BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042017
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9URY4|YI01_SCHPO Putative amidase C869.01 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC869.01 PE=3 SV=1
Length = 583
Score = 103 bits (258), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 2 PYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGV 61
P+ L+ +P GSSSGSAISVA+N+ A +LGTETDGSI+ P+ N VVGLKPT+GLTSR GV
Sbjct: 212 PFNLTVNPGGSSSGSAISVASNMIAFALGTETDGSIIDPAMRNGVVGLKPTVGLTSRYGV 271
Query: 62 IPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPR-GGYKQFL-RPHGL 119
IP + QD+ GPI RTV DA YV ++ G D D T + P G Y +FL L
Sbjct: 272 IPESEHQDTTGPIARTVRDAVYVFQSMWGIDENDIYTLNQTGKTPEDGDYMKFLSNKTSL 331
Query: 120 KGKRLGI 126
+G R G+
Sbjct: 332 EGARFGL 338
>sp|A7GIK2|GATA_CLOBL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=gatA PE=3 SV=1
Length = 485
Score = 97.4 bits (241), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + AIAG D D T A + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT--ADKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GKR+GI + F
Sbjct: 258 GKRIGIPKEFF 268
>sp|C1FLD9|GATA_CLOBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1
Length = 485
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA A +SLGT+T GS+ P+S +VGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + AIAG D D T A + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT--ADKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GK++GI + F
Sbjct: 258 GKKIGIPKEFF 268
>sp|C3KU97|GATA_CLOB6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1
Length = 485
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA A +SLGT+T GS+ P+S +VGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + AIAG D D T A + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT--ADKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GK++GI + F
Sbjct: 258 GKKIGIPKEFF 268
>sp|C1D1L2|GATA_DEIDV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA
PE=3 SV=1
Length = 487
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA++VAANL VSLG++T GS+ P++ V GLKPT G SR G
Sbjct: 139 NPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAALTGVYGLKPTYGRVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R+ AD A +++ +AG D D + A G P LK
Sbjct: 199 LVAYASSLDQIGPFARSAADLALLMNVVAGHDPRDATSLEAPARFQAGA------PEDLK 252
Query: 121 GKRLGIVRNPF 131
G R+G++R
Sbjct: 253 GLRVGVIRESL 263
>sp|A5I6Z3|GATA_CLOBH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type
A) GN=gatA PE=3 SV=1
Length = 485
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + IAG D D T + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKKDFTT--VDKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GKR+GI + F
Sbjct: 258 GKRIGIPKEFF 268
>sp|A7FYL3|GATA_CLOB1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1
Length = 485
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + IAG D D T + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKKDFTT--VDKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GKR+GI + F
Sbjct: 258 GKRIGIPKEFF 268
>sp|B1INF7|GATA_CLOBK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Okra / Type B1) GN=gatA PE=3 SV=1
Length = 485
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++VA + A +SLGT+T GS+ P+S VVGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVAGSEATLSLGTDTGGSVRQPASFCGVVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + IAG D D T + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSVIAGLDKKDFTT--VDKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GKR+GI + F
Sbjct: 258 GKRIGIPKEFF 268
>sp|B1L1G9|GATA_CLOBM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=gatA PE=3
SV=1
Length = 485
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA++V+ A +SLGT+T GS+ P+S +VGLKPT G SR+G
Sbjct: 143 NPWDLERVPGGSSGGSAVAVSGCEATLSLGTDTGGSVRQPASFCGIVGLKPTYGRISRSG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
V+ D VGP+ + V D A + AIAG D D T A + +P YK+ L +K
Sbjct: 203 VVAFGSTLDQVGPMGKDVEDCALLTSAIAGLDKKDFTT--ADKEVP--DYKKSL-TKDIK 257
Query: 121 GKRLGIVRNPF 131
GK++GI + F
Sbjct: 258 GKKIGIPKEFF 268
>sp|Q3A2K0|GATA_PELCD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gatA PE=3
SV=1
Length = 485
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ P GSS GSA VAA A +LGT+T GSI P+S VVGLKPT G SR G
Sbjct: 142 NPWNQDCVPGGSSGGSAACVAARQAVATLGTDTGGSIRQPASHCGVVGLKPTYGRVSRYG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
VI D VGP+ R V D A +L A+AG YDPA + S P Y+ L+ G++
Sbjct: 202 VIAYASSLDQVGPLTRDVEDCALMLGAVAG---YDPAD-STSINTPVPDYQAALK-QGIQ 256
Query: 121 GKRLGIVRNPFFNFDEG--SPLAQVFDHHLHTLR 152
G ++G+ + F EG + + Q D + TLR
Sbjct: 257 GLKIGLPKEYFI---EGLDTDIRQTIDKAIATLR 287
>sp|Q88XP7|GATA_LACPL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Lactobacillus
plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
GN=gatA PE=3 SV=1
Length = 487
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ +S P GSS GSA++VA+ V+LG++T GSI PSS N +VG+KPT G SR G
Sbjct: 141 NPWDISRVPGGSSGGSAVAVASGQVPVALGSDTGGSIRQPSSFNGIVGMKPTYGRVSRWG 200
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIP 106
+I D +GP+ RTV D A L+ IAG D +D T ++ + +P
Sbjct: 201 LIAFGSSLDQIGPMTRTVKDNAAALNMIAGNDVHD--TTSSKQTVP 244
>sp|Q97EX8|GATA2_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=gatA2 PE=3 SV=1
Length = 478
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP ++ P GSS GSA VAA +A +SLG++T GSI P++ VVGLKPT GL SR G
Sbjct: 143 NPRDITRVPGGSSGGSAAVVAAKMAPISLGSDTGGSIRQPAAFCGVVGLKPTYGLVSRFG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+I D +GP+ +TV D A +L+ I+G D D + E + Y + + G+K
Sbjct: 203 LIAFASSLDQIGPLGKTVKDCAELLEVISGEDELDNTSSKKHE---KEDYLEGI-DDGIK 258
Query: 121 GKRLGIVRNPFFN 133
G ++G+ + F N
Sbjct: 259 GMKIGMPKE-FLN 270
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA
PE=3 SV=1
Length = 485
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA VA+ +A SLG++T GSI P++ VVGLKPT G SR G
Sbjct: 143 NPWDLERVPGGSSGGSAAVVASGMAPASLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV D A +++ I+G D D +R+ IP Y + L +K
Sbjct: 203 LVAFASSLDQIGPFGRTVEDVAMIMNVISGKDPKDSTSRS----IPVPNYLESLN-KDVK 257
Query: 121 GKRLGI 126
G ++G+
Sbjct: 258 GLKIGL 263
>sp|B0JSX3|GATA_MICAN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Microcystis
aeruginosa (strain NIES-843) GN=gatA PE=3 SV=1
Length = 483
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA +VAA V+LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLSRVPGGSSGGSAAAVAAQECVVALGSDTGGSIRQPASFCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV DAA +L AIAG+D D + S +P Y QFL+ LK
Sbjct: 199 LVAYASSLDQIGPFGRTVEDAAILLQAIAGYDPQD----STSLNLPIPDYSQFLKT-SLK 253
Query: 121 GKRLGIVRNPF 131
G ++G+++ F
Sbjct: 254 GLKIGVIKETF 264
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatA PE=3 SV=1
Length = 476
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA VAA A +LG++T GS+ CP+S VVGLKPT G SR G
Sbjct: 134 NPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCGVVGLKPTYGAVSRYG 193
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT-RAASEY 104
V+ + VGP+ V D A ++D IAG+D D + + +EY
Sbjct: 194 VVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRDSTSIDSKTEY 238
>sp|Q6AQK1|GATA_DESPS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=gatA PE=3
SV=1
Length = 485
Score = 87.0 bits (214), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ GSS GSA++VAA S+GT+T GSI P++ VVG+KPT G SR G
Sbjct: 142 NPWKEGYVAGGSSGGSAVTVAAQECFFSIGTDTGGSIRQPAALCGVVGMKPTYGRVSRYG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+ D GP+CRTVAD A V+++I G+D D + + ++ +P Y L G+K
Sbjct: 202 LTAFASSLDQAGPLCRTVADTALVMNSICGYDPMD--STSINQEVP--DYTASL-VEGVK 256
Query: 121 GKRLGIVRNPF 131
G R+GI + F
Sbjct: 257 GLRIGIPKEYF 267
>sp|Q31F53|GATA_THICR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiomicrospira
crunogena (strain XCL-2) GN=gatA PE=3 SV=1
Length = 484
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L A P GSS GSA +AA LA ++ G++T GSI P+S + G+KPT G SR G
Sbjct: 140 NPWDLKAVPGGSSGGSAAVIAAGLAPLATGSDTGGSIRQPASFCGITGIKPTYGAVSRYG 199
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+I D GP+ R+ ++A++LD IAGFD D + S P+ Y L +K
Sbjct: 200 MIAYASSFDQGGPMTRSAEESAWLLDVIAGFDERD----STSLEQPKQDYVSTLN-DDIK 254
Query: 121 GKRLGIVRNPFFNFDEG 137
G ++G+ P F+EG
Sbjct: 255 GLKVGV---PAEYFEEG 268
>sp|B8I601|GATA_CLOCE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=gatA PE=3 SV=1
Length = 486
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA V+A+LA SLG++T GS+ P+S VVG+KPT GL SR G
Sbjct: 142 NPFDLTRVPGGSSGGSAACVSASLALGSLGSDTGGSVRQPASFCGVVGMKPTYGLVSRYG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYD 95
++ D +GPI +TV D A +LD+I G D D
Sbjct: 202 LVAFASSFDQIGPIAKTVEDCAIILDSICGNDPKD 236
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1
Length = 475
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA VAA A +LG++T GS+ CP++ VVGLKPT G SR G
Sbjct: 133 NPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYG 192
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT-RAASEY 104
V+ + VGP+ V D A ++D IAG+D D + + +EY
Sbjct: 193 VVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKDSTSIDSKTEY 237
>sp|A5GTM0|GATA_SYNR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain RCC307) GN=gatA PE=3 SV=1
Length = 485
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ P GSS GSA VAA V+LG++T GSI P+S VVGLKPT G SR G
Sbjct: 138 NPWDPGRVPGGSSGGSAACVAAGQCDVALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWG 197
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFL-RPHGL 119
++ D +GP RTVAD+A VL IAG D D + S +P Y L RP +
Sbjct: 198 LVAFASSLDQIGPFSRTVADSAAVLQVIAGHDPRD----STSLDVPVPDYSAALNRP--I 251
Query: 120 KGKRLGIVRNPFFN 133
+G ++GI++ F
Sbjct: 252 QGLKIGILQEAFVE 265
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatA PE=3 SV=1
Length = 476
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA VAA A +LG++T GS+ CP++ VVGLKPT G SR G
Sbjct: 134 NPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCGVVGLKPTYGAVSRYG 193
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT-RAASEYIPRGGYKQFLRPHGL 119
V+ + VGP+ V D A ++D IAG+D D + + +EY Q +
Sbjct: 194 VVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRDSTSIDSKTEY-------QKALVDDV 246
Query: 120 KGKRLGIVRNPF 131
KG ++G+ + F
Sbjct: 247 KGLKIGVPKEFF 258
>sp|O69768|AMID_PSEPU Amidase OS=Pseudomonas putida PE=3 SV=1
Length = 466
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLK-PTLGLTSRA 59
NP P GSS GSA +VAA ++ GT+T GS+ PSS + VGLK PT+G A
Sbjct: 137 NPRDPGRTPGGSSGGSAATVAACCVYLATGTDTGGSVRIPSSMCNTVGLKQPTVGRVHGA 196
Query: 60 GVIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGL 119
GV ++ D GPI RTV D A +L +AGFD DP R+ E +P Y + L G+
Sbjct: 197 GVSSLSWSLDHPGPITRTVEDTALMLQVMAGFDPADP--RSLDEPVP--SYAEGL-GQGV 251
Query: 120 KGKRLGIVRNPFFN 133
KG R G+ +N FF+
Sbjct: 252 KGLRWGVPKNYFFD 265
>sp|B7KLL5|GATA_CYAP7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp.
(strain PCC 7424) GN=gatA PE=3 SV=1
Length = 483
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA +VA+ V+LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLSRVPGGSSGGSAAAVASEECVVALGSDTGGSIRQPASYCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV DAA +L AIAG+D D + IP Y QFL+P L
Sbjct: 199 LVAYASSLDQIGPFARTVEDAAILLGAIAGYDPKDSTSLNVE--IP--DYTQFLKPK-LS 253
Query: 121 GKRLGIVRNPF 131
++GI++ F
Sbjct: 254 KLKIGIIKETF 264
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1
Length = 483
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ P GSS GSA++VAANL V+LG++T GS+ P++ + GLKPT G SR G
Sbjct: 139 NPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R+ AD A +++ +AG D D + A G P L+
Sbjct: 199 LVAYASSLDQIGPFARSAADLALLMNVLAGHDPRDATSLDAPPAFRPG------TPDDLQ 252
Query: 121 GKRLGIVRN 129
G R+G++R
Sbjct: 253 GLRVGVIRE 261
>sp|B7K0I2|GATA_CYAP8 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp.
(strain PCC 8801) GN=gatA PE=3 SV=1
Length = 482
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/131 (47%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA +VAA V+LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLERVPGGSSGGSAAAVAAEECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV D A VL AIAG+D D + S +P Y FL P LK
Sbjct: 199 LVAYGSSLDQIGPFGRTVEDVAIVLGAIAGYDAKD----STSLKLPIPDYTTFLNP-SLK 253
Query: 121 GKRLGIVRNPF 131
G ++GI+ F
Sbjct: 254 GVKIGIIEETF 264
>sp|B8HY89|GATA_CYAP4 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=gatA PE=3 SV=1
Length = 482
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA +VAA ++LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLQRVPGGSSGGSAAAVAAGETLIALGSDTGGSIRQPASFCGVVGLKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP V DAA +L AIAG D D + S +P Y QFL P LK
Sbjct: 199 LVAYASSLDQIGPFATNVEDAALLLGAIAGHDPQD----STSLNVPIPDYTQFLIPD-LK 253
Query: 121 GKRLGIVRNPF 131
GK++GI++ +
Sbjct: 254 GKKIGIIQETY 264
>sp|P73558|GATA_SYNY3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=gatA PE=3 SV=1
Length = 483
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA +VAA+ ++LG++T GSI P+S VVG+KPT GL SR G
Sbjct: 139 NPWDLTRVPGGSSGGSAAAVAADECLIALGSDTGGSIRQPASLCGVVGMKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R V DAA +L AIAG D D + S +P Y Q L+P LK
Sbjct: 199 LVAYASSLDQIGPFARRVEDAAILLQAIAGHDSRD----STSLDVPIPDYTQALKPD-LK 253
Query: 121 GKRLGIVRNPF 131
G ++G++ + F
Sbjct: 254 GVKVGVIMDAF 264
>sp|B9DWL8|GATA_CLOK1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
kluyveri (strain NBRC 12016) GN=gatA PE=3 SV=1
Length = 494
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSAISVAA AA+S+GT+T GSI P+S VVGLKPT G SR G
Sbjct: 143 NPWDLNRVPGGSSGGSAISVAAGEAALSIGTDTGGSIRQPASFCGVVGLKPTYGRISRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+ D +G I V D A + + I+G D D T A +P+ Y + L +K
Sbjct: 203 AVAFGSTLDQIGTIAADVEDCALLTECISGMDKRDFTT--ADMEVPK--YSKSLS-KDIK 257
Query: 121 GKRLGIVRNPF 131
G R+GI + F
Sbjct: 258 GMRIGIPKEYF 268
>sp|B8J405|GATA_DESDA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio
desulfuricans (strain ATCC 27774 / DSM 6949) GN=gatA
PE=3 SV=1
Length = 486
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA SV A SLGT+T GSI P+S VGLKPT G SR G
Sbjct: 142 NPWNLNKVPGGSSGGSAASVTAGQCFASLGTDTGGSIRQPASFCGCVGLKPTYGRVSRYG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
VI D VGP+ R+V D A VL AIAG+D D + P Y L LK
Sbjct: 202 VIAYGSSLDQVGPLTRSVEDCARVLTAIAGYDSRD----NTCDPRPAEDYAATLSSRPLK 257
Query: 121 GKRLGIVRN 129
G RLGI R
Sbjct: 258 GARLGIPRE 266
>sp|Q7NKF0|GATA_GLOVI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Gloeobacter
violaceus (strain PCC 7421) GN=gatA PE=3 SV=1
Length = 489
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA +VAA A SLG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLGRVPGGSSGGSAAAVAACEAVASLGSDTGGSIRQPASFCGVVGLKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+I D +GP RTV DAA VL AIAG D D + A + +P Y+Q L LK
Sbjct: 199 LIAFASSLDQIGPFTRTVEDAALVLQAIAGHDPLDSTSLAVN--VP--DYRQAL-ISDLK 253
Query: 121 GKRLGIVRNPF 131
G ++G V+ F
Sbjct: 254 GVKVGFVKEFF 264
>sp|B0C269|GATA_ACAM1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acaryochloris
marina (strain MBIC 11017) GN=gatA PE=3 SV=1
Length = 482
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ +S P GSS GSA +VAA+ VS+G++T GSI P++ VVGLKPT GL SR G
Sbjct: 139 NPWDVSRVPGGSSGGSAAAVAADECVVSIGSDTGGSIRQPAALCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV DAA +L IAG+D D + IP Y + L P LK
Sbjct: 199 LVAYASSLDQIGPFGRTVEDAAILLQEIAGYDPQDSTSLKVE--IP--DYSKSLIPD-LK 253
Query: 121 GKRLGIVRNPF 131
GK++G++ F
Sbjct: 254 GKKVGVITETF 264
>sp|Q5N0K5|GATA_SYNP6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gatA
PE=3 SV=1
Length = 479
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA +VAA+ V+LG++T GSI P++ VVGLKPT GL SR G
Sbjct: 139 NPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R+V D A +L AIAG D D A S + Y QFL+P L
Sbjct: 199 LVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKD----ATSLKVEVPDYTQFLKP-SLA 253
Query: 121 GKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLR 152
G ++G++ + SP Q L L+
Sbjct: 254 GIKVGVITETVTD----SPAGQAMQAALEVLQ 281
>sp|Q31LC2|GATA_SYNE7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus
elongatus (strain PCC 7942) GN=gatA PE=3 SV=1
Length = 479
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA +VAA+ V+LG++T GSI P++ VVGLKPT GL SR G
Sbjct: 139 NPWDLTRVPGGSSGGSAAAVAADECVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R+V D A +L AIAG D D A S + Y QFL+P L
Sbjct: 199 LVAYASSLDQIGPFSRSVEDTAILLGAIAGHDPKD----ATSLKVEVPDYTQFLKP-SLA 253
Query: 121 GKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLR 152
G ++G++ + SP Q L L+
Sbjct: 254 GIKVGVITETVTD----SPAGQAMQAALEVLQ 281
>sp|B1WYP3|GATA_CYAA5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp.
(strain ATCC 51142) GN=gatA PE=3 SV=1
Length = 482
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA +VAA+ V+LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDLSRVPGGSSGGSAAAVAASECVVALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R V DAA +L AIAG+D D + S P Y QFL+P L+
Sbjct: 199 LVAYASSLDQIGPFARNVQDAAILLGAIAGYDPKD----STSINTPVPDYTQFLKPS-LE 253
Query: 121 GKRLGIVRNPF 131
G +G++ F
Sbjct: 254 GLTIGVIEETF 264
>sp|B1XJG8|GATA_SYNP2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=gatA PE=3 SV=1
Length = 485
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ ++ P GSS GSA +VAA A ++LG++T GSI P+S VVGLKPT GL SR G
Sbjct: 139 NPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV D A +L+AIAG D D + IP+ Y Q L+P K
Sbjct: 199 LVAYASSLDQIGPFARTVEDTAILLEAIAGHDPKDSTSLDVD--IPQ--YSQLLQPELPK 254
Query: 121 GK--RLGIVRNPF 131
K ++GI++ F
Sbjct: 255 DKPLKIGIIQETF 267
>sp|Q8RC40|GATA_THETN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=gatA PE=3 SV=1
Length = 488
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA +VAA+ AA +LG++T GSI P+S VVG+KPT GL SR G
Sbjct: 142 NPWDLSRVPGGSSGGSAAAVAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP + V D A VL+AIAG D D + S I + Y +L+ +K
Sbjct: 202 LVAFASSLDQIGPFTKDVTDCAIVLNAIAGHDPMD----STSVKIEKPDYTSYLK-EDIK 256
Query: 121 GKRLGIVRNPF 131
G R+G+ + F
Sbjct: 257 GLRIGVAKEFF 267
>sp|Q2RGY4|GATA_MOOTA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella
thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1
Length = 487
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS G+ +VAA A +LG++T GSI P+S VVG+KPT G SR G
Sbjct: 143 NPWDLERVPGGSSGGAVAAVAAGEAYFALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GPI R V D A VL+AIAG D D + S +P Y+ L+P +K
Sbjct: 203 LVAFASSLDQIGPITRDVTDCALVLEAIAGHDPLD----STSADLPVPDYRSALKPE-VK 257
Query: 121 GKRLGIVRNPF 131
G ++G+ R F
Sbjct: 258 GLKIGVPREYF 268
>sp|Q5V2G6|GATA_HALMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=gatA PE=3 SV=1
Length = 425
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 63/103 (61%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP P GSS GSA VAA A ++LG++T GSI CP++ VVG+KPT GL SR G
Sbjct: 93 NPAAEGRVPGGSSGGSAAVVAAGDADLALGSDTGGSIRCPAAFCGVVGIKPTYGLVSRYG 152
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASE 103
+I + +GPI +V AA +LD IAG D +D T+ A E
Sbjct: 153 LIAYANSLEQIGPIAPSVEGAAELLDVIAGPDEHDATTQEAPE 195
>sp|Q8DK65|GATA_THEEB Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Thermosynechococcus elongatus (strain BP-1) GN=gatA
PE=3 SV=2
Length = 482
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 29 LGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAI 88
LG++T GSI P++ VVGLKPT GL SR G++ D +GP+ TV DAA +L AI
Sbjct: 167 LGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAI 226
Query: 89 AGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRN 129
AG D D A S +P Y Q L+P LKG R+G+++
Sbjct: 227 AGHDPKD----ATSLRVPIPDYTQALKPD-LKGMRIGLIQE 262
>sp|B2IYD7|GATA_NOSP7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=gatA PE=3 SV=1
Length = 486
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ LS P GSS GSA +V++ V+LG++T GSI P+S VVG+KPT GL SR G
Sbjct: 139 NPWNLSRVPGGSSGGSAAAVSSQECVVALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPR--GGYKQFLRPHG 118
++ D +GP TV DAA +L+AIAG D D + + IP +K +P G
Sbjct: 199 LVAYASSLDQIGPFANTVEDAAILLNAIAGHDPKDSTSLKVA--IPNYAASFKPDFKPRG 256
Query: 119 LKGKRLGIVRNPF 131
R+GIV+ F
Sbjct: 257 --QLRIGIVKETF 267
>sp|A8FAS0|GATA_BACP2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus pumilus
(strain SAFR-032) GN=gatA PE=3 SV=1
Length = 485
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/98 (53%), Positives = 60/98 (61%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA SVAA SLG++T GSI P+S VVGLKPT G SR G
Sbjct: 143 NPWNLNTVPGGSSGGSAASVAAGEVPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPAT 98
+I D +GPI R V D AYVL AIAG D D +
Sbjct: 203 LIAFASSLDQIGPITRNVEDNAYVLQAIAGVDQMDATS 240
>sp|B3DWT4|GATA_METI4 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylacidiphilum
infernorum (isolate V4) GN=gatA PE=3 SV=1
Length = 494
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 28 SLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDA 87
+LG++T GSI P++ VGLKPT G SR G+ D +GPI +TV DAA +L+
Sbjct: 163 ALGSDTGGSIRQPAAFCGCVGLKPTYGRVSRYGLTAFASSLDQIGPITKTVEDAALLLEV 222
Query: 88 IAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGS---PLAQVF 144
I+GFD +D SE +P + + L LK LGI + F +G L+QV
Sbjct: 223 ISGFDPFD----NTSEKLPVPRFSELLENRPLKDFVLGIPKEYFIEGIDGEVRQALSQVI 278
Query: 145 DHH 147
H+
Sbjct: 279 GHY 281
>sp|A0LP22|GATA_SYNFM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1
Length = 486
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ P GSS GSA +VAA+L + SLGT+T GSI P+S VVGLKPT G SR G
Sbjct: 142 NPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVSRFG 201
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GPI + V DAA +L AIAG D D + S P Y+ LR +K
Sbjct: 202 LVAFASSLDQIGPITKDVEDAAILLQAIAGHDRRD----STSVDHPVPDYRASLR-EPIK 256
Query: 121 GKRLGIVRNPFFN 133
G RLGI + F +
Sbjct: 257 GLRLGIPKEYFVH 269
>sp|Q891I1|GATA_CLOTE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium tetani
(strain Massachusetts / E88) GN=gatA PE=3 SV=1
Length = 485
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/131 (45%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA +VAA ++LGT+T GS+ P++ +VGLKPT G TSR G
Sbjct: 143 NPWDLDRVPGGSSGGSAAAVAAMETPLALGTDTGGSVRQPAAFCGLVGLKPTYGRTSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
I D VG + + V D A + IAG DH D T A +P Y QFL+ LK
Sbjct: 203 AIAFGSTLDQVGMLSKDVEDCALLTKNIAGLDHRDFTT--ADIKVP--DYTQFLK-KDLK 257
Query: 121 GKRLGIVRNPF 131
GK++GI R F
Sbjct: 258 GKKIGIPRECF 268
>sp|Q3AD36|GATA_CARHZ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatA PE=3
SV=1
Length = 485
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA SVAA A V+LG++T GSI P++ +VGLKPT G SR G
Sbjct: 143 NPWDLERVPGGSSGGSAASVAAGEAVVALGSDTGGSIRQPAAFCGIVGLKPTYGAVSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP RTV DAA +L+ IAG D D +T A EY Y FL +K
Sbjct: 203 LVAFASSLDQIGPFARTVEDAALLLNVIAGHDPKD-STSADIEY---PDYLSFLN-QDIK 257
Query: 121 GKRLGIVRNPFFN 133
G ++G+ + F +
Sbjct: 258 GLKIGLPKEYFID 270
>sp|A4J6Z8|GATA_DESRM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfotomaculum
reducens (strain MI-1) GN=gatA PE=3 SV=1
Length = 485
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L P GSS GSA +VAA A +SLG++T GSI P++ VVG+KPT G SR G
Sbjct: 143 NPWDLDRVPGGSSGGSAAAVAAGEAIISLGSDTGGSIRQPAALCGVVGMKPTYGSVSRYG 202
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D +GP R V D A+VL+ I G D D + S + + Y QFL + +K
Sbjct: 203 LVAYASSLDQIGPFTRDVTDMAHVLNVICGHDPMD----STSANLKQTDYTQFL-TNDIK 257
Query: 121 GKRLGIVR 128
G ++G+ R
Sbjct: 258 GMKIGVPR 265
>sp|Q2JUM6|GATA_SYNJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain JA-3-3Ab) GN=gatA PE=3 SV=1
Length = 509
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ L+ P GSS GSA +VAA+ A V+LG++T GSI P++ VVGLKPT GL SR G
Sbjct: 139 NPWDLTRVPGGSSGGSAAAVAADQAVVALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYG 198
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
++ D VGP RTV D A +L IAG D D + IP Y Q L P +K
Sbjct: 199 LVAFASSLDQVGPFGRTVEDVALLLQGIAGHDPLDSTSLKVE--IP--DYSQALIPE-IK 253
Query: 121 GKRLGIVRNPFFN--FDEGSPLAQVFDHHLHTL 151
G ++G++R+ +E Q HL L
Sbjct: 254 GFKIGVIRDLLGEGCGEETRAAVQAAIQHLEEL 286
>sp|Q113L8|GATA_TRIEI Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Trichodesmium
erythraeum (strain IMS101) GN=gatA PE=3 SV=1
Length = 485
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 29 LGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVADAAYVLDAI 88
LG++T GSI P+S VVG+KPT GL SR G++ D +GP+ RTV D+A +L AI
Sbjct: 167 LGSDTGGSIRQPASFCGVVGIKPTYGLVSRYGLVAYASSMDQIGPLSRTVKDSAILLQAI 226
Query: 89 AGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGK---RLGIVRNPF 131
AG+D D + S +P Y + L P+ L+ K R+G+++ F
Sbjct: 227 AGYDPKD----STSLNVPVPDYTKNLTPN-LRPKGQIRIGLIQETF 267
>sp|A2C1Y1|GATA_PROM1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain NATL1A) GN=gatA PE=3 SV=1
Length = 486
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ ++ P GSS GSA SVAA L SLG++T GSI P+S VVG+KPT G SR G
Sbjct: 138 NPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWG 197
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+I D VGP V+DAA +L I+G D D T IP Y + L +K
Sbjct: 198 LIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTTVD----IPVPNYLETLS-KSIK 252
Query: 121 GKRLGIVRNPF 131
G ++G++ N F
Sbjct: 253 GMKIGLIDNCF 263
>sp|Q46L72|GATA_PROMT Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain NATL2A) GN=gatA PE=3 SV=1
Length = 486
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAG 60
NP+ ++ P GSS GSA SVAA L SLG++T GSI P+S VVG+KPT G SR G
Sbjct: 138 NPWNITKVPGGSSGGSAASVAAGLCYGSLGSDTGGSIRQPASFCGVVGMKPTYGRVSRWG 197
Query: 61 VIPITPRQDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120
+I D VGP V+DAA +L I+G D D T IP Y + L +K
Sbjct: 198 LIAFASSLDQVGPFANNVSDAAEILQVISGKDELDSTTVD----IPVPNYLETLS-KSIK 252
Query: 121 GKRLGIVRNPF 131
G ++G++ N F
Sbjct: 253 GMKIGLIDNCF 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,237,555
Number of Sequences: 539616
Number of extensions: 2458545
Number of successful extensions: 5767
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5074
Number of HSP's gapped (non-prelim): 686
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)