Your job contains 1 sequence.
>042018
MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS
NVSKGILAKSKDLIQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYT
ISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEK
LDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVSVHAEGDTSVDH
YDDHEDVPSLPPKESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQY
RDHFKSDWHKHNLKRKTRQLPPLTVEECLADMELDDSKADLKEYSF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042018
(346 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029152 - symbol:AT1G43860 "AT1G43860" species... 1343 3.6e-137 1
UNIPROTKB|Q6ZD69 - symbol:P0450B04.21 "cDNA clone:001-125... 1129 1.7e-114 1
UNIPROTKB|Q3SWZ6 - symbol:SBDS "Ribosome maturation prote... 576 6.8e-56 1
UNIPROTKB|Q5ZIY4 - symbol:SBDS "Ribosome maturation prote... 575 8.6e-56 1
UNIPROTKB|F1RJJ3 - symbol:SBDS "Uncharacterized protein" ... 575 8.6e-56 1
MGI|MGI:1913961 - symbol:Sbds "Shwachman-Bodian-Diamond s... 574 1.1e-55 1
UNIPROTKB|B5XEK1 - symbol:SBDS "Ribosome maturation prote... 573 1.4e-55 1
RGD|1311043 - symbol:Sbds "Shwachman-Bodian-Diamond syndr... 573 1.4e-55 1
UNIPROTKB|Q9Y3A5 - symbol:SBDS "Ribosome maturation prote... 565 9.9e-55 1
UNIPROTKB|Q5RAZ2 - symbol:SBDS "Ribosome maturation prote... 565 9.9e-55 1
UNIPROTKB|A5D8M6 - symbol:sbds "Ribosome maturation prote... 562 2.1e-54 1
UNIPROTKB|Q6DIT8 - symbol:sbds "Ribosome maturation prote... 560 3.4e-54 1
UNIPROTKB|A8HPN6 - symbol:CHLREDRAFT_102075 "Predicted pr... 559 4.3e-54 1
ZFIN|ZDB-GENE-040426-1116 - symbol:sbds "Shwachman-Bodian... 557 7.0e-54 1
UNIPROTKB|E2R2W6 - symbol:SBDS "Uncharacterized protein" ... 544 1.7e-52 1
DICTYBASE|DDB_G0272324 - symbol:sbds "Shwachman-Bodian-Di... 542 2.7e-52 1
WB|WBGene00021063 - symbol:sbds-1 species:6239 "Caenorhab... 510 6.7e-49 1
UNIPROTKB|Q23202 - symbol:sbds-1 "Ribosome maturation pro... 510 6.7e-49 1
GENEDB_PFALCIPARUM|PF14_0107 - symbol:PF14_0107 "hypothet... 336 3.2e-42 3
UNIPROTKB|Q8ILY6 - symbol:PF14_0107 "Putative uncharacter... 336 3.2e-42 3
FB|FBgn0035714 - symbol:CG8549 species:7227 "Drosophila m... 440 1.7e-41 1
POMBASE|SPAC4F8.03 - symbol:sdo1 "SBDS family ribosome ma... 426 5.3e-40 1
CGD|CAL0004172 - symbol:orf19.2708 species:5476 "Candida ... 379 5.1e-35 1
UNIPROTKB|Q5AF99 - symbol:CaO19.10223 "Putative uncharact... 379 5.1e-35 1
UNIPROTKB|Q7RXW9 - symbol:NCU00476 "Putative uncharacteri... 274 2.1e-34 3
UNIPROTKB|F1M0V8 - symbol:F1M0V8 "Uncharacterized protein... 370 4.6e-34 1
SGD|S000004012 - symbol:SDO1 "Essential protein involved ... 347 1.3e-31 1
UNIPROTKB|G4MNZ9 - symbol:MGG_05662 "Shwachman-Bodian-Dia... 288 6.8e-30 2
UNIPROTKB|Q75F96 - symbol:AAL154C "AAL154Cp" species:2848... 328 1.3e-29 1
ASPGD|ASPL0000027277 - symbol:AN5443 species:162425 "Emer... 234 3.6e-26 3
UNIPROTKB|Q5B1Y7 - symbol:AN5443.2 "UPF0023 family protei... 234 3.6e-26 3
UNIPROTKB|Q7RHF6 - symbol:PY04031 "Unnamed protein produc... 216 9.2e-24 2
UNIPROTKB|Q9UXC5 - symbol:psmA "Proteasome alpha subunit ... 214 2.6e-17 1
UNIPROTKB|Q8TPX6 - symbol:MA_1778 "Putative uncharacteriz... 154 3.1e-09 1
FB|FBgn0030878 - symbol:CG6769 species:7227 "Drosophila m... 130 1.5e-05 1
UNIPROTKB|H9L3C0 - symbol:H9L3C0 "Uncharacterized protein... 121 1.5e-05 1
CGD|CAL0000609 - symbol:REI1 species:5476 "Candida albica... 129 2.4e-05 1
UNIPROTKB|C9JS61 - symbol:ANKZF1 "Ankyrin repeat and zinc... 105 3.4e-05 1
UNIPROTKB|C9K022 - symbol:ANKZF1 "Ankyrin repeat and zinc... 105 3.4e-05 1
UNIPROTKB|F1NNA5 - symbol:ZNF622 "Zinc finger protein 622... 121 0.00013 1
UNIPROTKB|F1NK03 - symbol:ZNF622 "Zinc finger protein 622... 121 0.00014 1
UNIPROTKB|Q90Y35 - symbol:ZNF622 "Zinc finger protein 622... 121 0.00014 1
UNIPROTKB|E2R1D3 - symbol:ZNF622 "Uncharacterized protein... 121 0.00018 1
POMBASE|SPCC550.15c - symbol:SPCC550.15c "ribosome biogen... 121 0.00018 1
ZFIN|ZDB-GENE-050927-1 - symbol:znf622 "zinc finger prote... 120 0.00024 1
UNIPROTKB|F1N194 - symbol:ZNF622 "Uncharacterized protein... 118 0.00040 1
RGD|1309146 - symbol:Zfp622 "zinc finger protein 622" spe... 115 0.00063 1
UNIPROTKB|F1LQ57 - symbol:Fam134b "Protein FAM134B" speci... 115 0.00087 1
>TAIR|locus:2029152 [details] [associations]
symbol:AT1G43860 "AT1G43860" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISM;IBA]
[GO:0006364 "rRNA processing" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IBA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR018978 Pfam:PF09377 EMBL:CP002684 GO:GO:0005634
GO:GO:0005737 GO:GO:0003700 GO:GO:0003723 GO:GO:0042273
GO:GO:0006364 EMBL:AC006423 KO:K14574 OMA:IERAKMK
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 ProtClustDB:CLSN2688443 EMBL:AY054529 EMBL:BT008459
IPI:IPI00529060 PIR:E96502 RefSeq:NP_564488.1 UniGene:At.12064
ProteinModelPortal:Q9MAR2 SMR:Q9MAR2 STRING:Q9MAR2 PRIDE:Q9MAR2
EnsemblPlants:AT1G43860.1 GeneID:840982 KEGG:ath:AT1G43860
TAIR:At1g43860 InParanoid:Q9MAR2 PhylomeDB:Q9MAR2
Genevestigator:Q9MAR2 Uniprot:Q9MAR2
Length = 370
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 264/370 (71%), Positives = 315/370 (85%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MSKTLVQPVGQKRLTNVAVVRLKK G RFEIACYKNKVLSWRS VEKD+DEVLQSHTVYS
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60
Query: 61 NVSKGILAKSKDLIQ------HL-----ILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
NVSKG+LAKSKDL++ H ILEKGELQVAGKERE+QFS+QFRDIATIVMQK
Sbjct: 61 NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTV 169
T+N ETQRPYTISM+ERLMHEIHFAVDP+S+SKKQAL+VIRELQKHFPIKRSPMR+ LTV
Sbjct: 121 TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180
Query: 170 PEQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVS 229
P QN SL+EKL W+ S+VSKD SG+Q+S +CEMEPGLFR+CD+ +R++QGRLEILAVS
Sbjct: 181 PVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRSIQGRLEILAVS 240
Query: 230 VHAEGDTSVDHYDDHEDV------PSLPP----KESADDVLKLSEKIEKQSLSS-GNGNT 278
VHAEGDTS+DHYD+H+D+ P LP K+ D V++LS+K++KQ +S+ N
Sbjct: 241 VHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIKQ 300
Query: 279 EG--KVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEECLADMELDD 336
EG + K KCSTCN +VG+AKQYR+H KSDWHKHNLKRKTR+LPP++ +EC++++++DD
Sbjct: 301 EGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMDD 360
Query: 337 SKADLKEYSF 346
S+ADLK+YSF
Sbjct: 361 SRADLKDYSF 370
>UNIPROTKB|Q6ZD69 [details] [associations]
symbol:P0450B04.21 "cDNA clone:001-125-F01, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0003723
"RNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0042273 EMBL:AP008214
GO:GO:0006364 EMBL:CM000145 eggNOG:COG1500 KO:K14574
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 ProtClustDB:CLSN2688443 EMBL:AP004462 EMBL:AK064053
RefSeq:NP_001060798.1 UniGene:Os.7321 STRING:Q6ZD69
EnsemblPlants:LOC_Os08g01620.1 EnsemblPlants:LOC_Os08g01620.2
GeneID:4344458 KEGG:osa:4344458 OMA:QRRCKEC Uniprot:Q6ZD69
Length = 357
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 220/360 (61%), Positives = 281/360 (78%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MS+TLVQPVGQKRLTNVAVVRL+KHG RFEIAC+ NKVLSWR++VEKD+DEVLQSHTVYS
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRTRVEKDIDEVLQSHTVYS 60
Query: 61 NVSKGILAKSKDLIQ------HL-----ILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
NVSKG+LAKSKDL++ H IL+KGELQV+GKERE Q S+QF +IATIVM K
Sbjct: 61 NVSKGVLAKSKDLLKAFSTDDHTAICLEILDKGELQVSGKEREAQLSSQFHEIATIVMDK 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTV 169
T+N ET+RPYTI+MIERLMH++HFAVDPN +SK+QAL+VI++L +HFPIKR+P+RV T
Sbjct: 121 TINPETRRPYTITMIERLMHDVHFAVDPNLTSKEQALKVIKKLTEHFPIKRAPLRVRFTA 180
Query: 170 PEQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVS 229
P+ +SL EKL+ WNA+++SKD SGSQ S++CE+EP + R C+ L+++QGR+E+L+VS
Sbjct: 181 PKSKFASLTEKLEEWNANVISKDESGSQPSVVCEIEPSILRSCEERLKDVQGRVEVLSVS 240
Query: 230 VHAEGDTSVDHYDDHEDVPSLPPKESADDVLKLSEKIEKQSLSS---GNGNTEGKVKQNK 286
HAEG +SVD Y++ E+ S+P E D V ++ E ++KQS+SS G +GK +Q +
Sbjct: 241 AHAEGGSSVDQYENTEESQSVPAVE-IDPVARIGEAMQKQSISSEPENPGQGQGK-QQRR 298
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEECLADMELDDSKADLKEYSF 346
C C+ V D K YR+H KS WHKHN R LPPL+ EECL +MEL DSK DLK+Y F
Sbjct: 299 CKECDVLVED-KLYREHCKSGWHKHNYTRHKNGLPPLSQEECLVEMELADSKRDLKDYDF 357
>UNIPROTKB|Q3SWZ6 [details] [associations]
symbol:SBDS "Ribosome maturation protein SBDS" species:9913
"Bos taurus" [GO:0030282 "bone mineralization" evidence=ISS]
[GO:0043022 "ribosome binding" evidence=ISS] [GO:0042256 "mature
ribosome assembly" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0030595 "leukocyte chemotaxis" evidence=ISS] [GO:0043148
"mitotic spindle stabilization" evidence=ISS] [GO:0048539 "bone
marrow development" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS] [GO:0000922
"spindle pole" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] InterPro:IPR018978 Pfam:PF09377
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0008283
GO:GO:0043022 GO:GO:0042273 GO:GO:0008017 GO:GO:0000922
GO:GO:0030282 GO:GO:0019843 GO:GO:0043148 GO:GO:0006364
GO:GO:0001833 GO:GO:0042256 GO:GO:0030595 GO:GO:0048539
EMBL:BC104585 IPI:IPI00709555 RefSeq:NP_001029611.1
UniGene:Bt.12631 ProteinModelPortal:Q3SWZ6 STRING:Q3SWZ6
PRIDE:Q3SWZ6 Ensembl:ENSBTAT00000005296 GeneID:513237
KEGG:bta:513237 CTD:51119 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685
HOVERGEN:HBG039762 InParanoid:Q3SWZ6 KO:K14574 OMA:IERAKMK
OrthoDB:EOG40ZQZH NextBio:20870767 InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
Uniprot:Q3SWZ6
Length = 250
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 122/246 (49%), Positives = 165/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL ++ ++ G QL ++C ++PG FR+ D L++ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|Q5ZIY4 [details] [associations]
symbol:SBDS "Ribosome maturation protein SBDS" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006364 "rRNA processing" evidence=IBA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IBA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0043148
"mitotic spindle stabilization" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0042256 "mature ribosome assembly" evidence=ISS]
[GO:0043022 "ribosome binding" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0008283
GO:GO:0003723 GO:GO:0043022 GO:GO:0042273 GO:GO:0000922
GO:GO:0019843 GO:GO:0043148 GO:GO:0006364 GO:GO:0042256
GO:GO:0030595 CTD:51119 eggNOG:COG1500 GeneTree:ENSGT00390000008135
HOGENOM:HOG000216685 HOVERGEN:HBG039762 KO:K14574 OMA:IERAKMK
OrthoDB:EOG40ZQZH InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 EMBL:AJ720650 IPI:IPI00576219
RefSeq:NP_001006211.1 RefSeq:XP_003642436.1 UniGene:Gga.2272
ProteinModelPortal:Q5ZIY4 STRING:Q5ZIY4 PRIDE:Q5ZIY4
Ensembl:ENSGALT00000001658 GeneID:100858362 GeneID:417477
KEGG:gga:100858362 KEGG:gga:417477 InParanoid:Q5ZIY4
NextBio:20820767 Uniprot:Q5ZIY4
Length = 250
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 120/250 (48%), Positives = 169/250 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR ++ G RFEIACY+NKV+ WRS EKD+DEVLQ+HTV+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDIDEVLQTHTVFVNVS 61
Query: 64 KGILAKSKDLIQ-----------HLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DL++ +IL KGELQV+ KER+TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLVRAFGTDDQTEICKVILSKGELQVSDKERQTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V PN S+K+QALEVIR+L++ I+R+ MR+ +P +
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPVK 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL ++ ++ QL ++C ++PG FR+ D L+R+ +G LE+L++
Sbjct: 182 EGKKLKEKLKPL-IKVIENEDFHDQLEIVCLIDPGCFREIDELIRSETKGKGTLEVLSLK 240
Query: 230 VHAEGDTSVD 239
EGD ++
Sbjct: 241 DVEEGDEKLE 250
>UNIPROTKB|F1RJJ3 [details] [associations]
symbol:SBDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0048539
"bone marrow development" evidence=IEA] [GO:0043148 "mitotic
spindle stabilization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0042256 "mature ribosome assembly" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0030282 "bone
mineralization" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005737 GO:GO:0005730
GO:GO:0043022 GO:GO:0000922 GO:GO:0030282 GO:GO:0019843
GO:GO:0043148 GO:GO:0006364 GO:GO:0001833 GO:GO:0042256
GO:GO:0030595 GO:GO:0048539 CTD:51119 GeneTree:ENSGT00390000008135
KO:K14574 InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 OMA:DPYLARD EMBL:FP236642 RefSeq:NP_001231322.1
UniGene:Ssc.15675 Ensembl:ENSSSCT00000008477 GeneID:100516003
KEGG:ssc:100516003 Uniprot:F1RJJ3
Length = 250
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 122/246 (49%), Positives = 165/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L+++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKENMKIERAHMRLRFILPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL ++ ++ G QL ++C ++PG FR+ D L++ +G LE+L +
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>MGI|MGI:1913961 [details] [associations]
symbol:Sbds "Shwachman-Bodian-Diamond syndrome homolog
(human)" species:10090 "Mus musculus" [GO:0000922 "spindle pole"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IBA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=ISO;IBA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0019843 "rRNA
binding" evidence=ISO] [GO:0030282 "bone mineralization"
evidence=ISO] [GO:0030595 "leukocyte chemotaxis" evidence=ISO]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature
ribosome assembly" evidence=ISO] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IBA] [GO:0043022 "ribosome binding"
evidence=ISO] [GO:0043148 "mitotic spindle stabilization"
evidence=ISO] [GO:0048539 "bone marrow development" evidence=ISO]
InterPro:IPR018978 Pfam:PF09377 MGI:MGI:1913961 GO:GO:0005634
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003723
GO:GO:0043022 GO:GO:0042273 GO:GO:0000922 GO:GO:0030282
GO:GO:0019843 GO:GO:0043148 GO:GO:0006364 GO:GO:0001833
GO:GO:0042256 GO:GO:0030595 GO:GO:0048539 CTD:51119 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685
HOVERGEN:HBG039762 KO:K14574 OMA:IERAKMK OrthoDB:EOG40ZQZH
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 EMBL:AK005079 EMBL:AK014648 EMBL:AK019228
EMBL:AK168847 EMBL:BC003849 EMBL:X99668 IPI:IPI00136151
RefSeq:NP_075737.1 UniGene:Mm.280484 ProteinModelPortal:P70122
SMR:P70122 STRING:P70122 PhosphoSite:P70122 PaxDb:P70122
PRIDE:P70122 Ensembl:ENSMUST00000026387 GeneID:66711 KEGG:mmu:66711
UCSC:uc008zuj.1 InParanoid:P70122 NextBio:322437 Bgee:P70122
CleanEx:MM_SBDS Genevestigator:P70122 GermOnline:ENSMUSG00000025337
Uniprot:P70122
Length = 250
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 125/246 (50%), Positives = 166/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRN-LQGR--LEILAVS 229
L EKL + S+D S QL ++C ++PG FR+ D L++ +GR LE+L++
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|B5XEK1 [details] [associations]
symbol:SBDS "Ribosome maturation protein SBDS" species:8030
"Salmo salar" [GO:0000922 "spindle pole" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=ISS] [GO:0030282 "bone mineralization" evidence=ISS]
[GO:0030595 "leukocyte chemotaxis" evidence=ISS] [GO:0043148
"mitotic spindle stabilization" evidence=ISS] [GO:0048539 "bone
marrow development" evidence=ISS] InterPro:IPR018978 Pfam:PF09377
GO:GO:0005737 GO:GO:0005730 GO:GO:0008017 GO:GO:0000922
GO:GO:0030282 GO:GO:0019843 GO:GO:0043148 GO:GO:0006364
GO:GO:0030595 GO:GO:0048539 HOVERGEN:HBG039762 InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
EMBL:BT049470 EMBL:BT057084 Uniprot:B5XEK1
Length = 250
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/250 (49%), Positives = 170/250 (68%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS EKDLDEVLQ+ +V++NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVS 61
Query: 64 KGILAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK DL I IL KGELQV+ KER++Q FRDIATIV +K VN
Sbjct: 62 KGQVAKKDDLSKAFGTDDLTEICKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+++IER M +IH++V N S+K+QALEVIR+L++ I+R+ MR+ L +P +
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKANKSTKQQALEVIRQLKESIEIQRAHMRLRLVLPAK 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLR---NLQGRLEILAVS 229
+ L EKL +V ++ QL ++C ++PG FR+ D L+R +G LE+L++
Sbjct: 182 DGKRLKEKLKPL-LKVVESEDFDDQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLK 240
Query: 230 VHAEGDTSVD 239
EGD ++
Sbjct: 241 DVEEGDERLE 250
>RGD|1311043 [details] [associations]
symbol:Sbds "Shwachman-Bodian-Diamond syndrome" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=ISO;ISS]
[GO:0001833 "inner cell mass cell proliferation" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IBA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0006364 "rRNA processing" evidence=ISO;IBA] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008283 "cell proliferation"
evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO]
[GO:0030282 "bone mineralization" evidence=ISO] [GO:0030595
"leukocyte chemotaxis" evidence=ISO] [GO:0042256 "mature ribosome
assembly" evidence=ISO;ISS] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IBA] [GO:0043022 "ribosome binding"
evidence=ISO;ISS] [GO:0043148 "mitotic spindle stabilization"
evidence=ISO] [GO:0048539 "bone marrow development" evidence=ISO]
InterPro:IPR018978 Pfam:PF09377 RGD:1311043 GO:GO:0005634
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0008283
GO:GO:0003723 GO:GO:0043022 GO:GO:0042273 GO:GO:0000922
GO:GO:0006364 GO:GO:0042256 CTD:51119 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685
HOVERGEN:HBG039762 KO:K14574 OMA:IERAKMK OrthoDB:EOG40ZQZH
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 EMBL:BC086335 IPI:IPI00371054 RefSeq:NP_001008290.1
UniGene:Rn.107123 ProteinModelPortal:Q5RK30 STRING:Q5RK30
PRIDE:Q5RK30 Ensembl:ENSRNOT00000001190 GeneID:288615
KEGG:rno:288615 InParanoid:Q5RK30 NextBio:628424
Genevestigator:Q5RK30 Uniprot:Q5RK30
Length = 250
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/246 (50%), Positives = 165/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL + S+D S QL ++C ++PG FR+ D L++ +G LE+L++
Sbjct: 182 EGKKLKEKLKPLMKVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|Q9Y3A5 [details] [associations]
symbol:SBDS "Ribosome maturation protein SBDS" species:9606
"Homo sapiens" [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IBA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030282 "bone
mineralization" evidence=IMP] [GO:0000922 "spindle pole"
evidence=IDA] [GO:0008017 "microtubule binding" evidence=IDA]
[GO:0048539 "bone marrow development" evidence=IMP] [GO:0030595
"leukocyte chemotaxis" evidence=IDA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043148 "mitotic spindle stabilization" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0042256 "mature ribosome assembly"
evidence=IDA] [GO:0043022 "ribosome binding" evidence=IDA]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005737 GO:GO:0005654
GO:GO:0005730 GO:GO:0008283 GO:GO:0043022 GO:GO:0042273
GO:GO:0008017 GO:GO:0000922 GO:GO:0030282 GO:GO:0019843
GO:GO:0043148 GO:GO:0006364 EMBL:CH471140 GO:GO:0001833
GO:GO:0042256 GO:GO:0030595 GO:GO:0048539 Orphanet:88 CTD:51119
eggNOG:COG1500 HOGENOM:HOG000216685 HOVERGEN:HBG039762 KO:K14574
OrthoDB:EOG40ZQZH InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 EMBL:AY169963 EMBL:AF151855
EMBL:AK001779 EMBL:AK289609 EMBL:BC065700 IPI:IPI00427330
RefSeq:NP_057122.2 UniGene:Hs.110445 PDB:2KDO PDB:2L9N PDBsum:2KDO
PDBsum:2L9N ProteinModelPortal:Q9Y3A5 SMR:Q9Y3A5 IntAct:Q9Y3A5
STRING:Q9Y3A5 PhosphoSite:Q9Y3A5 DMDM:28380824 PaxDb:Q9Y3A5
PeptideAtlas:Q9Y3A5 PRIDE:Q9Y3A5 DNASU:51119
Ensembl:ENST00000246868 GeneID:51119 KEGG:hsa:51119 UCSC:uc003tvm.1
GeneCards:GC07M066452 HGNC:HGNC:19440 HPA:HPA028891 MIM:260400
MIM:607444 neXtProt:NX_Q9Y3A5 Orphanet:811 PharmGKB:PA134978742
InParanoid:Q9Y3A5 OMA:DPYLARD PhylomeDB:Q9Y3A5 ChiTaRS:SBDS
EvolutionaryTrace:Q9Y3A5 GenomeRNAi:51119 NextBio:53897
ArrayExpress:Q9Y3A5 Bgee:Q9Y3A5 CleanEx:HS_SBDS
Genevestigator:Q9Y3A5 GermOnline:ENSG00000126524 Uniprot:Q9Y3A5
Length = 250
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 121/246 (49%), Positives = 163/246 (66%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V N S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL ++ ++ G QL ++C ++PG FR+ D L++ +G LE+L +
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|Q5RAZ2 [details] [associations]
symbol:SBDS "Ribosome maturation protein SBDS" species:9601
"Pongo abelii" [GO:0000922 "spindle pole" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=ISS] [GO:0030282 "bone mineralization" evidence=ISS]
[GO:0030595 "leukocyte chemotaxis" evidence=ISS] [GO:0042256
"mature ribosome assembly" evidence=ISS] [GO:0043022 "ribosome
binding" evidence=ISS] [GO:0043148 "mitotic spindle stabilization"
evidence=ISS] [GO:0048539 "bone marrow development" evidence=ISS]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005737 GO:GO:0005654
GO:GO:0005730 GO:GO:0008283 GO:GO:0043022 GO:GO:0008017
GO:GO:0000922 GO:GO:0030282 GO:GO:0019843 GO:GO:0043148
GO:GO:0006364 GO:GO:0001833 GO:GO:0042256 GO:GO:0030595
GO:GO:0048539 CTD:51119 GeneTree:ENSGT00390000008135
HOVERGEN:HBG039762 KO:K14574 InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 OMA:DPYLARD EMBL:CR858869
RefSeq:NP_001125618.1 UniGene:Pab.19145 ProteinModelPortal:Q5RAZ2
SMR:Q5RAZ2 PRIDE:Q5RAZ2 Ensembl:ENSPPYT00000020402 GeneID:100172536
KEGG:pon:100172536 InParanoid:Q5RAZ2 Uniprot:Q5RAZ2
Length = 250
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 121/246 (49%), Positives = 163/246 (66%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+ +IER M +IH++V N S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
L EKL ++ ++ G QL ++C ++PG FR+ D L++ +G LE+L +
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|A5D8M6 [details] [associations]
symbol:sbds "Ribosome maturation protein SBDS" species:8355
"Xenopus laevis" [GO:0000922 "spindle pole" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0042256 "mature
ribosome assembly" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0008283 GO:GO:0043022
GO:GO:0000922 GO:GO:0042256 CTD:51119 HOVERGEN:HBG039762 KO:K14574
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 EMBL:BC141736 RefSeq:NP_001092159.1
UniGene:Xl.46120 ProteinModelPortal:A5D8M6 PRIDE:A5D8M6
GeneID:100049749 KEGG:xla:100049749 Xenbase:XB-GENE-1003512
Uniprot:A5D8M6
Length = 250
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 123/246 (50%), Positives = 165/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS EKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG AK +DL++ IL KGELQV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQGAKKEDLLKAFGTEDQTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+++IER M +IH++V S+K+QAL+VI++L++ I+R+ MR+ VP +
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFIVPAK 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLR---NLQGRLEILAVS 229
+ L EKL I S +N +L ++C ++PG FR+ D L+R +G LE+L++
Sbjct: 182 DGKKLKEKLKPLIKHIES-ENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|Q6DIT8 [details] [associations]
symbol:sbds "Ribosome maturation protein SBDS" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=ISS] [GO:0042256 "mature ribosome assembly"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0008283 GO:GO:0003723
GO:GO:0043022 GO:GO:0042273 GO:GO:0000922 GO:GO:0006364
GO:GO:0042256 CTD:51119 eggNOG:COG1500 GeneTree:ENSGT00390000008135
HOGENOM:HOG000216685 HOVERGEN:HBG039762 KO:K14574 OrthoDB:EOG40ZQZH
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 EMBL:CR855635 EMBL:BC075447 RefSeq:NP_001004953.1
UniGene:Str.16646 ProteinModelPortal:Q6DIT8 STRING:Q6DIT8
PRIDE:Q6DIT8 Ensembl:ENSXETT00000022243 GeneID:448365
KEGG:xtr:448365 Xenbase:XB-GENE-1003506 InParanoid:Q6DIT8
Bgee:Q6DIT8 Uniprot:Q6DIT8
Length = 250
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 121/246 (49%), Positives = 165/246 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS EKDLDEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 64 KGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DL++ IL KGELQV+ KER TQ FRDIATIV K VN
Sbjct: 62 KGQVAKKEDLLKSFGTEDPTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+++IER M +IH++V S+K+QAL+VI++L++ I+R+ MR+ +P +
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAK 181
Query: 173 NISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLR---NLQGRLEILAVS 229
+ L EKL S +N +L ++C ++PG FR+ D L+R +G LE+L++
Sbjct: 182 DGKKLKEKLKPLIKHTES-ENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLK 240
Query: 230 VHAEGD 235
EGD
Sbjct: 241 DVEEGD 246
>UNIPROTKB|A8HPN6 [details] [associations]
symbol:CHLREDRAFT_102075 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=ISS]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634 GO:GO:0005737
GO:GO:0003723 GO:GO:0042273 GO:GO:0006364 EMBL:DS496108
eggNOG:COG1500 KO:K14574 InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 RefSeq:XP_001689481.1
STRING:A8HPN6 EnsemblPlants:EDP09219 GeneID:5715144
KEGG:cre:CHLREDRAFT_102075 ProtClustDB:CLSN2688443 Uniprot:A8HPN6
Length = 239
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 117/239 (48%), Positives = 164/239 (68%)
Query: 11 QKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKS 70
QKRLTN+AVVRLKK+G RFEIACYKNKV WRS +EKDLDEVLQ+ T++ NV KG++AK
Sbjct: 1 QKRLTNIAVVRLKKNGERFEIACYKNKVGDWRSGIEKDLDEVLQTTTIFHNVGKGVVAKD 60
Query: 71 KDLI-------QHLI----LEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPY 119
K+L QH I L KGELQV +ER+ ++ + F+D+A ++++K VN T RPY
Sbjct: 61 KELQAAFGTTDQHAICLEILAKGELQVGERERKQEYEHLFKDVAGVLVEKCVNPNTNRPY 120
Query: 120 TISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLME 179
T+SM+ER + +IHF +DP S+K+QALE + LQK FPI+R+ MR+ LTVP + L +
Sbjct: 121 TLSMLERALRDIHFNLDPKKSAKQQALEALPLLQKEFPIERARMRLRLTVPVEAQQELEQ 180
Query: 180 KLDAWNASIVSKD-NSGSQLSLICEMEPGLFRDCDTLLRNLQ---GRLEILAVSVHAEG 234
L A + D +G ++ ++EPG+FRD + ++ GRLE+L+++V AEG
Sbjct: 181 LLQREAADVAGLDVAAGGMCVVVAQVEPGVFRDLNNFMQTTARGAGRLEVLSLAVMAEG 239
>ZFIN|ZDB-GENE-040426-1116 [details] [associations]
symbol:sbds "Shwachman-Bodian-Diamond syndrome"
species:7955 "Danio rerio" [GO:0042254 "ribosome biogenesis"
evidence=IEA;IMP] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0006364 "rRNA processing" evidence=IBA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IBA] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IMP]
InterPro:IPR018978 Pfam:PF09377 ZFIN:ZDB-GENE-040426-1116
GO:GO:0005634 GO:GO:0005737 GO:GO:0016477 GO:GO:0003723
GO:GO:0042273 GO:GO:0006364 GO:GO:0031017 GO:GO:0002573
GeneTree:ENSGT00390000008135 InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 EMBL:CU914374 IPI:IPI01024559
Ensembl:ENSDART00000149631 ArrayExpress:F8W5Q9 Bgee:F8W5Q9
Uniprot:F8W5Q9
Length = 257
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 124/256 (48%), Positives = 172/256 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS EKDLDEVLQ++TV+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTNTVFVNVS 61
Query: 64 KGILAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KG +AK +DL I IL KGELQV+ KER++Q FRDIATIV +K VN
Sbjct: 62 KGQVAKKEDLSNAFGTDDLTEICKQILSKGELQVSDKERQSQLEQMFRDIATIVAEKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
ET+RPYT+++IER M +IHF+V N S+K+QALEVI++L++ I+R+ MR+ +P +
Sbjct: 122 PETKRPYTVNLIERAMKDIHFSVKANKSTKQQALEVIKQLKESIQIQRAHMRLRFVLPAK 181
Query: 173 NISSLMEKLDAWNASIVSKD-NSGSQLSL-----ICEMEPGLFRDCDTLLR---NLQGRL 223
+ L EKL ++ ++D + ++ L +C ++PG FRD D L+R +G L
Sbjct: 182 DGKRLKEKLKPLIKAVENEDFDDQLEMELFLLFQVCLIDPGCFRDIDELIRCETKGKGTL 241
Query: 224 EILAVSVHAEGDTSVD 239
E+L++ EGD ++
Sbjct: 242 EVLSLKDVEEGDEKLE 257
>UNIPROTKB|E2R2W6 [details] [associations]
symbol:SBDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048539 "bone marrow development"
evidence=IEA] [GO:0043148 "mitotic spindle stabilization"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0030595
"leukocyte chemotaxis" evidence=IEA] [GO:0030282 "bone
mineralization" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] InterPro:IPR018978 Pfam:PF09377
GO:GO:0005737 GO:GO:0005730 GO:GO:0043022 GO:GO:0000922
GO:GO:0030282 GO:GO:0019843 GO:GO:0043148 GO:GO:0006364
GO:GO:0001833 GO:GO:0042256 GO:GO:0030595 GO:GO:0048539
GeneTree:ENSGT00390000008135 OMA:IERAKMK InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
EMBL:AAEX03004194 Ensembl:ENSCAFT00000017228 Uniprot:E2R2W6
Length = 252
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 118/248 (47%), Positives = 162/248 (65%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQV--EKDLDEVLQSHTVYSN 61
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ W++ EKDLDEVLQ+H+V+ N
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWKAAFLREKDLDEVLQTHSVFVN 61
Query: 62 VSKGILAKSKDLIQHL-----------ILEKGELQVAGKERETQFSNQFRDIATIVMQKT 110
VSKG +AK +DLI IL KGE+QV+ KER TQ FRDIATIV K
Sbjct: 62 VSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKC 121
Query: 111 VNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVP 170
VN ET+RPYT+ +IER M +IH++V N S+K+QALEVI++L++ I+R+ MR+ +P
Sbjct: 122 VNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMQIERAHMRLRFLLP 181
Query: 171 EQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILA 227
L EKL ++ ++ G QL ++C ++PG FR+ D L++ +G LE+L
Sbjct: 182 VNEGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLN 240
Query: 228 VSVHAEGD 235
+ EGD
Sbjct: 241 LKDVEEGD 248
>DICTYBASE|DDB_G0272324 [details] [associations]
symbol:sbds "Shwachman-Bodian-Diamond syndrome
protein" species:44689 "Dictyostelium discoideum" [GO:0031143
"pseudopodium" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS;IBA] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISS] [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA;IBA]
[GO:0003723 "RNA binding" evidence=IBA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR018978
Pfam:PF09377 dictyBase:DDB_G0272324 GO:GO:0005634 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0005819 GenomeReviews:CM000151_GR
GO:GO:0003723 EMBL:AAFI02000008 GO:GO:0042273 GO:GO:0030687
GO:GO:0006364 GO:GO:0000054 eggNOG:COG1500 KO:K14574 OMA:IERAKMK
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
RefSeq:XP_645141.1 ProteinModelPortal:Q86KZ5 STRING:Q86KZ5
EnsemblProtists:DDB0233143 GeneID:8618311 KEGG:ddi:DDB_G0272324
ProtClustDB:CLSZ2729240 Uniprot:Q86KZ5
Length = 274
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 110/251 (43%), Positives = 170/251 (67%)
Query: 4 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVS 63
++ PV K LTN+ VVR KK +FEIACY +KV S+RS++EKDL+EV+Q H +++NVS
Sbjct: 2 SIFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKIEKDLNEVIQIHRIFTNVS 61
Query: 64 KGILAKSKDLIQH-----------LILEKGELQVAGKERETQFSNQFRDIATIVMQKTVN 112
KGI+AK +LI+ LILEKGELQV+ KER+ Q F+DIATIV +K VN
Sbjct: 62 KGIIAKKDELIKAFGTDNEQEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVN 121
Query: 113 SETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
+ETQRP +S+IE+ M ++H+++ P SSK+Q+LEVI+++ PI+R+ MR+ +T+P +
Sbjct: 122 TETQRPIPVSIIEKAMKDVHYSIHPTKSSKQQSLEVIKQISSVIPIQRAQMRLNITIPTK 181
Query: 173 NISSL-MEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAV 228
+L +KL + I +D G LS++C ++PG +R D L++ +G ++I+ +
Sbjct: 182 ESKTLNRDKLMVLVSKIEEEDRDGGGLSIVCLVDPGSYRKIDELIKQETKGKGFIDIINL 241
Query: 229 SVHAEGDTSVD 239
+V EG+T ++
Sbjct: 242 AVAKEGETKIN 252
>WB|WBGene00021063 [details] [associations]
symbol:sbds-1 species:6239 "Caenorhabditis elegans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR018978
Pfam:PF09377 GO:GO:0005634 GO:GO:0008340 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0005819 GO:GO:0003723
GO:GO:0042273 GO:GO:0006364 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685 KO:K14574
OMA:IERAKMK InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 EMBL:FO080477 RefSeq:NP_497226.2
ProteinModelPortal:Q23202 SMR:Q23202 STRING:Q23202 PaxDb:Q23202
EnsemblMetazoa:W06E11.4.1 EnsemblMetazoa:W06E11.4.2 GeneID:175218
KEGG:cel:CELE_W06E11.4 UCSC:W06E11.4 CTD:175218 WormBase:W06E11.4
InParanoid:Q23202 NextBio:887244 Uniprot:Q23202
Length = 253
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 108/252 (42%), Positives = 162/252 (64%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MSK + P QK LTNVAVVR+KK G RFEIACYKNKV++WR++ EKD+DEVLQ+HTV+S
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 61 NVSKGILAKSKDLIQ-----------HLILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
NVSKG L+K ++LI +IL+KG+LQV+ KER+ ++++ ++
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASM 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTV 169
VN ET+RP S+I++ + E+HF++ PN SSK+QAL+ I +L++ I+R+ M++ + +
Sbjct: 121 VVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAI 180
Query: 170 PEQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEIL 226
P + S+ KL + + D L ++ +EPG FR D L+RN GRLEIL
Sbjct: 181 PTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEIL 240
Query: 227 AVSVHAEGDTSV 238
++ EG+ +
Sbjct: 241 SLKDVVEGELQI 252
>UNIPROTKB|Q23202 [details] [associations]
symbol:sbds-1 "Ribosome maturation protein SBDS"
species:6239 "Caenorhabditis elegans" [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IBA] [GO:0006364 "rRNA processing"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0003723 "RNA binding" evidence=IBA]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634 GO:GO:0008340
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0005819
GO:GO:0003723 GO:GO:0042273 GO:GO:0006364 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685 KO:K14574
OMA:IERAKMK InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 PROSITE:PS01267 EMBL:FO080477 RefSeq:NP_497226.2
ProteinModelPortal:Q23202 SMR:Q23202 STRING:Q23202 PaxDb:Q23202
EnsemblMetazoa:W06E11.4.1 EnsemblMetazoa:W06E11.4.2 GeneID:175218
KEGG:cel:CELE_W06E11.4 UCSC:W06E11.4 CTD:175218 WormBase:W06E11.4
InParanoid:Q23202 NextBio:887244 Uniprot:Q23202
Length = 253
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 108/252 (42%), Positives = 162/252 (64%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MSK + P QK LTNVAVVR+KK G RFEIACYKNKV++WR++ EKD+DEVLQ+HTV+S
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 61 NVSKGILAKSKDLIQ-----------HLILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
NVSKG L+K ++LI +IL+KG+LQV+ KER+ ++++ ++
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASM 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTV 169
VN ET+RP S+I++ + E+HF++ PN SSK+QAL+ I +L++ I+R+ M++ + +
Sbjct: 121 VVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAI 180
Query: 170 PEQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEIL 226
P + S+ KL + + D L ++ +EPG FR D L+RN GRLEIL
Sbjct: 181 PTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEIL 240
Query: 227 AVSVHAEGDTSV 238
++ EG+ +
Sbjct: 241 SLKDVVEGELQI 252
>GENEDB_PFALCIPARUM|PF14_0107 [details] [associations]
symbol:PF14_0107 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0042254 EMBL:AE014187
KO:K14574 InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 PROSITE:PS01267
RefSeq:XP_001348280.1 ProteinModelPortal:Q8ILY6 IntAct:Q8ILY6
MINT:MINT-1560774 EnsemblProtists:PF14_0107:mRNA GeneID:811688
KEGG:pfa:PF14_0107 EuPathDB:PlasmoDB:PF3D7_1410900
HOGENOM:HOG000281345 OMA:DRENESM ProtClustDB:CLSZ2501021
Uniprot:Q8ILY6
Length = 638
Score = 336 (123.3 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 75/206 (36%), Positives = 124/206 (60%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
M L QP+ Q + TNVA+V+ K G +FEIACYKNK++ W++ E ++D+VLQSH +++
Sbjct: 1 MVGALFQPINQVKFTNVAIVKYKYKGKKFEIACYKNKIIDWKNGTELNIDDVLQSHLIFT 60
Query: 61 NVSKGILAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
N+SKG +AK +L I ILEKG LQ++ KER ++D+ I+ +
Sbjct: 61 NISKGEIAKKSELNSCFQSDDNYKICKTILEKGTLQISNKERAILKEKIYKDMIEILHEM 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFP--IKRSPMRVGL 167
+VN +T P + +MIE ++ I ++++ + S+KKQAL+V L K + I+R+ MR+ +
Sbjct: 121 SVNPQTGYPISTNMIESMVKNIGYSINIDDSAKKQALKVFDTLSKEYDDIIQRAFMRIQI 180
Query: 168 TVPEQNISSLMEKLDAWNASIVSKDN 193
+ L+ L+ N I+ ++N
Sbjct: 181 IYDDIIKDELINLLNTNNV-IIEEEN 205
Score = 114 (45.2 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 268 KQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEE 327
++ L+S N N V C++C + + Y+ H +SD+H +N+KRK ++LPP+++EE
Sbjct: 565 QKELNSNNNNKLNSVDVIMCTSCLTKI-EKSNYKLHCRSDFHVYNVKRKYKKLPPISLEE 623
Query: 328 CLADMELDDS 337
+++ D S
Sbjct: 624 -YREIDFDVS 632
Score = 46 (21.3 bits), Expect = 3.8e-35, Sum P(3) = 3.8e-35
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 267 EKQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHK----HNLK---RKTRQ 319
E QS + N + + K K+NK + N + K D S ++ N+K +K R+
Sbjct: 457 ETQSCENKNNDDKNKNKKNKKNKNNKNSKNNKNNNDDDNSMTNEMSEEDNIKSSNKKDRK 516
Query: 320 LPPLTVEECLADMELDDSKADLK 342
++ + D + ++K DLK
Sbjct: 517 NKSKNKKDQINDQSILNTKDDLK 539
Score = 45 (20.9 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 235 DTSVDHYDDHEDVPSLPPKESADDVLKLSEKIEK 268
DTS+DH D + +S + K EK +K
Sbjct: 365 DTSLDHMSDRYKISGKKKNKSEKEKEKEKEKEKK 398
Score = 39 (18.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 261 KLSEKIEKQSLSSGNGNTEGKVKQNKCS 288
K+++ + SS N NT + N S
Sbjct: 308 KINDNVNDSVSSSMNNNTHNSLDDNNIS 335
>UNIPROTKB|Q8ILY6 [details] [associations]
symbol:PF14_0107 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0042254 EMBL:AE014187
KO:K14574 InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 PROSITE:PS01267
RefSeq:XP_001348280.1 ProteinModelPortal:Q8ILY6 IntAct:Q8ILY6
MINT:MINT-1560774 EnsemblProtists:PF14_0107:mRNA GeneID:811688
KEGG:pfa:PF14_0107 EuPathDB:PlasmoDB:PF3D7_1410900
HOGENOM:HOG000281345 OMA:DRENESM ProtClustDB:CLSZ2501021
Uniprot:Q8ILY6
Length = 638
Score = 336 (123.3 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 75/206 (36%), Positives = 124/206 (60%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
M L QP+ Q + TNVA+V+ K G +FEIACYKNK++ W++ E ++D+VLQSH +++
Sbjct: 1 MVGALFQPINQVKFTNVAIVKYKYKGKKFEIACYKNKIIDWKNGTELNIDDVLQSHLIFT 60
Query: 61 NVSKGILAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
N+SKG +AK +L I ILEKG LQ++ KER ++D+ I+ +
Sbjct: 61 NISKGEIAKKSELNSCFQSDDNYKICKTILEKGTLQISNKERAILKEKIYKDMIEILHEM 120
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFP--IKRSPMRVGL 167
+VN +T P + +MIE ++ I ++++ + S+KKQAL+V L K + I+R+ MR+ +
Sbjct: 121 SVNPQTGYPISTNMIESMVKNIGYSINIDDSAKKQALKVFDTLSKEYDDIIQRAFMRIQI 180
Query: 168 TVPEQNISSLMEKLDAWNASIVSKDN 193
+ L+ L+ N I+ ++N
Sbjct: 181 IYDDIIKDELINLLNTNNV-IIEEEN 205
Score = 114 (45.2 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 268 KQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEE 327
++ L+S N N V C++C + + Y+ H +SD+H +N+KRK ++LPP+++EE
Sbjct: 565 QKELNSNNNNKLNSVDVIMCTSCLTKI-EKSNYKLHCRSDFHVYNVKRKYKKLPPISLEE 623
Query: 328 CLADMELDDS 337
+++ D S
Sbjct: 624 -YREIDFDVS 632
Score = 46 (21.3 bits), Expect = 3.8e-35, Sum P(3) = 3.8e-35
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 267 EKQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHK----HNLK---RKTRQ 319
E QS + N + + K K+NK + N + K D S ++ N+K +K R+
Sbjct: 457 ETQSCENKNNDDKNKNKKNKKNKNNKNSKNNKNNNDDDNSMTNEMSEEDNIKSSNKKDRK 516
Query: 320 LPPLTVEECLADMELDDSKADLK 342
++ + D + ++K DLK
Sbjct: 517 NKSKNKKDQINDQSILNTKDDLK 539
Score = 45 (20.9 bits), Expect = 3.2e-42, Sum P(3) = 3.2e-42
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 235 DTSVDHYDDHEDVPSLPPKESADDVLKLSEKIEK 268
DTS+DH D + +S + K EK +K
Sbjct: 365 DTSLDHMSDRYKISGKKKNKSEKEKEKEKEKEKK 398
Score = 39 (18.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 261 KLSEKIEKQSLSSGNGNTEGKVKQNKCS 288
K+++ + SS N NT + N S
Sbjct: 308 KINDNVNDSVSSSMNNNTHNSLDDNNIS 335
>FB|FBgn0035714 [details] [associations]
symbol:CG8549 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0006364
"rRNA processing" evidence=IBA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IBA] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0042273 GO:GO:0006364
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 EMBL:AY094666 ProteinModelPortal:Q8SXD6 SMR:Q8SXD6
STRING:Q8SXD6 PRIDE:Q8SXD6 FlyBase:FBgn0035714 InParanoid:Q8SXD6
OrthoDB:EOG4SF7NV ArrayExpress:Q8SXD6 Bgee:Q8SXD6 Uniprot:Q8SXD6
Length = 252
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 107/250 (42%), Positives = 150/250 (60%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MSK + P Q RLTNVA+VRLKK G RFEIACYKNKVLSWRS EKD+DEVLQ++TV++
Sbjct: 1 MSK-IFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTYTVFT 59
Query: 61 NVSKGILAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQK 109
NVSKG AK +L I IL KGELQV+ KER++ Q I V
Sbjct: 60 NVSKGQAAKKDELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAAL 119
Query: 110 TVNSETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTV 169
VN ET+RPY S+IE+ + + HF+V N ++K+ LE I+ L+ H PI+RS M++ ++
Sbjct: 120 CVNPETRRPYPASIIEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF 179
Query: 170 P-EQNISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEI 225
++ L E + ++ ++ + L L ++PG +R D L+RN +G LE+
Sbjct: 180 AGKEGGGKLKESVVKLANAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLEL 239
Query: 226 LAVSVHAEGD 235
L + E +
Sbjct: 240 LELKEVVESE 249
>POMBASE|SPAC4F8.03 [details] [associations]
symbol:sdo1 "SBDS family ribosome maturation protein Sdo1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000054
"ribosomal subunit export from nucleus" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISO]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=ISO]
InterPro:IPR018978 Pfam:PF09377 PomBase:SPAC4F8.03 GO:GO:0005829
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0042273
GO:GO:0030687 GO:GO:0000054 eggNOG:COG1500 HOGENOM:HOG000216685
KO:K14574 InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 PIR:T38833 RefSeq:NP_593869.1
ProteinModelPortal:O14179 STRING:O14179 PRIDE:O14179
EnsemblFungi:SPAC4F8.03.1 GeneID:2543459 KEGG:spo:SPAC4F8.03
OMA:NQPSNQI OrthoDB:EOG42VCRJ NextBio:20804471 Uniprot:O14179
Length = 246
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 99/239 (41%), Positives = 149/239 (62%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QPVGQ RLTNV+VV+ KK G RFE+ACYKNKV WR+++E DLDEVLQ H V++NVSKG
Sbjct: 5 QPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGH 64
Query: 67 LAKSKDL--------IQHLILE---KGELQVAGKERETQFSNQFRDIATIVMQKTVNSET 115
+A +DL I +ILE KG+ QV KER Q S+ +RDI + V ++ +
Sbjct: 65 VASRQDLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNS 124
Query: 116 QRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQK--HFPIKRSPMRVGLTVPEQN 173
+RPY S+IE+ + + F+V + ++K QALE I++LQ+ PI R+ MR+ + V +
Sbjct: 125 KRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQ 184
Query: 174 ISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVS 229
+L E+L + A + ++N + I + PG ++ D L+RN +G +++L +S
Sbjct: 185 GKALRERLRSL-ADEIEEENIDDEYECIALVIPGNYKLIDELVRNETKNRGMVQVLDMS 242
>CGD|CAL0004172 [details] [associations]
symbol:orf19.2708 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] InterPro:IPR018978 Pfam:PF09377 CGD:CAL0004172
GO:GO:0042254 EMBL:AACQ01000023 EMBL:AACQ01000025 eggNOG:COG1500
HOGENOM:HOG000216685 KO:K14574 InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
RefSeq:XP_720229.1 RefSeq:XP_720459.1 ProteinModelPortal:Q5AF99
STRING:Q5AF99 GeneID:3637907 GeneID:3638087 KEGG:cal:CaO19.10223
KEGG:cal:CaO19.2708 Uniprot:Q5AF99
Length = 255
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 93/250 (37%), Positives = 147/250 (58%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP Q RLTNV++VR+KK RFEIACY+NKV WRS+VEKD+DEVLQ V+ NVSKG
Sbjct: 6 QPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFINVSKGQ 65
Query: 67 LAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSET 115
+A + DL I IL KGE+Q+ KER + + I+ K +N +
Sbjct: 66 VANNDDLQKCFGTTNQDEIIAEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRS 125
Query: 116 QRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIREL-QKHF-PIKRSPMRVGLTVPEQN 173
++ Y SMIE++++E+ F ++P +K QAL+ I+ L +K PI R+ M+V +T+ ++
Sbjct: 126 KKRYPPSMIEKVLNEVKFHLNPTKPTKIQALDAIKLLVEKQIIPIARAQMKVRITLSKKA 185
Query: 174 -ISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVSVHA 232
+ + +++ IV +DN+G Q ++ ++P +R TL+ N G ++ A
Sbjct: 186 YLKTFQDEIKPVIDQIVEEDNNGKQYEIVGIIDPINYRVLVTLIENTDGSNKV------A 239
Query: 233 EGDTSVDHYD 242
+G+ S++ D
Sbjct: 240 KGEGSIEVLD 249
>UNIPROTKB|Q5AF99 [details] [associations]
symbol:CaO19.10223 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR018978 Pfam:PF09377
CGD:CAL0004172 GO:GO:0042254 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG1500 HOGENOM:HOG000216685 KO:K14574 InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
RefSeq:XP_720229.1 RefSeq:XP_720459.1 ProteinModelPortal:Q5AF99
STRING:Q5AF99 GeneID:3637907 GeneID:3638087 KEGG:cal:CaO19.10223
KEGG:cal:CaO19.2708 Uniprot:Q5AF99
Length = 255
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 93/250 (37%), Positives = 147/250 (58%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP Q RLTNV++VR+KK RFEIACY+NKV WRS+VEKD+DEVLQ V+ NVSKG
Sbjct: 6 QPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFINVSKGQ 65
Query: 67 LAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSET 115
+A + DL I IL KGE+Q+ KER + + I+ K +N +
Sbjct: 66 VANNDDLQKCFGTTNQDEIIAEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRS 125
Query: 116 QRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIREL-QKHF-PIKRSPMRVGLTVPEQN 173
++ Y SMIE++++E+ F ++P +K QAL+ I+ L +K PI R+ M+V +T+ ++
Sbjct: 126 KKRYPPSMIEKVLNEVKFHLNPTKPTKIQALDAIKLLVEKQIIPIARAQMKVRITLSKKA 185
Query: 174 -ISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVSVHA 232
+ + +++ IV +DN+G Q ++ ++P +R TL+ N G ++ A
Sbjct: 186 YLKTFQDEIKPVIDQIVEEDNNGKQYEIVGIIDPINYRVLVTLIENTDGSNKV------A 239
Query: 233 EGDTSVDHYD 242
+G+ S++ D
Sbjct: 240 KGEGSIEVLD 249
>UNIPROTKB|Q7RXW9 [details] [associations]
symbol:NCU00476 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0042273 GO:GO:0006364
EMBL:AABX02000001 eggNOG:COG1500 HOGENOM:HOG000216685 KO:K14574
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 OrthoDB:EOG42VCRJ
RefSeq:XP_956795.1 ProteinModelPortal:Q7RXW9 STRING:Q7RXW9
EnsemblFungi:EFNCRT00000000146 GeneID:3872942 KEGG:ncr:NCU00476
Uniprot:Q7RXW9
Length = 315
Score = 274 (101.5 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 62/134 (46%), Positives = 82/134 (61%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP Q +LTNV++VRLKK RFE+ACYKNKVL WRS +E DLD VLQ V+ NVSKG
Sbjct: 5 QPSNQIKLTNVSLVRLKKGKKRFEVACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSKGQ 64
Query: 67 LAKSKDL---------IQHLILE---KGELQVAGKERETQFSNQFRDIATIVMQKTVNSE 114
A + +L + +ILE KGE+QV KER Q ++ +IV K V+
Sbjct: 65 TAPTAELQKAFGKDTSVNDIILEILKKGEMQVGEKERSAQLERVHNEVVSIVASKLVDPR 124
Query: 115 TQRPYTISMIERLM 128
T++ YT MI++ +
Sbjct: 125 TKKVYTTGMIDKAL 138
Score = 66 (28.3 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 135 VDPNSSSKKQALEVIRELQKH--FPIKRSPMRVGLT 168
V N S+K QALE ++ L H P+ R+ MR+ +T
Sbjct: 188 VSTNKSAKSQALEAMKALVAHQPIPVARARMRLRIT 223
Score = 59 (25.8 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 176 SLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHA 232
++ +K+ ++ + S+D G + L+ +EPG F+ + + QGR+E+L ++V
Sbjct: 254 TVKDKILSFVEQVESQDVMGQEWELVGFVEPGAFKILSDFIGSETKGQGRVEVLDMAVTH 313
Query: 233 E 233
E
Sbjct: 314 E 314
>UNIPROTKB|F1M0V8 [details] [associations]
symbol:F1M0V8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR018978 Pfam:PF09377 GO:GO:0042254
GeneTree:ENSGT00390000008135 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 IPI:IPI00559908
Ensembl:ENSRNOT00000012098 Uniprot:F1M0V8
Length = 235
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 90/240 (37%), Positives = 142/240 (59%)
Query: 14 LTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDL 73
LTNV ++++K+ G FE+A Y+NK +W S VEKD+DE LQ+++++ V K ++AK KD
Sbjct: 1 LTNVTLLQMKQEGKHFELASYRNK--TWWSGVEKDIDEFLQTYSLFVKVFKCLVAKKKDF 58
Query: 74 I-------QHLI----LEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTIS 122
I Q LI L KGE+ V+ K + TQ FRDIAT V K V ET+R Y I
Sbjct: 59 INAFGTDDQTLICKHILTKGEVYVSDK-KNTQLEQMFRDIATTVAYKCVKLETKRLYCII 117
Query: 123 MIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLD 182
+ ER +IH+ V N S+K+QALEVI+++++ I+++ M + +P +L + L
Sbjct: 118 LSERATKDIHYLV--NQSTKQQALEVIKQVKEKMKIEQAHMHLHFILPVNEGKNLKDNLK 175
Query: 183 AWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRN---LQGRLEILAVSVHAEGDTSVD 239
+V ++ QL +IC ++PG FR+ D +++ +G L +L++ EGD V+
Sbjct: 176 PLKKVVVESEDYNRQLEIICLIDPGYFREIDEMVKKETKSKGILVVLSLKDVEEGDEKVE 235
>SGD|S000004012 [details] [associations]
symbol:SDO1 "Essential protein involved in ribosome
maturation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0042256 "mature ribosome assembly"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IBA] InterPro:IPR018978
Pfam:PF09377 SGD:S000004012 GO:GO:0005634 GO:GO:0005737
EMBL:BK006945 GO:GO:0003723 GO:GO:0042256 eggNOG:COG1500
GeneTree:ENSGT00390000008135 HOGENOM:HOG000216685 KO:K14574
InterPro:IPR018023 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
PROSITE:PS01267 OrthoDB:EOG42VCRJ EMBL:Z73194 PIR:S64849
RefSeq:NP_013122.1 ProteinModelPortal:Q07953 SMR:Q07953
IntAct:Q07953 MINT:MINT-2492507 STRING:Q07953 PaxDb:Q07953
PeptideAtlas:Q07953 EnsemblFungi:YLR022C GeneID:850709
KEGG:sce:YLR022C CYGD:YLR022c OMA:KVQDYRK ChEMBL:CHEMBL1741198
NextBio:966763 Genevestigator:Q07953 GermOnline:YLR022C
Uniprot:Q07953
Length = 250
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 88/240 (36%), Positives = 139/240 (57%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP GQ +LTNV++VRLKK RFE+ACY+NKV +R +EKDLDEVLQ H V+ NVSKG+
Sbjct: 5 QPSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGL 64
Query: 67 LAKSKDL-----------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSET 115
+A +DL + I+ KGE+Q++ KER+ + ++ TIV K +N +
Sbjct: 65 VANKEDLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVS 124
Query: 116 QRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIREL--QKHFPIKRSPMRVGLTVPEQN 173
++ Y +MI + + E+ F+ N +K QALE I+ L ++ PI R+ M+V + + E +
Sbjct: 125 KKRYPPTMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPS 184
Query: 174 IS-SLMEKLDAWNASIVSKDNSGSQLSLICE--MEPGLFRDCDTLLRNLQGRLEILAVSV 230
L+EK+ AS + C ++P +RD TL + +G +++L ++V
Sbjct: 185 RQPELIEKISKLIASSPGESTKPELDPWTCTGLIDPVNYRDLMTLC-DKKGTVQVLDMAV 243
>UNIPROTKB|G4MNZ9 [details] [associations]
symbol:MGG_05662 "Shwachman-Bodian-Diamond syndrome
protein" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] InterPro:IPR018978
Pfam:PF09377 GO:GO:0005829 GO:GO:0005730 EMBL:CM001231
GO:GO:0006364 KO:K14574 InterPro:IPR019783 InterPro:IPR002140
PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291
RefSeq:XP_003710560.1 ProteinModelPortal:G4MNZ9
EnsemblFungi:MGG_05662T0 GeneID:2676018 KEGG:mgr:MGG_05662
Uniprot:G4MNZ9
Length = 320
Score = 288 (106.4 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 68/140 (48%), Positives = 85/140 (60%)
Query: 1 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYS 60
MS+ + QP Q +LTNV++VRLKK RFEIACYKNKVL WRS +E DLD VLQ V+
Sbjct: 1 MSRQINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 61 NVSKGILAKSKDL---------IQHLILE---KGELQVAGKERETQFSNQFRDIATIVMQ 108
NVSKG A S DL + +ILE KG++QV KER Q ++ IV
Sbjct: 61 NVSKGQTAPSADLAKAFGKDVPVADVILEILNKGDIQVGDKERAQQLERVHNEVVGIVAS 120
Query: 109 KTVNSETQRPYTISMIERLM 128
K V+ T+R YT MIE+ +
Sbjct: 121 KLVDPRTKRVYTTGMIEKAL 140
Score = 58 (25.5 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 176 SLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHA 232
++ +K+ + + ++D GS+ + +EPG F+ + N QGR+E+L ++V
Sbjct: 259 TVKDKILGYIEQVENQDVVGSEWEVTGFVEPGAFKAVSDFIGNETKGQGRVEVLDMAVTH 318
Query: 233 E 233
E
Sbjct: 319 E 319
Score = 42 (19.8 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 245 EDVPSLPPKESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCNAYVGD 296
ED P D +L E++E Q + G V+ + ++G+
Sbjct: 250 EDGEQKAPGTVKDKILGYIEQVENQDVVGSEWEVTGFVEPGAFKAVSDFIGN 301
>UNIPROTKB|Q75F96 [details] [associations]
symbol:AAL154C "AAL154Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=ISS] InterPro:IPR018978
Pfam:PF09377 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0042273 EMBL:AE016814 GenomeReviews:AE016814_GR GO:GO:0006364
HOGENOM:HOG000216685 KO:K14574 InterPro:IPR018023
InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PROSITE:PS01267
OrthoDB:EOG42VCRJ RefSeq:NP_982388.1 ProteinModelPortal:Q75F96
STRING:Q75F96 PRIDE:Q75F96 EnsemblFungi:AAS50212 GeneID:4618580
KEGG:ago:AGOS_AAL154C OMA:ETQWISK PhylomeDB:Q75F96 Uniprot:Q75F96
Length = 283
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 87/237 (36%), Positives = 135/237 (56%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP GQ +LTNV++VRLKK RFE+ACY+NKV +R VE DLDEVLQ + V+ NVSKG
Sbjct: 42 QPSGQIKLTNVSLVRLKKGKKRFEVACYQNKVQDYRRGVETDLDEVLQINQVFLNVSKGQ 101
Query: 67 LAKSKDLI-------QHL----ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSET 115
+A ++DL Q + IL +GE+Q++ KER+ ++ T+V K VN +
Sbjct: 102 VASNEDLNGAFGTKEQEVVIKEILSRGEIQLSEKERQQMHGKITNELLTLVSAKCVNPNS 161
Query: 116 QRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIREL-QKHF-PIKRSPMRVGLTVPEQN 173
++ Y +MI + + E+ F V N +K QALE I+ L Q+ PI R+ MRV +P +
Sbjct: 162 KKRYPPTMIHKALAELKFNVVTNKPAKLQALEAIKLLVQRQIIPIARAKMRVKAVLPREG 221
Query: 174 ISSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNLQGRLEILAVSV 230
+ + + + A+ + S + ++P +R+ TL G L++L ++V
Sbjct: 222 NAEAIAQAASLIAATEAAPESATTWMCTGLIDPMNYRELVTLCGKC-GTLQVLDMAV 277
>ASPGD|ASPL0000027277 [details] [associations]
symbol:AN5443 species:162425 "Emericella nidulans"
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] InterPro:IPR018978 Pfam:PF09377
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:BN001305
GO:GO:0042273 EMBL:AACD01000094 GO:GO:0006364 eggNOG:COG1500
HOGENOM:HOG000216685 KO:K14574 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
OMA:NQPSNQI OrthoDB:EOG42VCRJ RefSeq:XP_663047.1
ProteinModelPortal:Q5B1Y7 STRING:Q5B1Y7
EnsemblFungi:CADANIAT00003646 GeneID:2871732 KEGG:ani:AN5443.2
Uniprot:Q5B1Y7
Length = 343
Score = 234 (87.4 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 56/137 (40%), Positives = 81/137 (59%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP Q + TNV+VVRLKK RFE+ACYKNK+L +RS EKDLD VLQ T++ +VSK
Sbjct: 5 QPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQ 64
Query: 67 LAKSKDLIQHL------------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSE 114
A + +LI+ IL KGE+QV +ER+ +++ IV + ++
Sbjct: 65 TAPAAELIKAFGPDTPADEIRQEILRKGEVQVGERERKEIAERIEKEVLDIVSGRLIDPT 124
Query: 115 TQRPYTISMIERLMHEI 131
T+R YT MI + + ++
Sbjct: 125 TKRVYTPGMISKALDQL 141
Score = 65 (27.9 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 135 VDPNSSSKKQALEVIREL--QKHFPIKRSPMRVGLTVP 170
V+PN S+K ALE ++ L + P+ R+ MR+ +T P
Sbjct: 181 VNPNKSAKSLALEAMKALIAWQPIPVMRARMRLRVTCP 218
Score = 58 (25.5 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 16/62 (25%), Positives = 36/62 (58%)
Query: 175 SSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVH 231
S++ +K+ ++ SI S++ + + ++ EPG F+ + + N +GR+E+L ++V
Sbjct: 281 SNVKDKILSFIESIESQEIASDEWEVVGFAEPGAFKGLNEFVGNETRGRGRVEVLDMAVT 340
Query: 232 AE 233
E
Sbjct: 341 YE 342
Score = 57 (25.1 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 17/65 (26%), Positives = 25/65 (38%)
Query: 239 DHYDDHEDVPSLP--PKESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCNAYVGD 296
D + E P P P D +L E IE Q ++S G + N +VG+
Sbjct: 265 DTDSEGESAPVQPKGPSNVKDKILSFIESIESQEIASDEWEVVGFAEPGAFKGLNEFVGN 324
Query: 297 AKQYR 301
+ R
Sbjct: 325 ETRGR 329
>UNIPROTKB|Q5B1Y7 [details] [associations]
symbol:AN5443.2 "UPF0023 family protein (AFU_orthologue;
AFUA_6G13530)" species:227321 "Aspergillus nidulans FGSC A4"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] InterPro:IPR018978 Pfam:PF09377
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:BN001305
GO:GO:0042273 EMBL:AACD01000094 GO:GO:0006364 eggNOG:COG1500
HOGENOM:HOG000216685 KO:K14574 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
OMA:NQPSNQI OrthoDB:EOG42VCRJ RefSeq:XP_663047.1
ProteinModelPortal:Q5B1Y7 STRING:Q5B1Y7
EnsemblFungi:CADANIAT00003646 GeneID:2871732 KEGG:ani:AN5443.2
Uniprot:Q5B1Y7
Length = 343
Score = 234 (87.4 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 56/137 (40%), Positives = 81/137 (59%)
Query: 7 QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGI 66
QP Q + TNV+VVRLKK RFE+ACYKNK+L +RS EKDLD VLQ T++ +VSK
Sbjct: 5 QPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQ 64
Query: 67 LAKSKDLIQHL------------ILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSE 114
A + +LI+ IL KGE+QV +ER+ +++ IV + ++
Sbjct: 65 TAPAAELIKAFGPDTPADEIRQEILRKGEVQVGERERKEIAERIEKEVLDIVSGRLIDPT 124
Query: 115 TQRPYTISMIERLMHEI 131
T+R YT MI + + ++
Sbjct: 125 TKRVYTPGMISKALDQL 141
Score = 65 (27.9 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 135 VDPNSSSKKQALEVIREL--QKHFPIKRSPMRVGLTVP 170
V+PN S+K ALE ++ L + P+ R+ MR+ +T P
Sbjct: 181 VNPNKSAKSLALEAMKALIAWQPIPVMRARMRLRVTCP 218
Score = 58 (25.5 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 16/62 (25%), Positives = 36/62 (58%)
Query: 175 SSLMEKLDAWNASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVH 231
S++ +K+ ++ SI S++ + + ++ EPG F+ + + N +GR+E+L ++V
Sbjct: 281 SNVKDKILSFIESIESQEIASDEWEVVGFAEPGAFKGLNEFVGNETRGRGRVEVLDMAVT 340
Query: 232 AE 233
E
Sbjct: 341 YE 342
Score = 57 (25.1 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 17/65 (26%), Positives = 25/65 (38%)
Query: 239 DHYDDHEDVPSLP--PKESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCNAYVGD 296
D + E P P P D +L E IE Q ++S G + N +VG+
Sbjct: 265 DTDSEGESAPVQPKGPSNVKDKILSFIESIESQEIASDEWEVVGFAEPGAFKGLNEFVGN 324
Query: 297 AKQYR 301
+ R
Sbjct: 325 ETRGR 329
>UNIPROTKB|Q7RHF6 [details] [associations]
symbol:PY04031 "Unnamed protein product, putative"
species:73239 "Plasmodium yoelii yoelii" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0042273 GO:GO:0006364
eggNOG:COG1500 KO:K14574 InterPro:IPR018023 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
PROSITE:PS01267 EMBL:AABL01001208 RefSeq:XP_724279.1
ProteinModelPortal:Q7RHF6 GeneID:3789606 KEGG:pyo:PY04031
EuPathDB:PlasmoDB:PY04031 Uniprot:Q7RHF6
Length = 634
Score = 216 (81.1 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 60/197 (30%), Positives = 109/197 (55%)
Query: 34 YKNKVLSWRSQV--EKDLDEVLQSHTVYSNVSKGILAKSKDL-----------IQHLILE 80
Y NK ++ E ++D+VLQSH +++N+SKG +AK L I ILE
Sbjct: 48 YSNKTYLSSLKICNELNIDDVLQSHLIFTNISKGEIAKKSQLNSCFNSDDNYEICKTILE 107
Query: 81 KGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSS 140
KG LQ++ +ER ++DI ++ + +VN +T P + +MIE ++ + ++++ + S
Sbjct: 108 KGTLQISNRERAILKEKMYKDIIEMLHEMSVNPQTGYPLSTNMIESMIKNVGYSINIDDS 167
Query: 141 SKKQALEVIRELQKHFP--IKRSPMRVGLTVPEQNISSLMEKLDAWNASIVSKDNSGSQL 198
+KKQAL+V L K + I+R+ MR+ + + + I + + KL N +I+ +D + L
Sbjct: 168 TKKQALKVFELLHKEYEDVIQRAFMRIQI-ICDDFIKNDVIKLLNDNNAIIEEDKMTNNL 226
Query: 199 SLICEMEPGLFRDCDTL 215
+ E L ++CD +
Sbjct: 227 ----KREDELNQNCDNI 239
Score = 142 (55.0 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 40/143 (27%), Positives = 73/143 (51%)
Query: 5 LVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSK 64
L QP+ Q + TNVA+V+ K G +FEIACYKNK++ W++ +++ + T S++
Sbjct: 4 LFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGKKRNYS----NKTYLSSLKI 59
Query: 65 GILAKSKDLIQ-HLI---LEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYT 120
D++Q HLI + KGE+ + S+ +I +++K + R
Sbjct: 60 CNELNIDDVLQSHLIFTNISKGEIAKKSQLNSCFNSDDNYEICKTILEKGTLQISNRERA 119
Query: 121 I---SMIERLMHEIH-FAVDPNS 139
I M + ++ +H +V+P +
Sbjct: 120 ILKEKMYKDIIEMLHEMSVNPQT 142
Score = 123 (48.4 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 28/85 (32%), Positives = 53/85 (62%)
Query: 254 ESADDVLKLSEKIEKQSLS-SGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHN 312
++ D +++ S K EK S+ + N T G + C++C + + Y+ H +SD+H +N
Sbjct: 550 QTDDKIIQNSTK-EKPSIGINNNDKTTGMIM---CTSCLTQI-EKNNYKLHCRSDFHVYN 604
Query: 313 LKRKTRQLPPLTVEECLADMELDDS 337
+KRK ++LPP+T+EE + +++ D S
Sbjct: 605 VKRKYKKLPPITLEEYI-EIDFDVS 628
Score = 59 (25.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 33/174 (18%), Positives = 64/174 (36%)
Query: 139 SSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWNASIVSKDNSGSQL 198
+S +K + ++ Q FPI I + +K++ N + ++
Sbjct: 355 TSEEKLDSKKNKKNQDSFPIDNEKTNKEKFADNSKIKT-KQKINKHNVERKGDNLQTYKI 413
Query: 199 SLICEMEPGLFRDCDTLLRNLQGRLEILAVSVHAEGDTSVDHYDDHEDVPSLPPKESADD 258
+C P L+R D + + +S + + TS + D P++P KES +
Sbjct: 414 VFLCY--PSLYRCIDEFTKKNKKNCSSKILSNNVKVATS--NKKKKNDSPTIP-KESDNT 468
Query: 259 VLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHN 312
K E+ K + N+ K + N N Y+ ++ K+N
Sbjct: 469 NKKKEERKNKNTNDKNKKNSISKKEHNDSKGNNTYMKNSNDSESSVNDKISKNN 522
Score = 51 (23.0 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 229 SVHAEGDTSVDHYDDHED-VPSLPPKESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNK 286
S H +G ++ +H + E+ + S K++ D +EK K+ + N + K K NK
Sbjct: 341 STHKKGTSNNEHSETSEEKLDSKKNKKNQDSFPIDNEKTNKEKFAD-NSKIKTKQKINK 398
Score = 40 (19.1 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 253 KESADDVLKLSEKIEKQSLSSGNGNTEGKVKQNKCSTCN 291
K S D +++KI K + N N + K + +K + N
Sbjct: 505 KNSNDSESSVNDKISKNNNYITNKNEQSKNQNSKNNGIN 543
>UNIPROTKB|Q9UXC5 [details] [associations]
symbol:psmA "Proteasome alpha subunit (C-terminus)"
species:2287 "Sulfolobus solfataricus" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0000502 GO:GO:0042273
GO:GO:0006364 EMBL:Y18930 InterPro:IPR009022 SUPFAM:SSF54980
KO:K14574 InterPro:IPR019783 InterPro:IPR002140 PANTHER:PTHR10927
Pfam:PF01172 SUPFAM:SSF89895 TIGRFAMs:TIGR00291 PIR:B90222
RefSeq:NP_342243.1 ProteinModelPortal:Q9UXC5 GeneID:1455000
KEGG:sso:SSO0737 ProtClustDB:PRK13760 Uniprot:Q9UXC5
Length = 233
Score = 214 (80.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 63/226 (27%), Positives = 109/226 (48%)
Query: 19 VVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDL----- 73
+V+ + HG RFEI + L++RS L +V+ S T+Y +V KG+ A L
Sbjct: 9 IVKYESHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKKVFG 68
Query: 74 ------IQHLILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERL 127
I IL KGEL V ++R+ + + I + + V+ +T P + +E
Sbjct: 69 TTDFETIVKEILLKGELPVTAEQRKEMLETKRKQIIDFIHRNAVDPKTNLPIPPTRLEMA 128
Query: 128 MHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWNAS 187
M + +D N + QA+++++E+ K PIK + + + VP + S + +L N
Sbjct: 129 MEQARIQIDLNKDVEAQAMQIVKEISKIIPIKIARALLSIKVPSEYSSKVKSQLH--NLG 186
Query: 188 IVSKDNSGSQLSLICEME-P-GLFRDCDTLLRNL-QGRLEILAVSV 230
V K N +L+ E+E P G +D L +L +G +E+ + V
Sbjct: 187 EVKKANWLEDGTLLAELEIPAGAQQDVIDKLNSLTKGEVEVKVLQV 232
>UNIPROTKB|Q8TPX6 [details] [associations]
symbol:MA_1778 "Putative uncharacterized protein"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISS] InterPro:IPR018978 Pfam:PF09377 GO:GO:0005634
GO:GO:0005737 GO:GO:0003723 GO:GO:0042273 GO:GO:0006364
EMBL:AE010299 GenomeReviews:AE010299_GR InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG1500 KO:K14574 InterPro:IPR019783
InterPro:IPR002140 PANTHER:PTHR10927 Pfam:PF01172 SUPFAM:SSF89895
TIGRFAMs:TIGR00291 OMA:DPYLARD ProtClustDB:PRK13760
RefSeq:NP_616704.1 ProteinModelPortal:Q8TPX6 SMR:Q8TPX6
GeneID:1473667 KEGG:mac:MA1778 BioCyc:MACE188937:GI2O-1838-MONOMER
Uniprot:Q8TPX6
Length = 230
Score = 154 (59.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 35/170 (20%), Positives = 79/170 (46%)
Query: 14 LTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDL 73
L RLK+ FE+ L+++ E +L+++L T++ + ++G A D+
Sbjct: 4 LDEAVTARLKRGSKHFEVLVEPEGALAYKRGEEVNLEDILAVETIFEDANRGDRAAESDI 63
Query: 74 IQH-----------LILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTIS 122
+ +IL+ GELQ+ ++R+ + + + + + +N +T+ P+ +
Sbjct: 64 LNSFETTDPFEIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTRAPHPPA 123
Query: 123 MIERLMHEIHFAVDPNSSSKKQALEVIRELQKHFPIKRSPMRVGLTVPEQ 172
IER M E +DP S + ++ ++ PI+ + + + +P +
Sbjct: 124 RIERAMEEAKVHIDPLKSVDQLVTITMKAIRPLIPIRFEEINIAVKIPPE 173
>FB|FBgn0030878 [details] [associations]
symbol:CG6769 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
EMBL:AE014298 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 KO:K14816
InterPro:IPR022755 Pfam:PF12171 eggNOG:NOG253541
GeneTree:ENSGT00390000018047 OMA:SATYCTV EMBL:AY061122
RefSeq:NP_573252.1 UniGene:Dm.199 IntAct:Q9VX08 MINT:MINT-1655152
STRING:Q9VX08 EnsemblMetazoa:FBtr0074493 EnsemblMetazoa:FBtr0334034
GeneID:32770 KEGG:dme:Dmel_CG6769 UCSC:CG6769-RA
FlyBase:FBgn0030878 InParanoid:Q9VX08 OrthoDB:EOG4KH19P
GenomeRNAi:32770 NextBio:780278 Uniprot:Q9VX08
Length = 409
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEE 327
C C+A A R+H+K+DWH++NLKR+ QLPP+T EE
Sbjct: 6 CLNCDARFASADVQRNHYKTDWHRYNLKRRVAQLPPVTAEE 46
>UNIPROTKB|H9L3C0 [details] [associations]
symbol:H9L3C0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00390000018047 EMBL:AADN02064304
Ensembl:ENSGALT00000036200 OMA:PPSHSKE Uniprot:H9L3C0
Length = 190
Score = 121 (47.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA R H+K+DWH++NLKRK +PP+T E
Sbjct: 6 CITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAE 45
>CGD|CAL0000609 [details] [associations]
symbol:REI1 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0007117 "budding cell bud growth" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
CGD:CAL0000609 GO:GO:0008270 GO:GO:0005622 KO:K14816
EMBL:AACQ01000231 RefSeq:XP_710870.1 STRING:Q59MB3 GeneID:3647536
KEGG:cal:CaO19.59 Uniprot:Q59MB3
Length = 475
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 282 VKQNKCSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLT 324
+K C+TCN A+ R H KS+WH++NLKR+ QLPP+T
Sbjct: 73 IKMFTCNTCNLQFPAAEDQRSHMKSEWHRYNLKRRVAQLPPIT 115
>UNIPROTKB|C9JS61 [details] [associations]
symbol:ANKZF1 "Ankyrin repeat and zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
HGNC:HGNC:25527 ChiTaRS:ANKZF1 EMBL:AC068946 IPI:IPI00916154
ProteinModelPortal:C9JS61 STRING:C9JS61 Ensembl:ENST00000453432
ArrayExpress:C9JS61 Bgee:C9JS61 Uniprot:C9JS61
Length = 115
Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEECLADMELDDSKADLKEYS 345
CSTC+ + ++ R+H+K DWH+ NLK++ + P L+ D E S DL S
Sbjct: 9 CSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSA----LDFEKQSSTGDLSSIS 63
>UNIPROTKB|C9K022 [details] [associations]
symbol:ANKZF1 "Ankyrin repeat and zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
HGNC:HGNC:25527 ChiTaRS:ANKZF1 EMBL:AC068946 IPI:IPI00916826
ProteinModelPortal:C9K022 STRING:C9K022 Ensembl:ENST00000447157
HOGENOM:HOG000168463 ArrayExpress:C9K022 Bgee:C9K022 Uniprot:C9K022
Length = 140
Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVEECLADMELDDSKADLKEYS 345
CSTC+ + ++ R+H+K DWH+ NLK++ + P L+ D E S DL S
Sbjct: 74 CSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSA----LDFEKQSSTGDLSSIS 128
>UNIPROTKB|F1NNA5 [details] [associations]
symbol:ZNF622 "Zinc finger protein 622" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00390000018047 IPI:IPI00595687
EMBL:AADN02007603 EMBL:AADN02007604 Ensembl:ENSGALT00000021144
ArrayExpress:F1NNA5 Uniprot:F1NNA5
Length = 373
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA R H+K+DWH++NLKRK +PP+T E
Sbjct: 6 CITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAE 45
>UNIPROTKB|F1NK03 [details] [associations]
symbol:ZNF622 "Zinc finger protein 622" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00390000018047 OMA:DFMCLYC
EMBL:AADN02007603 EMBL:AADN02007604 IPI:IPI01017158
Ensembl:ENSGALT00000037128 ArrayExpress:F1NK03 Uniprot:F1NK03
Length = 404
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA R H+K+DWH++NLKRK +PP+T E
Sbjct: 6 CITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAE 45
>UNIPROTKB|Q90Y35 [details] [associations]
symbol:ZNF622 "Zinc finger protein 622" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR015880
SMART:SM00355 SMART:SM00451 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 KO:K14816
InterPro:IPR022755 Pfam:PF12171 eggNOG:NOG253541
HOGENOM:HOG000183078 EMBL:AF299386 EMBL:AF299387 IPI:IPI00595687
IPI:IPI00600813 RefSeq:NP_989461.1 UniGene:Gga.3853
ProteinModelPortal:Q90Y35 STRING:Q90Y35 GeneID:373921
KEGG:gga:373921 CTD:90441 HOVERGEN:HBG056035 InParanoid:Q90Y35
OrthoDB:EOG4PG611 NextBio:20813453 Uniprot:Q90Y35
Length = 405
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA R H+K+DWH++NLKRK +PP+T E
Sbjct: 6 CITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAE 45
>UNIPROTKB|E2R1D3 [details] [associations]
symbol:ZNF622 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00390000018047 OMA:SATYCTV
EMBL:AAEX03003249 Ensembl:ENSCAFT00000030335 Uniprot:E2R1D3
Length = 458
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC GDA+ R H+KSDWH++NLKRK + P++ E
Sbjct: 6 CITCRVAFGDAEVQRAHYKSDWHRYNLKRKVAAMGPVSAE 45
>POMBASE|SPCC550.15c [details] [associations]
symbol:SPCC550.15c "ribosome biogenesis protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005829
"cytosol" evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=ISO]
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 SMART:SM00451
PomBase:SPCC550.15c GO:GO:0005829 EMBL:CU329672 GO:GO:0046872
GO:GO:0008270 GO:GO:0006913 GO:GO:0003676 GO:GO:0042273 KO:K14816
eggNOG:NOG253541 HOGENOM:HOG000183078 OrthoDB:EOG47DDR3 PIR:T41390
RefSeq:NP_588107.1 ProteinModelPortal:O59811 STRING:O59811
EnsemblFungi:SPCC550.15c.1 GeneID:2539563 KEGG:spo:SPCC550.15c
OMA:REDINDR NextBio:20800723 Uniprot:O59811
Length = 463
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C+TC +A+ + H+KSDWH +NLKRK LPPL+ E
Sbjct: 7 CTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAE 46
>ZFIN|ZDB-GENE-050927-1 [details] [associations]
symbol:znf622 "zinc finger protein 622" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
ZFIN:ZDB-GENE-050927-1 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
InterPro:IPR022755 Pfam:PF12171 HOGENOM:HOG000183078
HOVERGEN:HBG056035 UniGene:Dr.77202 EMBL:BC055386 IPI:IPI00618064
UniGene:Dr.77104 STRING:Q7T1D6 InParanoid:Q7T1D6
ArrayExpress:Q7T1D6 Uniprot:Q7T1D6
Length = 471
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 278 TEGKVKQNKCSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
+ ++ C +C D + R H+K+DWH++NLKRK +PP+T E
Sbjct: 16 SNNQIMSYTCISCRVQFSDGEVQRAHYKTDWHRYNLKRKVADMPPVTAE 64
>UNIPROTKB|F1N194 [details] [associations]
symbol:ZNF622 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0033674 "positive regulation of kinase
activity" evidence=IEA] [GO:0008631 "intrinsic apoptotic signaling
pathway in response to oxidative stress" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
SMART:SM00451 GO:GO:0005794 GO:GO:0005730 GO:GO:0008270
GO:GO:0046330 GO:GO:0003676 GO:GO:0043065 InterPro:IPR022755
Pfam:PF12171 GO:GO:0008631 GO:GO:0033674
GeneTree:ENSGT00390000018047 OMA:SATYCTV EMBL:DAAA02051075
IPI:IPI00698899 UniGene:Bt.29313 Ensembl:ENSBTAT00000021860
Uniprot:F1N194
Length = 470
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C+TC A + DA+ R H+K+DWH++NL+RK + P+++E
Sbjct: 6 CNTCRAVLEDAEAQRVHYKTDWHRYNLRRKVAGMAPVSLE 45
>RGD|1309146 [details] [associations]
symbol:Zfp622 "zinc finger protein 622" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008631 "intrinsic apoptotic signaling pathway in
response to oxidative stress" evidence=ISO] [GO:0033674 "positive
regulation of kinase activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043410
"positive regulation of MAPK cascade" evidence=ISO] [GO:0046330
"positive regulation of JNK cascade" evidence=ISO]
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR015880
SMART:SM00355 SMART:SM00451 RGD:1309146 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 InterPro:IPR022755
Pfam:PF12171 OrthoDB:EOG48WC23 UniGene:Rn.162560 HOVERGEN:HBG056035
EMBL:AY310142 EMBL:AY321329 IPI:IPI00372151 UniGene:Rn.111017
ProteinModelPortal:Q7TM96 PRIDE:Q7TM96 UCSC:RGD:1309146
InParanoid:Q7TM96 ArrayExpress:Q7TM96 Genevestigator:Q7TM96
GermOnline:ENSRNOG00000010589 Uniprot:Q7TM96
Length = 386
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA+ R H+K+DWH++NL+RK + P+T E
Sbjct: 6 CITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAE 45
>UNIPROTKB|F1LQ57 [details] [associations]
symbol:Fam134b "Protein FAM134B" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008631 "intrinsic apoptotic signaling pathway in response to
oxidative stress" evidence=IEA] [GO:0033674 "positive regulation of
kinase activity" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0046330 "positive regulation
of JNK cascade" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
RGD:1565003 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
InterPro:IPR022755 Pfam:PF12171 EMBL:AC113901 IPI:IPI00948999
Ensembl:ENSRNOT00000066879 ArrayExpress:F1LQ57 Uniprot:F1LQ57
Length = 475
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 287 CSTCNAYVGDAKQYRDHFKSDWHKHNLKRKTRQLPPLTVE 326
C TC DA+ R H+K+DWH++NL+RK + P+T E
Sbjct: 6 CITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAE 45
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 346 346 0.00098 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 612 (65 KB)
Total size of DFA: 237 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.71u 0.14s 35.85t Elapsed: 00:00:01
Total cpu time: 35.71u 0.14s 35.85t Elapsed: 00:00:01
Start: Mon May 20 18:02:06 2013 End: Mon May 20 18:02:07 2013