Query 042009
Match_columns 262
No_of_seqs 130 out of 442
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 22:38:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042009.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042009hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 2.4E-71 8.1E-76 522.7 25.1 252 3-261 118-379 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 4.2E-71 1.4E-75 517.2 20.9 239 14-261 119-358 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 1.1E-68 3.9E-73 503.4 22.6 244 9-258 125-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 98.3 2.2E-05 7.6E-10 68.7 15.9 146 31-244 114-259 (279)
5 2p35_A Trans-aconitate 2-methy 98.0 0.00023 7.9E-09 60.9 16.6 146 31-244 92-238 (259)
6 2yqz_A Hypothetical protein TT 97.9 0.00021 7.2E-09 61.1 13.4 169 22-261 92-263 (263)
7 3bus_A REBM, methyltransferase 97.6 0.0031 1E-07 54.4 16.2 141 21-237 116-256 (273)
8 3dtn_A Putative methyltransfer 97.3 0.003 1E-07 53.2 12.4 118 21-185 97-217 (234)
9 3hnr_A Probable methyltransfer 97.3 0.0012 4.2E-08 54.9 9.9 111 22-186 95-205 (220)
10 3hem_A Cyclopropane-fatty-acyl 97.3 0.0039 1.3E-07 55.0 13.4 108 32-182 135-243 (302)
11 3ujc_A Phosphoethanolamine N-m 97.3 0.011 3.6E-07 50.3 15.5 99 22-182 108-206 (266)
12 3sm3_A SAM-dependent methyltra 97.2 0.0028 9.5E-08 52.9 11.3 121 21-185 88-210 (235)
13 3f4k_A Putative methyltransfer 97.2 0.0027 9.3E-08 54.1 11.2 154 22-260 102-257 (257)
14 2ld4_A Anamorsin; methyltransf 97.2 0.00062 2.1E-08 55.2 6.2 72 30-177 59-130 (176)
15 3h2b_A SAM-dependent methyltra 97.1 0.0012 4.2E-08 54.3 7.5 94 22-183 90-183 (203)
16 3mgg_A Methyltransferase; NYSG 96.9 0.023 7.7E-07 49.0 14.0 107 22-185 93-201 (276)
17 2o57_A Putative sarcosine dime 96.9 0.03 1E-06 48.8 14.7 98 21-182 137-234 (297)
18 1vl5_A Unknown conserved prote 96.7 0.016 5.4E-07 49.6 11.3 103 22-185 91-193 (260)
19 3dli_A Methyltransferase; PSI- 96.7 0.0094 3.2E-07 50.5 9.7 90 29-183 96-185 (240)
20 4htf_A S-adenosylmethionine-de 96.6 0.0066 2.3E-07 52.8 8.3 110 23-184 124-234 (285)
21 1kpg_A CFA synthase;, cyclopro 96.6 0.12 4E-06 44.7 16.3 101 30-182 126-228 (287)
22 2g72_A Phenylethanolamine N-me 96.5 0.0042 1.5E-07 54.4 6.6 89 30-184 170-258 (289)
23 2aot_A HMT, histamine N-methyl 96.5 0.0054 1.8E-07 53.9 7.1 88 30-179 131-218 (292)
24 3kkz_A Uncharacterized protein 96.5 0.031 1.1E-06 48.0 11.9 94 23-182 103-196 (267)
25 3l8d_A Methyltransferase; stru 96.3 0.033 1.1E-06 46.7 10.7 96 23-182 105-200 (242)
26 2p7i_A Hypothetical protein; p 96.3 0.024 8.2E-07 47.3 9.8 98 29-183 98-200 (250)
27 3cc8_A Putative methyltransfer 96.3 0.01 3.6E-07 49.0 7.4 100 28-185 87-188 (230)
28 3ou2_A SAM-dependent methyltra 96.2 0.011 3.6E-07 48.8 7.2 111 21-182 95-205 (218)
29 2fk8_A Methoxy mycolic acid sy 96.2 0.067 2.3E-06 47.2 12.6 101 31-182 153-254 (318)
30 3lcc_A Putative methyl chlorid 96.1 0.034 1.2E-06 46.7 9.9 89 21-183 120-208 (235)
31 1xxl_A YCGJ protein; structura 96.1 0.079 2.7E-06 44.8 12.2 101 23-184 76-176 (239)
32 1vlm_A SAM-dependent methyltra 96.0 0.056 1.9E-06 45.0 10.6 97 24-182 92-188 (219)
33 2a14_A Indolethylamine N-methy 95.9 0.012 4.1E-07 51.0 6.3 86 32-183 154-239 (263)
34 3bgv_A MRNA CAP guanine-N7 met 95.7 0.0091 3.1E-07 52.9 4.7 100 31-182 111-232 (313)
35 3e23_A Uncharacterized protein 95.7 0.03 1E-06 46.2 7.6 85 31-183 99-183 (211)
36 1xtp_A LMAJ004091AAA; SGPP, st 95.6 0.023 8E-07 48.0 6.8 94 21-182 145-238 (254)
37 3giw_A Protein of unknown func 95.6 0.029 1E-06 50.1 7.6 68 98-189 187-255 (277)
38 3dh0_A SAM dependent methyltra 95.6 0.08 2.7E-06 43.6 9.8 87 23-182 95-181 (219)
39 4hg2_A Methyltransferase type 95.5 0.019 6.3E-07 50.3 6.0 25 23-47 88-112 (257)
40 3g5l_A Putative S-adenosylmeth 95.5 0.03 1E-06 47.5 7.2 112 22-182 96-216 (253)
41 3e8s_A Putative SAM dependent 95.2 0.019 6.6E-07 47.3 4.8 65 98-181 139-208 (227)
42 3ocj_A Putative exported prote 95.2 0.24 8.1E-06 43.5 12.2 110 21-181 175-290 (305)
43 1ri5_A MRNA capping enzyme; me 95.2 0.13 4.5E-06 44.2 10.3 110 22-182 120-250 (298)
44 3bkx_A SAM-dependent methyltra 95.1 0.095 3.2E-06 44.9 9.1 102 30-182 118-219 (275)
45 3vc1_A Geranyl diphosphate 2-C 95.0 0.041 1.4E-06 48.7 6.6 96 23-182 174-269 (312)
46 4gek_A TRNA (CMO5U34)-methyltr 94.9 0.08 2.7E-06 46.2 8.2 101 30-176 135-239 (261)
47 1nkv_A Hypothetical protein YJ 94.9 0.34 1.2E-05 40.8 11.8 95 21-180 91-185 (256)
48 2qe6_A Uncharacterized protein 94.8 0.11 3.8E-06 45.6 8.8 98 29-189 152-250 (274)
49 3i53_A O-methyltransferase; CO 94.5 0.4 1.4E-05 42.5 11.9 99 19-181 222-320 (332)
50 2i62_A Nicotinamide N-methyltr 94.4 0.085 2.9E-06 44.6 7.0 96 23-184 142-241 (265)
51 3dlc_A Putative S-adenosyl-L-m 94.4 0.068 2.3E-06 43.6 6.1 102 23-180 100-201 (219)
52 2ex4_A Adrenal gland protein A 94.3 0.11 3.7E-06 43.8 7.3 92 22-182 134-225 (241)
53 1pjz_A Thiopurine S-methyltran 94.1 0.06 2.1E-06 44.7 5.2 28 155-184 151-178 (203)
54 3lst_A CALO1 methyltransferase 94.1 0.46 1.6E-05 42.6 11.6 101 19-181 235-335 (348)
55 2gs9_A Hypothetical protein TT 94.1 0.27 9.4E-06 40.1 9.2 87 24-172 85-171 (211)
56 3ege_A Putative methyltransfer 94.0 0.42 1.4E-05 40.8 10.6 102 22-187 82-183 (261)
57 3bkw_A MLL3908 protein, S-aden 94.0 0.12 4E-06 43.2 6.8 29 153-182 186-214 (243)
58 3g5t_A Trans-aconitate 3-methy 93.9 0.17 5.8E-06 44.2 8.0 83 33-172 112-195 (299)
59 3reo_A (ISO)eugenol O-methyltr 93.9 0.83 2.9E-05 41.4 12.9 107 19-182 249-355 (368)
60 3p9c_A Caffeic acid O-methyltr 93.8 0.81 2.8E-05 41.5 12.7 107 19-182 247-353 (364)
61 3gwz_A MMCR; methyltransferase 93.8 0.54 1.8E-05 42.6 11.4 101 19-181 255-355 (369)
62 3cgg_A SAM-dependent methyltra 93.7 0.26 8.9E-06 39.2 8.1 77 23-180 96-173 (195)
63 2gb4_A Thiopurine S-methyltran 93.7 0.3 1E-05 42.3 9.1 88 23-183 140-228 (252)
64 3i9f_A Putative type 11 methyl 93.7 0.3 1E-05 38.4 8.4 80 28-182 69-148 (170)
65 2zfu_A Nucleomethylin, cerebra 93.6 0.075 2.6E-06 43.8 4.8 20 160-180 158-177 (215)
66 3mcz_A O-methyltransferase; ad 93.6 0.52 1.8E-05 42.0 10.8 103 19-178 232-335 (352)
67 4e2x_A TCAB9; kijanose, tetron 93.5 0.093 3.2E-06 48.3 5.7 86 30-182 167-253 (416)
68 3pfg_A N-methyltransferase; N, 93.2 0.18 6.2E-06 42.9 6.8 23 156-179 212-234 (263)
69 1qzz_A RDMB, aclacinomycin-10- 93.0 1 3.6E-05 40.3 11.8 103 20-183 236-340 (374)
70 3dp7_A SAM-dependent methyltra 92.7 0.89 3E-05 41.1 11.1 108 18-180 231-340 (363)
71 3g2m_A PCZA361.24; SAM-depende 92.5 0.091 3.1E-06 45.9 4.0 31 152-183 245-275 (299)
72 4a6d_A Hydroxyindole O-methylt 92.5 1.1 3.7E-05 40.5 11.2 103 18-180 230-332 (353)
73 2ip2_A Probable phenazine-spec 92.1 1.8 6.3E-05 38.0 12.2 101 19-181 220-321 (334)
74 2xvm_A Tellurite resistance pr 92.1 0.63 2.1E-05 37.2 8.3 88 22-182 86-173 (199)
75 4fsd_A Arsenic methyltransfera 91.7 0.29 1E-05 44.7 6.6 48 29-116 161-208 (383)
76 2r3s_A Uncharacterized protein 91.5 1.5 5.3E-05 38.4 10.9 103 20-180 219-321 (335)
77 1x19_A CRTF-related protein; m 90.6 2.2 7.4E-05 38.2 11.1 105 19-182 243-348 (359)
78 3thr_A Glycine N-methyltransfe 90.2 0.29 9.9E-06 42.2 4.8 51 30-113 126-177 (293)
79 1tw3_A COMT, carminomycin 4-O- 90.1 2 6.9E-05 38.2 10.4 103 20-183 237-340 (360)
80 2p8j_A S-adenosylmethionine-de 89.2 0.41 1.4E-05 38.8 4.7 95 29-176 84-178 (209)
81 3m70_A Tellurite resistance pr 88.8 1.5 5.2E-05 37.5 8.3 86 22-180 173-258 (286)
82 1fp1_D Isoliquiritigenin 2'-O- 88.7 2.7 9.1E-05 37.9 10.2 103 18-181 254-359 (372)
83 3ggd_A SAM-dependent methyltra 88.5 1.8 6.2E-05 36.0 8.4 23 158-183 198-220 (245)
84 3ofk_A Nodulation protein S; N 88.3 0.8 2.7E-05 37.4 5.9 53 23-113 104-156 (216)
85 2kw5_A SLR1183 protein; struct 88.3 1.2 4E-05 36.0 6.8 63 92-185 112-174 (202)
86 2vdw_A Vaccinia virus capping 87.1 0.37 1.3E-05 42.8 3.3 114 30-182 125-246 (302)
87 3q87_B N6 adenine specific DNA 86.9 2.4 8.2E-05 33.7 7.8 28 23-51 68-95 (170)
88 1zg3_A Isoflavanone 4'-O-methy 86.3 3.6 0.00012 36.7 9.5 104 18-181 238-346 (358)
89 1y8c_A S-adenosylmethionine-de 84.1 1.5 5.1E-05 36.1 5.4 24 156-180 200-223 (246)
90 4df3_A Fibrillarin-like rRNA/T 83.4 1.7 5.9E-05 37.4 5.7 30 16-45 129-158 (233)
91 1yzh_A TRNA (guanine-N(7)-)-me 83.2 6.1 0.00021 32.2 8.9 21 27-47 104-124 (214)
92 3jwh_A HEN1; methyltransferase 81.7 1.7 6E-05 35.5 4.9 24 24-47 92-115 (217)
93 3gu3_A Methyltransferase; alph 81.1 6.5 0.00022 33.7 8.6 25 23-48 79-103 (284)
94 1ej0_A FTSJ; methyltransferase 80.8 1.2 4.1E-05 34.3 3.4 56 30-114 84-139 (180)
95 2pxx_A Uncharacterized protein 80.3 1.3 4.4E-05 35.7 3.5 66 24-114 97-162 (215)
96 3jwg_A HEN1, methyltransferase 79.5 2.3 7.7E-05 34.7 4.9 25 23-47 91-115 (219)
97 1fp2_A Isoflavone O-methyltran 78.3 13 0.00044 32.9 9.9 105 18-181 233-340 (352)
98 3grz_A L11 mtase, ribosomal pr 76.3 2 6.8E-05 34.8 3.6 16 98-113 146-161 (205)
99 3d2l_A SAM-dependent methyltra 76.1 3.9 0.00014 33.5 5.5 23 157-180 199-221 (243)
100 3g07_A 7SK snRNA methylphospha 76.0 2.3 7.7E-05 37.0 4.1 48 30-111 173-220 (292)
101 3bxo_A N,N-dimethyltransferase 75.9 3.8 0.00013 33.5 5.3 23 156-179 202-224 (239)
102 1dus_A MJ0882; hypothetical pr 74.2 4.5 0.00016 31.6 5.1 52 23-114 109-160 (194)
103 2zig_A TTHA0409, putative modi 70.9 8.2 0.00028 33.7 6.5 26 87-112 73-98 (297)
104 2plw_A Ribosomal RNA methyltra 68.7 2.6 8.8E-05 33.8 2.5 18 30-47 102-119 (201)
105 2nyu_A Putative ribosomal RNA 67.8 16 0.00056 28.7 7.2 23 91-113 125-147 (196)
106 3hp7_A Hemolysin, putative; st 67.6 2.8 9.6E-05 37.3 2.7 24 158-182 209-232 (291)
107 3lbf_A Protein-L-isoaspartate 66.7 3.7 0.00013 33.1 3.1 27 21-47 130-156 (210)
108 1ve3_A Hypothetical protein PH 64.4 9.3 0.00032 30.8 5.1 53 23-113 92-144 (227)
109 2avn_A Ubiquinone/menaquinone 63.3 1.9 6.5E-05 36.5 0.6 73 96-182 137-213 (260)
110 3q7e_A Protein arginine N-meth 62.3 5.5 0.00019 35.7 3.6 51 22-109 121-171 (349)
111 2fca_A TRNA (guanine-N(7)-)-me 61.2 16 0.00055 29.9 6.1 20 28-47 102-121 (213)
112 3iv6_A Putative Zn-dependent a 61.2 8.9 0.0003 33.3 4.6 16 32-47 108-123 (261)
113 3m33_A Uncharacterized protein 61.0 12 0.0004 30.8 5.2 11 98-108 129-139 (226)
114 3dmg_A Probable ribosomal RNA 58.0 13 0.00044 34.0 5.4 57 21-112 285-341 (381)
115 3dxy_A TRNA (guanine-N(7)-)-me 57.6 9 0.00031 31.8 3.9 20 27-46 98-117 (218)
116 3opn_A Putative hemolysin; str 55.0 8.1 0.00028 32.6 3.2 67 92-182 118-184 (232)
117 1boo_A Protein (N-4 cytosine-s 54.8 6.2 0.00021 35.2 2.5 25 89-113 62-86 (323)
118 1vbf_A 231AA long hypothetical 52.8 8.1 0.00028 31.6 2.8 25 23-47 123-147 (231)
119 3hm2_A Precorrin-6Y C5,15-meth 52.5 5.9 0.0002 30.7 1.8 18 29-46 87-106 (178)
120 1af7_A Chemotaxis receptor met 52.4 11 0.00038 32.9 3.8 19 30-48 208-227 (274)
121 3r0q_C Probable protein argini 51.7 8.8 0.0003 34.8 3.1 51 23-111 119-169 (376)
122 3mq2_A 16S rRNA methyltransfer 50.7 15 0.00051 29.7 4.1 22 161-183 164-185 (218)
123 3evz_A Methyltransferase; NYSG 50.6 28 0.00096 28.2 5.8 63 30-113 119-181 (230)
124 2yxe_A Protein-L-isoaspartate 49.3 10 0.00034 30.6 2.8 25 23-47 135-159 (215)
125 3ckk_A TRNA (guanine-N(7)-)-me 46.2 18 0.00062 30.3 4.0 22 26-47 115-136 (235)
126 4dcm_A Ribosomal RNA large sub 44.4 19 0.00065 32.7 4.1 28 21-49 280-307 (375)
127 2pjd_A Ribosomal RNA small sub 44.4 21 0.00071 31.6 4.3 55 21-112 250-304 (343)
128 3e05_A Precorrin-6Y C5,15-meth 42.7 41 0.0014 26.7 5.5 21 92-112 123-143 (204)
129 3qua_A Putative uncharacterize 42.3 12 0.00041 31.4 2.3 42 127-171 158-199 (199)
130 1zx0_A Guanidinoacetate N-meth 41.5 20 0.0007 29.4 3.6 23 22-44 114-139 (236)
131 1g6q_1 HnRNP arginine N-methyl 40.7 20 0.00069 31.6 3.6 18 91-108 125-142 (328)
132 2a33_A Hypothetical protein; s 40.4 21 0.00073 30.1 3.5 42 126-170 149-190 (215)
133 1wek_A Hypothetical protein TT 40.1 33 0.0011 29.0 4.7 42 126-170 171-212 (217)
134 2fyt_A Protein arginine N-meth 39.3 26 0.0009 31.1 4.2 20 89-108 149-168 (340)
135 3p2e_A 16S rRNA methylase; met 39.1 17 0.00058 30.3 2.7 21 162-183 166-186 (225)
136 2p41_A Type II methyltransfera 37.6 40 0.0014 29.6 5.1 21 93-113 173-193 (305)
137 1q1h_A TFE, transcription fact 37.3 13 0.00045 27.1 1.6 42 129-170 48-93 (110)
138 1r18_A Protein-L-isoaspartate( 36.6 22 0.00075 29.0 3.0 16 98-113 181-196 (227)
139 2v1n_A KIN17, protein KIN homo 36.0 28 0.00096 26.6 3.2 75 74-180 11-85 (111)
140 1t35_A Hypothetical protein YV 36.0 24 0.00082 29.1 3.1 42 126-170 137-178 (191)
141 2ozv_A Hypothetical protein AT 35.6 24 0.00083 29.8 3.2 24 89-112 148-171 (260)
142 3lpm_A Putative methyltransfer 34.9 69 0.0024 26.6 6.0 25 87-111 152-176 (259)
143 1dl5_A Protein-L-isoaspartate 34.4 21 0.00071 31.2 2.6 27 21-47 131-157 (317)
144 1jg1_A PIMT;, protein-L-isoasp 34.2 21 0.00073 29.3 2.5 17 98-114 176-192 (235)
145 2wa2_A Non-structural protein 32.8 82 0.0028 27.1 6.2 21 93-113 173-195 (276)
146 2jqt_A H-NS/STPA-binding prote 32.3 19 0.00063 25.4 1.5 21 88-108 34-57 (71)
147 1nvp_D Transcription initiatio 32.2 25 0.00085 26.7 2.4 54 128-183 11-65 (108)
148 1ydh_A AT5G11950; structural g 32.2 33 0.0011 28.9 3.4 42 126-170 145-186 (216)
149 3orh_A Guanidinoacetate N-meth 31.9 20 0.00069 29.8 2.0 23 88-110 147-169 (236)
150 3ol0_A De novo designed monome 31.7 27 0.00092 22.7 2.1 25 14-38 6-30 (48)
151 2qjy_B Cytochrome C1; cytochro 31.7 41 0.0014 29.6 4.0 63 21-98 151-219 (269)
152 2oxt_A Nucleoside-2'-O-methylt 31.7 91 0.0031 26.6 6.3 21 93-113 165-187 (265)
153 1pp9_D Cytochrome C-1, cytochr 31.6 40 0.0014 29.2 3.8 51 21-98 144-194 (241)
154 1zrt_D Cytochrome C1; cytochro 28.6 66 0.0023 28.1 4.8 63 21-98 149-217 (258)
155 3sbx_A Putative uncharacterize 27.9 29 0.00098 28.8 2.2 40 127-169 149-188 (189)
156 2nxc_A L11 mtase, ribosomal pr 27.5 1.1E+02 0.0038 25.5 6.0 45 129-181 199-243 (254)
157 2pbf_A Protein-L-isoaspartate 27.5 21 0.00072 29.0 1.3 16 98-113 180-195 (227)
158 3gjy_A Spermidine synthase; AP 27.0 1.2E+02 0.0042 26.9 6.4 20 94-113 183-202 (317)
159 1nh2_D Transcription initiatio 26.3 36 0.0012 26.4 2.4 55 127-183 14-69 (121)
160 2lmc_A Bacterial RNA polymeras 26.0 42 0.0015 24.0 2.5 32 149-180 44-78 (84)
161 3id6_C Fibrillarin-like rRNA/T 25.6 33 0.0011 29.1 2.2 15 100-114 170-184 (232)
162 3uwp_A Histone-lysine N-methyl 25.1 35 0.0012 32.1 2.5 19 92-110 269-287 (438)
163 3p9n_A Possible methyltransfer 24.3 74 0.0025 24.8 4.1 26 91-116 131-158 (189)
164 1wzn_A SAM-dependent methyltra 24.0 48 0.0017 27.1 3.0 25 89-113 123-147 (252)
165 3mti_A RRNA methylase; SAM-dep 24.0 51 0.0018 25.5 3.0 21 93-113 117-137 (185)
166 1i9g_A Hypothetical protein RV 23.7 1.8E+02 0.0062 23.9 6.7 20 21-40 158-177 (280)
167 1y60_A Formaldehyde-activating 23.6 45 0.0015 27.3 2.5 24 129-152 88-111 (169)
168 3tfw_A Putative O-methyltransf 23.4 69 0.0024 26.6 3.9 20 93-112 152-171 (248)
169 3ez0_A Uncharacterized protein 23.0 47 0.0016 28.4 2.7 28 212-239 96-123 (225)
170 1uir_A Polyamine aminopropyltr 21.5 79 0.0027 27.6 4.0 16 98-113 182-197 (314)
171 3cx5_D Cytochrome C1, heme pro 21.4 79 0.0027 27.4 3.8 16 83-98 183-198 (248)
172 1jyo_E Protein tyrosine phosph 21.4 21 0.00073 26.9 0.2 45 37-101 9-57 (105)
173 1wxx_A TT1595, hypothetical pr 21.3 1.9E+02 0.0064 25.7 6.6 29 85-113 299-327 (382)
174 4hhu_A OR280; engineered prote 20.8 3E+02 0.01 21.3 7.3 57 64-141 41-107 (170)
175 4ham_A LMO2241 protein; struct 20.6 1.2E+02 0.004 22.9 4.4 50 85-147 18-71 (134)
176 2igt_A SAM dependent methyltra 20.0 1.1E+02 0.0039 26.9 4.8 27 87-113 248-274 (332)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=2.4e-71 Score=522.73 Aligned_cols=252 Identities=38% Similarity=0.652 Sum_probs=223.9
Q ss_pred chhhhhhcCCCCceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHH
Q 042009 3 KKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAY 82 (262)
Q Consensus 3 ~~~~~~~~~~~~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay 82 (262)
+++.+++|+..++||++|||||||+||||++|+|++||++||||||++|+.+.++. |++||||+||++.++|+.|.+||
T Consensus 118 ~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~-s~~~nkg~i~i~~~sp~~v~~ay 196 (384)
T 2efj_A 118 RNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTEL-GISVNKGCIYSSKASRPPIQKAY 196 (384)
T ss_dssp HHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC-------CCCCTTCSSSCTTSCHHHHHHH
T ss_pred hhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccc-cccccCCceEecCCCCHHHHHHH
Confidence 44556667767899999999999999999999999999999999999999999876 69999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCceEEEEecccCCC--CCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCC
Q 042009 83 SLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSI--DPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPC 160 (262)
Q Consensus 83 ~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~--~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps 160 (262)
++||++||.+||++|++||+|||+||++++|+++. ++.++ ++|.++|++||.||+|+++++|+||+|+|+||
T Consensus 197 ~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps 270 (384)
T 2efj_A 197 LDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSM------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPS 270 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHH------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccH------HHHHHHHHHHHHhCCcchhhhcccCCcccCCC
Confidence 99999999999999999999999999999999987 66543 38999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEEEEeEeecCCCC---ccccc--cccc---ccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHH
Q 042009 161 PEELKMAIQKEGSFIIDRLGHFEIDWDGG---VEELT--NTTL---LPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLF 232 (262)
Q Consensus 161 ~~Ev~~~ie~~gsF~I~~le~~~~~w~~~---~~~~~--~d~~---~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF 232 (262)
++|++++|+++|+|+|+++|+++.+|+++ +++++ .+.. +....|+.+|+++||++||+|.+|||++|||+||
T Consensus 271 ~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF 350 (384)
T 2efj_A 271 TEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLS 350 (384)
T ss_dssp HHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHH
T ss_pred HHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHH
Confidence 99999999999999999999999999987 44210 1100 1246899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEEEEecC
Q 042009 233 ARYAEMVDDYLSKNRAKYINLVISIIKKD 261 (262)
Q Consensus 233 ~r~~~~v~~~~~~~~~~~~~~~v~L~r~~ 261 (262)
+||+++++++++.+++++++++++|+||.
T Consensus 351 ~ry~~~~~~~~~~~~~~~~~~~~~L~k~~ 379 (384)
T 2efj_A 351 HRIAKNAAKVLRSGKGFYDSVIISLAKKP 379 (384)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHhhCCCceEEEEEEEEEcc
Confidence 99999999999999999999999999985
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=4.2e-71 Score=517.18 Aligned_cols=239 Identities=49% Similarity=0.869 Sum_probs=225.7
Q ss_pred CceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHH
Q 042009 14 GRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIF 93 (262)
Q Consensus 14 ~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 93 (262)
++||++|||||||+||||++|+||+||++||||||++|+.+.+ |||+||++.++|++|.+||++||++||.+|
T Consensus 119 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~-------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~F 191 (359)
T 1m6e_X 119 GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES-------NKGNIYMANTCPQSVLNAYYKQFQEDHALF 191 (359)
T ss_dssp TCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCC-------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHH
T ss_pred CCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhc-------cCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred HHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCc
Q 042009 94 LKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGS 173 (262)
Q Consensus 94 L~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gs 173 (262)
|++|++||+|||+||++++|+++.++++++++.+|++|.++|++||.||+|++|++|+||+|+|+||++|++++|+++|+
T Consensus 192 L~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~ 271 (359)
T 1m6e_X 192 LRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGS 271 (359)
T ss_dssp HHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTT
T ss_pred HHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCC
Confidence 99999999999999999999999988888777899999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeEeecCCCCcccccccc-cccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCceEE
Q 042009 174 FIIDRLGHFEIDWDGGVEELTNTT-LLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYIN 252 (262)
Q Consensus 174 F~I~~le~~~~~w~~~~~~~~~d~-~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~~~~~~~~~ 252 (262)
|+|+++|+++.+|++++++ +|. .++...|+.+++++||++||+|.+|||++|||+||+||+++++++++.+++++++
T Consensus 272 F~i~~~e~~~~~~~~~~~~--~d~~~~~~~~g~~~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~~~~~~~~ 349 (359)
T 1m6e_X 272 FLIDHIEASEIYWSSCTKD--GDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFIN 349 (359)
T ss_dssp BCCEEEEEEEEETTCCSSC--TTCCSSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred ceEEEEEEEeeccCcccch--hhhhhhhhHhHhHhhhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEE
Confidence 9999999999999887653 121 1235789999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecC
Q 042009 253 LVISIIKKD 261 (262)
Q Consensus 253 ~~v~L~r~~ 261 (262)
++++|+||.
T Consensus 350 ~~~~L~k~~ 358 (359)
T 1m6e_X 350 VIVSLIRKS 358 (359)
T ss_dssp EEEEEEBCC
T ss_pred EEEEEEeCC
Confidence 999999985
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-68 Score=503.39 Aligned_cols=244 Identities=34% Similarity=0.560 Sum_probs=223.5
Q ss_pred hcCCCCceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHH
Q 042009 9 KGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQN 88 (262)
Q Consensus 9 ~~~~~~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 88 (262)
++...++||++|||||||+||||++|+|++||++||||||++|+.+.++. |++||||+||+++++|+ |.+||++||++
T Consensus 125 ~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~-~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~ 202 (374)
T 3b5i_A 125 AADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRR-SAAYNRGRVFIHGAGEK-TTTAYKRQFQA 202 (374)
T ss_dssp --CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTT-STTCCTTTSSSSSCCHH-HHHHHHHHHHH
T ss_pred cccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccc-cccccCCceEeCCCCHH-HHHHHHHHHHH
Confidence 34445689999999999999999999999999999999999999998876 69999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhccCceEEEEecccCCCCCCCc-hhhHHH-HHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHH
Q 042009 89 NFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTE-ESCYQW-ELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKM 166 (262)
Q Consensus 89 D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~-~~~~~~-~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~ 166 (262)
||..||++|++||+|||+||++++|+++.+++++ +.+.+| ++|.++|++|+.||+|+++++|+||+|+|+||++|+++
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~ 282 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKE 282 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHH
Confidence 9999999999999999999999999999887763 456788 99999999999999999999999999999999999999
Q ss_pred HHhcCCceEEEEEEeEeecCCCCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHh--
Q 042009 167 AIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLS-- 244 (262)
Q Consensus 167 ~ie~~gsF~I~~le~~~~~w~~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~-- 244 (262)
+|+++|+|+|+++|+++.+|+++.+.. .+ . ...|+.+++++||++||+|.+|||++|||+||+||+++++++++
T Consensus 283 ~l~~~~~F~I~~le~~~~~~~~~~~~~-~~-~--~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~ 358 (374)
T 3b5i_A 283 VVDANGSFAIDKLVVYKGGSPLVVNEP-DD-A--SEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDV 358 (374)
T ss_dssp HHHHHCSEEEEEEEEEECCCCCCCSST-TC-H--HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhcCCcEEEEEEEEeecCCcccccc-ch-h--HHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHh
Confidence 999889999999999999998865532 12 1 56899999999999999999999999999999999999999988
Q ss_pred hcCCc--eEEEEEEEE
Q 042009 245 KNRAK--YINLVISII 258 (262)
Q Consensus 245 ~~~~~--~~~~~v~L~ 258 (262)
.++++ +++++++|+
T Consensus 359 ~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 359 LVNLQFFHIVASLSFT 374 (374)
T ss_dssp HTTCCCEEEEEEEEEC
T ss_pred hhccccceEEEEEEeC
Confidence 66777 799999885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.31 E-value=2.2e-05 Score=68.72 Aligned_cols=146 Identities=23% Similarity=0.293 Sum_probs=92.5
Q ss_pred CCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 042009 31 PDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 31 P~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~ 110 (262)
+++++|+++|+.++||+.. | + .+|+.=++-|+|||++++.
T Consensus 114 ~~~~fD~v~~~~~l~~~~d-~------------------------~---------------~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 114 VDKPLDAVFSNAMLHWVKE-P------------------------E---------------AAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CSSCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcCEEEEcchhhhCcC-H------------------------H---------------HHHHHHHHhcCCCcEEEEE
Confidence 3689999999999999753 1 1 1233335679999999998
Q ss_pred ecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEeecCCCCc
Q 042009 111 LMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGV 190 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~~w~~~~ 190 (262)
..+..+ ...+.+.+...+.. .|.- .....-|+++++.+++...+++.| |++...+.+..++.. .
T Consensus 154 ~~~~~~-------~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~-~ 217 (279)
T 3ccf_A 154 FGGKGN-------IKYILEALYNALET---LGIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL-A 217 (279)
T ss_dssp EECTTT-------THHHHHHHHHHHHH---HTCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC-S
T ss_pred ecCCcc-------hHHHHHHHHHHHHh---cCCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc-c
Confidence 876543 12233444444333 2321 233556788999999999999999 999888877544211 1
Q ss_pred ccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 042009 191 EELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLS 244 (262)
Q Consensus 191 ~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~ 244 (262)
. ....+..++++...+.+. .++++..+++.+++.+.+.+...
T Consensus 218 ~-----------~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 259 (279)
T 3ccf_A 218 E-----------GEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDKLY 259 (279)
T ss_dssp S-----------GGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHHHE
T ss_pred C-----------CHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhhcc
Confidence 0 111334455554444443 46677778888888877776543
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.05 E-value=0.00023 Score=60.86 Aligned_cols=146 Identities=11% Similarity=0.133 Sum_probs=85.0
Q ss_pred CCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 042009 31 PDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 31 P~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~ 110 (262)
|++++|+++|+.++||+.. | ..+|+.=.+-|+|||++++.
T Consensus 92 ~~~~fD~v~~~~~l~~~~~-~---------------------------------------~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 92 PAQKADLLYANAVFQWVPD-H---------------------------------------LAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp CSSCEEEEEEESCGGGSTT-H---------------------------------------HHHHHHHGGGEEEEEEEEEE
T ss_pred ccCCcCEEEEeCchhhCCC-H---------------------------------------HHHHHHHHHhcCCCeEEEEE
Confidence 7899999999999999732 1 12334446789999999999
Q ss_pred ecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEeecCCCCc
Q 042009 111 LMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGV 190 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~~w~~~~ 190 (262)
..+... . . ....+.++...+......-+....+...++.+++.+.+++.| |+|+..+..... ++
T Consensus 132 ~~~~~~-----~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~--~~- 195 (259)
T 2p35_A 132 MPDNLQ-----E---P----THIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNH--PM- 195 (259)
T ss_dssp EECCTT-----S---H----HHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEE--EE-
T ss_pred eCCCCC-----c---H----HHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeee--cc-
Confidence 875322 0 1 112233333222111111111123567789999999999998 886655432111 11
Q ss_pred ccccccccccchhHHHHHhhhhhhh-hhHHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 042009 191 EELTNTTLLPLSRGQRVAKTVRAVV-ESMFELHFGKAMMDLLFARYAEMVDDYLS 244 (262)
Q Consensus 191 ~~~~~d~~~~~~~a~~~a~~~RA~~-ep~l~~hfge~I~delF~r~~~~v~~~~~ 244 (262)
.....+..++++.. .+.+ ..++++-.+++.+++.+.+.+++.
T Consensus 196 -----------~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 196 -----------KDADSIVEWVKGTGLRPYL-AAAGEENREAFLADYTRRIAAAYP 238 (259)
T ss_dssp -----------SCHHHHHHHHTTTTTTHHH-HTTCGGGHHHHHHHHHHHHHHHSC
T ss_pred -----------CCchHHhhhhhcCcchHHH-HhCCHHHHHHHHHHHHHHHHHhCC
Confidence 12224455566543 3333 467777788888888888876643
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.89 E-value=0.00021 Score=61.14 Aligned_cols=169 Identities=11% Similarity=0.067 Sum_probs=97.1
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+++..--+|++++|+++++.++||+.. | + .+|+.=.+-|
T Consensus 92 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L 131 (263)
T 2yqz_A 92 QADARAIPLPDESVHGVIVVHLWHLVPD-W------------------------P---------------KVLAEAIRVL 131 (263)
T ss_dssp ESCTTSCCSCTTCEEEEEEESCGGGCTT-H------------------------H---------------HHHHHHHHHE
T ss_pred EcccccCCCCCCCeeEEEECCchhhcCC-H------------------------H---------------HHHHHHHHHC
Confidence 3455544578999999999999999742 1 1 1233335679
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++.+...+. .. .....+.+...+.. .|. + ..-+.+..+.+++.+.+++.| |++...+.
T Consensus 132 ~pgG~l~~~~~~~~~----~~-~~~~~~~~~~~~~~---~~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 195 (263)
T 2yqz_A 132 KPGGALLEGWDQAEA----SP-EWTLQERWRAFAAE---EGF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREV 195 (263)
T ss_dssp EEEEEEEEEEEEECC----CH-HHHHHHHHHHHHHH---HTC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CCCcEEEEEecCCCc----cH-HHHHHHHHHHHHHH---hCC-C------cccccccCCHHHHHHHHHHcC-CCcceEEE
Confidence 999999999433211 11 01122223332222 131 1 112345678999999999999 88776655
Q ss_pred EeecCCCCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC---ceEEEEEEEE
Q 042009 182 FEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRA---KYINLVISII 258 (262)
Q Consensus 182 ~~~~w~~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~~~~~---~~~~~~v~L~ 258 (262)
.. |.. ....+.+...+++.+.+.+ .+++++..+++.+++.+.+.++...... -...++++.-
T Consensus 196 ~~--~~~------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 260 (263)
T 2yqz_A 196 AR--WRE------------ERTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRVS 260 (263)
T ss_dssp EE--EEE------------EECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEEE
T ss_pred ee--eec------------CCCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEee
Confidence 43 221 0112233444554444433 4567778888888888888776543222 2245556666
Q ss_pred ecC
Q 042009 259 KKD 261 (262)
Q Consensus 259 r~~ 261 (262)
||+
T Consensus 261 rkp 263 (263)
T 2yqz_A 261 RLG 263 (263)
T ss_dssp ECC
T ss_pred ecC
Confidence 664
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.59 E-value=0.0031 Score=54.36 Aligned_cols=141 Identities=13% Similarity=0.108 Sum_probs=83.6
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+.+++..--+|++++|+++|+.++||+.. | ..+|+.=.+-
T Consensus 116 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~---------------------------------------~~~l~~~~~~ 155 (273)
T 3bus_A 116 SYADAMDLPFEDASFDAVWALESLHHMPD-R---------------------------------------GRALREMARV 155 (273)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCTTTSSC-H---------------------------------------HHHHHHHHTT
T ss_pred EECccccCCCCCCCccEEEEechhhhCCC-H---------------------------------------HHHHHHHHHH
Confidence 44566665588999999999999999632 1 1234444678
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++..+...+.. ... ....+..+.. .+ -..+.++.+++.+.+++.| |++...+
T Consensus 156 L~pgG~l~i~~~~~~~~~--~~~-------~~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~aG-f~~~~~~ 214 (273)
T 3bus_A 156 LRPGGTVAIADFVLLAPV--EGA-------KKEAVDAFRA----------GG-GVLSLGGIDEYESDVRQAE-LVVTSTV 214 (273)
T ss_dssp EEEEEEEEEEEEEESSCC--CHH-------HHHHHHHHHH----------HH-TCCCCCCHHHHHHHHHHTT-CEEEEEE
T ss_pred cCCCeEEEEEEeeccCCC--Chh-------HHHHHHHHHh----------hc-CccCCCCHHHHHHHHHHcC-CeEEEEE
Confidence 999999999987664421 110 1111111110 11 1235789999999999999 9988777
Q ss_pred eEeecCCCCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHH
Q 042009 181 HFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAE 237 (262)
Q Consensus 181 ~~~~~w~~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~ 237 (262)
.+...+. ..-..+...+++..+. +..++|++..+.+.+.+..
T Consensus 215 ~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 215 DISAQAR--------------PSLVKTAEAFENARSQ-VEPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp ECHHHHT--------------THHHHHHHHHHHTHHH-HHHHHCHHHHHHHHHHHHH
T ss_pred ECcHhHH--------------HHHHHHHHHHHHhHHH-HHhhcCHHHHHHHHHHHHH
Confidence 5532210 1111222223333222 4566787777776666655
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.33 E-value=0.003 Score=53.18 Aligned_cols=118 Identities=12% Similarity=0.012 Sum_probs=79.1
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+.+.+..-.++ ++.|+++++.++||++. |. ...+|+.=.+=
T Consensus 97 ~~~d~~~~~~~-~~fD~v~~~~~l~~~~~-~~-------------------------------------~~~~l~~~~~~ 137 (234)
T 3dtn_A 97 IEADYSKYDFE-EKYDMVVSALSIHHLED-ED-------------------------------------KKELYKRSYSI 137 (234)
T ss_dssp EESCTTTCCCC-SCEEEEEEESCGGGSCH-HH-------------------------------------HHHHHHHHHHH
T ss_pred EeCchhccCCC-CCceEEEEeCccccCCH-HH-------------------------------------HHHHHHHHHHh
Confidence 44666665566 99999999999999732 10 01223333567
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccc---cCcccCCHHHHHHHHhcCCceEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFN---APYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn---~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
|+|||++++.-...++. ..........|.....++-.+.+++..+. --.+.++.+|+.+.+++.| |++.
T Consensus 138 LkpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v 209 (234)
T 3dtn_A 138 LKESGIFINADLVHGET-------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDV 209 (234)
T ss_dssp EEEEEEEEEEEECBCSS-------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEE
T ss_pred cCCCcEEEEEEecCCCC-------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCce
Confidence 99999999987765442 22345556677777777667776554431 2345678999999999999 9887
Q ss_pred EEEeEeec
Q 042009 178 RLGHFEID 185 (262)
Q Consensus 178 ~le~~~~~ 185 (262)
+......+
T Consensus 210 ~~~~~~~~ 217 (234)
T 3dtn_A 210 SCIYKYYQ 217 (234)
T ss_dssp EEEEEETT
T ss_pred eeeeeecc
Confidence 77655433
No 9
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.33 E-value=0.0012 Score=54.91 Aligned_cols=111 Identities=13% Similarity=0.159 Sum_probs=69.7
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..-.+| +++|+++++.++||+.. |. ...+|+.=.+-|
T Consensus 95 ~~d~~~~~~~-~~fD~v~~~~~l~~~~~-~~-------------------------------------~~~~l~~~~~~L 135 (220)
T 3hnr_A 95 EGDFLSFEVP-TSIDTIVSTYAFHHLTD-DE-------------------------------------KNVAIAKYSQLL 135 (220)
T ss_dssp SCCSSSCCCC-SCCSEEEEESCGGGSCH-HH-------------------------------------HHHHHHHHHHHS
T ss_pred eCChhhcCCC-CCeEEEEECcchhcCCh-HH-------------------------------------HHHHHHHHHHhc
Confidence 3455554566 99999999999999633 10 012344446779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++......+. ......+..+...|.... ..-..+.++++.+|++..+++.| |+|...+.
T Consensus 136 kpgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~ 200 (220)
T 3hnr_A 136 NKGGKIVFADTIFADQ-----------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRL 200 (220)
T ss_dssp CTTCEEEEEEECBSSH-----------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEEC
T ss_pred CCCCEEEEEeccccCh-----------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeec
Confidence 9999999987554331 122233333344443211 11223457789999999999999 89888776
Q ss_pred EeecC
Q 042009 182 FEIDW 186 (262)
Q Consensus 182 ~~~~w 186 (262)
....|
T Consensus 201 ~~~~w 205 (220)
T 3hnr_A 201 NHFVW 205 (220)
T ss_dssp SSSEE
T ss_pred cceEE
Confidence 54444
No 10
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.30 E-value=0.0039 Score=54.96 Aligned_cols=108 Identities=12% Similarity=0.140 Sum_probs=64.8
Q ss_pred CCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 042009 32 DKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSL 111 (262)
Q Consensus 32 ~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~ 111 (262)
++++|+++|..++|++.. |....+ .+++..+|+.=.+=|+|||++++..
T Consensus 135 ~~~fD~v~~~~~~~~~~d-~~~~~~------------------------------~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFAD-GAGDAG------------------------------FERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CCCCSEEEEESCGGGTTC-CSSCCC------------------------------TTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred CCCccEEEEcchHHhcCc-cccccc------------------------------hhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 789999999999999766 432111 1234455666678899999999998
Q ss_pred cccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCc-ccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 112 MGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPY-YAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 112 ~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~-y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
...++.... ......+..-...+.+.. .....|. +.|+.+|+...+++.| |++..++.+
T Consensus 184 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 243 (302)
T 3hem_A 184 ITIPDKEEA-QELGLTSPMSLLRFIKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVERYHRI 243 (302)
T ss_dssp EECCCHHHH-HHHTCCCCHHHHHHHHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEEC
T ss_pred EeccCccch-hhccccccccccchHHHH----------HHhcCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 876542100 000000000000111111 1123343 6789999999999988 988877654
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.27 E-value=0.011 Score=50.30 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=63.8
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..--+|++++|+++++.++|+++. .|...+|+.=.+=|
T Consensus 108 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~~~l~~~~~~L 149 (266)
T 3ujc_A 108 ANDILTKEFPENNFDLIYSRDAILALSL--------------------------------------ENKNKLFQKCYKWL 149 (266)
T ss_dssp ECCTTTCCCCTTCEEEEEEESCGGGSCH--------------------------------------HHHHHHHHHHHHHE
T ss_pred ECccccCCCCCCcEEEEeHHHHHHhcCh--------------------------------------HHHHHHHHHHHHHc
Confidence 3455555678999999999999999721 11223344446779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++.....+...+.. ..+...+.. . ....++.+++...+++.| |++.+.+.
T Consensus 150 ~pgG~l~~~~~~~~~~~~~~-------~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~~~~~~ 205 (266)
T 3ujc_A 150 KPTGTLLITDYCATEKENWD-------DEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKNVVSKD 205 (266)
T ss_dssp EEEEEEEEEEEEESCGGGCC-------HHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCCCEEEEEEeccCCcccch-------HHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeEEEEEe
Confidence 99999999987665421111 111111111 1 234678999999999998 88776664
Q ss_pred E
Q 042009 182 F 182 (262)
Q Consensus 182 ~ 182 (262)
+
T Consensus 206 ~ 206 (266)
T 3ujc_A 206 L 206 (266)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.25 E-value=0.0028 Score=52.87 Aligned_cols=121 Identities=14% Similarity=0.040 Sum_probs=73.3
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+.+..--+|++++|+++++..+|++.. |. +...+|+.=.+-
T Consensus 88 ~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-~~------------------------------------~~~~~l~~~~~~ 130 (235)
T 3sm3_A 88 KVENASSLSFHDSSFDFAVMQAFLTSVPD-PK------------------------------------ERSRIIKEVFRV 130 (235)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCGGGCCC-HH------------------------------------HHHHHHHHHHHH
T ss_pred EEecccccCCCCCceeEEEEcchhhcCCC-HH------------------------------------HHHHHHHHHHHH
Confidence 33445454578999999999999998643 11 111344444677
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhccc--ccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSF--NAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsf--n~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
|+|||+++++..+..... ..+.......+.....+|.......... ....+.++.+|+++.+++.| |++..
T Consensus 131 L~pgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~ 203 (235)
T 3sm3_A 131 LKPGAYLYLVEFGQNWHL------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDY 203 (235)
T ss_dssp EEEEEEEEEEEEBCCTTS------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEE
T ss_pred cCCCeEEEEEECCcchhH------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEE
Confidence 999999999988764321 1112222222322222232111111111 23356789999999999998 99999
Q ss_pred EEeEeec
Q 042009 179 LGHFEID 185 (262)
Q Consensus 179 le~~~~~ 185 (262)
++....+
T Consensus 204 ~~~~~~~ 210 (235)
T 3sm3_A 204 FRVKELE 210 (235)
T ss_dssp EEEEEEE
T ss_pred EEeccee
Confidence 8876544
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.23 E-value=0.0027 Score=54.10 Aligned_cols=154 Identities=14% Similarity=0.105 Sum_probs=90.2
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+++..--+|++++|++++..++||+ . |. .+|+.=.+-|
T Consensus 102 ~~d~~~~~~~~~~fD~v~~~~~l~~~-~-~~---------------------------------------~~l~~~~~~L 140 (257)
T 3f4k_A 102 TGSMDNLPFQNEELDLIWSEGAIYNI-G-FE---------------------------------------RGMNEWSKYL 140 (257)
T ss_dssp ECCTTSCSSCTTCEEEEEEESCSCCC-C-HH---------------------------------------HHHHHHHTTE
T ss_pred ECChhhCCCCCCCEEEEEecChHhhc-C-HH---------------------------------------HHHHHHHHHc
Confidence 34554444788999999999999996 1 11 1222225679
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++..+....... .. .+...|... .|. .++.+++...+++.| |++.....
T Consensus 141 ~pgG~l~~~~~~~~~~~~-~~-------~~~~~~~~~---------------~~~-~~~~~~~~~~l~~aG-f~~v~~~~ 195 (257)
T 3f4k_A 141 KKGGFIAVSEASWFTSER-PA-------EIEDFWMDA---------------YPE-ISVIPTCIDKMERAG-YTPTAHFI 195 (257)
T ss_dssp EEEEEEEEEEEEESSSCC-CH-------HHHHHHHHH---------------CTT-CCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCcEEEEEEeeccCCCC-hH-------HHHHHHHHh---------------CCC-CCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999999865433221 11 122223221 011 568999999999999 98877654
Q ss_pred Eeec-CC-CCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCceEEEEEEEEe
Q 042009 182 FEID-WD-GGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIK 259 (262)
Q Consensus 182 ~~~~-w~-~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~~~~~~~~~~~v~L~r 259 (262)
+... |. .+. ...+...+.....+-++...+++-++..+.+..+ ..+...+.-.+++++|
T Consensus 196 ~~~~~w~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~~k 256 (257)
T 3f4k_A 196 LPENCWTEHYF------------------APQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIGQK 256 (257)
T ss_dssp CCGGGTCCCCC------------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEE
T ss_pred CChhhHHHHHH------------------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHhCCccceEEEEEec
Confidence 4322 41 111 1122233444455556666667766666655543 3445556666777776
Q ss_pred c
Q 042009 260 K 260 (262)
Q Consensus 260 ~ 260 (262)
+
T Consensus 257 ~ 257 (257)
T 3f4k_A 257 R 257 (257)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.17 E-value=0.00062 Score=55.18 Aligned_cols=72 Identities=14% Similarity=0.115 Sum_probs=49.2
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|++++|+++|++++||+..-+ .. +|+.=++=|+|||++++
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~~------------------------~~---------------~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLHS------------------------AE---------------ILAEIARILRPGGCLFL 99 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCCC------------------------HH---------------HHHHHHHHEEEEEEEEE
T ss_pred CCCCCEeEEEECChhhhcccCH------------------------HH---------------HHHHHHHHCCCCEEEEE
Confidence 3899999999999999982101 11 12222677999999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
.-...... + -+.|.++.+|+...+++.| | |+
T Consensus 100 ~~~~~~~~------------------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 100 KEPVETAV------------------------D-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEESSS------------------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred Eccccccc------------------------c-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 53321100 0 0677788999999999888 6 66
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.11 E-value=0.0012 Score=54.34 Aligned_cols=94 Identities=19% Similarity=0.120 Sum_probs=66.3
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+.+--+|++++|+++++.++|+++. . |...+|+.=++-|
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~------------------------------------~~~~~l~~~~~~L 131 (203)
T 3h2b_A 90 HGTITDLSDSPKRWAGLLAWYSLIHMGP--G------------------------------------ELPDALVALRMAV 131 (203)
T ss_dssp CCCGGGGGGSCCCEEEEEEESSSTTCCT--T------------------------------------THHHHHHHHHHTE
T ss_pred eCcccccccCCCCeEEEEehhhHhcCCH--H------------------------------------HHHHHHHHHHHHc
Confidence 3455554578899999999999999742 0 1112333336779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++........ ..++....+.+..+.+|++..+++.| |++..++.
T Consensus 132 ~pgG~l~i~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 181 (203)
T 3h2b_A 132 EDGGGLLMSFFSGPSL-----------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTSSHW 181 (203)
T ss_dssp EEEEEEEEEEECCSSC-----------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCcEEEEEEccCCch-----------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEe
Confidence 9999999998765431 11122233667789999999999998 99998887
Q ss_pred Ee
Q 042009 182 FE 183 (262)
Q Consensus 182 ~~ 183 (262)
+.
T Consensus 182 ~~ 183 (203)
T 3h2b_A 182 DP 183 (203)
T ss_dssp CT
T ss_pred cC
Confidence 64
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.88 E-value=0.023 Score=48.97 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=63.8
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+....-.+|++++|+++++.++||+.. |. .+|+.=.+=|
T Consensus 93 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~~---------------------------------------~~l~~~~~~L 132 (276)
T 3mgg_A 93 QANIFSLPFEDSSFDHIFVCFVLEHLQS-PE---------------------------------------EALKSLKKVL 132 (276)
T ss_dssp ECCGGGCCSCTTCEEEEEEESCGGGCSC-HH---------------------------------------HHHHHHHHHE
T ss_pred EcccccCCCCCCCeeEEEEechhhhcCC-HH---------------------------------------HHHHHHHHHc
Confidence 3555666688999999999999999754 11 1122224569
Q ss_pred ccCceEEEEecccCCCC--CCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEE
Q 042009 102 VAGGRMVLSLMGRRSID--PTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRL 179 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~--~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~l 179 (262)
+|||.+++......+.. +... ...... ..+..+.... .....+.+++...+++.| |++.++
T Consensus 133 ~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~------------~~~~~~~~~l~~~l~~aG-f~~v~~ 195 (276)
T 3mgg_A 133 KPGGTITVIEGDHGSCYFHPEGK---KAIEAW-NCLIRVQAYM------------KGNSLVGRQIYPLLQESG-FEKIRV 195 (276)
T ss_dssp EEEEEEEEEEECGGGCEEESCCH---HHHHHH-HHHHHHHHHT------------TCCTTGGGGHHHHHHHTT-CEEEEE
T ss_pred CCCcEEEEEEcCCCCceECCCcH---HHHHHH-HHHHHHHHhc------------CCCcchHHHHHHHHHHCC-CCeEEE
Confidence 99999999876443221 1111 111111 2222221110 011235688999999999 998888
Q ss_pred EeEeec
Q 042009 180 GHFEID 185 (262)
Q Consensus 180 e~~~~~ 185 (262)
+...++
T Consensus 196 ~~~~~~ 201 (276)
T 3mgg_A 196 EPRMVY 201 (276)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 877554
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.86 E-value=0.03 Score=48.79 Aligned_cols=98 Identities=13% Similarity=0.056 Sum_probs=63.4
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+++..--+|++++|++++..++|++.. |. .+|+.=.+=
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~~---------------------------------------~~l~~~~~~ 176 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDAFLHSPD-KL---------------------------------------KVFQECARV 176 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCGGGCSC-HH---------------------------------------HHHHHHHHH
T ss_pred EEcCcccCCCCCCCEeEEEecchhhhcCC-HH---------------------------------------HHHHHHHHH
Confidence 34566665678999999999999999644 11 122333567
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++..+...+..+ ... +...+.. +..| ..++.+++...+++.| |++.+.+
T Consensus 177 LkpgG~l~~~~~~~~~~~~-~~~-------~~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~ 232 (297)
T 2o57_A 177 LKPRGVMAITDPMKEDGID-KSS-------IQPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTF 232 (297)
T ss_dssp EEEEEEEEEEEEEECTTCC-GGG-------GHHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred cCCCeEEEEEEeccCCCCc-hHH-------HHHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEE
Confidence 9999999999876654321 110 1111111 1122 3569999999999999 9887766
Q ss_pred eE
Q 042009 181 HF 182 (262)
Q Consensus 181 ~~ 182 (262)
.+
T Consensus 233 ~~ 234 (297)
T 2o57_A 233 SR 234 (297)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.68 E-value=0.016 Score=49.60 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=63.8
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..--||++++|+++|+.++||+.. | + .+|+.=.+=|
T Consensus 91 ~~d~~~l~~~~~~fD~V~~~~~l~~~~d-~------------------------~---------------~~l~~~~r~L 130 (260)
T 1vl5_A 91 QGDAEQMPFTDERFHIVTCRIAAHHFPN-P------------------------A---------------SFVSEAYRVL 130 (260)
T ss_dssp ECCC-CCCSCTTCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHHE
T ss_pred EecHHhCCCCCCCEEEEEEhhhhHhcCC-H------------------------H---------------HHHHHHHHHc
Confidence 4555554588999999999999999743 1 1 1122225679
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||+++++....++. . ....+...+..+. + .......+.+++...+++.| |++..++.
T Consensus 131 kpgG~l~~~~~~~~~~----~----~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 189 (260)
T 1vl5_A 131 KKGGQLLLVDNSAPEN----D----AFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FELEELHC 189 (260)
T ss_dssp EEEEEEEEEEEEBCSS----H----HHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEEEEEEE
T ss_pred CCCCEEEEEEcCCCCC----H----HHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 9999999986654331 1 1111111121111 0 01234568999999999988 99888877
Q ss_pred Eeec
Q 042009 182 FEID 185 (262)
Q Consensus 182 ~~~~ 185 (262)
...+
T Consensus 190 ~~~~ 193 (260)
T 1vl5_A 190 FHKT 193 (260)
T ss_dssp EEEE
T ss_pred eecc
Confidence 6543
No 19
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.68 E-value=0.0094 Score=50.50 Aligned_cols=90 Identities=23% Similarity=0.251 Sum_probs=60.2
Q ss_pred cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 042009 29 LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 29 lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 108 (262)
-+|++++|+++|+.++||+.. | |+..+|+.=.+-|+|||+++
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~-~-------------------------------------~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDP-E-------------------------------------RLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCG-G-------------------------------------GHHHHHHHHHHHBCTTCCEE
T ss_pred hcCCCCeeEEEECCchhhCCc-H-------------------------------------HHHHHHHHHHHHcCCCcEEE
Confidence 478999999999999999742 1 11223444467799999999
Q ss_pred EEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 109 LSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 109 l~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
+...+... ... +... .+. .-..+..+.+++...+++.| |++...+.+.
T Consensus 138 ~~~~~~~~----------~~~-~~~~--------~~~-------~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 138 IESPNPTS----------LYS-LINF--------YID-------PTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp EEEECTTS----------HHH-HHHH--------TTS-------TTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred EEeCCcch----------hHH-HHHH--------hcC-------ccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 98876322 111 1111 011 11245678899999999998 9988877764
No 20
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.58 E-value=0.0066 Score=52.82 Aligned_cols=110 Identities=14% Similarity=0.269 Sum_probs=67.3
Q ss_pred Ccccccc-CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 23 GSFYDRL-FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 23 gSFY~rl-fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
+.+..-. ++++++|+++++.++||+.. | . .+|+.=++=|
T Consensus 124 ~d~~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L 163 (285)
T 4htf_A 124 CAAQDVASHLETPVDLILFHAVLEWVAD-P------------------------R---------------SVLQTLWSVL 163 (285)
T ss_dssp SCGGGTGGGCSSCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHTE
T ss_pred cCHHHhhhhcCCCceEEEECchhhcccC-H------------------------H---------------HHHHHHHHHc
Confidence 4444444 78999999999999999732 1 1 1233336779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++........ .....+...|. ....+..... ....-|.+..+++|+...+++.| |+|...+.
T Consensus 164 kpgG~l~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~~ 231 (285)
T 4htf_A 164 RPGGVLSLMFYNAHGL--------LMHNMVAGNFD-YVQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGKTG 231 (285)
T ss_dssp EEEEEEEEEEEBHHHH--------HHHHHHTTCHH-HHHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCCeEEEEEEeCCchH--------HHHHHHhcCHH-HHhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeeeee
Confidence 9999999998764321 01111111121 1222322211 11234567789999999999998 99988887
Q ss_pred Eee
Q 042009 182 FEI 184 (262)
Q Consensus 182 ~~~ 184 (262)
+..
T Consensus 232 ~~~ 234 (285)
T 4htf_A 232 VRV 234 (285)
T ss_dssp ESS
T ss_pred EEE
Confidence 753
No 21
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.56 E-value=0.12 Score=44.69 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=57.9
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+| ++.|+++|..++|++.. . |...+|+.=.+-|+|||++++
T Consensus 126 ~~-~~fD~v~~~~~l~~~~~-----~---------------------------------~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 126 FD-EPVDRIVSIGAFEHFGH-----E---------------------------------RYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp CC-CCCSEEEEESCGGGTCT-----T---------------------------------THHHHHHHHHHHSCTTCEEEE
T ss_pred CC-CCeeEEEEeCchhhcCh-----H---------------------------------HHHHHHHHHHHhcCCCCEEEE
Confidence 46 89999999999998742 0 011223333567999999999
Q ss_pred EecccCCCCCC-CchhhHHHHHHHHHHHHHHHhccCChhhhcccccC-cccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 110 SLMGRRSIDPT-TEESCYQWELLAQALMSLVTERLIEEEKLDSFNAP-YYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 110 ~~~g~~~~~~~-~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P-~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
......+.... ......... ...+.+...+. ..| ...|+.+|+.+.+++.| |++.+.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 228 (287)
T 1kpg_A 167 HTITGLHPKEIHERGLPMSFT--FARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVTRVQSL 228 (287)
T ss_dssp EEEEECCHHHHTTTTCSCHHH--HHHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred EEecCCCcccccccccccccc--ccchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 98876442100 000000000 01111111111 112 24579999999999988 988777644
No 22
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.50 E-value=0.0042 Score=54.35 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=60.8
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|++++|+++|+.+|||++.- + .|+..+|+.=++=|+|||+|++
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~---~---------------------------------~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD---L---------------------------------ASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS---H---------------------------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCC---H---------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 677889999999999997541 1 1223334444778999999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEee
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEI 184 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~ 184 (262)
...-... .. . .| .-..|.+..+.+|+.+.+++.| |++..++.+..
T Consensus 214 ~~~~~~~----~~--~---------------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~ 258 (289)
T 2g72_A 214 IGALEES----WY--L---------------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIM 258 (289)
T ss_dssp EEEESCC----EE--E---------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred EEecCcc----eE--E---------------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeec
Confidence 7422110 00 0 01 1123567789999999999998 99988887754
No 23
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.48 E-value=0.0054 Score=53.93 Aligned_cols=88 Identities=14% Similarity=0.248 Sum_probs=55.1
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
||+++.|+++++.+|||+...+.. |+.=.+=|+|||++++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~----------------------------------------l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPAT----------------------------------------LKFFHSLLGTNAKMLI 170 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHH----------------------------------------HHHHHHTEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCHHHH----------------------------------------HHHHHHHcCCCcEEEE
Confidence 678999999999999997541111 1111567999999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEE
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRL 179 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~l 179 (262)
.....+. . |. ..|..... . +... -...+++.+|+...+++.| |++...
T Consensus 171 ~~~~~~~---------~-~~---~~~~~~~~-~-~~~~------~~~~~~~~~~~~~~l~~aG-f~~~~~ 218 (292)
T 2aot_A 171 IVVSGSS---------G-WD---KLWKKYGS-R-FPQD------DLCQYITSDDLTQMLDNLG-LKYECY 218 (292)
T ss_dssp EEECTTS---------H-HH---HHHHHHGG-G-SCCC------TTCCCCCHHHHHHHHHHHT-CCEEEE
T ss_pred EEecCCc---------c-HH---HHHHHHHH-h-ccCC------CcccCCCHHHHHHHHHHCC-CceEEE
Confidence 9754321 1 11 11222111 1 1100 1245688999999999999 877653
No 24
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.47 E-value=0.031 Score=47.98 Aligned_cols=94 Identities=16% Similarity=0.120 Sum_probs=61.3
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+++-+--+|++++|+++|+.++|++ . |. .+|+.=.+-|+
T Consensus 103 ~d~~~~~~~~~~fD~i~~~~~~~~~-~-~~---------------------------------------~~l~~~~~~Lk 141 (267)
T 3kkz_A 103 GSMDDLPFRNEELDLIWSEGAIYNI-G-FE---------------------------------------RGLNEWRKYLK 141 (267)
T ss_dssp CCTTSCCCCTTCEEEEEESSCGGGT-C-HH---------------------------------------HHHHHHGGGEE
T ss_pred cChhhCCCCCCCEEEEEEcCCceec-C-HH---------------------------------------HHHHHHHHHcC
Confidence 4554444789999999999999996 2 11 12333367799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
|||++++..+....... .. .+...|.+ . .| ..++.+++.+.+++.| |++...+.+
T Consensus 142 pgG~l~~~~~~~~~~~~-~~-------~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~ 196 (267)
T 3kkz_A 142 KGGYLAVSECSWFTDER-PA-------EINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATFIL 196 (267)
T ss_dssp EEEEEEEEEEEESSSCC-CH-------HHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEEEC
T ss_pred CCCEEEEEEeeecCCCC-hH-------HHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 99999999876433221 11 12222321 1 12 4578999999999999 998877654
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.30 E-value=0.033 Score=46.70 Aligned_cols=96 Identities=15% Similarity=0.252 Sum_probs=63.2
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+..--+|++++|+++++.++|++.. | . .+|+.=.+-|+
T Consensus 105 ~d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L~ 144 (242)
T 3l8d_A 105 GDLSSLPFENEQFEAIMAINSLEWTEE-P------------------------L---------------RALNEIKRVLK 144 (242)
T ss_dssp CBTTBCSSCTTCEEEEEEESCTTSSSC-H------------------------H---------------HHHHHHHHHEE
T ss_pred cchhcCCCCCCCccEEEEcChHhhccC-H------------------------H---------------HHHHHHHHHhC
Confidence 455554578999999999999998632 1 1 12222356799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
|||++++...+....... . .+ .............++++++..+++.| |++.+.+.+
T Consensus 145 pgG~l~i~~~~~~~~~~~----~-~~------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 145 SDGYACIAILGPTAKPRE----N-SY------------------PRLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEEEEEECTTCGGGG----G-GG------------------GGGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCeEEEEEEcCCcchhhh----h-hh------------------hhhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 999999998765432100 0 00 01112233556689999999999999 998877755
No 26
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.29 E-value=0.024 Score=47.32 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=60.1
Q ss_pred cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH-HhhccCceE
Q 042009 29 LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA-AEMVAGGRM 107 (262)
Q Consensus 29 lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra-~EL~~GG~m 107 (262)
++|++++|+++++.+||++.. | . .+|+.=+ +=|+|||++
T Consensus 98 ~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~~LkpgG~l 137 (250)
T 2p7i_A 98 AQLPRRYDNIVLTHVLEHIDD-P------------------------V---------------ALLKRINDDWLAEGGRL 137 (250)
T ss_dssp CCCSSCEEEEEEESCGGGCSS-H------------------------H---------------HHHHHHHHTTEEEEEEE
T ss_pred cCcCCcccEEEEhhHHHhhcC-H------------------------H---------------HHHHHHHHHhcCCCCEE
Confidence 478999999999999999743 1 1 1222224 679999999
Q ss_pred EEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhh----hcccccCcccCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 108 VLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEK----LDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 108 vl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~----~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
+++.+.... . ..... . ..|...... .+...--....+.++++..+++.| |++.+.+.+.
T Consensus 138 ~i~~~~~~~-------~---~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 200 (250)
T 2p7i_A 138 FLVCPNANA-------V---SRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGIF 200 (250)
T ss_dssp EEEEECTTC-------H---HHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred EEEcCChHH-------H---HHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeeeE
Confidence 998765432 1 11111 1 123332210 011111224569999999999998 9998887653
No 27
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.29 E-value=0.01 Score=49.01 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=61.4
Q ss_pred ccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceE
Q 042009 28 RLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRM 107 (262)
Q Consensus 28 rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~m 107 (262)
.-+|++++|+++++.++|++.. |. .+|+.=.+-|+|||++
T Consensus 87 ~~~~~~~fD~v~~~~~l~~~~~-~~---------------------------------------~~l~~~~~~L~~gG~l 126 (230)
T 3cc8_A 87 MPYEEEQFDCVIFGDVLEHLFD-PW---------------------------------------AVIEKVKPYIKQNGVI 126 (230)
T ss_dssp CCSCTTCEEEEEEESCGGGSSC-HH---------------------------------------HHHHHTGGGEEEEEEE
T ss_pred CCCCCCccCEEEECChhhhcCC-HH---------------------------------------HHHHHHHHHcCCCCEE
Confidence 3467889999999999988643 11 1233336779999999
Q ss_pred EEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCCh--hhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEeec
Q 042009 108 VLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEE--EKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEID 185 (262)
Q Consensus 108 vl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~--e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~~ 185 (262)
++....... +..+.. +........ ...+ .......+.+|+.+.+++.| |++.+.+.+..+
T Consensus 127 ~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 188 (230)
T 3cc8_A 127 LASIPNVSH-----------ISVLAP----LLAGNWTYTEYGLLD--KTHIRFFTFNEMLRMFLKAG-YSISKVDRVYVD 188 (230)
T ss_dssp EEEEECTTS-----------HHHHHH----HHTTCCCCBSSSTTB--TTCCCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EEEeCCcch-----------HHHHHH----HhcCCceeccCCCCC--cceEEEecHHHHHHHHHHcC-CeEEEEEecccC
Confidence 998765422 111111 111111100 0011 12335679999999999999 999888877543
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.25 E-value=0.011 Score=48.78 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=63.9
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+.+..- +|++++|+++++.++|++.. | ++..+|+.=.+-
T Consensus 95 ~~~d~~~~-~~~~~~D~v~~~~~l~~~~~-~-------------------------------------~~~~~l~~~~~~ 135 (218)
T 3ou2_A 95 RQQDLFDW-TPDRQWDAVFFAHWLAHVPD-D-------------------------------------RFEAFWESVRSA 135 (218)
T ss_dssp EECCTTSC-CCSSCEEEEEEESCGGGSCH-H-------------------------------------HHHHHHHHHHHH
T ss_pred EecccccC-CCCCceeEEEEechhhcCCH-H-------------------------------------HHHHHHHHHHHH
Confidence 33555443 89999999999999998643 1 122234444677
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++...+++... +...+........ ...+... ..+.....+++.+|+.+.+++.| |+|+..+
T Consensus 136 L~pgG~l~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~ 203 (218)
T 3ou2_A 136 VAPGGVVEFVDVTDHERR--------LEQQDDSEPEVAV-RRTLQDG--RSFRIVKVFRSPAELTERLTALG-WSCSVDE 203 (218)
T ss_dssp EEEEEEEEEEEECCCC--------------------CEE-EEECTTS--CEEEEECCCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred cCCCeEEEEEeCCCCccc--------cchhhhcccccce-eeecCCc--chhhHhhcCCCHHHHHHHHHHCC-CEEEeee
Confidence 999999999988773321 0011100000000 0111100 11112234679999999999999 9987776
Q ss_pred eE
Q 042009 181 HF 182 (262)
Q Consensus 181 ~~ 182 (262)
+.
T Consensus 204 ~~ 205 (218)
T 3ou2_A 204 VH 205 (218)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 29
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.18 E-value=0.067 Score=47.18 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=57.3
Q ss_pred CCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 042009 31 PDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 31 P~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~ 110 (262)
| +++|+++|..++|++.. . |...+|+.=.+-|+|||++++.
T Consensus 153 ~-~~fD~v~~~~~l~~~~~-----~---------------------------------~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 153 A-EPVDRIVSIEAFEHFGH-----E---------------------------------NYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp C-CCCSEEEEESCGGGTCG-----G---------------------------------GHHHHHHHHHHHSCTTCEEEEE
T ss_pred C-CCcCEEEEeChHHhcCH-----H---------------------------------HHHHHHHHHHHhcCCCcEEEEE
Confidence 5 88999999999998642 0 1112233335679999999999
Q ss_pred ecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccC-cccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 111 LMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAP-YYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P-~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
.+...+.... .....-...-...+.+...+ ...| .+.|+.+|+...+++.| |++.+.+.+
T Consensus 194 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 254 (318)
T 2fk8_A 194 SSVSYHPYEM-AARGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEPLSL 254 (318)
T ss_dssp EEECCCHHHH-HTTCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCCEEC
T ss_pred EeccCCchhh-hhccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEEEec
Confidence 8876542100 00000000001111121111 1123 35679999999999988 877655543
No 30
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.11 E-value=0.034 Score=46.71 Aligned_cols=89 Identities=10% Similarity=0.096 Sum_probs=61.4
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+.+.. +.|+.++|+++++.++||+.. .. ...+|+.=++-
T Consensus 120 ~~~d~~~-~~~~~~fD~v~~~~~l~~~~~--~~------------------------------------~~~~l~~~~~~ 160 (235)
T 3lcc_A 120 VKEDVFT-WRPTELFDLIFDYVFFCAIEP--EM------------------------------------RPAWAKSMYEL 160 (235)
T ss_dssp ECCCTTT-CCCSSCEEEEEEESSTTTSCG--GG------------------------------------HHHHHHHHHHH
T ss_pred EECchhc-CCCCCCeeEEEEChhhhcCCH--HH------------------------------------HHHHHHHHHHH
Confidence 3455544 457889999999999999741 10 11223333567
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++........ ..-|.|..+.+|+...+++.| |++..++
T Consensus 161 LkpgG~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 205 (235)
T 3lcc_A 161 LKPDGELITLMYPITDH----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVE 205 (235)
T ss_dssp EEEEEEEEEEECCCSCC----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEE
T ss_pred CCCCcEEEEEEeccccc----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEE
Confidence 99999999876644321 112445689999999999998 9998888
Q ss_pred eEe
Q 042009 181 HFE 183 (262)
Q Consensus 181 ~~~ 183 (262)
...
T Consensus 206 ~~~ 208 (235)
T 3lcc_A 206 ENP 208 (235)
T ss_dssp ECT
T ss_pred ecC
Confidence 764
No 31
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.10 E-value=0.079 Score=44.76 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=62.7
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+..--+|++++|+++++.++||+.. | . .+|+.=.+=|+
T Consensus 76 ~d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~Lk 115 (239)
T 1xxl_A 76 GTAESLPFPDDSFDIITCRYAAHHFSD-V------------------------R---------------KAVREVARVLK 115 (239)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHHEE
T ss_pred cccccCCCCCCcEEEEEECCchhhccC-H------------------------H---------------HHHHHHHHHcC
Confidence 445444578899999999999999643 1 1 12222256799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
|||++++.-...++. . ..+.+.+.+..+. +. ......+.+|+...+++.| |++..++..
T Consensus 116 pgG~l~~~~~~~~~~----~----~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~ll~~aG-f~~~~~~~~ 174 (239)
T 1xxl_A 116 QDGRFLLVDHYAPED----P----VLDEFVNHLNRLR----------DP--SHVRESSLSEWQAMFSANQ-LAYQDIQKW 174 (239)
T ss_dssp EEEEEEEEEECBCSS----H----HHHHHHHHHHHHH----------CT--TCCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCcEEEEEEcCCCCC----h----hHHHHHHHHHHhc----------cc--cccCCCCHHHHHHHHHHCC-CcEEEEEee
Confidence 999999986654331 1 1122222221111 11 1133458999999999999 998888776
Q ss_pred ee
Q 042009 183 EI 184 (262)
Q Consensus 183 ~~ 184 (262)
..
T Consensus 175 ~~ 176 (239)
T 1xxl_A 175 NL 176 (239)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 32
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.00 E-value=0.056 Score=45.01 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=60.9
Q ss_pred ccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042009 24 SFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVA 103 (262)
Q Consensus 24 SFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 103 (262)
.+..--+|++++|+++++.+||++.. | . .+|+.=.+=|+|
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L~p 131 (219)
T 1vlm_A 92 TAENLPLKDESFDFALMVTTICFVDD-P------------------------E---------------RALKEAYRILKK 131 (219)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSC-H------------------------H---------------HHHHHHHHHEEE
T ss_pred ccccCCCCCCCeeEEEEcchHhhccC-H------------------------H---------------HHHHHHHHHcCC
Confidence 34333477889999999999999632 1 1 122222456899
Q ss_pred CceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 104 GGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 104 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
||++++......+ .+. ..+..+ ..| ..+.-.....+.+|+.+.+++.| |++.+....
T Consensus 132 gG~l~i~~~~~~~----------~~~---~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 132 GGYLIVGIVDRES----------FLG---REYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EEEEEEEEECSSS----------HHH---HHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred CcEEEEEEeCCcc----------HHH---HHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 9999998875432 011 111111 111 12333456689999999999998 888776654
No 33
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=95.92 E-value=0.012 Score=51.02 Aligned_cols=86 Identities=17% Similarity=0.089 Sum_probs=58.2
Q ss_pred CCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 042009 32 DKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSL 111 (262)
Q Consensus 32 ~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~ 111 (262)
..++|+++|+++|||++.-++ |+...|+.=++=|+|||+|++..
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~~------------------------------------~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSLD------------------------------------AYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSHH------------------------------------HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCEeeehHHHHHhcCCHH------------------------------------HHHHHHHHHHHHcCCCcEEEEEE
Confidence 679999999999999754111 22233333367899999999986
Q ss_pred cccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 112 MGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 112 ~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
....+ . .. .| .-..+.+..+.+|+...+++.| |+|.+++...
T Consensus 198 ~~~~~-----~-~~---------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 198 TLRLP-----S-YM---------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp ESSCC-----E-EE---------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred eecCc-----c-ce---------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 43211 0 00 11 0123556679999999999999 9998888763
No 34
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.70 E-value=0.0091 Score=52.91 Aligned_cols=100 Identities=12% Similarity=0.117 Sum_probs=60.2
Q ss_pred CCCccceEEcccccccc-cCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 31 PDKSLHFVHSSSSLHWL-SQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 31 P~~Svh~~~Ss~alHWL-S~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
|++++|+++|+.+|||+ ... .|...+|+.=++=|+|||++++
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~-------------------------------------~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESY-------------------------------------EQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSH-------------------------------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCH-------------------------------------HHHHHHHHHHHHHhCCCcEEEE
Confidence 35699999999999997 220 1223445555678999999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHH--hc-------cCChhhh------------cccccCcccCCHHHHHHHH
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVT--ER-------LIEEEKL------------DSFNAPYYAPCPEELKMAI 168 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~--eG-------li~~e~~------------dsfn~P~y~ps~~Ev~~~i 168 (262)
+.++.+ . +..+|...-. -| ..+.+++ ....+|.|..+.+++.+.+
T Consensus 154 ~~~~~~----------~----l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~ 219 (313)
T 3bgv_A 154 TTPNSF----------E----LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMA 219 (313)
T ss_dssp EEECHH----------H----HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHG
T ss_pred ecCChH----------H----HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHH
Confidence 987632 1 1122221100 01 1111111 2345677888899999999
Q ss_pred hcCCceEEEEEEeE
Q 042009 169 QKEGSFIIDRLGHF 182 (262)
Q Consensus 169 e~~gsF~I~~le~~ 182 (262)
++.| |++...+.+
T Consensus 220 ~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 220 KKYN-MKLVYKKTF 232 (313)
T ss_dssp GGGT-EEEEEEEEH
T ss_pred HHcC-cEEEEecCH
Confidence 9888 887766544
No 35
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.68 E-value=0.03 Score=46.15 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 042009 31 PDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 31 P~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~ 110 (262)
|++++|+++++.+||++.. .|+..+|+.=.+-|+|||++++.
T Consensus 99 ~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPR--------------------------------------DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp CCSCEEEEEECSCGGGSCH--------------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcEEEEEecCchhhcCH--------------------------------------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 8899999999999998641 12233444446779999999998
Q ss_pred ecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 111 LMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 111 ~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
+....... .+.+.-.....+.++++..+++.|.|++...+...
T Consensus 141 ~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 141 YKSGEGEG------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp EECCSSCE------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred EcCCCccc------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 76443211 01122234567999999999998878887777654
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.63 E-value=0.023 Score=47.97 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=61.8
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+.+..--+|++++|+++++.+||+++. .|+..+|+.=.+=
T Consensus 145 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~~~l~~~~~~ 186 (254)
T 1xtp_A 145 ILASMETATLPPNTYDLIVIQWTAIYLTD--------------------------------------ADFVKFFKHCQQA 186 (254)
T ss_dssp EESCGGGCCCCSSCEEEEEEESCGGGSCH--------------------------------------HHHHHHHHHHHHH
T ss_pred EEccHHHCCCCCCCeEEEEEcchhhhCCH--------------------------------------HHHHHHHHHHHHh
Confidence 33455554578899999999999998632 1223345555677
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++.......... . .....+.+.++.++++..+++.| |++.+.+
T Consensus 187 LkpgG~l~i~~~~~~~~~~-----------------------~------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 236 (254)
T 1xtp_A 187 LTPNGYIFFKENCSTGDRF-----------------------L------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEA 236 (254)
T ss_dssp EEEEEEEEEEEEBC--CCE-----------------------E------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEE
T ss_pred cCCCeEEEEEecCCCcccc-----------------------e------ecccCCcccCCHHHHHHHHHHCC-CEEEEee
Confidence 9999999998753222100 0 00112345679999999999998 8887776
Q ss_pred eE
Q 042009 181 HF 182 (262)
Q Consensus 181 ~~ 182 (262)
..
T Consensus 237 ~~ 238 (254)
T 1xtp_A 237 FQ 238 (254)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 37
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=95.61 E-value=0.029 Score=50.15 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=44.9
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
.+-|+|||+|+++....+.. . ...+.+.+.++. -..|+..+|.+|+.+.++ | |++.
T Consensus 187 ~~~L~PGG~Lvls~~~~d~~----p---~~~~~~~~~~~~--------------~g~p~~~rs~~ei~~~f~--G-lelv 242 (277)
T 3giw_A 187 LEPLPSGSYLAMSIGTAEFA----P---QEVGRVAREYAA--------------RNMPMRLRTHAEAEEFFE--G-LELV 242 (277)
T ss_dssp HTTSCTTCEEEEEEECCTTS----H---HHHHHHHHHHHH--------------TTCCCCCCCHHHHHHTTT--T-SEEC
T ss_pred HHhCCCCcEEEEEeccCCCC----H---HHHHHHHHHHHh--------------cCCCCccCCHHHHHHHhC--C-Cccc
Confidence 67799999999998876421 1 112222222221 234889999999999995 5 8877
Q ss_pred EEEeEeec-CCCC
Q 042009 178 RLGHFEID-WDGG 189 (262)
Q Consensus 178 ~le~~~~~-w~~~ 189 (262)
.-.+...+ |-|.
T Consensus 243 ePG~v~~~~Wrp~ 255 (277)
T 3giw_A 243 EPGIVQVHKWHPD 255 (277)
T ss_dssp TTCSEEGGGSSCC
T ss_pred CCcEeecccccCC
Confidence 66666554 7663
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.57 E-value=0.08 Score=43.63 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=58.7
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+..--+|++++|+++++.++||+.. | ..+|+.=.+-|+
T Consensus 95 ~d~~~~~~~~~~fD~v~~~~~l~~~~~-~---------------------------------------~~~l~~~~~~Lk 134 (219)
T 3dh0_A 95 SEENKIPLPDNTVDFIFMAFTFHELSE-P---------------------------------------LKFLEELKRVAK 134 (219)
T ss_dssp CBTTBCSSCSSCEEEEEEESCGGGCSS-H---------------------------------------HHHHHHHHHHEE
T ss_pred cccccCCCCCCCeeEEEeehhhhhcCC-H---------------------------------------HHHHHHHHHHhC
Confidence 455555588999999999999999732 1 112222356799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
|||+++++.......... .-.....+.+|+...+++.| |++.+...+
T Consensus 135 pgG~l~i~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 181 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDKG--------------------------------PPPEEVYSEWEVGLILEDAG-IRVGRVVEV 181 (219)
T ss_dssp EEEEEEEEEECSSCCSSS--------------------------------CCGGGSCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred CCeEEEEEEecccccccC--------------------------------CchhcccCHHHHHHHHHHCC-CEEEEEEee
Confidence 999999987655432110 01123358999999999998 988776544
No 39
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.54 E-value=0.019 Score=50.34 Aligned_cols=25 Identities=20% Similarity=0.473 Sum_probs=21.1
Q ss_pred CccccccCCCCccceEEcccccccc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+++-+--||++|+|+++++.++||+
T Consensus 88 ~~~e~~~~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 88 APAEDTGLPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp CCTTCCCCCSSCEEEEEECSCCTTC
T ss_pred hhhhhhcccCCcccEEEEeeehhHh
Confidence 4555556899999999999999996
No 40
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=95.53 E-value=0.03 Score=47.50 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=63.4
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+++..--+|++++|+++++.++||+.. | . .+|+.=.+=|
T Consensus 96 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L 135 (253)
T 3g5l_A 96 QKAIEDIAIEPDAYNVVLSSLALHYIAS-F------------------------D---------------DICKKVYINL 135 (253)
T ss_dssp ECCGGGCCCCTTCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHHE
T ss_pred EcchhhCCCCCCCeEEEEEchhhhhhhh-H------------------------H---------------HHHHHHHHHc
Confidence 3455554578999999999999999732 1 1 1233335679
Q ss_pred ccCceEEEEecccCCCCCC---------CchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCC
Q 042009 102 VAGGRMVLSLMGRRSIDPT---------TEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEG 172 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~---------~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~g 172 (262)
+|||++++........... ....... +.....++.... ....-....|.++.+|+.+.+++.|
T Consensus 136 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l~~aG 207 (253)
T 3g5l_A 136 KSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWP-------VDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTLLKNG 207 (253)
T ss_dssp EEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEE-------ECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCccccCccccceeccCCceEEEE-------eccccccceEEE-eeccccCccEecCHHHHHHHHHHcC
Confidence 9999999986532100000 0000000 000000111110 0011145677789999999999999
Q ss_pred ceEEEEEEeE
Q 042009 173 SFIIDRLGHF 182 (262)
Q Consensus 173 sF~I~~le~~ 182 (262)
|++..++..
T Consensus 208 -F~~~~~~e~ 216 (253)
T 3g5l_A 208 -FQINSVIEP 216 (253)
T ss_dssp -EEEEEEECC
T ss_pred -CeeeeeecC
Confidence 998877754
No 41
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.23 E-value=0.019 Score=47.26 Aligned_cols=65 Identities=18% Similarity=0.259 Sum_probs=42.1
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcc-----cccCcccCCHHHHHHHHhcCC
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDS-----FNAPYYAPCPEELKMAIQKEG 172 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~ds-----fn~P~y~ps~~Ev~~~ie~~g 172 (262)
.+-|+|||++++............. ..+... ..... ...+.++++.+|+...+++.|
T Consensus 139 ~~~L~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 139 RTLLVPGGALVIQTLHPWSVADGDY-----------------QDGWRE-ESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp HHTEEEEEEEEEEECCTTTTCTTCC-----------------SCEEEE-ECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred HHHhCCCeEEEEEecCccccCcccc-----------------ccccch-hhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 5679999999999876543221000 011100 00111 245678899999999999999
Q ss_pred ceEEEEEEe
Q 042009 173 SFIIDRLGH 181 (262)
Q Consensus 173 sF~I~~le~ 181 (262)
|++.+++.
T Consensus 201 -f~~~~~~~ 208 (227)
T 3e8s_A 201 -LRLVSLQE 208 (227)
T ss_dssp -EEEEEEEC
T ss_pred -CeEEEEec
Confidence 99988775
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=95.21 E-value=0.24 Score=43.48 Aligned_cols=110 Identities=10% Similarity=0.060 Sum_probs=65.1
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+.+.+-.+| +++|+++++.++|++.. | .. ...+|+.=.+-
T Consensus 175 ~~~d~~~~~~~-~~fD~v~~~~~~~~~~~-~------------------------~~------------~~~~l~~~~~~ 216 (305)
T 3ocj_A 175 HRQDAWKLDTR-EGYDLLTSNGLNIYEPD-D------------------------AR------------VTELYRRFWQA 216 (305)
T ss_dssp EECCGGGCCCC-SCEEEEECCSSGGGCCC-H------------------------HH------------HHHHHHHHHHH
T ss_pred EECchhcCCcc-CCeEEEEECChhhhcCC-H------------------------HH------------HHHHHHHHHHh
Confidence 34666665567 99999999999998533 1 10 11233333677
Q ss_pred hccCceEEEEecccCCCCCCCc-----hh-hHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCce
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTE-----ES-CYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSF 174 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~-----~~-~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF 174 (262)
|+|||++++...+++....... .. ..........+.+....+ -...++.+|+...+++.| |
T Consensus 217 LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-F 283 (305)
T 3ocj_A 217 LKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPR------------WNALRTHAQTRAQLEEAG-F 283 (305)
T ss_dssp EEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCS------------CCCCCCHHHHHHHHHHTT-C
T ss_pred cCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhh------------hhccCCHHHHHHHHHHCC-C
Confidence 9999999999887654322111 10 001111222222211111 113579999999999999 9
Q ss_pred EEEEEEe
Q 042009 175 IIDRLGH 181 (262)
Q Consensus 175 ~I~~le~ 181 (262)
++.+.+.
T Consensus 284 ~~v~~~~ 290 (305)
T 3ocj_A 284 TDLRFED 290 (305)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9877764
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=95.18 E-value=0.13 Score=44.22 Aligned_cols=110 Identities=17% Similarity=0.185 Sum_probs=64.3
Q ss_pred cCccccccC-CCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 22 AGSFYDRLF-PDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 22 pgSFY~rlf-P~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
-+.+..--+ |++++|+++++.++||+-. . ..|...+|+.=++=
T Consensus 120 ~~d~~~~~~~~~~~fD~v~~~~~l~~~~~------~------------------------------~~~~~~~l~~~~~~ 163 (298)
T 1ri5_A 120 AQDSYGRHMDLGKEFDVISSQFSFHYAFS------T------------------------------SESLDIAQRNIARH 163 (298)
T ss_dssp ESCTTTSCCCCSSCEEEEEEESCGGGGGS------S------------------------------HHHHHHHHHHHHHT
T ss_pred ECCccccccCCCCCcCEEEECchhhhhcC------C------------------------------HHHHHHHHHHHHHh
Confidence 344444345 6899999999999998521 0 11233455555777
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhc-----------cCCh---hhh-----ccc-ccCcccCC
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTER-----------LIEE---EKL-----DSF-NAPYYAPC 160 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eG-----------li~~---e~~-----dsf-n~P~y~ps 160 (262)
|+|||++++..+.... +...+ .+..-.+ .++. .+. +.. ..|.+..+
T Consensus 164 LkpgG~l~~~~~~~~~----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 229 (298)
T 1ri5_A 164 LRPGGYFIMTVPSRDV----------ILERY----KQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVD 229 (298)
T ss_dssp EEEEEEEEEEEECHHH----------HHHHH----HHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCC
T ss_pred cCCCCEEEEEECCHHH----------HHHHH----ccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccC
Confidence 9999999998764311 11111 1100000 0000 000 000 23456789
Q ss_pred HHHHHHHHhcCCceEEEEEEeE
Q 042009 161 PEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 161 ~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
++|++..+++.| |++.+.+.+
T Consensus 230 ~~~l~~ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 230 FTRMVDGFKRLG-LSLVERKGF 250 (298)
T ss_dssp HHHHHHHHHTTT-EEEEEEEEH
T ss_pred HHHHHHHHHHcC-CEEEEecCH
Confidence 999999999999 988877655
No 44
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.11 E-value=0.095 Score=44.85 Aligned_cols=102 Identities=8% Similarity=0.011 Sum_probs=59.4
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|+++.|+++|..++|++.. | . .+++....=++|||++++
T Consensus 118 ~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 118 IADQHFDRVVLAHSLWYFAS-A------------------------N---------------ALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp GTTCCCSEEEEESCGGGSSC-H------------------------H---------------HHHHHHHHHTTTCSEEEE
T ss_pred CCCCCEEEEEEccchhhCCC-H------------------------H---------------HHHHHHHHHhCCCCEEEE
Confidence 57899999999999998643 1 1 012222333446999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
.-...+...+ .....++..+.+...... + .+........++.+++.+.+++.| |++.+.+.+
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~s~~~l~~~l~~aG-f~~~~~~~~ 219 (275)
T 3bkx_A 158 AEWSMQPTAL--DQIGHLQAAMIQGLLYAI--A------PSDVANIRTLITPDTLAQIAHDNT-WTYTAGTIV 219 (275)
T ss_dssp EEECSSCSSG--GGHHHHHHHHHHHHHHHH--S------CCTTCSCCCCCCHHHHHHHHHHHT-CEEEECCCB
T ss_pred EEecCCCCch--hhhhHHHHHHHHHHHhhc--c------ccccccccccCCHHHHHHHHHHCC-CeeEEEEEe
Confidence 8876654321 111112222221111111 0 011223445789999999999998 998877765
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.02 E-value=0.041 Score=48.68 Aligned_cols=96 Identities=9% Similarity=0.042 Sum_probs=61.9
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+.+--+|++++|+++++.++||+. |.. +|+.=.+-|+
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~~~--~~~---------------------------------------~l~~~~~~Lk 212 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMYVD--LHD---------------------------------------LFSEHSRFLK 212 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGGSC--HHH---------------------------------------HHHHHHHHEE
T ss_pred CChhcCCCCCCCEeEEEECCchhhCC--HHH---------------------------------------HHHHHHHHcC
Confidence 45554447899999999999999973 211 1222256799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
|||++++......+..... ...+..+.. . ..| ..++.+++.+.+++.| |++...+.+
T Consensus 213 pgG~l~~~~~~~~~~~~~~---~~~~~~~~~--------~----------~~~-~~~s~~~~~~~l~~aG-f~~~~~~~~ 269 (312)
T 3vc1_A 213 VGGRYVTITGCWNPRYGQP---SKWVSQINA--------H----------FEC-NIHSRREYLRAMADNR-LVPHTIVDL 269 (312)
T ss_dssp EEEEEEEEEEEECTTTCSC---CHHHHHHHH--------H----------HTC-CCCBHHHHHHHHHTTT-EEEEEEEEC
T ss_pred CCcEEEEEEccccccccch---hHHHHHHHh--------h----------hcC-CCCCHHHHHHHHHHCC-CEEEEEEeC
Confidence 9999999887665432111 111221111 1 111 4788999999999998 988877755
No 46
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=94.93 E-value=0.08 Score=46.24 Aligned_cols=101 Identities=19% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|-.+.|+++|+++|||+.. . |...+|+.=.+=|+|||+|++
T Consensus 135 ~~~~~~d~v~~~~~l~~~~~---~-----------------------------------~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 135 IAIENASMVVLNFTLQFLEP---S-----------------------------------ERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp CCCCSEEEEEEESCGGGSCH---H-----------------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccceeeeeeeecCc---h-----------------------------------hHhHHHHHHHHHcCCCcEEEE
Confidence 56677999999999999632 1 011223333567999999998
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHH-hccCChhh---hcccccCcccCCHHHHHHHHhcCCceEE
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVT-ERLIEEEK---LDSFNAPYYAPCPEELKMAIQKEGSFII 176 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~-eGli~~e~---~dsfn~P~y~ps~~Ev~~~ie~~gsF~I 176 (262)
.=.....+ ...-+.+...+.+... .|.-+.+- .....-.....|.+|+++.+++.| |+-
T Consensus 177 ~e~~~~~~-------~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 177 SEKFSFED-------AKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEBCCSS-------HHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred EeccCCCC-------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 75544331 1112223333333322 24322110 111111223458999999999999 763
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=94.85 E-value=0.34 Score=40.75 Aligned_cols=95 Identities=14% Similarity=0.022 Sum_probs=57.4
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+++.+-.+ ++++|+++|..++|++.. |.. +|+.=.+=
T Consensus 91 ~~~d~~~~~~-~~~fD~V~~~~~~~~~~~-~~~---------------------------------------~l~~~~r~ 129 (256)
T 1nkv_A 91 IHNDAAGYVA-NEKCDVAACVGATWIAGG-FAG---------------------------------------AEELLAQS 129 (256)
T ss_dssp EESCCTTCCC-SSCEEEEEEESCGGGTSS-SHH---------------------------------------HHHHHTTS
T ss_pred EECChHhCCc-CCCCCEEEECCChHhcCC-HHH---------------------------------------HHHHHHHH
Confidence 3456655444 889999999999998653 111 12222567
Q ss_pred hccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 101 MVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 101 L~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|+|||++++.......... .. .+...| .. ......++.+++...+++.| |++..++
T Consensus 130 LkpgG~l~~~~~~~~~~~~-~~-------~~~~~~--------~~-------~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 185 (256)
T 1nkv_A 130 LKPGGIMLIGEPYWRQLPA-TE-------EIAQAC--------GV-------SSTSDFLTLPGLVGAFDDLG-YDVVEMV 185 (256)
T ss_dssp EEEEEEEEEEEEEETTCCS-SH-------HHHHTT--------TC-------SCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred cCCCeEEEEecCcccCCCC-hH-------HHHHHH--------hc-------ccccccCCHHHHHHHHHHCC-CeeEEEE
Confidence 9999999998764432211 10 011111 00 01125679999999999998 8766544
No 48
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=94.83 E-value=0.11 Score=45.56 Aligned_cols=98 Identities=15% Similarity=0.179 Sum_probs=60.9
Q ss_pred cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 042009 29 LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 29 lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 108 (262)
.+|-++.|+++++..|||++.- . +..+ |+.=++-|+|||+|+
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~--~---------------------~~~~---------------l~~~~~~L~pGG~l~ 193 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD--V---------------------VDRV---------------VGAYRDALAPGSYLF 193 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT--T---------------------HHHH---------------HHHHHHHSCTTCEEE
T ss_pred cCCCCCCEEEEEechhhhCCcH--H---------------------HHHH---------------HHHHHHhCCCCcEEE
Confidence 4676789999999999998652 0 1111 111156699999999
Q ss_pred EEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeEeec-CC
Q 042009 109 LSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEID-WD 187 (262)
Q Consensus 109 l~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~~-w~ 187 (262)
+.....+. + . . ++.+...+.. .| .|.+.++.+|+.+.+ .| |++........+ |.
T Consensus 194 i~~~~~~~--~--~--~--~~~~~~~~~~---~~-----------~~~~~~s~~ei~~~l--~G-~~l~~~g~~~~~~w~ 248 (274)
T 2qe6_A 194 MTSLVDTG--L--P--A--QQKLARITRE---NL-----------GEGWARTPEEIERQF--GD-FELVEPGVVYTALWR 248 (274)
T ss_dssp EEEEBCSS--C--H--H--HHHHHHHHHH---HH-----------SCCCCBCHHHHHHTT--TT-CEECTTCSEEGGGSS
T ss_pred EEEecCcc--h--H--H--HHHHHHHHHh---cC-----------CCCccCCHHHHHHHh--CC-CeEccCcEecccccc
Confidence 99887532 1 1 0 1111111111 11 367789999999999 35 887765555444 65
Q ss_pred CC
Q 042009 188 GG 189 (262)
Q Consensus 188 ~~ 189 (262)
+.
T Consensus 249 p~ 250 (274)
T 2qe6_A 249 PD 250 (274)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 49
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.52 E-value=0.4 Score=42.50 Aligned_cols=99 Identities=17% Similarity=0.091 Sum_probs=61.0
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|+ .-+|. +.|++++++.||..+. . +...+|+.=+
T Consensus 222 ~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~---~-----------------------------------~~~~~l~~~~ 261 (332)
T 3i53_A 222 QVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD---L-----------------------------------SAVAILRRCA 261 (332)
T ss_dssp EEEECCTT-SCCCC-SCSEEEEESCGGGSCH---H-----------------------------------HHHHHHHHHH
T ss_pred EEecCCCC-CCCCC-CCcEEEEehhhccCCH---H-----------------------------------HHHHHHHHHH
Confidence 34568888 44677 8999999999986432 1 1122333336
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+-|+|||++++.-.-.++..+ ...+++.. |+.. .-..++.+|+++.+++.| |++.+
T Consensus 262 ~~L~pgG~l~i~e~~~~~~~~-----~~~~d~~~-----~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~ 317 (332)
T 3i53_A 262 EAAGSGGVVLVIEAVAGDEHA-----GTGMDLRM-----LTYF-------------GGKERSLAELGELAAQAG-LAVRA 317 (332)
T ss_dssp HHHTTTCEEEEEECCCC---C-----CHHHHHHH-----HHHH-------------SCCCCCHHHHHHHHHHTT-EEEEE
T ss_pred HhcCCCCEEEEEeecCCCCCc-----cHHHHHHH-----HhhC-------------CCCCCCHHHHHHHHHHCC-CEEEE
Confidence 678999999997654443311 11222211 1111 224579999999999999 88776
Q ss_pred EEe
Q 042009 179 LGH 181 (262)
Q Consensus 179 le~ 181 (262)
...
T Consensus 318 ~~~ 320 (332)
T 3i53_A 318 AHP 320 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 50
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=94.44 E-value=0.085 Score=44.62 Aligned_cols=96 Identities=13% Similarity=0.087 Sum_probs=61.9
Q ss_pred Cccccc-cCCC---CccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 23 GSFYDR-LFPD---KSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 23 gSFY~r-lfP~---~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
+...+- .+|+ +++|+++++.+||++.. .+ .|...+|+.=.
T Consensus 142 ~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~---------------------------------~~~~~~l~~~~ 185 (265)
T 2i62_A 142 CDVTQSQPLGGVSLPPADCLLSTLCLDAACP---DL---------------------------------PAYRTALRNLG 185 (265)
T ss_dssp CCTTSSSTTTTCCCCCEEEEEEESCHHHHCS---SH---------------------------------HHHHHHHHHHH
T ss_pred eeeccCCCCCccccCCccEEEEhhhhhhhcC---Ch---------------------------------HHHHHHHHHHH
Confidence 444432 2356 89999999999997543 11 12233444446
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+=|+|||+|++......+ .. ..| ....+.+..+.+++...+++.| |++..
T Consensus 186 ~~LkpgG~li~~~~~~~~----~~-----------------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~ 235 (265)
T 2i62_A 186 SLLKPGGFLVMVDALKSS----YY-----------------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQ 235 (265)
T ss_dssp TTEEEEEEEEEEEESSCC----EE-----------------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEE
T ss_pred hhCCCCcEEEEEecCCCc----eE-----------------EcC--------CccccccccCHHHHHHHHHHCC-CEEEE
Confidence 779999999998743211 00 001 1223445678999999999998 99988
Q ss_pred EEeEee
Q 042009 179 LGHFEI 184 (262)
Q Consensus 179 le~~~~ 184 (262)
++....
T Consensus 236 ~~~~~~ 241 (265)
T 2i62_A 236 FEVISQ 241 (265)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 887653
No 51
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.43 E-value=0.068 Score=43.62 Aligned_cols=102 Identities=8% Similarity=0.033 Sum_probs=58.1
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+..--+|++++|+++++.++||+.. +. .+|+.=.+-|+
T Consensus 100 ~d~~~~~~~~~~~D~v~~~~~l~~~~~-------------------------~~---------------~~l~~~~~~L~ 139 (219)
T 3dlc_A 100 GDVHNIPIEDNYADLIVSRGSVFFWED-------------------------VA---------------TAFREIYRILK 139 (219)
T ss_dssp CBTTBCSSCTTCEEEEEEESCGGGCSC-------------------------HH---------------HHHHHHHHHEE
T ss_pred cCHHHCCCCcccccEEEECchHhhccC-------------------------HH---------------HHHHHHHHhCC
Confidence 455554588999999999999999722 11 12333356799
Q ss_pred cCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 103 AGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 103 ~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
|||++++...-.+. .+.+.+...+.... ..-...+.-.....+.+|++..+++.| |++.++.
T Consensus 140 pgG~l~~~~~~~~~---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~ 201 (219)
T 3dlc_A 140 SGGKTYIGGGFGNK---------ELRDSISAEMIRKN------PDWKEFNRKNISQENVERFQNVLDEIG-ISSYEII 201 (219)
T ss_dssp EEEEEEEEECCSSH---------HHHHHHHHHHHHHC------TTHHHHHHHHSSHHHHHHHHHHHHHHT-CSSEEEE
T ss_pred CCCEEEEEeccCcH---------HHHHHHHHHHHHhH------HHHHhhhhhccccCCHHHHHHHHHHcC-CCeEEEE
Confidence 99999987532211 12222222222210 000001111123338899999999998 7755444
No 52
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=94.31 E-value=0.11 Score=43.81 Aligned_cols=92 Identities=10% Similarity=0.020 Sum_probs=60.2
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..-.+|++++|++++..++|++.. | ++..+|+.=.+=|
T Consensus 134 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~~~l~~~~~~L 175 (241)
T 2ex4_A 134 CCGLQDFTPEPDSYDVIWIQWVIGHLTD-Q-------------------------------------HLAEFLRRCKGSL 175 (241)
T ss_dssp ECCGGGCCCCSSCEEEEEEESCGGGSCH-H-------------------------------------HHHHHHHHHHHHE
T ss_pred EcChhhcCCCCCCEEEEEEcchhhhCCH-H-------------------------------------HHHHHHHHHHHhc
Confidence 3445555577889999999999998543 0 1123344445679
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++.-...... . .++ . .-+.+.++.+|++..+++.| |++.+.+.
T Consensus 176 kpgG~l~i~~~~~~~~----~----~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 224 (241)
T 2ex4_A 176 RPNGIIVIKDNMAQEG----V----ILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLLAEER 224 (241)
T ss_dssp EEEEEEEEEEEEBSSS----E----EEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCeEEEEEEccCCCc----c----eec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEEEeee
Confidence 9999999976654330 0 000 0 01234559999999999998 88877765
Q ss_pred E
Q 042009 182 F 182 (262)
Q Consensus 182 ~ 182 (262)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 4
No 53
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=94.15 E-value=0.06 Score=44.71 Aligned_cols=28 Identities=11% Similarity=0.233 Sum_probs=22.1
Q ss_pred CcccCCHHHHHHHHhcCCceEEEEEEeEee
Q 042009 155 PYYAPCPEELKMAIQKEGSFIIDRLGHFEI 184 (262)
Q Consensus 155 P~y~ps~~Ev~~~ie~~gsF~I~~le~~~~ 184 (262)
|.|..+.+|+++.+++ | |+|..++....
T Consensus 151 ~~~~~~~~el~~~~~~-g-f~i~~~~~~~~ 178 (203)
T 1pjz_A 151 PPFSVPQTWLHRVMSG-N-WEVTKVGGQDT 178 (203)
T ss_dssp CCCCCCHHHHHHTSCS-S-EEEEEEEESSC
T ss_pred CCCCCCHHHHHHHhcC-C-cEEEEeccccc
Confidence 4455789999999997 6 99988886643
No 54
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=94.14 E-value=0.46 Score=42.59 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=62.2
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|+ .-+| +.|+++++++||.++. + +...+|+.=.
T Consensus 235 ~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d--------------------------~------------~~~~~L~~~~ 273 (348)
T 3lst_A 235 KVVEGDFL-REVP--HADVHVLKRILHNWGD--------------------------E------------DSVRILTNCR 273 (348)
T ss_dssp EEEECCTT-TCCC--CCSEEEEESCGGGSCH--------------------------H------------HHHHHHHHHH
T ss_pred EEEecCCC-CCCC--CCcEEEEehhccCCCH--------------------------H------------HHHHHHHHHH
Confidence 44668888 5567 9999999999986432 0 1123344446
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+-|+|||++++.-...++..... ....+++ .-|+.. .-..++.+|+++.+++.| |++.+
T Consensus 274 ~~LkpgG~l~i~e~~~~~~~~~~--~~~~~d~-----~~~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~ 332 (348)
T 3lst_A 274 RVMPAHGRVLVIDAVVPEGNDAH--QSKEMDF-----MMLAAR-------------TGQERTAAELEPLFTAAG-LRLDR 332 (348)
T ss_dssp HTCCTTCEEEEEECCBCSSSSCC--HHHHHHH-----HHHHTT-------------SCCCCBHHHHHHHHHHTT-EEEEE
T ss_pred HhcCCCCEEEEEEeccCCCCCcc--hhhhcCh-----hhhhcC-------------CCcCCCHHHHHHHHHHCC-CceEE
Confidence 78999999998765444331111 1111111 111111 123578999999999999 98877
Q ss_pred EEe
Q 042009 179 LGH 181 (262)
Q Consensus 179 le~ 181 (262)
...
T Consensus 333 ~~~ 335 (348)
T 3lst_A 333 VVG 335 (348)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 55
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.08 E-value=0.27 Score=40.13 Aligned_cols=87 Identities=20% Similarity=0.183 Sum_probs=52.7
Q ss_pred ccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042009 24 SFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVA 103 (262)
Q Consensus 24 SFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 103 (262)
.+.+--+|++++|+++++.++||+.. | . .+|+.=.+=|+|
T Consensus 85 d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L~p 124 (211)
T 2gs9_A 85 WGEALPFPGESFDVVLLFTTLEFVED-V------------------------E---------------RVLLEARRVLRP 124 (211)
T ss_dssp CTTSCCSCSSCEEEEEEESCTTTCSC-H------------------------H---------------HHHHHHHHHEEE
T ss_pred ccccCCCCCCcEEEEEEcChhhhcCC-H------------------------H---------------HHHHHHHHHcCC
Confidence 33333478889999999999998642 1 1 122222566999
Q ss_pred CceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCC
Q 042009 104 GGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEG 172 (262)
Q Consensus 104 GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~g 172 (262)
||+++++.+.+.+ .|..+. ..+...|. ...-...+.|.+|+++.++ |
T Consensus 125 gG~l~i~~~~~~~----------~~~~~~---~~~~~~~~-------~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 125 GGALVVGVLEALS----------PWAALY---RRLGEKGV-------LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEEEEEECTTS----------HHHHHH---HHHHHTTC-------TTGGGCCCCCHHHHHHHHC--S
T ss_pred CCEEEEEecCCcC----------cHHHHH---HHHhhccC-------ccccccccCCHHHHHHHhc--C
Confidence 9999999876532 122111 11112221 1111345679999999999 7
No 56
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=94.04 E-value=0.42 Score=40.78 Aligned_cols=102 Identities=19% Similarity=0.187 Sum_probs=61.9
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..--+|++++|++++..++||+.. | + .+|+.=.+-|
T Consensus 82 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L 121 (261)
T 3ege_A 82 TGYAENLALPDKSVDGVISILAIHHFSH-L------------------------E---------------KSFQEMQRII 121 (261)
T ss_dssp CCCTTSCCSCTTCBSEEEEESCGGGCSS-H------------------------H---------------HHHHHHHHHB
T ss_pred ECchhhCCCCCCCEeEEEEcchHhhccC-H------------------------H---------------HHHHHHHHHh
Confidence 3455444578899999999999998732 1 1 1122225678
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+ ||++++.....+.... . .....+... .. ....++++.+++. .+++.| |++.+.+.
T Consensus 122 k-gG~~~~~~~~~~~~~~--~---~~~~~~~~~----~~------------~~~~~~~~~~~~~-~l~~aG-F~~v~~~~ 177 (261)
T 3ege_A 122 R-DGTIVLLTFDIRLAQR--I---WLYDYFPFL----WE------------DALRFLPLDEQIN-LLQENT-KRRVEAIP 177 (261)
T ss_dssp C-SSCEEEEEECGGGCCC--C---GGGGTCHHH----HH------------HHHTSCCHHHHHH-HHHHHH-CSEEEEEE
T ss_pred C-CcEEEEEEcCCchhHH--H---HHHHHHHHH----hh------------hhhhhCCCHHHHH-HHHHcC-CCceeEEE
Confidence 9 9988888765433211 0 000111111 00 0123467889999 999888 98888888
Q ss_pred EeecCC
Q 042009 182 FEIDWD 187 (262)
Q Consensus 182 ~~~~w~ 187 (262)
+..++.
T Consensus 178 ~~~p~~ 183 (261)
T 3ege_A 178 FLLPHD 183 (261)
T ss_dssp CCEETT
T ss_pred ecCCCc
Confidence 877643
No 57
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=94.01 E-value=0.12 Score=43.18 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=23.7
Q ss_pred ccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 153 NAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 153 n~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
.+..|.++.+|+.+.+++.| |++..++..
T Consensus 186 ~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~ 214 (243)
T 3bkw_A 186 GVVKHHRTVGTTLNALIRSG-FAIEHVEEF 214 (243)
T ss_dssp SCCEEECCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred ceEEEeccHHHHHHHHHHcC-CEeeeeccC
Confidence 34567789999999999999 998877654
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=93.94 E-value=0.17 Score=44.18 Aligned_cols=83 Identities=13% Similarity=0.284 Sum_probs=48.8
Q ss_pred CccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEec
Q 042009 33 KSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLM 112 (262)
Q Consensus 33 ~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~ 112 (262)
+++|+++++.++||+ . |. .+|+.=.+-|+|||+|++...
T Consensus 112 ~~fD~V~~~~~l~~~-~-~~---------------------------------------~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-D-FE---------------------------------------KFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp SCEEEEEEESCGGGS-C-HH---------------------------------------HHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh-C-HH---------------------------------------HHHHHHHHhcCCCcEEEEEec
Confidence 899999999999998 2 11 112222567999999999766
Q ss_pred ccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCccc-CCHHHHHHHHhcCC
Q 042009 113 GRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYA-PCPEELKMAIQKEG 172 (262)
Q Consensus 113 g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~-ps~~Ev~~~ie~~g 172 (262)
+.+..... .. +...+.++... ++ ..-|.+. |..+.++..+++.|
T Consensus 151 ~~~~~~~~-~~-------~~~~~~~~~~~----~~----~~~~~w~~p~~~~~~~~l~~~g 195 (299)
T 3g5t_A 151 ADPIFPDY-PE-------FDDLMIEVPYG----KQ----GLGPYWEQPGRSRLRNMLKDSH 195 (299)
T ss_dssp EEEECTTC-GG-------GTTHHHHHHHC----TT----TTGGGSCTTHHHHHHTTTTTCC
T ss_pred CCccccCc-HH-------HHHHHHHhccC----cc----cccchhhchhhHHHHHhhhccC
Confidence 54322110 11 11122222111 01 2234444 88888899988877
No 59
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=93.90 E-value=0.83 Score=41.43 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=61.8
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|++ -+|+. |++++++.||+++. . +...+|+.=.
T Consensus 249 ~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~---~-----------------------------------~~~~~l~~~~ 287 (368)
T 3reo_A 249 EHLGGDMFD-GVPKG--DAIFIKWICHDWSD---E-----------------------------------HCLKLLKNCY 287 (368)
T ss_dssp EEEECCTTT-CCCCC--SEEEEESCGGGBCH---H-----------------------------------HHHHHHHHHH
T ss_pred EEEecCCCC-CCCCC--CEEEEechhhcCCH---H-----------------------------------HHHHHHHHHH
Confidence 446789887 57865 99999999985432 0 1122344336
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+-|+|||++++.=...++...... .. . ...+.++..... +..-..++.+|+++.+++.| |++.+
T Consensus 288 ~~L~pgG~l~i~e~~~~~~~~~~~-~~--~---~~~~~d~~~~~~---------~~~g~~rt~~e~~~ll~~AG-F~~v~ 351 (368)
T 3reo_A 288 AALPDHGKVIVAEYILPPSPDPSI-AT--K---VVIHTDALMLAY---------NPGGKERTEKEFQALAMASG-FRGFK 351 (368)
T ss_dssp HHSCTTCEEEEEECCCCSSCCCCH-HH--H---HHHHHHHHHHHH---------SSBCCCCCHHHHHHHHHHTT-CCEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCCch-hh--h---HHHhhhHHHHhh---------cCCCccCCHHHHHHHHHHCC-CeeeE
Confidence 779999999987554433211111 00 0 011112111110 01223478999999999999 88766
Q ss_pred EEeE
Q 042009 179 LGHF 182 (262)
Q Consensus 179 le~~ 182 (262)
....
T Consensus 352 ~~~~ 355 (368)
T 3reo_A 352 VASC 355 (368)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 60
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=93.82 E-value=0.81 Score=41.51 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=62.1
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|++ -+|.. |++++++.||.++. .|...+|+.=+
T Consensus 247 ~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d--------------------------------------~~~~~~L~~~~ 285 (364)
T 3p9c_A 247 THVGGDMFK-EVPSG--DTILMKWILHDWSD--------------------------------------QHCATLLKNCY 285 (364)
T ss_dssp EEEECCTTT-CCCCC--SEEEEESCGGGSCH--------------------------------------HHHHHHHHHHH
T ss_pred EEEeCCcCC-CCCCC--CEEEehHHhccCCH--------------------------------------HHHHHHHHHHH
Confidence 446789988 67866 99999999985321 11123344446
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+-|+|||++++.=...++...... .+. ...+.++.... .+..-..++.+|+++.+++.| |++.+
T Consensus 286 ~~L~pgG~l~i~e~~~~~~~~~~~----~~~--~~~~~d~~m~~---------~~~~g~~rt~~e~~~ll~~AG-F~~v~ 349 (364)
T 3p9c_A 286 DALPAHGKVVLVQCILPVNPEANP----SSQ--GVFHVDMIMLA---------HNPGGRERYEREFQALARGAG-FTGVK 349 (364)
T ss_dssp HHSCTTCEEEEEECCBCSSCCSSH----HHH--HHHHHHHHHHH---------HCSSCCCCBHHHHHHHHHHTT-CCEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCcch----hhh--hHHHhHHHHHh---------cccCCccCCHHHHHHHHHHCC-CceEE
Confidence 779999999987554433221111 111 01111211110 011223478999999999999 88776
Q ss_pred EEeE
Q 042009 179 LGHF 182 (262)
Q Consensus 179 le~~ 182 (262)
....
T Consensus 350 ~~~~ 353 (364)
T 3p9c_A 350 STYI 353 (364)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6544
No 61
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.82 E-value=0.54 Score=42.64 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=62.8
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|+ .-+|. +.|+++++..||+.+. +. ...+|+.=+
T Consensus 255 ~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d--------------------------~~------------~~~~L~~~~ 294 (369)
T 3gwz_A 255 EILPGDFF-ETIPD-GADVYLIKHVLHDWDD--------------------------DD------------VVRILRRIA 294 (369)
T ss_dssp EEEECCTT-TCCCS-SCSEEEEESCGGGSCH--------------------------HH------------HHHHHHHHH
T ss_pred EEeccCCC-CCCCC-CceEEEhhhhhccCCH--------------------------HH------------HHHHHHHHH
Confidence 34568888 45677 8999999999997432 10 112344446
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
+-|+|||++++.-...++... . ....++ +.-|+..| -..++.+|+++.+++.| |++.+
T Consensus 295 ~~L~pgG~l~i~e~~~~~~~~--~-~~~~~d-----~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~ 352 (369)
T 3gwz_A 295 TAMKPDSRLLVIDNLIDERPA--A-STLFVD-----LLLLVLVG-------------GAERSESEFAALLEKSG-LRVER 352 (369)
T ss_dssp TTCCTTCEEEEEEEBCCSSCC--H-HHHHHH-----HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEE
T ss_pred HHcCCCCEEEEEEeccCCCCC--C-chhHhh-----HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEE
Confidence 789999999997665544321 1 011111 11122222 23578999999999998 98877
Q ss_pred EEe
Q 042009 179 LGH 181 (262)
Q Consensus 179 le~ 181 (262)
+..
T Consensus 353 ~~~ 355 (369)
T 3gwz_A 353 SLP 355 (369)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 62
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.70 E-value=0.26 Score=39.16 Aligned_cols=77 Identities=13% Similarity=0.177 Sum_probs=50.8
Q ss_pred CccccccCCCCccceEEcc-cccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 23 GSFYDRLFPDKSLHFVHSS-SSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss-~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
+.+..--+|++++|+++++ ..+|+++. .+...+|+.=.+-|
T Consensus 96 ~d~~~~~~~~~~~D~i~~~~~~~~~~~~--------------------------------------~~~~~~l~~~~~~l 137 (195)
T 3cgg_A 96 GDLSVDQISETDFDLIVSAGNVMGFLAE--------------------------------------DGREPALANIHRAL 137 (195)
T ss_dssp CCTTTSCCCCCCEEEEEECCCCGGGSCH--------------------------------------HHHHHHHHHHHHHE
T ss_pred cccccCCCCCCceeEEEECCcHHhhcCh--------------------------------------HHHHHHHHHHHHHh
Confidence 3444434677888999887 56666421 11234455456779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
+|||++++....... .+.+++...+++.| |++.+..
T Consensus 138 ~~~G~l~~~~~~~~~------------------------------------------~~~~~~~~~l~~~G-f~~~~~~ 173 (195)
T 3cgg_A 138 GADGRAVIGFGAGRG------------------------------------------WVFGDFLEVAERVG-LELENAF 173 (195)
T ss_dssp EEEEEEEEEEETTSS------------------------------------------CCHHHHHHHHHHHT-EEEEEEE
T ss_pred CCCCEEEEEeCCCCC------------------------------------------cCHHHHHHHHHHcC-CEEeeee
Confidence 999999997643210 57888999999888 8876654
No 63
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=93.69 E-value=0.3 Score=42.27 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=56.9
Q ss_pred CccccccCCC-CccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 23 GSFYDRLFPD-KSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 23 gSFY~rlfP~-~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
|.+.+--++. +++|++++..+||+|. .. + .+ .+++.=++=|
T Consensus 140 ~D~~~l~~~~~~~FD~V~~~~~l~~l~---~~--~----------------------~~-----------~~l~~~~~~L 181 (252)
T 2gb4_A 140 CSIFDLPRANIGKFDRIWDRGALVAIN---PG--D----------------------HD-----------RYADIILSLL 181 (252)
T ss_dssp SCTTTGGGGCCCCEEEEEESSSTTTSC---GG--G----------------------HH-----------HHHHHHHHTE
T ss_pred CccccCCcccCCCEEEEEEhhhhhhCC---HH--H----------------------HH-----------HHHHHHHHHc
Confidence 5666544443 8999999999999973 21 0 01 1222225679
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++..+..+. + . ..-|.|..+++|+.+.++. + |+|..++.
T Consensus 182 kpGG~l~l~~~~~~~-------------------------~-----~---~~g~~~~~~~~el~~~l~~-~-f~v~~~~~ 226 (252)
T 2gb4_A 182 RKEFQYLVAVLSYDP-------------------------T-----K---HAGPPFYVPSAELKRLFGT-K-CSMQCLEE 226 (252)
T ss_dssp EEEEEEEEEEEECCT-------------------------T-----S---CCCSSCCCCHHHHHHHHTT-T-EEEEEEEE
T ss_pred CCCeEEEEEEEecCC-------------------------c-----c---CCCCCCCCCHHHHHHHhhC-C-eEEEEEec
Confidence 999999755433211 0 0 1124455789999999986 5 99999986
Q ss_pred Ee
Q 042009 182 FE 183 (262)
Q Consensus 182 ~~ 183 (262)
..
T Consensus 227 ~~ 228 (252)
T 2gb4_A 227 VD 228 (252)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 64
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=93.66 E-value=0.3 Score=38.45 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=53.1
Q ss_pred ccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceE
Q 042009 28 RLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRM 107 (262)
Q Consensus 28 rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~m 107 (262)
.-+|++++|+++++.++|++.. | . .+|+.=.+-|+|||++
T Consensus 69 ~~~~~~~~D~v~~~~~l~~~~~-~------------------------~---------------~~l~~~~~~L~pgG~l 108 (170)
T 3i9f_A 69 KEIPDNSVDFILFANSFHDMDD-K------------------------Q---------------HVISEVKRILKDDGRV 108 (170)
T ss_dssp GGSCTTCEEEEEEESCSTTCSC-H------------------------H---------------HHHHHHHHHEEEEEEE
T ss_pred CCCCCCceEEEEEccchhcccC-H------------------------H---------------HHHHHHHHhcCCCCEE
Confidence 3478899999999999998732 1 1 1222225679999999
Q ss_pred EEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 108 VLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 108 vl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
++.-....+...... .....+.+|++..++ | |++.+...+
T Consensus 109 ~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 109 IIIDWRKENTGIGPP--------------------------------LSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEEEECSSCCSSSSC--------------------------------GGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred EEEEcCccccccCch--------------------------------HhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 998766543211000 012358999999999 5 988776543
No 65
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=93.59 E-value=0.075 Score=43.83 Aligned_cols=20 Identities=25% Similarity=0.165 Sum_probs=16.9
Q ss_pred CHHHHHHHHhcCCceEEEEEE
Q 042009 160 CPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 160 s~~Ev~~~ie~~gsF~I~~le 180 (262)
+.+++...+++.| |++....
T Consensus 158 ~~~~~~~~l~~~G-f~~~~~~ 177 (215)
T 2zfu_A 158 DVRTFLRAVTKLG-FKIVSKD 177 (215)
T ss_dssp CHHHHHHHHHHTT-EEEEEEE
T ss_pred CHHHHHHHHHHCC-CEEEEEe
Confidence 8899999999988 8877654
No 66
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.59 E-value=0.52 Score=41.99 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=61.8
Q ss_pred eeccCcccccc-CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRL-FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 19 ~~vpgSFY~rl-fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
.-+.|.|.... ++++..|+++++..||+++. . +...+|+.=
T Consensus 232 ~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~---~-----------------------------------~~~~~l~~~ 273 (352)
T 3mcz_A 232 EFFEKNLLDARNFEGGAADVVMLNDCLHYFDA---R-----------------------------------EAREVIGHA 273 (352)
T ss_dssp EEEECCTTCGGGGTTCCEEEEEEESCGGGSCH---H-----------------------------------HHHHHHHHH
T ss_pred EEEeCCcccCcccCCCCccEEEEecccccCCH---H-----------------------------------HHHHHHHHH
Confidence 44667877654 35667999999999997532 0 122344444
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
.+-|+|||++++.-...++..... .+..+.... -|+.. .--..++.+|+++.+++.| |++.
T Consensus 274 ~~~L~pgG~l~i~e~~~~~~~~~~-----~~~~~~~~~-~~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~ 334 (352)
T 3mcz_A 274 AGLVKPGGALLILTMTMNDDRVTP-----ALSADFSLH-MMVNT------------NHGELHPTPWIAGVVRDAG-LAVG 334 (352)
T ss_dssp HHTEEEEEEEEEEEECCCTTSSSS-----HHHHHHHHH-HHHHS------------TTCCCCCHHHHHHHHHHTT-CEEE
T ss_pred HHHcCCCCEEEEEEeccCCCCCCC-----chHHHhhHH-HHhhC------------CCCCcCCHHHHHHHHHHCC-Ccee
Confidence 677999999999866554432111 111111111 11110 0122468999999999999 8877
Q ss_pred E
Q 042009 178 R 178 (262)
Q Consensus 178 ~ 178 (262)
+
T Consensus 335 ~ 335 (352)
T 3mcz_A 335 E 335 (352)
T ss_dssp E
T ss_pred e
Confidence 6
No 67
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=93.45 E-value=0.093 Score=48.25 Aligned_cols=86 Identities=10% Similarity=0.152 Sum_probs=57.9
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|++++|+++|+.+|||+.. | ..||+.=++=|+|||+|++
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d-~---------------------------------------~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPY-V---------------------------------------QSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTT-H---------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCEEEEEECChHHhcCC-H---------------------------------------HHHHHHHHHHcCCCeEEEE
Confidence 56899999999999999742 1 1233333667999999999
Q ss_pred EecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhccc-ccCcccCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 110 SLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSF-NAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 110 ~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsf-n~P~y~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
......+ + + .. ...+.+ .-...+.+.++++..+++.| |++...+.+
T Consensus 207 ~~~~~~~----------~---~--------~~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~ 253 (416)
T 4e2x_A 207 EDPYLGD----------I---V--------AK-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRL 253 (416)
T ss_dssp EEECHHH----------H---H--------HH-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EeCChHH----------h---h--------hh-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEc
Confidence 7653210 0 0 01 111222 23355689999999999999 998888876
No 68
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=93.20 E-value=0.18 Score=42.89 Aligned_cols=23 Identities=13% Similarity=0.161 Sum_probs=19.6
Q ss_pred cccCCHHHHHHHHhcCCceEEEEE
Q 042009 156 YYAPCPEELKMAIQKEGSFIIDRL 179 (262)
Q Consensus 156 ~y~ps~~Ev~~~ie~~gsF~I~~l 179 (262)
....+.+|++..+++.| |++..+
T Consensus 212 ~~~~t~~el~~ll~~aG-F~v~~~ 234 (263)
T 3pfg_A 212 ITLFTREQYERAFTAAG-LSVEFM 234 (263)
T ss_dssp EECCCHHHHHHHHHHTT-EEEEEE
T ss_pred EEeecHHHHHHHHHHCC-CEEEEe
Confidence 55679999999999999 887765
No 69
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.95 E-value=1 Score=40.29 Aligned_cols=103 Identities=16% Similarity=0.098 Sum_probs=59.2
Q ss_pred eccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 20 GVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAA 99 (262)
Q Consensus 20 ~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 99 (262)
-+.+.+.+ -+|.+ .|+++++..||.++. + +...+|+.=.+
T Consensus 236 ~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~--------------------------~------------~~~~~l~~~~~ 275 (374)
T 1qzz_A 236 VAEGDFFK-PLPVT-ADVVLLSFVLLNWSD--------------------------E------------DALTILRGCVR 275 (374)
T ss_dssp EEECCTTS-CCSCC-EEEEEEESCGGGSCH--------------------------H------------HHHHHHHHHHH
T ss_pred EEeCCCCC-cCCCC-CCEEEEeccccCCCH--------------------------H------------HHHHHHHHHHH
Confidence 35577776 45654 999999999986321 0 01123333367
Q ss_pred hhccCceEEEEec--ccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 100 EMVAGGRMVLSLM--GRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 100 EL~~GG~mvl~~~--g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
-|+|||++++.-. ..++.. . ..+..+...+ -|+..| -..++.+|+++.+++.| |++.
T Consensus 276 ~L~pgG~l~i~e~~~~~~~~~--~----~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~ 334 (374)
T 1qzz_A 276 ALEPGGRLLVLDRADVEGDGA--D----RFFSTLLDLR-MLTFMG-------------GRVRTRDEVVDLAGSAG-LALA 334 (374)
T ss_dssp HEEEEEEEEEEECCH-------------HHHHHHHHHH-HHHHHS-------------CCCCCHHHHHHHHHTTT-EEEE
T ss_pred hcCCCcEEEEEechhhcCCCC--C----cchhhhcchH-HHHhCC-------------CcCCCHHHHHHHHHHCC-CceE
Confidence 7999999998765 332211 0 1111111111 111111 24579999999999998 9987
Q ss_pred EEEeEe
Q 042009 178 RLGHFE 183 (262)
Q Consensus 178 ~le~~~ 183 (262)
+.....
T Consensus 335 ~~~~~~ 340 (374)
T 1qzz_A 335 SERTSG 340 (374)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 776553
No 70
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=92.74 E-value=0.89 Score=41.05 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=62.3
Q ss_pred EeeccCccccc--cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHH
Q 042009 18 ISGVAGSFYDR--LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLK 95 (262)
Q Consensus 18 ~~~vpgSFY~r--lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 95 (262)
+.-+.|+|+.. -+| ++.|++++++.||.++. + |...+|+
T Consensus 231 v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~--------------------------~------------~~~~~l~ 271 (363)
T 3dp7_A 231 IHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE--------------------------E------------EVISILT 271 (363)
T ss_dssp EEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH--------------------------H------------HHHHHHH
T ss_pred eEEEEccccccCCCCC-CCcCEEEEechhhhCCH--------------------------H------------HHHHHHH
Confidence 34467888875 367 89999999999985321 0 1123344
Q ss_pred HHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceE
Q 042009 96 SRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFI 175 (262)
Q Consensus 96 ~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~ 175 (262)
.=.+-|+|||++++.-...++... . ...+... ....+|... .......++.+|+++.+++.| |+
T Consensus 272 ~~~~~L~pgG~l~i~e~~~~~~~~--~--~~~~~~~-~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~ 335 (363)
T 3dp7_A 272 RVAQSIGKDSKVYIMETLWDRQRY--E--TASYCLT-QISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LE 335 (363)
T ss_dssp HHHHHCCTTCEEEEEECCTTSCSS--H--HHHHHHH-HHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EE
T ss_pred HHHHhcCCCcEEEEEeeccCCccc--c--chhhHHH-HhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-Ce
Confidence 336779999999887544433211 1 1111111 111111100 111234569999999999998 88
Q ss_pred EEEEE
Q 042009 176 IDRLG 180 (262)
Q Consensus 176 I~~le 180 (262)
+.+..
T Consensus 336 ~v~~~ 340 (363)
T 3dp7_A 336 VEEIQ 340 (363)
T ss_dssp ESCCC
T ss_pred EEEEE
Confidence 76554
No 71
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=92.52 E-value=0.091 Score=45.94 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=25.6
Q ss_pred cccCcccCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 152 FNAPYYAPCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 152 fn~P~y~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
+....+..+++|++..+++.| |++...+.+.
T Consensus 245 ~~~~~~~~t~~el~~ll~~aG-F~v~~~~~~~ 275 (299)
T 3g2m_A 245 CTHRRRLLAPDQVVRELVRSG-FDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEECHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred EEEEEEEeCHHHHHHHHHHCC-CEEEEEEecC
Confidence 445566779999999999999 9998888664
No 72
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=92.49 E-value=1.1 Score=40.51 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=61.4
Q ss_pred EeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 18 ISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 18 ~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
+.-++|+|+...+|. -|+++.++.||-. |.. +-..+|+.=
T Consensus 230 v~~~~gD~~~~~~~~--~D~~~~~~vlh~~---~d~-----------------------------------~~~~iL~~~ 269 (353)
T 4a6d_A 230 IDFQEGDFFKDPLPE--ADLYILARVLHDW---ADG-----------------------------------KCSHLLERI 269 (353)
T ss_dssp EEEEESCTTTSCCCC--CSEEEEESSGGGS---CHH-----------------------------------HHHHHHHHH
T ss_pred eeeecCccccCCCCC--ceEEEeeeecccC---CHH-----------------------------------HHHHHHHHH
Confidence 455789999876554 5999999999932 221 111234444
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
++-|+|||++++.=...+++..... ...++++ .=|+. ..--.||.+|+++++++.| |++.
T Consensus 270 ~~al~pgg~lli~e~~~~~~~~~~~-~~~~~dl-----~ml~~-------------~~g~ert~~e~~~ll~~AG-f~~v 329 (353)
T 4a6d_A 270 YHTCKPGGGILVIESLLDEDRRGPL-LTQLYSL-----NMLVQ-------------TEGQERTPTHYHMLLSSAG-FRDF 329 (353)
T ss_dssp HHHCCTTCEEEEEECCCCTTSCCCH-HHHHHHH-----HHHHS-------------SSCCCCCHHHHHHHHHHHT-CEEE
T ss_pred HhhCCCCCEEEEEEeeeCCCCCCCH-HHHHHHH-----HHHHh-------------CCCcCCCHHHHHHHHHHCC-CceE
Confidence 6779999999887544333221111 1111221 11111 1123589999999999999 8876
Q ss_pred EEE
Q 042009 178 RLG 180 (262)
Q Consensus 178 ~le 180 (262)
++.
T Consensus 330 ~v~ 332 (353)
T 4a6d_A 330 QFK 332 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 73
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.13 E-value=1.8 Score=38.04 Aligned_cols=101 Identities=19% Similarity=0.238 Sum_probs=60.7
Q ss_pred eeccCccccccCCCCccceEEcccccc-cccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLH-WLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alH-WLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
..+.|+|.+. +| ++.|++++...|| | |.. +...+|+.=
T Consensus 220 ~~~~~d~~~~-~~-~~~D~v~~~~vl~~~----~~~-----------------------------------~~~~~l~~~ 258 (334)
T 2ip2_A 220 SLVGGDMLQE-VP-SNGDIYLLSRIIGDL----DEA-----------------------------------ASLRLLGNC 258 (334)
T ss_dssp EEEESCTTTC-CC-SSCSEEEEESCGGGC----CHH-----------------------------------HHHHHHHHH
T ss_pred EEecCCCCCC-CC-CCCCEEEEchhccCC----CHH-----------------------------------HHHHHHHHH
Confidence 3456788874 66 6899999999998 5 211 012233333
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
.+-|+|||++++.-...++... ......+++. -|...| -..++.+|+++.+++.| |++.
T Consensus 259 ~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~-----~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~ 317 (334)
T 2ip2_A 259 REAMAGDGRVVVIERTISASEP--SPMSVLWDVH-----LFMACA-------------GRHRTTEEVVDLLGRGG-FAVE 317 (334)
T ss_dssp HHHSCTTCEEEEEECCBCSSSC--CHHHHHHHHH-----HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEE
T ss_pred HHhcCCCCEEEEEEeccCCCCC--cchhHHhhhH-----hHhhCC-------------CcCCCHHHHHHHHHHCC-Ccee
Confidence 5679999999998655443321 1111112211 111111 23468999999999999 8877
Q ss_pred EEEe
Q 042009 178 RLGH 181 (262)
Q Consensus 178 ~le~ 181 (262)
+...
T Consensus 318 ~~~~ 321 (334)
T 2ip2_A 318 RIVD 321 (334)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=92.09 E-value=0.63 Score=37.21 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=54.4
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+.+-.+ ++++|+++++.++||++. . |...+|+.=.+-|
T Consensus 86 ~~d~~~~~~-~~~~D~v~~~~~l~~~~~--~------------------------------------~~~~~l~~~~~~L 126 (199)
T 2xvm_A 86 VVDLNNLTF-DRQYDFILSTVVLMFLEA--K------------------------------------TIPGLIANMQRCT 126 (199)
T ss_dssp ECCGGGCCC-CCCEEEEEEESCGGGSCG--G------------------------------------GHHHHHHHHHHTE
T ss_pred EcchhhCCC-CCCceEEEEcchhhhCCH--H------------------------------------HHHHHHHHHHHhc
Confidence 344544334 789999999999999642 1 0122333336779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+|||++++.........+. + .-..+..+.+|+++.++. |+|.+.+.
T Consensus 127 ~~gG~l~~~~~~~~~~~~~---------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~ 172 (199)
T 2xvm_A 127 KPGGYNLIVAAMDTADYPC---------------------T----------VGFPFAFKEGELRRYYEG---WERVKYNE 172 (199)
T ss_dssp EEEEEEEEEEEBCCSSSCC---------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred CCCeEEEEEEeeccCCcCC---------------------C----------CCCCCccCHHHHHHHhcC---CeEEEecc
Confidence 9999988765433221100 0 012345688999999985 99887764
Q ss_pred E
Q 042009 182 F 182 (262)
Q Consensus 182 ~ 182 (262)
.
T Consensus 173 ~ 173 (199)
T 2xvm_A 173 D 173 (199)
T ss_dssp C
T ss_pred c
Confidence 3
No 75
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=91.75 E-value=0.29 Score=44.72 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=35.2
Q ss_pred cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 042009 29 LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 29 lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 108 (262)
-+|++++|+++|+.++||+.. | . .+|+.=.+=|+|||+|+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d-~------------------------~---------------~~l~~~~r~LkpgG~l~ 200 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN-K------------------------L---------------ALFKEIHRVLRDGGELY 200 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC-H------------------------H---------------HHHHHHHHHEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCC-H------------------------H---------------HHHHHHHHHcCCCCEEE
Confidence 588999999999999999643 1 1 12222356799999999
Q ss_pred EEecccCC
Q 042009 109 LSLMGRRS 116 (262)
Q Consensus 109 l~~~g~~~ 116 (262)
+.....+.
T Consensus 201 i~~~~~~~ 208 (383)
T 4fsd_A 201 FSDVYADR 208 (383)
T ss_dssp EEEEEESS
T ss_pred EEEecccc
Confidence 98766543
No 76
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=91.50 E-value=1.5 Score=38.36 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=60.2
Q ss_pred eccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 20 GVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAA 99 (262)
Q Consensus 20 ~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 99 (262)
-+.+.+..--+|.+ .|+++++..+|.++. + |...+|+.=.+
T Consensus 219 ~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~--------------------------~------------~~~~~l~~~~~ 259 (335)
T 2r3s_A 219 TIAGSAFEVDYGND-YDLVLLPNFLHHFDV--------------------------A------------TCEQLLRKIKT 259 (335)
T ss_dssp EEESCTTTSCCCSC-EEEEEEESCGGGSCH--------------------------H------------HHHHHHHHHHH
T ss_pred EEecccccCCCCCC-CcEEEEcchhccCCH--------------------------H------------HHHHHHHHHHH
Confidence 34567776545655 999999999986421 1 11223333356
Q ss_pred hhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEE
Q 042009 100 EMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRL 179 (262)
Q Consensus 100 EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~l 179 (262)
-|+|||++++.-...++... .......+++ .-|... -....++.+|+++.+++.| |++.+.
T Consensus 260 ~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~-----~~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~ 320 (335)
T 2r3s_A 260 ALAVEGKVIVFDFIPNSDRI-TPPDAAAFSL-----VMLATT------------PNGDAYTFAEYESMFSNAG-FSHSQL 320 (335)
T ss_dssp HEEEEEEEEEEECCCCTTSS-CSHHHHHHHH-----HHHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEE
T ss_pred hCCCCcEEEEEeecCCCCcC-CchHHHHHHH-----HHHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeE
Confidence 69999999988665543211 1111111221 111111 0234579999999999998 877665
Q ss_pred E
Q 042009 180 G 180 (262)
Q Consensus 180 e 180 (262)
.
T Consensus 321 ~ 321 (335)
T 2r3s_A 321 H 321 (335)
T ss_dssp E
T ss_pred E
Confidence 4
No 77
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.58 E-value=2.2 Score=38.16 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=62.2
Q ss_pred eeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 19 SGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 19 ~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.-+.|+|..--+|+. |+++++..||.++. .+...+|+.=.
T Consensus 243 ~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d--------------------------------------~~~~~~l~~~~ 282 (359)
T 1x19_A 243 RGIAVDIYKESYPEA--DAVLFCRILYSANE--------------------------------------QLSTIMCKKAF 282 (359)
T ss_dssp EEEECCTTTSCCCCC--SEEEEESCGGGSCH--------------------------------------HHHHHHHHHHH
T ss_pred EEEeCccccCCCCCC--CEEEEechhccCCH--------------------------------------HHHHHHHHHHH
Confidence 335678887666665 99999999984321 12233444446
Q ss_pred HhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHH-hccCChhhhcccccCcccCCHHHHHHHHhcCCceEEE
Q 042009 99 AEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVT-ERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIID 177 (262)
Q Consensus 99 ~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~-eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~ 177 (262)
+-|+|||++++.-...++.. ... +..+ + .|.. -|- -.....+++.+|+++.+++.| |++.
T Consensus 283 ~~L~pgG~l~i~e~~~~~~~--~~~----~~~~---~-~~~~~~~~--------g~~~~~~~t~~e~~~ll~~aG-f~~v 343 (359)
T 1x19_A 283 DAMRSGGRLLILDMVIDDPE--NPN----FDYL---S-HYILGAGM--------PFSVLGFKEQARYKEILESLG-YKDV 343 (359)
T ss_dssp TTCCTTCEEEEEEECCCCTT--SCC----HHHH---H-HHGGGGGS--------SCCCCCCCCGGGHHHHHHHHT-CEEE
T ss_pred HhcCCCCEEEEEecccCCCC--Cch----HHHH---H-HHHHhcCC--------CCcccCCCCHHHHHHHHHHCC-CceE
Confidence 77999999987765544321 111 1111 1 2221 110 011234589999999999998 8876
Q ss_pred EEEeE
Q 042009 178 RLGHF 182 (262)
Q Consensus 178 ~le~~ 182 (262)
+....
T Consensus 344 ~~~~~ 348 (359)
T 1x19_A 344 TMVRK 348 (359)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66543
No 78
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=90.25 E-value=0.29 Score=42.22 Aligned_cols=51 Identities=20% Similarity=0.193 Sum_probs=38.0
Q ss_pred CCCCccceEEcc-cccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 042009 30 FPDKSLHFVHSS-SSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 30 fP~~Svh~~~Ss-~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 108 (262)
+|+++.|+++++ .++|++...+.. ..++..+|+.=++=|+|||+++
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~---------------------------------~~~~~~~l~~~~~~LkpgG~l~ 172 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGD---------------------------------QSEHRLALKNIASMVRPGGLLV 172 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSS---------------------------------SHHHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCeEEEEEcChHHhhcCccccC---------------------------------HHHHHHHHHHHHHHcCCCeEEE
Confidence 899999999998 899997653221 1233445666678899999999
Q ss_pred EEecc
Q 042009 109 LSLMG 113 (262)
Q Consensus 109 l~~~g 113 (262)
+....
T Consensus 173 ~~~~~ 177 (293)
T 3thr_A 173 IDHRN 177 (293)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 98753
No 79
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.13 E-value=2 Score=38.20 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=60.4
Q ss_pred eccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 20 GVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAA 99 (262)
Q Consensus 20 ~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 99 (262)
-+.+++.+ -+|.+ .|+++++..||.++. + +...+|+.=.+
T Consensus 237 ~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~--------------------------~------------~~~~~l~~~~~ 276 (360)
T 1tw3_A 237 VVEGDFFE-PLPRK-ADAIILSFVLLNWPD--------------------------H------------DAVRILTRCAE 276 (360)
T ss_dssp EEECCTTS-CCSSC-EEEEEEESCGGGSCH--------------------------H------------HHHHHHHHHHH
T ss_pred EEeCCCCC-CCCCC-ccEEEEcccccCCCH--------------------------H------------HHHHHHHHHHH
Confidence 34567776 45654 999999999985321 1 11223333356
Q ss_pred hhccCceEEEEecc-cCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEE
Q 042009 100 EMVAGGRMVLSLMG-RRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDR 178 (262)
Q Consensus 100 EL~~GG~mvl~~~g-~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~ 178 (262)
-|+|||++++.-.. .++... ......+++ .-|+..| ...++.+|+++.+++.| |++.+
T Consensus 277 ~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~-----~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~ 335 (360)
T 1tw3_A 277 ALEPGGRILIHERDDLHENSF--NEQFTELDL-----RMLVFLG-------------GALRTREKWDGLAASAG-LVVEE 335 (360)
T ss_dssp TEEEEEEEEEEECCBCGGGCC--SHHHHHHHH-----HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEE
T ss_pred hcCCCcEEEEEEEeccCCCCC--cchhhhccH-----HHhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEE
Confidence 79999999987654 332211 111111111 1111112 24579999999999999 99887
Q ss_pred EEeEe
Q 042009 179 LGHFE 183 (262)
Q Consensus 179 le~~~ 183 (262)
.....
T Consensus 336 ~~~~~ 340 (360)
T 1tw3_A 336 VRQLP 340 (360)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 76653
No 80
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=89.20 E-value=0.41 Score=38.82 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=54.2
Q ss_pred cCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 042009 29 LFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 29 lfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mv 108 (262)
-+|++++|+++++.++|+++ +. |...+|+.=++=|+|||+++
T Consensus 84 ~~~~~~fD~v~~~~~l~~~~--~~------------------------------------~~~~~l~~~~~~LkpgG~l~ 125 (209)
T 2p8j_A 84 PFKDESMSFVYSYGTIFHMR--KN------------------------------------DVKEAIDEIKRVLKPGGLAC 125 (209)
T ss_dssp CSCTTCEEEEEECSCGGGSC--HH------------------------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCCceeEEEEcChHHhCC--HH------------------------------------HHHHHHHHHHHHcCCCcEEE
Confidence 37789999999999888863 11 12233444466799999999
Q ss_pred EEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEE
Q 042009 109 LSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFII 176 (262)
Q Consensus 109 l~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I 176 (262)
+.....++........ + .++.... .-+.......+.+.+|++..+++.|-+..
T Consensus 126 ~~~~~~~~~~~~~~~~--~------------~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 126 INFLTTKDERYNKGEK--I------------GEGEFLQ-LERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp EEEEETTSTTTTCSEE--E------------ETTEEEE-CC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred EEEecccchhccchhh--h------------cccccee-ccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 9998765432111000 0 0000000 00111122256689999999998774443
No 81
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=88.78 E-value=1.5 Score=37.55 Aligned_cols=86 Identities=12% Similarity=0.081 Sum_probs=54.9
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-+.+..-.+ +++.|+++++.++||++. | ++..+|+.=.+-|
T Consensus 173 ~~d~~~~~~-~~~fD~i~~~~~~~~~~~-~-------------------------------------~~~~~l~~~~~~L 213 (286)
T 3m70_A 173 LYDINAANI-QENYDFIVSTVVFMFLNR-E-------------------------------------RVPSIIKNMKEHT 213 (286)
T ss_dssp ECCGGGCCC-CSCEEEEEECSSGGGSCG-G-------------------------------------GHHHHHHHHHHTE
T ss_pred Eeccccccc-cCCccEEEEccchhhCCH-H-------------------------------------HHHHHHHHHHHhc
Confidence 345544333 889999999999999743 1 1112344446779
Q ss_pred ccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 102 VAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 102 ~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
+|||++++.......+.+. -..+.+..+.+|++..++. |++...+
T Consensus 214 kpgG~l~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 214 NVGGYNLIVAAMSTDDVPC-------------------------------PLPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp EEEEEEEEEEEBCCSSSCC-------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCC-------------------------------CCCccccCCHHHHHHHhcC---CEEEEEE
Confidence 9999988866543322110 0123467788999998864 8887765
No 82
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=88.73 E-value=2.7 Score=37.88 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=60.3
Q ss_pred EeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 18 ISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 18 ~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
+..+.|.|.. -+|. .|+++++..||+++. | +...+|+.=
T Consensus 254 v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-~-------------------------------------~~~~~l~~~ 292 (372)
T 1fp1_D 254 IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-E-------------------------------------KCIEFLSNC 292 (372)
T ss_dssp EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-H-------------------------------------HHHHHHHHH
T ss_pred CEEEeCCccc-CCCC--CCEEEEecccccCCH-H-------------------------------------HHHHHHHHH
Confidence 3456678887 4675 899999999997432 1 011234444
Q ss_pred HHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHH---HHhccCChhhhcccccCcccCCHHHHHHHHhcCCce
Q 042009 98 AAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSL---VTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSF 174 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dm---v~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF 174 (262)
.+-|+|||++++.-...++... .. ..+. ...+.++ +..| -..++.+|+++.+++.| |
T Consensus 293 ~~~L~pgG~l~i~e~~~~~~~~-~~----~~~~-~~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f 352 (372)
T 1fp1_D 293 HKALSPNGKVIIVEFILPEEPN-TS----EESK-LVSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG-F 352 (372)
T ss_dssp HHHEEEEEEEEEEEEEECSSCC-SS----HHHH-HHHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-C
T ss_pred HHhcCCCCEEEEEEeccCCCCc-cc----hHHH-HHHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-C
Confidence 6779999999988554433221 10 0000 0111111 1111 12359999999999998 8
Q ss_pred EEEEEEe
Q 042009 175 IIDRLGH 181 (262)
Q Consensus 175 ~I~~le~ 181 (262)
++.+...
T Consensus 353 ~~~~~~~ 359 (372)
T 1fp1_D 353 SKFQVAC 359 (372)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 7766554
No 83
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=88.48 E-value=1.8 Score=35.99 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=17.8
Q ss_pred cCCHHHHHHHHhcCCceEEEEEEeEe
Q 042009 158 APCPEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 158 ~ps~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
..+.+|+.+.+ .| |++.......
T Consensus 198 ~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 198 IFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp CCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred ccCHHHHHHHh--CC-CEEEeccccc
Confidence 36899999999 66 9987766553
No 84
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=88.28 E-value=0.8 Score=37.41 Aligned_cols=53 Identities=9% Similarity=0.176 Sum_probs=37.0
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+.+-. |++++|+++++.++||+.. |. ++..+|+.=++-|+
T Consensus 104 ~d~~~~~-~~~~fD~v~~~~~l~~~~~-~~------------------------------------~~~~~l~~~~~~L~ 145 (216)
T 3ofk_A 104 TDILQFS-TAELFDLIVVAEVLYYLED-MT------------------------------------QMRTAIDNMVKMLA 145 (216)
T ss_dssp CCTTTCC-CSCCEEEEEEESCGGGSSS-HH------------------------------------HHHHHHHHHHHTEE
T ss_pred cchhhCC-CCCCccEEEEccHHHhCCC-HH------------------------------------HHHHHHHHHHHHcC
Confidence 3444333 8999999999999999654 11 12234444467899
Q ss_pred cCceEEEEecc
Q 042009 103 AGGRMVLSLMG 113 (262)
Q Consensus 103 ~GG~mvl~~~g 113 (262)
|||++++....
T Consensus 146 pgG~l~~~~~~ 156 (216)
T 3ofk_A 146 PGGHLVFGSAR 156 (216)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCEEEEEecC
Confidence 99999997654
No 85
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=88.26 E-value=1.2 Score=35.98 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=43.9
Q ss_pred HHHHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcC
Q 042009 92 IFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKE 171 (262)
Q Consensus 92 ~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~ 171 (262)
.+|+.=.+=|+|||++++......... + ..| ...-+.+..+.+|+++.++
T Consensus 112 ~~l~~~~~~L~pgG~l~~~~~~~~~~~---------~-----------~~~--------~~~~~~~~~~~~~l~~~l~-- 161 (202)
T 2kw5_A 112 QLYPKVYQGLKPGGVFILEGFAPEQLQ---------Y-----------NTG--------GPKDLDLLPKLETLQSELP-- 161 (202)
T ss_dssp HHHHHHHTTCCSSEEEEEEEECTTTGG---------G-----------TSC--------CSSSGGGCCCHHHHHHHCS--
T ss_pred HHHHHHHHhcCCCcEEEEEEecccccc---------C-----------CCC--------CCCcceeecCHHHHHHHhc--
Confidence 344444677999999999988654310 0 011 1123578899999999999
Q ss_pred CceEEEEEEeEeec
Q 042009 172 GSFIIDRLGHFEID 185 (262)
Q Consensus 172 gsF~I~~le~~~~~ 185 (262)
| |+|..++....+
T Consensus 162 G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 162 S-LNWLIANNLERN 174 (202)
T ss_dssp S-SCEEEEEEEEEE
T ss_pred C-ceEEEEEEEEee
Confidence 6 999998887655
No 86
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=87.06 E-value=0.37 Score=42.81 Aligned_cols=114 Identities=11% Similarity=0.184 Sum_probs=61.5
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|+++.|++.|..+|||+-..+ .+ ..+|+.=++=|+|||+|++
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~-~~------------------------------------~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR-HY------------------------------------ATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT-TH------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHH-HH------------------------------------HHHHHHHHHHcCCCCEEEE
Confidence 7889999999999999964411 11 1234444788999999999
Q ss_pred EecccCCCCCCCch-hhHHHHHHHHHHHHHHHhccCChhh-------hcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 110 SLMGRRSIDPTTEE-SCYQWELLAQALMSLVTERLIEEEK-------LDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 110 ~~~g~~~~~~~~~~-~~~~~~~l~~al~dmv~eGli~~e~-------~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
+.+.+..-...... ...++...- .+.....-+-++.+. -..-..|-|.-+++|+.+.+++.| |++.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~G-l~lv~~~~ 245 (302)
T 2vdw_A 168 TTMDGDKLSKLTDKKTFIIHKNLP-SSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYG-FVLVDNVD 245 (302)
T ss_dssp EEECHHHHTTCCSCEEEECCSSSC-TTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred EeCCHHHHHHHHhcCCcccccccc-cccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCC-CEEEEecC
Confidence 88754221100000 000000000 000000000000000 012345667888899999999998 88877765
Q ss_pred E
Q 042009 182 F 182 (262)
Q Consensus 182 ~ 182 (262)
+
T Consensus 246 f 246 (302)
T 2vdw_A 246 F 246 (302)
T ss_dssp H
T ss_pred h
Confidence 5
No 87
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=86.94 E-value=2.4 Score=33.69 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=21.9
Q ss_pred CccccccCCCCccceEEcccccccccCCC
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVP 51 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P 51 (262)
|.+.+ .+|++++|+++|+..+||.+..+
T Consensus 68 ~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 68 ADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred CChhh-hcccCCCCEEEECCCCccCCccc
Confidence 45555 56779999999999999987643
No 88
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=86.25 E-value=3.6 Score=36.73 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=60.4
Q ss_pred EeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 18 ISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 18 ~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
+.-+.|.|+. -+| +.|++++++.||+++. | +...+|+.=
T Consensus 238 v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-~-------------------------------------~~~~~l~~~ 276 (358)
T 1zg3_A 238 LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-E-------------------------------------QSLKILKNS 276 (358)
T ss_dssp EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-H-------------------------------------HHHHHHHHH
T ss_pred cEEEeCccCC-CCC--CceEEEEcccccCCCH-H-------------------------------------HHHHHHHHH
Confidence 4456788887 466 4899999999997432 0 011233333
Q ss_pred HHhhcc---CceEEEEecccCCCCCCC--chhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCC
Q 042009 98 AAEMVA---GGRMVLSLMGRRSIDPTT--EESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEG 172 (262)
Q Consensus 98 a~EL~~---GG~mvl~~~g~~~~~~~~--~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~g 172 (262)
.+-|+| ||++++.-...++..... ......+++. -|+..| -..++.+|+++.+++.|
T Consensus 277 ~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~-----~~~~~~-------------g~~~t~~e~~~ll~~aG 338 (358)
T 1zg3_A 277 KEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLV-----MLTMFL-------------GKERTKQEWEKLIYDAG 338 (358)
T ss_dssp HHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHH-----HHHHHS-------------CCCEEHHHHHHHHHHTT
T ss_pred HHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHH-----HhccCC-------------CCCCCHHHHHHHHHHcC
Confidence 577899 999998755443322100 0001111111 111111 12469999999999999
Q ss_pred ceEEEEEEe
Q 042009 173 SFIIDRLGH 181 (262)
Q Consensus 173 sF~I~~le~ 181 (262)
|++.+...
T Consensus 339 -f~~~~~~~ 346 (358)
T 1zg3_A 339 -FSSYKITP 346 (358)
T ss_dssp -CCEEEEEE
T ss_pred -CCeeEEEe
Confidence 87766543
No 89
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=84.11 E-value=1.5 Score=36.14 Aligned_cols=24 Identities=13% Similarity=-0.070 Sum_probs=20.3
Q ss_pred cccCCHHHHHHHHhcCCceEEEEEE
Q 042009 156 YYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 156 ~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
....+.+|++..+++.| |++.+..
T Consensus 200 ~~~~~~~~l~~ll~~aG-f~~~~~~ 223 (246)
T 1y8c_A 200 ERAYKEEDIEKYLKHGQ-LNILDKV 223 (246)
T ss_dssp EECCCHHHHHHHHHHTT-EEEEEEE
T ss_pred EEcCCHHHHHHHHHHCC-CeEEEEE
Confidence 46679999999999999 9887664
No 90
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=83.35 E-value=1.7 Score=37.43 Aligned_cols=30 Identities=10% Similarity=-0.195 Sum_probs=20.5
Q ss_pred eEEeeccCccccccCCCCccceEEcccccc
Q 042009 16 CYISGVAGSFYDRLFPDKSLHFVHSSSSLH 45 (262)
Q Consensus 16 ~f~~~vpgSFY~rlfP~~Svh~~~Ss~alH 45 (262)
..+.+..+....--++..++|++++..+.|
T Consensus 129 ~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~ 158 (233)
T 4df3_A 129 FPILGDARFPEKYRHLVEGVDGLYADVAQP 158 (233)
T ss_dssp EEEESCTTCGGGGTTTCCCEEEEEECCCCT
T ss_pred eEEEEeccCccccccccceEEEEEEeccCC
Confidence 456666676666667788999888654444
No 91
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=83.20 E-value=6.1 Score=32.21 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=16.5
Q ss_pred cccCCCCccceEEcccccccc
Q 042009 27 DRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 27 ~rlfP~~Svh~~~Ss~alHWL 47 (262)
.+.+|++++|++++.+..+|.
T Consensus 104 ~~~~~~~~~D~i~~~~~~~~~ 124 (214)
T 1yzh_A 104 TDYFEDGEIDRLYLNFSDPWP 124 (214)
T ss_dssp GGTSCTTCCSEEEEESCCCCC
T ss_pred HhhcCCCCCCEEEEECCCCcc
Confidence 345889999999999776663
No 92
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=81.67 E-value=1.7 Score=35.47 Aligned_cols=24 Identities=4% Similarity=-0.151 Sum_probs=18.4
Q ss_pred ccccccCCCCccceEEcccccccc
Q 042009 24 SFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 24 SFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+.-..-++.+++|+++++.++||+
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~ 115 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIEVIEHL 115 (217)
T ss_dssp CTTSCCGGGCSCSEEEEESCGGGC
T ss_pred CcccccccCCCcCEEeeHHHHHcC
Confidence 443344566899999999999997
No 93
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=81.13 E-value=6.5 Score=33.69 Aligned_cols=25 Identities=8% Similarity=0.113 Sum_probs=18.4
Q ss_pred CccccccCCCCccceEEccccccccc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLS 48 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS 48 (262)
+.+.+-.+ ++++|++++..++|++.
T Consensus 79 ~d~~~~~~-~~~fD~v~~~~~l~~~~ 103 (284)
T 3gu3_A 79 GDATEIEL-NDKYDIAICHAFLLHMT 103 (284)
T ss_dssp SCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred cchhhcCc-CCCeeEEEECChhhcCC
Confidence 45554334 57999999999999864
No 94
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=80.81 E-value=1.2 Score=34.30 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=35.6
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|++++|++++...+||....+. + .. ........+|+.=.+=|+|||++++
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~---~---------------------~~-----~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAV---D---------------------IP-----RAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHH---H---------------------HH-----HHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCceeEEEECCCccccCCCcc---c---------------------hH-----HHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 67888999999888888543100 0 00 0111234556555677999999999
Q ss_pred Eeccc
Q 042009 110 SLMGR 114 (262)
Q Consensus 110 ~~~g~ 114 (262)
.....
T Consensus 135 ~~~~~ 139 (180)
T 1ej0_A 135 KVFQG 139 (180)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 87654
No 95
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=80.26 E-value=1.3 Score=35.72 Aligned_cols=66 Identities=17% Similarity=0.140 Sum_probs=43.6
Q ss_pred ccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 042009 24 SFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVA 103 (262)
Q Consensus 24 SFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~ 103 (262)
.+..--+|++++|++++..++|.+..... ..|+.. . ....|...+|+.=.+=|+|
T Consensus 97 d~~~~~~~~~~fD~v~~~~~~~~~~~~~~--------~~~~~~---------~--------~~~~~~~~~l~~~~~~Lkp 151 (215)
T 2pxx_A 97 DVRKLDFPSASFDVVLEKGTLDALLAGER--------DPWTVS---------S--------EGVHTVDQVLSEVSRVLVP 151 (215)
T ss_dssp CTTSCCSCSSCEEEEEEESHHHHHTTTCS--------CTTSCC---------H--------HHHHHHHHHHHHHHHHEEE
T ss_pred chhcCCCCCCcccEEEECcchhhhccccc--------cccccc---------c--------chhHHHHHHHHHHHHhCcC
Confidence 33333478899999999999987653111 122211 1 1234566777777788999
Q ss_pred CceEEEEeccc
Q 042009 104 GGRMVLSLMGR 114 (262)
Q Consensus 104 GG~mvl~~~g~ 114 (262)
||++++...+.
T Consensus 152 gG~li~~~~~~ 162 (215)
T 2pxx_A 152 GGRFISMTSAA 162 (215)
T ss_dssp EEEEEEEESCC
T ss_pred CCEEEEEeCCC
Confidence 99999987764
No 96
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=79.54 E-value=2.3 Score=34.75 Aligned_cols=25 Identities=12% Similarity=-0.079 Sum_probs=19.4
Q ss_pred CccccccCCCCccceEEcccccccc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
++....-++.+++|+++++.++|++
T Consensus 91 ~d~~~~~~~~~~fD~V~~~~~l~~~ 115 (219)
T 3jwg_A 91 SSLVYRDKRFSGYDAATVIEVIEHL 115 (219)
T ss_dssp CCSSSCCGGGTTCSEEEEESCGGGC
T ss_pred CcccccccccCCCCEEEEHHHHHhC
Confidence 3444445667899999999999997
No 97
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=78.29 E-value=13 Score=32.92 Aligned_cols=105 Identities=17% Similarity=0.166 Sum_probs=60.1
Q ss_pred EeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042009 18 ISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSR 97 (262)
Q Consensus 18 ~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 97 (262)
+.-+.|.|+. -+|+ .|+++++.+||.++. . +...+|+.=
T Consensus 233 v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d---~-----------------------------------~~~~~l~~~ 271 (352)
T 1fp2_A 233 LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD---K-----------------------------------DCLRILKKC 271 (352)
T ss_dssp EEEEECCTTT-CCCC--CSEEEEESCGGGSCH---H-----------------------------------HHHHHHHHH
T ss_pred cEEEeccccC-CCCC--ccEEEeehhhccCCH---H-----------------------------------HHHHHHHHH
Confidence 4456688887 4564 899999999995322 0 011223333
Q ss_pred HHhhcc---CceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCce
Q 042009 98 AAEMVA---GGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSF 174 (262)
Q Consensus 98 a~EL~~---GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF 174 (262)
.+-|+| ||++++.-...++... .. .... ...+.++.... + +-..++.+|+++.+++.| |
T Consensus 272 ~~~L~p~~~gG~l~i~e~~~~~~~~-~~---~~~~--~~~~~d~~~~~---------~--~g~~~t~~e~~~ll~~aG-f 333 (352)
T 1fp2_A 272 KEAVTNDGKRGKVTIIDMVIDKKKD-EN---QVTQ--IKLLMDVNMAC---------L--NGKERNEEEWKKLFIEAG-F 333 (352)
T ss_dssp HHHHSGGGCCCEEEEEECEECTTTS-CH---HHHH--HHHHHHHHGGG---------G--TCCCEEHHHHHHHHHHTT-C
T ss_pred HHhCCCCCCCcEEEEEEeecCCCCC-cc---chhh--hHhhccHHHHh---------c--cCCCCCHHHHHHHHHHCC-C
Confidence 567899 9999988665543221 10 0011 11222221100 1 123468999999999999 8
Q ss_pred EEEEEEe
Q 042009 175 IIDRLGH 181 (262)
Q Consensus 175 ~I~~le~ 181 (262)
++.+...
T Consensus 334 ~~~~~~~ 340 (352)
T 1fp2_A 334 QHYKISP 340 (352)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 7665543
No 98
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=76.27 E-value=2 Score=34.76 Aligned_cols=16 Identities=13% Similarity=0.358 Sum_probs=12.6
Q ss_pred HHhhccCceEEEEecc
Q 042009 98 AAEMVAGGRMVLSLMG 113 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g 113 (262)
.+-|+|||++++....
T Consensus 146 ~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 146 DSHLNEDGQVIFSGID 161 (205)
T ss_dssp GGGEEEEEEEEEEEEE
T ss_pred HHhcCCCCEEEEEecC
Confidence 5679999999996443
No 99
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=76.12 E-value=3.9 Score=33.54 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=19.3
Q ss_pred ccCCHHHHHHHHhcCCceEEEEEE
Q 042009 157 YAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 157 y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
...+.+|+++.+++.| |++.++.
T Consensus 199 ~~~~~~~l~~~l~~aG-f~~~~~~ 221 (243)
T 3d2l_A 199 RTYPPEQYITWLREAG-FRVCAVT 221 (243)
T ss_dssp ECCCHHHHHHHHHHTT-EEEEEEE
T ss_pred ecCCHHHHHHHHHHCC-CeEEEEe
Confidence 4579999999999999 8876664
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=76.00 E-value=2.3 Score=37.04 Aligned_cols=48 Identities=15% Similarity=0.146 Sum_probs=32.9
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
++.+++|+++|...+||+.- ..-..++..+|+.=.+-|+|||+|++
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl----------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil 218 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL----------------------------------NWGDEGLKRMFRRIYRHLRPGGILVL 218 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH----------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCcCEEEEChHHHHhhh----------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 56788888888888888521 00123445556655778999999998
Q ss_pred Ee
Q 042009 110 SL 111 (262)
Q Consensus 110 ~~ 111 (262)
..
T Consensus 219 ~~ 220 (292)
T 3g07_A 219 EP 220 (292)
T ss_dssp EC
T ss_pred ec
Confidence 63
No 101
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=75.86 E-value=3.8 Score=33.55 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=18.9
Q ss_pred cccCCHHHHHHHHhcCCceEEEEE
Q 042009 156 YYAPCPEELKMAIQKEGSFIIDRL 179 (262)
Q Consensus 156 ~y~ps~~Ev~~~ie~~gsF~I~~l 179 (262)
.+..+++|++..+++.| |+|..+
T Consensus 202 ~~~~t~~~~~~ll~~aG-F~v~~~ 224 (239)
T 3bxo_A 202 ITLFHQAEYEAAFTAAG-LRVEYL 224 (239)
T ss_dssp EECCCHHHHHHHHHHTT-EEEEEE
T ss_pred eeecCHHHHHHHHHHCC-CEEEEe
Confidence 35678999999999999 877655
No 102
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=74.18 E-value=4.5 Score=31.60 Aligned_cols=52 Identities=6% Similarity=0.169 Sum_probs=35.0
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+.. .+|+++.|+++++..+||- ..++..+|+.=.+-|+
T Consensus 109 ~d~~~-~~~~~~~D~v~~~~~~~~~---------------------------------------~~~~~~~l~~~~~~L~ 148 (194)
T 1dus_A 109 SDLYE-NVKDRKYNKIITNPPIRAG---------------------------------------KEVLHRIIEEGKELLK 148 (194)
T ss_dssp CSTTT-TCTTSCEEEEEECCCSTTC---------------------------------------HHHHHHHHHHHHHHEE
T ss_pred Cchhc-ccccCCceEEEECCCcccc---------------------------------------hhHHHHHHHHHHHHcC
Confidence 44444 4567889999987766650 1123345555577799
Q ss_pred cCceEEEEeccc
Q 042009 103 AGGRMVLSLMGR 114 (262)
Q Consensus 103 ~GG~mvl~~~g~ 114 (262)
|||++++.....
T Consensus 149 ~gG~l~~~~~~~ 160 (194)
T 1dus_A 149 DNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEEEST
T ss_pred CCCEEEEEECCC
Confidence 999999997754
No 103
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=70.90 E-value=8.2 Score=33.71 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhhccCceEEEEec
Q 042009 87 QNNFLIFLKSRAAEMVAGGRMVLSLM 112 (262)
Q Consensus 87 ~~D~~~FL~~Ra~EL~~GG~mvl~~~ 112 (262)
-.++..+++.=.+=|+|||.+++.+.
T Consensus 73 l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 73 LDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 33444555544566899999998875
No 104
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=68.65 E-value=2.6 Score=33.82 Aligned_cols=18 Identities=17% Similarity=0.420 Sum_probs=15.9
Q ss_pred CCCCccceEEcccccccc
Q 042009 30 FPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWL 47 (262)
+|++++|+++|..++||.
T Consensus 102 ~~~~~fD~v~~~~~~~~~ 119 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCI 119 (201)
T ss_dssp HTTCCEEEEEECCCCCCC
T ss_pred cCCCcccEEEeCCCcCCC
Confidence 688899999999998884
No 105
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=67.82 E-value=16 Score=28.67 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=17.2
Q ss_pred HHHHHHHHHhhccCceEEEEecc
Q 042009 91 LIFLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 91 ~~FL~~Ra~EL~~GG~mvl~~~g 113 (262)
..+|+.=.+=|+|||++++....
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEEecC
Confidence 45555557779999999998653
No 106
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=67.61 E-value=2.8 Score=37.34 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=17.9
Q ss_pred cCCHHHHHHHHhcCCceEEEEEEeE
Q 042009 158 APCPEELKMAIQKEGSFIIDRLGHF 182 (262)
Q Consensus 158 ~ps~~Ev~~~ie~~gsF~I~~le~~ 182 (262)
..+.+++.+.++..| |.+..+..-
T Consensus 209 ~~~~~~v~~~~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 209 EKVLETVTAFAVDYG-FSVKGLDFS 232 (291)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEEEC
T ss_pred HHHHHHHHHHHHHCC-CEEEEEEEC
Confidence 347788888888888 887776643
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=66.65 E-value=3.7 Score=33.14 Aligned_cols=27 Identities=4% Similarity=-0.015 Sum_probs=20.7
Q ss_pred ccCccccccCCCCccceEEcccccccc
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+-+....-+.+.++.|++++..++||+
T Consensus 130 ~~~d~~~~~~~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 130 RHGDGWQGWQARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp EESCGGGCCGGGCCEEEEEESSBCSSC
T ss_pred EECCcccCCccCCCccEEEEccchhhh
Confidence 345666666678899999999888774
No 108
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=64.39 E-value=9.3 Score=30.84 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=34.8
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
+.+.+--+|+++.|+++++.++|.... .|...+|+.=.+-|+
T Consensus 92 ~d~~~~~~~~~~~D~v~~~~~~~~~~~--------------------------------------~~~~~~l~~~~~~L~ 133 (227)
T 1ve3_A 92 GDARKLSFEDKTFDYVIFIDSIVHFEP--------------------------------------LELNQVFKEVRRVLK 133 (227)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGGGCCH--------------------------------------HHHHHHHHHHHHHEE
T ss_pred CchhcCCCCCCcEEEEEEcCchHhCCH--------------------------------------HHHHHHHHHHHHHcC
Confidence 445443478889999999888544211 112334444467799
Q ss_pred cCceEEEEecc
Q 042009 103 AGGRMVLSLMG 113 (262)
Q Consensus 103 ~GG~mvl~~~g 113 (262)
|||++++....
T Consensus 134 ~gG~l~~~~~~ 144 (227)
T 1ve3_A 134 PSGKFIMYFTD 144 (227)
T ss_dssp EEEEEEEEEEC
T ss_pred CCcEEEEEecC
Confidence 99999998765
No 109
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=63.26 E-value=1.9 Score=36.51 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=38.5
Q ss_pred HHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHH----HHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcC
Q 042009 96 SRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLA----QALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKE 171 (262)
Q Consensus 96 ~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~----~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~ 171 (262)
.=.+=|+|||++++...+... ...+++. ..+......|...... ....++.++.+++|+++. .
T Consensus 137 ~~~~~LkpgG~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---a 203 (260)
T 2avn_A 137 EIRRVLVPDGLLIATVDNFYT---------FLQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---E 203 (260)
T ss_dssp HHHHHEEEEEEEEEEEEBHHH---------HHHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---T
T ss_pred HHHHHcCCCeEEEEEeCChHH---------HHHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---c
Confidence 336679999999999876421 0001000 1122223344332110 011123346788888877 5
Q ss_pred CceEEEEEEeE
Q 042009 172 GSFIIDRLGHF 182 (262)
Q Consensus 172 gsF~I~~le~~ 182 (262)
| |++.+....
T Consensus 204 G-f~~~~~~~~ 213 (260)
T 2avn_A 204 G-FETVDIRGI 213 (260)
T ss_dssp T-EEEEEEEEE
T ss_pred C-ceEEEEECC
Confidence 6 988777655
No 110
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=62.31 E-value=5.5 Score=35.74 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=35.2
Q ss_pred cCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042009 22 AGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 22 pgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 101 (262)
-|+..+--+|.+++|+++|....+++... .++..+|+.+.+=|
T Consensus 121 ~~d~~~~~~~~~~fD~Iis~~~~~~l~~~-------------------------------------~~~~~~l~~~~r~L 163 (349)
T 3q7e_A 121 KGKVEEVELPVEKVDIIISEWMGYCLFYE-------------------------------------SMLNTVLHARDKWL 163 (349)
T ss_dssp ESCTTTCCCSSSCEEEEEECCCBBTBTBT-------------------------------------CCHHHHHHHHHHHE
T ss_pred ECcHHHccCCCCceEEEEEccccccccCc-------------------------------------hhHHHHHHHHHHhC
Confidence 34555546888999999997655554321 12235677888999
Q ss_pred ccCceEEE
Q 042009 102 VAGGRMVL 109 (262)
Q Consensus 102 ~~GG~mvl 109 (262)
+|||+|+.
T Consensus 164 kpgG~li~ 171 (349)
T 3q7e_A 164 APDGLIFP 171 (349)
T ss_dssp EEEEEEES
T ss_pred CCCCEEcc
Confidence 99999973
No 111
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=61.23 E-value=16 Score=29.87 Aligned_cols=20 Identities=20% Similarity=0.198 Sum_probs=15.6
Q ss_pred ccCCCCccceEEcccccccc
Q 042009 28 RLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 28 rlfP~~Svh~~~Ss~alHWL 47 (262)
..||++++|.++..++..|.
T Consensus 102 ~~~~~~~~d~v~~~~~~p~~ 121 (213)
T 2fca_A 102 DVFEPGEVKRVYLNFSDPWP 121 (213)
T ss_dssp HHCCTTSCCEEEEESCCCCC
T ss_pred hhcCcCCcCEEEEECCCCCc
Confidence 45899999999887766663
No 112
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=61.21 E-value=8.9 Score=33.34 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=14.2
Q ss_pred CCccceEEcccccccc
Q 042009 32 DKSLHFVHSSSSLHWL 47 (262)
Q Consensus 32 ~~Svh~~~Ss~alHWL 47 (262)
+++.|+++|+.++||+
T Consensus 108 ~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRF 123 (261)
T ss_dssp TTCCSEEEEESCGGGS
T ss_pred CCCccEEEEhhhhHhC
Confidence 5789999999999986
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=60.95 E-value=12 Score=30.77 Aligned_cols=11 Identities=0% Similarity=0.057 Sum_probs=9.7
Q ss_pred HHhhccCceEE
Q 042009 98 AAEMVAGGRMV 108 (262)
Q Consensus 98 a~EL~~GG~mv 108 (262)
.+-|+|||+++
T Consensus 129 ~~~LkpgG~l~ 139 (226)
T 3m33_A 129 PELAAPDAHFL 139 (226)
T ss_dssp HHHEEEEEEEE
T ss_pred HHHcCCCcEEE
Confidence 56799999999
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.04 E-value=13 Score=33.98 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=40.0
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+-+....-+.++++.|+++|+..+||...... .+...||+.=.+=
T Consensus 285 ~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~-----------------------------------~~~~~~l~~~~~~ 329 (381)
T 3dmg_A 285 LHSDVDEALTEEARFDIIVTNPPFHVGGAVIL-----------------------------------DVAQAFVNVAAAR 329 (381)
T ss_dssp EECSTTTTSCTTCCEEEEEECCCCCTTCSSCC-----------------------------------HHHHHHHHHHHHH
T ss_pred EEcchhhccccCCCeEEEEECCchhhcccccH-----------------------------------HHHHHHHHHHHHh
Confidence 34666766777799999999999998433211 1233455555778
Q ss_pred hccCceEEEEec
Q 042009 101 MVAGGRMVLSLM 112 (262)
Q Consensus 101 L~~GG~mvl~~~ 112 (262)
|+|||+++++..
T Consensus 330 LkpGG~l~iv~n 341 (381)
T 3dmg_A 330 LRPGGVFFLVSN 341 (381)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCcCcEEEEEEc
Confidence 999999999854
No 115
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=57.55 E-value=9 Score=31.84 Aligned_cols=20 Identities=30% Similarity=0.581 Sum_probs=17.3
Q ss_pred cccCCCCccceEEccccccc
Q 042009 27 DRLFPDKSLHFVHSSSSLHW 46 (262)
Q Consensus 27 ~rlfP~~Svh~~~Ss~alHW 46 (262)
...+|++|+|.+++.+...|
T Consensus 98 ~~~~~~~~~d~v~~~~~~p~ 117 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPDPW 117 (218)
T ss_dssp HHHSCTTCEEEEEEESCCCC
T ss_pred HHHcCCCChheEEEeCCCCc
Confidence 44689999999999988888
No 116
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=54.96 E-value=8.1 Score=32.64 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=40.9
Q ss_pred HHHHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcC
Q 042009 92 IFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKE 171 (262)
Q Consensus 92 ~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~ 171 (262)
.+|+.=.+=|+|||++++.+ .+. ++ ..+..+-..|++..... +..+.+|+.+.+++.
T Consensus 118 ~~l~~i~rvLkpgG~lv~~~--~p~-----------~e---~~~~~~~~~G~~~d~~~-------~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 118 LILPPLYEILEKNGEVAALI--KPQ-----------FE---AGREQVGKNGIIRDPKV-------HQMTIEKVLKTATQL 174 (232)
T ss_dssp GTHHHHHHHSCTTCEEEEEE--CHH-----------HH---SCHHHHC-CCCCCCHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEEE--Ccc-----------cc---cCHHHhCcCCeecCcch-------hHHHHHHHHHHHHHC
Confidence 34555567899999999965 110 11 11222223455433221 223889999999999
Q ss_pred CceEEEEEEeE
Q 042009 172 GSFIIDRLGHF 182 (262)
Q Consensus 172 gsF~I~~le~~ 182 (262)
| |++..++..
T Consensus 175 G-f~v~~~~~~ 184 (232)
T 3opn_A 175 G-FSVKGLTFS 184 (232)
T ss_dssp T-EEEEEEEEC
T ss_pred C-CEEEEEEEc
Confidence 8 998887754
No 117
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=54.82 E-value=6.2 Score=35.15 Aligned_cols=25 Identities=28% Similarity=0.433 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhhccCceEEEEecc
Q 042009 89 NFLIFLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 89 D~~~FL~~Ra~EL~~GG~mvl~~~g 113 (262)
++...|+.=.+=|+|||.+++.+.-
T Consensus 62 ~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 62 WFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHCcCCcEEEEEECC
Confidence 3344444334558999999998753
No 118
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=52.76 E-value=8.1 Score=31.56 Aligned_cols=25 Identities=16% Similarity=-0.104 Sum_probs=17.8
Q ss_pred CccccccCCCCccceEEcccccccc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+.+...+.+.++.|++++..++|++
T Consensus 123 ~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 123 GDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCcccccccCCCccEEEECCcHHHH
Confidence 4444434457899999999888764
No 119
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=52.45 E-value=5.9 Score=30.71 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=13.4
Q ss_pred cCCC--CccceEEccccccc
Q 042009 29 LFPD--KSLHFVHSSSSLHW 46 (262)
Q Consensus 29 lfP~--~Svh~~~Ss~alHW 46 (262)
.+|. +++|+++++.++||
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC
T ss_pred hhhccCCCCCEEEECCcccH
Confidence 4455 88999998888877
No 120
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=52.36 E-value=11 Score=32.87 Aligned_cols=19 Identities=0% Similarity=0.228 Sum_probs=15.2
Q ss_pred CC-CCccceEEccccccccc
Q 042009 30 FP-DKSLHFVHSSSSLHWLS 48 (262)
Q Consensus 30 fP-~~Svh~~~Ss~alHWLS 48 (262)
+| .+++|+++|.+.|+|+.
T Consensus 208 ~~~~~~fDlI~crnvliyf~ 227 (274)
T 1af7_A 208 YNVPGPFDAIFCRNVMIYFD 227 (274)
T ss_dssp CCCCCCEEEEEECSSGGGSC
T ss_pred CCcCCCeeEEEECCchHhCC
Confidence 44 57899999988888864
No 121
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=51.73 E-value=8.8 Score=34.77 Aligned_cols=51 Identities=22% Similarity=0.174 Sum_probs=34.7
Q ss_pred CccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV 102 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 102 (262)
|...+-.+| +++|+++|....|++... .++..+|+.+.+=|+
T Consensus 119 ~d~~~~~~~-~~~D~Iv~~~~~~~l~~e-------------------------------------~~~~~~l~~~~~~Lk 160 (376)
T 3r0q_C 119 GSVEDISLP-EKVDVIISEWMGYFLLRE-------------------------------------SMFDSVISARDRWLK 160 (376)
T ss_dssp SCGGGCCCS-SCEEEEEECCCBTTBTTT-------------------------------------CTHHHHHHHHHHHEE
T ss_pred CchhhcCcC-CcceEEEEcChhhcccch-------------------------------------HHHHHHHHHHHhhCC
Confidence 444444455 899999996656665321 123456788889999
Q ss_pred cCceEEEEe
Q 042009 103 AGGRMVLSL 111 (262)
Q Consensus 103 ~GG~mvl~~ 111 (262)
|||+|++.-
T Consensus 161 pgG~li~~~ 169 (376)
T 3r0q_C 161 PTGVMYPSH 169 (376)
T ss_dssp EEEEEESSE
T ss_pred CCeEEEEec
Confidence 999997653
No 122
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=50.73 E-value=15 Score=29.69 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCceEEEEEEeEe
Q 042009 161 PEELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 161 ~~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
.+++...+++.| |+|...+.+.
T Consensus 164 ~~~l~~~l~~aG-f~i~~~~~~~ 185 (218)
T 3mq2_A 164 DEWLAPRYAEAG-WKLADCRYLE 185 (218)
T ss_dssp HHHHHHHHHHTT-EEEEEEEEEC
T ss_pred HHHHHHHHHHcC-CCceeeeccc
Confidence 455888888888 9999988774
No 123
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=50.61 E-value=28 Score=28.18 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=32.2
Q ss_pred CCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 042009 30 FPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVL 109 (262)
Q Consensus 30 fP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl 109 (262)
+|++++|++++.-..||..... +.... .+|..+. . . ..+...+|+.=.+=|+|||++++
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~--~~~~~--~~~~~~~-----~-~-----------~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGR--VLTER--EAIGGGK-----Y-G-----------EEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp TCCSCEEEEEECCCCC-------------------CCS-----S-S-----------CHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCcccc--ccChh--hhhccCc-----c-c-----------hHHHHHHHHHHHHHhCCCeEEEE
Confidence 5679999999998887765511 11100 0111110 0 0 11224456655677999999999
Q ss_pred Eecc
Q 042009 110 SLMG 113 (262)
Q Consensus 110 ~~~g 113 (262)
.+..
T Consensus 178 ~~~~ 181 (230)
T 3evz_A 178 YLPD 181 (230)
T ss_dssp EEES
T ss_pred Eecc
Confidence 8653
No 124
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=49.26 E-value=10 Score=30.60 Aligned_cols=25 Identities=8% Similarity=-0.106 Sum_probs=17.1
Q ss_pred CccccccCCCCccceEEcccccccc
Q 042009 23 GSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 23 gSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+.....+.+.++.|++++..++|++
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 135 GDGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCcccCCCCCCCeeEEEECCchHHH
Confidence 4443333337789999999988864
No 125
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=46.25 E-value=18 Score=30.33 Aligned_cols=22 Identities=9% Similarity=-0.061 Sum_probs=14.7
Q ss_pred ccccCCCCccceEEcccccccc
Q 042009 26 YDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 26 Y~rlfP~~Svh~~~Ss~alHWL 47 (262)
....||++++|.++..+.-.|.
T Consensus 115 l~~~~~~~~~D~v~~~~~dp~~ 136 (235)
T 3ckk_A 115 LPNFFYKGQLTKMFFLFPDPHF 136 (235)
T ss_dssp HHHHCCTTCEEEEEEESCC---
T ss_pred hhhhCCCcCeeEEEEeCCCchh
Confidence 3455889999999887766663
No 126
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=44.43 E-value=19 Score=32.69 Aligned_cols=28 Identities=7% Similarity=-0.012 Sum_probs=17.8
Q ss_pred ccCccccccCCCCccceEEcccccccccC
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQ 49 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~ 49 (262)
+-+.++. .+|++++|+++|.-.+|+...
T Consensus 280 ~~~D~~~-~~~~~~fD~Ii~nppfh~~~~ 307 (375)
T 4dcm_A 280 MINNALS-GVEPFRFNAVLCNPPFHQQHA 307 (375)
T ss_dssp EECSTTT-TCCTTCEEEEEECCCC-----
T ss_pred Eechhhc-cCCCCCeeEEEECCCcccCcc
Confidence 3455555 468899999999988887443
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=44.40 E-value=21 Score=31.62 Aligned_cols=55 Identities=11% Similarity=0.161 Sum_probs=38.5
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAE 100 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 100 (262)
+.+.+.. ++++++|+++|+..+||.-. ....+...+|+.=.+=
T Consensus 250 ~~~d~~~--~~~~~fD~Iv~~~~~~~g~~-----------------------------------~~~~~~~~~l~~~~~~ 292 (343)
T 2pjd_A 250 FASNVFS--EVKGRFDMIISNPPFHDGMQ-----------------------------------TSLDAAQTLIRGAVRH 292 (343)
T ss_dssp EECSTTT--TCCSCEEEEEECCCCCSSSH-----------------------------------HHHHHHHHHHHHHGGG
T ss_pred EEccccc--cccCCeeEEEECCCcccCcc-----------------------------------CCHHHHHHHHHHHHHh
Confidence 3455554 34789999999998887211 0123456677777889
Q ss_pred hccCceEEEEec
Q 042009 101 MVAGGRMVLSLM 112 (262)
Q Consensus 101 L~~GG~mvl~~~ 112 (262)
|+|||+++++..
T Consensus 293 LkpgG~l~i~~~ 304 (343)
T 2pjd_A 293 LNSGGELRIVAN 304 (343)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCCcEEEEEEc
Confidence 999999999754
No 128
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=42.73 E-value=41 Score=26.70 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=13.7
Q ss_pred HHHHHHHHhhccCceEEEEec
Q 042009 92 IFLKSRAAEMVAGGRMVLSLM 112 (262)
Q Consensus 92 ~FL~~Ra~EL~~GG~mvl~~~ 112 (262)
.+|+.=.+-|+|||++++...
T Consensus 123 ~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 123 EIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp HHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEec
Confidence 344444566888888887654
No 129
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=42.33 E-value=12 Score=31.39 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcC
Q 042009 127 QWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKE 171 (262)
Q Consensus 127 ~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~ 171 (262)
+|+-|-+-++.|+++|.|+++.+ ++-.+..+++|+-+.++++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~---~~i~~~d~~~e~~~~l~~~ 199 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAM---DSLVVVDNVEAALEACAPE 199 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHH---HTSEEESSHHHHHHHHSCC
T ss_pred cchHHHHHHHHHHHCCCCCHHHC---CeEEEeCCHHHHHHHHhcC
Confidence 56777777789999999999974 4557789999999888753
No 130
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=41.48 E-value=20 Score=29.41 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=16.2
Q ss_pred cCccccc--cCCCCccceEEc-cccc
Q 042009 22 AGSFYDR--LFPDKSLHFVHS-SSSL 44 (262)
Q Consensus 22 pgSFY~r--lfP~~Svh~~~S-s~al 44 (262)
-|...+- -||++++|++++ .+++
T Consensus 114 ~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 114 KGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp ESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred ecCHHHhhcccCCCceEEEEECCccc
Confidence 3455443 488999999999 6655
No 131
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=40.69 E-value=20 Score=31.58 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhccCceEE
Q 042009 91 LIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 91 ~~FL~~Ra~EL~~GG~mv 108 (262)
..+|+.+.+=|+|||+++
T Consensus 125 ~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 125 DTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp HHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHhhcCCCeEEE
Confidence 356777889999999997
No 132
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=40.38 E-value=21 Score=30.13 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhc
Q 042009 126 YQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK 170 (262)
Q Consensus 126 ~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~ 170 (262)
.+|+-|-+-++.|+.+|.|+++.++ +-.+..+++|+-+.|++
T Consensus 149 g~w~~l~~~l~~~~~~Gfi~~~~~~---~~~~~d~~ee~~~~l~~ 190 (215)
T 2a33_A 149 GYYNSLLSFIDKAVEEGFISPTARE---IIVSAPTAKELVKKLEE 190 (215)
T ss_dssp GTTHHHHHHHHHHHHHTSSCHHHHT---TEEEESSHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHcCCCCHHHCC---eEEEeCCHHHHHHHHHH
Confidence 3577777778999999999999765 45789999999999975
No 133
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=40.09 E-value=33 Score=28.96 Aligned_cols=42 Identities=26% Similarity=0.284 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhc
Q 042009 126 YQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK 170 (262)
Q Consensus 126 ~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~ 170 (262)
.+|+-|-.-++.|+++|.|+++.++. -.+..+++|+-+.+++
T Consensus 171 ~~w~~l~~~l~~~~~~Gfi~~~~~~~---~~~~~~~~e~~~~l~~ 212 (217)
T 1wek_A 171 GYWEGLVRWLAFLRDQKAVGPEDLQL---FRLTDEPEEVVQALKA 212 (217)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTGGGG---SEEESCHHHHHHHHHC
T ss_pred ccchhHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHHHH
Confidence 36877766679999999999998664 4789999999988874
No 134
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=39.32 E-value=26 Score=31.08 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhccCceEE
Q 042009 89 NFLIFLKSRAAEMVAGGRMV 108 (262)
Q Consensus 89 D~~~FL~~Ra~EL~~GG~mv 108 (262)
++..+|+.+.+=|+|||+++
T Consensus 149 ~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 149 MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp HHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHhhcCCCcEEE
Confidence 34467888899999999998
No 135
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=39.13 E-value=17 Score=30.27 Aligned_cols=21 Identities=29% Similarity=0.591 Sum_probs=18.0
Q ss_pred HHHHHHHhcCCceEEEEEEeEe
Q 042009 162 EELKMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 162 ~Ev~~~ie~~gsF~I~~le~~~ 183 (262)
+|+.+.+++.| |+|...+.+.
T Consensus 166 ~el~~~l~~aG-f~v~~~~~~~ 186 (225)
T 3p2e_A 166 EQYKAELSNSG-FRIDDVKELD 186 (225)
T ss_dssp HHHHHHHHHHT-CEEEEEEEEC
T ss_pred HHHHHHHHHcC-CCeeeeeecC
Confidence 46999999888 9999998875
No 136
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=37.63 E-value=40 Score=29.55 Aligned_cols=21 Identities=5% Similarity=0.113 Sum_probs=15.5
Q ss_pred HHHHHHHhhccCceEEEEecc
Q 042009 93 FLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 93 FL~~Ra~EL~~GG~mvl~~~g 113 (262)
.|+.-.+=|+|||.+++.+..
T Consensus 173 ~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp HHHHHHHHCCTTCEEEEEESC
T ss_pred HHHHHHHHhCCCCEEEEEeCC
Confidence 455445789999999987653
No 137
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=37.30 E-value=13 Score=27.09 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhccCChh----hhcccccCcccCCHHHHHHHHhc
Q 042009 129 ELLAQALMSLVTERLIEEE----KLDSFNAPYYAPCPEELKMAIQK 170 (262)
Q Consensus 129 ~~l~~al~dmv~eGli~~e----~~dsfn~P~y~ps~~Ev~~~ie~ 170 (262)
..+.++|..|.++|+|... .-....++.|..+.+++...++.
T Consensus 48 ~tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 48 NDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 4689999999999999876 44444455557888888777664
No 138
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=36.64 E-value=22 Score=29.03 Aligned_cols=16 Identities=19% Similarity=0.569 Sum_probs=13.1
Q ss_pred HHhhccCceEEEEecc
Q 042009 98 AAEMVAGGRMVLSLMG 113 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g 113 (262)
.+-|+|||+|++.+..
T Consensus 181 ~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 181 INQLASGGRLIVPVGP 196 (227)
T ss_dssp HHTEEEEEEEEEEESC
T ss_pred HHHhcCCCEEEEEEec
Confidence 4558999999999864
No 139
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=36.03 E-value=28 Score=26.61 Aligned_cols=75 Identities=23% Similarity=0.281 Sum_probs=47.7
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccc
Q 042009 74 SPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFN 153 (262)
Q Consensus 74 s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn 153 (262)
.|..+.+.|++||++||...|+-|-.+=+. . .+. |-..+|..-.--.||
T Consensus 11 n~~k~i~~fS~eF~~~Fl~lLr~~~g~krV-----~--------------aN~------------vYnEyI~dk~HiHMN 59 (111)
T 2v1n_A 11 NPQQFMDYFSEEFRNDFLELLRRRFGTKRV-----H--------------NNI------------VYNEYISHREHIHMN 59 (111)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHTSSCEE-----E--------------HHH------------HHHHHTTSSCCCCGG
T ss_pred CHhhHHHHHHHHHHHHHHHHHHHhcCCcEe-----e--------------hhH------------HHHHHhccccccccc
Confidence 456678899999999999999987532110 0 111 112344433333444
Q ss_pred cCcccCCHHHHHHHHhcCCceEEEEEE
Q 042009 154 APYYAPCPEELKMAIQKEGSFIIDRLG 180 (262)
Q Consensus 154 ~P~y~ps~~Ev~~~ie~~gsF~I~~le 180 (262)
- .-..|.-|+-.-+-.+|-.+|+..+
T Consensus 60 a-T~W~tLT~Fvk~Lgr~G~c~V~ete 85 (111)
T 2v1n_A 60 A-TQWETLTDFTKWLGREGLCKVDETP 85 (111)
T ss_dssp G-SSCSSHHHHHHHHTTTTSEEEEEET
T ss_pred c-cccccHHHHHHHhccCCeEEEecCC
Confidence 3 4466888888888888877777544
No 140
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=35.99 E-value=24 Score=29.13 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhc
Q 042009 126 YQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK 170 (262)
Q Consensus 126 ~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~ 170 (262)
.+|+-+-+-++.|+++|.|+++.++. -.+..+++|+.+.+++
T Consensus 137 g~~~~l~~~l~~~~~~Gfi~~~~~~~---~~~~~~~~e~~~~l~~ 178 (191)
T 1t35_A 137 GYFEPMMKMVKYSIQEGFSNESHLKL---IHSSSRPDELIEQMQN 178 (191)
T ss_dssp GTTHHHHHHHHHHHHTTSSCTTHHHH---EEEESSHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHCCCCCHHHcCe---EEEeCCHHHHHHHHHH
Confidence 46777777778999999999998764 5778999999999875
No 141
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=35.57 E-value=24 Score=29.81 Aligned_cols=24 Identities=29% Similarity=0.444 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhccCceEEEEec
Q 042009 89 NFLIFLKSRAAEMVAGGRMVLSLM 112 (262)
Q Consensus 89 D~~~FL~~Ra~EL~~GG~mvl~~~ 112 (262)
++..||+.=++=|+|||++++...
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 466778877888999999999764
No 142
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=34.85 E-value=69 Score=26.61 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhccCceEEEEe
Q 042009 87 QNNFLIFLKSRAAEMVAGGRMVLSL 111 (262)
Q Consensus 87 ~~D~~~FL~~Ra~EL~~GG~mvl~~ 111 (262)
..++..||+.=++=|+|||+++++.
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 152 MCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3567788888888899999999965
No 143
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=34.39 E-value=21 Score=31.17 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=19.2
Q ss_pred ccCccccccCCCCccceEEcccccccc
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWL 47 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWL 47 (262)
+-+.+..-+.+.++.|++++...+|++
T Consensus 131 ~~~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 131 VCGDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp EESCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred EECChhhccccCCCeEEEEEcCCHHHH
Confidence 335555545567889999999888764
No 144
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=34.23 E-value=21 Score=29.32 Aligned_cols=17 Identities=12% Similarity=0.454 Sum_probs=13.5
Q ss_pred HHhhccCceEEEEeccc
Q 042009 98 AAEMVAGGRMVLSLMGR 114 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g~ 114 (262)
.+-|+|||+|++.+...
T Consensus 176 ~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 176 IEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp HHTEEEEEEEEEEECSS
T ss_pred HHhcCCCcEEEEEEecC
Confidence 34699999999988643
No 145
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=32.80 E-value=82 Score=27.12 Aligned_cols=21 Identities=5% Similarity=0.055 Sum_probs=15.8
Q ss_pred HHHHHHHhhccCc--eEEEEecc
Q 042009 93 FLKSRAAEMVAGG--RMVLSLMG 113 (262)
Q Consensus 93 FL~~Ra~EL~~GG--~mvl~~~g 113 (262)
.|+.-.+=|+||| .+++....
T Consensus 173 ~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 173 VLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHHHHHHSTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCcEEEEEeCC
Confidence 4555556799999 99987665
No 146
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=32.30 E-value=19 Score=25.37 Aligned_cols=21 Identities=33% Similarity=0.729 Sum_probs=17.2
Q ss_pred HHHHHHHH---HHHHhhccCceEE
Q 042009 88 NNFLIFLK---SRAAEMVAGGRMV 108 (262)
Q Consensus 88 ~D~~~FL~---~Ra~EL~~GG~mv 108 (262)
.++..|.+ +|-.||+.||+++
T Consensus 34 ~e~~~f~~AaDHRrAEl~~~gkLy 57 (71)
T 2jqt_A 34 QELINMYRAADHRRAELVSGGRLF 57 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCccc
Confidence 36777777 5999999999985
No 147
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=32.23 E-value=25 Score=26.72 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHH-HHHHhcCCceEEEEEEeEe
Q 042009 128 WELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEEL-KMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 128 ~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev-~~~ie~~gsF~I~~le~~~ 183 (262)
=..|.++|++|+.+|.|+++..... +-.|-.+..|. ..-+...-+|+ -++.++.
T Consensus 11 G~aL~dtLdEli~~~~Isp~la~kV-L~~FDksi~~aL~~~vksk~sfK-G~L~tYr 65 (108)
T 1nvp_D 11 GNSLQESLDELIQSQQITPQLALQV-LLQFDKAINAALAQRVRNRVNFR-GSLNTYR 65 (108)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHH-HHHHHHHHHHHHHHTCCCEEEEE-EEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHH-HHHHHHHHHHHHHHHhccCCeEe-eccCCcc
Confidence 3579999999999999999864433 33334444442 22233233466 5666554
No 148
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.20 E-value=33 Score=28.94 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhc
Q 042009 126 YQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK 170 (262)
Q Consensus 126 ~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~ 170 (262)
.+|+-|-+-++.|+++|.|+++.++ +-.+..+++|+-+.|++
T Consensus 145 gfw~~l~~~l~~~~~~Gfi~~~~~~---~~~~~d~~ee~~~~l~~ 186 (216)
T 1ydh_A 145 GYYNNLLALFDTGVEEGFIKPGARN---IVVSAPTAKELMEKMEE 186 (216)
T ss_dssp GTTHHHHHHHHHHHHTTSSCHHHHT---TEEEESSHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHCCCCChHHcC---eEEEeCCHHHHHHHHHH
Confidence 3577777777899999999999765 46789999999999985
No 149
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=31.91 E-value=20 Score=29.83 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhhccCceEEEE
Q 042009 88 NNFLIFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 88 ~D~~~FL~~Ra~EL~~GG~mvl~ 110 (262)
.|...||+.=++=|+|||+|++.
T Consensus 147 ~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 147 HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cchhhhhhhhhheeCCCCEEEEE
Confidence 45666777668889999999764
No 150
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=31.70 E-value=27 Score=22.69 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=21.9
Q ss_pred CceEEeeccCccccccCCCCccceE
Q 042009 14 GRCYISGVAGSFYDRLFPDKSLHFV 38 (262)
Q Consensus 14 ~~~f~~~vpgSFY~rlfP~~Svh~~ 38 (262)
.++..-.+.+-||=|++|+++|+=.
T Consensus 6 ~~~~~~~~~~Gf~LqI~PdG~V~GT 30 (48)
T 3ol0_A 6 HPVLLKSTETGQYLRINPDGTVDGT 30 (48)
T ss_dssp CCEEEEETTTCCEEEECTTSBEEEE
T ss_pred CcchheeccCcEEeEECCCCCCccc
Confidence 4678888999999999999999865
No 151
>2qjy_B Cytochrome C1; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_B* 2qjp_B* 2qjk_B*
Probab=31.67 E-value=41 Score=29.63 Aligned_cols=63 Identities=19% Similarity=0.391 Sum_probs=35.8
Q ss_pred ccCccccccCCCCcc-ceEE-----cccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHH
Q 042009 21 VAGSFYDRLFPDKSL-HFVH-----SSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFL 94 (262)
Q Consensus 21 vpgSFY~rlfP~~Sv-h~~~-----Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 94 (262)
.+|-+|+.+||.-.. |... --..=+|++ +|++|.| |.|-+...+|++ .+|..+|+.+||
T Consensus 151 ~~G~~~N~~f~n~~mP~~l~~~qg~~~~~G~~i~-M~~pL~d---------~~v~y~dgtpat-----~~q~a~DVvaFL 215 (269)
T 2qjy_B 151 PDGFYYNRAFQNGSVPDTCKDANGVKTTAGSWIA-MPPPLMD---------DLVEYADGHDAS-----VHAMAEDVSAFL 215 (269)
T ss_dssp CTTCEEESSCCSSBCCGGGBCTTSCBCSSSEEES-SCCCCCT---------TSSCCTTCCCCC-----HHHHHHHHHHHH
T ss_pred CCcccccccccCCCCCcchhcccCCccCCCcccc-ccccccc---------ccccCCCCCHHH-----HHHHHHHHHHHH
Confidence 456788888876554 1100 011224444 3555655 334344445555 478999999999
Q ss_pred HHHH
Q 042009 95 KSRA 98 (262)
Q Consensus 95 ~~Ra 98 (262)
.-=|
T Consensus 216 ~waa 219 (269)
T 2qjy_B 216 MWAA 219 (269)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8543
No 152
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=31.67 E-value=91 Score=26.59 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=15.9
Q ss_pred HHHHHHHhhccCc--eEEEEecc
Q 042009 93 FLKSRAAEMVAGG--RMVLSLMG 113 (262)
Q Consensus 93 FL~~Ra~EL~~GG--~mvl~~~g 113 (262)
.|..-.+=|+||| .+++....
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCeEEEEEeCC
Confidence 4555566799999 99987765
No 153
>1pp9_D Cytochrome C-1, cytochrome C1, heme protein, mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: a.3.1.3 f.23.11.1 PDB: 1bgy_D* 1be3_D* 1l0n_D* 1ntk_D* 1ntm_D* 1ntz_D* 1nu1_D* 1l0l_D* 1ppj_D* 1sqb_D* 1sqp_D* 1sqq_D* 1sqv_D* 1sqx_D* 2a06_D* 2fyu_D* 2ybb_D* 1bcc_D* 2bcc_D* 3bcc_D* ...
Probab=31.62 E-value=40 Score=29.19 Aligned_cols=51 Identities=18% Similarity=0.396 Sum_probs=31.5
Q ss_pred ccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042009 21 VAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRA 98 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 98 (262)
.||-+|+.+||.+ |++- |..+.+. -|-+...++.+ .+|..+|+.+||.-=|
T Consensus 144 ~~G~~~N~~Fpg~------------~iaM-P~~L~~~---------~v~y~dGtp~~-----~~q~a~Dvv~FL~w~a 194 (241)
T 1pp9_D 144 REGLYFNPYFPGQ------------AIGM-APPIYNE---------VLEFDDGTPAT-----MSQVAKDVCTFLRWAA 194 (241)
T ss_dssp CTTCEECTTSTTS------------EESS-CCCCCTT---------SSCCTTCCCCC-----HHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCC------------cccc-ccccccc---------ceecCCCCccc-----hHHHHHHHHHHHHHhc
Confidence 5777999999864 3333 5555441 12222233444 4689999999998543
No 154
>1zrt_D Cytochrome C1; cytochrome BC1, membrane protein, heme protein, rieske iron sulfur protein; HET: HEM SMA HEC; 3.50A {Rhodobacter capsulatus}
Probab=28.57 E-value=66 Score=28.08 Aligned_cols=63 Identities=19% Similarity=0.377 Sum_probs=32.9
Q ss_pred ccCccccccCCCCcc-ceEEc-----ccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHHHH
Q 042009 21 VAGSFYDRLFPDKSL-HFVHS-----SSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFL 94 (262)
Q Consensus 21 vpgSFY~rlfP~~Sv-h~~~S-----s~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 94 (262)
.+|-+|+.+||.-.. |.... -..=+|++- |+.+.+ +.|-....++++ .+|..+|+.+||
T Consensus 149 ~~g~~~N~~f~n~~mP~~l~~~qg~~~~~G~~iaM-~~~L~~---------~~v~y~dgtpat-----~~q~a~DVv~FL 213 (258)
T 1zrt_D 149 IDGYYYNKTFQIGGVPDTCKDAAGVKITHGSWARM-PPPLVD---------DQVTYEDGTPAT-----VDQMAQDVSAFL 213 (258)
T ss_dssp CSSCCCCSSCCSC--CCSCC---SSSCSSCCCCSC-CCSCSS---------CSSCCTTCCCCC-----HHHHHHHHHHHH
T ss_pred CccccccccccCCCCCcchhcccCccCCCCccccc-cccccc---------ccccCCCCCHHH-----HHHHHHHHHHHH
Confidence 356678888775444 11000 002345553 444544 234333444554 478999999999
Q ss_pred HHHH
Q 042009 95 KSRA 98 (262)
Q Consensus 95 ~~Ra 98 (262)
.-=|
T Consensus 214 ~waa 217 (258)
T 1zrt_D 214 MWAA 217 (258)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8543
No 155
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=27.88 E-value=29 Score=28.81 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHh
Q 042009 127 QWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQ 169 (262)
Q Consensus 127 ~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie 169 (262)
+|+-|-+-++.|+++|.|+++.++.+ .+..+++|+-+.|+
T Consensus 149 fw~~l~~~l~~~~~~Gfi~~~~~~~i---~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 149 HFDGLRAWLSELADTGYVSRTAMERL---IVVDNLDDALQACA 188 (189)
T ss_dssp TTHHHHHHHHHHHHTTSSCHHHHHHE---EEESSHHHHHHHHC
T ss_pred cchHHHHHHHHHHHCCCCCHHHcCeE---EEeCCHHHHHHHhc
Confidence 56767777789999999999975544 57888999887765
No 156
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=27.54 E-value=1.1e+02 Score=25.48 Aligned_cols=45 Identities=13% Similarity=-0.029 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCCceEEEEEEe
Q 042009 129 ELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGH 181 (262)
Q Consensus 129 ~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~gsF~I~~le~ 181 (262)
.++..+.+-|...|.+=-. -.+..+.+++.+.+++.| |++.+...
T Consensus 199 ~~l~~~~~~LkpgG~lils-------~~~~~~~~~v~~~l~~~G-f~~~~~~~ 243 (254)
T 2nxc_A 199 ALAPRYREALVPGGRALLT-------GILKDRAPLVREAMAGAG-FRPLEEAA 243 (254)
T ss_dssp HHHHHHHHHEEEEEEEEEE-------EEEGGGHHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEE-------eeccCCHHHHHHHHHHCC-CEEEEEec
Confidence 4455555545445543211 122346889999999888 88766543
No 157
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=27.47 E-value=21 Score=28.95 Aligned_cols=16 Identities=6% Similarity=0.391 Sum_probs=13.3
Q ss_pred HHhhccCceEEEEecc
Q 042009 98 AAEMVAGGRMVLSLMG 113 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g 113 (262)
.+-|+|||+|++.+..
T Consensus 180 ~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 180 VDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHEEEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEEcc
Confidence 4568999999999864
No 158
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=27.01 E-value=1.2e+02 Score=26.90 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=15.0
Q ss_pred HHHHHHhhccCceEEEEecc
Q 042009 94 LKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 94 L~~Ra~EL~~GG~mvl~~~g 113 (262)
++.=.+=|+|||+|++....
T Consensus 183 l~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 183 FEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEecC
Confidence 33335779999999998864
No 159
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=26.31 E-value=36 Score=26.39 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHH-HHHHhcCCceEEEEEEeEe
Q 042009 127 QWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEEL-KMAIQKEGSFIIDRLGHFE 183 (262)
Q Consensus 127 ~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev-~~~ie~~gsF~I~~le~~~ 183 (262)
+=..|.++|.+|+.+|.|+++..... +-.|-.+..|. ..-+...-+|+ -++.++.
T Consensus 14 iG~aL~dtLdEli~~~~Isp~la~kV-L~~FDksi~~aL~~~vksk~sfK-G~L~tYr 69 (121)
T 1nh2_D 14 IGNSLVDALDTLISDGRIEASLAMRV-LETFDKVVAETLKDNTQSKLTVK-GNLDTYG 69 (121)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHH-HHHHHHHHHHHHHHSCCCEEEEE-EEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHH-HHHHHHHHHHHHHHHhccCCeEE-eeecccc
Confidence 34579999999999999999864433 22333333332 12222222355 5555543
No 160
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=26.03 E-value=42 Score=24.00 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=24.9
Q ss_pred hcccccCcccCCHHHHHHHHhcC---CceEEEEEE
Q 042009 149 LDSFNAPYYAPCPEELKMAIQKE---GSFIIDRLG 180 (262)
Q Consensus 149 ~dsfn~P~y~ps~~Ev~~~ie~~---gsF~I~~le 180 (262)
..+|-+|+|..|+||-.+.-|.+ .-|.|.++.
T Consensus 44 ~~s~EVPV~A~sLdEAlE~AE~eYeeaGF~V~RVR 78 (84)
T 2lmc_A 44 EHSFEVPIYAETLDEALELAEWQYVPAGFEVTRVR 78 (84)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHTTGGGTCEEEEEE
T ss_pred cceEEEeeecccHHHHHHHHHHHhhhccceEEEec
Confidence 45688999999999998888732 238888765
No 161
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=25.59 E-value=33 Score=29.09 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=11.5
Q ss_pred hhccCceEEEEeccc
Q 042009 100 EMVAGGRMVLSLMGR 114 (262)
Q Consensus 100 EL~~GG~mvl~~~g~ 114 (262)
=|+|||+|++.+-.+
T Consensus 170 ~LkpGG~lvisik~~ 184 (232)
T 3id6_C 170 FLKVNGDMLLVIKAR 184 (232)
T ss_dssp HEEEEEEEEEEEC--
T ss_pred hCCCCeEEEEEEccC
Confidence 599999999996543
No 162
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=25.13 E-value=35 Score=32.12 Aligned_cols=19 Identities=53% Similarity=0.611 Sum_probs=14.8
Q ss_pred HHHHHHHHhhccCceEEEE
Q 042009 92 IFLKSRAAEMVAGGRMVLS 110 (262)
Q Consensus 92 ~FL~~Ra~EL~~GG~mvl~ 110 (262)
.-|+...+.|+|||++|+.
T Consensus 269 ~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 269 HQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHHHHTTSCTTCEEEES
T ss_pred HHHHHHHHcCCCCcEEEEe
Confidence 3345556899999999987
No 163
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=24.27 E-value=74 Score=24.79 Aligned_cols=26 Identities=12% Similarity=-0.051 Sum_probs=17.5
Q ss_pred HHHHHHHHH--hhccCceEEEEecccCC
Q 042009 91 LIFLKSRAA--EMVAGGRMVLSLMGRRS 116 (262)
Q Consensus 91 ~~FL~~Ra~--EL~~GG~mvl~~~g~~~ 116 (262)
..+|+.-.+ =|+|||++++....+..
T Consensus 131 ~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 131 DAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 333443344 79999999998776543
No 164
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=23.97 E-value=48 Score=27.05 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhccCceEEEEecc
Q 042009 89 NFLIFLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 89 D~~~FL~~Ra~EL~~GG~mvl~~~g 113 (262)
|...+|+.=++-|+|||++++.+..
T Consensus 123 ~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 123 DLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 3445555556789999999988754
No 165
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=23.95 E-value=51 Score=25.50 Aligned_cols=21 Identities=14% Similarity=0.321 Sum_probs=15.1
Q ss_pred HHHHHHHhhccCceEEEEecc
Q 042009 93 FLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 93 FL~~Ra~EL~~GG~mvl~~~g 113 (262)
+|+.=.+-|+|||++++....
T Consensus 117 ~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 117 AIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHEEEEEEEEEEEC-
T ss_pred HHHHHHHhcCCCcEEEEEEeC
Confidence 344445779999999998653
No 166
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=23.68 E-value=1.8e+02 Score=23.94 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=14.6
Q ss_pred ccCccccccCCCCccceEEc
Q 042009 21 VAGSFYDRLFPDKSLHFVHS 40 (262)
Q Consensus 21 vpgSFY~rlfP~~Svh~~~S 40 (262)
+-+.+..-.+|++++|++++
T Consensus 158 ~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 158 VVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp ECSCGGGCCCCTTCEEEEEE
T ss_pred EECchHhcCCCCCceeEEEE
Confidence 44566666677888999887
No 167
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=23.55 E-value=45 Score=27.30 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhccCChhhhccc
Q 042009 129 ELLAQALMSLVTERLIEEEKLDSF 152 (262)
Q Consensus 129 ~~l~~al~dmv~eGli~~e~~dsf 152 (262)
..++++..|.|.||+|++++.|..
T Consensus 88 ~avA~AVaD~V~eG~iP~~~a~dl 111 (169)
T 1y60_A 88 HGVAMAVQDAVAEGIIPADEADDL 111 (169)
T ss_dssp HHHHHHHHHHHHTTSSCTTTGGGE
T ss_pred HHHHHHHHHHHHcCCCChhhcCcE
Confidence 367899999999999999976554
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=23.40 E-value=69 Score=26.58 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=14.3
Q ss_pred HHHHHHHhhccCceEEEEec
Q 042009 93 FLKSRAAEMVAGGRMVLSLM 112 (262)
Q Consensus 93 FL~~Ra~EL~~GG~mvl~~~ 112 (262)
+|+.=.+=|+|||++++.-.
T Consensus 152 ~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 152 YLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHHHHHHTCCTTCEEEEECC
T ss_pred HHHHHHHhcCCCeEEEEeCC
Confidence 34443577999999988754
No 169
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=23.01 E-value=47 Score=28.44 Aligned_cols=28 Identities=11% Similarity=0.072 Sum_probs=24.6
Q ss_pred hhhhhhHHHHHhhHHHHHHHHHHHHHHH
Q 042009 212 RAVVESMFELHFGKAMMDLLFARYAEMV 239 (262)
Q Consensus 212 RA~~ep~l~~hfge~I~delF~r~~~~v 239 (262)
+.|.|.+++++.|+.|.+.||.+.+..+
T Consensus 96 ~dW~E~LvKaYVgdgla~DFy~~ia~~L 123 (225)
T 3ez0_A 96 ADWYESLMKAYVIDTVSADFYRAISRYV 123 (225)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CChHHHHHHHHHHhhHHHHHHHHHHhhC
Confidence 6799999999999999999999877543
No 170
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=21.46 E-value=79 Score=27.56 Aligned_cols=16 Identities=25% Similarity=0.214 Sum_probs=12.9
Q ss_pred HHhhccCceEEEEecc
Q 042009 98 AAEMVAGGRMVLSLMG 113 (262)
Q Consensus 98 a~EL~~GG~mvl~~~g 113 (262)
.+=|+|||+|++....
T Consensus 182 ~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 182 KAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHTEEEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEccC
Confidence 5679999999998543
No 171
>3cx5_D Cytochrome C1, heme protein, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: a.3.1.3 f.23.11.1 PDB: 1kyo_D* 2ibz_D* 3cxh_D* 1kb9_D* 1p84_D* 1ezv_D*
Probab=21.41 E-value=79 Score=27.41 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 042009 83 SLQFQNNFLIFLKSRA 98 (262)
Q Consensus 83 ~~Q~~~D~~~FL~~Ra 98 (262)
.+|..+|+.+||.-=|
T Consensus 183 ~~q~a~Dvv~FL~w~a 198 (248)
T 3cx5_D 183 TSQMAKDVTTFLNWCA 198 (248)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc
Confidence 4689999999998544
No 172
>1jyo_E Protein tyrosine phosphatase SPTP; bacterial pathogenesis, infectious disease, virulence factor, type III secretion, chaperone, unfolded; 1.90A {Salmonella typhimurium} SCOP: d.184.1.2
Probab=21.39 E-value=21 Score=26.94 Aligned_cols=45 Identities=27% Similarity=0.297 Sum_probs=28.4
Q ss_pred eEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHH----HHHHHHHHHHHHHHHhh
Q 042009 37 FVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSL----QFQNNFLIFLKSRAAEM 101 (262)
Q Consensus 37 ~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~----Q~~~D~~~FL~~Ra~EL 101 (262)
+.|++--|+||+++|- .. | ...|++ |.+ +-++-+..||++=++|.
T Consensus 9 ~~f~~kvlt~L~~~PL--Lk-------N----------~~AVqk-~~e~~~~~N~qtL~vFL~ALa~~Y 57 (105)
T 1jyo_E 9 EKFSSKVLTWLGKMPL--FK-------N----------TEVVQK-HTENIRVQDQKILQTFLHALTEKY 57 (105)
T ss_dssp SCBTTBCEEEEECCCC--TT-------C----------HHHHHH-HHHHSCCSCHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHhCcc--cc-------c----------hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777899999994 22 1 122332 433 34667888888877765
No 173
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=21.35 E-value=1.9e+02 Score=25.71 Aligned_cols=29 Identities=7% Similarity=0.002 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhhccCceEEEEecc
Q 042009 85 QFQNNFLIFLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 85 Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g 113 (262)
...+++..+|..=.+-|+|||.|++....
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 35677888888889999999999888654
No 174
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=20.80 E-value=3e+02 Score=21.30 Aligned_cols=57 Identities=26% Similarity=0.344 Sum_probs=35.1
Q ss_pred CCCceeecCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc----------cCceEEEEecccCCCCCCCchhhHHHHHHHH
Q 042009 64 NKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMV----------AGGRMVLSLMGRRSIDPTTEESCYQWELLAQ 133 (262)
Q Consensus 64 nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~----------~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~ 133 (262)
|+--|.|++- |+.|.+-.++.+++= ++|+- -.|.|++.|-|.+ .+.+..
T Consensus 41 n~l~i~itgv-peqvrkelakeaerl--------~~efni~v~y~imgsgsgvm~i~f~gdd------------lea~ek 99 (170)
T 4hhu_A 41 NRLVIVITGV-PEQVRKELAKEAERL--------KAEFNINVQYQIMGSGSGVMVIVFEGDD------------LEALEK 99 (170)
T ss_dssp TEEEEEEESC-CHHHHHHHHHHHHHH--------HHHHTCEEEEEEECTTCCEEEEEEECSC------------HHHHHH
T ss_pred CEEEEEEeCC-cHHHHHHHHHHHHHH--------HHhcceEEEEEEEeCCceEEEEEEecCc------------HHHHHH
Confidence 3334555543 777777666555442 34432 2367777776632 578999
Q ss_pred HHHHHHHh
Q 042009 134 ALMSLVTE 141 (262)
Q Consensus 134 al~dmv~e 141 (262)
||.+|..+
T Consensus 100 alkemirq 107 (170)
T 4hhu_A 100 ALKEMIRQ 107 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
No 175
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=20.57 E-value=1.2e+02 Score=22.89 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhhccCceEEEEecccCCCCCCCchhhHH----HHHHHHHHHHHHHhccCChh
Q 042009 85 QFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQ----WELLAQALMSLVTERLIEEE 147 (262)
Q Consensus 85 Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~----~~~l~~al~dmv~eGli~~e 147 (262)
|....+..-+ ...+|+||-+| |+..+.+.. -..+.+|+..|..+|+|...
T Consensus 18 QI~~~i~~~I--~~G~l~pG~~L-----------Pser~La~~~gVSr~tVReAl~~L~~eGlv~~~ 71 (134)
T 4ham_A 18 QIVQKIKEQV--VKGVLQEGEKI-----------LSIREFASRIGVNPNTVSKAYQELERQEVIITV 71 (134)
T ss_dssp HHHHHHHHHH--HHTSSCTTCEE-----------CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHH--HcCCCCCCCCC-----------ccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE
Confidence 4444444333 37789999988 211111111 35789999999999998754
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=20.04 E-value=1.1e+02 Score=26.88 Aligned_cols=27 Identities=4% Similarity=-0.079 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhhccCceEEEEecc
Q 042009 87 QNNFLIFLKSRAAEMVAGGRMVLSLMG 113 (262)
Q Consensus 87 ~~D~~~FL~~Ra~EL~~GG~mvl~~~g 113 (262)
.+|+..+|+.=.+-|+|||.++++...
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 456677787777889999998877654
Done!