Query 042014
Match_columns 169
No_of_seqs 149 out of 651
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 22:43:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042014.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042014hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sknp_ a.37.1.1 (P:) Skn-1 {C 94.0 0.012 8.5E-07 40.0 2.1 28 68-95 47-74 (74)
2 d2oa5a1 d.362.1.1 (A:7-102) Un 71.8 1.1 7.9E-05 31.2 2.5 24 92-115 4-27 (96)
3 d1nkpa_ a.38.1.1 (A:) Myc prot 71.8 4.5 0.00033 26.2 5.7 22 122-143 63-84 (88)
4 d1uklc_ a.38.1.1 (C:) SREBP-2 66.7 4 0.00029 25.1 4.3 24 90-113 33-56 (61)
5 d1nlwa_ a.38.1.1 (A:) Mad prot 58.0 11 0.00079 23.7 5.3 14 127-140 63-76 (79)
6 d1am9a_ a.38.1.1 (A:) SREBP-1a 53.8 11 0.00082 23.9 4.9 65 79-144 12-76 (80)
7 d2azeb1 e.63.1.2 (B:201-301) T 51.9 25 0.0018 23.7 6.7 33 92-124 3-35 (101)
8 d1nkpb_ a.38.1.1 (B:) Max prot 49.0 12 0.00086 23.8 4.4 22 121-142 57-78 (83)
9 d1seta1 a.2.7.1 (A:1-110) Sery 48.8 31 0.0022 22.6 6.8 15 127-141 73-87 (110)
10 d1seta1 a.2.7.1 (A:1-110) Sery 48.3 32 0.0023 22.5 7.5 28 118-145 71-98 (110)
11 d1nlwa_ a.38.1.1 (A:) Mad prot 41.1 25 0.0018 21.8 5.0 6 126-131 69-74 (79)
12 d1nkpa_ a.38.1.1 (A:) Myc prot 40.3 40 0.0029 21.3 7.2 15 123-137 71-85 (88)
13 d1am9a_ a.38.1.1 (A:) SREBP-1a 37.4 43 0.0031 20.8 6.9 19 65-83 11-29 (80)
14 d1fxkc_ a.2.5.1 (C:) Prefoldin 34.7 51 0.0037 21.9 6.2 24 94-117 99-122 (133)
15 d1s35a2 a.7.1.1 (A:1169-1273) 31.5 54 0.0039 20.2 7.5 13 129-141 90-102 (105)
16 d1fxkc_ a.2.5.1 (C:) Prefoldin 31.3 64 0.0047 21.3 6.2 27 91-117 2-28 (133)
17 d1bf5a1 a.47.1.1 (A:136-316) S 30.5 33 0.0024 25.3 4.8 72 94-168 63-135 (181)
18 d2ncda_ c.37.1.9 (A:) Kinesin 29.9 11 0.00079 30.1 2.0 41 98-138 4-44 (368)
19 d1nkpb_ a.38.1.1 (B:) Max prot 28.0 61 0.0045 20.0 5.3 14 123-136 66-79 (83)
20 d1uklc_ a.38.1.1 (C:) SREBP-2 27.1 47 0.0034 19.7 4.4 22 120-141 35-56 (61)
21 d2p90a1 c.56.8.1 (A:6-274) Hyp 26.9 58 0.0042 24.3 5.8 29 94-122 235-263 (269)
22 d1u58a2 d.19.1.1 (A:8-144) Imm 26.0 19 0.0014 25.8 2.6 43 121-163 50-93 (137)
No 1
>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}
Probab=94.02 E-value=0.012 Score=39.96 Aligned_cols=28 Identities=36% Similarity=0.457 Sum_probs=23.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 042014 68 ERKQRRMISNRESARRSRMRKQKHLDEL 95 (169)
Q Consensus 68 eRR~RR~isNRESARRSR~RKq~~leeL 95 (169)
-|-.||.=+||.+|+++|+||-...++|
T Consensus 47 irDIRRRGKNKvAAqnCRKRKld~~d~l 74 (74)
T d1sknp_ 47 IRKIRRRGKNKVAARTCRQRRTDRHDKM 74 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhcccHHHHHHHHHhhhhhhccC
Confidence 3567889999999999999998876653
No 2
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=71.83 E-value=1.1 Score=31.22 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 042014 92 LDELWSQVVWLRNENHQLVDKLNH 115 (169)
Q Consensus 92 leeLe~qV~~L~~eN~~L~~~l~~ 115 (169)
+++|..++..|+-||..|++++..
T Consensus 4 ~EeLaaeL~rL~~ENk~LKkkl~~ 27 (96)
T d2oa5a1 4 YEEMVKEVERLKLENKTLKQKVKS 27 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999886
No 3
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.81 E-value=4.5 Score=26.22 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 042014 122 KVIQENAELKVEATELRQMLTD 143 (169)
Q Consensus 122 ~l~~EN~~Lr~e~~~Lr~~L~~ 143 (169)
.+..+...|+.+...|+.+|..
T Consensus 63 ~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 63 KLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444444433
No 4
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.68 E-value=4 Score=25.06 Aligned_cols=24 Identities=25% Similarity=0.004 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 042014 90 KHLDELWSQVVWLRNENHQLVDKL 113 (169)
Q Consensus 90 ~~leeLe~qV~~L~~eN~~L~~~l 113 (169)
+|+..|+.++..|..|+..|....
T Consensus 33 ~YI~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 33 DYIKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888888888888777776654
No 5
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.95 E-value=11 Score=23.75 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q 042014 127 NAELKVEATELRQM 140 (169)
Q Consensus 127 N~~Lr~e~~~Lr~~ 140 (169)
...|+.+...|+++
T Consensus 63 ~~~L~~~~~~L~~~ 76 (79)
T d1nlwa_ 63 IDQLQREQRHLKRQ 76 (79)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 6
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.81 E-value=11 Score=23.87 Aligned_cols=65 Identities=20% Similarity=0.119 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042014 79 ESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHVSGCHDKVIQENAELKVEATELRQMLTDL 144 (169)
Q Consensus 79 ESARRSR~RKq~~leeLe~qV~~L~~eN~~L~~~l~~l~~~~~~l~~EN~~Lr~e~~~Lr~~L~~l 144 (169)
.+-|+-|.+=...+++|..-|-...... .=..-|......+..|..++..|.++...|+..+...
T Consensus 12 ~~Er~RR~~in~~~~~L~~llP~~~~k~-~K~~iL~~a~~yI~~L~~~~~~L~~e~~~lk~~~~~~ 76 (80)
T d1am9a_ 12 AIEKRYRSSINDKIIELKDLVVGTEAKL-NKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKS 76 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444566677766554221100 0011122333344556666666666666666665543
No 7
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.91 E-value=25 Score=23.71 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 042014 92 LDELWSQVVWLRNENHQLVDKLNHVSGCHDKVI 124 (169)
Q Consensus 92 leeLe~qV~~L~~eN~~L~~~l~~l~~~~~~l~ 124 (169)
+..|..+++.|..+=..|-..+..+.+++..+.
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456666777776666666666666655555544
No 8
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.99 E-value=12 Score=23.76 Aligned_cols=22 Identities=23% Similarity=0.209 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 042014 121 DKVIQENAELKVEATELRQMLT 142 (169)
Q Consensus 121 ~~l~~EN~~Lr~e~~~Lr~~L~ 142 (169)
..+..+...|+.+...|+..|.
T Consensus 57 ~~l~~~~~~l~~~~~~L~~~l~ 78 (83)
T d1nkpb_ 57 HTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444443
No 9
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=48.82 E-value=31 Score=22.63 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q 042014 127 NAELKVEATELRQML 141 (169)
Q Consensus 127 N~~Lr~e~~~Lr~~L 141 (169)
-..|+.++..|...+
T Consensus 73 ~k~lk~~i~~le~~~ 87 (110)
T d1seta1 73 GKALGEEAKRLEEAL 87 (110)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 10
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=48.35 E-value=32 Score=22.52 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042014 118 GCHDKVIQENAELKVEATELRQMLTDLQ 145 (169)
Q Consensus 118 ~~~~~l~~EN~~Lr~e~~~Lr~~L~~l~ 145 (169)
++...+..+=..|.+++..+...|..+-
T Consensus 71 ~~~k~lk~~i~~le~~~~~~~~~l~~~l 98 (110)
T d1seta1 71 ARGKALGEEAKRLEEALREKEARLEALL 98 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555555555555544
No 11
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.12 E-value=25 Score=21.84 Aligned_cols=6 Identities=50% Similarity=0.628 Sum_probs=2.2
Q ss_pred HHHHHH
Q 042014 126 ENAELK 131 (169)
Q Consensus 126 EN~~Lr 131 (169)
++..|+
T Consensus 69 ~~~~L~ 74 (79)
T d1nlwa_ 69 EQRHLK 74 (79)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 12
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.27 E-value=40 Score=21.27 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHH
Q 042014 123 VIQENAELKVEATEL 137 (169)
Q Consensus 123 l~~EN~~Lr~e~~~L 137 (169)
+..+|..|+.++..|
T Consensus 71 l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 71 LRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 444555555555444
No 13
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.38 E-value=43 Score=20.85 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=10.8
Q ss_pred cHHHHHHHHHHHhHHHHHH
Q 042014 65 IINERKQRRMISNRESARR 83 (169)
Q Consensus 65 ~~deRR~RR~isNRESARR 83 (169)
..-||+.|..|.+.-..=+
T Consensus 11 ~~~Er~RR~~in~~~~~L~ 29 (80)
T d1am9a_ 11 NAIEKRYRSSINDKIIELK 29 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456666666666654433
No 14
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=34.73 E-value=51 Score=21.86 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 042014 94 ELWSQVVWLRNENHQLVDKLNHVS 117 (169)
Q Consensus 94 eLe~qV~~L~~eN~~L~~~l~~l~ 117 (169)
+|+..+..|..+-..+..++..+.
T Consensus 99 ~l~~~~~~l~~~~~~~~~~i~~l~ 122 (133)
T d1fxkc_ 99 ELESTLQKMGENLRAITDIMMKLS 122 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 15
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.49 E-value=54 Score=20.21 Aligned_cols=13 Identities=23% Similarity=0.212 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 042014 129 ELKVEATELRQML 141 (169)
Q Consensus 129 ~Lr~e~~~Lr~~L 141 (169)
.|+..+...+.+|
T Consensus 90 ~l~~~~~~r~~~L 102 (105)
T d1s35a2 90 KNNEKAQEASVLL 102 (105)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 3333444444443
No 16
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=31.30 E-value=64 Score=21.31 Aligned_cols=27 Identities=15% Similarity=0.234 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042014 91 HLDELWSQVVWLRNENHQLVDKLNHVS 117 (169)
Q Consensus 91 ~leeLe~qV~~L~~eN~~L~~~l~~l~ 117 (169)
.+++|..++..|+.+-..|..++..+.
T Consensus 2 ~L~eL~~~~~~l~~~l~~l~~~i~~l~ 28 (133)
T d1fxkc_ 2 ALAEIVAQLNIYQSQVELIQQQMEAVR 28 (133)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777777777777777666554
No 17
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.53 E-value=33 Score=25.27 Aligned_cols=72 Identities=18% Similarity=0.190 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-CCCCCCCCCcchhhhh
Q 042014 94 ELWSQVVWLRNENHQLVDKLNHVSGCHDKVIQENAELKVEATELRQMLTDLQLNSHYSS-LKDLDDVPCCNAADLL 168 (169)
Q Consensus 94 eLe~qV~~L~~eN~~L~~~l~~l~~~~~~l~~EN~~Lr~e~~~Lr~~L~~l~~~~~~~~-~~~l~~~~~~~~~~~~ 168 (169)
.|...+..|...-..+..++..+......+ .+..|..++.+.+++=.-.-++.|+.. |..|..| |...|+++
T Consensus 63 ~l~~~~~~L~~~R~e~~~k~~~~l~~~~~l--q~~ll~~eL~eWKr~QQ~a~iG~p~~~~LdqLQ~W-~e~lae~l 135 (181)
T d1bf5a1 63 LLKKMYLMLDNKRKEVVHKIIELLNVTELT--QNALINDELVEWKRRQQSACIGGPPNACLDQLQNW-FTIVAESL 135 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSSCCCCTHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCcccHHHHHHH-HHHHHHHH
Confidence 455556666666666666666655433333 355788889888877677778888753 4444333 45555543
No 18
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=29.91 E-value=11 Score=30.09 Aligned_cols=41 Identities=22% Similarity=0.106 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 042014 98 QVVWLRNENHQLVDKLNHVSGCHDKVIQENAELKVEATELR 138 (169)
Q Consensus 98 qV~~L~~eN~~L~~~l~~l~~~~~~l~~EN~~Lr~e~~~Lr 138 (169)
++++|...++++..+++.+.+++.+...+=..|.-++.+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 44 (368)
T d2ncda_ 4 RTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLR 44 (368)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 44555555556666666555555444333333444444444
No 19
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.04 E-value=61 Score=20.04 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHH
Q 042014 123 VIQENAELKVEATE 136 (169)
Q Consensus 123 l~~EN~~Lr~e~~~ 136 (169)
+..+|..|..++..
T Consensus 66 l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 66 LKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444433
No 20
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.12 E-value=47 Score=19.73 Aligned_cols=22 Identities=23% Similarity=0.131 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 042014 120 HDKVIQENAELKVEATELRQML 141 (169)
Q Consensus 120 ~~~l~~EN~~Lr~e~~~Lr~~L 141 (169)
+..|..++..|.++...|+...
T Consensus 35 I~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 35 IKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555555555554443
No 21
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=26.91 E-value=58 Score=24.28 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 042014 94 ELWSQVVWLRNENHQLVDKLNHVSGCHDK 122 (169)
Q Consensus 94 eLe~qV~~L~~eN~~L~~~l~~l~~~~~~ 122 (169)
+.+.++.++..++.++..-++.|.+++++
T Consensus 235 ~~e~~i~~l~e~~~e~~~~v~~LE~~yD~ 263 (269)
T d2p90a1 235 KVHRQLMEQTEESSEIQRVVGALEQQYDS 263 (269)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHhHhh
Confidence 34455555555666666656555555543
No 22
>d1u58a2 d.19.1.1 (A:8-144) Immunomodulatory protein m144, alpha-1 and alpha-2 domains {Murine cytomegalovirus [TaxId: 10366]}
Probab=26.01 E-value=19 Score=25.77 Aligned_cols=43 Identities=30% Similarity=0.390 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCC-CCCcc
Q 042014 121 DKVIQENAELKVEATELRQMLTDLQLNSHYSSLKDLDD-VPCCN 163 (169)
Q Consensus 121 ~~l~~EN~~Lr~e~~~Lr~~L~~l~~~~~~~~~~~l~~-~~~~~ 163 (169)
..|..||.....++.+|...|..|+..+.+..++.|.- +-|.+
T Consensus 50 ~~ve~E~~eF~rrC~EL~aELdKm~Nvs~~~G~ktlqld~gCts 93 (137)
T d1u58a2 50 SHVEEENKEFVRQCKELQAELDKMQNNSKVIGVKTVQLDVGCTS 93 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSSTTTTCCEEEEEEEESS
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhchhhhcceeEEEEecCccc
Confidence 45788999999999999999999998888876666554 55554
Done!