Query 042017
Match_columns 156
No_of_seqs 118 out of 1215
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 13:07:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042017.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042017hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 2.3E-49 5E-54 329.5 15.1 149 1-156 146-295 (475)
2 PRK07235 amidase; Provisional 100.0 8E-48 1.7E-52 322.7 15.3 152 1-156 160-311 (502)
3 PRK00012 gatA aspartyl/glutamy 100.0 1.6E-47 3.5E-52 318.3 15.6 150 1-156 128-277 (459)
4 PF01425 Amidase: Amidase; In 100.0 6E-48 1.3E-52 315.4 12.1 153 1-156 120-272 (441)
5 TIGR00132 gatA glutamyl-tRNA(G 100.0 5.6E-47 1.2E-51 315.1 15.6 149 1-156 128-276 (460)
6 PRK08137 amidase; Provisional 100.0 4.9E-47 1.1E-51 318.0 14.8 151 1-156 151-301 (497)
7 PRK07486 amidase; Provisional 100.0 1.8E-46 4E-51 313.6 15.5 151 1-156 150-301 (484)
8 PRK06169 putative amidase; Pro 100.0 2.9E-46 6.3E-51 311.2 15.3 149 1-156 145-293 (466)
9 TIGR02715 amido_AtzE amidohydr 100.0 3E-46 6.4E-51 310.1 14.0 147 1-153 138-284 (452)
10 PRK06170 amidase; Provisional 100.0 1.3E-45 2.8E-50 308.9 15.9 147 1-156 148-302 (490)
11 PRK09201 amidase; Provisional 100.0 7E-46 1.5E-50 308.8 14.2 147 1-153 145-291 (465)
12 PRK05962 amidase; Validated 100.0 8.9E-46 1.9E-50 305.1 14.7 137 1-156 119-255 (424)
13 PRK06828 amidase; Provisional 100.0 1.5E-45 3.2E-50 308.1 15.6 154 1-156 158-316 (491)
14 PRK07487 amidase; Provisional 100.0 1.7E-45 3.7E-50 306.7 15.6 143 1-156 145-292 (469)
15 PRK06061 amidase; Provisional 100.0 2E-45 4.3E-50 307.3 15.7 149 1-156 153-304 (483)
16 PRK07488 indole acetimide hydr 100.0 2.2E-45 4.8E-50 306.3 15.0 136 1-156 146-281 (472)
17 PRK07056 amidase; Provisional 100.0 4.8E-45 1E-49 303.0 14.3 137 1-156 145-285 (454)
18 PRK08186 allophanate hydrolase 100.0 6E-45 1.3E-49 310.3 15.2 147 1-156 140-286 (600)
19 PRK12470 amidase; Provisional 100.0 7.3E-45 1.6E-49 302.5 15.1 143 1-156 144-288 (462)
20 PRK06102 hypothetical protein; 100.0 9.5E-45 2.1E-49 301.1 14.7 137 1-156 143-281 (452)
21 PRK06707 amidase; Provisional 100.0 1.3E-44 2.8E-49 304.7 15.3 151 1-156 215-367 (536)
22 PRK07139 amidase; Provisional 100.0 1.6E-44 3.5E-49 298.7 15.4 142 1-156 109-250 (439)
23 PRK07042 amidase; Provisional 100.0 1.7E-44 3.7E-49 300.5 15.3 146 1-156 144-289 (464)
24 TIGR02713 allophanate_hyd allo 100.0 2.3E-44 4.9E-49 304.5 15.0 147 1-156 103-249 (561)
25 PRK07869 amidase; Provisional 100.0 3.3E-44 7.1E-49 299.0 15.2 145 1-156 146-291 (468)
26 PRK06529 amidase; Provisional 100.0 5.5E-44 1.2E-48 298.6 15.6 149 1-156 136-285 (482)
27 PRK11910 amidase; Provisional 100.0 5.5E-44 1.2E-48 302.3 14.8 134 1-156 307-440 (615)
28 PRK06565 amidase; Validated 100.0 7.9E-44 1.7E-48 299.3 14.7 156 1-156 147-335 (566)
29 PRK08310 amidase; Provisional 100.0 2.3E-43 5.1E-48 288.5 13.9 130 1-154 100-229 (395)
30 PLN02722 indole-3-acetamide am 100.0 3.6E-43 7.7E-48 289.3 13.2 134 1-156 101-235 (422)
31 KOG1211 Amidases [Translation, 100.0 9.1E-40 2E-44 269.3 9.3 152 1-155 155-306 (506)
32 KOG1212 Amidases [Translation, 100.0 3.4E-35 7.4E-40 244.4 11.6 146 1-155 192-344 (560)
33 KOG3095 Transcription initiati 59.2 5.3 0.00012 31.5 1.3 85 46-147 129-218 (284)
34 PF07849 DUF1641: Protein of u 44.1 33 0.00072 18.9 2.7 21 135-155 20-40 (42)
35 COG1049 AcnB Aconitase B [Ener 43.6 10 0.00023 33.4 0.8 36 43-81 383-419 (852)
36 cd06068 H2MP_like-1 Putative [ 32.7 1.1E+02 0.0023 21.4 4.4 31 123-153 111-142 (144)
37 PF06974 DUF1298: Protein of u 32.6 69 0.0015 22.6 3.5 33 121-154 121-153 (153)
38 TIGR00142 hycI hydrogenase mat 32.5 86 0.0019 21.9 4.0 20 134-153 121-140 (146)
39 cd06064 H2MP_F420-Reduc Endope 32.0 79 0.0017 22.2 3.7 21 133-153 128-148 (150)
40 cd06063 H2MP_Cyano-H2up This g 31.3 1.2E+02 0.0027 21.1 4.6 22 132-153 124-145 (146)
41 PF12965 DUF3854: Domain of un 31.2 1.4E+02 0.003 20.7 4.8 35 120-156 69-103 (130)
42 PRK11544 hycI hydrogenase 3 ma 31.1 1.1E+02 0.0023 21.8 4.3 31 124-154 111-142 (156)
43 cd06070 H2MP_like-2 Putative [ 31.0 1.1E+02 0.0023 21.3 4.2 21 133-153 118-138 (140)
44 cd06066 H2MP_NAD-link-bidir En 30.9 1.1E+02 0.0024 21.1 4.3 31 123-153 106-137 (139)
45 TIGR00072 hydrog_prot hydrogen 30.1 1.1E+02 0.0024 21.3 4.2 22 132-153 122-143 (145)
46 COG1654 BirA Biotin operon rep 29.8 53 0.0012 20.9 2.2 15 141-155 33-47 (79)
47 PF14502 HTH_41: Helix-turn-he 29.7 51 0.0011 19.0 1.9 15 142-156 21-35 (48)
48 TIGR00130 frhD coenzyme F420-r 28.1 1E+02 0.0022 21.8 3.7 21 133-153 129-149 (153)
49 COG4917 EutP Ethanolamine util 27.5 1.4E+02 0.003 21.2 4.1 31 120-156 90-120 (148)
50 PF10662 PduV-EutP: Ethanolami 27.5 1.3E+02 0.0028 21.4 4.1 76 65-156 38-120 (143)
51 cd06062 H2MP_MemB-H2up Endopep 27.4 1.3E+02 0.0027 21.0 4.1 22 133-154 124-145 (146)
52 PF13730 HTH_36: Helix-turn-he 26.5 72 0.0016 17.9 2.3 15 141-155 39-53 (55)
53 PRK12359 flavodoxin FldB; Prov 25.9 1.6E+02 0.0035 21.4 4.5 39 117-156 75-113 (172)
54 PF09170 STN1_2: CST, Suppress 25.4 76 0.0017 23.4 2.6 22 135-156 98-119 (174)
55 TIGR00140 hupD hydrogenase exp 25.1 1.3E+02 0.0028 20.5 3.8 20 134-153 109-128 (134)
56 PF08285 DPM3: Dolichol-phosph 24.9 93 0.002 20.3 2.8 19 137-155 70-88 (91)
57 PRK10466 hybD hydrogenase 2 ma 24.5 1.5E+02 0.0033 21.2 4.1 30 124-153 117-147 (164)
58 PF10965 DUF2767: Protein of u 24.5 82 0.0018 19.6 2.3 17 137-153 53-69 (69)
59 COG0488 Uup ATPase components 22.2 2.2E+02 0.0047 24.8 5.2 49 68-133 29-77 (530)
60 PF00325 Crp: Bacterial regula 21.7 1.3E+02 0.0028 15.6 2.4 15 141-155 16-30 (32)
61 TIGR03455 HisG_C-term ATP phos 20.8 1E+02 0.0022 20.4 2.4 16 141-156 73-88 (100)
62 COG3603 Uncharacterized conser 20.0 91 0.002 21.6 2.0 15 141-155 109-123 (128)
No 1
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-49 Score=329.47 Aligned_cols=149 Identities=39% Similarity=0.549 Sum_probs=131.9
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||++|+|||||||||++||+|+++|++|||||||||+||+||||||||||+||||++|++++++++||+|||||||+|
T Consensus 146 NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D 225 (475)
T COG0154 146 NPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRD 225 (475)
T ss_pred CCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCc-ccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDP-ATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~-~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.|+|+.|. .... .+..+ .. ....++++|||++++.....+.+++++++|+++++.|+++|+
T Consensus 226 ~a~l~~v~~g~D~~d~~~~~~----~~~~~--~~-~~~~~~~lrigv~~~~~~~~~~~~~v~~~~~~a~~~l~~~Ga 295 (475)
T COG0154 226 AALLLDVIAGPDPRDSPLPPP----PPVPP--AL-AGKDLKGLRIGVPKELGGGGPLDPDVRAAFEAAVKALEAAGA 295 (475)
T ss_pred HHHHHHHHcCCCCcccccccc----cCccc--hh-hccCCCCcEEEEECcccccCCCcHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999984 2111 11111 12 235678899999988666456788999999999999999996
No 2
>PRK07235 amidase; Provisional
Probab=100.00 E-value=8e-48 Score=322.72 Aligned_cols=152 Identities=36% Similarity=0.489 Sum_probs=133.8
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|+++++||||+|||||+||+||||||||||+|+||+.|++++++++||+|||||+|+|
T Consensus 160 NP~~~~~~~GGSSgGsAAaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~~sld~~Gpmarsv~D 239 (502)
T PRK07235 160 NPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPMTATVRD 239 (502)
T ss_pred CCCCCCCCCCCCcHHHHHHHHcCCCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCcccccCeeeceeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|+|+|+.|+.+...+ +...|.+.+. ..++++||||+++.+.....+++++++++++++.|+++|+
T Consensus 240 ~a~ll~viag~d~~d~~~~~~~---~~~~~~~~l~-~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 311 (502)
T PRK07235 240 NALLLEVIAGRDGLDPRQPAQP---PVDDYTAALD-RGVKGLKIGILREGFGLPNSEPEVDEAVRAAAKRLEDLGA 311 (502)
T ss_pred HHHHHHHHcCCCCCCccccccC---CccchhHHhc-cCCcCCEEEEeccccCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999887654211 1123444333 4578899999876543235789999999999999999985
No 3
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.6e-47 Score=318.25 Aligned_cols=150 Identities=39% Similarity=0.571 Sum_probs=132.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||||+|+|
T Consensus 128 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~~~~d~~Gp~arsv~D 207 (459)
T PRK00012 128 NPWDLERVPGGSSGGSAAAVAAGLAPAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVED 207 (459)
T ss_pred CCCCCCCCCCCCcHHHHHHHHcCCCceEEeeCCCCccchhHHHcCceeecCCCCcccCCCCcCcccCCCcccCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+.. .+...|...+. ..++++||||+++.++ ...++++++++++++++|+++|+
T Consensus 208 ~a~~~~~l~g~d~~d~~~~~----~~~~~~~~~~~-~~~~~lrig~~~~~~~-~~~~~~v~~a~~~a~~~L~~~G~ 277 (459)
T PRK00012 208 AALLLNAIAGHDPKDSTSAD----VPVPDYTAALG-KDIKGLKIGVPKEYFG-EGLDPEVKEAVEAAIKKLEDLGA 277 (459)
T ss_pred HHHHHHHHhCCCCCCccccc----CCCCchhhhhc-ccccccEEEEEccccc-ccCCHHHHHHHHHHHHHHHHCCC
Confidence 99999999999988876532 11112333322 3468899999876543 36789999999999999999985
No 4
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=6e-48 Score=315.43 Aligned_cols=153 Identities=39% Similarity=0.607 Sum_probs=126.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.++|||||||||++||+|+++|+||||+|||||+||+||||||||||+|++|+.|++++++++|++|||||+|+|
T Consensus 120 Np~~~~~~~GGSS~Gsaaavaag~~~~a~GtDtgGSiR~PAa~~Gv~GlkPT~G~vs~~G~~~~~~~~d~~GpmaRsv~D 199 (441)
T PF01425_consen 120 NPWNPSRTPGGSSGGSAAAVAAGFVPLAIGTDTGGSIRIPAAFCGVVGLKPTRGRVSRDGVFPLSPSFDTVGPMARSVED 199 (441)
T ss_dssp BTTBTTBE--SSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEE-STTSS--TTB-CSSTTT-EEEEEESSHHH
T ss_pred CcccccccccccccccccccceecccccccccccccccCchhccccceeccccccccccccccccccccccccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|++++++|+.+...+ .+...+... ....++++||||+.+++.....+++++++++++++.|+++|+
T Consensus 200 l~~~l~vl~g~~~~d~~~~~~~--~~~~~~~~~-~~~~~~~lrIGv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 272 (441)
T PF01425_consen 200 LALLLDVLAGPDPWDPDSLPVP--PPPPDFDAP-LPKSLKGLRIGVPRDDGQWVPVDPEVRRAFEEAAEALEAAGA 272 (441)
T ss_dssp HHHHHHHHBSCBTTBTTSCSTT----SS-CSTT-TTSTTTT-EEEEEGGGG-SSTSSHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHhcCCCccCCCccccc--ccccccccc-ccccccCccccccccccccccccHHHHHHHHHHHHhhccccc
Confidence 9999999999999987664422 112223333 336789999999988662337899999999999999999984
No 5
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=5.6e-47 Score=315.05 Aligned_cols=149 Identities=40% Similarity=0.596 Sum_probs=131.8
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||+|+|
T Consensus 128 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D 207 (460)
T TIGR00132 128 NPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVED 207 (460)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCCeEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCcccCCCcccCeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++++.|+.+.. .|...|...+. ..++++||||+++.+. ..+++++++++++++.|+++|+
T Consensus 208 ~a~~~~~l~g~~~~d~~~~~----~~~~~~~~~~~-~~~~~lrig~~~~~~~--~~~~~v~~a~~~a~~~L~~~G~ 276 (460)
T TIGR00132 208 IALLLDVISGHDKRDSTSAK----VPDPEFFEELK-KDLKGLKVGVVKEFSE--EMDKEVQEKFENALEVLEELGA 276 (460)
T ss_pred HHHHHHHHcCCCCCCCcccC----CCccchhhhhh-cccCCCEEEEECcccc--cCCHHHHHHHHHHHHHHHHCCC
Confidence 99999999999998876543 22223433332 3467899999876443 3689999999999999999985
No 6
>PRK08137 amidase; Provisional
Probab=100.00 E-value=4.9e-47 Score=317.98 Aligned_cols=151 Identities=53% Similarity=0.824 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+||+|++|++++++++|++|||+|+|+|
T Consensus 151 NP~~~~~~~GGSSgGsAaAVAaG~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D 230 (497)
T PRK08137 151 NPYALDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVAD 230 (497)
T ss_pred CCCCCCCCCCcCccHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCcccccCcccCeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+...+ .....|.+.+....++++||||+++ ++ ..+++++++++++++.|+++|+
T Consensus 231 ~a~~l~vl~g~d~~d~~~~~~~--~~~~~~~~~~~~~~~~~lrIgv~~~-~~--~~~~~v~~a~~~a~~~L~~~G~ 301 (497)
T PRK08137 231 AAAVLTAIAGGDPADPATASAP--APAVDYVAALDADALRGARLGVARN-YL--GYHPEVDAQFERALAELKAAGA 301 (497)
T ss_pred HHHHHHHHhCCCCCCcccccCC--CCccchhhhccccccCCCEEEEEch-hc--cCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999997764322 1112243333223468899999865 43 3689999999999999999985
No 7
>PRK07486 amidase; Provisional
Probab=100.00 E-value=1.8e-46 Score=313.63 Aligned_cols=151 Identities=29% Similarity=0.379 Sum_probs=129.8
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCC-CCCCCCcccccccCCHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVI-PITPRQDSVGPICRTVA 79 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~-~~~~~~d~~Gplar~v~ 79 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|+||+.|.. ++++++||+|||||+|+
T Consensus 150 NP~~~~~~pGGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~s~d~~Gp~arsv~ 229 (484)
T PRK07486 150 NPYDPSRSAGGSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQQLGTEGPMGRTVE 229 (484)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCcccccccccccCCeeCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999855 68899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 80 DAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 80 D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
|+++++++|.|+|+.|+.+... +...|...+. ..++++||||+++.+.....+++++++|++++++|+++|+
T Consensus 230 D~a~~~~~l~g~d~~d~~~~~~----~~~~~~~~~~-~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 301 (484)
T PRK07486 230 DVALLLAVQAGYDPRDPLSLAE----DPARFAQPLE-ADLRGKRIAWLGDWGGYLPMEAGVLELCEAALATLRELGC 301 (484)
T ss_pred HHHHHHHHHhCCCCCCCccccC----CCcchhhHhc-cCCCCCEEEEeCcccCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999998765421 1112332222 3467899999865332225789999999999999999985
No 8
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=2.9e-46 Score=311.21 Aligned_cols=149 Identities=31% Similarity=0.409 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|+.|+.++. ++|++|||||+|+|
T Consensus 145 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-~~d~~Gp~arsv~D 223 (466)
T PRK06169 145 NPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-TLAHVGPMTRTVAD 223 (466)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-cccccCCeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998886 89999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++++.|+.+.. .+...|.+.+. ..++++||||++++++. ..++++++++++++++|+++|+
T Consensus 224 ~~~~~~~l~g~~~~d~~~~~----~~~~~~~~~~~-~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~ 293 (466)
T PRK06169 224 AALLLDVIARPDARDWSALP----PPTTSFLDALD-RDVRGLRIAYSPTLGYV-DVDPEVAALVAQAVQRLAALGA 293 (466)
T ss_pred HHHHHHHhcCCCCCCCcccC----CCCcchhhhhc-cCCCCCEEEEECCcCCC-CCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999988876542 12223433322 45688999998765544 6789999999999999999985
No 9
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=3e-46 Score=310.14 Aligned_cols=147 Identities=37% Similarity=0.533 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+||+|+.|++++++++|++|||||+|+|
T Consensus 138 NP~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D 217 (452)
T TIGR02715 138 NPHDLTRIAGGSSGGSAAAVAAGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFVASLDHVGPFARSVED 217 (452)
T ss_pred CCCCCCCCCCcchHHHHHHHHCCCCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCccccCcccCeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
+++++++|.++++.|+.+.. .|...+..... ..++++||||+++ ++....+++++++++++++.|+.
T Consensus 218 ~a~~l~~l~g~~~~d~~~~~----~p~~~~~~~~~-~~~~~lrig~~~~-~~~~~~~~~v~~a~~~a~~~L~~ 284 (452)
T TIGR02715 218 LALAYDVMQGPDPQDPFCTD----RPAEPTVPLLP-AGISGLRIAVLGG-WFQQNADPEALAAVGRVAKALGA 284 (452)
T ss_pred HHHHHHHhcCCCCCCccccc----CCCcchhhhhh-cCCCCCEEEEECc-cccCCCCHHHHHHHHHHHHhcCC
Confidence 99999999999998876542 12222222222 3467899999865 44335789999999999999864
No 10
>PRK06170 amidase; Provisional
Probab=100.00 E-value=1.3e-45 Score=308.94 Aligned_cols=147 Identities=31% Similarity=0.450 Sum_probs=126.1
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCC-----C--CCCCccccc
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIP-----I--TPRQDSVGP 73 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~-----~--~~~~d~~Gp 73 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|+.|+++ + ..++|++||
T Consensus 148 NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp 227 (490)
T PRK06170 148 NPWDLARTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQADLAVAGP 227 (490)
T ss_pred CCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999988 3 346899999
Q ss_pred ccCCHHHHHHHHHHHhCCCCCCccc-ccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042017 74 ICRTVADAAYVLDAIAGFDHYDPAT-RAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLR 152 (156)
Q Consensus 74 lar~v~D~~~~~~~l~g~d~~d~~s-~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~ 152 (156)
|||+|+|+++++++|.|+|+.|+.. ...+ .+. . ....++++||||++++++. ..+++++++|+++++.|+
T Consensus 228 ~arsv~D~a~~l~~l~g~d~~d~~~~~~~~--~~~-----~-~~~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~ 298 (490)
T PRK06170 228 MARSARDLALLLDVMAGPDPLDGGVAYRLA--LPP-----A-RHGRLKDFRVLVLDEHPLL-PTDAAVRAAIERLAAALA 298 (490)
T ss_pred ccCCHHHHHHHHHHHhCCCccccccccccC--CCc-----c-cccccCCCEEEEECCcCCC-CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999887431 1100 111 0 1134678999998875543 678999999999999999
Q ss_pred hCCC
Q 042017 153 LNYA 156 (156)
Q Consensus 153 ~~Ga 156 (156)
++|+
T Consensus 299 ~~G~ 302 (490)
T PRK06170 299 DAGA 302 (490)
T ss_pred HCCC
Confidence 9985
No 11
>PRK09201 amidase; Provisional
Probab=100.00 E-value=7e-46 Score=308.82 Aligned_cols=147 Identities=37% Similarity=0.522 Sum_probs=128.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+||+|+.|++++++++|++|||||+|+|
T Consensus 145 NP~~~~~~pGGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D 224 (465)
T PRK09201 145 NPHDLTRIAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVAD 224 (465)
T ss_pred CCCCCCCCCCcchHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCcccccCcccCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
+++++++|.++|+.|+.+... |...|..... ..++++||||+.+. +....+++++++++++++.|+.
T Consensus 225 ~a~~l~~l~g~d~~d~~~~~~----~~~~~~~~~~-~~~~~lrig~~~~~-~~~~~~~~v~~a~~~a~~~L~~ 291 (465)
T PRK09201 225 LALVYDVLQGPDPQDPFQADR----PAEPTAPLLD-RGAEGLRIAVLGGY-FAQWADPEARAAVDRVAKALGA 291 (465)
T ss_pred HHHHHHHhcCCCCCCcccccC----CCcchhhhhc-cCCCCCEEEEECcc-ccCCCCHHHHHHHHHHHHHccC
Confidence 999999999999888765431 2212222222 34678999998654 4336789999999999999864
No 12
>PRK05962 amidase; Validated
Probab=100.00 E-value=8.9e-46 Score=305.14 Aligned_cols=137 Identities=34% Similarity=0.504 Sum_probs=124.6
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+|++|+.|++++++++|++|||||+|+|
T Consensus 119 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~GlKPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D 198 (424)
T PRK05962 119 NAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVAD 198 (424)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCCcchhhhHhhCceeeecCCCceeCCCcccCccccCccccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++++.++.. ..++++|||++.++++. ..++++++++++++++|+++|+
T Consensus 199 ~~~~~~vl~g~~~~~~~~------------------~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~ 255 (424)
T PRK05962 199 CAAADAVMAGEKPIPLEV------------------LPVAGLRIGLPKGYLLA-DMEPDVAAAFEASLAALEKAGA 255 (424)
T ss_pred HHHHHHHHcCCCCCcccc------------------cCcCCcEEEEEcccccc-cCCHHHHHHHHHHHHHHHHCCC
Confidence 999999999987654210 12467999998765443 6789999999999999999885
No 13
>PRK06828 amidase; Provisional
Probab=100.00 E-value=1.5e-45 Score=308.15 Aligned_cols=154 Identities=45% Similarity=0.713 Sum_probs=130.9
Q ss_pred CCCCC---CCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCC
Q 042017 1 NPYVL---SADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRT 77 (156)
Q Consensus 1 Np~~~---~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~ 77 (156)
||||+ .|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|++|+++++|++|||||+
T Consensus 158 NP~d~~~~~r~pGGSSgGsAaaVAag~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~s~d~~Gp~ars 237 (491)
T PRK06828 158 NPYGTGEDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFART 237 (491)
T ss_pred CCCCCccCCcCCCcCchHHHHHHHcCCCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCccCCCeeccccCC
Confidence 99999 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCC--CCCCCCHHHHHHHHHHHHHHHhCC
Q 042017 78 VADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPF--FNFDEGSPLAQVFDHHLHTLRLNY 155 (156)
Q Consensus 78 v~D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~--~~~~~~~~v~~~~~~ai~~L~~~G 155 (156)
|+|+++++++|.|+|+.|+.+...+. .....|...+....++++||||+++++ +. ..+++++++|+++++.|+++|
T Consensus 238 v~D~a~~~~~l~g~d~~d~~~~~~~~-~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G 315 (491)
T PRK06828 238 VTDAAILLGSLTGVDEKDVVTHKSEG-IAEHDYTKYLDANGLNGAKIGVYNNAPKEYY-ESGEYDEKLFKETIEVLRSEG 315 (491)
T ss_pred HHHHHHHHHHHhCCCccCccccccCc-CCCCchhhhhccccCCCCEEEEEcCcccccc-CCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998876542110 011123333222357889999976421 22 478999999999999999998
Q ss_pred C
Q 042017 156 A 156 (156)
Q Consensus 156 a 156 (156)
+
T Consensus 316 ~ 316 (491)
T PRK06828 316 A 316 (491)
T ss_pred C
Confidence 5
No 14
>PRK07487 amidase; Provisional
Probab=100.00 E-value=1.7e-45 Score=306.75 Aligned_cols=143 Identities=33% Similarity=0.404 Sum_probs=125.9
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCC----C-CCCCccccccc
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIP----I-TPRQDSVGPIC 75 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~----~-~~~~d~~Gpla 75 (156)
||||+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+|++|++|+++ + .+.+|++||||
T Consensus 145 NP~d~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gpla 224 (469)
T PRK07487 145 NPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLA 224 (469)
T ss_pred CCCCCCCCCCcchHHHHHHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCee
Confidence 999999999999999999999999999999999999999999999999999999999999863 3 34789999999
Q ss_pred CCHHHHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Q 042017 76 RTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNY 155 (156)
Q Consensus 76 r~v~D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~G 155 (156)
|+|+|+++++++|.++|+.|+.+... + + ....+++|||++.+.++ ...+++++++|++++++|+++|
T Consensus 225 rsv~D~a~~~~~l~g~d~~d~~~~~~----~---~-----~~~~~~lrig~~~~~~~-~~~~~~v~~a~~~a~~~L~~~G 291 (469)
T PRK07487 225 RTVADLRLALAAMAAPDPRDPWWVPA----P---L-----EGPPRPKRVALCVRPDG-LDVDPEVEAALRDAARRLEDAG 291 (469)
T ss_pred CCHHHHHHHHHHHhCCCCCCCccCCC----C---c-----cCCCCCcEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999888765321 1 1 12357899999876554 3679999999999999999998
Q ss_pred C
Q 042017 156 A 156 (156)
Q Consensus 156 a 156 (156)
+
T Consensus 292 ~ 292 (469)
T PRK07487 292 W 292 (469)
T ss_pred C
Confidence 5
No 15
>PRK06061 amidase; Provisional
Probab=100.00 E-value=2e-45 Score=307.30 Aligned_cols=149 Identities=28% Similarity=0.319 Sum_probs=129.1
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|+.|+.++.+++|++|||||+|+|
T Consensus 153 NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~d~~Gp~arsv~D 232 (483)
T PRK06061 153 NPWSRDHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVAD 232 (483)
T ss_pred CCCCCCCCCCCChHHHHHHHHcCCCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCcccccCceeCCEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFF---NFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~---~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+... +. +..... ...+++||||+.++.+ ....+++++++++++++.|+++|+
T Consensus 233 ~a~~~~~l~g~d~~d~~~~~~----~~--~~~~~~-~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~ 304 (483)
T PRK06061 233 AALLLDAASGNHPGDRHRPPP----VT--VSDAVG-RAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALLGH 304 (483)
T ss_pred HHHHHHHHhCCCCCCCcccCC----cc--chhhhc-cCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHCCC
Confidence 999999999999988764211 10 111111 3457899999876432 235789999999999999999885
No 16
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=2.2e-45 Score=306.35 Aligned_cols=136 Identities=41% Similarity=0.603 Sum_probs=125.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.++|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|++|+++++|++|||||+|+|
T Consensus 146 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~~~~d~~Gp~arsv~D 225 (472)
T PRK07488 146 NPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVAD 225 (472)
T ss_pred CCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCcccccccCCcccCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.|+|+.++ + ..++++||||++++++. ..+++++++++++++.|+++|+
T Consensus 226 ~a~~~~vl~g~d~~~~---------~----------~~~~~lrig~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~ 281 (472)
T PRK07488 226 LALLDAVITGDAALPA---------P----------VALAGLRLGVPAAPFWD-GLDPDVAAVAEAALAKLAAAGV 281 (472)
T ss_pred HHHHHHHhcCCCCCCC---------C----------cCcCCCEEEEEcchhcc-CCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999876431 0 23578999998765554 5789999999999999999985
No 17
>PRK07056 amidase; Provisional
Probab=100.00 E-value=4.8e-45 Score=303.02 Aligned_cols=137 Identities=36% Similarity=0.516 Sum_probs=125.1
Q ss_pred CCC----CCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccC
Q 042017 1 NPY----VLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICR 76 (156)
Q Consensus 1 Np~----~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar 76 (156)
||| |+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+|++|++|++++++++|++|||||
T Consensus 145 NP~~~~~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~~~d~~Gp~ar 224 (454)
T PRK07056 145 NPWRRDVGDGRIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLAR 224 (454)
T ss_pred CCCCCCCCCCcCCCCcchHHHHHHHcCCCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCccccCcccCccC
Confidence 999 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 77 TVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 77 ~v~D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+|+|+++++++|.++|+.|+.. ..++++||||+++.++ ...+++++++++++++.|+++|+
T Consensus 225 sv~D~a~~~~vl~g~d~~d~~~------------------~~~~~lrig~~~~~~~-~~~~~~v~~~~~~a~~~L~~~G~ 285 (454)
T PRK07056 225 SVACCALVDAVLAGEEPVVPAA------------------RPLEGLRLAVPTTVVL-DGLDATVAAAFERALKRLSAAGA 285 (454)
T ss_pred CHHHHHHHHHHhcCCCCCCccc------------------ccccCcEEEEcchhhc-cCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999998776421 1246799999875433 35789999999999999999885
No 18
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=6e-45 Score=310.29 Aligned_cols=147 Identities=39% Similarity=0.506 Sum_probs=129.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|++||||||||++||+|+++|+|||||+||||+||+||||||||||+|++|++|++|+++++||+|||||+++|
T Consensus 140 NP~~~~~~~GGSSsGSAaAVAaG~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vGp~Arsv~D 219 (600)
T PRK08186 140 NAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDD 219 (600)
T ss_pred CCCCCCCCCCCCcHHHHHHHHcCCcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCcccccccCCceecccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+++... |. .+. ....+++||||+..+.+....+++++++|++++++|+++|+
T Consensus 220 ~~~~l~vl~g~d~~D~~s~~~----p~-~~~----~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 286 (600)
T PRK08186 220 ADAVLAVMAGFDPADPYSRAN----PA-DAP----AALPAGPRVGVPRAAQLEFFGDAEAEAAFAAALARLEALGA 286 (600)
T ss_pred HHHHHHHhcCCCCCCcccccC----Cc-ccc----cccCCCCEEEEEcchhccccCCHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998876432 11 010 12346799999864333323578999999999999999985
No 19
>PRK12470 amidase; Provisional
Probab=100.00 E-value=7.3e-45 Score=302.46 Aligned_cols=143 Identities=29% Similarity=0.283 Sum_probs=124.5
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|++++++++|++|||+|+|+|
T Consensus 144 NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~ld~~Gp~ar~v~D 223 (462)
T PRK12470 144 NPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMD 223 (462)
T ss_pred CCCCCCCCCCcchhHHHHHHHcCCCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCcccCccccCCeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCC--CCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPF--FNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~--~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.+.+..+. .|..... ...+++||||+.+.+ +....+++++++++++++.|+++|+
T Consensus 224 ~a~~~~vl~~~~~~~~------------~~~~~~~-~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 288 (462)
T PRK12470 224 AALLLDATTTVPGPEG------------EFVAAAA-REPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGH 288 (462)
T ss_pred HHHHHHHhcCCCCCCc------------chhhhhc-cCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999998654331 1211111 234679999987533 1236789999999999999999985
No 20
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-45 Score=301.12 Aligned_cols=137 Identities=38% Similarity=0.558 Sum_probs=123.4
Q ss_pred CCCCC--CCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCH
Q 042017 1 NPYVL--SADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTV 78 (156)
Q Consensus 1 Np~~~--~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v 78 (156)
||||+ .|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|++|+++++|++|||||+|
T Consensus 143 NP~~~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~s~d~~Gp~arsv 222 (452)
T PRK06102 143 NPRSTDVPRIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSV 222 (452)
T ss_pred CCCCCCCCcCCCCCcHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCcccccccCcccCccCCH
Confidence 99986 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 79 ADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 79 ~D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+|+++++++|.+.++.|.. ...++++||++.++.++ ...+++++++|++++++|+++|+
T Consensus 223 ~D~a~~~~~l~g~~~~~~~------------------~~~~~~~ri~~~~~~~~-~~~~~~v~~~~~~a~~~L~~~G~ 281 (452)
T PRK06102 223 RDAVWIDAAMRGLTAPDVV------------------RRPLAGLRLVVPETVVF-DDAEPGVRAAFEAAVERLQAAGA 281 (452)
T ss_pred HHHHHHHHHHcCCCCcccc------------------ccCCCCCEEEEecchhc-ccCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999998654321 02346789999766443 36789999999999999999985
No 21
>PRK06707 amidase; Provisional
Probab=100.00 E-value=1.3e-44 Score=304.66 Aligned_cols=151 Identities=41% Similarity=0.626 Sum_probs=130.9
Q ss_pred CCCCC-CCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHH
Q 042017 1 NPYVL-SADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVA 79 (156)
Q Consensus 1 Np~~~-~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~ 79 (156)
||||+ .++|||||||||++||+|+++++|||||+||||+||++|||||||||+|++|++|++|+++++||+|||+|+|+
T Consensus 215 NP~~~~~~~pGGSSsGSAaAVAag~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~slDt~Gp~artV~ 294 (536)
T PRK06707 215 NPYGPIKFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVK 294 (536)
T ss_pred CCCCcccCCCCCCCchHHHHHhCCCCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCcccccCeecCeeCCHH
Confidence 99999 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHH-HHHHHHHHHhCCC
Q 042017 80 DAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQV-FDHHLHTLRLNYA 156 (156)
Q Consensus 80 D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~-~~~ai~~L~~~Ga 156 (156)
|+++++++|.|.|+.|+.+...+ ..+...|...+....++++|||++... ..+++++++ ++++++.|+++|+
T Consensus 295 D~a~~l~~~~g~d~~d~~~~~~~-~~~~~~~~~~l~~~~l~~~rigv~~~~----~~~~~~~~a~~~~a~~~L~~~Ga 367 (536)
T PRK06707 295 DAATLFNAMIGYDEKDVMTEKVK-DKERIDYTKDLSIDGLKGKKIGLLFSV----DQQDENRKAVAEKIRKDLQDAGA 367 (536)
T ss_pred HHHHHHHHHcCCCCCcccccccc-ccCCcchhhhccccCCCCCEEEEECCc----CCCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999997764322 112234544443346889999998753 245778888 6999999999996
No 22
>PRK07139 amidase; Provisional
Probab=100.00 E-value=1.6e-44 Score=298.74 Aligned_cols=142 Identities=26% Similarity=0.340 Sum_probs=125.7
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||++ +++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||||+|+|
T Consensus 109 NP~~~~~~pGGSSgGSAAaVAag-~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D 187 (439)
T PRK07139 109 NPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVND 187 (439)
T ss_pred CCCCCCCCCCCCchHHHHHHHCC-CCEEEEcCCCcchhhhHHHcCeEEEeCCCCCcCCCCcccCcccCCccccccCCHHH
Confidence 99999999999999999999987 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+... +. .. ...++++||||.+. +. .++++++++++++++.|+++|+
T Consensus 188 ~a~~~~vl~g~d~~d~~~~~~----~~---~~---~~~~~~lrig~~~~--~~-~~~~~v~~a~~~a~~~L~~~G~ 250 (439)
T PRK07139 188 AIILSKVLFGKDENDLTSVDV----KI---NN---VKKTKPKKVAYLDC--FK-ELEEYVAKKYKKLINILKSENI 250 (439)
T ss_pred HHHHHHHHcCCCcCCcccccc----Cc---cc---ccccCCCEEEEECc--cc-cCCHHHHHHHHHHHHHHHHCCC
Confidence 999999999999888766421 11 11 12357799999643 22 5789999999999999999985
No 23
>PRK07042 amidase; Provisional
Probab=100.00 E-value=1.7e-44 Score=300.47 Aligned_cols=146 Identities=26% Similarity=0.414 Sum_probs=125.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+||||+.|.. ++|++|||||+|+|
T Consensus 144 NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~----~~d~~Gp~arsv~D 219 (464)
T PRK07042 144 NPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY----TGRCAGPMTRTVDD 219 (464)
T ss_pred CCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc----cccccCCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999998843 35899999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+... +...|.. .. ..++++||||+.++++....+++++++|++++++|+++|+
T Consensus 220 ~a~~l~vl~g~d~~d~~~~~~----~~~~~~~-~~-~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 289 (464)
T PRK07042 220 AALLMSVLSRPDARDGTSLPP----QDIDWSD-LD-IDVRGLRIGLMLDAGCGLAVDPEVRAAVEAAARRFEAAGA 289 (464)
T ss_pred HHHHHHHhcCCCCCCccccCC----CCcChhh-hc-cCcCCCEEEEECcccCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 999999999999998765421 1112321 12 3467899999876544335789999999999999999985
No 24
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=2.3e-44 Score=304.49 Aligned_cols=147 Identities=37% Similarity=0.451 Sum_probs=128.1
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|++||||||||++||+|+++|++|||||||||+||+||||||||||+|++|+.|++|+++++||+|||||+|+|
T Consensus 103 NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vG~~Arsv~D 182 (561)
T TIGR02713 103 NAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGLKPTKGLVSTTGVVPACRSLDCVSIFALTVAD 182 (561)
T ss_pred CCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeEecCCCCccCCCccccccCCCeeechhCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.++|+.|+.+... |. . ... ...+++||||+..+.+....+++++++|++++++|+++|+
T Consensus 183 ~~~~l~v~~g~d~~d~~s~~~----p~---~-~~~-~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~ 249 (561)
T TIGR02713 183 AEQVLRIAAAPDARDPYSRPL----PA---A-ALR-RLPPPPRVGVPRAAQLEFFGDSQAEAAFAAAVERLEALGV 249 (561)
T ss_pred HHHHHHhhcCCCCcCccccCC----Cc---h-hhc-ccCCCCEEEEECchhcCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999876432 11 0 011 2236799999874322223478999999999999999985
No 25
>PRK07869 amidase; Provisional
Probab=100.00 E-value=3.3e-44 Score=299.04 Aligned_cols=145 Identities=22% Similarity=0.240 Sum_probs=123.2
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCC-CCCCcccccccCCHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPI-TPRQDSVGPICRTVA 79 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~-~~~~d~~Gplar~v~ 79 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|++|++|+.+. ..++|++|||||+|+
T Consensus 146 NP~d~~~~pGGSSgGsAaAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~~d~~Gp~arsv~ 225 (468)
T PRK07869 146 NPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPVNIVANGVLTRTVR 225 (468)
T ss_pred CCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCccccceecCeeCcHH
Confidence 9999999999999999999999999999999999999999999999999999999999998774 346899999999999
Q ss_pred HHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 80 DAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 80 D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
|+++++++|.+.++.+... +. .+. ....++++||||++++++....++++++++++++++|+++|+
T Consensus 226 D~a~l~~v~~g~~~~~~~~-------~~-~~~---~~~~~~~lrigv~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~ 291 (468)
T PRK07869 226 DTAAFYREAERYYRNPKLP-------PI-GDV---TGPGKQRLRIAVVTDSVTGREADPEVREAVLATARLLEELGH 291 (468)
T ss_pred HHHHHHHHHhccCccCCCC-------ch-hhh---cccCCCCCEEEEECCccCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 9999999999987543211 00 000 112357899999876554236789999999999999999985
No 26
>PRK06529 amidase; Provisional
Probab=100.00 E-value=5.5e-44 Score=298.59 Aligned_cols=149 Identities=20% Similarity=0.189 Sum_probs=124.3
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCccc-ccccCCHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSV-GPICRTVA 79 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~-Gplar~v~ 79 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+||||+.+..+.+++.+++ |||||+|+
T Consensus 136 NP~~~~~~~GGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~~~~~~~~Gpiarsv~ 215 (482)
T PRK06529 136 LPFDNSRNAGGSSGGAAALVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRGWQGASVHFALTKSVR 215 (482)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCccccccccccCCccCcHH
Confidence 99999999999999999999999999999999999999999999999999999999987765556666765 79999999
Q ss_pred HHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 80 DAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 80 D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
|+++++++|.++++.|+.+.... +...+. ...++++||||+.++++....+++++++|++++++|+++|+
T Consensus 216 D~a~~l~~~~g~~~~~~~~~~~~---~~~~~~----~~~~~~lrIg~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~ 285 (482)
T PRK06529 216 DTRRLLYYLQMYQMESPFPLATL---SKESLF----QSLQRPLKIAFYQRSPDGSPVSLDAAKALKQAVTFLREQGH 285 (482)
T ss_pred HHHHHHHHhhCCCCCCCcccCCc---ccchhc----cccCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 99999999999988776543110 000011 11247799999876544336789999999999999999985
No 27
>PRK11910 amidase; Provisional
Probab=100.00 E-value=5.5e-44 Score=302.31 Aligned_cols=134 Identities=40% Similarity=0.659 Sum_probs=122.0
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++||||+||||+||+||||||||||+|++|+.|++|+++++|++|||||+|+|
T Consensus 307 NP~~~~r~pGGSSsGSAAAVAaG~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~slDtvGPmaRsV~D 386 (615)
T PRK11910 307 NPYSSNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVND 386 (615)
T ss_pred CCCCCCCCCCCCCchHHHHHhcCCceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCcCCCCeeccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.+.+..++. ....++++||||++. ..++++.++++++++.|+++|+
T Consensus 387 ~a~ll~vi~g~~~~~~l-----------------~~~~lkglRIGv~~~-----~~~~~v~~a~~~a~~~L~~~Ga 440 (615)
T PRK11910 387 AYLTTNALTNTTSNPPL-----------------STDALKGKRIGLLAD-----GESNEETAVIKKIKLDLQKAGA 440 (615)
T ss_pred HHHHHHHhcCCCCcCcc-----------------CcccCCCCEEEEECC-----CCCHHHHHHHHHHHHHHHHCCC
Confidence 99999999987653321 113568899999864 2357899999999999999986
No 28
>PRK06565 amidase; Validated
Probab=100.00 E-value=7.9e-44 Score=299.33 Aligned_cols=156 Identities=29% Similarity=0.353 Sum_probs=130.9
Q ss_pred CCCCCCC----CCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccC
Q 042017 1 NPYVLSA----DPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICR 76 (156)
Q Consensus 1 Np~~~~~----~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar 76 (156)
||||+.+ +|||||||||++||+|+++|++||||+||||+||+||||||||||+|++|++|++|+++++|++|||+|
T Consensus 147 NP~n~~~~~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~s~D~vGp~aR 226 (566)
T PRK06565 147 SPYNAAYLTAPFASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYAR 226 (566)
T ss_pred CCcCcccCcCCCCCCCCccHHHHHhCCCCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCcccccCCCCeecceeC
Confidence 9999999 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCcccc--c-----c--cccCCCCcccccc-cCCCCCCCEEEEeCCCCCCC------------
Q 042017 77 TVADAAYVLDAIAGFDHYDPATR--A-----A--SEYIPRGGYKQFL-RPHGLKGKRLGIVRNPFFNF------------ 134 (156)
Q Consensus 77 ~v~D~~~~~~~l~g~d~~d~~s~--~-----~--~~~~p~~~~~~~~-~~~~l~~lrIg~~~~~~~~~------------ 134 (156)
+|+|+++++++|.|.|+.|..+. . . ....++..|.+.+ ....++++|||+++..++..
T Consensus 227 sV~D~a~~l~vl~g~D~~d~~~~~~~~~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~ 306 (566)
T PRK06565 227 TMADLLEVLDVIVADDPDTRGDLWRLQPWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIG 306 (566)
T ss_pred CHHHHHHHHHHhcCCCcccccchhhccccccCccccccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccc
Confidence 99999999999999998875421 0 0 0111222354432 12568899999987643321
Q ss_pred -------CCCHHHHHHHHHHHHHHHhCCC
Q 042017 135 -------DEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 135 -------~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
.+++++.++|++++++|+++||
T Consensus 307 ~~~~~~~~~~~~v~~~~~~a~~~L~~~Ga 335 (566)
T PRK06565 307 GPTGQRIHTRPSVIDLWEAARRALEAAGA 335 (566)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHCCC
Confidence 1468999999999999999996
No 29
>PRK08310 amidase; Provisional
Probab=100.00 E-value=2.3e-43 Score=288.50 Aligned_cols=130 Identities=36% Similarity=0.471 Sum_probs=119.3
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||+|||||+||+||||||||||+||+|++|+.++++++|++|||||+++|
T Consensus 100 NP~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~~~d~~Gp~arsv~D 179 (395)
T PRK08310 100 NPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLAPSFDTVGWFARDIAL 179 (395)
T ss_pred CCCCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcCeeEeecCCCcccCCCCcccccCCCeeeeeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLN 154 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~ 154 (156)
+++++++|.+.++.++. ..+||++..+ ++. ..++++++++++++++|+++
T Consensus 180 ~~~~~~~l~g~~~~~~~----------------------~~~ri~~~~~-~~~-~~~~~v~~a~~~a~~~L~~~ 229 (395)
T PRK08310 180 LERVGEVLLGDDAQEFP----------------------LTQRLLIPVD-LFA-LLDPAVRAALEAALARLRPH 229 (395)
T ss_pred HHHHHHHHcCCCcccCC----------------------cCceEEEecc-ccc-cCCHHHHHHHHHHHHHHHHh
Confidence 99999999998765420 2368999654 443 57899999999999999985
No 30
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=3.6e-43 Score=289.31 Aligned_cols=134 Identities=32% Similarity=0.396 Sum_probs=119.9
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
||||+.|+|||||||||++||+|++++++|||||||||+||+||||||||||+|+||++|++|+++++||+|||||+|+|
T Consensus 101 NP~~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~KPT~G~vp~~G~~pla~sld~~G~~ar~v~D 180 (422)
T PLN02722 101 NPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQSFDTVGWFARDPVI 180 (422)
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcceEEEecCCCccCCCCCCcccCCCCcccceeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCC-CCCCHHHHHHHHHHHHHHHhCCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFN-FDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~-~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+++++++|.+.+..|+ ...+||++..+.+.. ...++++.+.++++++.|+++|+
T Consensus 181 ~a~~~~~l~g~~~~d~----------------------~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 235 (422)
T PLN02722 181 LKRVGHVLLQQPDVNP----------------------IKPSQIIIAEDCFQLSSIPHDRLVQVLVKSVEKLFGGGD 235 (422)
T ss_pred HHHHHHHHcCCCCCCC----------------------cCCceEEechhhhhhcccccHHHHHHHHHHHHHHhcCCC
Confidence 9999999999876552 124799997653321 23458899999999999888763
No 31
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.1e-40 Score=269.32 Aligned_cols=152 Identities=39% Similarity=0.483 Sum_probs=133.3
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCCCcccccccCCHHH
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRTVAD 80 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~v~D 80 (156)
|||++.+.|||||+|||++||+++|+|++|||||||+|+||+||||+|||||+|++|+.|++|++.++|++|++||+|.|
T Consensus 155 np~~~~~v~GGSS~GSA~aVaa~l~~~alGtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~~SlD~vGi~a~tv~D 234 (506)
T KOG1211|consen 155 NPLSLWRVPGGSSSGSAAAVAAGLCDFALGTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYD 234 (506)
T ss_pred CCCcccccCCCCcchhHHHHHhccchhhccccCCCCccCcHHhcCccccccCcceecccccchhhhcccccchhhcccch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Q 042017 81 AAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNY 155 (156)
Q Consensus 81 ~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~G 155 (156)
+..+++++.+.|..|.++...+.+ ...........+++++|||++++ +.....+.++.+.|++..++|...|
T Consensus 235 ~~~v~~~~~g~d~~d~~t~~~p~~--~~~~~~~~~~~~l~~~r~GIp~~-~~~~~~~~~v~~~~~~~~~~l~~~~ 306 (506)
T KOG1211|consen 235 AVEVLGAIVGIDELDSTTLAQPAP--FPIVLELIGSMDLSGLRIGIPKE-RLVQGLSSGVLSLWEELADLLGSLG 306 (506)
T ss_pred hHHHhhhhcCCCccCcccccCCcc--cccchhhcccccccccccCceee-cccccccHHHHHHHHHHHHHhhccc
Confidence 999999999999999888764421 11122233334788999999887 4444677899999999999998665
No 32
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-35 Score=244.35 Aligned_cols=146 Identities=27% Similarity=0.386 Sum_probs=123.6
Q ss_pred CCCCCCCCCCCCChHHHHHHhcCCCceeeeccCCCccchhhhcCCcceecCCCCCccCCCCCCCCCC----CcccccccC
Q 042017 1 NPYVLSADPCGSSSGSAISVAANLAAVSLGTETDGSILCPSSSNSVVGLKPTLGLTSRAGVIPITPR----QDSVGPICR 76 (156)
Q Consensus 1 Np~~~~~~~gGSS~Gsaaava~g~~~~aiGtD~gGSiR~PA~~~Gv~g~kpt~g~~s~~G~~~~~~~----~d~~Gplar 76 (156)
||||.+|+|||||||+|+++++|.++||||||+|||||+||+|||++|+|||.+|+|..|..+..+. +-++|||+|
T Consensus 192 NP~d~~rt~GGSSGGEaALigaggS~lGiGsDigGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r 271 (560)
T KOG1212|consen 192 NPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDIGGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTR 271 (560)
T ss_pred ChhhccCCCCCCchHHHHHHhCCcceeccccccCCceeechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999887553 347999999
Q ss_pred CHHHHHHHHHHHhCCC-CC--CcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 042017 77 TVADAAYVLDAIAGFD-HY--DPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 77 ~v~D~~~~~~~l~g~d-~~--d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
+++|+.++++.+++.. .+ |+.. ++..+..... ..-++++||++.++.+. +..|.+++++.++++.|++
T Consensus 272 ~v~dl~~~L~~~i~~~~~~~~~p~~-------~p~~~~~~~y-~~~~~~~ig~~~~dg~~-~~~pa~~RAv~~~~~~l~~ 342 (560)
T KOG1212|consen 272 DVEDLVLLLRLMIGDSGPKLLDPYP-------VPVKFMEVFY-KSSDKLVIGYYVDDGFF-DPSPAMQRAVQETIDLLEK 342 (560)
T ss_pred cHHHHHHHHHHhcCCccccccCCCC-------CCchhhhhhh-hccCCccceEEecCCCC-CcCHHHHHHHHHHHHHHHh
Confidence 9999999999999966 22 2222 2222333333 34467999998777777 5578999999999999998
Q ss_pred CC
Q 042017 154 NY 155 (156)
Q Consensus 154 ~G 155 (156)
.|
T Consensus 343 ~g 344 (560)
T KOG1212|consen 343 AG 344 (560)
T ss_pred cC
Confidence 76
No 33
>KOG3095 consensus Transcription initiation factor IIE, beta subunit [Transcription]
Probab=59.16 E-value=5.3 Score=31.55 Aligned_cols=85 Identities=11% Similarity=0.171 Sum_probs=49.1
Q ss_pred cceecCCCCCccCCCCCCCCCCCcc-cccccCCHHHHH----HHHHHHhCCCCCCcccccccccCCCCcccccccCCCCC
Q 042017 46 VVGLKPTLGLTSRAGVIPITPRQDS-VGPICRTVADAA----YVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLK 120 (156)
Q Consensus 46 v~g~kpt~g~~s~~G~~~~~~~~d~-~Gplar~v~D~~----~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~ 120 (156)
-|.|||+|..=+...++.+....++ .|+...++.|+- ..++.+--.... -+.... .+ .
T Consensus 129 ~FsfKp~y~Ird~~~Ll~llr~~~~~~GI~v~DL~d~~pNv~~~lk~L~~s~eI--------------l~l~t~--~d-~ 191 (284)
T KOG3095|consen 129 TFSFKPTYNIRDKKQLLKLLRKHDTLGGILVSDLKDAWPNVDEDLKELEKSGEI--------------LVLRTP--KD-D 191 (284)
T ss_pred eeeccCccccCCHHHHHHHHHhcCccCceehHHhhhcccchHHHHHHHhcCCcE--------------EEEecc--CC-C
Confidence 5789999987776666666555554 566666666642 222222111000 011110 11 4
Q ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHH
Q 042017 121 GKRLGIVRNPFFNFDEGSPLAQVFDHH 147 (156)
Q Consensus 121 ~lrIg~~~~~~~~~~~~~~v~~~~~~a 147 (156)
+.||.|+-+..+...+++|++..|++.
T Consensus 192 k~kivf~ND~~~~~~VDdEFk~LWr~V 218 (284)
T KOG3095|consen 192 KPKIVFYNDKSCSFSVDDEFKKLWRSV 218 (284)
T ss_pred CCceEEecCCCCCcccCHHHHHHHHhC
Confidence 578888665455558899999888776
No 34
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=44.10 E-value=33 Score=18.92 Aligned_cols=21 Identities=10% Similarity=-0.067 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHHHHHHHHhCC
Q 042017 135 DEGSPLAQVFDHHLHTLRLNY 155 (156)
Q Consensus 135 ~~~~~v~~~~~~ai~~L~~~G 155 (156)
--+|+|++.+.-.+..|+..|
T Consensus 20 l~DpdvqrgL~~ll~~lk~lG 40 (42)
T PF07849_consen 20 LRDPDVQRGLGFLLAFLKALG 40 (42)
T ss_pred HcCHHHHHHHHHHHHHHHHHc
Confidence 347999999999999998876
No 35
>COG1049 AcnB Aconitase B [Energy production and conversion]
Probab=43.58 E-value=10 Score=33.41 Aligned_cols=36 Identities=25% Similarity=0.433 Sum_probs=24.3
Q ss_pred cCCcceecCCCCCccCCCCCCCCCCCcccccccCC-HHHH
Q 042017 43 SNSVVGLKPTLGLTSRAGVIPITPRQDSVGPICRT-VADA 81 (156)
Q Consensus 43 ~~Gv~g~kpt~g~~s~~G~~~~~~~~d~~Gplar~-v~D~ 81 (156)
.|||-|++|-.-.=| .+-..-++||.|||+|+ ++|+
T Consensus 383 AcGv~girpGtycep---kmttVGSQDTTGpMTrdElk~l 419 (852)
T COG1049 383 ACGVPGIRPGTYCEP---KMTTVGSQDTTGPMTRDELKDL 419 (852)
T ss_pred ccCCccccCCCcccc---eeeeeccccCCCCccHHHHHHH
Confidence 488888887654333 23344589999999996 3444
No 36
>cd06068 H2MP_like-1 Putative [NiFe] hydrogenase-specific C-terminal protease. Sequence comparison shows similarity to hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing and assembly with other subunits. Hydrogenase maturation endopeptidases are responsible for the proteolytic processing, liberating a short C-terminal peptide by cleaving after a His or an Arg residue, e.g., HycI (E. coli) is involved in processing of HypE (the large subunit of hydrogenases 3). This cleavage is nickel dependent.
Probab=32.71 E-value=1.1e+02 Score=21.39 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=22.1
Q ss_pred EEEEeCCC-CCCCCCCHHHHHHHHHHHHHHHh
Q 042017 123 RLGIVRNP-FFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 123 rIg~~~~~-~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
-||+-.+. .+....+++++++++++++++++
T Consensus 111 lvgi~~~~~~~g~~LS~~v~~a~~~~~~~i~~ 142 (144)
T cd06068 111 VVGCEPADVDEGIGLSEPVAAAVPEAVRLVRD 142 (144)
T ss_pred EEEEEecccCCCCCcCHHHHHHHHHHHHHHHH
Confidence 34553322 22357899999999999999875
No 37
>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=32.60 E-value=69 Score=22.61 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=24.0
Q ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhC
Q 042017 121 GKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLN 154 (156)
Q Consensus 121 ~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~ 154 (156)
.+.||+.-+.... ++...+.+.++++++.|+++
T Consensus 121 ~l~~gi~ad~~~v-pD~~~l~~~~~~~l~eL~~A 153 (153)
T PF06974_consen 121 KLDFGIVADRDAV-PDPQRLADCFEEALEELKEA 153 (153)
T ss_pred EEEEEEEEccccC-CCHHHHHHHHHHHHHHHHcC
Confidence 4678886654433 55566789999999999875
No 38
>TIGR00142 hycI hydrogenase maturation protease HycI. Hydrogenase maturation protease is a protease that is involved in the C-terminal processing of HycE,the large subunit of hydrogenase 3 from E.Coli. This protein seems to be found in E.Coli and in Archaea.
Probab=32.50 E-value=86 Score=21.93 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 042017 134 FDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 134 ~~~~~~v~~~~~~ai~~L~~ 153 (156)
...+++++++++++++.+++
T Consensus 121 ~~LS~~v~~a~~~~~~~i~~ 140 (146)
T TIGR00142 121 YPMSQPVKDAVETLYQRLIG 140 (146)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999887764
No 39
>cd06064 H2MP_F420-Reduc Endopeptidases belonging to F420-reducing hydrogenases group. These hydrogenases from methanogens are encoded by the fru, frc, or frh genes. Sequence comparison indicates that fruD and frcD gene products from Methanococcus voltae are similar to HycI protease of Escherichia coli and are putatively involved in the C-terminal processing of large subunits (FruA and FrcA respectively). FrhD (F420 reducing hydrogenase delta subunit) enzyme belongs to the gene cluster of 8-hydroxy-5-deazaflavin (F420) reducing hydrogenase (FRH) from the thermophilic methanogen Methanobacterium thermoautotrophicum delta H. FrhD subunit is putatively involved in the processing of the coenzyme F420 hydrogenase-processing. It is similar to those frhD genes found in Methanomicrobia and Methanobacteria. It is different from the FrhD conserved domain found in methyl viologen-reducing hydrogenase and F420-non-reducing hydrogenase iron-sulfur subunit D.
Probab=32.01 E-value=79 Score=22.21 Aligned_cols=21 Identities=0% Similarity=-0.053 Sum_probs=18.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 042017 133 NFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 133 ~~~~~~~v~~~~~~ai~~L~~ 153 (156)
....+++++++++++++++++
T Consensus 128 ~~~LS~~v~~a~~~~~~~i~~ 148 (150)
T cd06064 128 EPGLSEEVEKAVPKAVEIILE 148 (150)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 457899999999999999875
No 40
>cd06063 H2MP_Cyano-H2up This group of endopeptidases include HupW enzymes that are specific to the cyanobacterial hydrogenase and are involved in the C-terminal cleavage of the hydrogenase large subunit precursor protein. Cyanobacterial nickel-iron (NiFe)-hydrogenases are found exclusively in the N2-fixing strains and are encoded by hup (hydrogen uptake) genes. These uptake hydrogenases are heterodimers with a large (hupL) and small subunit (hupS) and catalyze the consumption of the H2 produced during N2 fixation. Sequence similarity shows that the putative metal-binding resides are well conserved in this group of hydrogen maturation proteases. This group also includes such proteins as the hydrogenase III from Aquifex aeolicus.
Probab=31.26 E-value=1.2e+02 Score=21.11 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=18.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh
Q 042017 132 FNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 132 ~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
+....+++++++++++++.+++
T Consensus 124 ~g~~LS~~v~~a~~~~~~~i~~ 145 (146)
T cd06063 124 FGLELSPPVKQAAERVAEMIIK 145 (146)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh
Confidence 3457899999999999999876
No 41
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=31.21 E-value=1.4e+02 Score=20.69 Aligned_cols=35 Identities=3% Similarity=-0.064 Sum_probs=24.2
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 120 KGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 120 ~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
+...|.+ +.|... .....|.+++++..+.|+++|+
T Consensus 69 r~v~iaF-D~D~~~-~Tn~~V~~a~~~l~~~L~~~G~ 103 (130)
T PF12965_consen 69 REVYIAF-DADTKP-KTNKNVRRAIKRLGKLLKEAGC 103 (130)
T ss_pred ceEEEEe-cCCCcc-chhHHHHHHHHHHHHHHHHCCC
Confidence 3345666 333222 3357899999999999999985
No 42
>PRK11544 hycI hydrogenase 3 maturation protease; Provisional
Probab=31.09 E-value=1.1e+02 Score=21.83 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=22.2
Q ss_pred EEEeCC-CCCCCCCCHHHHHHHHHHHHHHHhC
Q 042017 124 LGIVRN-PFFNFDEGSPLAQVFDHHLHTLRLN 154 (156)
Q Consensus 124 Ig~~~~-~~~~~~~~~~v~~~~~~ai~~L~~~ 154 (156)
||+... ..+....+++++++++++++.|++.
T Consensus 111 igI~~~~~~~g~~LS~~v~~av~~~~~~l~~~ 142 (156)
T PRK11544 111 LGIQPDIVGFYYPMTQPVKDAVETVYQRLEGW 142 (156)
T ss_pred EEEEeeeccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 455332 2234578999999999999999754
No 43
>cd06070 H2MP_like-2 Putative [NiFe] hydrogenase-specific C-terminal protease. Sequence comparison shows similarity to hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing and assembly with other subunits. Hydrogenase maturation endopeptidases are responsible for the proteolytic processing, liberating a short C-terminal peptide by cleaving after a His or an Arg residue, e.g., HycI (E. coli) is involved in processing of HypE (the large subunit of hydrogenases 3). This cleavage is nickel dependent.
Probab=31.01 E-value=1.1e+02 Score=21.29 Aligned_cols=21 Identities=10% Similarity=0.044 Sum_probs=18.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 042017 133 NFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 133 ~~~~~~~v~~~~~~ai~~L~~ 153 (156)
....+++++++++++++.+++
T Consensus 118 g~~LS~~v~~av~~~~~~i~~ 138 (140)
T cd06070 118 ARGLSEAVIARAEKALEELKK 138 (140)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 347899999999999999876
No 44
>cd06066 H2MP_NAD-link-bidir Endopeptidases that belong to the bidirectional NAD-linked hydrogenase group. This group of endopeptidases are highly specific carboxyl-terminal protease (HoxW protease) which releases a 24-amino-acid peptide from HoxH prior to progression of subunit assembly. These bidirectional hydrogenases are heteropentamers encoded by the hox (hydrogen oxidation) genes, in which complex HoxEFU shows the diaphorase activity, and HoxYH constitutes the NiFe-hydrogenase.
Probab=30.85 E-value=1.1e+02 Score=21.15 Aligned_cols=31 Identities=16% Similarity=-0.025 Sum_probs=22.2
Q ss_pred EEEEeCC-CCCCCCCCHHHHHHHHHHHHHHHh
Q 042017 123 RLGIVRN-PFFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 123 rIg~~~~-~~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
-+|+..+ ..+....++++++++.++++++++
T Consensus 106 i~gi~~~~~~~g~~LS~~v~~av~~~~~~i~~ 137 (139)
T cd06066 106 LLTIPGYNFELGEPLSPAAEAALAAALELLRK 137 (139)
T ss_pred EEEeecccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 4555332 223357899999999999999875
No 45
>TIGR00072 hydrog_prot hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase.
Probab=30.09 E-value=1.1e+02 Score=21.27 Aligned_cols=22 Identities=9% Similarity=0.141 Sum_probs=18.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh
Q 042017 132 FNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 132 ~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
+....+++++++++++++++++
T Consensus 122 ~g~~LS~~v~~~~~~~~~~i~~ 143 (145)
T TIGR00072 122 FGLGLSPEVAAAVPAAVELILA 143 (145)
T ss_pred cCCCCCHHHHHHHHHHHHHHHh
Confidence 3357899999999999999875
No 46
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=29.81 E-value=53 Score=20.88 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHhCC
Q 042017 141 AQVFDHHLHTLRLNY 155 (156)
Q Consensus 141 ~~~~~~ai~~L~~~G 155 (156)
+.++.+.|+.||+.|
T Consensus 33 RtaVwK~Iq~Lr~~G 47 (79)
T COG1654 33 RTAVWKHIQQLREEG 47 (79)
T ss_pred HHHHHHHHHHHHHhC
Confidence 678999999999988
No 47
>PF14502 HTH_41: Helix-turn-helix domain
Probab=29.73 E-value=51 Score=18.96 Aligned_cols=15 Identities=27% Similarity=0.169 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhCCC
Q 042017 142 QVFDHHLHTLRLNYA 156 (156)
Q Consensus 142 ~~~~~ai~~L~~~Ga 156 (156)
--++.|++.|++.||
T Consensus 21 GtiQ~Alk~Le~~ga 35 (48)
T PF14502_consen 21 GTIQNALKFLEENGA 35 (48)
T ss_pred hHHHHHHHHHHHCCc
Confidence 457788899999886
No 48
>TIGR00130 frhD coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). FrhD is not part of the active FRH heterotrimer, but is probably a protease required for maturation. Alternative name: 8-hydroxy-5-deazaflavin (F420) reducing hydrogenase (FRH) subunit delta.
Probab=28.09 E-value=1e+02 Score=21.77 Aligned_cols=21 Identities=0% Similarity=0.041 Sum_probs=17.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 042017 133 NFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 133 ~~~~~~~v~~~~~~ai~~L~~ 153 (156)
....++++++++.++++.+.+
T Consensus 129 ~~~LS~~v~~a~~~~~~~i~~ 149 (153)
T TIGR00130 129 DIGLTEEVNKAIPRAVEIILK 149 (153)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 457899999999999988865
No 49
>COG4917 EutP Ethanolamine utilization protein [Amino acid transport and metabolism]
Probab=27.54 E-value=1.4e+02 Score=21.20 Aligned_cols=31 Identities=23% Similarity=0.101 Sum_probs=20.0
Q ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 120 KGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 120 ~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
.++.||++.+-... . -+.++.+.+.|+++||
T Consensus 90 ~k~vIgvVTK~DLa--e----d~dI~~~~~~L~eaGa 120 (148)
T COG4917 90 VKKVIGVVTKADLA--E----DADISLVKRWLREAGA 120 (148)
T ss_pred ccceEEEEeccccc--c----hHhHHHHHHHHHHcCC
Confidence 34599998873322 1 3456667788888885
No 50
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=27.45 E-value=1.3e+02 Score=21.41 Aligned_cols=76 Identities=8% Similarity=0.014 Sum_probs=43.0
Q ss_pred CCCCcccccccCCHHHHHHHHHHHhCC-------CCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCCCCCC
Q 042017 65 TPRQDSVGPICRTVADAAYVLDAIAGF-------DHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFNFDEG 137 (156)
Q Consensus 65 ~~~~d~~Gplar~v~D~~~~~~~l~g~-------d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~~~~~ 137 (156)
....|++|=+..+......+...-..- |.-++.+. |.+... .......|||+.+-...
T Consensus 38 ~~~IDTPGEyiE~~~~y~aLi~ta~dad~V~ll~dat~~~~~----------~pP~fa-~~f~~pvIGVITK~Dl~---- 102 (143)
T PF10662_consen 38 DNTIDTPGEYIENPRFYHALIVTAQDADVVLLLQDATEPRSV----------FPPGFA-SMFNKPVIGVITKIDLP---- 102 (143)
T ss_pred ccEEECChhheeCHHHHHHHHHHHhhCCEEEEEecCCCCCcc----------CCchhh-cccCCCEEEEEECccCc----
Confidence 345788998888877665554433322 22222221 211211 23456799998862221
Q ss_pred HHHHHHHHHHHHHHHhCCC
Q 042017 138 SPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 138 ~~v~~~~~~ai~~L~~~Ga 156 (156)
.-.+.++++.+.|+.+|+
T Consensus 103 -~~~~~i~~a~~~L~~aG~ 120 (143)
T PF10662_consen 103 -SDDANIERAKKWLKNAGV 120 (143)
T ss_pred -cchhhHHHHHHHHHHcCC
Confidence 124577888899999885
No 51
>cd06062 H2MP_MemB-H2up Endopeptidases belonging to membrane-bound hydrogenases group. These hydrogenases transfer electrons from H2 to a cytochrome that is bound to a membrane-located complex coupling electron transfer to transmembrane proton translocation. Endopeptidase HybD from E. coli is well studied in this group. Maturation of [NiFe] hydrogenases include proteolytic processing of large subunit, assembly with other subunits, and formation of the nickel metallocenter. Hydrogenase maturation endopeptidase (HybD) cleaves a short C-terminal peptide after a His or an Arg residue in the large subunit (pre-HybC) of hydrogenase 2 (hyb operon) in E. coli. This cleavage is nickel dependent. A variety of endopeptidases belong to this group that are similar in function and sequence homology. They include such proteins as HynC, HoxM, and HupD.
Probab=27.40 E-value=1.3e+02 Score=21.04 Aligned_cols=22 Identities=5% Similarity=0.154 Sum_probs=18.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC
Q 042017 133 NFDEGSPLAQVFDHHLHTLRLN 154 (156)
Q Consensus 133 ~~~~~~~v~~~~~~ai~~L~~~ 154 (156)
....+++++++++++++++++.
T Consensus 124 g~~LS~~v~~av~~~~~~i~~~ 145 (146)
T cd06062 124 GLELSPEVAAALPTAIEAVLAE 145 (146)
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 3578999999999999998763
No 52
>PF13730 HTH_36: Helix-turn-helix domain
Probab=26.47 E-value=72 Score=17.93 Aligned_cols=15 Identities=7% Similarity=0.078 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhCC
Q 042017 141 AQVFDHHLHTLRLNY 155 (156)
Q Consensus 141 ~~~~~~ai~~L~~~G 155 (156)
++.+.++++.|++.|
T Consensus 39 ~~Tv~~~i~~L~~~G 53 (55)
T PF13730_consen 39 RRTVQRAIKELEEKG 53 (55)
T ss_pred HHHHHHHHHHHHHCc
Confidence 567888888898887
No 53
>PRK12359 flavodoxin FldB; Provisional
Probab=25.91 E-value=1.6e+02 Score=21.44 Aligned_cols=39 Identities=13% Similarity=-0.026 Sum_probs=26.7
Q ss_pred CCCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 042017 117 HGLKGKRLGIVRNPFFNFDEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 117 ~~l~~lrIg~~~~~~~~~~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
..++++++++.-..... .-......+++...+.|+++||
T Consensus 75 ~dl~gK~vAlFG~Gd~~-~y~~~f~~a~~~l~~~l~~~Ga 113 (172)
T PRK12359 75 LNLEGKIVALYGMGDQL-GYGEWFLDALGMLHDKLAPKGV 113 (172)
T ss_pred CCCCCCEEEEEeCCCCc-cchHHHHHHHHHHHHHHHhCCC
Confidence 46789999986531111 1234578888888899988886
No 54
>PF09170 STN1_2: CST, Suppressor of cdc thirteen homolog, complex subunit STN1; InterPro: IPR015253 STN1 is a component of the CST complex, a complex that binds to single-stranded DNA and is required to protect telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. In addition to telomere protection, the CST complex has probably a more general role in DNA metabolism at non-telomeric sites [, ]. This entry represents a C-terminal uncharacterised domain ; PDB: 1WJ5_A.
Probab=25.37 E-value=76 Score=23.41 Aligned_cols=22 Identities=9% Similarity=0.224 Sum_probs=18.5
Q ss_pred CCCHHHHHHHHHHHHHHHhCCC
Q 042017 135 DEGSPLAQVFDHHLHTLRLNYA 156 (156)
Q Consensus 135 ~~~~~v~~~~~~ai~~L~~~Ga 156 (156)
..+..++..|.+|++.|+++|.
T Consensus 98 s~sk~i~~~FkeAiq~Lqe~G~ 119 (174)
T PF09170_consen 98 STSKQIRSIFKEAIQLLQEKGI 119 (174)
T ss_dssp SS-HHHHHHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHHHCCE
Confidence 4567899999999999999984
No 55
>TIGR00140 hupD hydrogenase expression/formation protein. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease.
Probab=25.06 E-value=1.3e+02 Score=20.45 Aligned_cols=20 Identities=5% Similarity=-0.077 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 042017 134 FDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 134 ~~~~~~v~~~~~~ai~~L~~ 153 (156)
...+++++++++++++.+++
T Consensus 109 ~~LS~~v~~av~~~~~~i~~ 128 (134)
T TIGR00140 109 GSLSPEVAEAIPPAIEIALA 128 (134)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999888765
No 56
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=24.91 E-value=93 Score=20.31 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=16.5
Q ss_pred CHHHHHHHHHHHHHHHhCC
Q 042017 137 GSPLAQVFDHHLHTLRLNY 155 (156)
Q Consensus 137 ~~~v~~~~~~ai~~L~~~G 155 (156)
..|.++.+++|.+.|+++|
T Consensus 70 ~~eL~~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 70 AKELQKEIKEAKADLRKKG 88 (91)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 4567899999999999998
No 57
>PRK10466 hybD hydrogenase 2 maturation endopeptidase; Provisional
Probab=24.47 E-value=1.5e+02 Score=21.16 Aligned_cols=30 Identities=7% Similarity=0.128 Sum_probs=20.8
Q ss_pred EEEeCC-CCCCCCCCHHHHHHHHHHHHHHHh
Q 042017 124 LGIVRN-PFFNFDEGSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 124 Ig~~~~-~~~~~~~~~~v~~~~~~ai~~L~~ 153 (156)
||+... ..+....+++++++++++++.+++
T Consensus 117 vgiep~~~~~g~~LS~~V~~av~~~~~~i~~ 147 (164)
T PRK10466 117 VGVIPESLEPHIGLTPTVEAMIEPALEQVLA 147 (164)
T ss_pred EEEEEeeccCCCCCCHHHHHHHHHHHHHHHH
Confidence 455332 223457899999999999888764
No 58
>PF10965 DUF2767: Protein of unknown function (DUF2767); InterPro: IPR024493 This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.
Probab=24.47 E-value=82 Score=19.56 Aligned_cols=17 Identities=12% Similarity=0.089 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHHHh
Q 042017 137 GSPLAQVFDHHLHTLRL 153 (156)
Q Consensus 137 ~~~v~~~~~~ai~~L~~ 153 (156)
+++..++++.+|+.|++
T Consensus 53 ~~~~~~~me~aI~~Le~ 69 (69)
T PF10965_consen 53 SELQQQAMELAIDLLEE 69 (69)
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 57789999999999974
No 59
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=22.16 E-value=2.2e+02 Score=24.85 Aligned_cols=49 Identities=22% Similarity=0.213 Sum_probs=35.5
Q ss_pred CcccccccCCHHHHHHHHHHHhCCCCCCcccccccccCCCCcccccccCCCCCCCEEEEeCCCCCC
Q 042017 68 QDSVGPICRTVADAAYVLDAIAGFDHYDPATRAASEYIPRGGYKQFLRPHGLKGKRLGIVRNPFFN 133 (156)
Q Consensus 68 ~d~~Gplar~v~D~~~~~~~l~g~d~~d~~s~~~~~~~p~~~~~~~~~~~~l~~lrIg~~~~~~~~ 133 (156)
-+.+|.++|+=.-=..++++|+|....+.-+. ...++.||++..++...
T Consensus 29 G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i-----------------~~~~~~~v~~l~Q~~~~ 77 (530)
T COG0488 29 GERIGLVGRNGAGKSTLLKILAGELEPDSGEV-----------------TRPKGLRVGYLSQEPPL 77 (530)
T ss_pred CCEEEEECCCCCCHHHHHHHHcCCCcCCCCeE-----------------eecCCceEEEeCCCCCc
Confidence 35799999999888999999999875443221 11256899998875443
No 60
>PF00325 Crp: Bacterial regulatory proteins, crp family; InterPro: IPR001808 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. This family groups together a range of proteins, including anr, crp, clp, cysR, fixK, flp, fnr, fnrN, hlyX and ntcA [, ]. Within this family, the HTH motif is situated towards the C terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2OZ6_A 1CGP_B 2GZW_C 1O3T_B 3ROU_A 2CGP_A 3RDI_A 1I5Z_A 3IYD_H 3FWE_B ....
Probab=21.72 E-value=1.3e+02 Score=15.63 Aligned_cols=15 Identities=13% Similarity=0.084 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHhCC
Q 042017 141 AQVFDHHLHTLRLNY 155 (156)
Q Consensus 141 ~~~~~~ai~~L~~~G 155 (156)
++-+.+++++|+++|
T Consensus 16 ~ETVSR~l~~l~~~g 30 (32)
T PF00325_consen 16 RETVSRILKKLERQG 30 (32)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 466788888998887
No 61
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=20.80 E-value=1e+02 Score=20.36 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhCCC
Q 042017 141 AQVFDHHLHTLRLNYA 156 (156)
Q Consensus 141 ~~~~~~ai~~L~~~Ga 156 (156)
+..+.+.+++|+++||
T Consensus 73 ~~~v~~~~~~Lk~~GA 88 (100)
T TIGR03455 73 EKVVNELIDKLKAAGA 88 (100)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 5778889999999997
No 62
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=20.02 E-value=91 Score=21.64 Aligned_cols=15 Identities=7% Similarity=0.082 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhCC
Q 042017 141 AQVFDHHLHTLRLNY 155 (156)
Q Consensus 141 ~~~~~~ai~~L~~~G 155 (156)
.+.+++|+++|+++|
T Consensus 109 ~~dLekAv~~L~eaG 123 (128)
T COG3603 109 EEDLEKAVKALEEAG 123 (128)
T ss_pred hhhHHHHHHHHHHcC
Confidence 467899999999988
Done!