 Identities=18% Similarity=0.241 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHccc----CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc---c
Q 042007 100 DAWRSIERRFQQFA----VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT---K 169 (844)
Q Consensus 100 ~~~~~l~~~F~~ld----~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~---~ 169 (844)
++++++++.|+.+| ++|.|+.+||..++ |...+...+.+++..++ +++|.|+|+||+.++.... .
T Consensus 6 ~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d-----~~~g~i~~~eF~~~~~~~~~~~~ 80 (159)
T 2ovk_C 6 DEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKK-----MGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSS-----TTSCEEEHHHHHHHHHHHTTCST
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc-----CCCCeEcHHHHHHHHHHHhhccC
Confidence 45556666666554 89999999999887 56666666666665432 2479999999999986432 3
Q ss_pred CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHH--HhCCCCCCceeHHHHHHHHHcC
Q 042007 170 KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIME--KLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 170 ~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~--~~D~d~dG~It~~EF~~ll~~~ 247 (844)
....+.++.+|+.||+|++|+|+.+||++++.... . ...++.++.+|+ ++|.|+||.|+|+||..+|...
T Consensus 81 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG--E------RITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSS--S------CCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC--C------CCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 45688999999999999999999999999997532 1 223667889999 8999999999999999999877
Q ss_pred CC
Q 042007 248 VN 249 (844)
Q Consensus 248 ~~ 249 (844)
|.
T Consensus 153 ~~ 154 (159)
T 2ovk_C 153 PF 154 (159)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 76
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.63 E-value=1.8e-16 Score=159.25 Aligned_cols=136 Identities=18% Similarity=0.233 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDA 174 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~ 174 (844)
++.+++++.|+.+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+|+||+.++..+.....++
T Consensus 7 ~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D----~d~dG~I~~~EF~~~~~~~~~~~~~~ 82 (188)
T 1s6i_A 7 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD----IDKSGTIDYGEFIAATVHLNKLEREE 82 (188)
T ss_dssp TTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTC----TTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcC----CCCCCeEeHHHHHHHHHHHhccCHHH
Confidence 34556777777777 89999999999887 44555667778887554 57899999999999987665555567
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
.++.+|+.||+|+||+|+.+||++++.... ++ ++.++.+|+.+|.|+||.|+|+||..+|.....
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g----~~------~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 147 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKDFG----LD------DIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTTTT----CC------TTHHHHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcC----CC------HHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcCC
Confidence 899999999999999999999999985321 22 345788999999999999999999999976653
No 77
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.63 E-value=2.2e-15 Score=150.87 Aligned_cols=135 Identities=19% Similarity=0.261 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHcc-c--CCCCcCHHHHhhcc-------CCCCCHHHHHHHH-----------HHHhcccCCCCCCceeH
Q 042007 99 NDAWRSIERRFQQF-A--VSGRLPKDKFGICV-------GMGESTEFSVGVF-----------EALARRRKVNTENGITK 157 (844)
Q Consensus 99 ~~~~~~l~~~F~~l-d--~dG~is~~eF~~~l-------g~~~~~~~~~~lf-----------~~l~~~~~~d~dG~I~f 157 (844)
.++.+++++.|+.+ | +||.|+.+||..++ |.........+++ ..++ .|+||.|++
T Consensus 8 ~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D----~d~dG~i~~ 83 (191)
T 2ccm_A 8 DFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYAD----ENEDEQVTK 83 (191)
T ss_dssp HHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHC----TTCSSCEEH
T ss_pred HHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCCCeECH
Confidence 45566777777777 6 89999999998776 5555555666666 4333 678999999
Q ss_pred HHHHHHHHHhcc---------CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhC
Q 042007 158 EEVRMFWEDMTK---------KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLD 228 (844)
Q Consensus 158 ~EF~~~l~~~~~---------~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D 228 (844)
+||+.++..... ...++.++.+|+.+|+|+||+|+.+||+.++.... + .++.++.+|+.+|
T Consensus 84 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g----~------~~~~~~~~~~~~D 153 (191)
T 2ccm_A 84 EEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG----I------PKSDCDAAFDTLS 153 (191)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT----C------CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC----C------CHHHHHHHHHHhC
Confidence 999999876532 23357899999999999999999999999996432 2 2567889999999
Q ss_pred CCCCCceeHHHHHHHHHcC
Q 042007 229 PDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 229 ~d~dG~It~~EF~~ll~~~ 247 (844)
.|+||.|+++||..++.+.
T Consensus 154 ~d~dG~i~~~Ef~~~~~~~ 172 (191)
T 2ccm_A 154 DGGKTMVTREIFARLWTEY 172 (191)
T ss_dssp TTTTSCCBHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999765
No 78
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.63 E-value=2.6e-15 Score=154.90 Aligned_cols=132 Identities=13% Similarity=0.124 Sum_probs=109.2
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL 172 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~ 172 (844)
..++.+++++.|+.+| ++|.|+.+||..++ |...+...+.++++.++ .|+||.|+|+||+.++..+
T Consensus 46 ~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D----~d~dg~I~~~EF~~~~~~~----- 116 (220)
T 3sjs_A 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFD----TDFNGHISFYEFMAMYKFM----- 116 (220)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHC----TTCSSCBCHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHH-----
Confidence 4467788888888887 89999999999887 55667778888888665 5779999999999998764
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++++.+|+.||+|+||+|+.+||++++..... .+ .++.++.+|+.+| |+||.|+|+||..+|...+
T Consensus 117 -~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~~------~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 117 -ELAYNLFVMNARARSGTLEPHEILPALQQLGF--YI------NQRTSLLLHRLFA-RGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp -HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTC--CC------CHHHHHHHHHHHC---CCSEEHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCC--CC------CHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHH
Confidence 67999999999999999999999999975432 22 3567889999999 9999999999999997553
No 79
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=156.24 Aligned_cols=144 Identities=14% Similarity=0.212 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHcccCCCCcCHHHHhhccCCCCC----HHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH
Q 042007 100 DAWRSIERRFQQFAVSGRLPKDKFGICVGMGES----TEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR 175 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~----~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~ 175 (844)
+++.++++.|+.-+++|.|+.+||..++..... ...+.++|+.++ .|+||.|+|+||+.++..+.....+++
T Consensus 19 ~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D----~d~dG~I~~~Ef~~~~~~~~~~~~~~~ 94 (211)
T 2ggz_A 19 QETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFD----TNKDGFVDFLEFIAAVNLIMQEKMEQK 94 (211)
T ss_dssp -----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHC----TTCSSEEEHHHHHHHHHHHSCSSHHHH
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHc----CCCCCeEeHHHHHHHHHHhccCchHHH
Confidence 455556666665227999999999999844322 234677788655 578999999999999998877788999
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
++.+|+.||.|+||+|+.+||++++......... .....++.++.+|+.+|.|+||.|+++||..+|...+.
T Consensus 95 l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 166 (211)
T 2ggz_A 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ--QTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQD 166 (211)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCC--CSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTT
T ss_pred HHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCC--ccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHH
Confidence 9999999999999999999999999754321100 12234567899999999999999999999999986653
No 80
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.63 E-value=1e-15 Score=147.95 Aligned_cols=137 Identities=19% Similarity=0.231 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHcc----cCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc--C
Q 042007 100 DAWRSIERRFQQF----AVSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK--K 170 (844)
Q Consensus 100 ~~~~~l~~~F~~l----d~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~--~ 170 (844)
+++.++++.|..+ +++|.|+.+||..++ |...+...+..+ . .-+.|++|.|+|+||+.++..... .
T Consensus 6 ~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~----~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 6 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-G----GTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-T----CCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-H----hhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 4455555555554 468999999999887 555555545554 3 222678999999999999987654 5
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHH--hCCCCCCceeHHHHHHHHHcCC
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEK--LDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~--~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.++.+|+.||+|++|+|+.+||+.++.... .. ..++.++.+|+. +|.|++|.|+|+||..+|...|
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALG--ER------LSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSS--SC------CCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CC------CCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCC
Confidence 6788999999999999999999999999997532 12 236678899999 9999999999999999998776
Q ss_pred C
Q 042007 249 N 249 (844)
Q Consensus 249 ~ 249 (844)
.
T Consensus 153 ~ 153 (156)
T 1wdc_C 153 Y 153 (156)
T ss_dssp C
T ss_pred C
Confidence 3
No 81
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.63 E-value=2.2e-15 Score=146.69 Aligned_cols=132 Identities=17% Similarity=0.227 Sum_probs=102.7
Q ss_pred HHHHHHHHHccc--CCCCcCHHHHhhcc-------CCCCCHHHHHHH-----------HHHHhcccCCCCCCceeHHHHH
Q 042007 102 WRSIERRFQQFA--VSGRLPKDKFGICV-------GMGESTEFSVGV-----------FEALARRRKVNTENGITKEEVR 161 (844)
Q Consensus 102 ~~~l~~~F~~ld--~dG~is~~eF~~~l-------g~~~~~~~~~~l-----------f~~l~~~~~~d~dG~I~f~EF~ 161 (844)
.+++++.|+.+| +||.|+.+||..++ |...+...+.++ |..++ .|+||.|+++||.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D----~d~~g~i~~~ef~ 78 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD----RDGDQRITREEFV 78 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHC----TTSSSCEEHHHHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhC----CCCCCcCcHHHHH
Confidence 345566666666 89999999998863 665555545443 55444 5789999999999
Q ss_pred HHHHHhccCCh-------HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCc
Q 042007 162 MFWEDMTKKDL-------DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGY 234 (844)
Q Consensus 162 ~~l~~~~~~~~-------~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~ 234 (844)
.++........ ++.++.+|+.+|+|+||+|+.+||+.++.... + .++.++.+|+.+|.|+||.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~----~------~~~~~~~~~~~~D~d~dg~ 148 (166)
T 3akb_A 79 TGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG----V------PEDLARQAAAALDTDGDGK 148 (166)
T ss_dssp HTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT----C------CHHHHHHHHHHHCTTCSSB
T ss_pred HHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----C------CHHHHHHHHHHhCCCCCCc
Confidence 99876543221 34599999999999999999999999996532 2 3567889999999999999
Q ss_pred eeHHHHHHHHHcC
Q 042007 235 IEMWQLEILLRGM 247 (844)
Q Consensus 235 It~~EF~~ll~~~ 247 (844)
|+++||..+|.+.
T Consensus 149 i~~~ef~~~~~~~ 161 (166)
T 3akb_A 149 VGETEIVPAFARY 161 (166)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999999999754
No 82
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.62 E-value=2.7e-15 Score=145.12 Aligned_cols=133 Identities=9% Similarity=0.197 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~ 172 (844)
.++..++++.|+.+| ++|.|+.+||..++ |...+...+..++. ++||.|+|+||+.++... .....
T Consensus 14 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~--------~~~g~i~~~eF~~~~~~~~~~~~~ 85 (156)
T 1wdc_B 14 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK--------EAPGPLNFTMFLSIFSDKLSGTDS 85 (156)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT--------TSSSCCCHHHHHHHHHHHTCSCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH--------hCCCcCcHHHHHHHHHHHhcCCCh
Confidence 346667777777777 89999999999887 55555544444432 458999999999999764 44567
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++.++.+|+.||+|++|+|+.+||+.++.... ..+ .++.++.+|+.+|.| ||.|+|+||..+|....
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~------~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_B 86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMG--DNF------NKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG 152 (156)
T ss_dssp HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSS--SCC------CHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhC--CCC------CHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCc
Confidence 88999999999999999999999999997532 122 366789999999999 99999999999998664
No 83
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.62 E-value=1.1e-15 Score=152.22 Aligned_cols=133 Identities=16% Similarity=0.181 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR 175 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~ 175 (844)
.++..++++.|+.+| ++|.|+.+||..++. +......+..+|..++ .|+||.|+|+||+.++..... ..++.
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~D----~d~~g~i~~~Ef~~~~~~~~~-~~~~~ 109 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALD----INDRGNITYTEFMAGCYRWKN-IESTF 109 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHC----TTCCSEECHHHHHHHHSCCTT-C--CH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHhccc-CCHHH
Confidence 356777888888877 899999999999872 2223456778888665 578999999999998875543 33578
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCC--------CceeHHHHHHHHHc
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCK--------GYIEMWQLEILLRG 246 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~d--------G~It~~EF~~ll~~ 246 (844)
++.+|+.||+|+||+||.+||++++. ...+ .++.++.+|+.+|.|+| |.|+|+||..+|..
T Consensus 110 ~~~~F~~~D~d~~G~I~~~El~~~l~----~~~~------~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 110 LKAAFNKIDKDEDGYISKSDIVSLVH----DKVL------DNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHTT----TSSC------CHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHc----CCCC------CHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 99999999999999999999999985 1222 36678899999999999 99999999999864
No 84
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.62 E-value=1.5e-15 Score=151.86 Aligned_cols=137 Identities=16% Similarity=0.185 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHh-----hcc---CCCCCHH-----HHHHHHHHHhcccCCCCCCceeHHHHHHH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFG-----ICV---GMGESTE-----FSVGVFEALARRRKVNTENGITKEEVRMF 163 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~-----~~l---g~~~~~~-----~~~~lf~~l~~~~~~d~dG~I~f~EF~~~ 163 (844)
.++.+++++.|+.+| ++|.|+.+||. .++ |...+.. .+..+|+.++ .|++|.|+|+||+.+
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D----~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 12 PRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG----MKYGVETDWPAYIEG 87 (191)
T ss_dssp HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT----CCTTCEEEHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhC----cCCCCcCcHHHHHHH
Confidence 456777888888877 89999999998 565 4433332 3555666443 688999999999999
Q ss_pred HHHhcc-------CChHHHHH----HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCC
Q 042007 164 WEDMTK-------KDLDARLQ----IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCK 232 (844)
Q Consensus 164 l~~~~~-------~~~~~~l~----~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~d 232 (844)
+..... ...++.++ .+|+.||+|+||+|+.+||+.++.... ..+ .++.++.+|+.+|.|+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~------~~~~~~~~~~~~D~d~d 159 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAG--IIQ------SSEDCEETFRVCDIDES 159 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT--SCC------SHHHHHHHHHHSCCCTT
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC--CCC------CHHHHHHHHHHhCCCCC
Confidence 876432 12223344 999999999999999999999996532 122 35678999999999999
Q ss_pred CceeHHHHHHHHHcC
Q 042007 233 GYIEMWQLEILLRGM 247 (844)
Q Consensus 233 G~It~~EF~~ll~~~ 247 (844)
|.|+|+||..+|.+.
T Consensus 160 G~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 160 GQLDVDEMTRQHLGF 174 (191)
T ss_dssp SCEEHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHH
Confidence 999999999999864
No 85
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.62 E-value=1.4e-15 Score=152.55 Aligned_cols=137 Identities=15% Similarity=0.192 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHh-----hcc---CCCCCHH-----HHHHHHHHHhcccCCCCCCceeHHHHHHH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFG-----ICV---GMGESTE-----FSVGVFEALARRRKVNTENGITKEEVRMF 163 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~-----~~l---g~~~~~~-----~~~~lf~~l~~~~~~d~dG~I~f~EF~~~ 163 (844)
.++.+++++.|+.+| ++|.|+.+||. .++ |...+.. .+..+|+.++ .|++|.|+|+||+.+
T Consensus 16 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D----~d~~g~i~~~EF~~~ 91 (195)
T 1qv0_A 16 PRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG----MEYGKEIAFPQFLDG 91 (195)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTT----CCTTCCBCHHHHHHH
T ss_pred HHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcC----CCCCceEcHHHHHHH
Confidence 466777888888877 89999999998 454 4443322 3555666444 678999999999998
Q ss_pred HHHhcc-------CChHHHHH----HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCC
Q 042007 164 WEDMTK-------KDLDARLQ----IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCK 232 (844)
Q Consensus 164 l~~~~~-------~~~~~~l~----~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~d 232 (844)
+..... ....+.++ .+|+.||+|+||+|+.+||++++.... ..+ .++.++.+|+.+|.|+|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~------~~~~~~~~~~~~D~d~d 163 (195)
T 1qv0_A 92 WKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISG--ISP------SQEDCEATFRHCDLDNA 163 (195)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHS--SCC------CHHHHHHHHHHSCCCTT
T ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC--CCC------CHHHHHHHHHHhCCCCC
Confidence 865432 11222344 999999999999999999999996542 122 35678899999999999
Q ss_pred CceeHHHHHHHHHcC
Q 042007 233 GYIEMWQLEILLRGM 247 (844)
Q Consensus 233 G~It~~EF~~ll~~~ 247 (844)
|.|+|+||..++.+.
T Consensus 164 g~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 164 GDLDVDEMTRQHLGF 178 (195)
T ss_dssp SCEEHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHH
Confidence 999999999999865
No 86
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.62 E-value=2.3e-15 Score=143.22 Aligned_cols=132 Identities=14% Similarity=0.208 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHcccCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh--ccCChHH
Q 042007 100 DAWRSIERRFQQFAVSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM--TKKDLDA 174 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~--~~~~~~~ 174 (844)
+++.++++.|+. +++|.|+.+||..++ |...+...+..+++. |++|.|+|+||+.++... ......+
T Consensus 5 ~el~~~F~~~D~-d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~-------~~~g~i~~~eF~~~~~~~~~~~~~~~~ 76 (145)
T 2bl0_B 5 DQIQECFQIFDK-DNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ-------LNAKEFDLATFKTVYRKPIKTPTEQSK 76 (145)
T ss_dssp HHHHHHHHHHCT-TCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH-------HTSSEECHHHHHHHHTSCCCCGGGGHH
T ss_pred HHHHHHHHHhCC-CCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh-------cCCCeEcHHHHHHHHHHHhhcCcccHH
Confidence 345555555543 489999999999887 555566666666663 459999999999998765 3445678
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++.+|+.||+|++|+|+.+||+.++.... .. ..++.++.+|+.+|.|+||.|+|+||..+|...
T Consensus 77 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 77 EMLDAFRALDKEGNGTIQEAELRQLLLNLG--DA------LTSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp HHHHHHHHHCSSSSSEEEHHHHHHHHHHSS--SC------CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHcC--CC------CCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhc
Confidence 999999999999999999999999996532 11 236778899999999999999999999999754
No 87
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.62 E-value=9.8e-16 Score=149.60 Aligned_cols=135 Identities=17% Similarity=0.250 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLD 173 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~ 173 (844)
.++..++++.|+.+| ++|.|+.+||..++ |...+...+..+|+.++ .|++|.|+++||+.++........+
T Consensus 23 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~i~~~ef~~~~~~~~~~~~~ 98 (166)
T 2aao_A 23 EEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAAD----VDNSGTIDYKEFIAATLHLNKIERE 98 (166)
T ss_dssp HHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHC----TTCCSSBCHHHHHHHHTTCHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHHhhcccH
Confidence 456777888888877 89999999998877 55556677888888665 5779999999999998655433456
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.++.+|+.+|.|++|+|+.+||++++... +++ ++.++.+|+.+|.|+||.|+|+||..++...
T Consensus 99 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~----~~~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 162 (166)
T 2aao_A 99 DHLFAAFTYFDKDGSGYITPDELQQACEEF----GVE------DVRIEELMRDVDQDNDGRIDYNEFVAMMQKG 162 (166)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTCC------------------CCHHHHHCTTCSSSBCHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHc----CCC------HHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 789999999999999999999999998532 121 4557789999999999999999999999754
No 88
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.61 E-value=2.7e-15 Score=173.69 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=105.9
Q ss_pred CCcEEEEEcCCCCCCCccCcccccCCC--CCceEEEEEec-------------CCchHHHHHHHHhhcCCCCCCCCCCCc
Q 042007 559 SGMYLFVKCPDLSPFEWHPFSITSAPG--DYYLSVHIRTL-------------GDWTTELKQRFEKVCEAPAPAKPNRGN 623 (844)
Q Consensus 559 pGQyv~l~~p~~s~~e~HPFTI~s~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~~~ 623 (844)
|+||+...+|. .+.|||||+|+|. ++.+.|+||.. |..|..|.+++.+........++|...
T Consensus 278 p~~~ll~~lp~---l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~Gd~~ 354 (539)
T 2qtl_A 278 PLSLLLEHLPK---LQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354 (539)
T ss_dssp CHHHHHHHSCB---CCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC------------
T ss_pred CHHHHHHhCcC---CcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCCCCcc
Confidence 45666666665 4899999999995 68899999987 778999988742110000000122100
Q ss_pred chhhhhhhhhccccccccccCcCEEEEeCccC-CCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcC
Q 042007 624 LMRMETKSAANNANFEQIQASFPKILIKGPYG-APAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLEN 702 (844)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG-~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~ 702 (844)
.....+|.|.||+| .+..+......+||||||+|||||+|++++.....+.+..
T Consensus 355 ------------------~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~------- 409 (539)
T 2qtl_A 355 ------------------KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPD------- 409 (539)
T ss_dssp --------------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTT-------
T ss_pred ------------------ccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhcccc-------
Confidence 00123899999997 5543333457899999999999999999997554322100
Q ss_pred CCCCCCcEEEEEEEeCCC-ChhhhHHHHHHHHhccCCCCeEEEEEEEecc
Q 042007 703 GFKKGPERAYFYWVTREQ-GSFEWFKGVMDDIADHDDKNVIEMHNYLTSV 751 (844)
Q Consensus 703 ~~~~~~~~v~l~W~~R~~-~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~ 751 (844)
....++.|+|++|+. +++ .|.++|.++.+.. ..+++++.+++.
T Consensus 410 ---~~~~~v~LffG~R~~~~D~-ly~dEL~~~~~~g--~~~~l~~afSRd 453 (539)
T 2qtl_A 410 ---GNFGAMWLFFGCRHKDRDY-LFRKELRHFLKHG--ILTHLKVSFSRD 453 (539)
T ss_dssp ---CCCCCEEEEEEESCTTTCC-TTHHHHHHHHHTT--SSCEEEEEESSS
T ss_pred ---CCCCCEEEEEEECCcchhh-HHHHHHHHHHHhC--CCcEEEEEEccC
Confidence 124679999999999 566 7889998887642 345777777764
No 89
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.60 E-value=1.8e-15 Score=154.14 Aligned_cols=134 Identities=21% Similarity=0.280 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CC--CCCHHHHHHHH-------HHHhcccCCCCCCceeHHHHHHHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GM--GESTEFSVGVF-------EALARRRKVNTENGITKEEVRMFWE 165 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~--~~~~~~~~~lf-------~~l~~~~~~d~dG~I~f~EF~~~l~ 165 (844)
+++.++++.|+.+| +||.|+.+||..++ |. ..+...+.+++ +.++ .|+||.|+|+||+.++.
T Consensus 33 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D----~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 33 KMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKG----VEPVNGLLREDWVEANR 108 (208)
T ss_dssp ---CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT----CBTTTBEEGGGHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhC----CCCCCeEcHHHHHHHHH
Confidence 34666777777777 89999999999887 33 44566677777 5443 57899999999999986
Q ss_pred ---------Hhc-cCCh-HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCc
Q 042007 166 ---------DMT-KKDL-DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGY 234 (844)
Q Consensus 166 ---------~~~-~~~~-~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~ 234 (844)
.+. .... ++.++.+|+.||+|+||+||.+||+.++.... ++ ++.++.+|+.+|.|+||.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g----~~------~~~~~~~~~~~D~d~dG~ 178 (208)
T 2hpk_A 109 VFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD----VP------QEAAYTFFEKADTDKSGK 178 (208)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT----SC------TTHHHHHHHHHCTTCCSS
T ss_pred HHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC----cC------HHHHHHHHHHhCCCCCCc
Confidence 332 2233 34489999999999999999999999996533 22 345788999999999999
Q ss_pred eeHHHHHHHHHcC
Q 042007 235 IEMWQLEILLRGM 247 (844)
Q Consensus 235 It~~EF~~ll~~~ 247 (844)
|+|+||..+|...
T Consensus 179 I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 179 LERTELVHLFRKF 191 (208)
T ss_dssp BCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999999999754
No 90
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.60 E-value=2.2e-15 Score=152.32 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCChH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDLD 173 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~~ 173 (844)
+++.++.+.|+.+| +||.|+.+||..+| |...+...+..++. ..+|.|+|+||+.++... ......
T Consensus 54 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~--------~~~g~i~~~eF~~~~~~~~~~~~~~ 125 (196)
T 3dtp_E 54 HQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA--------EAPGPINFTMFLTIFGDRIAGTDEE 125 (196)
T ss_dssp TTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHT--------TSSSCCBHHHHHHHHHHCCCSSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH--------HccCCCcHHHHHHHHHHHhcCCCcH
Confidence 34556666666666 89999999999887 55555444444433 127999999999999764 345678
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
+.++.+|+.||.|+||+|+.+||+.++ ... ..+ .++.++.+|+.+|.|+||.|+|+||..+|...+.
T Consensus 126 ~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g--~~~------~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~~ 192 (196)
T 3dtp_E 126 DVIVNAFNLFDEGDGKCKEETLKRSLT-TWG--EKF------SQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAK 192 (196)
T ss_dssp HHHHHHHHTTCSSSSCCBHHHHHHHHH-HSS--SCC------CHHHHHHHHHSSCEETTEECHHHHHHHHHSSCCB
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcC--CCC------CHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCCc
Confidence 899999999999999999999999999 532 222 3667889999999999999999999999987764
No 91
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.60 E-value=1.7e-15 Score=145.97 Aligned_cols=134 Identities=10% Similarity=0.135 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~ 172 (844)
.++++++++.|+.+| ++|.|+.+||..++ |...+...+..++..+ +|.|+|+||+.++... .....
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--------~g~i~~~eF~~~~~~~~~~~~~ 83 (153)
T 2ovk_B 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC--------PGQLNFTAFLTLFGEKVSGTDP 83 (153)
T ss_dssp HHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS--------SSCCCSHHHHHTTTTTTTTCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc--------CCCCCHHHHHHHHHHHhccCCh
Confidence 456777888888777 89999999999887 4455555555555521 7899999999998754 34456
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
++.++.+|+.||+|+||+|+.+||++++.... .. ..++.++.+|+.+|. +||.|+|+||..+|...|.
T Consensus 84 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~------~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~~~~ 151 (153)
T 2ovk_B 84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMG--DN------FSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGKAED 151 (153)
T ss_dssp TTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSS--SC------CCHHHHHHHHHHCCE-ETTEECHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CC------CCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhcCcc
Confidence 78999999999999999999999999997532 12 236678899999999 9999999999999987764
No 92
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.60 E-value=2.8e-15 Score=173.06 Aligned_cols=135 Identities=16% Similarity=0.216 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc-------CCCCC-------HHHHHHHHHHHhcccCCCCCCceeHHHHHH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV-------GMGES-------TEFSVGVFEALARRRKVNTENGITKEEVRM 162 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l-------g~~~~-------~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~ 162 (844)
.++.+++++.|+.+| +||.|+.+||..++ |...+ ...+.++|+.++ .|+||.|+|+||+.
T Consensus 331 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D----~d~~g~i~~~Ef~~ 406 (484)
T 3nyv_A 331 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVD----FDKNGYIEYSEFVT 406 (484)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHT----CCTTSEEEHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhC----CCCCCeEeHHHHHH
Confidence 456777888888887 89999999995443 33333 456777787665 68899999999999
Q ss_pred HHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHH
Q 042007 163 FWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEI 242 (844)
Q Consensus 163 ~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ 242 (844)
++........+++++.+|+.||+|+||+||.+||++++.. .. ..++.++.+|+++|.|+||.|+|+||.+
T Consensus 407 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~----~~------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~ 476 (484)
T 3nyv_A 407 VAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV----SD------VDSETWKSVLSEVDKNNDGEVDFDEFQQ 476 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH----TT------CCHHHHHHHHHHHCTTCCSEEEHHHHHH
T ss_pred HHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh----cC------CCHHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 9887765567789999999999999999999999999854 11 2366789999999999999999999999
Q ss_pred HHHcC
Q 042007 243 LLRGM 247 (844)
Q Consensus 243 ll~~~ 247 (844)
+|.+.
T Consensus 477 ~~~~~ 481 (484)
T 3nyv_A 477 MLLKL 481 (484)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99865
No 93
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.59 E-value=2e-15 Score=175.18 Aligned_cols=137 Identities=14% Similarity=0.180 Sum_probs=113.4
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc-----------CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHH
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV-----------GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFW 164 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l-----------g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l 164 (844)
..++.+++++.|+.+| +||.|+.+||..++ |.......++++|+.+| .|+||.|+|+||+.++
T Consensus 350 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D----~d~dG~I~~~EF~~~~ 425 (504)
T 3q5i_A 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD----FDKNGYIEYSEFISVC 425 (504)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHC----TTCSSSEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhC----CCCCCcEeHHHHHHHH
Confidence 4567788888888888 89999999998776 22344567888888665 5789999999999998
Q ss_pred HHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 165 EDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 165 ~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
........++.++.+|+.||+|+||+||.+||++++.. .. ..++.++.+|+++|.|+||.|+|+||..+|
T Consensus 426 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~----~~------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 495 (504)
T 3q5i_A 426 MDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL----TS------ISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495 (504)
T ss_dssp SCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC----SC------CCHHHHHHHHHTTCSSCSSSEEHHHHHHHH
T ss_pred HhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh----CC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 76555566889999999999999999999999998843 11 236678999999999999999999999999
Q ss_pred HcCC
Q 042007 245 RGMV 248 (844)
Q Consensus 245 ~~~~ 248 (844)
.+..
T Consensus 496 ~~~~ 499 (504)
T 3q5i_A 496 HKIC 499 (504)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8654
No 94
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.59 E-value=3.9e-16 Score=149.92 Aligned_cols=133 Identities=16% Similarity=0.231 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCC--CCCceeHHHHHHHHHHhccC--
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVN--TENGITKEEVRMFWEDMTKK-- 170 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d--~dG~I~f~EF~~~l~~~~~~-- 170 (844)
++++++++.|+.+| ++|.|+.+||..++ |...+...+.++|..++ .| ++|.|+|+||+.++......
T Consensus 7 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d----~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPK----SDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp ----CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCC----HHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----cCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 45566666776666 89999999998887 66666666666666333 45 79999999999999876532
Q ss_pred -ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 171 -DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 171 -~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
...+.++.+|+.||+|++|+|+.+||++++.... ..+ .++.++.+|+.+| |+||.|+|+||..+|.
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~------~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLG--EKM------TEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSS--SCC------CHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCC------CHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 3456789999999999999999999999996542 122 3667899999999 9999999999999875
No 95
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.59 E-value=7e-15 Score=147.89 Aligned_cols=128 Identities=20% Similarity=0.188 Sum_probs=104.1
Q ss_pred HHHHHHHHHHcccCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHH
Q 042007 101 AWRSIERRFQQFAVSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQ 177 (844)
Q Consensus 101 ~~~~l~~~F~~ld~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~ 177 (844)
++.++++.|+. ++||.|+.+||..++ +...+...+..+|+.++ .|+||.|+|+||+.++... +.++
T Consensus 28 ~l~~~F~~~D~-d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D----~d~dG~I~~~EF~~~~~~~------~~~~ 96 (191)
T 1y1x_A 28 ELMEWFRAVDT-DGSGAISVPELNAALSSAGVPFSLATTEKLLHMYD----KNHSGEITFDEFKDLHHFI------LSMR 96 (191)
T ss_dssp CHHHHHHHHCT-TCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHC----TTCSSSBCHHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHcC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHH------HHHH
Confidence 45555555554 489999999999988 33456677888888665 5779999999999998753 6899
Q ss_pred HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 178 IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 178 ~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+|+.||+|++|+|+.+||++++..... ...++.++.+|+.+|.|+||.|+|+||..++...
T Consensus 97 ~~F~~~D~d~~G~i~~~e~~~~l~~~g~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 158 (191)
T 1y1x_A 97 EGFRKRDSSGDGRLDSNEVRAALLSSGY--------QVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158 (191)
T ss_dssp HHHHHHCTTSSSCBCHHHHHHHHHTTSC--------CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEcHHHHHHHHHHhCC--------CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 9999999999999999999999965321 2236778899999999999999999999998743
No 96
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.59 E-value=1.1e-14 Score=143.39 Aligned_cols=128 Identities=13% Similarity=0.222 Sum_probs=102.9
Q ss_pred HHHHHHHHHHcccCCCCcCHHHHhhcc---C-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHH
Q 042007 101 AWRSIERRFQQFAVSGRLPKDKFGICV---G-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARL 176 (844)
Q Consensus 101 ~~~~l~~~F~~ld~dG~is~~eF~~~l---g-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l 176 (844)
++.++++.|+. +++|.|+.+||..++ | ...+...+..+|..++ .|++|.|+++||..++... +.+
T Consensus 8 ~l~~~F~~~D~-d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~ef~~~~~~~------~~~ 76 (172)
T 2znd_A 8 FLWNVFQRVDK-DRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD----RENKAGVNFSEFTGVWKYI------TDW 76 (172)
T ss_dssp HHHHHHHHHCT-TCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHC----SSSSSEECHHHHHHHHHHH------HHH
T ss_pred HHHHHHHHhCC-CCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHH------HHH
Confidence 44444444443 489999999999988 3 3456677888888665 5779999999999988653 679
Q ss_pred HHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 177 QIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 177 ~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.+|+.||+|++|+|+.+|++.++..... . ..++.++.+|+.+|.|+||.|+|+||..++...
T Consensus 77 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 77 QNVFRTYDRDNSGMIDKNELKQALSGFGY--R------LSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHTTC--C------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHcCC--C------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999999965421 1 235678899999999999999999999988643
No 97
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.59 E-value=1.9e-15 Score=156.45 Aligned_cols=139 Identities=17% Similarity=0.160 Sum_probs=105.0
Q ss_pred CchHHHHHHHHHHHccc--CCCCcCHHHHhhcc----CCCCCH----HHHHHHHHHH-----hcccCCCCCCceeHHHHH
Q 042007 97 KENDAWRSIERRFQQFA--VSGRLPKDKFGICV----GMGEST----EFSVGVFEAL-----ARRRKVNTENGITKEEVR 161 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l----g~~~~~----~~~~~lf~~l-----~~~~~~d~dG~I~f~EF~ 161 (844)
...++.+++++.|+.+| +||.|+.+||..++ |..... .....+|+.+ + .|++|.|+|+||+
T Consensus 45 ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D----~d~~G~I~~~EF~ 120 (226)
T 2lvv_A 45 KDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNK----VKGVGEEDLVEFL 120 (226)
T ss_dssp CCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHH----HSCCCCCSCBCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCC----CCCCCcCCHHHHH
Confidence 34567788888888887 89999999999843 443222 2334444433 3 4779999999999
Q ss_pred HHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-cccccccccchHHHHHHHHHHhCCCCCCceeHHHH
Q 042007 162 MFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQL 240 (844)
Q Consensus 162 ~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF 240 (844)
.++........++.++.+|+.||+|+||+||.+||++++..... ....+ .+..+|+.+|.|+||.|+|+||
T Consensus 121 ~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~--------e~~~~~~~~D~d~dG~Is~~EF 192 (226)
T 2lvv_A 121 EFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT--------DATTVFNEIDTNGSGVVTFDEF 192 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC--------SCHHHHHHHCCSCSSCEEHHHH
T ss_pred HHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH--------HHHHHHHHhCCCCCCcEeHHHH
Confidence 97554443345679999999999999999999999999975421 11111 1678999999999999999999
Q ss_pred HHHHHcC
Q 042007 241 EILLRGM 247 (844)
Q Consensus 241 ~~ll~~~ 247 (844)
..+|...
T Consensus 193 ~~~~~~~ 199 (226)
T 2lvv_A 193 SCWAVTK 199 (226)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999754
No 98
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.59 E-value=1.9e-15 Score=174.92 Aligned_cols=137 Identities=15% Similarity=0.196 Sum_probs=111.4
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhccC---C--------CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHH
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICVG---M--------GESTEFSVGVFEALARRRKVNTENGITKEEVRMFW 164 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~lg---~--------~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l 164 (844)
..++.+++++.|+.+| +||.|+.+||..++. . ......++++|+.++ .|+||.|+|+||+.++
T Consensus 341 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D----~d~~G~I~~~EF~~~~ 416 (494)
T 3lij_A 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD----FDRNGYIDYSEFVTVA 416 (494)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHC----TTCSSSEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhC----CCCCCcCcHHHHHHHH
Confidence 4567788888888887 899999999998872 1 222456777777655 5789999999999998
Q ss_pred HHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 165 EDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 165 ~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
........+++++.+|+.||+|+||+||.+||++++.. ..+ .++.++.+|+++|.|+||.|+|+||..+|
T Consensus 417 ~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~----~~~------~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 486 (494)
T 3lij_A 417 MDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL----DHL------ESKTWKEMISGIDSNNDGDVDFEEFCKMI 486 (494)
T ss_dssp SCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C----CSC------CCHHHHHHHHTTCSSSSSSEEHHHHHHHH
T ss_pred HhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh----cCC------CHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 66555567889999999999999999999999998853 122 34668899999999999999999999999
Q ss_pred HcCC
Q 042007 245 RGMV 248 (844)
Q Consensus 245 ~~~~ 248 (844)
.+..
T Consensus 487 ~~~~ 490 (494)
T 3lij_A 487 QKLC 490 (494)
T ss_dssp HHHS
T ss_pred Hhhc
Confidence 8764
No 99
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.58 E-value=3.3e-15 Score=148.16 Aligned_cols=134 Identities=16% Similarity=0.187 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHcc-c--CCCCcCHHHHhhcc---C----CCCCHHHHHHH-----------HHHHhcccCCCCCCceeHH
Q 042007 100 DAWRSIERRFQQF-A--VSGRLPKDKFGICV---G----MGESTEFSVGV-----------FEALARRRKVNTENGITKE 158 (844)
Q Consensus 100 ~~~~~l~~~F~~l-d--~dG~is~~eF~~~l---g----~~~~~~~~~~l-----------f~~l~~~~~~d~dG~I~f~ 158 (844)
++.+++++.|+.+ | +||.|+.+||..++ + ...+.....++ |+.++ .|+||.|+++
T Consensus 5 ~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D----~d~dG~I~~~ 80 (185)
T 2sas_A 5 FQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRAD----INKDDVVSWE 80 (185)
T ss_dssp HHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHC----TTCSSCEEHH
T ss_pred HHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcC----CCCCCeEcHH
Confidence 4566677777777 6 89999999998776 3 44444545544 66444 6789999999
Q ss_pred HHHHHHHHhcc---------CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC
Q 042007 159 EVRMFWEDMTK---------KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP 229 (844)
Q Consensus 159 EF~~~l~~~~~---------~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~ 229 (844)
||+.++..... ...++.++.+|+.+|+|+||+||.+||++++.... ++ ++.+..+|+.+|.
T Consensus 81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g----~~------~~~~~~~~~~~D~ 150 (185)
T 2sas_A 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ----LQ------CADVPAVYNVITD 150 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC----CC------CSSHHHHHHHHHT
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC----CC------HHHHHHHHHHhcC
Confidence 99999976532 23568899999999999999999999999985321 22 3347789999999
Q ss_pred CCCCceeHHHHHHHHHcC
Q 042007 230 DCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 230 d~dG~It~~EF~~ll~~~ 247 (844)
|+||+|+++||..+|.+.
T Consensus 151 d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 151 GGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp TTTSCCSHHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHHH
Confidence 999999999999999865
No 100
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.57 E-value=2.3e-15 Score=140.67 Aligned_cols=124 Identities=19% Similarity=0.314 Sum_probs=97.1
Q ss_pred HHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHH
Q 042007 105 IERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARL 176 (844)
Q Consensus 105 l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l 176 (844)
+++.|..+| ++|.|+.+||..++ +...+...+..+|+.++ .|++|.|+++||..++..+ .....++.+
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D----~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 77 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSID----ADGNGEIDQNEFAKFYGSIQGQDLSDDKIGL 77 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHC----SSCCSEEEHHHHHHHTTCSSCCSSHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHc----CCCCCeEcHHHHHHHHHHhcccccCCCHHHH
Confidence 344555555 89999999999887 34444556778888655 5779999999999988522 122345679
Q ss_pred HHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 177 QIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 177 ~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
+.+|+.+|.|++|+|+.+||+.++..... . .+..+|+.+|.|+||.|+++||..+|
T Consensus 78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~----~--------~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGI----E--------KVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHCCSSSSEEEHHHHHHHHTTTTC----H--------HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHhCH----H--------HHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 99999999999999999999999953211 0 17789999999999999999999886
No 101
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.57 E-value=1.1e-14 Score=143.21 Aligned_cols=136 Identities=16% Similarity=0.243 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---C----CCCCHHH-HHHH----HHHHhcccCCCCCCceeHHHHHHHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---G----MGESTEF-SVGV----FEALARRRKVNTENGITKEEVRMFWE 165 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g----~~~~~~~-~~~l----f~~l~~~~~~d~dG~I~f~EF~~~l~ 165 (844)
++..++++.|+.+| +||.|+.+||..++ + ...+... +.++ ++.+.+.- |++|.|+|+||+.++.
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~--D~~g~i~~~EF~~~~~ 80 (174)
T 1q80_A 3 LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAV--AGGKGIDETTFINSMK 80 (174)
T ss_dssp HHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGT--TTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhc--CCCCeEcHHHHHHHHH
Confidence 45677777777777 89999999999886 3 5544433 3221 12233222 2699999999999998
Q ss_pred HhccC-----ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHH
Q 042007 166 DMTKK-----DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQL 240 (844)
Q Consensus 166 ~~~~~-----~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF 240 (844)
..... ..++.++.+|+.||+|+||+|+.+||++++.... ++ ++.++.+|+.+|.|+||.|+|+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g----~~------~~~~~~~~~~~D~d~dg~i~~~ef 150 (174)
T 1q80_A 81 EMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG----LD------KTMAPASFDAIDTNNDGLLSLEEF 150 (174)
T ss_dssp HHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT----CC------GGGHHHHHHHHCTTCSSSBCHHHH
T ss_pred HHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC----CC------HHHHHHHHHHhCCCCCceEeHHHH
Confidence 76542 2357899999999999999999999999997541 22 345788999999999999999999
Q ss_pred HHHHHcC
Q 042007 241 EILLRGM 247 (844)
Q Consensus 241 ~~ll~~~ 247 (844)
..+|.+.
T Consensus 151 ~~~~~~~ 157 (174)
T 1q80_A 151 VIAGSDF 157 (174)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999654
No 102
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.57 E-value=5.1e-15 Score=140.30 Aligned_cols=125 Identities=16% Similarity=0.218 Sum_probs=98.1
Q ss_pred HHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccC---ChHHHH
Q 042007 105 IERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKK---DLDARL 176 (844)
Q Consensus 105 l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~---~~~~~l 176 (844)
+++.|+.+| ++|.|+.+||..++ |...+...+.++++ |++|.|+|+||+.++...... ...+.+
T Consensus 7 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~--------~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 78 (140)
T 1ggw_A 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES--------TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF 78 (140)
T ss_dssp THHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT--------TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh--------CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence 445555555 89999999999887 55555444444433 559999999999998765432 345899
Q ss_pred HHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 177 QIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 177 ~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.+|+.||+|++|+|+.+||++++..... .+ .++.++.+|+.+|. +||.|+|+||..+|..
T Consensus 79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~~------~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 79 VKGFQVFDKDATGMIGVGELRYVLTSLGE--KL------SNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHTTCSSCSSCCCHHHHHHHHHHHHS--CS------CHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHHcCC--CC------CHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 99999999999999999999999975431 22 35678899999999 9999999999999864
No 103
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.57 E-value=2.1e-15 Score=179.95 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=129.5
Q ss_pred ccCCCcEEEEEcCCCCCCCccCcccccCCCC--CceEEEEEe--------------cCCchHHHHHHHHhhcC-CCCCCC
Q 042007 556 KYQSGMYLFVKCPDLSPFEWHPFSITSAPGD--YYLSVHIRT--------------LGDWTTELKQRFEKVCE-APAPAK 618 (844)
Q Consensus 556 ~~~pGQyv~l~~p~~s~~e~HPFTI~s~p~~--~~l~l~Ir~--------------~G~~T~~L~~~~~~~~~-~~~~~~ 618 (844)
.--|+||+...+|.+ ++|||||+|+|.. +.+.|+|++ .|..|..|.++-..... ...+.+
T Consensus 413 ~~~p~~~l~~~lp~l---~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~ 489 (682)
T 2bpo_A 413 DTVPMQFLVESVPQM---TPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETN 489 (682)
T ss_dssp TTSCHHHHHHHSCBC---CCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSC
T ss_pred cCCCHHHHHHhCccc---ccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccccccccccccc
Confidence 346899988888764 8999999999964 778888764 37789999884221000 000000
Q ss_pred CCCCcchhhhhhhhhccccccccccCcCEEEEeCccCCCC--------------CCCCCCCeEEEEEcccchhchHHHHH
Q 042007 619 PNRGNLMRMETKSAANNANFEQIQASFPKILIKGPYGAPA--------------QDYKNYDILLLIGLGIGATPFISIIK 684 (844)
Q Consensus 619 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~--------------~~~~~~~~vvlVagGiGITp~lsil~ 684 (844)
.| ..+.|.||+|.+. .+-.....+||||||+|||||+|+++
T Consensus 490 ~G-------------------------~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq 544 (682)
T 2bpo_A 490 LP-------------------------VHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIR 544 (682)
T ss_dssp CC-------------------------CCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHH
T ss_pred cc-------------------------cceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHH
Confidence 12 5788999999861 11123468999999999999999999
Q ss_pred HHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHH
Q 042007 685 DLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAM 764 (844)
Q Consensus 685 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~ 764 (844)
++......... ........++.|+|++|+.+++ .|+++|++++... +..+++++.+++....... .
T Consensus 545 ~r~~~~~~~~~------~~~g~~~~~~~L~fG~R~~~D~-ly~dEl~~~~~~~-g~~~~l~~afSr~d~~~k~--y---- 610 (682)
T 2bpo_A 545 ERVAFLESQKK------GGNNVSLGKHILFYGSRNTDDF-LYQDEWPEYAKKL-DGSFEMVVAHSRLPNTKKV--Y---- 610 (682)
T ss_dssp HHHHHHHTCC----------CCCCCCEEEEEEESSSSSC-TTTTTHHHHHHHH-GGGEEEEEEESCCTTSCCC--C----
T ss_pred HHHHhhccccc------ccccCCcCCEEEEEecCChhhh-hhHHHHHHHHHhc-CCceEEEEEECCCCCCCCc--c----
Confidence 98765430000 0000124689999999999887 7888888884321 2356777777763211000 0
Q ss_pred HHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCcEEEEEeCC-hhHHHHHHHHHHhh
Q 042007 765 VQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSRIGVFYCGS-ATLTKTLKELCLEF 829 (844)
Q Consensus 765 ~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP-~~m~~~vr~~~~~~ 829 (844)
.|.. + +-+.+++. ++.. . ...||+||| ++|+++|++++.+.
T Consensus 611 Vqd~---------l----------~e~~~~l~-~~l~--~--~~~vYvCGpa~~M~~~V~~~L~~i 652 (682)
T 2bpo_A 611 VQDK---------L----------KDYEDQVF-EMIN--N--GAFIYVCGDAKGMAKGVSTALVGI 652 (682)
T ss_dssp HHHH---------H----------HHTHHHHH-HHHT--T--TCEEEEEECSTTHHHHHHHHHHHH
T ss_pred hHHH---------H----------HhhHHHHH-HHHh--C--CcEEEEeCCchHhHHHHHHHHHHH
Confidence 0000 0 00011111 1121 1 347999999 79999999988774
No 104
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.56 E-value=1.5e-14 Score=162.62 Aligned_cols=135 Identities=16% Similarity=0.289 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCCh
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDL 172 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~ 172 (844)
.++.+++++.|+.+| +||.|+.+||..++ +...+...+.++|+.++ .|+||.|+|+||+.++.... ....
T Consensus 308 ~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D----~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD----ADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTC----TTSSSSEEHHHHHHHHHC------C
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc----cCCCCcccHHHHHHHHHhhccccch
Confidence 456677888888877 89999999999887 55556677788887554 57799999999999997643 4456
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+++++.+|+.||+|+||+|+.+||++++..... .+ .++.++.+|+.+|.|+||.|+|+||..+|.
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~--~l------s~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE--KL------TDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC--CC------CHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCC--CC------CHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 789999999999999999999999999975431 22 367789999999999999999999999985
No 105
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.55 E-value=1.7e-14 Score=142.37 Aligned_cols=126 Identities=15% Similarity=0.247 Sum_probs=102.1
Q ss_pred HHHHHHHHHccc-CCCCcCHHHHhhcc----C-------CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc
Q 042007 102 WRSIERRFQQFA-VSGRLPKDKFGICV----G-------MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK 169 (844)
Q Consensus 102 ~~~l~~~F~~ld-~dG~is~~eF~~~l----g-------~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~ 169 (844)
.+++++.|+.+| ++|.|+.+||..++ | ...+...+..+++.++ .|++|.|+|+||+.++...
T Consensus 3 ~~~l~~~F~~~Dd~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~eF~~~~~~~-- 76 (173)
T 1alv_A 3 VRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD----SDTTGKLGFEEFKYLWNNI-- 76 (173)
T ss_dssp HHHHHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHC----TTCSSSBCHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHhCCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHc----CCCCCccCHHHHHHHHHHH--
Confidence 444555555555 89999999998887 3 4445677888888665 5789999999999998753
Q ss_pred CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 170 KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 170 ~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.++.+|+.||+|++|+|+.+||+.++..... .+ .++.++.+|+.+| |++|.|+|+||..++..
T Consensus 77 ----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~~------~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 77 ----KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGF--HL------NEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ----HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTC--CC------CHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCC--CC------CHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 68999999999999999999999999975421 22 3567889999999 99999999999998864
No 106
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.55 E-value=3.6e-15 Score=153.56 Aligned_cols=141 Identities=16% Similarity=0.162 Sum_probs=105.0
Q ss_pred CchHHHHHHHHHHHccc--CCCCcCHHHHhhcc----CCCCCHHHH----HHHHHH----HhcccCCCCCCceeHHHHHH
Q 042007 97 KENDAWRSIERRFQQFA--VSGRLPKDKFGICV----GMGESTEFS----VGVFEA----LARRRKVNTENGITKEEVRM 162 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l----g~~~~~~~~----~~lf~~----l~~~~~~d~dG~I~f~EF~~ 162 (844)
...++.+++++.|+.+| ++|.|+.+||..++ |.......+ .++|+. +++ .|++|.|+|+||+.
T Consensus 42 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~g~I~~~EF~~ 118 (219)
T 3cs1_A 42 KTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSK---LENKGSEDFVEFLE 118 (219)
T ss_dssp SSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHH---HHTSCCCSSBCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhc---cCCCCcCCHHHHHH
Confidence 44567888888888887 89999999998765 332222222 233322 222 25699999999999
Q ss_pred HHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHH
Q 042007 163 FWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEI 242 (844)
Q Consensus 163 ~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ 242 (844)
++........+++++.+|+.||+|++|+|+.+||++++..... ..++ ++.++.+|+++|.|+||.|+|+||..
T Consensus 119 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~-~~~~------~~e~~~l~~~~D~d~dG~I~~~EF~~ 191 (219)
T 3cs1_A 119 FRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEA-WGAK------VEDPAALFKELDKNGTGSVTFDEFAA 191 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHH-HTCC------CSCHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcc-cCCC------HHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 8765544445778999999999999999999999999975432 0122 22367899999999999999999999
Q ss_pred HHHcC
Q 042007 243 LLRGM 247 (844)
Q Consensus 243 ll~~~ 247 (844)
+|...
T Consensus 192 ~~~~~ 196 (219)
T 3cs1_A 192 WASAV 196 (219)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99753
No 107
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.55 E-value=9.6e-15 Score=139.79 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=82.7
Q ss_pred EEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhhhHH
Q 042007 648 ILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFEWFK 727 (844)
Q Consensus 648 v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~wf~ 727 (844)
+.|.||||.+.. ....+++|||||||||||++|+++++... ..+++++ ++|+.+++ .|.
T Consensus 3 ~~v~GP~G~~~~-~~~~~~~llIaGG~GiaPl~sm~~~l~~~------------------~~~v~l~-g~R~~~~~-~~~ 61 (142)
T 3lyu_A 3 LNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEI------------------GNDVTTL-HVTFEPMV-ILK 61 (142)
T ss_dssp ----CCCSCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHT------------------TCEEEEE-EEEEGGGC-CSH
T ss_pred eeeeCCCCCCcc-CCCCCeEEEEECcCcHHHHHHHHHHHHhc------------------CCcEEEE-EeCCHHHh-hHH
Confidence 578999999864 34578999999999999999999998753 2479999 99999997 667
Q ss_pred HHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCCCCc
Q 042007 728 GVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHESSR 807 (844)
Q Consensus 728 ~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~~~~ 807 (844)
++|+++++ .+.+..++....+..+..+. | ..||.+ +.+++...... .
T Consensus 62 ~el~~l~~-----~~~~~~~~~~~~~~~~d~~~-------------------g-----~~G~v~--~~l~~~~~~~~--~ 108 (142)
T 3lyu_A 62 EELEKAVT-----RHIVEPVPLNPNQDFLANMK-------------------N-----VSQRLK--EKVRELLESED--W 108 (142)
T ss_dssp HHHHTTSS-----EEEEEEECCCTTSCHHHHHH-------------------H-----HHHHHH--HHHHHHHHSSC--C
T ss_pred HHHHHHHh-----heEEEEeecccccCCCCCCC-------------------C-----Cccchh--HHHHHhcccCC--C
Confidence 77766532 23332212211100011000 0 013332 34444443321 2
Q ss_pred EEEEEeCChhHHHHHHHHHHhhcCC
Q 042007 808 IGVFYCGSATLTKTLKELCLEFSLE 832 (844)
Q Consensus 808 v~V~~CGP~~m~~~vr~~~~~~~~~ 832 (844)
..||+|||++|++.+.+.+++.+.+
T Consensus 109 ~~vy~CGP~~Mm~av~~~l~~~~~~ 133 (142)
T 3lyu_A 109 DLVFMVGPVGDQKQVFEVVKEYGVP 133 (142)
T ss_dssp SEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CEEEEECCHHHHHHHHHHHHHcCCc
Confidence 3699999999999999999987654
No 108
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.55 E-value=1.4e-14 Score=141.39 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=84.3
Q ss_pred CE-EEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeCCCChhh
Q 042007 646 PK-ILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTREQGSFE 724 (844)
Q Consensus 646 ~~-v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R~~~~~~ 724 (844)
.+ +.|.||||.+.. ....++++||||||||||++|+++++... ..+++|+ ++|+.+++
T Consensus 5 d~vl~v~gP~G~~f~-~~~~~~~llIaGG~GItPl~sm~~~l~~~------------------~~~v~l~-g~r~~~d~- 63 (158)
T 3lrx_A 5 DSLLNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEI------------------GNDVTTL-HVTFEPMV- 63 (158)
T ss_dssp -------CCCCCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHH------------------TCEEEEE-EECBGGGC-
T ss_pred CEeeEEECCCCCCCc-cCCCCeEEEEEccCcHHHHHHHHHHHHhc------------------CCcEEEE-EeCCHHHh-
Confidence 57 599999998753 33578999999999999999999998753 2479999 99999997
Q ss_pred hHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHHHHHhhCC
Q 042007 725 WFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFGQLATDHE 804 (844)
Q Consensus 725 wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~~~~~~~~ 804 (844)
.|.++|+++++ .+.+...++......+..+. | ..||.+ +++.+......
T Consensus 64 ~~~~el~~l~~-----~~~~~~v~~~~~~~~~~~~~-------------------g-----~~G~v~--~~l~~~l~~~~ 112 (158)
T 3lrx_A 64 ILKEELEKAVT-----RHIVEPVPLNPNQDFLANMK-------------------N-----VSQRLK--EKVRELLESED 112 (158)
T ss_dssp CSHHHHHHHSS-----EEEECCBCCCTTSCHHHHHH-------------------H-----HHHHHH--HHHHHHHHHSC
T ss_pred hHHHHHHHHHh-----ceEEEEeeccccccCCCCCC-------------------C-----Cccccc--HHHHHhhccCC
Confidence 67788877653 22211001111000010000 0 013322 34444433322
Q ss_pred CCcEEEEEeCChhHHHHHHHHHHhhcCCCCceEEEEecC
Q 042007 805 SSRIGVFYCGSATLTKTLKELCLEFSLESPTRFDFHKEN 843 (844)
Q Consensus 805 ~~~v~V~~CGP~~m~~~vr~~~~~~~~~~~~~~~~h~E~ 843 (844)
...||+|||++|++++++.+.+.+.+ ...+-|.
T Consensus 113 --~~~vy~CGP~~mm~~v~~~l~~~Gv~----~~vslE~ 145 (158)
T 3lrx_A 113 --WDLVFMVGPVGDQKQVFEVVKEYGVP----MKVDLHP 145 (158)
T ss_dssp --CSEEEEESCHHHHHHHHHHHGGGTCC----EEECC--
T ss_pred --CCEEEEECCHHHHHHHHHHHHHcCCC----EEEEeeH
Confidence 23699999999999999999886543 4555553
No 109
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.54 E-value=3.5e-15 Score=172.35 Aligned_cols=138 Identities=18% Similarity=0.236 Sum_probs=98.7
Q ss_pred chHHHHHHHHHHHccc--CCCCcCHHHHhhcc-------CCCCC----------HHHHHHHHHHHhcccCCCCCCceeHH
Q 042007 98 ENDAWRSIERRFQQFA--VSGRLPKDKFGICV-------GMGES----------TEFSVGVFEALARRRKVNTENGITKE 158 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l-------g~~~~----------~~~~~~lf~~l~~~~~~d~dG~I~f~ 158 (844)
..++.+++++.|+.+| +||.|+.+||..++ |...+ ...+.++|+.+| .|+||.|+|+
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D----~d~dG~I~~~ 401 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD----MDGSGSIEYS 401 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHC----TTCCSSBCHH
T ss_pred cHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhc----CCCCCcCcHH
Confidence 3456778888888888 89999999996544 33322 556777888655 5789999999
Q ss_pred HHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHH
Q 042007 159 EVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMW 238 (844)
Q Consensus 159 EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~ 238 (844)
||+.++........+++++.+|+.||+|+||+||.+||++++..... ...++.++.+|+++|.|+||.|+|+
T Consensus 402 Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~--------~~~~~~~~~~~~~~D~d~dG~I~~~ 473 (486)
T 3mwu_A 402 EFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS--------SIQMEELESIIEQVDNNKDGEVDFN 473 (486)
T ss_dssp HHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC----------------------------CCCCSSCSSSBCHH
T ss_pred HHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--------CCCHHHHHHHHHHhCCCCCCcEeHH
Confidence 99998876655667889999999999999999999999999964321 1235568889999999999999999
Q ss_pred HHHHHHHcC
Q 042007 239 QLEILLRGM 247 (844)
Q Consensus 239 EF~~ll~~~ 247 (844)
||.++|.+.
T Consensus 474 EF~~~~~~~ 482 (486)
T 3mwu_A 474 EFVEMLQNF 482 (486)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999754
No 110
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.53 E-value=8.6e-15 Score=154.81 Aligned_cols=142 Identities=11% Similarity=0.112 Sum_probs=104.8
Q ss_pred HHHHHHHccc--CCCCcCHHHHhhcc-------CCCCCHHHHH----HHHHHHhcccCCCCCCceeHHHHHHHHHHh---
Q 042007 104 SIERRFQQFA--VSGRLPKDKFGICV-------GMGESTEFSV----GVFEALARRRKVNTENGITKEEVRMFWEDM--- 167 (844)
Q Consensus 104 ~l~~~F~~ld--~dG~is~~eF~~~l-------g~~~~~~~~~----~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~--- 167 (844)
++.+.|+.+| ++|.|+.+||..++ |...+...+. ++|+.++ .|+||.|+++||..++...
T Consensus 105 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D----~~~dg~i~~~ef~~~~~~~~~~ 180 (272)
T 2be4_A 105 EFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFD----KNKDGRLDLNDLARILALQENF 180 (272)
T ss_dssp HHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHC----SSCSSEEEHHHHGGGSCCSSCS
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhc----cCCCCcCcHHHHHHHHhhhHHH
Confidence 3445555555 89999999999887 4444444443 4666444 6789999999999887531
Q ss_pred ---------ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHH
Q 042007 168 ---------TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMW 238 (844)
Q Consensus 168 ---------~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~ 238 (844)
.....++.++.+|+.||+|+||+||.+||++++............++++++.++.+|+.+|.|+||.|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~ 260 (272)
T 2be4_A 181 LLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260 (272)
T ss_dssp STTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHH
T ss_pred HhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence 11234678999999999999999999999999975443111112245555667779999999999999999
Q ss_pred HHHHHHHcCCC
Q 042007 239 QLEILLRGMVN 249 (844)
Q Consensus 239 EF~~ll~~~~~ 249 (844)
||..+|...|.
T Consensus 261 EF~~~~~~~p~ 271 (272)
T 2be4_A 261 ELALCLGLKHK 271 (272)
T ss_dssp HHHHHTTCCCC
T ss_pred HHHHHHccCCC
Confidence 99999987663
No 111
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.52 E-value=4.6e-14 Score=134.77 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=102.3
Q ss_pred HHHHHHHHHHccc--C-CCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCChH
Q 042007 101 AWRSIERRFQQFA--V-SGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDLD 173 (844)
Q Consensus 101 ~~~~l~~~F~~ld--~-dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~~ 173 (844)
+++++++.|+.+| + +|.|+.+||..++ |...+...+..++..++ . + |+|+||+.++... ......
T Consensus 12 ~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d----~--~--i~~~eF~~~~~~~~~~~~~~ 83 (146)
T 2qac_A 12 EKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG----D--N--LTYEQYLEYLSICVHDKDNV 83 (146)
T ss_dssp HHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC----S--E--ECHHHHHHHHHHTCCTTCCH
T ss_pred HHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhC----C--C--CCHHHHHHHHHHHhcCcchH
Confidence 4455667777666 8 9999999999886 66667777788777544 1 3 9999999999864 345668
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+.++.+|+.||+|++|+||.+||++++...+ ..+ .++.++.+|+.+ |+||.|+|+||..+|.
T Consensus 84 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g--~~~------~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWG--DAL------TDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHHTTCTTCSSEEEHHHHHHHHHHSS--SCC------CHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhC--CCC------CHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 8999999999999999999999999997532 222 356788899999 9999999999999985
No 112
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.52 E-value=7.9e-14 Score=158.00 Aligned_cols=182 Identities=12% Similarity=0.240 Sum_probs=117.6
Q ss_pred CCCccCcccccCCC--CCceEEEEEec-----------CCchHHHHHHHHhhcCCCCCCCCCCCcchhhhhhhhhccccc
Q 042007 572 PFEWHPFSITSAPG--DYYLSVHIRTL-----------GDWTTELKQRFEKVCEAPAPAKPNRGNLMRMETKSAANNANF 638 (844)
Q Consensus 572 ~~e~HPFTI~s~p~--~~~l~l~Ir~~-----------G~~T~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 638 (844)
+.+.++|||+|+|. .+.+.++|++. |..|+.|.++. +.|..|
T Consensus 231 ~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~----------~gg~~~--------------- 285 (458)
T 3qfs_A 231 RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE----------PVGENG--------------- 285 (458)
T ss_dssp BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCC----------SSCSSC---------------
T ss_pred CCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhc----------cCCccC---------------
Confidence 45899999999996 47788888652 77888887652 122110
Q ss_pred cccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCCCCCcEEEEEEEeC
Q 042007 639 EQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFKKGPERAYFYWVTR 718 (844)
Q Consensus 639 ~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~~~~~~v~l~W~~R 718 (844)
...+|.|.||+|.+..+......+||||||+|||||+|++++.......+. ...++.|+|++|
T Consensus 286 -----~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~------------~~~~~~Lf~G~R 348 (458)
T 3qfs_A 286 -----GRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK------------EVGETLLYYGCR 348 (458)
T ss_dssp -----CCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTC------------CCCCEEEEEEES
T ss_pred -----CceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCC------------CCCCEEEEEEeC
Confidence 013799999999876544445789999999999999999998653222211 246799999999
Q ss_pred CC-ChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCcccccccCCChHHHHH
Q 042007 719 EQ-GSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIKTHFARPNWRKVFG 797 (844)
Q Consensus 719 ~~-~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~~~~gRPd~~~v~~ 797 (844)
+. +++ .|.++++++++.. ...+++..+++.... +.. .|. .-+-+..++.+
T Consensus 349 ~~~~D~-ly~dEl~~l~~~g--~l~~l~~a~SRd~~~---k~y----Vqd-------------------~l~~~~~~l~~ 399 (458)
T 3qfs_A 349 RSDEDY-LYREELAQFHRDG--ALTQLNVAFSREQSH---KVY----VQH-------------------LLKQDREHLWK 399 (458)
T ss_dssp CTTTSC-TTHHHHHHHHHHT--SSSEEEEEETTSSSS---CCC----HHH-------------------HHHHTHHHHHH
T ss_pred CchHhh-hHHHHHHHHHHcC--CCCEEEEEEECCCCC---ccc----HhH-------------------HHHHhHHHHHH
Confidence 96 565 6888898887652 122566555553211 000 000 00111122222
Q ss_pred HHHhhCCCCcEEEEEeCCh-hHHHHHHHHHHhh
Q 042007 798 QLATDHESSRIGVFYCGSA-TLTKTLKELCLEF 829 (844)
Q Consensus 798 ~~~~~~~~~~v~V~~CGP~-~m~~~vr~~~~~~ 829 (844)
+... ...||+|||+ .|+++|++++.+.
T Consensus 400 -~l~~----~~~vYvCGp~~~M~~~V~~~L~~i 427 (458)
T 3qfs_A 400 -LIEG----GAHIYVCGDARNMARDVQNTFYDI 427 (458)
T ss_dssp -HHHT----TCEEEEEEETTTHHHHHHHHHHHH
T ss_pred -HhcC----CCEEEEECCCHHHHHHHHHHHHHH
Confidence 2221 2479999996 7999999988774
No 113
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.52 E-value=4.2e-14 Score=140.26 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=94.3
Q ss_pred cCCCCcCHHHHhhccC---------CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHh
Q 042007 113 AVSGRLPKDKFGICVG---------MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMC 183 (844)
Q Consensus 113 d~dG~is~~eF~~~lg---------~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~f 183 (844)
++||+|+.+||+.+|. ...+...++++++.++ .|++|.|+|+||+.++... ++++.+|+.|
T Consensus 16 ~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D----~d~~G~I~f~EF~~~~~~~------~~l~~aF~~f 85 (174)
T 2i7a_A 16 PRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALME----LKVNGRLDQEEFARLWKRL------VHYQHVFQKV 85 (174)
T ss_dssp C-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHC----SSCSSEECHHHHHHHHHHH------HHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHC----CCCCCcCCHHHHHHHHHHH------HHHHHHHHHh
Confidence 3899999999988872 2445667888888665 5779999999999988754 5799999999
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
| |+||+|+.+||+.+++........ ...++.++.|++++| |+||.|+|+||..+|...
T Consensus 86 D-d~~G~I~~~El~~~l~~l~~~~G~----~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~ 143 (174)
T 2i7a_A 86 Q-TSPGVLLSSDLWKAIENTDFLRGI----FISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL 143 (174)
T ss_dssp C-SBTTBEEGGGHHHHHHTCGGGTTC----CCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH
T ss_pred c-CCCCcCCHHHHHHHHHHhHhccCC----CCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH
Confidence 9 999999999999999754110011 123567889999999 999999999999988643
No 114
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.50 E-value=7.8e-14 Score=164.65 Aligned_cols=192 Identities=13% Similarity=0.210 Sum_probs=123.9
Q ss_pred CCcEEEEEcCCCCCCCccCcccccCCCC--CceEEEEEe-----------cCCchHHHHHHHHhhcCCCCCCCCCCCcch
Q 042007 559 SGMYLFVKCPDLSPFEWHPFSITSAPGD--YYLSVHIRT-----------LGDWTTELKQRFEKVCEAPAPAKPNRGNLM 625 (844)
Q Consensus 559 pGQyv~l~~p~~s~~e~HPFTI~s~p~~--~~l~l~Ir~-----------~G~~T~~L~~~~~~~~~~~~~~~~g~~~~~ 625 (844)
|.+++.-.+|. .+.|||||+|+|.. +.+.+.|++ .|..|..|.++. +.|..+
T Consensus 381 p~~~l~~~lp~---l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~----------~~Gd~~-- 445 (618)
T 3qe2_A 381 PIDHLCELLPR---LQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE----------PVGENG-- 445 (618)
T ss_dssp CHHHHHHHSCB---CCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCC----------CC------
T ss_pred CHHHHHHhccc---cccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhc----------ccCCCC--
Confidence 45554444444 48899999999964 678887754 377888887652 124110
Q ss_pred hhhhhhhhccccccccccCcCEEEEeCccCCCCCCCCCCCeEEEEEcccchhchHHHHHHHHHHhhhcCcchhhhcCCCC
Q 042007 626 RMETKSAANNANFEQIQASFPKILIKGPYGAPAQDYKNYDILLLIGLGIGATPFISIIKDLLNHIKSHERDTEFLENGFK 705 (844)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlVagGiGITp~lsil~~l~~~~~~~~~~~~~~~~~~~ 705 (844)
...+|.|.||+|.+..+......+||||||+|||||+|++++.......+.
T Consensus 446 ------------------~~~~v~v~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~----------- 496 (618)
T 3qe2_A 446 ------------------GRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK----------- 496 (618)
T ss_dssp -------------------CCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC-----------
T ss_pred ------------------cceEEEEEEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCC-----------
Confidence 014799999999876544445689999999999999999999875433221
Q ss_pred CCCcEEEEEEEeCCC-ChhhhHHHHHHHHhccCCCCeEEEEEEEecccCCCChhHHHHHHHHHhhhhcCCccccccCccc
Q 042007 706 KGPERAYFYWVTREQ-GSFEWFKGVMDDIADHDDKNVIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDIVSESRIK 784 (844)
Q Consensus 706 ~~~~~v~l~W~~R~~-~~~~wf~~~L~~l~~~~~~~~l~i~~ylT~~~~~~d~~~~~~~~~~~~~~~~~~~d~~sg~~~~ 784 (844)
...++.|+|++|+. +++ .|.++|+++.+.. ...+++..+++...+. .. .|
T Consensus 497 -~~~~~~L~~G~R~~~~D~-ly~~el~~~~~~g--~l~~l~~a~Srd~~~k---~y----Vq------------------ 547 (618)
T 3qe2_A 497 -EVGETLLYYGCRRSDEDY-LYREELAQFHRDG--ALTQLNVAFSREQSHK---VY----VQ------------------ 547 (618)
T ss_dssp -CCCCEEEEEEESCTTTSC-TTHHHHHHHHHHT--SSSEEEEEETTSSSSC---CC----HH------------------
T ss_pred -CCCCEEEEEecCCCcccc-chHHHHHHHHhcC--CCcEEEEEEcCCCCCC---Cc----HH------------------
Confidence 24679999999998 465 6888898887652 2236666666542110 00 00
Q ss_pred ccccCCChHHHHHHHHhhCCCCcEEEEEeCCh-hHHHHHHHHHHhh
Q 042007 785 THFARPNWRKVFGQLATDHESSRIGVFYCGSA-TLTKTLKELCLEF 829 (844)
Q Consensus 785 ~~~gRPd~~~v~~~~~~~~~~~~v~V~~CGP~-~m~~~vr~~~~~~ 829 (844)
+.-|-+.+++.+-+ .. ...||+|||+ .|+++|++++.+.
T Consensus 548 -d~l~~~~~~l~~~l-~~----~a~vYvCGp~~~M~~~V~~~L~~i 587 (618)
T 3qe2_A 548 -HLLKQDREHLWKLI-EG----GAHIYVCGDARNMARDVQNTFYDI 587 (618)
T ss_dssp -HHHHHTHHHHHHHH-HH----TCEEEEEEETTTHHHHHHHHHHHH
T ss_pred -HHHHHhHHHHHHHH-hC----CcEEEEECCchHHHHHHHHHHHHH
Confidence 00011112222222 11 2379999997 9999999988774
No 115
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.48 E-value=2.2e-14 Score=150.94 Aligned_cols=139 Identities=12% Similarity=0.158 Sum_probs=106.0
Q ss_pred HHHHHHHHHccc--CCCCcCHHHHhhccC---CC------CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---
Q 042007 102 WRSIERRFQQFA--VSGRLPKDKFGICVG---MG------ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM--- 167 (844)
Q Consensus 102 ~~~l~~~F~~ld--~dG~is~~eF~~~lg---~~------~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~--- 167 (844)
.+++++.|+.+| +||.|+.+||..++. .. .....+.++|..++ .|+||.|+|+||+.++...
T Consensus 15 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~Ef~~~~~~~~~~ 90 (263)
T 2f33_A 15 ASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYG----QRDDGKIGIVELAHVLPTEENF 90 (263)
T ss_dssp HHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHT----TGGGCCBCHHHHHHHTTSCTTH
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhC----CCCCCcCcHHHHHHHHhhhhhH
Confidence 344555555555 899999999998873 11 12255677888665 5779999999999987543
Q ss_pred ------ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--cccccccccchHHHHHHHHHHhCCCCCCceeHHH
Q 042007 168 ------TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQ 239 (844)
Q Consensus 168 ------~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~E 239 (844)
......++++.+|+.||+|++|+|+.+||+.++..... +..++ ++..++.++.+|+.+|.|++|.|+|+|
T Consensus 91 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~--~~~~~~~~~~~~~~~d~~~dg~i~~~e 168 (263)
T 2f33_A 91 LLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVD--DTKLAEYTDLMLKLFDSNNDGKLELTE 168 (263)
T ss_dssp HHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCC--HHHHHHHHHHHHHHTCSSSSSCBCHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCC--HHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence 44567788999999999999999999999999975422 22232 444555677799999999999999999
Q ss_pred HHHHHHc
Q 042007 240 LEILLRG 246 (844)
Q Consensus 240 F~~ll~~ 246 (844)
|..++..
T Consensus 169 f~~~~~~ 175 (263)
T 2f33_A 169 MARLLPV 175 (263)
T ss_dssp HHHHSCT
T ss_pred HHHHHHH
Confidence 9988853
No 116
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.48 E-value=2e-13 Score=133.41 Aligned_cols=119 Identities=16% Similarity=0.236 Sum_probs=97.2
Q ss_pred HHccc--CCCCcCHHHHhhcc---CC-----CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 109 FQQFA--VSGRLPKDKFGICV---GM-----GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 109 F~~ld--~dG~is~~eF~~~l---g~-----~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
|..+| +||.|+.+||..++ |. ..+...+.++++.++ .|++|.|+|+||+.++... +.++.
T Consensus 5 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~eF~~~~~~~------~~~~~ 74 (165)
T 1k94_A 5 YFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLD----RDHTGKMGFNAFKELWAAL------NAWKE 74 (165)
T ss_dssp HHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHC----TTCSSCBCHHHHHHHHHHH------HHHHH
T ss_pred HHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHH------HHHHH
Confidence 44444 89999999999887 43 446677888888665 5779999999999988753 68999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+|+.||+|++|+|+.+|+++++..... . ..++.++.+++.+ |++|.|+|+||..++...
T Consensus 75 ~F~~~D~d~~G~i~~~el~~~l~~~g~--~------~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 133 (165)
T 1k94_A 75 NFMTVDQDGSGTVEHHELRQAIGLMGY--R------LSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL 133 (165)
T ss_dssp HHHHHCTTCCSBCCHHHHHHHHHHTTC--C------CCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred HHHHhCCCCCceECHHHHHHHHHHhCC--C------CCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 999999999999999999999975321 1 2356678889888 899999999999998643
No 117
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.48 E-value=2.4e-13 Score=133.23 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=97.3
Q ss_pred HHHHcccCCCCcCHHHHhhcc---CC-----CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 107 RRFQQFAVSGRLPKDKFGICV---GM-----GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 107 ~~F~~ld~dG~is~~eF~~~l---g~-----~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
..|+. ++||.|+.+||..++ |. ..+...+.++|+.++ .|++|.|+|+||+.++... +.++.
T Consensus 8 ~~~D~-d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D----~~~~g~i~~~eF~~~~~~~------~~~~~ 76 (167)
T 1gjy_A 8 FASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD----RDMSGTMGFNEFKELWAVL------NGWRQ 76 (167)
T ss_dssp HHHHC-CTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHC----TTCCSCBCHHHHHHHHHHH------HHHHH
T ss_pred HHHHc-CCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHC----CCCCCcCCHHHHHHHHHHH------HHHHH
Confidence 34443 489999999999887 43 446677888888665 5779999999999998754 68999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+|+.||+|++|+|+.+|++.++..... . ..++.++.+|+.+ |++|.|+|+||..++...
T Consensus 77 ~F~~~D~d~~G~i~~~el~~~l~~~g~--~------~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 77 HFISFDSDRSGTVDPQELQKALTTMGF--R------LNPQTVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHHHCTTCCSEECHHHHHHHHHTTTC--C------CCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHHHhCCCCCCcCCHHHHHHHHHHcCC--C------CCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 999999999999999999999965321 1 2356788899999 899999999999988643
No 118
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.48 E-value=6.6e-14 Score=148.00 Aligned_cols=143 Identities=12% Similarity=0.179 Sum_probs=105.2
Q ss_pred HHHHHHHHccc--CCCCcCHHHHhhcc-------CC--CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHH--------
Q 042007 103 RSIERRFQQFA--VSGRLPKDKFGICV-------GM--GESTEFSVGVFEALARRRKVNTENGITKEEVRMF-------- 163 (844)
Q Consensus 103 ~~l~~~F~~ld--~dG~is~~eF~~~l-------g~--~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~-------- 163 (844)
+++++.|+.+| +||.|+.+||..++ |. ..+...+..+.+.+...-+.|+||.|+|+||..+
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~ 90 (272)
T 2be4_A 11 AGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENF 90 (272)
T ss_dssp HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhhHHH
Confidence 34455555555 89999999998865 44 4455555554432222112578999999999999
Q ss_pred ---HHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc--cccccccccchHHHHHHHHHHhCCCCCCceeHH
Q 042007 164 ---WEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS--ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMW 238 (844)
Q Consensus 164 ---l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~--~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~ 238 (844)
+.........++++.+|+.||+|+||+|+.+||+.++..... +..++ ++..++.++.+|+.+|.|+||.|+++
T Consensus 91 ~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~--~~~~~~~~~~~~~~~D~~~dg~i~~~ 168 (272)
T 2be4_A 91 LLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIP--PNKLDEYTDAMMKIFDKNKDGRLDLN 168 (272)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHCSSCSSEEEHH
T ss_pred HHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHhccCCCCcCcHH
Confidence 444445677889999999999999999999999999976432 12222 44455667889999999999999999
Q ss_pred HHHHHHHcC
Q 042007 239 QLEILLRGM 247 (844)
Q Consensus 239 EF~~ll~~~ 247 (844)
||..++...
T Consensus 169 ef~~~~~~~ 177 (272)
T 2be4_A 169 DLARILALQ 177 (272)
T ss_dssp HHGGGSCCS
T ss_pred HHHHHHhhh
Confidence 998888543
No 119
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.47 E-value=4.8e-13 Score=139.17 Aligned_cols=140 Identities=10% Similarity=-0.003 Sum_probs=108.8
Q ss_pred HHHHHHHHHccc---CCCCcCHHHHhhcc-----CC----C-------CCHHHHHHHHHHHhcccCCCCCCceeHHHHHH
Q 042007 102 WRSIERRFQQFA---VSGRLPKDKFGICV-----GM----G-------ESTEFSVGVFEALARRRKVNTENGITKEEVRM 162 (844)
Q Consensus 102 ~~~l~~~F~~ld---~dG~is~~eF~~~l-----g~----~-------~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~ 162 (844)
+..+...|++.. ++..++..++..+| ++ . ....++..+|+++| .|+||.|+|.||+.
T Consensus 81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD----~~~~G~I~f~ef~~ 156 (261)
T 1eg3_A 81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYD----TGRTGRIRVLSFKT 156 (261)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHC----TTCCSEEEHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHcc----CCCCceEeHHHHHH
Confidence 445566666533 56678888877766 11 1 12457778888666 57799999999999
Q ss_pred HHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-----cccccccccchHHHHHHHHHHhCCCCCCceeH
Q 042007 163 FWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-----ENKLSNLKENSSTYAALIMEKLDPDCKGYIEM 237 (844)
Q Consensus 163 ~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-----~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~ 237 (844)
+++.++.+..+||++.+|++|| |+||+|+++|+..+++.... +......++..++.++.+|+.+| +||.||.
T Consensus 157 aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~ 233 (261)
T 1eg3_A 157 GIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEA 233 (261)
T ss_dssp HHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCH
T ss_pred HHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCH
Confidence 9999999999999999999999 99999999999999965311 11111124567889999999996 8899999
Q ss_pred HHHHHHHHcCC
Q 042007 238 WQLEILLRGMV 248 (844)
Q Consensus 238 ~EF~~ll~~~~ 248 (844)
+||.+-++..|
T Consensus 234 ~EFl~~~~~dp 244 (261)
T 1eg3_A 234 ALFLDWMRLEP 244 (261)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHhCc
Confidence 99999998766
No 120
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.47 E-value=2.4e-13 Score=137.28 Aligned_cols=121 Identities=13% Similarity=0.174 Sum_probs=98.1
Q ss_pred HHHHHcccCCCCcCHHHHhhcc---CC-----CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHH
Q 042007 106 ERRFQQFAVSGRLPKDKFGICV---GM-----GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQ 177 (844)
Q Consensus 106 ~~~F~~ld~dG~is~~eF~~~l---g~-----~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~ 177 (844)
+..|+. ++||.|+.+||..++ |. ..+...+.++|+.++ .|+||.|+|+||+.++... ++++
T Consensus 38 F~~~D~-d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D----~d~~g~i~~~eF~~~~~~~------~~~~ 106 (198)
T 1juo_A 38 YFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD----RDMSGTMGFNEFKELWAVL------NGWR 106 (198)
T ss_dssp HHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHC----TTCSSCEEHHHHHHHHHHH------HHHH
T ss_pred HHHHhC-CCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhC----CCCCCeECHHHHHHHHHHH------HHHH
Confidence 444443 499999999999887 43 346667888888665 5779999999999998754 6899
Q ss_pred HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 178 IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 178 ~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+|+.||+|+||+|+.+||++++..... . ..++.++.+|+.+ |+||.|+|+||..++...
T Consensus 107 ~~F~~~D~d~~G~I~~~el~~~l~~~g~--~------~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~ 166 (198)
T 1juo_A 107 QHFISFDTDRSGTVDPQELQKALTTMGF--R------LSPQAVNSIAKRY--STNGKITFDDYIACCVKL 166 (198)
T ss_dssp HHHHTTCTTCCSEECHHHHHHHHHHTTC--C------CCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHhCC--C------CCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 9999999999999999999999975321 1 2356788899999 899999999999988653
No 121
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.43 E-value=5.3e-13 Score=140.25 Aligned_cols=136 Identities=11% Similarity=0.189 Sum_probs=103.6
Q ss_pred HHHHHHHHHccc--CCCCcCHHHHhhcc-------CCCCCHHHHHH----HHHHHhcccCCCCCCceeHHHHHHHHHH--
Q 042007 102 WRSIERRFQQFA--VSGRLPKDKFGICV-------GMGESTEFSVG----VFEALARRRKVNTENGITKEEVRMFWED-- 166 (844)
Q Consensus 102 ~~~l~~~F~~ld--~dG~is~~eF~~~l-------g~~~~~~~~~~----lf~~l~~~~~~d~dG~I~f~EF~~~l~~-- 166 (844)
.+++.+.|+.+| ++|.|+.+||..++ |...+...+.+ +|..++ .|+||.|+|+||+.++..
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d----~~~dg~i~~~ef~~~~~~~~ 177 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFD----SNNDGKLELTEMARLLPVQE 177 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTC----SSSSSCBCHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcC----CCCCCeEcHHHHHHHHHHHH
Confidence 345677788777 89999999999887 55555555555 555333 678999999999998753
Q ss_pred -----h-ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcc--ccccccccchHHHHHHHHHH-hCCCCCCceeH
Q 042007 167 -----M-TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASE--NKLSNLKENSSTYAALIMEK-LDPDCKGYIEM 237 (844)
Q Consensus 167 -----~-~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~--~~l~~~~~~~~e~~~~if~~-~D~d~dG~It~ 237 (844)
. .....++.++.+|+.||+|+||+||.+||+.++...... ..++ ++.++.+++. +|.|+||.|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~------~~e~~~~~~~~~D~d~dG~i~~ 251 (263)
T 2f33_A 178 NFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELD------INNISTYKKNIMALSDGGKLYR 251 (263)
T ss_dssp CSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCC------TTTHHHHHHHHHTTSBTTEECG
T ss_pred HHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHhhccCCCCeEcH
Confidence 1 234667899999999999999999999999999754431 1222 2345567776 69999999999
Q ss_pred HHHHHHHHcC
Q 042007 238 WQLEILLRGM 247 (844)
Q Consensus 238 ~EF~~ll~~~ 247 (844)
+||..+|...
T Consensus 252 ~EF~~~~~~~ 261 (263)
T 2f33_A 252 TDLALILSAG 261 (263)
T ss_dssp GGTHHHHCCS
T ss_pred HHHHHHHhcc
Confidence 9999999754
No 122
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.43 E-value=6.5e-13 Score=133.40 Aligned_cols=125 Identities=13% Similarity=0.065 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
.++++++.+.++. +++|.|+.+||...+.. .....++|+.++ .|++|.|+.+||..++..+.....++.++.
T Consensus 62 ~~~~~~l~~~~D~-d~dG~I~~~EF~~~~~~---~~~~~~~F~~~D----~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~ 133 (191)
T 1y1x_A 62 LATTEKLLHMYDK-NHSGEITFDEFKDLHHF---ILSMREGFRKRD----SSGDGRLDSNEVRAALLSSGYQVSEQTFQA 133 (191)
T ss_dssp HHHHHHHHHHHCT-TCSSSBCHHHHHHHHHH---HHHHHHHHHHHC----TTSSSCBCHHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCeEcHHHHHHHHHH---HHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHhCCCCCHHHHHH
Confidence 4556666666654 58999999999987742 245677788665 577999999999999998877778899999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCc--eeHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGY--IEMWQLEILLR 245 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~--It~~EF~~ll~ 245 (844)
+|+.+|.|+||+|+.+||..++... +.+..+|+.+|.|++|+ ++++||..++.
T Consensus 134 ~~~~~D~d~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 134 LMRKFDRQRRGSLGFDDYVELSIFV--------------CRVRNVFAFYDRERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHHHH--------------HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred HHHHhCCCCCCeEeHHHHHHHHHHH--------------HHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence 9999999999999999999998531 34668999999999999 78999999875
No 123
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.43 E-value=2.9e-14 Score=141.90 Aligned_cols=139 Identities=15% Similarity=0.192 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHccc--CCCCcCHHHHhhccC---------CCCCHHHHHHHHHH-----HhcccCCCCCCceeHHHHHH
Q 042007 99 NDAWRSIERRFQQFA--VSGRLPKDKFGICVG---------MGESTEFSVGVFEA-----LARRRKVNTENGITKEEVRM 162 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld--~dG~is~~eF~~~lg---------~~~~~~~~~~lf~~-----l~~~~~~d~dG~I~f~EF~~ 162 (844)
.++.+++++.|+.+| +||.|+.+||..++. ...+...+.++.+. +...-+.|+||.|+++| .
T Consensus 10 ~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~ 87 (186)
T 2hps_A 10 AYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--D 87 (186)
T ss_dssp HHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--H
T ss_pred HHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--H
Confidence 356788889999888 899999999998872 22222223333200 01222257799999999 5
Q ss_pred HHHHhccC-ChHHHHHHHH--HHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHH
Q 042007 163 FWEDMTKK-DLDARLQIFF--DMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQ 239 (844)
Q Consensus 163 ~l~~~~~~-~~~~~l~~~F--~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~E 239 (844)
++...... ...+++..+| .+||+|+||+|+.+||++++.... .. ..++.++.+|+.+|.|+||+|+++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g--~~------~~~~~~~~~~~~~D~d~dG~i~~~e 159 (186)
T 2hps_A 88 SLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG--PD------LTDDKAITCFNTLDFNKNGQISRDE 159 (186)
T ss_dssp HHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHC--TT------CCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred HHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhC--CC------CCHHHHHHHHHHHcCCCCCcCcHHH
Confidence 55544321 2234566667 889999999999999999997542 12 2367789999999999999999999
Q ss_pred HHHHHHcC
Q 042007 240 LEILLRGM 247 (844)
Q Consensus 240 F~~ll~~~ 247 (844)
|..+|...
T Consensus 160 f~~~~~~~ 167 (186)
T 2hps_A 160 FLVTVNDF 167 (186)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999765
No 124
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.40 E-value=7.8e-13 Score=119.90 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-c
Q 042007 128 GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-E 206 (844)
Q Consensus 128 g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~ 206 (844)
+...++..+.++++.+ |++|.|+|+||+.++.. .....++++.+|+.||+|+||+|+.+||+.++..... .
T Consensus 4 ~~~~~~~ei~~~~~~~------D~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~ 75 (109)
T 3fs7_A 4 TDILSAKDIESALSSC------QAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSA 75 (109)
T ss_dssp GGTSCHHHHHHHHHHT------CSTTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTS
T ss_pred cCcCCHHHHHHHHHhc------CCCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccc
Confidence 4444566677777743 35899999999999864 3467889999999999999999999999998865321 1
Q ss_pred ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 207 NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 207 ~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
....++.++.+|+++|.|+||.|+|+||..+|.
T Consensus 76 ------~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 76 ------RVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp ------CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred ------ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 122467789999999999999999999999985
No 125
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.39 E-value=3.8e-13 Score=146.82 Aligned_cols=125 Identities=15% Similarity=0.203 Sum_probs=101.1
Q ss_pred HHHHHHccc--CCCCcCHHHHhhcc-CCCCCHHHHHH-HHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHH
Q 042007 105 IERRFQQFA--VSGRLPKDKFGICV-GMGESTEFSVG-VFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFF 180 (844)
Q Consensus 105 l~~~F~~ld--~dG~is~~eF~~~l-g~~~~~~~~~~-lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F 180 (844)
+...|..+| ++|.|+.+||..++ |...+...+.. +|..++ .|+||.|+|+||+.++.... .++.+|
T Consensus 190 l~~~F~~~D~d~dG~Is~~El~~~l~g~~~~~~ei~~~l~~~~D----~d~dG~Is~~EF~~~l~~~~------~l~~~F 259 (323)
T 1ij5_A 190 LVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYAD----EDESDDVGFSEYVHLGLCLL------VLRILY 259 (323)
T ss_dssp SCCCHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHC----TTCSSCEEHHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHcCCCCCHHHHHHHHHHHhc----CCCCCEEeHHHHHHHHHHHH------HHHHHH
Confidence 444566656 88999999998886 44445566778 888665 57899999999999997654 899999
Q ss_pred HHhccCCCCcccHHHHHHHH-HhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 181 DMCDKNGDGILTEDEVREVI-VLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 181 ~~fD~d~dG~It~eEl~~il-~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.||.|+||+||.+||+.++ ...+ ..++ ++.+..+|+.+|.|+||.|+|+||..+|...
T Consensus 260 ~~~D~d~dG~Is~~El~~~l~~~~g--~~ls------~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~ 319 (323)
T 1ij5_A 260 AFADFDKSGQLSKEEVQKVLEDAHI--PESA------RKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM 319 (323)
T ss_dssp HHTCSSSCSSEEHHHHHHHHHHTTC--CGGG------CSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred HHhCCCCCCCccHHHHHHHHHHHcC--CCCC------HHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999999999999 6432 2222 3347889999999999999999999999764
No 126
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.38 E-value=1.7e-12 Score=117.69 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-ccccc
Q 042007 132 STEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-ENKLS 210 (844)
Q Consensus 132 ~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~~~l~ 210 (844)
++..++++++.++ .+|.|+|+||+.++.. .....++++.+|+.||+|++|+|+.+||+.++..... +.
T Consensus 7 s~~ei~~~~~~~d------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~--- 75 (109)
T 5pal_A 7 KADDINKAISAFK------DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR--- 75 (109)
T ss_dssp CHHHHHHHHHHTC------STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC---
T ss_pred CHHHHHHHHHHhC------CCCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC---
Confidence 4555666666433 3899999999998864 3456889999999999999999999999999976421 11
Q ss_pred ccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 211 NLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 211 ~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
...++.++.+|+.+|.|+||.|+|+||..+|.+
T Consensus 76 ---~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 76 ---DLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp ---CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 223667899999999999999999999999874
No 127
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.38 E-value=1.9e-12 Score=117.10 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=83.3
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-
Q 042007 127 VGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS- 205 (844)
Q Consensus 127 lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~- 205 (844)
+|. .++..+.++++.++ ++|.|+|+||+.++.. .....++++.+|+.||+|++|+|+.+||+.++.....
T Consensus 3 lG~-~~~~e~~~l~~~~d------~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~ 73 (108)
T 2pvb_A 3 FAG-LKDADVAAALAACS------AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPS 73 (108)
T ss_dssp CTT-SCHHHHHHHHHHTC------STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTT
T ss_pred cCC-CCHHHHHHHHHHhC------CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhcc
Confidence 455 56667777777533 5899999999998853 2456789999999999999999999999999865321
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+. ...++.++.+|+++|.|+||.|+|+||..+|.
T Consensus 74 g~------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 74 AR------ALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp SC------CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CC------CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 11 22366788999999999999999999999885
No 128
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.37 E-value=1.8e-12 Score=156.04 Aligned_cols=126 Identities=15% Similarity=0.200 Sum_probs=103.5
Q ss_pred HHHHHHHHHccc-CCCCcCHHHHhhcc-----------CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc
Q 042007 102 WRSIERRFQQFA-VSGRLPKDKFGICV-----------GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK 169 (844)
Q Consensus 102 ~~~l~~~F~~ld-~dG~is~~eF~~~l-----------g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~ 169 (844)
.+++++.|+.+| +||.|+.+||+.++ +...+...++.+++.++ .|+||.|+|+||..++..+
T Consensus 531 ~~~l~~~F~~~Dd~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D----~d~~G~I~f~EF~~l~~~~-- 604 (714)
T 3bow_A 531 GDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD----EDGSGKLGLKEFYILWTKI-- 604 (714)
T ss_dssp CHHHHHHHHHHHGGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHC----CSSCSSBCHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHH--
Confidence 455566666555 89999999998887 23456677888888665 5779999999999999765
Q ss_pred CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 170 KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 170 ~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
++++.+|+.||+|+||+|+.+||++++..... ...++.++.+|+.+| |+||.|+|+||..+|..
T Consensus 605 ----~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~--------~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 605 ----QKYQKIYREIDVDRSGTMNSYEMRKALEEAGF--------KLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp ----HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTE--------ECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC--------CCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 68999999999999999999999999975431 123577889999999 99999999999998864
No 129
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.36 E-value=4.9e-12 Score=124.30 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
.++++++.+.++. +++|.|+.+||...+.. .....++|+.++ .|++|.|+.+||..++..+.....++.++.
T Consensus 43 ~~~~~~l~~~~D~-~~~g~i~~~ef~~~~~~---~~~~~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~ 114 (172)
T 2znd_A 43 PVTVRSIISMFDR-ENKAGVNFSEFTGVWKY---ITDWQNVFRTYD----RDNSGMIDKNELKQALSGFGYRLSDQFHDI 114 (172)
T ss_dssp HHHHHHHHHHHCS-SSSSEECHHHHHHHHHH---HHHHHHHHHHHC----TTCSSEECHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCcCCHHHHHHHHHH---HHHHHHHHHHHC----CCCCCccCHHHHHHHHHHcCCCCCHHHHHH
Confidence 4556666666654 58999999999987642 234677788655 577999999999999998877778899999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCcee--HHHHHHHHHc
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIE--MWQLEILLRG 246 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It--~~EF~~ll~~ 246 (844)
+|+.+|.|+||+|+.+||..++... +.+..+|+.+|.|+||+|+ ++||..++..
T Consensus 115 ~~~~~d~~~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 115 LIRKFDRQGRGQIAFDDFIQGCIVL--------------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHHHHCTTCSSSEEHHHHHHHHHHH--------------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHH--------------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 9999999999999999999988532 3567899999999999996 7888887753
No 130
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.36 E-value=4.4e-13 Score=127.01 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=64.3
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDM-TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLK 213 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~ 213 (844)
...++|+.++ .|++|.|+|+||+.++... ......+.++.+|+.||+|++|+|+.+||+.++..... .
T Consensus 4 ~~~~l~~~~D----~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~------ 72 (135)
T 3h4s_E 4 TEKSMLLETT----STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI-E------ 72 (135)
T ss_dssp -------------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC-C------
T ss_pred hHHHHHHHHc----CCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC-C------
Confidence 3566777665 5789999999999998753 33345788999999999999999999999999864321 1
Q ss_pred cchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 214 ENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 214 ~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 73 ~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 73 GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp CCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 2235678999999999999999999999999765
No 131
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.36 E-value=3.2e-13 Score=129.42 Aligned_cols=104 Identities=15% Similarity=0.200 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc----
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS---- 205 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~---- 205 (844)
....+|..++ .|+||.|+++||..++.... ....+++++.+|++||+|+||+|+.+||+.++.....
T Consensus 28 ~~~~~f~~~D----~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~ 103 (143)
T 3a4u_B 28 ASFSQPGSMG----LDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGS 103 (143)
T ss_dssp ---------------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC--------
T ss_pred CCHHHHHHhC----CCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhcc
Confidence 3455677666 57799999999999887653 2356788999999999999999999999998854321
Q ss_pred --cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 206 --ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 206 --~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
...++ +++.++.++.+|+++|.|+||.|+++||..+|
T Consensus 104 ~~g~~~s--~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 104 EQAPLMS--EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -----CC--HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred ccCCCCC--HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 11232 44456667788899999999999999998876
No 132
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.36 E-value=2.1e-12 Score=117.23 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=83.7
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-
Q 042007 127 VGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS- 205 (844)
Q Consensus 127 lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~- 205 (844)
+|...+...++++++.+ |++|.|+|+||+.++.. .....++++.+|+.||+|+||+|+.+||+.++.....
T Consensus 3 lG~~~t~~e~~~~~~~~------d~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~ 74 (110)
T 1pva_A 3 AKDLLKADDIKKALDAV------KAEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAAD 74 (110)
T ss_dssp HHHHSCHHHHHHHHHHT------CSTTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTT
T ss_pred ccccCCHHHHHHHHHhc------CCCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhc
Confidence 45555666677777743 35899999999998842 3456789999999999999999999999999865321
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.. ...++.++.+|+.+|.|++|.|+|+||..+|..
T Consensus 75 g~------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 75 GR------DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CC------CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CC------CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 11 123667899999999999999999999999864
No 133
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.35 E-value=3.4e-12 Score=115.65 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=84.6
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-
Q 042007 127 VGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS- 205 (844)
Q Consensus 127 lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~- 205 (844)
+|...++..+.+++..++ ++|.|+|+||+.++... ....++++.+|+.||+|+||+|+.+||+.++.....
T Consensus 3 lg~~~~~~e~~~~~~~~d------~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~ 74 (109)
T 1bu3_A 3 FSGILADADVAAALKACE------AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAG 74 (109)
T ss_dssp CSCSSCHHHHHHHHHHTC------STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTT
T ss_pred ccccCCHHHHHHHHHHhC------CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccc
Confidence 566667777777777533 58999999999987532 356789999999999999999999999999976421
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+. ...++.++.+|+++|.|+||.|+|+||..+|.
T Consensus 75 g~------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 75 AR------ALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CC------CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CC------CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 11 12356788999999999999999999999885
No 134
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.34 E-value=2.1e-12 Score=116.90 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-cccc
Q 042007 131 ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-ENKL 209 (844)
Q Consensus 131 ~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~~~l 209 (844)
.++..+.++++.+ |++|.|+|+||+.++.. .....++++.+|+.||+|+||+|+.+||+.++..... ...
T Consensus 6 ~t~~e~~~~~~~~------d~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~- 76 (109)
T 1rwy_A 6 LSAEDIKKAIGAF------TAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD- 76 (109)
T ss_dssp SCHHHHHHHHHTT------CSTTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCC-
T ss_pred CCHHHHHHHHHHc------CCCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCC-
Confidence 3445555666532 35899999999998853 2456789999999999999999999999999976421 112
Q ss_pred cccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 210 SNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 210 ~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++.++.+|+.+|.|+||.|+|+||..+|.+
T Consensus 77 -----~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 77 -----LSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp -----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 23567889999999999999999999999864
No 135
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.34 E-value=3.7e-12 Score=115.17 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-cc
Q 042007 129 MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-EN 207 (844)
Q Consensus 129 ~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~~ 207 (844)
...++..++++++.+ |++|.|+|+||+.++.. .....++++.+|+.||+|+||+|+.+||+.++..... +.
T Consensus 4 ~~~t~~e~~~~~~~~------d~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 75 (108)
T 1rro_A 4 DILSAEDIAAALQEC------QDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75 (108)
T ss_dssp GTSCHHHHHHHHHHT------CSTTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSC
T ss_pred ccCCHHHHHHHHHHc------cCCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccC
Confidence 334556667777643 35899999999998842 2456789999999999999999999999998865321 11
Q ss_pred cccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 208 KLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 208 ~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
...++.++.+|+++|.|+||.|+|+||..+|.
T Consensus 76 ------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 76 ------ELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp ------CCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 22356788999999999999999999999885
No 136
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.30 E-value=1.8e-12 Score=152.87 Aligned_cols=129 Identities=11% Similarity=0.223 Sum_probs=64.9
Q ss_pred HHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHH
Q 042007 105 IERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIF 179 (844)
Q Consensus 105 l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~ 179 (844)
+++.|+.+| +||+|+.+||..++ |...++..+.++|+.++ .|++|.|+|+||+.++..+.. +++++.+
T Consensus 13 l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D----~d~~G~I~f~EF~~~~~~l~~---~~el~~a 85 (624)
T 1djx_A 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECD----HSQTDSLEDEEIETFYKMLTQ---RAEIDRA 85 (624)
T ss_dssp -----------------------------------------------------------CTTHHHHHHTC---CHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCeEeHHHHHHHHHHhcc---HHHHHHH
Confidence 455566555 89999999999887 33344455677777555 577999999999999987643 3679999
Q ss_pred HHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCC----CCCceeHHHHHHHHHcC
Q 042007 180 FDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPD----CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d----~dG~It~~EF~~ll~~~ 247 (844)
|+.||+| +|+||.+||++++........ ..++.++.||+++|.| ++|.|+|+||..+|...
T Consensus 86 F~~fD~~-~G~Is~~EL~~fL~~~qge~~------ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 86 FEEAAGS-AETLSVERLVTFLQHQQREEE------AGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp HHHHHTT-SSSEEHHHHHHHHHHTSCCSS------CSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred HHHhcCC-CCeecHHHHHHHHHHHhCCCC------CCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 9999986 999999999999964322111 2367799999999998 79999999999999854
No 137
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.30 E-value=8.1e-12 Score=126.67 Aligned_cols=123 Identities=18% Similarity=0.170 Sum_probs=100.6
Q ss_pred CCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccC-ChHHHHHHHHHHhccCCCCcc
Q 042007 114 VSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKK-DLDARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 114 ~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~-~~~~~l~~~F~~fD~d~dG~I 191 (844)
++|+|+.+|+..++. +..+...+.++|+.++.. +++|.|+++||..++..+... ..++.++.+|+.+|.|++|+|
T Consensus 12 ~~g~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~---~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 88 (207)
T 2d8n_A 12 KSGALSKEILEELQLNTKFSEEELCSWYQSFLKD---CPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTL 88 (207)
T ss_dssp CTTCCCHHHHHHHHHHSSCCHHHHHHHHHHHHHH---CTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEE
T ss_pred cCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhh---CCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeE
Confidence 789999999988872 233567788899977632 159999999999999887643 678899999999999999999
Q ss_pred cHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 192 TEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 192 t~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.+||..++...... ..++.+..+|+.+|.|++|+|+++||..++...
T Consensus 89 ~~~Ef~~~~~~~~~~--------~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 89 DFKEYVIALHMTTAG--------KTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp EHHHHHHHHHHHSCS--------SSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHcCC--------CHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 999999999653321 123457789999999999999999999999764
No 138
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.29 E-value=2e-12 Score=141.02 Aligned_cols=130 Identities=15% Similarity=0.074 Sum_probs=104.9
Q ss_pred CchHHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCC
Q 042007 97 KENDAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKD 171 (844)
Q Consensus 97 ~~~~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~ 171 (844)
...+++.++...|..+| ++|.|+.+||..++ |...+...+..+|..++ .|++|.|+|.||..++ .
T Consensus 116 Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D----~d~~G~I~f~ef~~l~------~ 185 (323)
T 1ij5_A 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE----NDTKGRMSYITLVAVA------N 185 (323)
T ss_dssp CCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHH----HCCSSTHHHHHHTTSH------H
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc----CCCCCcCcHHHHHhhh------h
Confidence 34567889999999998 89999999999887 55545566888888776 5779999999998765 2
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHH-HHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAAL-IMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~-if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..+.++.+|+.||.|+||+||.+||+.++ . . ..++ ++.+.. +|+.+|.|+||.|+|+||..+|..
T Consensus 186 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l-~-g--~~~~------~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 186 DLAALVADFRKIDTNSNGTLSRKEFREHF-V-R--LGFD------KKSVQDALFRYADEDESDDVGFSEYVHLGLC 251 (323)
T ss_dssp HHHTSCCCHHHHCTTCCSEECHHHHHHHH-H-H--TTCC------CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHH-c-C--CCCC------HHHHHHHHHHHhcCCCCCEEeHHHHHHHHHH
Confidence 34567888999999999999999999998 2 2 1222 345778 999999999999999999988753
No 139
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.27 E-value=9.9e-12 Score=127.91 Aligned_cols=126 Identities=10% Similarity=0.045 Sum_probs=101.7
Q ss_pred chHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHH
Q 042007 98 ENDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQ 177 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~ 177 (844)
..++++++.+.|+. ++||.|+.+||..++... ....++|+.++ .|+||.|+.+||..++..++....++.++
T Consensus 85 ~~~~~~~l~~~~D~-d~dg~I~~~EF~~~~~~~---~~l~~~F~~~D----~d~~G~I~~~El~~~l~~~g~~~~~~~~~ 156 (220)
T 3sjs_A 85 SPQTALRMMRIFDT-DFNGHISFYEFMAMYKFM---ELAYNLFVMNA----RARSGTLEPHEILPALQQLGFYINQRTSL 156 (220)
T ss_dssp CHHHHHHHHHHHCT-TCSSCBCHHHHHHHHHHH---HHHHHHHHHHC----CSSTTEECHHHHHHHHHHHTCCCCHHHHH
T ss_pred CHHHHHHHHHHhCC-CCCCcCCHHHHHHHHHHH---HHHHHHHHHHC----CCCCCCCcHHHHHHHHHHhCCCCCHHHHH
Confidence 34566666666654 589999999999887432 34677788665 57799999999999999988778888999
Q ss_pred HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHh-CCCCCC------ceeHHHHHHHHHc
Q 042007 178 IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKL-DPDCKG------YIEMWQLEILLRG 246 (844)
Q Consensus 178 ~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~-D~d~dG------~It~~EF~~ll~~ 246 (844)
.+|+.+| |+||+|+.+||.+++.... .+..+|+++ |.+++| .|+++||..++..
T Consensus 157 ~l~~~~d-d~dg~I~~~eF~~~~~~l~--------------~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 157 LLHRLFA-RGMAFCDLNCWIAICAFAA--------------QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHC---CCSEEHHHHHHHHHHHH--------------HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCCCcCcHHHHHHHHHHHH--------------HHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 9999999 9999999999999885421 356799999 999999 8899999998864
No 140
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.23 E-value=1e-11 Score=153.87 Aligned_cols=128 Identities=14% Similarity=0.181 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHccc-CCCCcCHHHHhhccCC-----------CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh
Q 042007 100 DAWRSIERRFQQFA-VSGRLPKDKFGICVGM-----------GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM 167 (844)
Q Consensus 100 ~~~~~l~~~F~~ld-~dG~is~~eF~~~lg~-----------~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~ 167 (844)
++.+++++.|+.+| +||.|+.+||+.+|.. ..+...+.++++.++ .|+||.|+|+||+.++..+
T Consensus 531 e~~~~l~~~F~~~D~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D----~d~~G~I~~~EF~~~~~~~ 606 (900)
T 1qxp_A 531 EIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMD----RDGNGKLGLVEFNILWNRI 606 (900)
T ss_dssp ----------CCCCCSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHC----C--CCCCCSSSHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHH
Confidence 44778899999988 8999999999999843 345667888888665 5779999999999999765
Q ss_pred ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 168 TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 168 ~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
++++.+|+.||+|+||+|+.+||+.++..... . ..++.++.+|+.+| |+||.|+|+||..+|..
T Consensus 607 ------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~--~------l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 607 ------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGF--K------LPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp ------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTE--E------CCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred ------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCC--C------CCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 78999999999999999999999999975432 1 23567889999999 99999999999988864
No 141
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.22 E-value=3.4e-11 Score=118.45 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
..+++++.+.++. +++|.|+.+||...+.. .....++|+.++ .|++|.|+.+||..++..+.....++.++.
T Consensus 46 ~~~~~~l~~~~D~-~~~g~i~~~eF~~~~~~---~~~~~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~ 117 (173)
T 1alv_A 46 IDTCRSMVAVMDS-DTTGKLGFEEFKYLWNN---IKKWQAIYKQFD----VDRSGTIGSSELPGAFEAAGFHLNEHLYSM 117 (173)
T ss_dssp HHHHHHHHHHHCT-TCSSSBCHHHHHHHHHH---HHHHHHHHHHHC----TTCCSSBCTTTHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCCccCHHHHHHHHHH---HHHHHHHHHHHC----CCCCCCCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 4556666666654 58999999999887742 245677888655 577999999999999998887778899999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+|+.+| |+||.|+.+||..++.. .+.+..+|+.+|.|++|+||.+ |.+.|.
T Consensus 118 ~~~~~d-d~dg~i~~~eF~~~~~~--------------~~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 118 IIRRYS-DEGGNMDFDNFISCLVR--------------LDAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp HHHHHT-CSSSCBCHHHHHHHHHH--------------HHHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred HHHHhc-CCCCcCcHHHHHHHHHH--------------HHHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 999999 99999999999998853 1456789999999999999977 666553
No 142
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.22 E-value=4.6e-11 Score=119.14 Aligned_cols=121 Identities=12% Similarity=0.162 Sum_probs=97.5
Q ss_pred CCCCcCHHHHhhccCC-CCCHHHHHHHHHHHhcccCCC-CCCceeHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCCCc
Q 042007 114 VSGRLPKDKFGICVGM-GESTEFSVGVFEALARRRKVN-TENGITKEEVRMFWEDMTK-KDLDARLQIFFDMCDKNGDGI 190 (844)
Q Consensus 114 ~dG~is~~eF~~~lg~-~~~~~~~~~lf~~l~~~~~~d-~dG~I~f~EF~~~l~~~~~-~~~~~~l~~~F~~fD~d~dG~ 190 (844)
.+|.|+.+++..+... ..+...+.++|+.++ .| ++|.|+++||..++..+.. ...++.++.+|+.+|.|+||+
T Consensus 4 ~~~~l~~~el~~~~~~~~~~~~el~~~f~~~D----~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~ 79 (190)
T 2l2e_A 4 SQSKLSQDQLQDLVRSTRFDKKELQQWYKGFF----KDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGY 79 (190)
T ss_dssp SSCCSCHHHHHHHHHHHCSCSHHHHHHHHHHH----HHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTC
T ss_pred ccccCCHHHHHHHHHhcCCCHHHHHHHHHHHH----HhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCe
Confidence 4688898888766521 224456888899776 35 5999999999999988743 467789999999999999999
Q ss_pred ccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 191 LTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 191 It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
|+.+||..++..... ...++.+..+|+.+|.|++|+|+++||..++..
T Consensus 80 i~~~ef~~~~~~~~~--------~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 80 IDFKEFICALSVTSR--------GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp EEHHHHHHHHTTSSC--------SCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHcC--------CCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 999999998854221 224667888999999999999999999999875
No 143
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.22 E-value=1.1e-11 Score=153.30 Aligned_cols=129 Identities=16% Similarity=0.272 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLD 173 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~ 173 (844)
+...++.+.|+.+| +||.|+.+||..++ |...+...+..+|..++ .|+||.|+|+||+.++.... ....+
T Consensus 722 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D----~d~dG~I~~~EF~~~~~~~~~~~~~~ 797 (863)
T 1sjj_A 722 EQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVD----PNRMGVVTFQAFIDFMSRETADTDTA 797 (863)
T ss_dssp HHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHC----TTSCSEEETTHHHHTHHHHSTTCSSS
T ss_pred HHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHHhcCCCCH
Confidence 45677888888888 89999999999887 66666677888888665 57899999999999997654 34567
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCC-----CCCceeHHHHHHHHHcCC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPD-----CKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d-----~dG~It~~EF~~ll~~~~ 248 (844)
+.++.+|+.| .|+||+||.+||+.++. ++.++.+|+.+|.| +||.|+|+||..+|...|
T Consensus 798 ~~l~~aF~~~-~d~~G~Is~~El~~~l~---------------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~~ 861 (863)
T 1sjj_A 798 DQVMASFKIL-AGDKNYITVDELRRELP---------------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGES 861 (863)
T ss_dssp HHHHHHHHGG-GTSSSEEEHHHHHHHSC---------------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCCS
T ss_pred HHHHHHHHHH-hCCCCcCcHHHHHHHCC---------------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcCC
Confidence 8899999999 89999999999999872 45678899999987 799999999999998765
No 144
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.22 E-value=2.1e-11 Score=147.13 Aligned_cols=163 Identities=10% Similarity=0.154 Sum_probs=100.7
Q ss_pred chhhhhhhhhhhhhhccCCC--chHHHHHHHHHHH--ccc--CCCCcCHHHHhhccCCCCCHHHHHHHHHHHhc---ccC
Q 042007 78 SSAARGLQSLRFLDRTVTGK--ENDAWRSIERRFQ--QFA--VSGRLPKDKFGICVGMGESTEFSVGVFEALAR---RRK 148 (844)
Q Consensus 78 s~a~~~l~~l~~i~~~~~~~--~~~~~~~l~~~F~--~ld--~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~---~~~ 148 (844)
..+..=..+|+.+.. +.. ....-..+++.|. .+| +||+|+.+|+..+|.. .+..++++++.++. +.+
T Consensus 121 ~ea~~Wv~GL~~L~~--~~~~~~~~~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~--~~~ev~~li~~~d~~~~~~D 196 (799)
T 2zkm_X 121 NVGKAWAEDVLALVK--HPLTANASRSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA--DRKRVEAALSACHLPKGKND 196 (799)
T ss_dssp SHHHHHHHHHHHHHH--CTTGGGCCHHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS--CHHHHHHHHHHTTCCCCTTC
T ss_pred HHHHHHHHHHHHHHH--HHHhccccHHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh--hHHHHHHHHHHhCcCccccc
Confidence 344444566766655 211 0112233555565 344 8999999999999865 34567777776651 222
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccc--ccchHHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNL--KENSSTYAALIMEK 226 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~--~~~~~e~~~~if~~ 226 (844)
.|++|.|+|+||+.++..+.. +++++.+|+.||+|++|+||.+||+++|........++++ ....++.++.||++
T Consensus 197 ~d~~g~idf~EF~~~~~~l~~---r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~ 273 (799)
T 2zkm_X 197 AINPEDFPEPVYKSFLMSLCP---RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDK 273 (799)
T ss_dssp EECGGGCCHHHHHHHHHHHSC---CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHHccC---HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHH
Confidence 467899999999999987753 4789999999999999999999999999754222211100 01235678899999
Q ss_pred hCCC----CCCceeHHHHHHHHHcC
Q 042007 227 LDPD----CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 227 ~D~d----~dG~It~~EF~~ll~~~ 247 (844)
+|.| +||.|+|+||..+|...
T Consensus 274 ~d~d~~~~~dg~is~eeF~~~L~S~ 298 (799)
T 2zkm_X 274 YEPSGINAQRGQLSPEGMVWFLCGP 298 (799)
T ss_dssp HCCC--------CCHHHHHHHHHST
T ss_pred hhcccccccCCccchhhhhhcccCc
Confidence 9999 89999999999999864
No 145
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.19 E-value=9.3e-11 Score=116.13 Aligned_cols=118 Identities=8% Similarity=0.138 Sum_probs=91.0
Q ss_pred CHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccC-ChHHHHHHHHHHhccCCCCcccHHHH
Q 042007 119 PKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKK-DLDARLQIFFDMCDKNGDGILTEDEV 196 (844)
Q Consensus 119 s~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~-~~~~~l~~~F~~fD~d~dG~It~eEl 196 (844)
+.+|+..+.. ..-+...+.++++.++.. |++|.|+++||..++..+... ..++.++.+|+.+|.|+||.|+.+||
T Consensus 2 ~~~el~~l~~~~~~s~~~i~~l~~~fd~~---d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 2 RPEGLEQLEAQTNFTKRELQVLYRGFKNE---XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp ----CHHHHHHSSCCHHHHHHHHHHHHHH---CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred ChHHHHHHHHhcCCCHHHHHHHHHHHHHh---CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 4455555441 122455677888866642 569999999999999987654 67889999999999999999999999
Q ss_pred HHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 197 REVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 197 ~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++..... ...++.+..+|+.+|.|++|+|+++||..++...
T Consensus 79 ~~~~~~~~~--------~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~ 121 (183)
T 1s6c_A 79 VTALSILLR--------GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121 (183)
T ss_dssp HHHHHHHHH--------CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHcC--------CCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 999864332 2245678899999999999999999999999754
No 146
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.19 E-value=7e-11 Score=116.97 Aligned_cols=123 Identities=16% Similarity=0.125 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh----ccCChHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM----TKKDLDA 174 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~----~~~~~~~ 174 (844)
.++.+++.+.|+. +++|+|+.+||..++.. .....++|+.++ ++ +|.|+.+||..++..+ .....++
T Consensus 45 ~~~~~~l~~~~D~-d~~G~I~f~EF~~~~~~---~~~l~~aF~~fD--d~---~G~I~~~El~~~l~~l~~~~G~~~~~~ 115 (174)
T 2i7a_A 45 LDECRSLVALMEL-KVNGRLDQEEFARLWKR---LVHYQHVFQKVQ--TS---PGVLLSSDLWKAIENTDFLRGIFISRE 115 (174)
T ss_dssp HHHHHHHHHHHCS-SCSSEECHHHHHHHHHH---HHHHHHHHHHHC--SB---TTBEEGGGHHHHHHTCGGGTTCCCCHH
T ss_pred HHHHHHHHHHHCC-CCCCcCCHHHHHHHHHH---HHHHHHHHHHhc--CC---CCcCCHHHHHHHHHHhHhccCCCCCHH
Confidence 3455555555554 48999999999887632 234667788443 44 9999999999999988 6667788
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCC-ceeHHHHHHHHH
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKG-YIEMWQLEILLR 245 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG-~It~~EF~~ll~ 245 (844)
.++.+++.+| |+||+|+.+||.+++... +.+..+|+.+|+|++| .++++||..++.
T Consensus 116 ~~~~l~~~~d-d~dG~I~~~EF~~~~~~~--------------~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 116 LLHLVTLRYS-DSVGRVSFPSLVCFLMRL--------------EAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHHHHS-CTTSEECHHHHHHHHHHH--------------HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCeEcHHHHHHHHHHH--------------HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 9999999999 999999999999988431 3467899999999999 349999988764
No 147
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.18 E-value=3.1e-12 Score=115.75 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc-ccc
Q 042007 130 GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS-ENK 208 (844)
Q Consensus 130 ~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~-~~~ 208 (844)
..++..++++++. .|++|.|+|+||+.++.. .....++++.+|+.||+|++|+|+.+||+.++..... ...
T Consensus 5 ~~~~~e~~~l~~~------~d~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2kyc_A 5 ILSPSDIAAALRD------CQAPDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARV 76 (108)
T ss_dssp SSCHHHHHHHHTT------SCSTTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCC
T ss_pred cCCHHHHHHHHHH------cCCCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCC
Confidence 3444555555553 235899999999998842 2345678999999999999999999999999976421 112
Q ss_pred ccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 209 LSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 209 l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
++ ++.++.+|+++|.|++|.|+|+||..+|.
T Consensus 77 ~~------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 77 LT------ASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CC------TTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CC------HHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 22 34477899999999999999999999885
No 148
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.18 E-value=9.5e-11 Score=116.70 Aligned_cols=122 Identities=13% Similarity=0.180 Sum_probs=98.5
Q ss_pred CCCCcCHHHHhhccCC-CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCCCcc
Q 042007 114 VSGRLPKDKFGICVGM-GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KDLDARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 114 ~dG~is~~eF~~~lg~-~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~~~~~l~~~F~~fD~d~dG~I 191 (844)
+.++|+.+++..+... ..+...+.++|+.++.. ++||.|+++||..++..+.. ...++.++.+|+.+|.|+||+|
T Consensus 4 ~~~~l~~~~l~~l~~~~~~~~~~i~~~~~~fd~~---~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i 80 (190)
T 1fpw_A 4 KTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRD---CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80 (190)
T ss_dssp CSCCSTTHHHHHHTTTCCSTHHHHHHHHHHHHHH---CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred ccCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH---CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence 4678888888887743 34566788899977642 36999999999999988742 3556779999999999999999
Q ss_pred cHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 192 TEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 192 t~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.+||..++...... ..++.+..+|+.+|.|++|+|+++||..++..
T Consensus 81 ~~~ef~~~~~~~~~~--------~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~ 127 (190)
T 1fpw_A 81 HFEEFITVLSTTSRG--------TLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127 (190)
T ss_dssp CHHHHHHHHHHHSCC--------CSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred eHHHHHHHHHHHccC--------CcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 999999998654321 23456788999999999999999999999976
No 149
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.16 E-value=1.1e-10 Score=113.60 Aligned_cols=122 Identities=12% Similarity=0.063 Sum_probs=98.8
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
..+++++.+.++. +++|.|+.+||..++.. .....++|+.++ .|++|.|+.+||..++..+.....++.++.
T Consensus 39 ~~~~~~l~~~~D~-~~~g~i~~~eF~~~~~~---~~~~~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~ 110 (165)
T 1k94_A 39 LETCRIMIAMLDR-DHTGKMGFNAFKELWAA---LNAWKENFMTVD----QDGSGTVEHHELRQAIGLMGYRLSPQTLTT 110 (165)
T ss_dssp HHHHHHHHHHHCT-TCSSCBCHHHHHHHHHH---HHHHHHHHHHHC----TTCCSBCCHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCcCCHHHHHHHHHH---HHHHHHHHHHhC----CCCCceECHHHHHHHHHHhCCCCCHHHHHH
Confidence 4556666666654 58999999999887743 245677888655 577999999999999998877778889999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+|+.+ |+||+|+.+||.+++... +.+..+|+.+|.|++|+|+.+ |+++|.
T Consensus 111 ~~~~~--d~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 160 (165)
T 1k94_A 111 IVKRY--SKNGRIFFDDYVACCVKL--------------RALTDFFRKRDHLQQGSANFI-YDDFLQ 160 (165)
T ss_dssp HHHHH--CBTTBCBHHHHHHHHHHH--------------HHHHHHHHTTCTTCCSEEEEE-HHHHHH
T ss_pred HHHHh--CCCCeEcHHHHHHHHHHH--------------HHHHHHHHHhCCCCCCeEeee-HHHHHH
Confidence 99999 899999999999988532 356789999999999999887 777664
No 150
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.16 E-value=2.5e-10 Score=113.67 Aligned_cols=121 Identities=11% Similarity=0.131 Sum_probs=97.4
Q ss_pred CCCcCHHHHhhccCC-CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHHHHHHHHhccCCCCccc
Q 042007 115 SGRLPKDKFGICVGM-GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARLQIFFDMCDKNGDGILT 192 (844)
Q Consensus 115 dG~is~~eF~~~lg~-~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l~~~F~~fD~d~dG~It 192 (844)
.++++.+++..+... .-+.....++|+.++.. ++||.|+++||..++..+. ....++.++.+|+.+|.|+||.|+
T Consensus 5 ~~~l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~---~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~ 81 (190)
T 1g8i_A 5 NSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKD---CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE 81 (190)
T ss_dssp CCSCCHHHHHHHHHTSSSCHHHHHHHHHHHHHH---CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred cccCCHHHHHHHHHccCCCHHHHHHHHHHHHHh---CCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence 457888888776632 33566788889977632 2699999999999998773 345677899999999999999999
Q ss_pred HHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 193 EDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 193 ~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.+||..++..... ...++.+..+|+.+|.|++|+|+++||..++..
T Consensus 82 ~~ef~~~~~~~~~--------~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~ 127 (190)
T 1g8i_A 82 FSEFIQALSVTSR--------GTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127 (190)
T ss_dssp HHHHHHHHHHHHH--------CCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC--------CCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHH
Confidence 9999999865332 124567888999999999999999999999976
No 151
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.15 E-value=1.4e-10 Score=113.22 Aligned_cols=121 Identities=11% Similarity=0.080 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
.++++++.+.++. +++|.|+.+||...+.. .....++|+.++ .|++|.|+.+||..++..+.....++.++.
T Consensus 41 ~~~~~~l~~~~D~-~~~g~i~~~eF~~~~~~---~~~~~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~ 112 (167)
T 1gjy_A 41 LETCRLMVSMLDR-DMSGTMGFNEFKELWAV---LNGWRQHFISFD----SDRSGTVDPQELQKALTTMGFRLNPQTVNS 112 (167)
T ss_dssp HHHHHHHHHHHCT-TCCSCBCHHHHHHHHHH---HHHHHHHHHHHC----TTCCSEECHHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHCC-CCCCcCCHHHHHHHHHH---HHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 4556666666654 58999999999887742 245677788655 577999999999999998877778889999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
+|+.+ |+||.|+.+||.+++... +.+..+|+.+|.|++|+|+.+ |.++|
T Consensus 113 ~~~~~--d~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~~G~i~~~-~~~~l 161 (167)
T 1gjy_A 113 IAKRY--STSGKITFDDYIACCVKL--------------RALTDSFRRRDSAQQGMVNFS-YDDFI 161 (167)
T ss_dssp HHHHT--CBTTBEEHHHHHHHHHHH--------------HHHHHHHHHHCTTCCSEEEEE-HHHHH
T ss_pred HHHHh--CcCCcCcHHHHHHHHHHH--------------HHHHHHHHHhCCCCCeeEEee-HHHHH
Confidence 99999 899999999999988532 346689999999999999976 55544
No 152
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.14 E-value=1.4e-10 Score=107.74 Aligned_cols=103 Identities=17% Similarity=0.311 Sum_probs=84.3
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+++||..++..+.....++.++.+|+.+|.|++|+|+.+||..++..... ... ..
T Consensus 2 l~~~F~~~D----~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~-~~~----~~ 72 (134)
T 1jfj_A 2 AEALFKEID----VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQG-QDL----SD 72 (134)
T ss_dssp HHHHHHHHC----TTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSC-CSS----HH
T ss_pred HHHHHHHHC----CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcc-ccc----CC
Confidence 356788666 577999999999999998887788999999999999999999999999988842111 111 11
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..+.+..+|+.+|.|++|+|+++||..++...
T Consensus 73 ~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence 34458899999999999999999999999754
No 153
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.13 E-value=3.7e-10 Score=106.68 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=87.0
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|..++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|++|.|+.+||..++..... ..
T Consensus 7 ~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-------~~ 75 (142)
T 2bl0_C 7 EFKEAFELFD----SERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMK-------QT 75 (142)
T ss_dssp HHHHHHHHHC----TTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHT-------TC
T ss_pred HHHHHHHHhC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhc-------CC
Confidence 3566777555 578999999999999998887788899999999999999999999999999864322 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 76 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 109 (142)
T 2bl0_C 76 TSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG 109 (142)
T ss_dssp CCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSS
T ss_pred ChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 2456788999999999999999999999998663
No 154
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.12 E-value=2.9e-10 Score=112.15 Aligned_cols=109 Identities=11% Similarity=0.157 Sum_probs=84.0
Q ss_pred HHHHHHHHH-hcccCCCCCCceeHHHHHHHHHHhc----cCChHHHHH-----------HHHHHhccCCCCcccHHHHHH
Q 042007 135 FSVGVFEAL-ARRRKVNTENGITKEEVRMFWEDMT----KKDLDARLQ-----------IFFDMCDKNGDGILTEDEVRE 198 (844)
Q Consensus 135 ~~~~lf~~l-~~~~~~d~dG~I~f~EF~~~l~~~~----~~~~~~~l~-----------~~F~~fD~d~dG~It~eEl~~ 198 (844)
...++|+.+ + .|+||.|+++||..++..+. ....++.++ .+|+.+|.|+||+|+.+||..
T Consensus 9 ~l~~~F~~~~D----~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 84 (185)
T 2sas_A 9 KIKFTFDFFLD----MNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLA 84 (185)
T ss_dssp HHHHHHHHHTC----TTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred HHHHHHHHhee----CCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHH
Confidence 456677766 4 57899999999999998776 444444444 449999999999999999999
Q ss_pred HHHhhhcc-ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 199 VIVLSASE-NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 199 il~~~~~~-~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
++...... ......++..++.+..+|+.+|.|+||+|+++||..++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~ 134 (185)
T 2sas_A 85 MWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF 134 (185)
T ss_dssp HHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS
T ss_pred HHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHh
Confidence 98654322 11222234466889999999999999999999999999654
No 155
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.12 E-value=3.2e-10 Score=113.19 Aligned_cols=123 Identities=14% Similarity=0.186 Sum_probs=96.5
Q ss_pred CCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCCCcc
Q 042007 114 VSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KDLDARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 114 ~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~~~~~l~~~F~~fD~d~dG~I 191 (844)
..++++.+++..+.. ..-+...+.++|+.++. + +++|.|+++||..++..+.. ...++.++.+|+.+|.|++|.|
T Consensus 4 ~~s~l~~~~l~~l~~~~~~~~~~i~~~f~~fd~-~--~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i 80 (193)
T 1bjf_A 4 QNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLR-D--CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80 (193)
T ss_dssp -CCCCCHHHHHHHHHHSSCCHHHHHHHHHHHHH-H--STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEE
T ss_pred ccccCCHHHHHHHHHHcCCCHHHHHHHHHHHHH-H--CCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcC
Confidence 356788888776552 22345667888987763 2 26999999999999987654 3457789999999999999999
Q ss_pred cHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 192 TEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 192 t~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.+||..++..... ...++.+..+|+.+|.|++|+|+++||..++...
T Consensus 81 ~~~Ef~~~~~~~~~--------~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~ 128 (193)
T 1bjf_A 81 DFREFIIALSVTSR--------GKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128 (193)
T ss_dssp EHHHHHHHHHHHTS--------SCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcC--------CCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence 99999999865322 2245678899999999999999999999999753
No 156
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.12 E-value=2.6e-10 Score=117.54 Aligned_cols=123 Identities=7% Similarity=0.100 Sum_probs=93.4
Q ss_pred CCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCCCcc
Q 042007 114 VSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KDLDARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 114 ~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~~~~~l~~~F~~fD~d~dG~I 191 (844)
..++++.+++.++.. ...+...+.++|+.++.. |+||.|+++||..++..+.. ...++.++.+|+.+|.|+||+|
T Consensus 30 ~~~~l~~~~l~~l~~~~~~s~~ei~~l~~~Fd~~---d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I 106 (224)
T 1s1e_A 30 TMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNE---CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 106 (224)
T ss_dssp --------CHHHHHHHSSCCHHHHHHHHHHHHHH---CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCB
T ss_pred CccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhh---CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcE
Confidence 467788887776652 223566788888877742 46999999999999988764 3678899999999999999999
Q ss_pred cHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 192 TEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 192 t~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.+||..++..... ...++.+..+|+.+|.|+||+|+++||..++...
T Consensus 107 ~~~Ef~~~l~~~~~--------~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 154 (224)
T 1s1e_A 107 KFEDFVTALSILLR--------GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154 (224)
T ss_dssp CHHHHHHHHHHHHH--------CCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHcc--------CCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence 99999999865332 1245678899999999999999999999999753
No 157
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.11 E-value=1.9e-10 Score=116.35 Aligned_cols=118 Identities=13% Similarity=0.144 Sum_probs=93.4
Q ss_pred CCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCC-CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHH
Q 042007 116 GRLPKDKFGICVGMGESTEFSVGVFEALARRRKVN-TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTED 194 (844)
Q Consensus 116 G~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d-~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~e 194 (844)
++++.+++.+..++ +...+.++|+.++ .| ++|.|+++||..++..+.....++.++.+|+.+|.|+||.|+.+
T Consensus 6 s~~~~~~l~~~t~~--~~~el~~~f~~~D----~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ 79 (204)
T 1jba_A 6 SWEEAEENGAVGAA--DAAQLQEWYKKFL----EECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 79 (204)
T ss_dssp SCHHHHHSSSCCHH--HHHHHHHHHHHHH----SSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHH
T ss_pred ccccHHHHHHhcCC--CHHHHHHHHHHHH----hhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHH
Confidence 34555555544333 2344677888666 45 69999999999999988777778899999999999999999999
Q ss_pred HHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 195 EVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 195 El~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
||..++..... ...++.+..+|+.+|.|++|+|+++||..++...
T Consensus 80 Ef~~~~~~~~~--------~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 80 EYVAALNLVLR--------GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp HHHHHHHHHSS--------CCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcc--------CCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999965332 1234568889999999999999999999999754
No 158
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.10 E-value=2.3e-10 Score=108.91 Aligned_cols=102 Identities=14% Similarity=0.202 Sum_probs=84.7
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..++....++.++.+|..+|.|++|.|+.+||..++..... ...
T Consensus 8 l~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-------~~~ 76 (143)
T 2obh_A 8 IREAFDLFD----ADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS-------EKD 76 (143)
T ss_dssp HHHHHHTTC----TTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHH-------HHH
T ss_pred HHHHHHHhC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhc-------ccc
Confidence 455666444 578999999999999999887778889999999999999999999999988854221 122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 77 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 109 (143)
T 2obh_A 77 TKEEILKAFKLFDDDETGKISFKNLKRVAKELG 109 (143)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 346688899999999999999999999998653
No 159
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.10 E-value=3.5e-10 Score=114.50 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=83.6
Q ss_pred cCCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCC--CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCC
Q 042007 113 AVSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVN--TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDG 189 (844)
Q Consensus 113 d~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d--~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG 189 (844)
|++|.|+.+|+..+.. ..-+.....++.+.+...| .| +||.|+++||..++.. .....+..++.+|+.+|.|+||
T Consensus 12 ~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D-~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g 89 (207)
T 2ehb_A 12 NAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLS-SSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNG 89 (207)
T ss_dssp ---------CHHHHHHHSSCCHHHHHHHHHHHHHHT-TSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSS
T ss_pred ccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-cccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCC
Confidence 4578888888877652 1122333444433333222 46 8999999999999875 2233345678899999999999
Q ss_pred cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 190 ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 190 ~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
+|+.+||..++..... ....++.+..+|+.+|.|++|+|+.+||..++.
T Consensus 90 ~i~~~Ef~~~~~~~~~-------~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 90 VIEFGEFVRSLGVFHP-------SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp EECHHHHHHHHGGGST-------TSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred eEeHHHHHHHHHHHcc-------CCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999998854321 123466788999999999999999999999985
No 160
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.09 E-value=5.8e-10 Score=106.47 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=84.7
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|++|.|+.+||..++..... ...
T Consensus 12 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-------~~~ 80 (148)
T 1exr_A 12 FKEAFALFD----KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMK-------EQD 80 (148)
T ss_dssp HHHHHHHHC----TTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH-------HHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhccc-------CCC
Confidence 455676554 578999999999999998887778889999999999999999999999988854221 112
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 81 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 113 (148)
T 1exr_A 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113 (148)
T ss_dssp HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 356678899999999999999999999998664
No 161
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.08 E-value=5.9e-10 Score=108.60 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=86.6
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.++ .|+||.|+.+||..++..+.....++.+..+|+.+|.|+||.|+.+||..++..... ..
T Consensus 29 ~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~-------~~ 97 (169)
T 3qrx_A 29 EIREAFDLFD----TDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMG-------ER 97 (169)
T ss_dssp HHHHHHHHHC----TTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHhC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhc-------cc
Confidence 3556677555 578999999999999998887788899999999999999999999999999864322 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 98 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 131 (169)
T 3qrx_A 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELG 131 (169)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 2356678899999999999999999999998664
No 162
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.08 E-value=3.9e-10 Score=113.53 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=96.7
Q ss_pred chHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHH
Q 042007 98 ENDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQ 177 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~ 177 (844)
..++++++.+.++. +++|.|+.+||...+.. .....++|+.++ .|+||.|+.+||..++..+.....++.++
T Consensus 71 ~~~~~~~l~~~~D~-d~~g~i~~~eF~~~~~~---~~~~~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~~~~ 142 (198)
T 1juo_A 71 NLETCRLMVSMLDR-DMSGTMGFNEFKELWAV---LNGWRQHFISFD----TDRSGTVDPQELQKALTTMGFRLSPQAVN 142 (198)
T ss_dssp CHHHHHHHHHHHCT-TCSSCEEHHHHHHHHHH---HHHHHHHHHTTC----TTCCSEECHHHHHHHHHHTTCCCCHHHHH
T ss_pred CHHHHHHHHHHhCC-CCCCeECHHHHHHHHHH---HHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHhCCCCCHHHHH
Confidence 34556666666654 58999999999887742 234666677444 57899999999999999887777888999
Q ss_pred HHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeH--HHHHHHH
Q 042007 178 IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEM--WQLEILL 244 (844)
Q Consensus 178 ~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~--~EF~~ll 244 (844)
.+|+.+ |+||+|+.+||.+++... +.+..+|+.+|.|++|+|+. ++|..++
T Consensus 143 ~l~~~~--d~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 143 SIAKRY--STNGKITFDDYIACCVKL--------------RALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HHHHHT--CSSSSEEHHHHHHHHHHH--------------HHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHh--CCCCeEcHHHHHHHHHHH--------------HHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 999999 899999999999988542 34668999999999999998 5555443
No 163
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.08 E-value=7.2e-10 Score=104.95 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=85.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|++|.|+.+||..++..+.....++.+..+|+.+|.|++|.|+.+||..++..... ...
T Consensus 13 l~~~F~~~D----~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~-------~~~ 81 (147)
T 4ds7_A 13 FKEAFALFD----KDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLK-------CND 81 (147)
T ss_dssp HHHHHHHHC----TTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHH-------THH
T ss_pred HHHHHHHHC----CCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhcc-------CCC
Confidence 455666544 578999999999999998887788999999999999999999999999999854322 112
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 82 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 114 (147)
T 4ds7_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcC
Confidence 356788899999999999999999999998664
No 164
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.06 E-value=1e-09 Score=105.77 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=85.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+++||..++..+.....++.++.+|+.+|.|++|.|+.+||..++..... ...
T Consensus 25 l~~~F~~~D----~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~-------~~~ 93 (161)
T 3fwb_A 25 IYEAFSLFD----MNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKIL-------KRD 93 (161)
T ss_dssp HHHHHHHHC----TTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHH-------TCC
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHh-------cCC
Confidence 455666554 578999999999999999887788899999999999999999999999998864322 122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 94 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~ 126 (161)
T 3fwb_A 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG 126 (161)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhC
Confidence 356788999999999999999999999998664
No 165
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.05 E-value=9.1e-10 Score=108.42 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=86.1
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.++ .|+||.|+.+||..++..+.....++.++.+|+.+|.|+||.|+.+||..++..... ..
T Consensus 12 ~l~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~-------~~ 80 (179)
T 2f2o_A 12 EFKEAFSLFD----KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK-------DT 80 (179)
T ss_dssp HHHHHHHHHC----TTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHcc-------Cc
Confidence 4567777555 578999999999999998887778899999999999999999999999998854321 11
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 81 ~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g 114 (179)
T 2f2o_A 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114 (179)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 2356688899999999999999999999998663
No 166
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.04 E-value=3.9e-11 Score=103.84 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=65.8
Q ss_pred CCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC
Q 042007 150 NTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP 229 (844)
Q Consensus 150 d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~ 229 (844)
|++|.|+|+|+ .+.........++++.+|+.||+|++|+|+.+||+.+++.... . ..++.++.+|+.+|.
T Consensus 1 ~~~G~i~~~e~--~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~------~~~~~~~~l~~~~d~ 70 (87)
T 1s6j_A 1 HSSGHIDDDDK--HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS--E------LMESEIKDLMDAADI 70 (87)
T ss_dssp CCSSSSSSHHH--HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTS--S------CCHHHHHHHHHHHCT
T ss_pred CCCCccCccHH--HHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCC
Confidence 46899999993 2221112233457999999999999999999999999965431 1 235678899999999
Q ss_pred CCCCceeHHHHHHHH
Q 042007 230 DCKGYIEMWQLEILL 244 (844)
Q Consensus 230 d~dG~It~~EF~~ll 244 (844)
|++|.|+|+||..++
T Consensus 71 ~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 71 DKSGTIDYGEFIAAT 85 (87)
T ss_dssp TCSSEECHHHHTTCC
T ss_pred CCCCcCcHHHHHHHH
Confidence 999999999998755
No 167
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.04 E-value=2e-10 Score=102.68 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
..++++.+|+.||+|+||+|+.+||+++++..+. .++ ++.++.+|+++|.|+||.|+|+||.++|.
T Consensus 34 ~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~--~~~------~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGY--MPN------EVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp GHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTC--CCC------TTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC--CCC------HHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 4567999999999999999999999999976542 222 34577899999999999999999999873
No 168
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.03 E-value=9.6e-10 Score=109.37 Aligned_cols=102 Identities=17% Similarity=0.200 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh-----------ccCChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q 042007 132 STEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM-----------TKKDLDARLQIFFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 132 ~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~-----------~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il 200 (844)
......++|+.++ .|+||.|+++||..++..+ .....++.+..+|+.+|.|+||.|+.+||..++
T Consensus 38 ~~~~l~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~ 113 (191)
T 3khe_A 38 ETKELTQIFRQLD----NNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVC 113 (191)
T ss_dssp TTHHHHHHHHHHC----TTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 3456777888665 5789999999999999876 444567889999999999999999999999987
Q ss_pred HhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 201 VLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 201 ~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
.... ....++.+..+|+.+|.|++|+|+.+||..++.
T Consensus 114 ~~~~--------~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 114 MDKQ--------LLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp SCHH--------HHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HHhc--------ccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 3211 223456788999999999999999999999997
No 169
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.03 E-value=9.6e-10 Score=115.62 Aligned_cols=123 Identities=7% Similarity=0.152 Sum_probs=94.4
Q ss_pred CCCCcCHHHHhhccC-CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHHHHHHHHhccCCCCcc
Q 042007 114 VSGRLPKDKFGICVG-MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 114 ~dG~is~~eF~~~lg-~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l~~~F~~fD~d~dG~I 191 (844)
..+.++.+++.++.. ...+...+.++|+.+++. ++||.|+++||..++..+. ....++.++.+|+.+|.|+||+|
T Consensus 70 ~~~~l~~e~l~~l~~~~~~s~~ei~~l~~~fd~~---~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I 146 (256)
T 2jul_A 70 STVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNE---CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAI 146 (256)
T ss_dssp ------CTHHHHHHHHTTSCHHHHHHHHHHHHHH---CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEE
T ss_pred ccccCCHHHHHHHHHHhCCCHHHHHHHHHHHHhh---CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcC
Confidence 345566667766552 223556688888877753 4699999999999998875 45677899999999999999999
Q ss_pred cHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 192 TEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 192 t~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.+||..++..... ...++.+..+|+.+|.|++|+|+++||..++...
T Consensus 147 ~~~Ef~~~l~~~~~--------~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~ 194 (256)
T 2jul_A 147 HFEDFVVGLSILLR--------GTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194 (256)
T ss_dssp CSHHHHHHHHHHHS--------CCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhc--------cChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 99999999965332 2246778899999999999999999999999753
No 170
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.01 E-value=1.4e-09 Score=98.12 Aligned_cols=94 Identities=20% Similarity=0.313 Sum_probs=78.0
Q ss_pred HHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHHH
Q 042007 104 SIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQIF 179 (844)
Q Consensus 104 ~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~~ 179 (844)
++.+.|+.+|.+|.|+.+||..++... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.+
T Consensus 10 ei~~~~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (109)
T 5pal_A 10 DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILD----KDQSGFIEEEELKGVLKGFSAHGRDLNDTETKAL 85 (109)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHTCTTCCHHHHHHHHHHHC----TTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCCcCcHHHHHHHHhhccCcHHHHHHHHHHHC----CCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 344555555569999999999988653 34557788888665 5779999999999999988 667788999999
Q ss_pred HHHhccCCCCcccHHHHHHHHH
Q 042007 180 FDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~ 201 (844)
|+.+|.|+||+|+.+||.+++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 86 LAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999885
No 171
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.01 E-value=1.3e-09 Score=105.20 Aligned_cols=104 Identities=21% Similarity=0.373 Sum_probs=85.3
Q ss_pred HHHHHHHHhcccCCCC-CCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 136 SVGVFEALARRRKVNT-ENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~-dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
..++|+.++ .|+ ||.|+.+||..++..+.....++.++.+|+.+|.|++|.|+.+||..++......+. ..
T Consensus 20 l~~~F~~~D----~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~----~~ 91 (161)
T 1dtl_A 20 FKAAFDIFV----LGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS----KG 91 (161)
T ss_dssp HHHHHHHHT----TTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHc----CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccc----cc
Confidence 455666555 688 999999999999998887778889999999999999999999999999865432100 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 92 ~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~ 124 (161)
T 1dtl_A 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124 (161)
T ss_dssp CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 345678899999999999999999999998755
No 172
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.01 E-value=8.6e-10 Score=107.93 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHH----HHHHhccCChHHHHH-----------HHHHHhccCCCCcccHHHHHHH
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRM----FWEDMTKKDLDARLQ-----------IFFDMCDKNGDGILTEDEVREV 199 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~----~l~~~~~~~~~~~l~-----------~~F~~fD~d~dG~It~eEl~~i 199 (844)
...++|+.++ .|+||.|+++||.. ++..+.....++.++ .+|+.+|.|+||.|+.+||..+
T Consensus 8 ~l~~~F~~~D----~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~ 83 (176)
T 1nya_A 8 RLKKRFDRWD----FDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRV 83 (176)
T ss_dssp HHHHHHHHCC----SSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHH
T ss_pred HHHHHHHHHc----CCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 3455666444 57899999999999 555555444444444 8999999999999999999999
Q ss_pred HHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 200 IVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 200 l~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+........-...++...+.+..+|+.+|.|++|+|+++||..++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~ 131 (176)
T 1nya_A 84 TENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL 131 (176)
T ss_dssp HHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT
T ss_pred HHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHh
Confidence 865432211000122235678899999999999999999999999765
No 173
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.01 E-value=1.3e-09 Score=110.85 Aligned_cols=120 Identities=16% Similarity=0.144 Sum_probs=89.2
Q ss_pred HHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc------cCCh
Q 042007 104 SIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT------KKDL 172 (844)
Q Consensus 104 ~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~------~~~~ 172 (844)
++.+.|+.+| ++|.|+.+||..++ +.......+..+|+.++ .|++|.|+++||..++..+. ....
T Consensus 58 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 133 (211)
T 2ggz_A 58 HIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYD----ADGNGSIDKNELLDMFMAVQALNGQQTLSP 133 (211)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHC----TTCSSSBCHHHHHHHHHHHTTSSCCCSCTH
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhc----CCCCCcCcHHHHHHHHHHHHhhcCCccccH
Confidence 3455555555 89999999999887 23333456777888655 57899999999999998774 2345
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++.++.+|+.+|.|+||+|+.+||.+++.. .+ .+..+|.. .++|+||..+|.+..
T Consensus 134 ~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~----------~~----~~~~~~~~-------~~d~~~f~~~~~~~~ 188 (211)
T 2ggz_A 134 EEFINLVFHKIDINNDGELTLEEFINGMAK----------DQ----DLLEIVYK-------SFDFSNVLRVICNGK 188 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHT----------TT----TTHHHHHH-------HSCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHh----------CH----HHHHHHhc-------cCCHHHHHHHHhcCC
Confidence 677999999999999999999999999852 11 12245552 345889999998664
No 174
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.01 E-value=1.1e-10 Score=144.43 Aligned_cols=128 Identities=13% Similarity=0.240 Sum_probs=78.9
Q ss_pred HHHHHHHHHHccc-CCCCcCHHHHhhccCC-----------CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc
Q 042007 101 AWRSIERRFQQFA-VSGRLPKDKFGICVGM-----------GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT 168 (844)
Q Consensus 101 ~~~~l~~~F~~ld-~dG~is~~eF~~~lg~-----------~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~ 168 (844)
..+++++.|..+| ++|.|+.+||++++.. ..+...++++++.++ .|+||.|+|+||..++..+
T Consensus 729 ~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D----~d~dG~Is~~EF~~l~~~~- 803 (900)
T 1qxp_A 729 EERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD----SDTTGKLGFEEFKYLWNNI- 803 (900)
T ss_dssp --------CCCCTTCSSCBCHHHHTTTSCC----CCSCC--CCCHHHHHHHHHHHC----CSSSSSBCSHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHC----CCCCCeECHHHHHHHHHHH-
Confidence 4566788898888 7999999999999843 224467888888665 5779999999999998755
Q ss_pred cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 169 KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 169 ~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+++.+|+.||+|+||+|+.+||+++++.... .++ ++.++.+|+.+| |+||.|+|+||..++...
T Consensus 804 -----~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~--~ls------~~~~~~l~~~~d-d~dg~Is~~EF~~~~~~l 868 (900)
T 1qxp_A 804 -----KKWQGIYKRFETDRSGTIGSNELPGAFEAAGF--HLN------QHIYSMIIRRYS-DETGNMDFDNFISCLVRL 868 (900)
T ss_dssp -----HHHSSCC----CCSCC-------CCTTGGGTC--CCC------SCCCC---------CCSCCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhCCCCCCccCHHHHHHHHHhcCC--CCC------HHHHHHHHHHhc-CCCCeECHHHHHHHHHHH
Confidence 37888999999999999999999999865322 222 223456888999 999999999999988754
No 175
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.01 E-value=1.2e-09 Score=103.94 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=85.3
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+.+||..++..+.....++.+..+|+.+|.|++|.|+.+||..++......... ...
T Consensus 13 l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~---~~~ 85 (153)
T 3ox6_A 13 LREAFREFD----KDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA---DMI 85 (153)
T ss_dssp HHHHHHHHH----HHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH---HHH
T ss_pred HHHHHHHhC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc---ccc
Confidence 456677655 4679999999999999988877888999999999999999999999999998543321111 112
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..+.+..+|+.+|.|++|+|+.+||..++..
T Consensus 86 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 116 (153)
T 3ox6_A 86 GVKELRDAFREFDTNGDGEISTSELREAMRA 116 (153)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2566888999999999999999999999976
No 176
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.00 E-value=1.7e-09 Score=107.83 Aligned_cols=109 Identities=14% Similarity=0.155 Sum_probs=83.5
Q ss_pred HHHHHHHHH-hcccCCCCCCceeHHHHHHHHHHh----ccCChHHHHHHHH-----------HHhccCCCCcccHHHHHH
Q 042007 135 FSVGVFEAL-ARRRKVNTENGITKEEVRMFWEDM----TKKDLDARLQIFF-----------DMCDKNGDGILTEDEVRE 198 (844)
Q Consensus 135 ~~~~lf~~l-~~~~~~d~dG~I~f~EF~~~l~~~----~~~~~~~~l~~~F-----------~~fD~d~dG~It~eEl~~ 198 (844)
...++|+.+ + .|+||.|+.+||..++..+ .....++.++.+| +.+|.|+||+|+.+||..
T Consensus 13 ~l~~~F~~~~D----~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~ 88 (191)
T 2ccm_A 13 KILRVFNTFYD----CNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLK 88 (191)
T ss_dssp HHHHHHHHHTC----TTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred HHHHhcccccc----CCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHH
Confidence 356677765 4 5789999999999999877 5455566677777 999999999999999999
Q ss_pred HHHhhhcc-ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 199 VIVLSASE-NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 199 il~~~~~~-~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
++...... ..........++.+..+|+.+|.|+||+|+++||..++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~ 138 (191)
T 2ccm_A 89 MWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY 138 (191)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTT
T ss_pred HHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 88653210 00111123346778999999999999999999999999755
No 177
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.00 E-value=1.3e-09 Score=104.45 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=86.9
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.+..+|..+|.+++|.|+.+|+...+..... +..
T Consensus 12 l~~~F~~~D----~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~-------~~~ 80 (148)
T 2lmt_A 12 FKDAFVQFD----KEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMR-------ETD 80 (148)
T ss_dssp HHHHHHHHH----CSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTT-------TTT
T ss_pred HHHHHHHHc----CCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhc-------ccC
Confidence 456788666 588999999999999999888888999999999999999999999999988854322 223
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||+.++....
T Consensus 81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g 113 (148)
T 2lmt_A 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLG 113 (148)
T ss_dssp THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcC
Confidence 456788899999999999999999999997653
No 178
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.00 E-value=1.1e-09 Score=120.37 Aligned_cols=102 Identities=19% Similarity=0.265 Sum_probs=83.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
.+++|+.+| .|+||.|+.+||..++..+.....+++++.+|+.+|.|+||.|+.+||..++..... +..
T Consensus 304 LREaF~~fD----kDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk-------~~d 372 (440)
T 3u0k_A 304 FKEAFSLFD----KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMK-------DTD 372 (440)
T ss_dssp HHHHHHHHC----TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------------
T ss_pred HHHHHHHHc----CCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc-------CCC
Confidence 456677554 588999999999999999988888999999999999999999999999988853221 122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||+.+|.+..
T Consensus 373 ~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lG 405 (440)
T 3u0k_A 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 405 (440)
T ss_dssp -CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhC
Confidence 345678899999999999999999999998654
No 179
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=98.99 E-value=1.1e-09 Score=98.86 Aligned_cols=94 Identities=20% Similarity=0.348 Sum_probs=77.7
Q ss_pred HHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHHH
Q 042007 104 SIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQIF 179 (844)
Q Consensus 104 ~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~~ 179 (844)
++.+.|+.+|++|.|+.+||..++... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.+
T Consensus 11 ei~~~~~~~D~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 86 (109)
T 3fs7_A 11 DIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILD----QDKSGFIEEEELQLFLKNFSSSARVLTSAETKAF 86 (109)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHTCTTCCHHHHHHHHHHHS----TTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHhcCCCCcCcHHHHHHHHhcCCCcHHHHHHHHHHHC----CCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHH
Confidence 345555555689999999999988543 34556788888665 5779999999999999888 566778999999
Q ss_pred HHHhccCCCCcccHHHHHHHHH
Q 042007 180 FDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~ 201 (844)
|+.+|.|+||+|+.+||.++++
T Consensus 87 ~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 87 LAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHhCCCCCCcCcHHHHHHHHh
Confidence 9999999999999999998873
No 180
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=109.70 Aligned_cols=100 Identities=18% Similarity=0.182 Sum_probs=84.2
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+++||..++..+.....++.++.+|+.+|.|+||.|+.+||..++.... ...
T Consensus 39 l~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~--------~~~ 106 (204)
T 3e3r_A 39 LARFFRQLD----RDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM--------SQA 106 (204)
T ss_dssp -CHHHHHHC----TTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC--------CHH
T ss_pred HHHHHHHHc----cCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc--------Cch
Confidence 456788665 57899999999999999888778889999999999999999999999988874211 123
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 107 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 138 (204)
T 3e3r_A 107 REAVIAAAFAKLDRSGDGVVTVDDLRGVYSGR 138 (204)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHCCCT
T ss_pred HHHHHHHHHHHhCcCCCCeEeHHHHHHHHccc
Confidence 46678899999999999999999999999643
No 181
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=98.97 E-value=2.9e-09 Score=102.35 Aligned_cols=96 Identities=14% Similarity=0.200 Sum_probs=79.1
Q ss_pred CCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC
Q 042007 150 NTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP 229 (844)
Q Consensus 150 d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~ 229 (844)
|++|.|+.+||..++..+.....++.++.+|+.+|.|++|.|+.+||..++....... .. .+...+.+..+|+.+|.
T Consensus 26 ~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~-~~--~~~~~~~~~~~F~~~D~ 102 (158)
T 2jnf_A 26 EGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE-VN--PEQMQQELREAFRLYDK 102 (158)
T ss_dssp SSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC-CC--TTTTSSTHHHHHHHHCS
T ss_pred CCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc-cc--hhhHHHHHHHHHHHhCC
Confidence 6799999999999999888777889999999999999999999999999986533211 00 00223457789999999
Q ss_pred CCCCceeHHHHHHHHHcCC
Q 042007 230 DCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 230 d~dG~It~~EF~~ll~~~~ 248 (844)
|++|+|+.+||..++....
T Consensus 103 d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 103 EGNGYISTDVMREILAELD 121 (158)
T ss_dssp SSSSSEEHHHHHHHHHHHC
T ss_pred CCCCeEcHHHHHHHHHHhC
Confidence 9999999999999998653
No 182
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=98.96 E-value=1e-09 Score=131.97 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 99 NDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
.++++++.+.|+. |++|+|+.+||..++.. .....++|+.+| .|+||.|+.+||..++..+.....++.++.
T Consensus 574 ~~~~~~l~~~~D~-d~~G~I~f~EF~~l~~~---~~~l~~~F~~~D----~d~dG~Is~~El~~~L~~~G~~ls~~~~~~ 645 (714)
T 3bow_A 574 IETCKIMVDMLDE-DGSGKLGLKEFYILWTK---IQKYQKIYREID----VDRSGTMNSYEMRKALEEAGFKLPCQLHQV 645 (714)
T ss_dssp HHHHHHHHHHHCC-SSCSSBCHHHHHHHHHH---HHHHHHHHHHHC----TTCCSSEEHHHHHHHHHHTTEECCHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHH---HHHHHHHHHHhC----CCCCCeECHHHHHHHHHHcCCCCCHHHHHH
Confidence 3445555555543 48999999999988742 245777888665 577999999999999998877778899999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+|+.+| |+||.|+.+||..++.. .+.+..+|+.+|.|++|+|+++|++.++..+
T Consensus 646 l~~~~D-d~dG~Isf~EF~~~l~~--------------~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~ 699 (714)
T 3bow_A 646 IVARFA-DDELIIDFDNFVRCLVR--------------LEILFKIFKQLDPENTGTIQLDLISWLSFSV 699 (714)
T ss_dssp HHHHHS-CTTCEECHHHHHHHHHH--------------HHHHHHHHSSSCSSCCSEEEEEHHHHHHHHH
T ss_pred HHHHhC-CCCCeEcHHHHHHHHHH--------------HHHHHHHHHHhCCCCCCcEEHHHHHHHHHHH
Confidence 999999 99999999999998853 1356679999999999999999999888655
No 183
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=98.96 E-value=1.4e-09 Score=109.17 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=82.2
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh-HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL-DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~-~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
+.++|+.++.. ++||.|+++||..++..+..... .+.++.+|+.+|.|+||+|+.+||..++..... .
T Consensus 16 l~~~f~~fd~~---~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~--------~ 84 (198)
T 2r2i_A 16 CHQWYKKFMTE---CPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK--------G 84 (198)
T ss_dssp HHHHHHHHHHH---CTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSS--------C
T ss_pred HHHHHHHHHHh---CCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHcc--------C
Confidence 46778876632 26999999999999976654333 456999999999999999999999999965332 1
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++.+..+|+.+|.|++|+|+++||..++...
T Consensus 85 ~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~ 117 (198)
T 2r2i_A 85 KVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI 117 (198)
T ss_dssp CHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 245678899999999999999999999999765
No 184
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.96 E-value=8.1e-10 Score=98.72 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhc-cCCC-CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGD-GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~d-G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
-+.++.+|+.|| +||| |+||.+||+.+++.... +-+. +...++.++.||+++|.|+||.|+|+||..+|...
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~-~~lg--~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELA-TWTP--TEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTT-TCCC--CTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhh-hhcC--CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 357899999998 8998 99999999999974221 1111 12346789999999999999999999999999754
No 185
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=98.96 E-value=1.2e-09 Score=110.16 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=73.1
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|..++ .|+||.|+++||..++..+.....++.++.+|+.+|.|+||.|+.+||..++.... ..
T Consensus 58 ~l~~~F~~~D----~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~--------~~ 125 (197)
T 3pm8_A 58 NLRNIFIALD----VDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQ--------TY 125 (197)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHH--------HH
T ss_pred HHHHHHHHHC----CCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHH--------hh
Confidence 3456677555 57899999999999999887667788999999999999999999999987763211 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 126 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 126 LKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp CSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred hhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 246678899999999999999999999999765
No 186
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=98.95 E-value=3.9e-09 Score=101.72 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=84.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|++|.|+.+||..++........ ...
T Consensus 22 l~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~----~~~ 93 (162)
T 1top_A 22 FKAAFDMFD----ADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA----KGK 93 (162)
T ss_dssp HHHHHHTTT----CSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHC----CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccc----ccc
Confidence 444555433 578999999999999998877778899999999999999999999999998864322110 111
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 94 ~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g 126 (162)
T 1top_A 94 SEEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC
Confidence 456688999999999999999999999998664
No 187
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=98.95 E-value=1e-09 Score=104.35 Aligned_cols=106 Identities=13% Similarity=0.206 Sum_probs=82.5
Q ss_pred HHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHh-ccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 137 VGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMC-DKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 137 ~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~f-D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
.++|..++ .|++|.|+.+||..++..+.....++.++.+|+.+ |.|++|.|+.+||..++........ .....
T Consensus 7 ~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~--~~~~~ 80 (148)
T 1m45_A 7 KDIFTLFD----KKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELD--ATTKA 80 (148)
T ss_dssp TTCHHHHC----TTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHH--GGGCC
T ss_pred HHHHHHHC----CCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcc--ccccc
Confidence 34677555 57799999999999999988777889999999999 9999999999999999865311000 00122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 81 ~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 113 (148)
T 1m45_A 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG 113 (148)
T ss_dssp CTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHST
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC
Confidence 356688899999999999999999999998763
No 188
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=98.95 E-value=2.8e-09 Score=109.72 Aligned_cols=98 Identities=18% Similarity=0.248 Sum_probs=78.1
Q ss_pred HHHHHHHHhcccCCC--CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccc
Q 042007 136 SVGVFEALARRRKVN--TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLK 213 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d--~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~ 213 (844)
..++|+.++ .| +||.|+.+||..++.. .....+..++.+|+.+|.|+||+|+.+||..++..... .
T Consensus 50 l~~~F~~~D----~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~-------~ 117 (226)
T 2zfd_A 50 LYELFKKIS----SAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHP-------N 117 (226)
T ss_dssp HHHHHHHHH----TSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST-------T
T ss_pred HHHHHHHhC----cccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHcc-------C
Confidence 445566555 46 8999999999999875 22334456788999999999999999999998864321 1
Q ss_pred cchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 214 ENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 214 ~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
...++.+..+|+.+|.|++|+|+.+||..++.
T Consensus 118 ~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~ 149 (226)
T 2zfd_A 118 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVV 149 (226)
T ss_dssp SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 23466788999999999999999999999995
No 189
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=98.94 E-value=2.6e-09 Score=96.29 Aligned_cols=95 Identities=19% Similarity=0.316 Sum_probs=79.0
Q ss_pred HHHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHH
Q 042007 103 RSIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQI 178 (844)
Q Consensus 103 ~~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~ 178 (844)
+++.+.|..+|++|.|+.+||...+... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.
T Consensus 9 ~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 84 (109)
T 1rwy_A 9 EDIKKAIGAFTAADSFDHKKFFQMVGLKKKSADDVKKVFHILD----KDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84 (109)
T ss_dssp HHHHHHHHTTCSTTCCCHHHHHHHHTGGGSCHHHHHHHHHHHS----TTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHH
T ss_pred HHHHHHHHHcCCCCcEeHHHHHHHHhcCcchHHHHHHHHHHHC----CCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 3456666666789999999999888543 34556788888665 5779999999999999988 55677889999
Q ss_pred HHHHhccCCCCcccHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+|+.+|.|+||+|+.+||.+++.
T Consensus 85 ~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 85 LMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHCCCCCCcCCHHHHHHHHH
Confidence 99999999999999999998874
No 190
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.7e-09 Score=107.16 Aligned_cols=103 Identities=13% Similarity=0.157 Sum_probs=86.4
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.+| .|+||.|+.+||..++..+.....++.+..++..+|.|++|.|+.+||..++..... ..
T Consensus 12 elk~~F~~~D----~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~-------~~ 80 (176)
T 2lhi_A 12 EFKEAFALFD----KDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK-------SN 80 (176)
T ss_dssp HHHHHHHTTC----SSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCC-------SS
T ss_pred HHHHHHHHHC----CCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcc-------cC
Confidence 3566777554 578999999999999999988888999999999999999999999999887743211 22
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..++.+..+|+.+|.|++|+|+.+||+.+|....
T Consensus 81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 114 (176)
T 2lhi_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114 (176)
T ss_dssp HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTT
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 2456788899999999999999999999998664
No 191
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=98.94 E-value=3.2e-09 Score=95.79 Aligned_cols=94 Identities=18% Similarity=0.302 Sum_probs=77.3
Q ss_pred HHHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHH
Q 042007 103 RSIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQI 178 (844)
Q Consensus 103 ~~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~ 178 (844)
+++.+.|..+|++|.|+.+||..++... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.
T Consensus 10 ~e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 85 (109)
T 1bu3_A 10 ADVAAALKACEAADSFNYKAFFAKVGLTAKSADDIKKAFFVID----QDKSGFIEEDELKLFLQVFSAGARALTDAETKA 85 (109)
T ss_dssp HHHHHHHHHTCSTTCCCHHHHHHHHTGGGSCHHHHHHHHHHHC----TTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHH
T ss_pred HHHHHHHHHhCCCCcCcHHHHHHHHHcChhhHHHHHHHHHHHC----CCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHH
Confidence 3345555555689999999999888543 34456788888665 5779999999999999988 56678899999
Q ss_pred HHHHhccCCCCcccHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il 200 (844)
+|+.+|.|+||+|+.+||..++
T Consensus 86 ~~~~~D~~~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 86 FLKAGDSDGDGAIGVDEWAALV 107 (109)
T ss_dssp HHHHHCTTCSSEECHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHH
Confidence 9999999999999999999877
No 192
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.93 E-value=1.8e-09 Score=95.02 Aligned_cols=72 Identities=18% Similarity=0.250 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhc-cCCC-CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGD-GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~d-G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +||| |+||.+||+++++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg-~~l~--~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP-SFLG--KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCG-GGC-----CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhh-hhcc--CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 467999999998 6885 89999999999974221 1121 12246789999999999999999999999998643
No 193
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=98.93 E-value=3.1e-09 Score=102.73 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=78.9
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHH----hccCChHHHHH-----------HHHHHhccCCCCcccHHHHHHH
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWED----MTKKDLDARLQ-----------IFFDMCDKNGDGILTEDEVREV 199 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~----~~~~~~~~~l~-----------~~F~~fD~d~dG~It~eEl~~i 199 (844)
...++|+.++ .|+||.|+++||..++.. +.....++.++ .+|+.+|.|+||.|+.+||..+
T Consensus 5 ~l~~~F~~~D----~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~ 80 (166)
T 3akb_A 5 RIAARFTTFD----QDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTG 80 (166)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHT
T ss_pred HHHHHHhHHc----CCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 4567788665 578999999999998643 33333333333 5699999999999999999998
Q ss_pred HHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 200 IVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 200 l~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+........ ....+...+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~ 127 (166)
T 3akb_A 81 AVKRLRDKP-DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF 127 (166)
T ss_dssp HHHHHHHSH-HHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHT
T ss_pred HHHHhccCc-cchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh
Confidence 865332110 00112234558899999999999999999999999765
No 194
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.93 E-value=1.9e-09 Score=95.90 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|||| +||.+||+++++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 10 i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg-~~l~--~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 10 LAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELP-SFVG--EKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCH-HHHC--SSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhh-hhcc--CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 467999999998 89995 9999999999974211 1111 12246789999999999999999999999998744
No 195
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.92 E-value=3.5e-09 Score=93.34 Aligned_cols=72 Identities=19% Similarity=0.341 Sum_probs=61.3
Q ss_pred hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 167 MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 167 ~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.....+++++.+|+.||+|+||+|+.+||+.+++.... . ..++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 22 ~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~--~------~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGE--K------LTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp HCCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTC--C------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hcCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 445677889999999999999999999999999976432 1 23567889999999999999999999999863
No 196
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=98.92 E-value=4.2e-09 Score=104.57 Aligned_cols=108 Identities=15% Similarity=0.137 Sum_probs=79.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHH-----HHHHHhccCChHH-----HHHHHHHHhccCCCCcccHHHHHHHHHhhhc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVR-----MFWEDMTKKDLDA-----RLQIFFDMCDKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~-----~~l~~~~~~~~~~-----~l~~~F~~fD~d~dG~It~eEl~~il~~~~~ 205 (844)
..++|+.++ .|+||.|+.+||. .++..+.....++ .++.+|+.+|.|+||.|+.+||..++.....
T Consensus 18 l~~~F~~~D----~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~ 93 (191)
T 1uhk_A 18 HKHMFNFLD----VNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT 93 (191)
T ss_dssp HHHHHHHHC----TTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHhhcc----CCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhc
Confidence 456677554 5789999999999 6666665444444 6899999999999999999999998854322
Q ss_pred cc--ccccc-ccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 206 EN--KLSNL-KENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 206 ~~--~l~~~-~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.. ..... .+.....++.+|+.+|.|++|+|+.+||..++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~ 138 (191)
T 1uhk_A 94 DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAA 138 (191)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh
Confidence 11 00000 11123334589999999999999999999999764
No 197
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=98.92 E-value=4.2e-09 Score=104.28 Aligned_cols=96 Identities=19% Similarity=0.220 Sum_probs=78.9
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.++ .|+||.|+++||..++..+.. ..+.++.+|+.+|.|+||.|+.+||..++.....
T Consensus 40 ~l~~~F~~~D----~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~--------- 104 (180)
T 3mse_B 40 YINELFYKLD----TNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAGCYRWKN--------- 104 (180)
T ss_dssp HHHHHHHHHC----TTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT---------
T ss_pred HHHHHHHHhC----CCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc---------
Confidence 4566777555 588999999999999988753 3578999999999999999999999988742111
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
..++.+..+|+.+|.|++|+|+.+||..++.
T Consensus 105 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 135 (180)
T 3mse_B 105 IESTFLKAAFNKIDKDEDGYISKSDIVSLVH 135 (180)
T ss_dssp C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc
Confidence 1135678899999999999999999999997
No 198
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.92 E-value=2.1e-09 Score=96.59 Aligned_cols=72 Identities=18% Similarity=0.260 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhc-cCCC-CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGD-GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~d-G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +||| |+||.+||+++++.... +.+. ....++.++.||+++|.|+||.|+|+||..+|...
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg-~~l~--~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP-SWLG--KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCG-GGSC--SSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcc-hhcc--CCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 367999999998 7886 89999999999974221 1121 12246789999999999999999999999999754
No 199
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=98.92 E-value=3e-09 Score=103.20 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=82.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|++|.|+++||..++..+.....++.+..+|+.+|.|++|.|+.+||..++..... ..
T Consensus 29 l~~~F~~~D----~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~--------~~ 96 (166)
T 2aao_A 29 LKEMFNMID----ADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK--------IE 96 (166)
T ss_dssp HHHHHHHHC----TTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH--------HH
T ss_pred HHHHHHHhC----CCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh--------cc
Confidence 456677555 578999999999999988877777889999999999999999999999988743211 11
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 97 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 128 (166)
T 2aao_A 97 REDHLFAAFTYFDKDGSGYITPDELQQACEEF 128 (166)
T ss_dssp TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 24568889999999999999999999999755
No 200
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=98.92 E-value=2.7e-09 Score=96.12 Aligned_cols=94 Identities=20% Similarity=0.359 Sum_probs=77.3
Q ss_pred HHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHHH
Q 042007 104 SIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQIF 179 (844)
Q Consensus 104 ~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~~ 179 (844)
++.+.|..+|++|.|+.+||..++... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.+
T Consensus 10 e~~~l~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 2pvb_A 10 DVAAALAACSAADSFKHKEFFAKVGLASKSLDDVKKAFYVID----QDKSGFIEEDELKLFLQNFSPSARALTDAETKAF 85 (108)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHTGGGSCHHHHHHHHHHHC----TTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCCcCcHHHHHHHHhCChhHHHHHHHHHHHHC----CCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 445555555689999999999888543 34556788898665 5779999999999999887 556778899999
Q ss_pred HHHhccCCCCcccHHHHHHHHH
Q 042007 180 FDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~ 201 (844)
|+.+|.|+||+|+.+||..++.
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 86 LADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhCCCCCCcEeHHHHHHHHh
Confidence 9999999999999999998773
No 201
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=98.91 E-value=3.9e-09 Score=105.74 Aligned_cols=98 Identities=20% Similarity=0.168 Sum_probs=81.7
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.++ .|+||.|+.+||..++..+..... +.++.+|+.+|.|+||.|+.+||..++.... .
T Consensus 53 ~l~~~F~~~D----~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~---------~ 118 (191)
T 3k21_A 53 KLKSTFLVLD----EDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK---------Q 118 (191)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG---------G
T ss_pred HHHHHHHHHC----CCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh---------h
Confidence 4566677555 588999999999999998875555 7899999999999999999999998873211 1
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++.+..+|+.+|.|++|+|+.+||..++..
T Consensus 119 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~ 150 (191)
T 3k21_A 119 LSKKLIYCAFRVFDVDNDGEITTAELAHILYN 150 (191)
T ss_dssp CCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 23567888999999999999999999999976
No 202
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=98.90 E-value=3.4e-09 Score=101.75 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=85.3
Q ss_pred HHHHHHHHhcccCC--CCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccc
Q 042007 136 SVGVFEALARRRKV--NTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLK 213 (844)
Q Consensus 136 ~~~lf~~l~~~~~~--d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~ 213 (844)
..++|..++ . |++|.|+.+||..++..+.....++.+..+ +.+|.|++|.|+.+||..++...... .
T Consensus 11 l~~~F~~~D----~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~------~ 79 (156)
T 1wdc_C 11 LKDVFELFD----FWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC------E 79 (156)
T ss_dssp HHHHHHHHH----HHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS------C
T ss_pred HHHHHHHHc----cCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc------c
Confidence 566787666 5 679999999999999988877778889999 99999999999999999998654321 1
Q ss_pred cchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 214 ENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 214 ~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
....+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 80 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 114 (156)
T 1wdc_C 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114 (156)
T ss_dssp CCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSS
T ss_pred CChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 22356788999999999999999999999998663
No 203
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=98.90 E-value=3.5e-09 Score=119.07 Aligned_cols=124 Identities=16% Similarity=0.211 Sum_probs=95.0
Q ss_pred CCCCcCHHHHhhccCCCCCH---HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCc
Q 042007 114 VSGRLPKDKFGICVGMGEST---EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGI 190 (844)
Q Consensus 114 ~dG~is~~eF~~~lg~~~~~---~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~ 190 (844)
.+|.+...++........+. ....++|+.++ .|+||.|+.+||..++..+.....++.++.+|+.+|.|+||.
T Consensus 289 e~g~i~~~e~~~~~~~~ls~eei~el~~~F~~fD----~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~ 364 (450)
T 3sg6_A 289 EDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD----KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 364 (450)
T ss_dssp TTSTTTTTCBCCC---CCCHHHHHHHHHHHHHHC----TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSS
T ss_pred ccccchhhhhhhhhcccCCHHHHHHHHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCc
Confidence 67888877775332111122 24556676554 578999999999999999887788899999999999999999
Q ss_pred ccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 191 LTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 191 It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
|+.+||..++..... ....++.+..+|+.+|.|++|+|+.+||..+|....
T Consensus 365 IsfeEFl~ll~~~~~-------~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG 415 (450)
T 3sg6_A 365 IDFPEFLTMMARKMK-------DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415 (450)
T ss_dssp EEHHHHHHHHHC-------------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhhcc-------ccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence 999999998854221 122356788999999999999999999999998653
No 204
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=98.90 E-value=3.3e-09 Score=107.46 Aligned_cols=110 Identities=12% Similarity=0.121 Sum_probs=84.0
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc--CChHHHHHHHH-------HHhccCCCCcccHHHHHHHHHhhhc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK--KDLDARLQIFF-------DMCDKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~--~~~~~~l~~~F-------~~fD~d~dG~It~eEl~~il~~~~~ 205 (844)
...++|+.++ .|+||.|+.+||..++..+.. ...++.+..+| +.+|.|+||.|+.+||..++.....
T Consensus 37 ~l~~~F~~~D----~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~ 112 (208)
T 2hpk_A 37 RLYKRFDTFD----LDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAE 112 (208)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh
Confidence 3567788665 578999999999999988775 66677888888 9999999999999999998851000
Q ss_pred c-c--cccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 206 E-N--KLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 206 ~-~--~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
. . .+....+..++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 158 (208)
T 2hpk_A 113 AERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD 158 (208)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred hhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC
Confidence 0 0 01111222344588999999999999999999999997653
No 205
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=98.90 E-value=3.9e-09 Score=95.36 Aligned_cols=95 Identities=24% Similarity=0.394 Sum_probs=78.0
Q ss_pred HHHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHH
Q 042007 103 RSIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQI 178 (844)
Q Consensus 103 ~~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~ 178 (844)
.++.+.|..+|++|.|+.+||..++... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.
T Consensus 10 ~e~~~~~~~~d~~g~i~~~ef~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 85 (110)
T 1pva_A 10 DDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAID----ADASGFIEEEELKFVLKSFAADGRDLTDAETKA 85 (110)
T ss_dssp HHHHHHHHHTCSTTCCCHHHHHHHHTCTTSCHHHHHHHHHHHC----TTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCCcCcHHHHHHHHccCcchHHHHHHHHHHhC----CCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 3455556656689999999999988653 24456788888665 5779999999999999887 45567889999
Q ss_pred HHHHhccCCCCcccHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+|+.+|.|+||.|+.+||..++.
T Consensus 86 ~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 86 FLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHH
Confidence 99999999999999999998874
No 206
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.90 E-value=5.5e-09 Score=126.04 Aligned_cols=138 Identities=14% Similarity=0.227 Sum_probs=103.9
Q ss_pred HHHHHHc--cc--CCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcc---cCCCCCCceeHHHHHHHHHHhccCChHHHHH
Q 042007 105 IERRFQQ--FA--VSGRLPKDKFGICVGMGESTEFSVGVFEALARR---RKVNTENGITKEEVRMFWEDMTKKDLDARLQ 177 (844)
Q Consensus 105 l~~~F~~--ld--~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~---~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~ 177 (844)
+++.|.+ +| +||+|+.+|+.++|.. ....++.+++.++.. .+.+++|.|+|+||..++..+.. .++++
T Consensus 152 L~kaf~~~~~D~n~dGkIs~kel~~~l~~--~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~---R~EI~ 226 (885)
T 3ohm_B 152 LRKAYTKLKLQVNQDGRIPVKNILKMFSA--DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL---RPDID 226 (885)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHTTGG--GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---CHHHH
T ss_pred HHHHHHHhcCccCCCCccCHHHHHHHHhc--CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---HHHHH
Confidence 5555654 34 8999999999999865 234556666644421 11226889999999999998764 35799
Q ss_pred HHHHHhccCCCCcccHHHHHHHHHhhhcccccccc--ccchHHHHHHHHHHhCCC----CCCceeHHHHHHHHHcC
Q 042007 178 IFFDMCDKNGDGILTEDEVREVIVLSASENKLSNL--KENSSTYAALIMEKLDPD----CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 178 ~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~--~~~~~e~~~~if~~~D~d----~dG~It~~EF~~ll~~~ 247 (844)
.+|+.||.|++|+||.+||+++|+.......++++ ....++.+..||+++|.| ++|.|++++|..+|...
T Consensus 227 eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S~ 302 (885)
T 3ohm_B 227 KILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGGE 302 (885)
T ss_dssp HHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTST
T ss_pred HHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccCc
Confidence 99999999999999999999999764332222210 123578899999999999 89999999999999754
No 207
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.89 E-value=2e-09 Score=107.56 Aligned_cols=100 Identities=15% Similarity=0.230 Sum_probs=81.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+++||..++..+.....++.+..+|+.+|.|+||.|+.+||..++..... ..
T Consensus 12 l~~~F~~~D----~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~---~~----- 79 (188)
T 1s6i_A 12 LKELFKMID----TDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNK---LE----- 79 (188)
T ss_dssp HHHHHHTTS----SSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSS---SC-----
T ss_pred HHHHHHHHC----CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhc---cC-----
Confidence 566777554 578999999999999988877777889999999999999999999999988743211 11
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 80 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 111 (188)
T 1s6i_A 80 REENLVSAFSYFDKDGSGYITLDEIQQACKDF 111 (188)
T ss_dssp CCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc
Confidence 12346789999999999999999999998754
No 208
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.89 E-value=1.1e-09 Score=96.85 Aligned_cols=67 Identities=27% Similarity=0.279 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..++++.+|+.||+|+||+|+.+|++.+++... + .++.++.+++++|.|+||.|+|+||..+|....
T Consensus 8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g----~------~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG----L------PSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT----C------CHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC----C------CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 456899999999999999999999999996531 2 256688899999999999999999999996553
No 209
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=98.89 E-value=8.9e-09 Score=97.54 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=84.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHh---ccCCCCcccHHHHHHHHHhhhcccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMC---DKNGDGILTEDEVREVIVLSASENKLSNL 212 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~f---D~d~dG~It~eEl~~il~~~~~~~~l~~~ 212 (844)
..++|..++ .|++|.|+.+||..++..+.....++.+..+|+.+ |.|+ |.|+.+||..++..... ..
T Consensus 10 l~~~F~~~D----~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~---~~-- 79 (149)
T 2mys_C 10 FKEAFLLFD----RTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAAN---NK-- 79 (149)
T ss_pred HHHHHHHhC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhc---cC--
Confidence 456677555 57899999999999999887777888999999999 9999 99999999998865311 11
Q ss_pred ccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 213 KENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 213 ~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.....+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 80 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 115 (149)
T 2mys_C 80 DQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 115 (149)
T ss_pred CcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhC
Confidence 223456788899999999999999999999998663
No 210
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.89 E-value=3.3e-09 Score=94.74 Aligned_cols=72 Identities=18% Similarity=0.197 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhccCC---CCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNG---DGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~---dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.||+|+ +|+|+.+||+.+++.... ..++ +...++.++.||+++|.|+||.|+|+||..+|...
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~-~~l~--~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELN-HMLS--DTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHST-TTTC--SSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHcc-cccc--ccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 467999999999963 799999999999975332 1222 22236789999999999999999999999999754
No 211
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=98.89 E-value=5.2e-09 Score=104.36 Aligned_cols=108 Identities=15% Similarity=0.159 Sum_probs=75.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHH-----HHHHHhccCChHH-----HHHHHHHHhccCCCCcccHHHHHHHHHhhhc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVR-----MFWEDMTKKDLDA-----RLQIFFDMCDKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~-----~~l~~~~~~~~~~-----~l~~~F~~fD~d~dG~It~eEl~~il~~~~~ 205 (844)
..++|+.++ .|+||.|+.+||. .++..+.....++ .++.+|+.+|.|+||.|+.+||..++.....
T Consensus 22 l~~~F~~~D----~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~ 97 (195)
T 1qv0_A 22 HKHMFDFLD----INGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLAT 97 (195)
T ss_dssp HHHHHHHHC----TTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHH
T ss_pred HHHHHhHcC----CCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHh
Confidence 456677554 5789999999999 5666655443443 6899999999999999999999998854322
Q ss_pred cc--ccc-ccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 206 EN--KLS-NLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 206 ~~--~l~-~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.. ... ...+...+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 142 (195)
T 1qv0_A 98 SELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142 (195)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH
T ss_pred hhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh
Confidence 11 000 0012233455689999999999999999999999765
No 212
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=98.88 E-value=1.5e-09 Score=103.54 Aligned_cols=104 Identities=9% Similarity=0.018 Sum_probs=83.2
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccC--CCCcccHHHHHHHHHhhhccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKN--GDGILTEDEVREVIVLSASENKLSNLK 213 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d--~dG~It~eEl~~il~~~~~~~~l~~~~ 213 (844)
..++|..++ .|++|.|+.+||..++..+.....++.++.+|+.+|.| ++|.|+.+||..++....... .
T Consensus 12 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~-----~ 82 (151)
T 1w7j_B 12 FKEAFELFD----RVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR-----G 82 (151)
T ss_dssp HHHHHHHHC----CSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC-----C
Confidence 566777555 57799999999999999888777889999999999999 999999999999886532211 1
Q ss_pred cchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 214 ENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 214 ~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
....+.+..+|+.+|.|++|+|+.+||+.++....
T Consensus 83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 117 (151)
T 1w7j_B 83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLG 117 (151)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSS
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 11233456799999999999999999999998763
No 213
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.87 E-value=3.1e-09 Score=86.56 Aligned_cols=64 Identities=25% Similarity=0.300 Sum_probs=55.0
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+++.+|+.+|+|++|+|+.+|++.++..... ...++.++.+|+.+|.|++|.|+++||..++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSP--------YFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCT--------TSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--------CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 5788999999999999999999999975321 123567889999999999999999999999875
No 214
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=98.87 E-value=3.1e-09 Score=95.75 Aligned_cols=93 Identities=18% Similarity=0.353 Sum_probs=75.8
Q ss_pred HHHHHHHcccCCCCcCHHHHhhccCCC-CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHHH
Q 042007 104 SIERRFQQFAVSGRLPKDKFGICVGMG-ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQIF 179 (844)
Q Consensus 104 ~l~~~F~~ld~dG~is~~eF~~~lg~~-~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~~ 179 (844)
++.+.|..+|++|.|+.+||...+... .......++|+.++ .|++|.|+.+||..++..+ .....++.++.+
T Consensus 10 e~~~~~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~ 85 (108)
T 1rro_A 10 DIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDIFRFID----NDQSGYLDGDELKYFLQKFQSDARELTESETKSL 85 (108)
T ss_dssp HHHHHHHHTCSTTCCCHHHHHHHHSGGGSCHHHHHHHHHHHC----TTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHccCCCCcCHHHHHHHHhcCcccHHHHHHHHHHhC----CCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 445555555689999999999888543 23456778888665 5779999999999999887 445678899999
Q ss_pred HHHhccCCCCcccHHHHHHHH
Q 042007 180 FDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il 200 (844)
|+.+|.|+||+|+.+||..++
T Consensus 86 ~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 86 MDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp HHHHCCSSSSSEEHHHHHHHH
T ss_pred HHHhCCCCCCcCcHHHHHHHH
Confidence 999999999999999999876
No 215
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.86 E-value=4.1e-09 Score=88.98 Aligned_cols=67 Identities=19% Similarity=0.341 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+++++.+|+.||+|+||+|+.+|++.+++... .+ .++.++.+|+.+|.|+||.|+|+||..++...+
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g---~~------~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~ 68 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG---ST------SADEVQRMMAEIDTDGDGFIDFNEFISFCNANP 68 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH---TC------CHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHCH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC---CC------CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCc
Confidence 45789999999999999999999999997643 22 256688999999999999999999999998764
No 216
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=98.86 E-value=1.2e-08 Score=105.41 Aligned_cols=102 Identities=9% Similarity=0.171 Sum_probs=83.6
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLK 213 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~ 213 (844)
...++++.+.+ .|++|.|+.+||..++..+. ....+..++.+|+.+|.|+||+|+.+||..++.....
T Consensus 65 ei~~l~~~F~~---~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~-------- 133 (229)
T 3dd4_A 65 ELQILYRGFKN---ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR-------- 133 (229)
T ss_dssp HHHHHHHHHHT---TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHh---hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcC--------
Confidence 35556665544 46799999999999998854 4567788999999999999999999999999864332
Q ss_pred cchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 214 ENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 214 ~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...++.+..+|+.+|.|+||+|+++||..++...
T Consensus 134 ~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 167 (229)
T 3dd4_A 134 GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI 167 (229)
T ss_dssp SCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence 2245778899999999999999999999999754
No 217
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=98.85 E-value=6e-09 Score=99.58 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=76.1
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.++ .|++|.|+.+|| ..+..+... ..++.+|+.+|.|++|+|+.+||..++..... ..
T Consensus 7 ~l~~~F~~~D----~d~~G~i~~~el-~~l~~~~~~---~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~-------~~ 71 (155)
T 3ll8_B 7 RLGKRFKKLD----LDNSGSLSVEEF-MSLPELQQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSV-------KG 71 (155)
T ss_dssp HHHHHHHHHC----TTCSSSBCHHHH-TTSGGGTTC---TTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCS-------SC
T ss_pred HHHHHHHHhC----cCCCCeEcHHHH-HHhhccccc---hHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcc-------cC
Confidence 3456677555 578999999999 544444322 27888999999999999999999998853221 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++.+..+|+.+|.|++|+|+.+||..++..
T Consensus 72 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~ 103 (155)
T 3ll8_B 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKM 103 (155)
T ss_dssp CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34577889999999999999999999999976
No 218
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=98.85 E-value=4.3e-09 Score=106.04 Aligned_cols=123 Identities=13% Similarity=0.057 Sum_probs=84.6
Q ss_pred CcCHHHHhhcc---CCCCC-HHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCccc
Q 042007 117 RLPKDKFGICV---GMGES-TEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILT 192 (844)
Q Consensus 117 ~is~~eF~~~l---g~~~~-~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It 192 (844)
.++.+++..+. ++... .....++|+.++ .|+||.|+.+||..+ ..+..... ++.+|+.+|.|+||.|+
T Consensus 8 ~l~~~~~~~~~~~~~ls~~~~~~l~~~F~~~D----~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~ 79 (202)
T 2bec_A 8 AAVIPDGDSIRRETGFSQASLLRLHHRFRALD----RNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVD 79 (202)
T ss_dssp ---CCSTTTHHHHHCCCHHHHHHHHHHHHHHC----SSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCC
T ss_pred CcCHHHHHHHHHccCCCHHHHHHHHHHHHHHC----CCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCc
Confidence 35555555544 33211 112445566444 588999999999998 55543322 89999999999999999
Q ss_pred HHHHHHHHHhhhccc---------cccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 193 EDEVREVIVLSASEN---------KLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 193 ~eEl~~il~~~~~~~---------~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+||..++....... .-........+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 80 ~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 143 (202)
T 2bec_A 80 FPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143 (202)
T ss_dssp HHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 999999885432100 0000023356778899999999999999999999999866
No 219
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.85 E-value=4.1e-09 Score=96.07 Aligned_cols=72 Identities=18% Similarity=0.269 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|+|| +|+.+||+.+++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~-~~lg--~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELP-SFLG--KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCG-GGGT--TCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcc-hhcC--CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 568999999999 89997 9999999999964221 1111 11224568889999999999999999999998754
No 220
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.84 E-value=5.1e-09 Score=90.15 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
..++++.+|+.||+|+||+|+.+||+.++.... .+ .++.++.+|+.+|.|+||.|+|+||..++...+.
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g---~~------~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 77 (86)
T 2opo_A 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLG---SV------TPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG 77 (86)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT---TC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC---CC------CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc
Confidence 457899999999999999999999999997543 22 2566889999999999999999999999987753
No 221
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.84 E-value=3.2e-09 Score=86.35 Aligned_cols=63 Identities=22% Similarity=0.386 Sum_probs=53.8
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
++.+|+.+|+|+||+|+.+|++.+++.... ...++.++.+|+.+|.|++|.|+++||..++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~--------~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA--------IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccC--------CCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 457899999999999999999999975421 223567889999999999999999999999864
No 222
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.83 E-value=4.4e-09 Score=89.82 Aligned_cols=74 Identities=24% Similarity=0.289 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
...++++.+|+.||+|+||+|+.+||+.++........++ ++++++.++.+|+.+|.|+||.|+|+||...+..
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALS--KDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTT--TTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCC--HHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 3456899999999999999999999999997644112233 4556666777999999999999999999987754
No 223
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.83 E-value=1.4e-08 Score=117.62 Aligned_cols=130 Identities=16% Similarity=0.148 Sum_probs=94.0
Q ss_pred HHHHHHcccCCCCcCHHHHhhcc-CCC--CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc--------cCChH
Q 042007 105 IERRFQQFAVSGRLPKDKFGICV-GMG--ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT--------KKDLD 173 (844)
Q Consensus 105 l~~~F~~ld~dG~is~~eF~~~l-g~~--~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~--------~~~~~ 173 (844)
....+.++....++....+..+. .+. +......++|+.+| .|+||.|+++||..++..+. ....+
T Consensus 323 ~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~ 398 (504)
T 3q5i_A 323 ALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLD----KNGDGQLDKKELIEGYNVLRNFKNELGELKNVE 398 (504)
T ss_dssp HHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC----TTCSSEECHHHHHHHHHHHHHHC--CCSCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeC----CCCCCeEcHHHHHHHHHHhhhcccccccccccH
Confidence 33344444445555544443322 221 12234566777555 58899999999999998763 24678
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.++.+|+.+|.|+||.|+.+||..++.... ....++.+..+|+.+|.|+||+|+.+||..++..
T Consensus 399 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~--------~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~ 463 (504)
T 3q5i_A 399 EEVDNILKEVDFDKNGYIEYSEFISVCMDKQ--------ILFSEERLRRAFNLFDTDKSGKITKEELANLFGL 463 (504)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH--------HHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHhhh--------cccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 8999999999999999999999998874221 2224567889999999999999999999999865
No 224
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.83 E-value=1.6e-09 Score=99.96 Aligned_cols=70 Identities=19% Similarity=0.288 Sum_probs=56.1
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.|+.+|+.||.| ||+||.+||+++|+.... +.+. ....++.++.||+++|.|+||.|+|+||..+|...
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~-~~l~--~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFP-GFLE--NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCH-HHHT--TSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhh-hhcc--cCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 5789999999998 899999999999964211 1111 22335678999999999999999999999999754
No 225
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.83 E-value=1.2e-08 Score=96.32 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=82.9
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.++.+|+. |++|.|+.+||..++..... . ...
T Consensus 7 l~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~----~--~~~ 73 (145)
T 2bl0_B 7 IQECFQIFD----KDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIK----T--PTE 73 (145)
T ss_dssp HHHHHHHHC----TTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCC----C--GGG
T ss_pred HHHHHHHhC----CCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhh----c--Ccc
Confidence 677888665 5779999999999999988777778889988888 89999999999998843210 1 223
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g 106 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG 106 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcC
Confidence 466788999999999999999999999998764
No 226
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.82 E-value=6.3e-09 Score=91.36 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.||+|+||+|+.+|++.+++... ++ ++.++.|++++|.|+||.|+|+||..+|...
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g----~~------~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK----LP------ILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS----SC------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC----CC------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 46789999999999999999999999996531 22 4568889999999999999999999999754
No 227
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.82 E-value=5e-10 Score=104.13 Aligned_cols=83 Identities=13% Similarity=0.110 Sum_probs=51.5
Q ss_pred CCceeHHHHHH-----HHHHhc-cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHH
Q 042007 152 ENGITKEEVRM-----FWEDMT-KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIME 225 (844)
Q Consensus 152 dG~I~f~EF~~-----~l~~~~-~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~ 225 (844)
+|.|+|+||+. ++.... .....++++.+|++|| |+|+.+||+.+++..+. .++.++.+|+
T Consensus 22 ~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~----------t~~ei~~~~~ 87 (123)
T 2kld_A 22 KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH----------TDAEIEAIFT 87 (123)
T ss_dssp -----------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS----------SHHHHHHHHH
T ss_pred CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC----------CHHHHHHHHH
Confidence 68899999999 665432 2344567999999999 99999999999854221 3567889999
Q ss_pred HhCCCCCCceeHHHHHHHHHcCC
Q 042007 226 KLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 226 ~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
++|.|+||.|+|+||..+|....
T Consensus 88 ~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 88 KYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp HHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHcCCCCCcCcHHHHHHHHHHHH
Confidence 99999999999999999986554
No 228
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.82 E-value=3.7e-09 Score=87.28 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=57.6
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..+++++.+|+.||+|++|+|+.+||+.++..... . ..++.++.+|+.+|.|++|.|+|+||..++..
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~------~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQ--P------LPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTC--S------SCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 45788999999999999999999999999865321 1 23567889999999999999999999998853
No 229
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.81 E-value=9.5e-09 Score=86.30 Aligned_cols=67 Identities=16% Similarity=0.245 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++++.+|+.||+|++|+|+.+||+.+++.... ...++.++.+|+.+|.|++|.|+|+||..++..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~--------~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 5 QKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGF--------DVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTC--------CCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCC--------CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3568999999999999999999999999976431 123567889999999999999999999999864
No 230
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.81 E-value=3.3e-09 Score=90.24 Aligned_cols=72 Identities=22% Similarity=0.337 Sum_probs=57.8
Q ss_pred cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 169 KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 169 ~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
....+++++ +|+.||+|+||+|+.+||+.++..... .. ..++.++.+|+.+|.|++|.|+|+||..++...+
T Consensus 4 ~~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~-~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 4 QDDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGE-EP------LTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp ---CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTT-CC------CCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred cccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCC-CC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 345678899 999999999999999999998854320 11 2356788999999999999999999999998654
No 231
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=98.81 E-value=1e-08 Score=99.68 Aligned_cols=105 Identities=11% Similarity=0.141 Sum_probs=83.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
.+++|+.++.. + |+||.|+.+||..+|..++...+++.++.++.. |.+++|.|+.+||..++....... ...
T Consensus 11 lre~F~~fD~~-~-d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~~~~~-----~~~ 82 (159)
T 3i5g_C 11 VREVFDLFDFW-D-GRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEMSSKD-----TGT 82 (159)
T ss_dssp HHHHHHHHHHH-T-TSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHHTTCC-----TTC
T ss_pred HHHHHHHHCcC-C-CCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHhhccc-----ccc
Confidence 45678865532 1 569999999999999999877788888887764 888999999999999885433211 122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||+.+|....
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 115 (159)
T 3i5g_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115 (159)
T ss_dssp CHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhC
Confidence 356678899999999999999999999998764
No 232
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.79 E-value=8e-09 Score=119.24 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=81.1
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc--------CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK--------KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASE 206 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~--------~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~ 206 (844)
...++|+.+| .|+||.|+++||..++..+.. ...++.++.+|+.+|.|+||.|+.+||..++....
T Consensus 347 ~l~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~-- 420 (494)
T 3lij_A 347 ELTDIFRHID----KNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK-- 420 (494)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH--
T ss_pred HHHHHHHHhC----cCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhh--
Confidence 4566677554 588999999999999988753 33478999999999999999999999998874221
Q ss_pred ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 207 NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 207 ~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
....++.+..+|+.+|.|+||+|+.+||..++..
T Consensus 421 ------~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~ 454 (494)
T 3lij_A 421 ------SLLSKDKLESAFQKFDQDGNGKISVDELASVFGL 454 (494)
T ss_dssp ------HHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C
T ss_pred ------ccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 1223567889999999999999999999999865
No 233
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.79 E-value=6.8e-09 Score=90.33 Aligned_cols=68 Identities=22% Similarity=0.384 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++++.+|+.||+|++|+|+.+||+.+++.... . ..++.++.+|+.+|.|++|.|+|+||..++...
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~------~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQ--N------PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC--C------CCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 4568999999999999999999999999975422 1 235678899999999999999999999998653
No 234
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.79 E-value=4.8e-09 Score=93.52 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++++.+|+.||+|+||+|+.+|++++++.. ++ .++.++.|++++|.|+||+|+|+||..+|...
T Consensus 9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----~l------~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS----GL------PDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS----SS------CHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc----CC------CHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 35689999999999999999999999999652 12 25678899999999999999999999999754
No 235
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.79 E-value=1.1e-08 Score=93.23 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNEE 251 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~~ 251 (844)
..++++.+|+.||+|+||+|+.+||+.+++. ..+ .++.++.+|+++|.|+||.|+|+||..+|......
T Consensus 12 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~----~~~------~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~~- 80 (111)
T 2kgr_A 12 SRLKYRQLFNSHDKTMSGHLTGPQARTILMQ----SSL------PQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVA- 80 (111)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEHHHHHHHHHT----TCC------CHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHh----CCC------CHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHH-
Confidence 3568999999999999999999999999961 222 24568889999999999999999999998654211
Q ss_pred CCCCCccccchhhcccCCC
Q 042007 252 GPKMNNRTSTLTKAMIPQN 270 (844)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~ 270 (844)
.....| ...+...|.|..
T Consensus 81 ~~G~~l-p~~lp~~l~pps 98 (111)
T 2kgr_A 81 MSGQPL-PPVLPPEYIPPS 98 (111)
T ss_dssp HTTCCC-CSSCCGGGSCTT
T ss_pred HCCCCC-ccccCcccCCCc
Confidence 111234 444556666553
No 236
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.78 E-value=1.3e-08 Score=90.61 Aligned_cols=72 Identities=18% Similarity=0.317 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|+|| +|+.+||+.+++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~-~~lg--~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELT-DFLM--SQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSG-GGGT--TSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhh-hhcc--ccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 467999999998 89998 9999999999964221 1111 12246778999999999999999999999998643
No 237
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=98.78 E-value=2.4e-08 Score=97.41 Aligned_cols=104 Identities=14% Similarity=0.154 Sum_probs=80.3
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc----cCChHHH-H--------HHHHHHhccCCCCcccHHHHHHHHH
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMT----KKDLDAR-L--------QIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~----~~~~~~~-l--------~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
...++|+.++ .|+||.|+.+||..++..+. ....+++ + +.+|+.+| +||.|+.+||..++.
T Consensus 7 ~l~~~F~~~D----~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~ 80 (174)
T 1q80_A 7 KMKTYFNRID----FDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMK 80 (174)
T ss_dssp HHHHHHHHHC----TTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHH
T ss_pred HHHHHHHhcC----CCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHH
Confidence 3556777554 57899999999999998876 4444444 5 46899999 999999999999886
Q ss_pred hhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 202 LSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 202 ~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
....... ......+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 123 (174)
T 1q80_A 81 EMVKNPE---AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML 123 (174)
T ss_dssp HHTTSTT---CHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHcCccc---HHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc
Confidence 5433111 122345678899999999999999999999999765
No 238
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=89.26 Aligned_cols=65 Identities=28% Similarity=0.394 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++++.+|+.||+|+||+|+.+||+.++.... + .++.++.+|+.+|.|+||.|+|+||..++.+
T Consensus 25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g----~------~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 25 ELARLRSVFAACDANRSGRLEREEFRALCTELR----V------RPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT----C------CHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC----c------CHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 456899999999999999999999999996532 2 2456889999999999999999999999864
No 239
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.78 E-value=7.4e-09 Score=92.84 Aligned_cols=84 Identities=8% Similarity=0.083 Sum_probs=67.9
Q ss_pred eeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCc
Q 042007 155 ITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGY 234 (844)
Q Consensus 155 I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~ 234 (844)
++++|+...+..... ...++++.+|+.||+|++|+|+.+||+.++..... .+ .++.++.+|+++|.|++|.
T Consensus 6 ~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~~------~~~e~~~l~~~~d~~~~g~ 76 (105)
T 1wlz_A 6 TADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQ--IL------TDEQFDRLWNEMPVNAKGR 76 (105)
T ss_dssp TCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTC--CC------CHHHHHHHHTTSCBCTTSC
T ss_pred hhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--CC------CHHHHHHHHHHcCCCCCCC
Confidence 677888887765442 34678999999999999999999999999975432 22 3567888999999999999
Q ss_pred eeHHHHHHHHHcC
Q 042007 235 IEMWQLEILLRGM 247 (844)
Q Consensus 235 It~~EF~~ll~~~ 247 (844)
|+|+||..+|...
T Consensus 77 i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 77 LKYPDFLSRFSSE 89 (105)
T ss_dssp BCHHHHHHHHC--
T ss_pred CcHHHHHHHHhcc
Confidence 9999999999754
No 240
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=98.77 E-value=2.4e-08 Score=93.85 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=79.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.+..+|+ |++|.|+.+||..++...... ....
T Consensus 7 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~-----~~~~ 73 (140)
T 1ggw_A 7 YKQAFSLFD----RHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGF-----DMPG 73 (140)
T ss_dssp THHHHHHTC----SSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSS-----SSSC
T ss_pred HHHHHHHHC----CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcc-----cCcc
Confidence 456777555 577999999999999998877777778887776 899999999999988532211 1122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..+.+..+|+.+|.|++|+|+.+||..++...
T Consensus 74 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~ 105 (140)
T 1ggw_A 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105 (140)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc
Confidence 35678899999999999999999999999865
No 241
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.77 E-value=1.5e-08 Score=88.44 Aligned_cols=70 Identities=19% Similarity=0.329 Sum_probs=59.0
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...++++.+|+.||+|+||+|+.+||+.++..... . ..++.++.+|+.+|.|++|.|+|+||..++....
T Consensus 6 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~--~------~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGE--K------LTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC--C------CCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCC--C------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 34678999999999999999999999999975431 1 2356788999999999999999999999997553
No 242
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.76 E-value=1.3e-08 Score=89.96 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhc-cCC-CCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCD-KNG-DGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~-dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.+.++.+|+.|| +|+ +|+|+.+||+.+++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~-~~lg--~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELP-GFLQ--SGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHST-TCC--------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhH-hhcc--cccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 467999999999 798 589999999999964321 1111 1123456889999999999999999999999864
No 243
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.76 E-value=2e-08 Score=115.43 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=79.7
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc----CCh-------HHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK----KDL-------DARLQIFFDMCDKNGDGILTEDEVREVIVLS 203 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~----~~~-------~~~l~~~F~~fD~d~dG~It~eEl~~il~~~ 203 (844)
...++|+.+| .|+||.|+++||..++..+.. ... ++.++.+|+.+|.|+||.|+.+||..++...
T Consensus 336 ~l~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~ 411 (484)
T 3nyv_A 336 ELTAIFHKMD----KNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR 411 (484)
T ss_dssp HHHHHHHHHC----TTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhC----cCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence 3455666555 588999999999877765432 222 7889999999999999999999999988542
Q ss_pred hccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 204 ASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 204 ~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
. ....++.+..+|+.+|.|+||+|+.+||..++..
T Consensus 412 ~--------~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~ 446 (484)
T 3nyv_A 412 K--------TLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446 (484)
T ss_dssp H--------HHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred c--------ccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 1 1224567889999999999999999999999975
No 244
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.76 E-value=1.5e-08 Score=86.92 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.||+|+||+|+.+||+.+++.... ...++.+..+|+.+|.|++|.|+|+||..++...
T Consensus 13 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~--------~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGA--------NPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSS--------CCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467999999999999999999999999975421 1235678899999999999999999999999754
No 245
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.76 E-value=8e-09 Score=93.18 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhc-cCCC-CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGD-GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~d-G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|+| |+|+.+||+.+++.... .... . ++.++.||+++|.|+||.|+|+||..+|...
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg-~~~~--~---~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLP-HLLK--D---VGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCT-TTTT--T---CCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcC-cCCC--C---HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 457999999999 7997 79999999999964221 1111 0 1347789999999999999999999998643
No 246
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.75 E-value=1.1e-08 Score=90.45 Aligned_cols=71 Identities=13% Similarity=0.210 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.+.++.+|+.|| +|+|| +|+.+||+.+++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|..
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~-~~lg--~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELA-NTIK--NIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTH-HHHH--HCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhh-hhcc--ccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 457999999999 89998 9999999999964221 0011 1123567899999999999999999999999864
No 247
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.74 E-value=1.9e-08 Score=90.17 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=56.1
Q ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHh----hhccccccc-----cccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 175 RLQIFFDMCDKNGDGILTEDEVREVIVL----SASENKLSN-----LKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~It~eEl~~il~~----~~~~~~l~~-----~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
.++.+|++||+|+||+|+.+||+.++.. ... ...+. .++...+.+..+|+++|.|+||.|+++||..++.
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g-~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYD-PKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSC-CSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhc-cCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 4888999999999999999999999974 111 11111 1122345688999999999999999999999987
Q ss_pred cC
Q 042007 246 GM 247 (844)
Q Consensus 246 ~~ 247 (844)
+.
T Consensus 100 ~~ 101 (103)
T 1snl_A 100 RK 101 (103)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 248
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=98.74 E-value=2.1e-08 Score=102.40 Aligned_cols=85 Identities=8% Similarity=0.128 Sum_probs=68.6
Q ss_pred CCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCc-ccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCC
Q 042007 152 ENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGI-LTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPD 230 (844)
Q Consensus 152 dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~-It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d 230 (844)
||.|+.+||.. +..+...... ..+|+++|.|+||. |+.+||..++..... ....++.+..+|+.+|.|
T Consensus 73 dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~-------~~~~~~~l~~~F~~~D~d 141 (214)
T 2l4h_A 73 RAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLSVFSD-------TATPDIKSHYAFRIFDFD 141 (214)
T ss_dssp TSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHHHHTSS-------CSCHHHHHHHHHHHHCTT
T ss_pred CCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHHHHHcC-------CCCHHHHHHHHHHHhCCC
Confidence 39999999999 7666554443 35799999999999 999999998854321 122456788999999999
Q ss_pred CCCceeHHHHHHHHHcC
Q 042007 231 CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 231 ~dG~It~~EF~~ll~~~ 247 (844)
++|+|+.+||..++...
T Consensus 142 ~dG~Is~~El~~~l~~~ 158 (214)
T 2l4h_A 142 DDGTLNREDLSRLVNCL 158 (214)
T ss_dssp CSSCBCHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHH
Confidence 99999999999999755
No 249
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=98.74 E-value=2.9e-08 Score=95.59 Aligned_cols=105 Identities=10% Similarity=0.094 Sum_probs=83.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++- + .|++|.|+.+||..++..+.....++.+..+|..+|.+ +|.|+.+||..++....... ...
T Consensus 11 l~~~F~~~D~-~-~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~-----~~~ 82 (159)
T 2ovk_C 11 VREVFDLFDF-W-DGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSKD-----TGT 82 (159)
T ss_dssp HHHHHHHHHH-H-TTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCS-----TTC
T ss_pred HHHHHHHhCC-C-CCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhcc-----CCC
Confidence 4556664430 0 26699999999999999988778899999999999975 79999999999885322111 222
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g 115 (159)
T 2ovk_C 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115 (159)
T ss_dssp CHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC
Confidence 456788899999999999999999999998764
No 250
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.73 E-value=1.3e-08 Score=85.22 Aligned_cols=69 Identities=14% Similarity=0.310 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHh-ccCCC-CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMC-DKNGD-GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~f-D~d~d-G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
..++++.+|+.| |+|++ |+|+.+||+.++..... .+.. .++.++.+|+.+|.|++|.|+|+||..++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~--~~~~----~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP--SLLK----GMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG--GSCT----TSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC--CcCC----CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 467899999999 99999 99999999999976532 1200 1234778999999999999999999999864
No 251
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=98.72 E-value=6.6e-08 Score=92.70 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=79.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|..++ .|+||.|+.+||..++..+.....++.+..+|+ ++||.|+.+||..++..... ...
T Consensus 20 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~-------~~~ 84 (156)
T 1wdc_B 20 MKEAFSMID----VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS-------GTD 84 (156)
T ss_dssp HHHHHHHHC----TTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTC-------SCC
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhc-------CCC
Confidence 456677554 578999999999999998877777888888775 58999999999998864322 112
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||..++....
T Consensus 85 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 117 (156)
T 1wdc_B 85 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMG 117 (156)
T ss_dssp CHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhC
Confidence 356788999999999999999999999998763
No 252
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.72 E-value=1.6e-08 Score=121.51 Aligned_cols=134 Identities=12% Similarity=0.142 Sum_probs=99.1
Q ss_pred HHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcc------cCCCCCCceeHHHHHHHHHHhccCChHHHHHHHH
Q 042007 107 RRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARR------RKVNTENGITKEEVRMFWEDMTKKDLDARLQIFF 180 (844)
Q Consensus 107 ~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~------~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F 180 (844)
..|++ |+||+|+.+|+.+++...... ..+++++++.. .+.+++|.|+|+||..++..+.. .++++.+|
T Consensus 162 ~~fd~-n~dG~Is~kEl~~~l~~~~~~--~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~---R~EI~eiF 235 (816)
T 3qr0_A 162 LTTVE-MEKNKIPVKAIQKCLSKDKDD--RARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE---RSEIEGIF 235 (816)
T ss_dssp HHHTS-CCSSEEEHHHHHHHHCSCHHH--HHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC---CTHHHHHH
T ss_pred HhccC-CCCCCCCHHHHHHHHHhcCCh--HHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC---HHHHHHHH
Confidence 35664 689999999999998654211 23455544432 13467899999999999998764 34899999
Q ss_pred HHhccCCCCcccHHHHHHHHHhhhcccccccc--ccchHHHHHHHHHHhCC--C----CCCceeHHHHHHHHHcC
Q 042007 181 DMCDKNGDGILTEDEVREVIVLSASENKLSNL--KENSSTYAALIMEKLDP--D----CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 181 ~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~--~~~~~e~~~~if~~~D~--d----~dG~It~~EF~~ll~~~ 247 (844)
+.||.|++|.||. ||+++|+.......+.+. ....++.++.|++++|. | ++|.|++++|..+|...
T Consensus 236 ~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 236 KELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp HHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred HHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 9999999999999 999999764322211100 01347789999999987 5 78999999999999754
No 253
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.72 E-value=1.1e-08 Score=96.48 Aligned_cols=85 Identities=15% Similarity=0.138 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNEE 251 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~~ 251 (844)
..++++.+|+.|| |+||+|+.+|++++++... ++ ++.+++|++.+|.|+||.|+|+||..+|.....-
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g----l~------~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~~~- 116 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK----LP------NTVLGKIWKLADVDKDGLLDDEEFALANHLIKVK- 116 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT----CC------HHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC----cC------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHH-
Confidence 4678999999999 9999999999999996521 22 5568899999999999999999999999755211
Q ss_pred CCCCCccccchhhcccCC
Q 042007 252 GPKMNNRTSTLTKAMIPQ 269 (844)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~ 269 (844)
-....| ...+...|.|.
T Consensus 117 ~~G~~l-P~~LP~~l~pp 133 (139)
T 2jq6_A 117 LEGHEL-PADLPPHLVPP 133 (139)
T ss_dssp HTTSCC-CSCCCTTSSCG
T ss_pred HcCCCC-CcccCcccCCc
Confidence 112345 45566666654
No 254
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.72 E-value=9.2e-09 Score=93.51 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=63.7
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCC
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNE 250 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~ 250 (844)
...++++.+|+.||+|+||+|+.+|++.+++.. +++ ++.++.|++++|.|+||+|+|+||..+|......
T Consensus 19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~----gl~------~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~~~ 88 (110)
T 1iq3_A 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKS----KLS------IPELSYIWELSDADCDGALTLPEFCAAFHLIVAR 88 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS----SCS------SCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc----CCC------HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHH
Confidence 456789999999999999999999999998532 122 2347789999999999999999999999755211
Q ss_pred CCCCCCccccchhhcccCC
Q 042007 251 EGPKMNNRTSTLTKAMIPQ 269 (844)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~ 269 (844)
.....+ ...+...|.|.
T Consensus 89 -~~G~~l-P~~LP~~l~pp 105 (110)
T 1iq3_A 89 -KNGYPL-PEGLPPTLQPE 105 (110)
T ss_dssp -HHTCCC-CCCSSCCSCSS
T ss_pred -HcCCCC-CcccChhhCcC
Confidence 112334 44455555543
No 255
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.71 E-value=2.3e-08 Score=87.67 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=56.1
Q ss_pred HHHHHHHHHhccCCCC---cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 174 ARLQIFFDMCDKNGDG---ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG---~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
+.++.+|+.|| |+|| +|+.+||+.+++.... ..+. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~-~~lg--~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELS-HFLE--EIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCT-TTSC--CCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhh-hhcc--CcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 57899999999 7777 9999999999975221 1122 22346789999999999999999999999998754
No 256
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=98.70 E-value=2.2e-08 Score=94.38 Aligned_cols=94 Identities=17% Similarity=0.040 Sum_probs=60.6
Q ss_pred HHHHHHHcccCCCCcCHHHHhhccCCCCC----HHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHHHH
Q 042007 104 SIERRFQQFAVSGRLPKDKFGICVGMGES----TEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARLQI 178 (844)
Q Consensus 104 ~l~~~F~~ld~dG~is~~eF~~~lg~~~~----~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l~~ 178 (844)
++.+.++. +++|.|+.+||..++..... .....++|+.++ .|++|.|+.+||..++..+. ....++.++.
T Consensus 7 ~l~~~~D~-d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~ 81 (135)
T 3h4s_E 7 SMLLETTS-TTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLA----DPERHLITAESLRRNSGILGIEGMSKEDAQG 81 (135)
T ss_dssp -------------CCCC-----------CHHHHHHHHHHHHHHHS----BTTTTBBCHHHHHHHGGGGTCCCCCHHHHHH
T ss_pred HHHHHHcC-CCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHC----CCCCCcCCHHHHHHHHHHhCCCCCCHHHHHH
Confidence 34444443 48999999999988853211 234566777554 57799999999999999888 4778899999
Q ss_pred HHHHhccCCCCcccHHHHHHHHHh
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
+|+.+|.|+||+|+.+||..++..
T Consensus 82 ~~~~~D~d~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 82 MVREGDLDGDGALNQTEFCVLMVR 105 (135)
T ss_dssp HHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999964
No 257
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.70 E-value=1.6e-08 Score=88.67 Aligned_cols=69 Identities=17% Similarity=0.279 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|+|| +|+.+||+.+++.... +.. ..++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~---~~~---~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELC---LGE---MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSC---CTT---TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcC---CCC---CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 457999999999 99999 9999999999975321 110 123457889999999999999999999999754
No 258
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.70 E-value=2e-08 Score=115.55 Aligned_cols=101 Identities=15% Similarity=0.201 Sum_probs=73.9
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc----c----------CChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMT----K----------KDLDARLQIFFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~----~----------~~~~~~l~~~F~~fD~d~dG~It~eEl~~il 200 (844)
...++|+.+| .|+||.|+++||..++..+. . ...++.++.+|+.+|.|+||.|+.+||...+
T Consensus 332 ~l~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~ 407 (486)
T 3mwu_A 332 QLTEIFRKLD----TNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407 (486)
T ss_dssp HHHHHHHHHC----TTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence 4566677555 68899999999987775442 1 2348899999999999999999999998776
Q ss_pred HhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 201 VLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 201 ~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.... ....++.+..+|+.+|.|+||+|+.+||..++...
T Consensus 408 ~~~~--------~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~ 446 (486)
T 3mwu_A 408 IDRT--------ILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA 446 (486)
T ss_dssp SCTT--------TTCCHHHHHHHHHHHCSSCSSSBCSSCC-------
T ss_pred Hhhh--------ccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc
Confidence 3211 12235678899999999999999999999999765
No 259
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.67 E-value=4e-08 Score=89.73 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHH-hhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIV-LSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~-~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.|| +|+|| +|+.+||+++++ .... .+.. ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~--~~~~-~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQN--FLKK-ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTT--TTTT-GGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhh--hhcc-cccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 357899999999 59999 999999999997 3221 1100 00235678999999999999999999999998643
No 260
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=98.67 E-value=7.6e-08 Score=91.17 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=82.3
Q ss_pred HHHHHHHHhcccCCCC-CCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 136 SVGVFEALARRRKVNT-ENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~-dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
..++|..++ .|+ ||.|+.+||..++..+.....++.++.+|+.+|.| |+.+||..++..... ..
T Consensus 16 l~~~F~~~D----~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~-------~~ 80 (146)
T 2qac_A 16 ESDVRIYFN----EKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVH-------DK 80 (146)
T ss_dssp HHHHHHHHH----HHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCC-------TT
T ss_pred HHHHHHHhC----ccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhc-------Cc
Confidence 456788666 588 99999999999999988778888999999999988 999999998864321 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 114 (146)
T 2qac_A 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWG 114 (146)
T ss_dssp CCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSS
T ss_pred chHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhC
Confidence 2356788999999999999999999999998763
No 261
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=98.66 E-value=2.1e-09 Score=96.83 Aligned_cols=95 Identities=19% Similarity=0.347 Sum_probs=76.0
Q ss_pred HHHHHHHHcccCCCCcCHHHHhhccCCCC-CHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh---ccCChHHHHHH
Q 042007 103 RSIERRFQQFAVSGRLPKDKFGICVGMGE-STEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM---TKKDLDARLQI 178 (844)
Q Consensus 103 ~~l~~~F~~ld~dG~is~~eF~~~lg~~~-~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~---~~~~~~~~l~~ 178 (844)
+++.+.|..+|++|.|+.+||..++.... ......++|+.++ .|++|.|+.+||..++..+ .....++.++.
T Consensus 9 ~e~~~l~~~~d~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D----~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~ 84 (108)
T 2kyc_A 9 SDIAAALRDCQAPDSFSPKKFFQISGMSKKSSSQLKEIFRILD----NDQSGFIEEDELKYFLQRFESGARVLTASETKT 84 (108)
T ss_dssp HHHHHHHTTSCSTTTCCHHHHHHHHTCTTCCSSSHHHHCSSSC----SCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHH
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHhhCcccHHHHHHHHHHhC----CCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHH
Confidence 44566777777999999999999885532 2234566676444 5789999999999999988 45566788999
Q ss_pred HHHHhccCCCCcccHHHHHHHHH
Q 042007 179 FFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+|+.+|.|+||+|+.+||..++.
T Consensus 85 ~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 85 FLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp HHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHhCCCCCCcCCHHHHHHHHh
Confidence 99999999999999999998774
No 262
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.66 E-value=4e-08 Score=88.59 Aligned_cols=84 Identities=21% Similarity=0.277 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCCCC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNEEG 252 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~~~ 252 (844)
.++++.+|+.||+ +||+|+.+|++.+++.+. ++ ++.++.|++++|.|+||.|+|+||..+|.....- -
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g----l~------~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~~~-~ 81 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK----LP------VDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCA-L 81 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT----CC------HHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC----CC------HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHH-H
Confidence 4578899999999 999999999999996531 22 5568889999999999999999999999755211 1
Q ss_pred CCCCccccchhhcccCC
Q 042007 253 PKMNNRTSTLTKAMIPQ 269 (844)
Q Consensus 253 ~~~~l~~~~~~~~~~~~ 269 (844)
....+ ...+...|.|.
T Consensus 82 ~g~~l-P~~LP~~l~pp 97 (106)
T 1eh2_A 82 EKEPV-PMSLPPALVPP 97 (106)
T ss_dssp HTCCC-CSSCCTTTSCT
T ss_pred cCCCC-CCCCCcccCCh
Confidence 11244 45566666654
No 263
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=98.65 E-value=1.3e-07 Score=91.54 Aligned_cols=98 Identities=19% Similarity=0.185 Sum_probs=79.6
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc-CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTK-KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~-~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
..++|..++ .|+||.|+.+||..++..+.. ...++.+..+|+.+ ||.|+.+||..++..... ..
T Consensus 27 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~-------~~ 91 (166)
T 2mys_B 27 FKEAFTVID----QNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLK-------GA 91 (166)
T ss_pred HHHHHHHHC----CCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhc-------cC
Confidence 456677555 578999999999999998887 77788888888764 799999999998864322 11
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 92 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 125 (166)
T 2mys_B 92 DPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG 125 (166)
T ss_pred CcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcC
Confidence 2356788899999999999999999999998653
No 264
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.64 E-value=1.2e-08 Score=97.31 Aligned_cols=91 Identities=12% Similarity=0.059 Sum_probs=45.3
Q ss_pred HHHHHccc--CCCCcCHHHHhhccCCC--------CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc------
Q 042007 106 ERRFQQFA--VSGRLPKDKFGICVGMG--------ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK------ 169 (844)
Q Consensus 106 ~~~F~~ld--~dG~is~~eF~~~lg~~--------~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~------ 169 (844)
...|..+| +||.|+.+||...+... ...+...++|+.++ .|+||.|+++||..++..+..
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~~~~~ 105 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHD----YDGNNLLDGLELSTAITHVHKEEGSEQ 105 (143)
T ss_dssp ---------------------------------CCCHHHHHHHHHHHTC----TTCSSCEEHHHHHHTCC----------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhC----CCCCCccCHHHHHHHHHHHHhhhcccc
Confidence 34566666 89999999999887321 12345667788554 577999999999998876521
Q ss_pred --CChHHH----HHHHHHHhccCCCCcccHHHHHHHH
Q 042007 170 --KDLDAR----LQIFFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 170 --~~~~~~----l~~~F~~fD~d~dG~It~eEl~~il 200 (844)
...+++ ++.+|+.+|.|+||+|+.+||..++
T Consensus 106 g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 106 APLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp ---CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 223333 4677899999999999999998765
No 265
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.64 E-value=3.7e-08 Score=86.04 Aligned_cols=73 Identities=21% Similarity=0.344 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 172 LDARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 172 ~~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++++.+|+.|| +|++| +|+.+||+.++...... -+. ....++.++.+|+++|.|+||.|+|+||..++...
T Consensus 7 ~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~-~~g--~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSS-FLD--VQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHH-HHH--CCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHH-HhC--CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3567999999999 79999 99999999999751100 000 11235678899999999999999999999998754
No 266
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=98.64 E-value=1.8e-08 Score=103.79 Aligned_cols=100 Identities=15% Similarity=0.136 Sum_probs=74.1
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHH-HhccCCh----HHHHHHHHHHh-----ccCCCCcccHHHHHHHHHhhhc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWE-DMTKKDL----DARLQIFFDMC-----DKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~-~~~~~~~----~~~l~~~F~~f-----D~d~dG~It~eEl~~il~~~~~ 205 (844)
..++|+.++ .|+||.|+++||..++. .+..... ++.++.+|+.+ |.|++|.|+.+||..++.....
T Consensus 53 l~~~F~~~D----~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~ 128 (226)
T 2lvv_A 53 RIELFKQFD----TNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCY 128 (226)
T ss_dssp HHHHHHHHG----GGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHh
Confidence 556788665 57799999999999554 3333323 44555666666 9999999999999986432111
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
. ..++.+..+|+.+|.|++|+|+.+||..+|...
T Consensus 129 ---~-----~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 162 (226)
T 2lvv_A 129 ---I-----YDIFELTVMFDTMDKDGSLLLELQEFKEALPKL 162 (226)
T ss_dssp ---H-----HHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHH
T ss_pred ---c-----cCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHH
Confidence 1 124578899999999999999999999999754
No 267
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.63 E-value=4.9e-08 Score=83.94 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHH---HHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 171 DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTY---AALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~---~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...++++.+|+.||+|+||+|+.+||+.+++.... .+ .++. +..+|+++|.|++|.|+| ||..++.+.
T Consensus 11 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~------~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 11 EEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ--TY------TKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp THHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSC--CC------SHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC--CC------CHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 44678999999999999999999999999976432 12 2344 889999999999999999 999998653
No 268
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.62 E-value=3.7e-08 Score=86.40 Aligned_cols=67 Identities=15% Similarity=0.231 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcc-CCCC-cccHHHHHHHH-HhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDK-NGDG-ILTEDEVREVI-VLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~-d~dG-~It~eEl~~il-~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.||+ |+|| +|+.+||+.++ +.... .++ .+.++.+|+++|.|+||.|+|+||..++...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~--~~~------~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ--YIR------KKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH--HHH------TTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcc--cCC------HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4579999999999 9999 99999999999 43221 111 1235789999999999999999999998643
No 269
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=98.61 E-value=7.7e-08 Score=90.59 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=74.3
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhC
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLD 228 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D 228 (844)
.|++|.|+.+||..++..+.....++.+..+|.. ++|.|+.+||..++..... ....++.+..+|+.+|
T Consensus 18 ~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~-------~~~~~~~l~~~F~~~D 86 (143)
T 3j04_B 18 QNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLN-------GTDPEDVIRNAFACFD 86 (143)
T ss_dssp SSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTT-------SSCCHHHHHHHHTTSC
T ss_pred CCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhc-------cCCcHHHHHHHHHHHC
Confidence 5889999999999999988877777788777765 8999999999999864322 1223567888999999
Q ss_pred CCCCCceeHHHHHHHHHcCC
Q 042007 229 PDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 229 ~d~dG~It~~EF~~ll~~~~ 248 (844)
.|++|+|+.+||..++....
T Consensus 87 ~d~~G~I~~~El~~~l~~~g 106 (143)
T 3j04_B 87 EEASGFIHEDHLRELLTTMG 106 (143)
T ss_dssp SSSCCCCCTTTHHHHHHTSS
T ss_pred CCCCCeEcHHHHHHHHHHcC
Confidence 99999999999999998664
No 270
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.61 E-value=9.9e-08 Score=80.01 Aligned_cols=62 Identities=15% Similarity=0.226 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhC-CC----CCCceeHHHHHHHH
Q 042007 170 KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLD-PD----CKGYIEMWQLEILL 244 (844)
Q Consensus 170 ~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D-~d----~dG~It~~EF~~ll 244 (844)
...++.++.+|++| +|++|+||.+||++- + .++.++.|++++| .| ++|.|+|+||.++|
T Consensus 6 ~~~~eel~eAFr~f-~dg~G~It~~eLr~~---------l------t~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m 69 (75)
T 1h8b_A 6 TDTAEQVIASFRIL-ASDKPYILAEELRRE---------L------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSAL 69 (75)
T ss_dssp CSTHHHHHHHHHHH-TTSCSSBCHHHHHHH---------S------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-hcCCCCcCHHHHHhc---------C------CHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHH
Confidence 45788999999999 999999999999981 2 2667889999999 56 58999999999999
Q ss_pred HcC
Q 042007 245 RGM 247 (844)
Q Consensus 245 ~~~ 247 (844)
...
T Consensus 70 ~~~ 72 (75)
T 1h8b_A 70 YGE 72 (75)
T ss_dssp TCC
T ss_pred hcc
Confidence 754
No 271
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.61 E-value=3.7e-08 Score=90.76 Aligned_cols=65 Identities=12% Similarity=0.167 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHccc-CCCCcCHHHHhhccC--------CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHh
Q 042007 99 NDAWRSIERRFQQFA-VSGRLPKDKFGICVG--------MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDM 167 (844)
Q Consensus 99 ~~~~~~l~~~F~~ld-~dG~is~~eF~~~lg--------~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~ 167 (844)
...++.+.+.|+++| .||+|+++||+++|. ...+...+.++++.++ .|+||.|+|+||+.++..+
T Consensus 11 E~~ie~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D----~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLD----QCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHC----TTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHc----CCCCCcCcHHHHHHHHHHH
Confidence 446788999999988 789999999999873 3344566888888777 6889999999999998654
No 272
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.61 E-value=7.1e-08 Score=86.86 Aligned_cols=69 Identities=7% Similarity=0.020 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..++++.+|+.||+|+||+|+.+||+.++...+. .+ .++.+..+|+.+|.|++|.|+|+||..++....
T Consensus 30 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~------~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGV--PK------THLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTC--CC------CHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--CC------CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 4567999999999999999999999999975432 12 356788999999999999999999999997543
No 273
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.61 E-value=7.3e-08 Score=80.90 Aligned_cols=70 Identities=19% Similarity=0.355 Sum_probs=55.2
Q ss_pred ChHHHHHHHHHHhcc-CCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 171 DLDARLQIFFDMCDK-NGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 171 ~~~~~l~~~F~~fD~-d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
...++++.+|+.||. |+|| +|+.+||+.+++.... ..+. .++.++.+|+.+|.|+||.|+|+||..++..
T Consensus 4 ~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g-~~~~-----~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFP-SLLK-----GPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCS-SCCS-----SCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhh-hhcc-----cHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 346789999999999 9999 9999999999964221 1110 1223567999999999999999999999864
No 274
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=98.59 E-value=1.6e-07 Score=92.65 Aligned_cols=87 Identities=8% Similarity=0.115 Sum_probs=69.7
Q ss_pred CC-C--CceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCc-ccHHHHHHHHHhhhccccccccccchHHHHHHHHH
Q 042007 150 NT-E--NGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGI-LTEDEVREVIVLSASENKLSNLKENSSTYAALIME 225 (844)
Q Consensus 150 d~-d--G~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~-It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~ 225 (844)
|+ + |.|+.+||.. +..+...... ..+|+++|.|++|. |+.+||..++..... ....++.+..+|+
T Consensus 37 ~~~~~~G~i~~~el~~-l~~~g~~~~~---~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~-------~~~~~~~l~~~F~ 105 (183)
T 1dgu_A 37 VESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLSVFSD-------TATPDIKSHYAFR 105 (183)
T ss_dssp SCCCTTTCSCHHHHHT-STTSSSCTTH---HHHHHHHSCSSSSCCCCHHHHHHHHHHHST-------TCCHHHHHHHHHH
T ss_pred ccccccCcCcHHHHHH-HHhhhcCcHH---HHHHHHhCCCCCCCEecHHHHHHHHHHhcC-------CCCHHHHHHHHHH
Confidence 56 7 9999999999 7665544443 35789999999999 999999998864321 1223567889999
Q ss_pred HhCCCCCCceeHHHHHHHHHcC
Q 042007 226 KLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 226 ~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+|.|++|+|+.+||..++...
T Consensus 106 ~~D~d~~G~I~~~El~~~l~~~ 127 (183)
T 1dgu_A 106 IFDFDDDGTLNREDLSRLVNCL 127 (183)
T ss_dssp HHCTTCSSEEEHHHHHHHHHHH
T ss_pred HhCCCCCCcCCHHHHHHHHHHH
Confidence 9999999999999999999755
No 275
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.59 E-value=5e-08 Score=84.49 Aligned_cols=70 Identities=20% Similarity=0.302 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.|| +|+|| +|+.+||+.+++.... ++ ....++.++.+|+++|.|+||.|+|+||..++...
T Consensus 9 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~---~g--~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 9 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELT---IG--SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSC---CG--GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcc---cC--CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 458999999999 69999 9999999999974210 11 11234568899999999999999999999988643
No 276
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=98.59 E-value=5.3e-08 Score=93.08 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=79.2
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.+..+|..+ +|.|+.+||..++..... ...
T Consensus 18 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~-------~~~ 82 (153)
T 2ovk_B 18 LKEAFTMID----QDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVS-------GTD 82 (153)
T ss_dssp HHHHHHHHC----CSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTT-------TCC
T ss_pred HHHHHHHhC----CCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhc-------cCC
Confidence 455666554 57899999999999998887777888999999887 899999999888743221 112
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
..+.+..+|+.+|.|++|+|+.+||..++....
T Consensus 83 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g 115 (153)
T 2ovk_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115 (153)
T ss_dssp CTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC
Confidence 245678899999999999999999999998764
No 277
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.58 E-value=9.4e-08 Score=85.23 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.||++ +|+|+.+||+.+++..... .+.......++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~-~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPN-FLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHH-HHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHh-hhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45799999999977 8999999999999652110 0000001122346679999999999999999999998643
No 278
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=98.58 E-value=1.4e-07 Score=90.90 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=78.0
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..++....++.++.++ .+++|.|+.+||..++..... ...
T Consensus 18 lk~~F~~~D----~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~-------~~~ 82 (153)
T 3i5g_B 18 LKEAFTMID----QDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVS-------GTD 82 (153)
T ss_dssp HHHHHHHHC----CSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTT-------TCC
T ss_pred HHHHHHHHC----CCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhc-------ccc
Confidence 456788555 57899999999999999998777777766554 467889999999887743221 122
Q ss_pred hHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 216 SSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.++.+..+|+.+|.|++|+|+.+||+.+|....
T Consensus 83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g 115 (153)
T 3i5g_B 83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115 (153)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSS
T ss_pred cHHHHHHHHhccccCCCCeEeHHHHHHHHHHcC
Confidence 467788999999999999999999999998764
No 279
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=98.57 E-value=3.2e-08 Score=101.28 Aligned_cols=100 Identities=10% Similarity=0.092 Sum_probs=72.9
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHH-hccC----ChHHHHHHHHH----Hhc-cCCCCcccHHHHHHHHHhhhc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWED-MTKK----DLDARLQIFFD----MCD-KNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~-~~~~----~~~~~l~~~F~----~fD-~d~dG~It~eEl~~il~~~~~ 205 (844)
..++|+.++ .|+||.|+++||..++.. +... ..++.++.+|+ ++| .|++|.|+.+||..++.....
T Consensus 50 l~~~F~~~D----~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~ 125 (219)
T 3cs1_A 50 RIELFKKFD----KNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCY 125 (219)
T ss_dssp HHHHHHHHC----TTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHhC----CCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhc
Confidence 456677555 578999999999998876 4432 22334444544 333 489999999999988743211
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...++.+..+|+.+|.|++|+|+.+||..++...
T Consensus 126 --------~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 159 (219)
T 3cs1_A 126 --------IYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKL 159 (219)
T ss_dssp --------HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHH
T ss_pred --------cchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh
Confidence 1124668899999999999999999999999754
No 280
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=98.57 E-value=2e-07 Score=93.57 Aligned_cols=98 Identities=9% Similarity=0.028 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|..++ .|+||.|+.+||..++..+.....++.+..+|..+ +|.|+.+||..++..... ..
T Consensus 58 ~l~~~F~~~D----~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~-------~~ 122 (196)
T 3dtp_E 58 EFKEAFQLID----QDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIA-------GT 122 (196)
T ss_dssp HHHHHHHHHC----CSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCC-------SS
T ss_pred HHHHHHHHHC----CCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhc-------CC
Confidence 4567788665 57899999999999999888777888899988877 899999999998864322 12
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.+..+|+.+|.|++|+|+.+||..+| ...
T Consensus 123 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g 155 (196)
T 3dtp_E 123 DEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWG 155 (196)
T ss_dssp CCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSS
T ss_pred CcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcC
Confidence 235678889999999999999999999999 664
No 281
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.56 E-value=2.4e-08 Score=95.97 Aligned_cols=82 Identities=5% Similarity=0.067 Sum_probs=59.9
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccc
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKEN 215 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~ 215 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.++.+|+.+|.|+||+|+.+||..++...
T Consensus 52 l~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~------------ 115 (150)
T 2jjz_A 52 FKEKYMEFD----LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK------------ 115 (150)
T ss_dssp HHHHHTTSC----CCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS------------
T ss_pred HHHHHHHhC----CCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh------------
Confidence 444455333 5889999999999999988777788899999999999999999999999988532
Q ss_pred hHHHHHHHHHHhCCCCCCc
Q 042007 216 SSTYAALIMEKLDPDCKGY 234 (844)
Q Consensus 216 ~~e~~~~if~~~D~d~dG~ 234 (844)
.+.+..+|+.+|.|++|+
T Consensus 116 -~~~i~~aF~~~D~d~~G~ 133 (150)
T 2jjz_A 116 -RSAVLKLVMMFEGKANES 133 (150)
T ss_dssp -SCCHHHHHHC--------
T ss_pred -HHHHHHHHHHHcCCCCCC
Confidence 112667999999999997
No 282
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.54 E-value=8.4e-08 Score=92.15 Aligned_cols=83 Identities=6% Similarity=0.097 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDA 174 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~ 174 (844)
+..+++.+.|+.+| ++|.|+.+||..++ |...+...+.++++.++ .|+||.|+|+||+.++... .+
T Consensus 47 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D----~d~dg~I~~~eF~~~~~~~-----~~ 117 (150)
T 2jjz_A 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT----GGVSDTISYRDFVNMMLGK-----RS 117 (150)
T ss_dssp HHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHH----TTSCSSBCHHHHHHHHHSS-----SC
T ss_pred HHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHC----CCCCCcEeHHHHHHHHHHh-----HH
Confidence 45677888888888 79999999999887 55556777888888766 5779999999999998754 34
Q ss_pred HHHHHHHHhccCCCCcc
Q 042007 175 RLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~I 191 (844)
.++.+|+.||.|++|+-
T Consensus 118 ~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 118 AVLKLVMMFEGKANESS 134 (150)
T ss_dssp CHHHHHHC---------
T ss_pred HHHHHHHHHcCCCCCCC
Confidence 69999999999999984
No 283
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.53 E-value=9.1e-08 Score=84.62 Aligned_cols=71 Identities=18% Similarity=0.255 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.++.+|+.||. +||+|+.+||+.+++..... .++ ....++.++.+|+++|.|+||.|+|+||..+|...
T Consensus 8 ~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~-~lg--~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 8 METMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPG-FLE--NQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHH-HHH--HSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCeECHHHHHHHHHHHccc-ccc--cccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4679999999994 56799999999999642110 011 11124568889999999999999999999998743
No 284
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.53 E-value=1e-07 Score=84.33 Aligned_cols=70 Identities=19% Similarity=0.268 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhc-cCCCC-cccHHHHHHHHHh-hhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 173 DARLQIFFDMCD-KNGDG-ILTEDEVREVIVL-SASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 173 ~~~l~~~F~~fD-~d~dG-~It~eEl~~il~~-~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
.++++.+|+.|| +|+|| +|+.+||+.++.. .... +. ....++.++.+|+++|.|+||.|+|+||..++..
T Consensus 12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~--~~--~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~ 84 (99)
T 1qls_A 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAF--TQ--NQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 84 (99)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHH--HH--HCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchh--cc--ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 457999999998 99999 9999999999962 2100 00 1122456889999999999999999999998864
No 285
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=98.53 E-value=4.2e-08 Score=97.01 Aligned_cols=99 Identities=12% Similarity=0.212 Sum_probs=69.1
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHh------ccCChHHHHHHH---------HHHhccCCCCcccHHHHHHHH
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDM------TKKDLDARLQIF---------FDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~------~~~~~~~~l~~~---------F~~fD~d~dG~It~eEl~~il 200 (844)
..++|+.++ .|+||.|+++||..++..+ .....++.++.+ |+.+|.|+||+|+.+| .++
T Consensus 16 l~~~F~~~D----~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~ 89 (186)
T 2hps_A 16 MKTRMQRVD----VTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSL 89 (186)
T ss_dssp HHHHHHTTC----TTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHH
T ss_pred HHHHhhhcC----CCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHH
Confidence 445555443 5789999999999999866 333445666666 7999999999999999 455
Q ss_pred HhhhccccccccccchHHHHHHHH--HHhCCCCCCceeHHHHHHHHHcC
Q 042007 201 VLSASENKLSNLKENSSTYAALIM--EKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 201 ~~~~~~~~l~~~~~~~~e~~~~if--~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
...... ....+.+...| +.+|.|++|+|+++||..++...
T Consensus 90 ~~~~~~-------~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~ 131 (186)
T 2hps_A 90 LKMKGE-------EKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAV 131 (186)
T ss_dssp HHCCTH-------HHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHhcCC-------hHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHh
Confidence 332110 00111222333 56699999999999999999765
No 286
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=98.49 E-value=1.7e-07 Score=94.83 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=72.4
Q ss_pred HHHHHHHHcccCCCCcCHHHHhhccCCCC-------------------CHHHHHHHHHHHhcccCCCCCCceeHHHHHHH
Q 042007 103 RSIERRFQQFAVSGRLPKDKFGICVGMGE-------------------STEFSVGVFEALARRRKVNTENGITKEEVRMF 163 (844)
Q Consensus 103 ~~l~~~F~~ld~dG~is~~eF~~~lg~~~-------------------~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~ 163 (844)
+++.+.|+. +++|.|+.+||..++.... ....+..+|+.+| .|+||.|+.+||..+
T Consensus 64 ~~l~~~~d~-~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D----~d~dG~Is~~El~~~ 138 (208)
T 2ct9_A 64 DRIINAFFS-EGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD----LDKDDKISRDELLQV 138 (208)
T ss_dssp HHHHHTTSC-TTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHC----TTCSSEECHHHHHHH
T ss_pred HHHHHHHcC-CCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHC----CCCCCEEcHHHHHHH
Confidence 334444432 3899999999988873211 2345677788555 578999999999999
Q ss_pred HHHh-ccCChHHHHHHH----HHHhccCCCCcccHHHHHHHHHh
Q 042007 164 WEDM-TKKDLDARLQIF----FDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 164 l~~~-~~~~~~~~l~~~----F~~fD~d~dG~It~eEl~~il~~ 202 (844)
+..+ +....++.++.+ |+.+|.|+||+|+.+||..++..
T Consensus 139 l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp HHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9876 655667777766 99999999999999999998854
No 287
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=98.47 E-value=8.8e-08 Score=91.69 Aligned_cols=83 Identities=6% Similarity=0.093 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDA 174 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~ 174 (844)
+..+++.+.|+.+| +||.|+.+||..++ |...+...+.+++..++ .|+||.|+|+||+.++... ++
T Consensus 45 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D----~d~dg~I~~~eF~~~~~~~-----~~ 115 (147)
T 1wy9_A 45 SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVS----SGSEETFSYSDFLRMMLGK-----RS 115 (147)
T ss_dssp HHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHC----SSCTTEECHHHHHHHHCSS-----GG
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhC----CCCCCcEeHHHHHHHHHHh-----HH
Confidence 56777888888888 78999999999887 55556677888888665 5779999999999988533 55
Q ss_pred HHHHHHHHhccCCCCcc
Q 042007 175 RLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 175 ~l~~~F~~fD~d~dG~I 191 (844)
.++.+|+.||.|++|..
T Consensus 116 ~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 116 AILRMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGGGGCCCC-----
T ss_pred HHHHHHHHHccCCCCCC
Confidence 78899999999999985
No 288
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.47 E-value=3.4e-08 Score=116.38 Aligned_cols=97 Identities=13% Similarity=0.211 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccccccccc
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKE 214 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~ 214 (844)
...++|+.+| .|+||.|+++||..++..+.....+++++.+|+.+|.|+||.|+.+||.+++.....
T Consensus 12 ~l~~~F~~fD----~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~--------- 78 (624)
T 1djx_A 12 WIHSCLRKAD----KNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ--------- 78 (624)
T ss_dssp ------------------------------------------------------------CTTHHHHHHTC---------
T ss_pred HHHHHHHHhC----CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---------
Confidence 3566777555 577999999999999998877777889999999999999999999999999864321
Q ss_pred chHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 215 NSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 215 ~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
++.+..+|+.+|.| +|+|+++||+.+|...
T Consensus 79 --~~el~~aF~~fD~~-~G~Is~~EL~~fL~~~ 108 (624)
T 1djx_A 79 --RAEIDRAFEEAAGS-AETLSVERLVTFLQHQ 108 (624)
T ss_dssp --CHHHHHHHHHHHTT-SSSEEHHHHHHHHHHT
T ss_pred --HHHHHHHHHHhcCC-CCeecHHHHHHHHHHH
Confidence 24578899999986 9999999999999854
No 289
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=98.45 E-value=2.6e-07 Score=88.43 Aligned_cols=68 Identities=7% Similarity=0.086 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
..++++.+|+.||+|+||+|+.+||+.++..... .+ .++.++.+|+.+|.|++|.|+|+||..++...
T Consensus 46 ~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~--~~------~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 113 (147)
T 1wy9_A 46 KLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV--PK------THLELKRLIREVSSGSEETFSYSDFLRMMLGK 113 (147)
T ss_dssp HHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTC--CC------CHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--CC------CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 4568999999999999999999999999975421 12 35678899999999999999999999999754
No 290
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=98.40 E-value=6.9e-07 Score=88.42 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHcc--cCCCCcCHHHHhhccC---CCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHH-HhccC-C
Q 042007 99 NDAWRSIERRFQQF--AVSGRLPKDKFGICVG---MGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWE-DMTKK-D 171 (844)
Q Consensus 99 ~~~~~~l~~~F~~l--d~dG~is~~eF~~~lg---~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~-~~~~~-~ 171 (844)
.+...++.+.|+.. +++|.|+.+||..++. ..........+|+.++ .|+||.|+.+|+..++. .++.. .
T Consensus 58 ~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~F~~~D----~d~dG~Is~~El~~~l~~~~g~~~~ 133 (179)
T 3a8r_A 58 DEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVD----KNADGRLTAEEVKEIIALSASANKL 133 (179)
T ss_dssp HHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHHHHHHC----TTCSSCBCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHC----CCCCCcCCHHHHHHHHHHHhccccc
Confidence 34566677777653 2678999999987651 1223445777888554 57799999999999997 66543 2
Q ss_pred ------hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 172 ------LDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 172 ------~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.++.++.+|+.+|.|+||+|+.+||..++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 169 (179)
T 3a8r_A 134 SKIKERADEYTALIMEELDPTNLGYIEMEDLEALLL 169 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC
T ss_pred cccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 678899999999999999999999999884
No 291
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.39 E-value=8.3e-07 Score=71.83 Aligned_cols=62 Identities=24% Similarity=0.343 Sum_probs=54.7
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
..++|+.++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|+||.|+.+||.+++.
T Consensus 3 l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 3 AKRVFEKFD----KNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp HHHHHHHHC----TTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 456777655 57799999999999999888777889999999999999999999999999885
No 292
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.38 E-value=3.9e-07 Score=73.75 Aligned_cols=61 Identities=23% Similarity=0.419 Sum_probs=53.2
Q ss_pred HHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 137 VGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 137 ~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.++|+.++ .|+||.|+++||..++..+.....++.++.+|+.+|.|+||+|+.+||..++.
T Consensus 3 ~~~F~~~D----~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 3 EALFKEID----VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CHHHHHHC----TTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHC----CCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 35677555 57799999999999999887667788999999999999999999999999874
No 293
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.34 E-value=4.1e-07 Score=81.01 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=22.8
Q ss_pred CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHH
Q 042007 151 TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREV 199 (844)
Q Consensus 151 ~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~i 199 (844)
+||.|+.+||..++..++....+++++.+|+.+|.|+||.|+.+||.++
T Consensus 49 ~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~ 97 (100)
T 2lv7_A 49 GNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97 (100)
T ss_dssp CSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHH
Confidence 3444444444444444433333444444455555555555555554443
No 294
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.34 E-value=2.8e-07 Score=79.15 Aligned_cols=83 Identities=14% Similarity=0.211 Sum_probs=64.8
Q ss_pred CCCCcCHHHHhhccCCCC-CHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCccc
Q 042007 114 VSGRLPKDKFGICVGMGE-STEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILT 192 (844)
Q Consensus 114 ~dG~is~~eF~~~lg~~~-~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It 192 (844)
++|.|+.+|..-...+.. ......++|+.++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|+||+|+
T Consensus 2 ~~G~i~~~e~~~~~~l~~~~~~~~~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~ 77 (87)
T 1s6j_A 2 SSGHIDDDDKHMAERLSEEEIGGLKELFKMID----TDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77 (87)
T ss_dssp CSSSSSSHHHHSSSSSCSSSTTTTTTHHHHHC----TTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEEC
T ss_pred CCCccCccHHHHHHHCCHHHHHHHHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCc
Confidence 589999998432222321 1223567788665 57799999999999999888777889999999999999999999
Q ss_pred HHHHHHHH
Q 042007 193 EDEVREVI 200 (844)
Q Consensus 193 ~eEl~~il 200 (844)
.+||..++
T Consensus 78 ~~eF~~~~ 85 (87)
T 1s6j_A 78 YGEFIAAT 85 (87)
T ss_dssp HHHHTTCC
T ss_pred HHHHHHHH
Confidence 99986543
No 295
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.30 E-value=2.2e-06 Score=75.20 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 131 ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 131 ~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.......++|+.++ .|+||.|+.+||..++..+.....++.++.+|+.+|.|+||+|+.+||..++.
T Consensus 26 ~~~~~l~~~F~~~D----~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVED----KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHC----TTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHC----CCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34556777788655 46789999999999888887667788899999999999999999999988774
No 296
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.30 E-value=2.4e-06 Score=74.17 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=46.2
Q ss_pred HHHHHHHHHHccc--CCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCC---h
Q 042007 101 AWRSIERRFQQFA--VSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKD---L 172 (844)
Q Consensus 101 ~~~~l~~~F~~ld--~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~---~ 172 (844)
..+++.+.|+.+| ++|.|+.+||..++ |...+...+.+++..++ .|+||.|+|+||+.++....... .
T Consensus 7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d----~~~dg~i~~~eF~~~~~~~~~~~~~~~ 82 (92)
T 2kn2_A 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD----LDGDGQVNYEEFVKMMMTVRGGGGGNG 82 (92)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHC----SSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhC----CCCCCcEeHHHHHHHHHhccCCCCCch
Confidence 3444455555544 67777777777665 44445556666666544 46677777777777776544321 3
Q ss_pred HHHHHHHHH
Q 042007 173 DARLQIFFD 181 (844)
Q Consensus 173 ~~~l~~~F~ 181 (844)
.++++.+|+
T Consensus 83 ~~~l~~aF~ 91 (92)
T 2kn2_A 83 WSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 355666663
No 297
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.29 E-value=1.5e-06 Score=79.46 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.+|+ +||+|+.+|++.++..+ ++. ++.+.+|++.+|.|+||.|+++||..+|.-.
T Consensus 32 ~~~y~~iF~~lD~-~dG~Isg~elr~~~~~s----gLp------~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 32 RAKHDQQFHSLKP-ISGFITGDQARNFFFQS----GLP------QPVLAQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp HHHHHHHHHHTCC-BTTBEEHHHHHHHHGGG----CCC------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeECHHHHHHHHHHc----CCC------HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4578899999998 89999999999999642 232 5678899999999999999999999988644
No 298
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.24 E-value=3e-06 Score=70.67 Aligned_cols=64 Identities=13% Similarity=0.231 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|++|+|+.+||..++..
T Consensus 8 ~l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 8 EIKEAFDLFD----TNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHC----CSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHhC----CCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3566777554 577999999999999998887788899999999999999999999999988843
No 299
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.22 E-value=8.8e-07 Score=109.28 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=75.4
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhC
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLD 228 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D 228 (844)
.|+||.|+.+||..++..++....++.+..+|+.+|.|+||+|+.+||..++..... ....++.+..+|+.+
T Consensus 736 ~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~-------~~~~~~~l~~aF~~~- 807 (863)
T 1sjj_A 736 RKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETA-------DTDTADQVMASFKIL- 807 (863)
T ss_dssp SSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHST-------TCSSSHHHHHHHHGG-
T ss_pred CCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc-------CCCCHHHHHHHHHHH-
Confidence 588999999999999998887777889999999999999999999999998854321 112245678899999
Q ss_pred CCCCCceeHHHHHHHHH
Q 042007 229 PDCKGYIEMWQLEILLR 245 (844)
Q Consensus 229 ~d~dG~It~~EF~~ll~ 245 (844)
.|++|+|+.+||..+|.
T Consensus 808 ~d~~G~Is~~El~~~l~ 824 (863)
T 1sjj_A 808 AGDKNYITVDELRRELP 824 (863)
T ss_dssp GTSSSEEEHHHHHHHSC
T ss_pred hCCCCcCcHHHHHHHCC
Confidence 89999999999998874
No 300
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.16 E-value=4.2e-06 Score=70.12 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=54.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++ .|++|.|+.+||..++..+. ...++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 5 l~~~F~~~D----~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 5 MERIFKRFD----TNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp HHHHHHHHC----TTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 567788665 57799999999999999888 777889999999999999999999999998853
No 301
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.15 E-value=5.5e-06 Score=70.83 Aligned_cols=63 Identities=16% Similarity=0.245 Sum_probs=51.7
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++ .|+||.|+.+||..++..+. ...++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 12 ~l~~~F~~~D----~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 12 DRERIFKRFD----TNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHC----TTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHC----CCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3456666554 57799999999999998877 677888999999999999999999999888854
No 302
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.13 E-value=6.1e-07 Score=84.79 Aligned_cols=67 Identities=16% Similarity=0.095 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhccC-CCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCC
Q 042007 173 DARLQIFFDMCDKN-GDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVN 249 (844)
Q Consensus 173 ~~~l~~~F~~fD~d-~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~ 249 (844)
-..++++|.+||.| +||+|+.+|++.+++... ..+..++.+|+.+|.|+||.||++||...+...+.
T Consensus 76 ~~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~----------~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~~~~ 143 (151)
T 1sra_A 76 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI----------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQK 143 (151)
T ss_dssp HHHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS----------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCCGG
T ss_pred hhHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc----------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCCCHH
Confidence 34799999999997 999999999998884321 23456789999999999999999999999865543
No 303
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.13 E-value=5.9e-06 Score=70.37 Aligned_cols=63 Identities=13% Similarity=0.258 Sum_probs=48.2
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++ .|+||.|+.+||..++..+.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 16 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 78 (85)
T 2ktg_A 16 YKEAFQLFD----KDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLE 78 (85)
T ss_dssp HHHHHHHTC----TTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 445565443 466888888888888887766667788888888888888888888888887754
No 304
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.11 E-value=2e-06 Score=70.49 Aligned_cols=63 Identities=19% Similarity=0.233 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHH
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il 200 (844)
....++|+.++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|+||.|+.+||..++
T Consensus 6 ~~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 68 (71)
T 2b1u_A 6 EDLQVAFRAFD----QDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68 (71)
T ss_dssp HHHHHHHTTSC----CSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHH
T ss_pred HHHHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 34555666443 5779999999999998887766778889999999999999999999998877
No 305
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.11 E-value=5.3e-06 Score=68.90 Aligned_cols=67 Identities=27% Similarity=0.351 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhcccCCCCC-CceeHHHHHHHHHHhccCC--hHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 133 TEFSVGVFEALARRRKVNTE-NGITKEEVRMFWEDMTKKD--LDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 133 ~~~~~~lf~~l~~~~~~d~d-G~I~f~EF~~~l~~~~~~~--~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
.....++|+.+.| .|++ |.|+.+||..++..+.... .++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 4 ~~~l~~~F~~~~D---~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 4 PEEIKGAFEVFAA---KEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHT---SSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc---cCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4456778886613 4668 9999999999998887666 7778999999999999999999999988853
No 306
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.10 E-value=8.5e-06 Score=70.39 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=47.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++ .|++|.|+.+||..++..+.....++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 22 l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 22 FKAAFDMFD----ADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHC----TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 445566444 466888888888888877766667778888888888888888888888877753
No 307
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.09 E-value=4.1e-06 Score=74.67 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
....++|+.++ .|++|.|+.+||..++..+.....++.++.+|..+|.|+||.|+.+||..++.
T Consensus 24 ~~l~~~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 24 HAITQEFENFD----TMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 87 (105)
T ss_dssp HHHHHHHHHHC----TTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred HHHHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence 44667788655 57799999999999999888777889999999999999999999999999884
No 308
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.06 E-value=9e-06 Score=70.62 Aligned_cols=51 Identities=22% Similarity=0.317 Sum_probs=33.0
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.|+||.|+.+||..++..+. ..++.++.+|+.+|.|+||+|+.+||..++.
T Consensus 38 ~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 38 ANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp TTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred CCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 35566666666666665554 3455667777777777777777777766653
No 309
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.06 E-value=1.1e-05 Score=73.29 Aligned_cols=82 Identities=13% Similarity=0.143 Sum_probs=52.6
Q ss_pred HHHHHHHHhcccCCCCCC-ceeHHHHHHHHH-HhccC-----ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhcccc
Q 042007 136 SVGVFEALARRRKVNTEN-GITKEEVRMFWE-DMTKK-----DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENK 208 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~-~~~~~-----~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~ 208 (844)
..++|+.++++ |+|| .|+.+||..++. .+... ..++.++.+|+.+|.|+||.|+.+||..++....
T Consensus 14 l~~~F~~fD~~---dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~---- 86 (113)
T 1xk4_C 14 IINTFHQYSVK---LGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT---- 86 (113)
T ss_dssp HHHHHHHHHTT---SSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH----
T ss_pred HHHHHHHHhhc---CCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH----
Confidence 45567755522 5688 999999999987 55431 3577899999999999999999999999885422
Q ss_pred ccccccchHHHHHHHHHHhCCCCCCc
Q 042007 209 LSNLKENSSTYAALIMEKLDPDCKGY 234 (844)
Q Consensus 209 l~~~~~~~~e~~~~if~~~D~d~dG~ 234 (844)
..+...|...| +++|.
T Consensus 87 ---------~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 87 ---------WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp ---------HHHHC------------
T ss_pred ---------HHHHHHHhhCC-CCCcc
Confidence 22445788888 88885
No 310
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.04 E-value=3.9e-06 Score=70.87 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc-cCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 133 TEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT-KKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 133 ~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~-~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
..... +|+.++ .|++|.|+.+||..++..+. ....++.++.+|+.+|.|+||+|+.+||..++.
T Consensus 8 ~~~l~-~F~~~D----~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 72 (81)
T 1c7v_A 8 EEILR-AFKVFD----ANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72 (81)
T ss_dssp HHHHH-HHHHHS----CSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHH-HHHHHC----CCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 34456 788555 57799999999999988877 667788999999999999999999999988885
No 311
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.02 E-value=1e-05 Score=72.03 Aligned_cols=64 Identities=16% Similarity=0.195 Sum_probs=46.8
Q ss_pred HHHHHHHHhcccCCCCC-CceeHHHHHHHHHH-h----ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTE-NGITKEEVRMFWED-M----TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~d-G~I~f~EF~~~l~~-~----~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++++ ||| |.|+.+|+..++.. + .....++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 12 l~~aF~~fd~~---dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 12 IVCTFQEYAGR---CGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHTT---SSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHhhc---CCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 45566655533 445 88888888888874 3 34456778888888888888888888888888754
No 312
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.02 E-value=1.7e-05 Score=70.24 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=46.1
Q ss_pred HHHHHHHHhcccCCCCCC-ceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTEN-GITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.+++ .|||| .|+.+|+..++.. +.....++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 13 l~~~F~~fd~---~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 82 (98)
T 3n22_A 13 LVTTFHKYSS---QEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82 (98)
T ss_dssp HHHHHHHHHT---TSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4455665553 24564 8888888888864 233456778888888888888888888888888754
No 313
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.01 E-value=6.5e-06 Score=69.75 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc--cCChHHHHHH----HHHHhccCCCCcccHHHHHHHHHh
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT--KKDLDARLQI----FFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~--~~~~~~~l~~----~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
....++|+.++ .|+||.|+.+||..++..+. ....++.++. +|+.+|.|+||+|+.+||...+..
T Consensus 7 ~~l~~~F~~~D----~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 7 AELEAAFKKLD----ANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp THHHHHHHHHS----SSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHC----CCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 34677888665 57799999999999998877 5556666777 999999999999999999876643
No 314
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.99 E-value=1.6e-06 Score=78.77 Aligned_cols=93 Identities=9% Similarity=0.196 Sum_probs=67.6
Q ss_pred hhhhhhhhhhhccCCCchHHHHHHHHHHH-----cccCCCCcCHHHHhhcc----CCC-CCHHHHHHHHHHHhccc----
Q 042007 82 RGLQSLRFLDRTVTGKENDAWRSIERRFQ-----QFAVSGRLPKDKFGICV----GMG-ESTEFSVGVFEALARRR---- 147 (844)
Q Consensus 82 ~~l~~l~~i~~~~~~~~~~~~~~l~~~F~-----~ld~dG~is~~eF~~~l----g~~-~~~~~~~~lf~~l~~~~---- 147 (844)
+.+..|+..+.. ...+++++++.|. +.+++|.|+.++|+.++ ... ....++..+|+.++...
T Consensus 11 e~l~~L~~~t~f----s~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~ 86 (118)
T 1tuz_A 11 SDFAQLQKYMEY----STKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNE 86 (118)
T ss_dssp HHHHHHHHHHHH----CCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTC
T ss_pred HHHHHHHHHccc----CHHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhccccccc
Confidence 445555544332 2247888899994 44599999999999987 222 46789999999766310
Q ss_pred CCCCCCceeHHHHHHHHHHhccCChHHHHHH
Q 042007 148 KVNTENGITKEEVRMFWEDMTKKDLDARLQI 178 (844)
Q Consensus 148 ~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~ 178 (844)
..+++|.|+|+||+++++.+..+..++||++
T Consensus 87 ~~~~~g~I~fkefi~~LSll~rG~~edKLew 117 (118)
T 1tuz_A 87 TNVTKDVVCLNDVSCYFSLLEGGRPEDKLEW 117 (118)
T ss_dssp CCCCSCCEEHHHHHHHHHHHHSCCCSCCCCC
T ss_pred ccCCCCeEeHHHHHHHHHHhcCCCHHHhhcc
Confidence 0124899999999999999998888887754
No 315
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=97.99 E-value=1.3e-05 Score=71.98 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 151 TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 151 ~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+||.|+.+|+..++.... ..++.+..+++..|.|+||+|+.+||..++.
T Consensus 27 ~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~ 75 (106)
T 1eh2_A 27 VNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMF 75 (106)
T ss_dssp SSSCCBHHHHHHHHHTTT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 466666666666665542 4455666666666666666666666666664
No 316
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=97.93 E-value=1.1e-05 Score=71.66 Aligned_cols=63 Identities=16% Similarity=0.265 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
....++|+.++ .|+||.|+.+|+..++.... ..++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 11 ~~~~~~F~~~D----~d~dG~Is~~el~~~l~~~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 11 PVYEKYYRQVE----AGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp THHHHHHHHHC----CTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHC----CCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 44677888665 57799999999999997653 56888999999999999999999999998864
No 317
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=97.93 E-value=1e-05 Score=67.55 Aligned_cols=67 Identities=24% Similarity=0.309 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHhcccCC-CCCC-ceeHHHHHHHHHH-hccCC-hHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 132 STEFSVGVFEALARRRKV-NTEN-GITKEEVRMFWED-MTKKD-LDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 132 ~~~~~~~lf~~l~~~~~~-d~dG-~I~f~EF~~~l~~-~~~~~-~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
......++|+.++ . |++| .|+.+||..++.. +.... .++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 5 ~~~~l~~~F~~~D----~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYA----AKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHH----TTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh----ccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 3455778888666 5 6699 9999999999975 55434 6677889999999999999999999988853
No 318
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=97.93 E-value=2.8e-05 Score=69.52 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=44.4
Q ss_pred HHHHHHHHhcccCCCCC-CceeHHHHHHHHHH-hc----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTE-NGITKEEVRMFWED-MT----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~d-G~I~f~EF~~~l~~-~~----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.+++ .||| |.|+.+||..++.. +. ....++.+..+|+.+|.|+||.|+.+||..++..
T Consensus 15 l~~aF~~fD~---~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 15 MVSTFHKYSG---KEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHT---SSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 4455665542 2444 67888888888764 33 2345777888888888888888888888887754
No 319
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=97.93 E-value=1.3e-05 Score=70.32 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.+| .|+||.|+.+|+..++..+. ..++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 11 ~~~~~F~~~D----~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 11 KYDEIFLKTD----KDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHC----TTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHhC----CCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 4566777555 57799999999999987763 56788999999999999999999999988854
No 320
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.92 E-value=1e-05 Score=72.04 Aligned_cols=70 Identities=14% Similarity=0.181 Sum_probs=52.8
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHH----h-ccCCh-----------HHHHHHHHHHhccCCCCcc
Q 042007 128 GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWED----M-TKKDL-----------DARLQIFFDMCDKNGDGIL 191 (844)
Q Consensus 128 g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~----~-~~~~~-----------~~~l~~~F~~fD~d~dG~I 191 (844)
|+..+...+..+|+.++ .|+||.|+.+||..++.. + ..... +..++.+|+.+|.|+||+|
T Consensus 14 ~~~~~~~~~~~~F~~~D----~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~I 89 (103)
T 1snl_A 14 GLDPNRFNPKTFFILHD----INSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLV 89 (103)
T ss_dssp SCCSCCCCHHHHHHHHC----SSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEE
T ss_pred ccCcccCCHHHHHHHHc----CCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcC
Confidence 44433334778888665 577999999999999885 2 32221 1358899999999999999
Q ss_pred cHHHHHHHHH
Q 042007 192 TEDEVREVIV 201 (844)
Q Consensus 192 t~eEl~~il~ 201 (844)
|.+||..++.
T Consensus 90 s~~EF~~~~~ 99 (103)
T 1snl_A 90 TLEEFLASTQ 99 (103)
T ss_dssp EHHHHHHHHH
T ss_pred CHHHHHHHHh
Confidence 9999998874
No 321
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=97.92 E-value=1.8e-05 Score=71.77 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=47.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++ .|+||.|+.+|+..++. .....++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 16 l~~~F~~~D----~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~ 76 (111)
T 2kgr_A 16 YRQLFNSHD----KTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHL 76 (111)
T ss_dssp HHHHHHTTS----CSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 344555433 57789999999998887 33456778999999999999999999999888843
No 322
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=97.90 E-value=2.5e-05 Score=68.41 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=40.9
Q ss_pred HHHHHHHHhcccCCCCC-CceeHHHHHHHHHH-hc----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTE-NGITKEEVRMFWED-MT----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~d-G~I~f~EF~~~l~~-~~----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.+++ .||| |.|+.+|+..++.. +. ....++.+..+++.+|.|+||.|+.+||..++..
T Consensus 12 l~~~F~~fd~---~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 12 MVSTFHKYSG---KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHT---SSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHcc---cCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 4455665542 2343 67777777777764 33 2234667777788888888888888887777743
No 323
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=97.90 E-value=2.9e-05 Score=67.30 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcccCCCCCC-ceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTEN-GITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++.. |++| .|+.+||..++.. +.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 10 ~l~~~F~~~D~~---d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 10 TLINVFHAHSGK---EGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHTT---SSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHccc---CCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 356677755512 5688 9999999999986 666677889999999999999999999999998854
No 324
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=97.88 E-value=2.8e-05 Score=66.34 Aligned_cols=63 Identities=11% Similarity=0.002 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH---HHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR---LQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~---l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++ .|+||.|+.+||..++..++....++. ++.+|+.+|.|++|.|+. ||..++..
T Consensus 15 ~l~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 15 ECMKIFDIFD----RNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHS----TTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHhC----CCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 3556677554 467888888888888888776666777 888899999999999999 98887754
No 325
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=97.88 E-value=2e-05 Score=68.67 Aligned_cols=61 Identities=21% Similarity=0.264 Sum_probs=48.5
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.++ .|+||.|+.+|+..++..+. ..++.++.+|+.+|.|+||+|+.+||..++..
T Consensus 11 ~~~~F~~~D----~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 71 (92)
T 1fi6_A 11 YVNQFKTIQ----PDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHTTTC----CSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 344555333 57799999999999987763 45778999999999999999999999888853
No 326
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=97.87 E-value=4.1e-05 Score=66.67 Aligned_cols=64 Identities=16% Similarity=0.314 Sum_probs=47.2
Q ss_pred HHHHHHHHhcccCCCC-CCceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNT-ENGITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~-dG~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|+.+++ + || +|.|+.+|+..++.. +.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 11 l~~~F~~~D~--~-dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 80 (92)
T 3rm1_A 11 LIDVFHQYSG--R-EGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAM 80 (92)
T ss_dssp HHHHHHHHHT--S-SSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHcc--C-CCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 4556665552 1 22 458888888888877 555567788888899999999999999998888854
No 327
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=97.84 E-value=2.2e-05 Score=70.34 Aligned_cols=62 Identities=6% Similarity=0.117 Sum_probs=52.4
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
..++|+.+| .|+||.|+.+||..++..++....++.++.+|..+|.|+||.|+.+||..++.
T Consensus 34 l~~~F~~~D----~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~ 95 (107)
T 2d58_A 34 FKEKYMEFD----LNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95 (107)
T ss_dssp HHHHHTTSC----CCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHS
T ss_pred HHHHHHHHC----CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 444555333 57899999999999999888777889999999999999999999999998884
No 328
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=97.83 E-value=3.2e-05 Score=66.47 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcccCCCCCC-ceeHHHHHHHHHH---hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTEN-GITKEEVRMFWED---MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~---~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++.+ |++| .|+.+||..++.. +.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 11 ~l~~~F~~~D~~---d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 11 LLVAIFHKYSGR---EGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHTS---SSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---CCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 345667755511 6689 9999999999986 666667788999999999999999999999988854
No 329
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=97.83 E-value=5.5e-05 Score=66.98 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcccCCCCCC-ceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTEN-GITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.+++ .|++| .|+.+||..++.. +.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 11 ~l~~~F~~fDd---~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 11 ALITVFHNYSG---SEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHT---SSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHhc---cCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 34566776553 25576 8888888888865 333456778888888889999999999888888753
No 330
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=97.82 E-value=8.4e-05 Score=77.20 Aligned_cols=87 Identities=10% Similarity=0.193 Sum_probs=68.1
Q ss_pred CCCceeHHHHHHHHHHhcc-------C------ChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchH
Q 042007 151 TENGITKEEVRMFWEDMTK-------K------DLDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSS 217 (844)
Q Consensus 151 ~dG~I~f~EF~~~l~~~~~-------~------~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~ 217 (844)
++..++-.|....+..+-. . ..+.-+..+|+.||.|+||+|+..||+..+..... ...+
T Consensus 96 ~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~r--------G~le 167 (261)
T 1eg3_A 96 NDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCK--------AHLE 167 (261)
T ss_dssp TTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTSS--------SCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHHHcC--------CCHH
Confidence 4667888888777643311 0 12446888999999999999999999988865322 2356
Q ss_pred HHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 218 TYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 218 e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
|..+-+|+.+| |+||+|+.+|+..++..
T Consensus 168 eKL~w~F~lyD-D~~G~I~~~El~~il~~ 195 (261)
T 1eg3_A 168 DKYRYLFKQVA-SSTGFCDQRRLGLLLHD 195 (261)
T ss_dssp HHHHHHHHHHS-CTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHheee-CCCCCCcHHHHHHHHHH
Confidence 77889999999 99999999999999964
No 331
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=97.80 E-value=1.4e-05 Score=70.46 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHH
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVI 200 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il 200 (844)
++.+..+|+.+|.|+||.|+.+||..++
T Consensus 48 ~~ev~~l~~~~D~d~dG~I~f~EF~~~~ 75 (96)
T 1a4p_A 48 PLAVDKIMKDLDQCRDGKVGFQSFFSLI 75 (96)
T ss_dssp TTHHHHHHHHHCTTSSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3344444445555555555555554444
No 332
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=97.78 E-value=3.8e-05 Score=69.71 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=32.7
Q ss_pred CCCC-ceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 150 NTEN-GITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 150 d~dG-~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
|+|| .|+.+||..++.. +.....++.++.+++.+|.|+||.|+.+||..++.
T Consensus 35 dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~ 92 (113)
T 2lnk_A 35 EGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 92 (113)
T ss_dssp TSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHH
T ss_pred CCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 4454 6666666666653 22333455667777777777777777777766664
No 333
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=97.78 E-value=4.9e-05 Score=66.72 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcccCCCCCC-ceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKVNTEN-GITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.+++ .|+|| .|+.+||..++.. +.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 13 ~l~~~F~~fD~---~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 13 GIVNIFHQYSV---RKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHT---SSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhc---cCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 35566776552 25576 8999999888865 334456778999999999999999999999888853
No 334
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=97.77 E-value=9.1e-06 Score=72.19 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHccc-CCCCcCHHHHhhccCC----------CCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHH
Q 042007 100 DAWRSIERRFQQFA-VSGRLPKDKFGICVGM----------GESTEFSVGVFEALARRRKVNTENGITKEEVRMFWE 165 (844)
Q Consensus 100 ~~~~~l~~~F~~ld-~dG~is~~eF~~~lg~----------~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~ 165 (844)
++.+++.+.|+.+| ++|+|+.+||+.++.. ..+...+.++++.++ .|+||.|+|+||+.++.
T Consensus 7 ~~~~~l~~~F~~fD~~~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D----~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 7 RSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKD----KNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHHHHTCCTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHC----TTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhC----CCCCCcCcHHHHHHHHH
Confidence 44566666666665 5677777777766621 112223444444333 45566666666666554
No 335
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=97.73 E-value=3.1e-05 Score=67.43 Aligned_cols=64 Identities=11% Similarity=0.240 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcccCC-CCCC-ceeHHHHHHHH-HHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 135 FSVGVFEALARRRKV-NTEN-GITKEEVRMFW-EDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~-d~dG-~I~f~EF~~~l-~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
...++|+.++ . |+|| .|+.+||..++ ..+.....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 11 ~l~~~F~~~D----~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 11 SIIDVYHKYS----LIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHH----TSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHh----hcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3456677555 4 6688 99999999888 55543233356788999999999999999999988853
No 336
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=97.72 E-value=2e-05 Score=71.34 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
....++|+.++ .|+||.|+.+|+..++..+. ..++.++.+++.+|.|+||+|+.+||..++.
T Consensus 22 ~~~~~~F~~~D----~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~ 83 (110)
T 1iq3_A 22 EYYVNQFRSLQ----PDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH 83 (110)
T ss_dssp HHHHHHHHHHC----CSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHC----CCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 34555566444 35567777777766664432 3344566677777777777777777776664
No 337
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=97.72 E-value=5.1e-05 Score=66.08 Aligned_cols=65 Identities=14% Similarity=0.206 Sum_probs=47.3
Q ss_pred HHHHHHHHhcccCCCCCC-ceeHHHHHHHHHHhcc--CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Q 042007 136 SVGVFEALARRRKVNTEN-GITKEEVRMFWEDMTK--KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLS 203 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~~~~~--~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~ 203 (844)
..++|+.++++ |+|| .|+.+||..++..... ...++.++.+|+.+|.|+||.|+.+||..++...
T Consensus 12 l~~~F~~~D~~---d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 12 MVTTFHKYSGR---EGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHTT---SSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhh---CCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45566655533 5588 8999999888875311 1455678888999999999999999998888543
No 338
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=97.71 E-value=0.00011 Score=65.17 Aligned_cols=52 Identities=21% Similarity=0.181 Sum_probs=36.8
Q ss_pred CCceeHHHHHHHHHHhcc-----CChHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Q 042007 152 ENGITKEEVRMFWEDMTK-----KDLDARLQIFFDMCDKNGDGILTEDEVREVIVLS 203 (844)
Q Consensus 152 dG~I~f~EF~~~l~~~~~-----~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~ 203 (844)
+|.|+.+|+..++..... ...++.+..+|+.+|.|+||.|+.+||..++...
T Consensus 28 ~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 28 KNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp TTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 677888887777765321 1235678888888888888888888888877543
No 339
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.70 E-value=2.2e-05 Score=94.87 Aligned_cols=94 Identities=12% Similarity=0.157 Sum_probs=68.8
Q ss_pred HHHHHHHH--HHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhcc-------CCCCcccHHHHHHHHHhhh
Q 042007 134 EFSVGVFE--ALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDK-------NGDGILTEDEVREVIVLSA 204 (844)
Q Consensus 134 ~~~~~lf~--~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~-------d~dG~It~eEl~~il~~~~ 204 (844)
....+.|. .++ .|+||.|+.+|+..+|.. .+++++.+++.+|. |++|.|+.+||.+++....
T Consensus 146 ~~Lk~~F~~~~fD----~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~ 216 (799)
T 2zkm_X 146 TFLDKILVKLKMQ----LNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 216 (799)
T ss_dssp HHHHHHHHHHHHS----CCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS
T ss_pred HHHHHHhHHhccC----CCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc
Confidence 45667777 444 577999999999988753 36889999999985 8999999999999996532
Q ss_pred ccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 205 SENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 205 ~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
. ++.+..+|+.+|.|++|+||.+||+.+|.+.
T Consensus 217 ~-----------r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~ 248 (799)
T 2zkm_X 217 P-----------RPEIDEIFTSYHAKAKPYMTKEHLTKFINQK 248 (799)
T ss_dssp C-----------CHHHHTTCC--------CCCHHHHHHHHHHT
T ss_pred C-----------HHHHHHHHHHhccCCCCeEcHHHHHHHHHHh
Confidence 1 2457789999999999999999999999865
No 340
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.70 E-value=7.5e-05 Score=90.31 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=77.7
Q ss_pred HHHHHHHHHH-hcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccC-------CCCcccHHHHHHHHHhhhc
Q 042007 134 EFSVGVFEAL-ARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKN-------GDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 134 ~~~~~lf~~l-~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d-------~dG~It~eEl~~il~~~~~ 205 (844)
.+..+.|..+ .| .|+||.|+++|+...+.. .+++++.+|+.+|.+ ++|.|+.+||.++++....
T Consensus 150 ~~L~kaf~~~~~D---~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~ 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQ---VNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL 221 (885)
T ss_dssp HHHHHHHHHHHHS---CCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCc---cCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC
Confidence 4566777753 23 577999999999988763 467899999999987 8899999999999975321
Q ss_pred cccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 206 ENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 206 ~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.++++.+|+.+|.|++|+||.+||..+|.+.
T Consensus 222 -----------R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~ 252 (885)
T 3ohm_B 222 -----------RPDIDKILLEIGAKGKPYLTLEQLMDFINQK 252 (885)
T ss_dssp -----------CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHhcCCCCccCHHHHHHHHHHh
Confidence 2457899999999999999999999999865
No 341
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=97.67 E-value=7.5e-05 Score=65.48 Aligned_cols=63 Identities=17% Similarity=0.266 Sum_probs=39.3
Q ss_pred HHHHHHHHhcccCCCC-CCceeHHHHHHHHHH-----hccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 136 SVGVFEALARRRKVNT-ENGITKEEVRMFWED-----MTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~-dG~I~f~EF~~~l~~-----~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
..++|+.+++ .|+ +|.|+.+||..++.. +.....++.++.+|+.+|.|+||.|+.+||..++.
T Consensus 11 l~~~F~~fD~---~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (95)
T 1j55_A 11 IIDVFSRYSG---SEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA 79 (95)
T ss_dssp HHHHHHHHTT---SSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHhc---cCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 4455664442 134 467888888777764 22233456777888888888888888888877774
No 342
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=97.67 E-value=6.8e-05 Score=68.46 Aligned_cols=60 Identities=22% Similarity=0.241 Sum_probs=39.8
Q ss_pred HHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
.+++|+.++ . +||.|+-+|...++... +.+++.|..++++.|.|+||+|+.+||..+|.+
T Consensus 35 y~~iF~~lD----~-~dG~Isg~elr~~~~~s--gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~L 94 (121)
T 3fia_A 35 HDQQFHSLK----P-ISGFITGDQARNFFFQS--GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKL 94 (121)
T ss_dssp HHHHHHHTC----C-BTTBEEHHHHHHHHGGG--CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhC----C-CCCeECHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 345566543 2 36777777777777653 345667777777777777777777777777654
No 343
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=97.58 E-value=0.00011 Score=64.45 Aligned_cols=64 Identities=22% Similarity=0.297 Sum_probs=44.7
Q ss_pred HHHHHHHHhcccCCCCCC-ceeHHHHHHHHH-Hhc----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 136 SVGVFEALARRRKVNTEN-GITKEEVRMFWE-DMT----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 136 ~~~lf~~l~~~~~~d~dG-~I~f~EF~~~l~-~~~----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
..++|..+++ .|+|| .|+.+||..++. .+. ....++.++.+|+.+|.|+||.|+.+||..++..
T Consensus 15 l~~~F~~~Dd---~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~ 84 (99)
T 1qls_A 15 LIAIFQKHAG---RDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG 84 (99)
T ss_dssp HHHHHHHHHT---TSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHh---cCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3455554442 24577 777777777775 232 3345667888899999999999999999888853
No 344
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.51 E-value=2.8e-05 Score=79.60 Aligned_cols=66 Identities=17% Similarity=0.082 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcc-CCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 173 DARLQIFFDMCDK-NGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 173 ~~~l~~~F~~fD~-d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
...+.++|..||. |+||+|+.+||+.++.... ..+..++.+|+..|.|+||.||++||...+....
T Consensus 154 ~~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~----------~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~~~ 220 (229)
T 1nub_A 154 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI----------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 220 (229)
T ss_dssp HHHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS----------TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTTCCG
T ss_pred hHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh----------hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhCCCc
Confidence 3468999999999 8999999999999874311 1334578899999999999999999999986443
No 345
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=97.48 E-value=0.00021 Score=67.21 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
....++|+.+| |+||.|+.+|+..+|.... ..++.+..+++..|.|+||+|+.+||..+|.
T Consensus 51 ~~l~~~F~~fD-----d~dG~Is~~El~~~l~~~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~ 111 (139)
T 2jq6_A 51 PTYDEIFYTLS-----PVNGKITGANAKKEMVKSK--LPNTVLGKIWKLADVDKDGLLDDEEFALANH 111 (139)
T ss_dssp HHHHHHHHHSC-----CSSSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhC-----CCCCeECHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 34455666433 3377777777777776532 4566777777788888888888888777764
No 346
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=97.48 E-value=0.00015 Score=64.97 Aligned_cols=49 Identities=16% Similarity=0.098 Sum_probs=28.3
Q ss_pred CceeHHHHHHHHHH-hccCC-hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 153 NGITKEEVRMFWED-MTKKD-LDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 153 G~I~f~EF~~~l~~-~~~~~-~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
|.|+.+||..++.. +.... .++.+..+|+.+|.|+||.|+.+||..++.
T Consensus 39 G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~ 89 (106)
T 2h2k_A 39 DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIG 89 (106)
T ss_dssp TEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 56666666666643 32211 124566666666666666666666666653
No 347
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=97.36 E-value=2.1e-05 Score=72.70 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=45.9
Q ss_pred HHHHHHcccCCCCcCHHHHhh-----ccCCCC-CHH---HHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHH
Q 042007 105 IERRFQQFAVSGRLPKDKFGI-----CVGMGE-STE---FSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDAR 175 (844)
Q Consensus 105 l~~~F~~ld~dG~is~~eF~~-----~lg~~~-~~~---~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~ 175 (844)
+.+.+... +|.|+.+||.. ++.... ... ...+.|+. . | |.|+.+|+..++..++. ++++
T Consensus 14 i~~~~~~~--~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~-f-----D--G~I~~~El~~~l~~lG~--t~~e 81 (123)
T 2kld_A 14 VKSDLAQQ--KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQ-G-----G--GKLNFDELRQDLKGKGH--TDAE 81 (123)
T ss_dssp ---------------------------------------CCSCSSTT-T-----T--TCEEHHHHHHHTTTCCS--SHHH
T ss_pred HHHHHHHc--CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHH-h-----C--CCCCHHHHHHHHHHhCC--CHHH
Confidence 44444443 89999999987 553211 111 12223431 1 2 99999999999987765 7889
Q ss_pred HHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 176 LQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 176 l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
++.+|+.+|.|+||.|+.+||..++.
T Consensus 82 i~~~~~~~D~d~dG~I~~~EF~~~~~ 107 (123)
T 2kld_A 82 IEAIFTKYDQDGDQELTEHEHQQMRD 107 (123)
T ss_dssp HHHHHHHHSSSSCCEECSHHHHHCSC
T ss_pred HHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 99999999999999999999988874
No 348
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.32 E-value=0.00021 Score=85.99 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=69.5
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHh-------ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMC-------DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAA 221 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~f-------D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~ 221 (844)
.|+||.|+++|+...+.... ..++++..+++.. |.+++|.|+.+||.++++.... .++++
T Consensus 166 ~n~dG~Is~kEl~~~l~~~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~-----------R~EI~ 232 (816)
T 3qr0_A 166 EMEKNKIPVKAIQKCLSKDK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE-----------RSEIE 232 (816)
T ss_dssp SCCSSEEEHHHHHHHHCSCH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC-----------CTHHH
T ss_pred CCCCCCCCHHHHHHHHHhcC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC-----------HHHHH
Confidence 57899999999998775322 2245688888888 6788999999999999975321 23578
Q ss_pred HHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 222 LIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 222 ~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.+|+.+|.|++|+||. ||..+|.+.-
T Consensus 233 eiF~~y~~dg~~~mT~-eL~~FL~~~Q 258 (816)
T 3qr0_A 233 GIFKELSKNKGNITTV-MFRDFLNDMQ 258 (816)
T ss_dssp HHHHHHTTTSSSEEHH-HHHHHHHHTS
T ss_pred HHHHHHccCCCCcccH-HHHHHHHHhC
Confidence 8999999999999999 9999998763
No 349
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=96.88 E-value=0.0021 Score=53.53 Aligned_cols=62 Identities=2% Similarity=-0.121 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccC-CCCCCceeHHHHHHHHH
Q 042007 98 ENDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRK-VNTENGITKEEVRMFWE 165 (844)
Q Consensus 98 ~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~-~d~dG~I~f~EF~~~l~ 165 (844)
..+++.+.++.| + +++|+|+.+|++.. -+.+.++++++.++..++ .+++|.|+|+||+..|.
T Consensus 8 ~~eel~eAFr~f-~-dg~G~It~~eLr~~----lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 8 TAEQVIASFRIL-A-SDKPYILAEELRRE----LPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp THHHHHHHHHHH-T-TSCSSBCHHHHHHH----SCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred CHHHHHHHHHHH-h-cCCCCcCHHHHHhc----CCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 456788888888 5 78999999999983 245667887776541221 13589999999988764
No 350
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=96.66 E-value=0.003 Score=57.26 Aligned_cols=86 Identities=5% Similarity=0.070 Sum_probs=62.5
Q ss_pred CCceeHHHHHHHHHHhccCChHHHHHHHHHHh-c-----cCCCCcccHHHHHHHHHhhhcccccccccc-chHHHHHHHH
Q 042007 152 ENGITKEEVRMFWEDMTKKDLDARLQIFFDMC-D-----KNGDGILTEDEVREVIVLSASENKLSNLKE-NSSTYAALIM 224 (844)
Q Consensus 152 dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~f-D-----~d~dG~It~eEl~~il~~~~~~~~l~~~~~-~~~e~~~~if 224 (844)
.+.++.+||.++.....- .+.+|+..++-| | ...+|.|+.++|+.+++.-.. .. ...+.+..+|
T Consensus 5 ~s~lspe~l~~L~~~t~f--s~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp-------~~~~p~~~~~~lF 75 (118)
T 1tuz_A 5 RGLISPSDFAQLQKYMEY--STKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLE-------VDNVPRHLSLALF 75 (118)
T ss_dssp CSCSCHHHHHHHHHHHHH--CCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTT-------CSSCCHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHccc--CHHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCc-------CCCCHHHHHHHHH
Confidence 456888888887654321 122455555555 3 346899999999999976442 22 4578899999
Q ss_pred HHhCCCC--------CCceeHHHHHHHHHc
Q 042007 225 EKLDPDC--------KGYIEMWQLEILLRG 246 (844)
Q Consensus 225 ~~~D~d~--------dG~It~~EF~~ll~~ 246 (844)
..+|.|+ +|.|+|.||.-.|.-
T Consensus 76 ~~Fd~~~~~~~~~~~~g~I~fkefi~~LSl 105 (118)
T 1tuz_A 76 QSFETGHCLNETNVTKDVVCLNDVSCYFSL 105 (118)
T ss_dssp HHSCCCCCTTCCCCCSCCEEHHHHHHHHHH
T ss_pred HHHhcccccccccCCCCeEeHHHHHHHHHH
Confidence 9999985 899999999887753
No 351
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=96.58 E-value=0.00052 Score=64.82 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=48.4
Q ss_pred HHHHHHHHHhcccCCC-CCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 135 FSVGVFEALARRRKVN-TENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~d-~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.+.-.|..+| .| +||.|+..|+..+...+. ..+..+..+|+.+|.|+||+||.+|+.+.+.
T Consensus 78 ~l~W~F~~lD----~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 78 PVHWQFGQLD----QHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHHC----CTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred HHHhHHHHHC----CCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 3555677555 55 799999999988775442 5667799999999999999999999988774
No 352
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=94.47 E-value=0.012 Score=60.08 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=49.1
Q ss_pred HHHHHHHHHhcccCC-CCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 135 FSVGVFEALARRRKV-NTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 135 ~~~~lf~~l~~~~~~-d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.+.-+|..|| . |+||.|+..|+..+...+. ..+.-++.+|+..|.|+||+||.+|+...+.
T Consensus 156 ~v~w~F~~lD----~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 156 PVHWQFGQLD----QHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHT----TTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred HHHHHHHHhC----CCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 4666787666 5 6799999999998875443 2456688999999999999999999988774
No 353
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=88.34 E-value=1 Score=51.99 Aligned_cols=87 Identities=15% Similarity=0.185 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCCC
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNEE 251 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~~ 251 (844)
...+...+|...|. .+|+|+-++.+.++..+ +|. .+.+.+|.+-.|.|+||+++.+||.-+|.=...-.
T Consensus 456 ~~~~y~~~F~~~~~-~~g~i~g~~a~~~~~~s----~Lp------~~~L~~IW~l~D~~~~g~L~~~eF~~am~Li~~~~ 524 (550)
T 2qpt_A 456 DKSKYDEIFYNLAP-ADGKLSGSKAKTWMVGT----KLP------NSVLGRIWKLSDVDRDGMLDDEEFALASHLIEAKL 524 (550)
T ss_dssp THHHHHHHHHHTCC-SSSEECHHHHHHHHHHT----TCC------HHHHHHHHHHHCSSCSSSEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCeecHHHHHHHHHHc----CCC------HHHHHHHhcccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 45678899999995 46999999999999542 232 45678899999999999999999998886332110
Q ss_pred CCCCCccccchhhcccCCCC
Q 042007 252 GPKMNNRTSTLTKAMIPQNY 271 (844)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~ 271 (844)
....| ...+...|.|...
T Consensus 525 -~g~~l-P~~lp~~l~p~s~ 542 (550)
T 2qpt_A 525 -EGHGL-PTNLPRRLVPPSK 542 (550)
T ss_dssp -HSCCC-CSSCCGGGSCSSC
T ss_pred -cCCCC-CCCCCcccCChhh
Confidence 11345 5556666666533
No 354
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=86.10 E-value=1.2 Score=37.78 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=36.8
Q ss_pred HhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 042007 182 MCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEIL 243 (844)
Q Consensus 182 ~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~l 243 (844)
.=|.|+||.|+..++..+.+-........ . . +.-++.+|.|+||.|+-.++..+
T Consensus 22 ~GDvNgDG~Vn~~D~~llk~yllg~~~~~--~--~----~~~~~aADvNgDG~In~~D~~~l 75 (88)
T 4fl4_A 22 MGDVNDDGKVNSTDLTLLKRYVLKAVSTL--P--S----SKAEKNADVNRDGRVNSSDVTIL 75 (88)
T ss_dssp TTCTTCSSCCSHHHHHHHHHHHHTSSCCC--S--S----HHHHHHHCTTCSSCCSHHHHHHH
T ss_pred cccCCCCCcCCHHHHHHHHHHHcCCCCCC--c--h----hhhhhhccccCCCCcCHHHHHHH
Confidence 34899999999999887665443322221 0 0 12356799999999998888654
No 355
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=84.98 E-value=0.81 Score=41.85 Aligned_cols=51 Identities=24% Similarity=0.373 Sum_probs=40.6
Q ss_pred HHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCCC
Q 042007 180 FDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNEE 251 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~~ 251 (844)
|+....+.+.-|++++|.++. +...++|+++.|+|.+.++..++.+.+...
T Consensus 26 F~~~~~~~~~~l~~~dl~~F~---------------------~~W~~fDP~aTg~I~~~~L~~ll~~L~pPL 76 (129)
T 2kav_A 26 FSVATEESAEPLSEDDFEMFY---------------------EVWEKFDPDATQFIEFAKLSDFADALDPPL 76 (129)
T ss_dssp SCCTTSSCSCSSCHHHHHHHH---------------------HHHHHHCTTCCCEECGGGHHHHHHHSCTTS
T ss_pred HHHHHHhhccCCCHHHHHHHH---------------------HHHHhcCCCCceEEeHHHHHHHHHhCCccc
Confidence 555556666678888887766 478899999999999999999998886443
No 356
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=83.53 E-value=2.8 Score=39.24 Aligned_cols=29 Identities=28% Similarity=0.310 Sum_probs=18.8
Q ss_pred HHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 174 ARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
+.++.+|+.+|.|+||-|+.+|-..+|+.
T Consensus 15 eAi~~~H~~lDdD~dG~Id~~Es~~Flre 43 (150)
T 2l5y_A 15 EALQTIHKQMDDDKDGGIEVEESDEFIRE 43 (150)
T ss_dssp HHHHHHHHHHSSSCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCcHHHHHHHHHH
Confidence 34566666666666677766666666654
No 357
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=83.15 E-value=2 Score=35.94 Aligned_cols=52 Identities=15% Similarity=-0.045 Sum_probs=35.2
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEIL 243 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~l 243 (844)
|.|+||.|+..++..+.+-....... .+.+ .-.+.+|.|+||.|+-.++..+
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~-~~~~-------~~~~~ADvngDG~In~~D~~~l 60 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIAD-FPAD-------DDMWVGDVNGDNVINDIDCNYL 60 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSS-CSSS-------CHHHHHCSSSSSCCSHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCcc-Cccc-------cchhheeccCCCcCCHHHHHHH
Confidence 88999999999988766543321110 0011 1256789999999999888644
No 358
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=78.28 E-value=2.5 Score=48.66 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 132 STEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 132 ~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
++..-.++|+.++ +.+|.|+=++-..++.+ .+.+.+.|..+.++.|.|+||+++.+||.-.|.+
T Consensus 456 ~~~~y~~~F~~~~-----~~~g~i~g~~a~~~~~~--s~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L 519 (550)
T 2qpt_A 456 DKSKYDEIFYNLA-----PADGKLSGSKAKTWMVG--TKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHL 519 (550)
T ss_dssp THHHHHHHHHHTC-----CSSSEECHHHHHHHHHH--TTCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----CCCCeecHHHHHHHHHH--cCCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence 3444555666554 22577777777777753 3567777778888888888888888888766644
No 359
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=77.60 E-value=5.1 Score=31.57 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=35.4
Q ss_pred hccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 183 CDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 183 fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
=|.|+||.|+.-++..+-+-......+. + .-++.+|.|+||.|+-.+|..+-
T Consensus 5 GDvN~DG~vn~~D~~~l~~yllg~~~~~------~----~~~~~aDvn~DG~in~~D~~~l~ 56 (63)
T 2ccl_B 5 GDVNGDGTINSTDLTMLKRSVLRAITLT------D----DAKARADVDKNGSINAADVLLLS 56 (63)
T ss_dssp TCTTCSSSCCHHHHHHHHHHHTTSSCCC------H----HHHHHHCTTCSSCCSHHHHHHHH
T ss_pred cccCCCCcCCHHHHHHHHHHHcCCCccc------c----chhhhhccCCCCCccHHHHHHHH
Confidence 3889999999999866544332222111 1 12567999999999998886554
No 360
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=74.72 E-value=2.3 Score=33.90 Aligned_cols=49 Identities=20% Similarity=0.190 Sum_probs=34.6
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHH
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEIL 243 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~l 243 (844)
|.|+||.|+..++..+-+-........ + . .+.+|.|+||.|+-.++..+
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~~~---~-------~-~~~ADvn~DG~In~~D~~~l 55 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNKLV---I-------D-LNVADVNKDGKVNSTDCLFL 55 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSSCC---C-------C-GGGCCTTCSSCCSHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCCCc---h-------H-HHhccccCCCCCCHHHHHHH
Confidence 789999999999876665433322111 1 1 46799999999998888644
No 361
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=74.69 E-value=8.1 Score=34.91 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhccCCC---CcccHHHHHHHHHhhhcc--ccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGD---GILTEDEVREVIVLSASE--NKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~d---G~It~eEl~~il~~~~~~--~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
.+.|+.+|..|=.-|+ ..|+-..|..+++.+.-- .++ ....++.+|..+ ..+...|+|+||++.|...
T Consensus 21 ~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~i------T~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~l 93 (125)
T 1pul_A 21 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAI------TGTMTGIAFSKV-TGPKKKATFDETKKVLAFV 93 (125)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSS------CHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCC------Cccccceeehcc-cCCcceecHHHHHHHHHHH
Confidence 4456666766655443 578888888888754321 223 356788999999 7778889999999999765
Q ss_pred C
Q 042007 248 V 248 (844)
Q Consensus 248 ~ 248 (844)
.
T Consensus 94 A 94 (125)
T 1pul_A 94 A 94 (125)
T ss_dssp H
T ss_pred H
Confidence 3
No 362
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=73.90 E-value=2.4 Score=39.61 Aligned_cols=63 Identities=10% Similarity=0.079 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 173 DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 173 ~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
-+.++.+|+.+|.|+||-|+..|-..+|+..+.. . +.... . +.|+. +|..||.+|+.+.+..-
T Consensus 14 ~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~---~---d~~~~--~---~~fh~-~D~~Isv~eLw~~W~~s 76 (150)
T 2k60_A 14 FEAVRNIHKLMDDDANGDVDVEESDEFLREDLNY---H---DPTVK--H---STFHG-EDKLISVEDLWKAWKSS 76 (150)
T ss_dssp HHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTS---S---CTHHH--H---HHHTS-SSCCEEHHHHHHHHHHS
T ss_pred hHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhcc---c---cchhh--h---hcccC-CCCeeeHHHHHHHhccC
Confidence 4567788888899999999988888888653321 1 11111 1 23443 56789988888877543
No 363
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=70.54 E-value=4.3 Score=38.72 Aligned_cols=47 Identities=23% Similarity=0.343 Sum_probs=36.9
Q ss_pred hccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCCCC
Q 042007 183 CDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMVNE 250 (844)
Q Consensus 183 fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~~~ 250 (844)
.-.|...-|+.++|..+. .+..++|+++.|+|.+.++..++...+..
T Consensus 6 ~t~d~~~~L~~~dl~~F~---------------------~~W~~fDP~ATgfI~~~~L~~~l~~L~pP 52 (168)
T 4dck_A 6 ATEESTEPLSEDDFDMFY---------------------EIWEKFDPEATQFIEYSVLSDFADALSEP 52 (168)
T ss_dssp CCTTCSSCBCHHHHHHHH---------------------HHHHHHCTTCCSEEEGGGHHHHHHHSCTT
T ss_pred hhhccccCCCHHHHHHHH---------------------HHHHHhCCCCcceeeHHHHHHHHHhcCCC
Confidence 334455567777777666 47889999999999999999999988644
No 364
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=70.14 E-value=3.4 Score=35.05 Aligned_cols=50 Identities=16% Similarity=0.188 Sum_probs=36.0
Q ss_pred CCCCCCceeHHHHHHHHHHhccCC----hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 148 KVNTENGITKEEVRMFWEDMTKKD----LDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 148 ~~d~dG~I~f~EF~~~l~~~~~~~----~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+.|+||.|+-.++..+...+.... .++. ...-|.|+||.|+..++..+-+
T Consensus 24 DvNgDG~Vn~~D~~llk~yllg~~~~~~~~~~----~~aADvNgDG~In~~D~~~lkk 77 (88)
T 4fl4_A 24 DVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKA----EKNADVNRDGRVNSSDVTILSR 77 (88)
T ss_dssp CTTCSSCCSHHHHHHHHHHHHTSSCCCSSHHH----HHHHCTTCSSCCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHcCCCCCCchhhh----hhhccccCCCCcCHHHHHHHHH
Confidence 378999999999988776554321 1222 3467999999999999876544
No 365
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=70.02 E-value=38 Score=30.50 Aligned_cols=70 Identities=17% Similarity=0.146 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc
Q 042007 134 EFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 134 ~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~ 205 (844)
...+++|..+....+ -+...|+-..|.+.+.... ..-+......+|..+ ..+..+|+.+||.+.|...+.
T Consensus 22 ~~L~~~F~~Fa~fG~-~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA~ 95 (125)
T 1pul_A 22 ADVKKRWDAFTKFGA-ATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVAE 95 (125)
T ss_dssp HHHHHHHHHHHHHTC-SSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHHH
Confidence 446677776664332 2235588888888886532 334567888999999 777889999999999976554
No 366
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=67.27 E-value=12 Score=36.20 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=51.4
Q ss_pred HHHHHHHHHhccCCCC-----cccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 174 ARLQIFFDMCDKNGDG-----ILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 174 ~~l~~~F~~fD~d~dG-----~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
+.|+.+|..|=.-+++ .|+-..|..+++.+..-+. +......++.+|..+-..+...|+|++|+++|....
T Consensus 8 ~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDg----k~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA 83 (184)
T 2jrf_A 8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADG----KSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELA 83 (184)
T ss_dssp SHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCS----SSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccC----CCCChhhcchhhheeccCcceeecHHHHHHHHHHHH
Confidence 3577778777665543 5888899998876532210 122356788999999877888899999999997663
No 367
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=66.72 E-value=6.3 Score=31.17 Aligned_cols=48 Identities=19% Similarity=0.276 Sum_probs=32.8
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
|.|+||.|+.-++..+-+-........ + +.+|.|+||.|+-.+|..+-
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~------~-------~~aDvn~DG~in~~D~~~l~ 53 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAY------V-------KNLDVNLDNEVNAFDLAILK 53 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCC------C-------GGGCTTCSSCCSHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccc------h-------hhhcccCCCcccHHHHHHHH
Confidence 789999999988866543322211111 0 56899999999988886543
No 368
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=64.45 E-value=19 Score=33.63 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=50.1
Q ss_pred HHHHHHHHhccCCC-----CcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcCC
Q 042007 175 RLQIFFDMCDKNGD-----GILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGMV 248 (844)
Q Consensus 175 ~l~~~F~~fD~d~d-----G~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~~ 248 (844)
.|+.+|..|=.-|+ ..|+-..|..+++.+..-+ -+......++.+|..+-..+...|+|++|++.|...-
T Consensus 16 ~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lid----gk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA 90 (151)
T 1wlm_A 16 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVAD----GKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELA 90 (151)
T ss_dssp SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCC----SSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTH
T ss_pred HHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCc----CCCCChhhcceehheeccCccceecHHHHHHHHHHHH
Confidence 46667777766544 3588888888887643221 0122356788999999877788899999999998764
No 369
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=62.38 E-value=3.7 Score=34.37 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=35.9
Q ss_pred CCCCCceeHHHHHHHHHHhccCC----hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKD----LDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~----~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.|+||.|+-.++..+...+.... .++. ...-|.|+||.|+..++..+-+
T Consensus 10 vN~DG~Vn~~D~~llk~yllg~~~~~~~~~~----~~~ADvngDG~In~~D~~~lk~ 62 (82)
T 4dh2_B 10 VNADGVVNISDYVLMKRYILRIIADFPADDD----MWVGDVNGDNVINDIDCNYLKR 62 (82)
T ss_dssp TTCSSSCSHHHHHHHHHHHTTSSSSCSSSCH----HHHHCSSSSSCCSHHHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHHHcCCCccCccccc----hhheeccCCCcCCHHHHHHHHH
Confidence 78999999999988877654321 1111 3466999999999999876554
No 370
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=57.92 E-value=8.9 Score=30.98 Aligned_cols=51 Identities=27% Similarity=0.258 Sum_probs=33.3
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHH
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLR 245 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~ 245 (844)
|.|+||.|+..++..+-+-.. ++..... .. +.+|.|+||.|+-.+|..+-+
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~---~lg~~~~-----~~---~~aDvN~DG~in~~D~~~l~~ 58 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFG---KAIGNPG-----VN---EKADLNNDGVINSDDAIILAQ 58 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTT---CBC--------------CTTCTTCSSBCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHH---HhCCCcC-----CC---ccccccCCCcccHHHHHHHHH
Confidence 889999999999876543221 0110010 11 678999999999998866554
No 371
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=53.65 E-value=1.7e+02 Score=30.39 Aligned_cols=139 Identities=12% Similarity=0.090 Sum_probs=82.5
Q ss_pred ccCCCchhhhhhhhhhhhhhccCCCchHHHHHHHHHHHcccCCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCC
Q 042007 73 MDRTASSAARGLQSLRFLDRTVTGKENDAWRSIERRFQQFAVSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTE 152 (844)
Q Consensus 73 ~~~~~s~a~~~l~~l~~i~~~~~~~~~~~~~~l~~~F~~ld~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~d 152 (844)
+=+..|.....|-.|.-|-. -...|+...|- +|+..-+.|+ + .+..+.+....-+. +.
T Consensus 103 ~f~e~S~~RR~L~KlsLiFS-------HMlaEL~AlFP----~G~f~g~~y~----i--tk~~A~~FWk~~FG-----~r 160 (323)
T 3op0_A 103 LFRAGSRLRRQLAKLAIIFS-------HMHAELHALFP----GGKYCGHMYQ----L--TKAPAHTFWRESCG-----AR 160 (323)
T ss_dssp GGSTTBHHHHHHHHHHHHHH-------HHHHHHHHHSG----GGCCCTTTCC----C--SSHHHHHHHHHHHT-----TC
T ss_pred hhccccHHHHHHHHHHHHHH-------HHHHHHHhhCC----CCEecCCceE----E--cChHHHHHHHHhcC-----CC
Confidence 33445544444444443322 14556666663 4555544443 2 34456666554342 13
Q ss_pred CceeHHHHHHHHHHhccCCh---HHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC
Q 042007 153 NGITKEEVRMFWEDMTKKDL---DARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP 229 (844)
Q Consensus 153 G~I~f~EF~~~l~~~~~~~~---~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~ 229 (844)
-.|..++|...+......+. ...|+ .+.|.-.||+||..||..+.+.-.....+ -......-.
T Consensus 161 ~iVpW~~F~~~l~~~~~i~s~~~~~aLk---~tiDlT~~~~VSifeFdvFtrlFqPw~~l-----------L~nw~~lav 226 (323)
T 3op0_A 161 CVLPWAEFESLLGTCHPVEPGATALALR---TTIDLTCSGHVSIFEFDVFTRLFQPWPTL-----------LKNWQLLAV 226 (323)
T ss_dssp SEEEHHHHHHHHHTTSCCCTTHHHHHHH---HHHCTTCSSEEEHHHHHHHHHHTCCGGGH-----------HHHHHHHTT
T ss_pred ceecHHHHHHHHHHhcCCCCcchHHHHH---HhcccccCCceeeeecchHHHhhCcCHHH-----------hhhHHHHhh
Confidence 34999999999987654332 33455 67788899999999999998765432211 123444444
Q ss_pred CCCC---ceeHHHHHHHHHcC
Q 042007 230 DCKG---YIEMWQLEILLRGM 247 (844)
Q Consensus 230 d~dG---~It~~EF~~ll~~~ 247 (844)
+.-| .|||+|-.+.|...
T Consensus 227 ~hpGy~aFlTydEV~~~L~~~ 247 (323)
T 3op0_A 227 NHPGYMAFLTYDEVQERLQAC 247 (323)
T ss_dssp TCTTBCTTCCHHHHHHHTTGG
T ss_pred cCcceeeeeeHHHHHHHHHHh
Confidence 5555 49999999999844
No 372
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=52.61 E-value=30 Score=33.33 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcccC--C--CCcCHHHHhhcc---CCC----CCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc
Q 042007 100 DAWRSIERRFQQFAV--S--GRLPKDKFGICV---GMG----ESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT 168 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~--d--G~is~~eF~~~l---g~~----~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~ 168 (844)
.++++++..|..+-. . ..++-..|.+++ ++- -....++-+|.-+. ..+...|+|++|.++|..+.
T Consensus 8 ~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK----~k~~rkI~feqF~~aL~~lA 83 (184)
T 2jrf_A 8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVK----GKSARVINYEEFKKALEELA 83 (184)
T ss_dssp SHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHC----CSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheec----cCcceeecHHHHHHHHHHHH
Confidence 456667777766541 1 358888888777 332 33445666666543 23467799999999998765
No 373
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=51.33 E-value=16 Score=29.47 Aligned_cols=50 Identities=16% Similarity=0.296 Sum_probs=34.5
Q ss_pred CCCCCCceeHHHHHHHHHHh--ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 148 KVNTENGITKEEVRMFWEDM--TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 148 ~~d~dG~I~f~EF~~~l~~~--~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
+.|+||.|+-.++..+-..+ ..... ... ..-|.|+||.|+..++..+-+.
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~~--~~~---~~aDvN~DG~in~~D~~~l~~~ 59 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGNP--GVN---EKADLNNDGVINSDDAIILAQY 59 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC-----------CTTCTTCSSBCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCCc--CCC---ccccccCCCcccHHHHHHHHHH
Confidence 37889999999998776554 22111 111 6789999999999998766543
No 374
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=48.76 E-value=24 Score=33.59 Aligned_cols=61 Identities=5% Similarity=0.072 Sum_probs=40.8
Q ss_pred HHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCC--CCCCceeHHHHHHHHHcC
Q 042007 180 FDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDP--DCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 180 F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~--d~dG~It~~EF~~ll~~~ 247 (844)
...||.++.|+|...+|..++..+..--++.++. ...+..+|. ..+|.|-|-+-...|.+.
T Consensus 26 W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~kPn-------~~~L~~mdiPl~~~~~Vhf~dvL~ALtk~ 88 (168)
T 4dck_A 26 WEKFDPEATQFIEYSVLSDFADALSEPLRIAKPN-------QISLINMDLPMVSGDRIHCMDILFAFTKR 88 (168)
T ss_dssp HHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCSSC-------HHHHHHSCCEEETTTEEEHHHHHHHHHHH
T ss_pred HHHhCCCCcceeeHHHHHHHHHhcCCCCcCCCCC-------HHHHHHcCCCcCCCCEEeHHHHHHHHHHH
Confidence 4568999999999999999997643322232211 122566776 667889988877766543
No 375
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=48.71 E-value=1.7e+02 Score=27.18 Aligned_cols=52 Identities=12% Similarity=0.198 Sum_probs=35.8
Q ss_pred ceeHHHHHHHHHHhc----cCChHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhc
Q 042007 154 GITKEEVRMFWEDMT----KKDLDARLQIFFDMCDKNGDGILTEDEVREVIVLSAS 205 (844)
Q Consensus 154 ~I~f~EF~~~l~~~~----~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~ 205 (844)
.++-..|.+++.... ..-+...+..+|.-+-..+..+|+.++|++.|..++.
T Consensus 36 ~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA~ 91 (151)
T 1wlm_A 36 EMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELAT 91 (151)
T ss_dssp EEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHH
T ss_pred cCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHHHH
Confidence 466777777775432 2345567788888886666788999998888865443
No 376
>1daq_A Endoglucanase SS, CELS; cellulose degradation, cellulosome, calcium-binding, hydrolase; NMR {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1dav_A
Probab=47.17 E-value=15 Score=29.69 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=32.1
Q ss_pred ccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHH
Q 042007 184 DKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILL 244 (844)
Q Consensus 184 D~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll 244 (844)
|.|+||.|+..++..+-+-........ -++..|.|+||.|+-.+|..+-
T Consensus 8 DvN~Dg~vn~~D~~~l~~yllg~~~~~------------~~~~aDvn~DG~in~~D~~~l~ 56 (71)
T 1daq_A 8 DVNDDGKVNSTDAVALKRYVLRSGISI------------NTDNADLNEDGRVNSTDLGILK 56 (71)
T ss_dssp CSSSSSCSSGGGHHHHHHHHHCSCSCC------------CGGGTCSSSSSSCSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHcCCCccc------------cchhhcccCCCcccHHHHHHHH
Confidence 788999999888765543222211100 0356899999998888886544
No 377
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=45.62 E-value=28 Score=27.19 Aligned_cols=50 Identities=16% Similarity=0.206 Sum_probs=34.9
Q ss_pred CCCCCCceeHHHHHHHHHHhccC--ChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 148 KVNTENGITKEEVRMFWEDMTKK--DLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 148 ~~d~dG~I~f~EF~~~l~~~~~~--~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+.|+||.|+-.+|..+-..+... ..++. ...-|.|+||.|+..++..+-+
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~~~----~~~aDvn~DG~in~~D~~~l~~ 57 (63)
T 2ccl_B 6 DVNGDGTINSTDLTMLKRSVLRAITLTDDA----KARADVDKNGSINAADVLLLSR 57 (63)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHH----HHHHCTTCSSCCSHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccccch----hhhhccCCCCCccHHHHHHHHH
Confidence 37889999999997765544322 12222 3567999999999999876543
No 378
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=42.29 E-value=15 Score=29.19 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=35.6
Q ss_pred CCCCCceeHHHHHHHHHHhccCC-hHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKD-LDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~-~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.|+||.|+-.++..+...+.... ..+ . ...-|.|+||.|+..++..+-+
T Consensus 8 vN~DG~Vn~~D~~llk~yllg~~~~~~---~-~~~ADvn~DG~In~~D~~~lk~ 57 (65)
T 3ul4_B 8 LNRNGIVNDEDYILLKNYLLRGNKLVI---D-LNVADVNKDGKVNSTDCLFLKK 57 (65)
T ss_dssp TTCSSCCSHHHHHHHHHHHTTCSSCCC---C-GGGCCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHCCCCCCch---H-HHhccccCCCCCCHHHHHHHHH
Confidence 78999999999988776654321 111 1 4678999999999999865443
No 379
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=42.26 E-value=13 Score=38.98 Aligned_cols=54 Identities=24% Similarity=0.222 Sum_probs=38.8
Q ss_pred hccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHcC
Q 042007 183 CDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRGM 247 (844)
Q Consensus 183 fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~~ 247 (844)
-|.|+||.|+.+++.++.+......... .-.+.+|.|+||.|+.+|..-+-+.+
T Consensus 250 GDvn~D~~i~i~D~~~i~~~~~~~~~~~-----------~~~~~~DlN~DG~in~~Di~~v~k~f 303 (321)
T 3kcp_A 250 GDIVKDNSINLLDVAEVIRCFNATKGSA-----------NYVEELDINRNGAINMQDIMIVHKHF 303 (321)
T ss_dssp EECSSSSBCCHHHHHHHHTTTTCBTTST-----------TCCGGGCTTCSSBCSHHHHHHHHTTT
T ss_pred ccccCCCcccHHHHHHHHHHhccccCCc-----------cccccccccccCcccHHHHHHHHHHh
Confidence 4889999999999999886543211100 01256899999999999987666544
No 380
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=41.84 E-value=19 Score=28.34 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=33.1
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
.|+||.|+-.+|..+-..+........ ..-|.|+||.|+..++..+-+
T Consensus 7 vN~DG~vn~~D~~~l~~yllg~~~~~~-----~~aDvn~DG~in~~D~~~l~~ 54 (64)
T 2vn6_B 7 YNNDGNVDSTDFAGLKKYIMAADHAYV-----KNLDVNLDNEVNAFDLAILKK 54 (64)
T ss_dssp TTSSSCCSHHHHHHHHHHHHSTTCCCC-----GGGCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHccCCccch-----hhhcccCCCcccHHHHHHHHH
Confidence 688999999998766544322111000 577999999999999865554
No 381
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=41.29 E-value=52 Score=29.82 Aligned_cols=62 Identities=5% Similarity=0.061 Sum_probs=41.6
Q ss_pred HHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCC--CCCceeHHHHHHHHHcC
Q 042007 179 FFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPD--CKGYIEMWQLEILLRGM 247 (844)
Q Consensus 179 ~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d--~dG~It~~EF~~ll~~~ 247 (844)
++..||.++.|+|+..+|.+++..+..--++.++.. ..+..+|.- .+|.|-|-|....|.+.
T Consensus 48 ~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~kpnr-------~~L~~mniPl~~g~~Vhf~dvL~ALtr~ 111 (129)
T 2kav_A 48 VWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNK-------VQLIAMDLPMVSGDRIHCLDILFAFTKR 111 (129)
T ss_dssp HHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCTTCC-------HHHHHTCCCEETTTEEEHHHHHHHHHHH
T ss_pred HHHhcCCCCceEEeHHHHHHHHHhCCccccCCCccH-------HHHHHcCCccCCCCEEeHHHHHHHHHHH
Confidence 456799999999999999999976543223332111 124467763 56689988887777544
No 382
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=39.11 E-value=3.5e+02 Score=28.14 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=73.3
Q ss_pred CCCCcCHHHHhhccCCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCCh---HHHHHHHHHHhccCCCCc
Q 042007 114 VSGRLPKDKFGICVGMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDL---DARLQIFFDMCDKNGDGI 190 (844)
Q Consensus 114 ~dG~is~~eF~~~lg~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~---~~~l~~~F~~fD~d~dG~ 190 (844)
++|...-+.|+ -.+..+.+....-+. + .-.|...+|...+......+. ...++. ..|.-.|++
T Consensus 148 P~G~f~g~~fr------ItK~~A~eFW~~~FG----~-r~iVpW~~F~~~L~~~~~i~sg~~~laLK~---tiDlT~~d~ 213 (329)
T 3bux_B 148 PSGLFQGDTFR------ITKADAAEFWRKAFG----E-KTIVPWKSFRQALHEVHPISSGLEAMALKS---TIDLTCNDY 213 (329)
T ss_dssp GGGSCCGGGCC------CSSHHHHHHHHHHHT----T-CSEEEHHHHHHHHHHHSCCCCHHHHHHHHH---HHCTTCSSE
T ss_pred CCCeecCCcee------ecChHHHHHHHHhCC----C-CcCCcHHHHHHHHHHhCCCCCCchhhhhhh---eeCCCcCCc
Confidence 44555555552 234557776665552 1 334899999999988654332 234554 778888999
Q ss_pred ccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCC---ceeHHHHHHHHHcC
Q 042007 191 LTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKG---YIEMWQLEILLRGM 247 (844)
Q Consensus 191 It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG---~It~~EF~~ll~~~ 247 (844)
||..||..+++.-...+.+- ..++.+-....| .|||+|-.+.|..+
T Consensus 214 VSifeFdvFtr~FqPw~~ll-----------~nw~~la~~hpGy~aFlTydEv~~~L~~~ 262 (329)
T 3bux_B 214 ISVFEFDIFTRLFQPWSSLL-----------RNWNSLAVTHPGYMAFLTYDEVKARLQKF 262 (329)
T ss_dssp EEHHHHHHHHHHTCCGGGHH-----------HHHHHHTTSCTTBCTTCCHHHHHHHHGGG
T ss_pred eeeeecccHHHhhCchHHHH-----------HHHHHHHhcCcchhheeeHHHHHHHHHHh
Confidence 99999999998654332221 244556777888 79999999999874
No 383
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=38.01 E-value=82 Score=29.28 Aligned_cols=48 Identities=19% Similarity=0.189 Sum_probs=27.5
Q ss_pred CCCCceeHHHHHHHHHHh-ccCChHHHHHHHHHHhccCCCCcccHHHHHHHHHh
Q 042007 150 NTENGITKEEVRMFWEDM-TKKDLDARLQIFFDMCDKNGDGILTEDEVREVIVL 202 (844)
Q Consensus 150 d~dG~I~f~EF~~~l~~~-~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~~ 202 (844)
|.||.|+..|=..++..- ...+..++- + .|+ .+|..||.+||-+....
T Consensus 27 D~dG~Id~~Es~~Flre~~~~~d~~~k~---~-~~h-~~D~~Isv~eLw~~W~~ 75 (150)
T 2l5y_A 27 DKDGGIEVEESDEFIREDMKYKDATNKH---S-HLH-REDKHITIEDLWKRWKT 75 (150)
T ss_dssp SCSSCBCHHHHHHHHHHHTTTTCSHHHH---H-HHT-TTCCCBCHHHHHHHHHT
T ss_pred CCCCCCcHHHHHHHHHHHhcccCchhHH---h-hhc-CCCCeeeHHHHHHHHcc
Confidence 567777777777777542 222222221 1 223 24678888888776643
No 384
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=32.28 E-value=62 Score=26.29 Aligned_cols=52 Identities=10% Similarity=-0.053 Sum_probs=34.6
Q ss_pred HHHHHHHHHhccCChHHHHHHHHHHhccCCC--CcccHHHHHHHHHhhhccccc
Q 042007 158 EEVRMFWEDMTKKDLDARLQIFFDMCDKNGD--GILTEDEVREVIVLSASENKL 209 (844)
Q Consensus 158 ~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~d--G~It~eEl~~il~~~~~~~~l 209 (844)
..|+..|-.=...-+=+++..+.+||=..+- +.||.+||++.+.......++
T Consensus 10 w~yI~GMLtN~~slpl~RIh~mLkmf~~~~~~~~~it~~eL~~fL~~~v~e~kL 63 (74)
T 1ldd_A 10 LPFIEGMLTNLGAMKLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLADEGRL 63 (74)
T ss_dssp HHHHHHHHHHHCSEEHHHHHHHHHHHSCGGGCCTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhCCCCCCCCcCCHHHHHHHHHHHHhCCeE
Confidence 3455444322244567899999999976544 358999999999765554444
No 385
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=31.70 E-value=4.3e+02 Score=26.91 Aligned_cols=63 Identities=8% Similarity=0.056 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcccCCCCcCHHHHhhc---cCCCCCHHHHHHHHHHHhcccCCCCC-CceeHHHHHHHHHHhcc
Q 042007 100 DAWRSIERRFQQFAVSGRLPKDKFGIC---VGMGESTEFSVGVFEALARRRKVNTE-NGITKEEVRMFWEDMTK 169 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~dG~is~~eF~~~---lg~~~~~~~~~~lf~~l~~~~~~d~d-G~I~f~EF~~~l~~~~~ 169 (844)
..+++++..|. .++.|..+-+.+. ||..++....--+--.|. ...- |.++.+||+..|..+.-
T Consensus 74 ~~l~~lF~~Y~---~~d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~----a~~~~g~ftr~ef~~G~~~l~~ 140 (270)
T 3bq3_A 74 KELTQVFEHYI---NNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLG----YKKLEEPLKREDFLSTWFMQGC 140 (270)
T ss_dssp HHHHHHHHHHC---BTTBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTT----CSCTTSCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhc---CCCccCHhhHHHHHHHcCCChhhHHHHHHHHHcC----CCccCceeeHHHHHHHHHHhCC
Confidence 44555555554 4678887766555 477754432222222122 2345 99999999999977653
No 386
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=31.61 E-value=92 Score=34.72 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=40.6
Q ss_pred HHHHHHHhcccCCCCCCceeHHHHHHHHHHhccCChHHHHHHHHH----HhccCCCC-cccHHHHHHHHH
Q 042007 137 VGVFEALARRRKVNTENGITKEEVRMFWEDMTKKDLDARLQIFFD----MCDKNGDG-ILTEDEVREVIV 201 (844)
Q Consensus 137 ~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~----~fD~d~dG-~It~eEl~~il~ 201 (844)
+-+|+.+. ++.+.|+...|+.++...+-...|-+|+.+++ ..+.+.+| .|+.+-|++++.
T Consensus 71 d~lf~~~~-----~~~~~i~~~~f~~~l~~~Gl~~~DpRl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~ 135 (534)
T 3uo9_A 71 DLLFYTIA-----EGQEKIPVHKFITALKSTGLRTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQ 135 (534)
T ss_dssp HHHHHHHH-----TTCSSEEHHHHHHHHHHTTCCTTCGGGHHHHHHHHHHHHHCSSTTEECHHHHHHHHG
T ss_pred HHHHHHHh-----CCCcEeeHHHHHHHHHHcCCCCCCchHHHHHHHHHHHhhccCccccccHHHHHHHhh
Confidence 45677553 45788999999999987664444555555554 33334555 699999998884
No 387
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=30.84 E-value=67 Score=29.86 Aligned_cols=58 Identities=9% Similarity=0.205 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHccc--CCCCcCHHHHhhcc----CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHH
Q 042007 100 DAWRSIERRFQQFA--VSGRLPKDKFGICV----GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWED 166 (844)
Q Consensus 100 ~~~~~l~~~F~~ld--~dG~is~~eF~~~l----g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~ 166 (844)
...+.++..|.+|| .||.|+..|-.+.| ...+... .. +.|. .+|..|+-+|+-+.|..
T Consensus 12 ~~~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~-~~---~~fh-----~~D~~Isv~eLw~~W~~ 75 (150)
T 2k60_A 12 LSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTV-KH---STFH-----GEDKLISVEDLWKAWKS 75 (150)
T ss_dssp CHHHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHH-HH---HHHT-----SSSCCEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchh-hh---hccc-----CCCCeeeHHHHHHHhcc
Confidence 45666777777777 89999988866555 3333222 22 3343 13678999999998863
No 388
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=25.61 E-value=44 Score=35.76 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=21.6
Q ss_pred CeEEEEEcccc--hhchHHHHHHHHHH
Q 042007 665 DILLLIGLGIG--ATPFISIIKDLLNH 689 (844)
Q Consensus 665 ~~vvlVagGiG--ITp~lsil~~l~~~ 689 (844)
.++|+.|||+| |.|.+++++.|..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 47899999997 89999999998764
No 389
>1vf5_A Cytochrome B6; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.21.1.2 PDB: 2d2c_A* 2e74_A* 2e75_A* 2e76_A* 2zt9_A* 1q90_B*
Probab=25.50 E-value=4.5e+02 Score=25.82 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhh
Q 042007 371 LNFHKLIALGIAIGSIVHTLFHL 393 (844)
Q Consensus 371 ~~fHr~ig~~~~~~~~vH~~~~~ 393 (844)
...|.|-|-+++++..+|..--+
T Consensus 83 R~~H~~gAs~ffi~~ylHi~Rgl 105 (215)
T 1vf5_A 83 RSIHRWSASMMVLMMILHVFRVY 105 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999987655
No 390
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=25.38 E-value=4.7e+02 Score=25.33 Aligned_cols=64 Identities=8% Similarity=0.045 Sum_probs=37.3
Q ss_pred HHHHHHHHHHcccCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhc
Q 042007 101 AWRSIERRFQQFAVSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMT 168 (844)
Q Consensus 101 ~~~~l~~~F~~ld~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~ 168 (844)
.+++++..|..-+....|..+-+.+.+ |..++....--+-..|. ...-|.|+.+||+..|..+.
T Consensus 5 ~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~----a~~~g~ftr~ef~~G~~~l~ 71 (200)
T 3tdu_A 5 KLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFR----AATQCEFSKQEFMDGMTELG 71 (200)
T ss_dssp HHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTT----CSSTTCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcC----CCccCccCHHHHHHHHHHHc
Confidence 455555555421112578887665554 77755432222222122 34479999999999998764
No 391
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=23.65 E-value=1.1e+02 Score=34.17 Aligned_cols=65 Identities=6% Similarity=0.111 Sum_probs=44.4
Q ss_pred HHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCC-ceeHHHHHHHHHc
Q 042007 177 QIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKG-YIEMWQLEILLRG 246 (844)
Q Consensus 177 ~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG-~It~~EF~~ll~~ 246 (844)
..+|++| .++.|.|+...|.++|+..+. ...+....+..+.|-+..+.+.+| .|+++-|++++..
T Consensus 71 d~lf~~~-~~~~~~i~~~~f~~~l~~~Gl----~~~DpRl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~~ 136 (534)
T 3uo9_A 71 DLLFYTI-AEGQEKIPVHKFITALKSTGL----RTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQS 136 (534)
T ss_dssp HHHHHHH-HTTCSSEEHHHHHHHHHHTTC----CTTCGGGHHHHHHHHHHHHHCSSTTEECHHHHHHHHGG
T ss_pred HHHHHHH-hCCCcEeeHHHHHHHHHHcCC----CCCCchHHHHHHHHHHHhhccCccccccHHHHHHHhhc
Confidence 3458888 678899999999999976443 222334455555554444444455 6999999998863
No 392
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=23.53 E-value=27 Score=36.62 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=37.7
Q ss_pred CCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 149 VNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 149 ~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+|+||.|+.++.+.+...+...+.+..- -+..|.|.||.|+.+++.-+-+
T Consensus 252 vn~D~~i~i~D~~~i~~~~~~~~~~~~~---~~~~DlN~DG~in~~Di~~v~k 301 (321)
T 3kcp_A 252 IVKDNSINLLDVAEVIRCFNATKGSANY---VEELDINRNGAINMQDIMIVHK 301 (321)
T ss_dssp CSSSSBCCHHHHHHHHTTTTCBTTSTTC---CGGGCTTCSSBCSHHHHHHHHT
T ss_pred ccCCCcccHHHHHHHHHHhccccCCccc---cccccccccCcccHHHHHHHHH
Confidence 7899999999999988777642211100 1678999999999999886664
No 393
>1daq_A Endoglucanase SS, CELS; cellulose degradation, cellulosome, calcium-binding, hydrolase; NMR {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1dav_A
Probab=23.25 E-value=27 Score=28.10 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=33.1
Q ss_pred CCCCCCceeHHHHHHHHHHhccCChHHHHHHHHHHhccCCCCcccHHHHHHHHH
Q 042007 148 KVNTENGITKEEVRMFWEDMTKKDLDARLQIFFDMCDKNGDGILTEDEVREVIV 201 (844)
Q Consensus 148 ~~d~dG~I~f~EF~~~l~~~~~~~~~~~l~~~F~~fD~d~dG~It~eEl~~il~ 201 (844)
+.|+||.|+-.+|..+-..+...... .-...-|.|+||.|+..++..+-+
T Consensus 8 DvN~Dg~vn~~D~~~l~~yllg~~~~----~~~~~aDvn~DG~in~~D~~~l~~ 57 (71)
T 1daq_A 8 DVNDDGKVNSTDAVALKRYVLRSGIS----INTDNADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp CSSSSSCSSGGGHHHHHHHHHCSCSC----CCGGGTCSSSSSSCSSHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHcCCCcc----ccchhhcccCCCcccHHHHHHHHH
Confidence 36889998888886654433221111 014567999999999999875554
No 394
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=22.39 E-value=5.4e+02 Score=24.90 Aligned_cols=65 Identities=6% Similarity=0.028 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHcccCCCCcCHHHHhhcc---CCCCCHHHHHHHHHHHhcccCCCCCCceeHHHHHHHHHHhcc
Q 042007 100 DAWRSIERRFQQFAVSGRLPKDKFGICV---GMGESTEFSVGVFEALARRRKVNTENGITKEEVRMFWEDMTK 169 (844)
Q Consensus 100 ~~~~~l~~~F~~ld~dG~is~~eF~~~l---g~~~~~~~~~~lf~~l~~~~~~d~dG~I~f~EF~~~l~~~~~ 169 (844)
..+++++..|..- .+..|..+-..+.+ |...+....--+-..|. ...-|.|+.+||+.+|..+.-
T Consensus 7 ~~l~~lF~~Y~d~-~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~----a~~~g~ftr~ef~~G~~~l~~ 74 (199)
T 3kev_A 7 KAILELFQTYKEP-LGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLK----ASSTCEFSEKEFVEGLANLQV 74 (199)
T ss_dssp HHHHHHHHHHCCT-TSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTT----CCSTTCEEHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC-CcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcC----CCccCcccHHHHHHHHHHhCC
Confidence 4565666666532 23389887765554 77654432222222122 345799999999999987753
No 395
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=21.17 E-value=2.1e+02 Score=23.57 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHhccCCCCcccHHHHHHHHHhhhccccccccccchHHHHHHHHHHhCCCCCCceeHHHHHHHHHc
Q 042007 172 LDARLQIFFDMCDKNGDGILTEDEVREVIVLSASENKLSNLKENSSTYAALIMEKLDPDCKGYIEMWQLEILLRG 246 (844)
Q Consensus 172 ~~~~l~~~F~~fD~d~dG~It~eEl~~il~~~~~~~~l~~~~~~~~e~~~~if~~~D~d~dG~It~~EF~~ll~~ 246 (844)
+.+-+..+|..+=++.+-+|+.+-++-+.+.. +--+.|-+.....+...+++++|+.+++++++-+
T Consensus 10 ~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl---------~iFV~EAv~RA~~~a~~e~~~~le~~~LEki~pq 75 (81)
T 3b0b_C 10 RKETVERLLRLHFRDGRTRVNGDALLLMAELL---------KVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQ 75 (81)
T ss_dssp CHHHHHHHHHHHCCSTTCEECHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCcccccHHHHHHHHHHH---------HHHHHHHHHHHHHHHHhCCCCeecHHHHHHHHHH
Confidence 45667777777777778899988776554321 1123445555566666678899999999997743
Done!