Query 042020
Match_columns 538
No_of_seqs 273 out of 875
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 22:50:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 6.8E-30 2.3E-34 253.5 7.9 225 2-288 29-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 2.8E-29 9.4E-34 252.3 9.5 230 2-293 30-268 (279)
3 3htm_A Speckle-type POZ protei 99.8 2.6E-21 8.9E-26 179.5 11.7 118 2-139 32-149 (172)
4 2vkp_A BTB/POZ domain-containi 99.8 2.9E-21 9.9E-26 166.9 10.6 100 2-113 6-109 (109)
5 4eoz_A Speckle-type POZ protei 99.8 8.2E-22 2.8E-26 178.0 5.8 118 2-139 23-140 (145)
6 2if5_A Zinc finger and BTB dom 99.8 3.9E-21 1.3E-25 169.2 10.0 98 2-110 23-120 (120)
7 1r29_A B-cell lymphoma 6 prote 99.8 1E-20 3.5E-25 168.3 10.6 98 2-111 27-125 (127)
8 3b84_A Zinc finger and BTB dom 99.8 5.9E-21 2E-25 168.6 8.1 96 2-112 22-117 (119)
9 2z8h_A Transcription regulator 99.8 1.5E-20 5.2E-25 170.1 10.1 102 2-116 34-136 (138)
10 2vpk_A Myoneurin; transcriptio 99.8 1.9E-20 6.6E-25 164.0 9.9 95 2-111 20-116 (116)
11 1buo_A POZ domain, protein (pr 99.8 2.9E-20 9.8E-25 164.5 11.0 95 2-112 26-120 (121)
12 2yy9_A Zinc finger and BTB dom 99.8 1E-20 3.5E-25 170.9 6.9 98 2-114 23-120 (135)
13 2ppi_A Gigaxonin; BTB domain, 99.8 1.6E-20 5.3E-25 171.8 7.6 98 2-110 45-144 (144)
14 3ohu_A Transcription regulator 99.8 1.1E-20 3.8E-25 167.7 6.1 95 2-109 30-125 (125)
15 3ga1_A Nucleus accumbens-assoc 99.8 2.1E-20 7.1E-25 167.2 7.2 96 2-112 31-127 (129)
16 2ihc_A Transcription regulator 99.8 2.4E-20 8.3E-25 165.8 7.0 96 2-110 27-123 (124)
17 2q81_A MIZ-1 protein; BTB/POZ 99.8 3.7E-20 1.3E-24 163.4 7.0 93 2-110 25-117 (119)
18 3m5b_A Zinc finger and BTB dom 99.8 8.3E-20 2.8E-24 162.1 6.7 90 2-111 28-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 5.3E-19 1.8E-23 179.8 11.4 118 2-139 172-289 (312)
20 3fkc_A Transcriptional regulat 99.7 6.7E-18 2.3E-22 148.7 8.8 83 2-93 29-112 (116)
21 2ast_A S-phase kinase-associat 99.5 6.7E-14 2.3E-18 130.3 9.8 98 7-115 3-128 (159)
22 4ajy_C Transcription elongatio 99.3 3.2E-12 1.1E-16 109.5 8.8 83 6-91 3-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 1.1E-10 3.9E-15 106.5 7.6 94 7-115 4-123 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 1.4E-10 4.8E-15 108.1 0.8 95 7-115 6-127 (160)
25 1hv2_A Elongin C, ELC1; protei 98.5 2.5E-07 8.7E-12 79.4 8.8 81 6-91 5-99 (99)
26 2fnj_C Transcription elongatio 98.5 2.1E-07 7.2E-12 79.5 7.6 81 7-91 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.4 7.7E-07 2.6E-11 83.6 9.4 99 5-113 7-133 (169)
28 1vcb_B Protein (elongin C); tu 98.0 1.7E-05 5.8E-10 69.6 7.8 83 6-91 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.5 0.00037 1.3E-08 60.3 9.4 94 6-111 7-106 (107)
30 2eqx_A Kelch repeat and BTB do 96.5 0.00047 1.6E-08 59.2 0.6 89 124-250 10-98 (105)
31 3drx_A BTB/POZ domain-containi 95.4 0.027 9.3E-07 54.1 6.9 93 7-111 14-112 (202)
32 3kvt_A Potassium channel prote 94.8 0.016 5.4E-07 50.9 3.2 85 5-94 5-92 (115)
33 1s1g_A Potassium voltage-gated 93.1 0.079 2.7E-06 47.0 4.4 87 6-106 14-105 (124)
34 1nn7_A Potassium channel KV4.2 92.2 0.065 2.2E-06 46.1 2.4 86 7-106 2-92 (105)
35 2nz0_B Potassium voltage-gated 91.1 0.1 3.5E-06 47.2 2.7 81 6-94 36-121 (140)
36 1t1d_A Protein (potassium chan 89.4 0.29 9.8E-06 41.7 3.9 84 7-94 3-89 (100)
37 3vmx_A Voltage-gated hydrogen 82.0 1.6 5.6E-05 32.3 4.1 34 488-521 6-39 (48)
38 2yy0_A C-MYC-binding protein; 79.5 2.7 9.4E-05 31.7 4.8 34 485-518 18-51 (53)
39 1pd7_B MAD1; PAH2, SIN3, eukar 71.3 1.4 4.7E-05 28.4 1.0 17 77-93 3-19 (26)
40 3a2a_A Voltage-gated hydrogen 69.1 6.1 0.00021 30.0 4.3 34 488-521 13-46 (58)
41 1deb_A APC protein, adenomatou 66.8 7.9 0.00027 28.8 4.4 36 484-519 15-50 (54)
42 3b0b_C CENP-X, centromere prot 64.2 5.7 0.00019 32.6 3.6 44 310-353 5-48 (81)
43 3vp9_A General transcriptional 57.5 9.6 0.00033 32.0 3.9 25 493-517 50-74 (92)
44 4dra_E Centromere protein X; D 57.2 6.1 0.00021 32.7 2.6 45 309-353 8-52 (84)
45 1vjh_A BET V I allergen family 51.1 11 0.00037 32.7 3.4 33 352-395 90-122 (122)
46 2eqx_A Kelch repeat and BTB do 42.6 14 0.00048 30.8 2.8 37 70-113 4-40 (105)
47 1dip_A Delta-sleep-inducing pe 35.7 42 0.0014 27.0 4.2 34 483-516 12-45 (78)
48 2r9r_B Paddle chimera voltage 32.8 34 0.0012 36.8 4.5 84 7-94 54-140 (514)
49 3v9r_B MHF2, uncharacterized p 32.6 17 0.00057 30.2 1.5 38 316-353 4-41 (88)
50 3htm_A Speckle-type POZ protei 30.3 51 0.0017 28.9 4.6 45 58-113 120-164 (172)
51 1use_A VAsp, vasodilator-stimu 27.6 69 0.0023 23.3 3.8 11 490-500 19-29 (45)
52 2xv5_A Lamin-A/C; structural p 23.0 92 0.0031 24.8 4.3 12 487-498 20-31 (74)
53 1ci6_A Transcription factor AT 22.2 1.1E+02 0.0036 23.5 4.3 33 485-517 29-61 (63)
54 2yy0_A C-MYC-binding protein; 21.2 76 0.0026 23.7 3.2 27 483-509 23-49 (53)
55 1uuj_A Platelet-activating fac 20.9 36 0.0012 28.2 1.5 24 495-518 60-83 (88)
56 2wt7_B Transcription factor MA 20.7 1.1E+02 0.0037 25.4 4.4 36 484-519 53-88 (90)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=6.8e-30 Score=253.47 Aligned_cols=225 Identities=14% Similarity=0.061 Sum_probs=166.2
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCC--CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNG--STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNI 79 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~--e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV 79 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||++++. ++....|.|++++ +++|+.+++|+|| |++.++.+||
T Consensus 29 ~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt-~~~~i~~~~v 104 (256)
T 3hve_A 29 SRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFS-GQIRLNEDTI 104 (256)
T ss_dssp -CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHH-SCCCCC-CCH
T ss_pred CCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccC-CCCcccHhHH
Confidence 4689999999 7899999999999999999999998765 5566789999998 8999999999999 8999999999
Q ss_pred HhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCchhhHHHHHhcccchHhhhhhhCchhhhHHHHHHHHhhcccCCC
Q 042020 80 VLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWTWPELLVALKQCQVLLPTTDYLFVPEKVLSGLVERIALSFVASP 159 (538)
Q Consensus 80 ~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~sw~~~la~L~~C~~l~~~Ae~~~iv~rci~sLa~ka~~~~~~s~ 159 (538)
..++.||++|||++ |.+.|++||.+.+.+ .||..++.+|+.|++ +.|..++....
T Consensus 105 ~~ll~~A~~l~i~~-------l~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~-----~~L~~~~~~~i---- 159 (256)
T 3hve_A 105 QDVVQAADLLLLTD-------LKTLCCEFLEGCIAA---------ENCIGIRDFALHYCL-----HHVHYLATEYL---- 159 (256)
T ss_dssp HHHHHHHHHHTCHH-------HHHHHHHHHHHTCCS---------STTHHHHHHHHHTTC-----HHHHHHHHHHH----
T ss_pred HHHHHHHHHHChHH-------HHHHHHHHHHhhCCH---------hhHHHHHHHHHHcCc-----HHHHHHHHHHH----
Confidence 99999999999997 999999999998854 588888999999876 55555543321
Q ss_pred CccCCCCCCccccccCCCcccccccccccCCccchhhcccCChhHHHHHHHHHhhcCCChHHHHHHHHhhhhhcCCCcch
Q 042020 160 YTSFSGYFNSTFQFSGDTERCDSLMNICRQRRWWFEDLMFLNVDFVDKVSKMMITQNFEHDLICKFLLHYRKSRFCSASQ 239 (538)
Q Consensus 160 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d~~~rvI~am~~~g~~~e~I~~aL~~Yak~~l~~~~~ 239 (538)
..+| ...+-.++|..|+.+.+..+++...-...+|+.|+++++.|+++..+.+ .
T Consensus 160 ----------~~~f---------------~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R-~ 213 (256)
T 3hve_A 160 ----------ETHF---------------RDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIR-K 213 (256)
T ss_dssp ----------HHHH---------------HHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCS-T
T ss_pred ----------HHHH---------------HHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHH-H
Confidence 0112 0112257899999999888887766655578899999999999875532 3
Q ss_pred HHHhHHHHHHHHhhcccCCCCCChhhHHHHHHHhhhcccC-HHHHHHHHH
Q 042020 240 VEKCKMTEVVINLLSLLDRSTPSCKSLFNIFHVALSLKIS-RIYRKKLES 288 (538)
Q Consensus 240 ~~~r~LLE~Vv~lLp~~~~~~vs~~fL~~LLr~a~~l~as-~~cr~~LE~ 288 (538)
.....|++.|+ .+.+|+.||.+.++...++..+ +.|+..|++
T Consensus 214 ~~~~~ll~~VR-------f~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 214 VHMKDVMSALW-------VSGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp TTHHHHHHHHH-------HHTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred HHHHHHHHhCC-------CCCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 34568999995 3679999999999999999998 789998875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.95 E-value=2.8e-29 Score=252.32 Aligned_cols=230 Identities=13% Similarity=0.145 Sum_probs=179.1
Q ss_pred CcceeEEEEecC---ceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEec------CCCCCHHHHHHHHHHHhhcCee
Q 042020 2 EVCCDLEVDVNG---EETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFH------DFPGGAEGFELIARYCYSLGKI 72 (538)
Q Consensus 2 ~~~~Dv~i~V~g---~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~------~~pgG~e~felv~~FcY~~~~i 72 (538)
+.+|||+|.| | |.+|++||.+|+++|+||++||++++.|+....|+|+ +++ +++|+.+++|+|| |++
T Consensus 30 ~~~~Dv~l~v-~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~~~Yt-g~~ 105 (279)
T 3i3n_A 30 GLFCDITLCF-GGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIEYMYT-GRI 105 (279)
T ss_dssp TTTCCEEEEC-C----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHHHHHH-SEE
T ss_pred CCCCCeEEEE-cCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHHhhCc-CCc
Confidence 4689999999 6 8899999999999999999999998888888899998 666 8999999999999 999
Q ss_pred eechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCchhhHHHHHhcccchHhhhhhhCchhhhHHHHHHHHh
Q 042020 73 KITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWTWPELLVALKQCQVLLPTTDYLFVPEKVLSGLVERIA 152 (538)
Q Consensus 73 ~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~sw~~~la~L~~C~~l~~~Ae~~~iv~rci~sLa~ka~ 152 (538)
.++.+||..|+.||++|||++ |.+.|++||.+.+.. .||..++.+|+.|++ +.|..++.
T Consensus 106 ~i~~~~v~~ll~~A~~l~i~~-------L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~-----~~L~~~~~ 164 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRFLLIR-------LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTL-----SQLALKAA 164 (279)
T ss_dssp EEETTTHHHHHHHHHHTTCHH-------HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTC-----HHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHCcHH-------HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCc-----HHHHHHHH
Confidence 999999999999999999996 999999999998844 688889999999886 55555544
Q ss_pred hcccCCCCccCCCCCCccccccCCCcccccccccccCCccchhhcccCChhHHHHHHHHHhhcCCChHHHHHHHHhhhhh
Q 042020 153 LSFVASPYTSFSGYFNSTFQFSGDTERCDSLMNICRQRRWWFEDLMFLNVDFVDKVSKMMITQNFEHDLICKFLLHYRKS 232 (538)
Q Consensus 153 ~~~~~s~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d~~~rvI~am~~~g~~~e~I~~aL~~Yak~ 232 (538)
... ..+| ...+-.++|..|+.+.+..+++...-...+|+.|+++++.|+++
T Consensus 165 ~~i--------------~~~f---------------~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 165 DMI--------------RRNF---------------HKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQR 215 (279)
T ss_dssp HHH--------------HHTH---------------HHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHT
T ss_pred HHH--------------HHHH---------------HHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHc
Confidence 321 0112 11123578999999997777776555555799999999999997
Q ss_pred cCCCcchHHHhHHHHHHHHhhcccCCCCCChhhHHHHHHHhhhcccCHHHHHHHHHHHhcc
Q 042020 233 RFCSASQVEKCKMTEVVINLLSLLDRSTPSCKSLFNIFHVALSLKISRIYRKKLESLIGSQ 293 (538)
Q Consensus 233 ~l~~~~~~~~r~LLE~Vv~lLp~~~~~~vs~~fL~~LLr~a~~l~as~~cr~~LE~rIg~q 293 (538)
..+. +...-..|++.|+ .+.+|+.+|...++...++..++.|+..|.+...-+
T Consensus 216 ~~~~-r~~~~~~ll~~VR-------f~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~ 268 (279)
T 3i3n_A 216 NAEE-RERYFEELFKLLR-------LSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERH 268 (279)
T ss_dssp THHH-HTTTHHHHHTTSC-------GGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHHHHhcC-------CCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhc
Confidence 6431 1112235666653 578999999999999999999999999998876544
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=179.54 Aligned_cols=118 Identities=21% Similarity=0.148 Sum_probs=108.0
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| |++.|++||.+|+++|+||++||.+++.++....|.|++++ +++|+.+++|+|| |++.++++|+..
T Consensus 32 ~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt-~~~~~~~~~~~~ 107 (172)
T 3htm_A 32 SRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYT-GKAPNLDKMADD 107 (172)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHH-SCCTTGGGTHHH
T ss_pred CCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhC-CCCCCcHHHHHH
Confidence 3689999999 78899999999999999999999988888878899999998 8999999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCchhhHHHHHhcccchHhhhhhhCc
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWTWPELLVALKQCQVLLPTTDYLFV 139 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~sw~~~la~L~~C~~l~~~Ae~~~i 139 (538)
|+.+|++++|++ |.+.|+.||.+.+.. .||..++.+|+.|++
T Consensus 108 ll~~A~~~~~~~-------l~~~c~~~l~~~l~~---------~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 108 LLAAADKYALER-------LKVMCEDALCSNLSV---------ENAAEILILADLHSA 149 (172)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHHHHHTCCT---------TTHHHHHHHHHHTTC
T ss_pred HHHHHHHhCcHH-------HHHHHHHHHHHhCCH---------HHHHHHHHHHHHhCc
Confidence 999999999996 999999999998844 577777788888765
No 4
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.85 E-value=2.9e-21 Score=166.86 Aligned_cols=100 Identities=24% Similarity=0.292 Sum_probs=88.3
Q ss_pred CcceeEEEEecCc----eeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechh
Q 042020 2 EVCCDLEVDVNGE----ETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITAS 77 (538)
Q Consensus 2 ~~~~Dv~i~V~g~----~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~ 77 (538)
+.+|||+|.| |+ +.|++||.+|+++|+||++||++++.|+. ..|.|++++ +++|+.+++|+|| |++.++++
T Consensus 6 ~~~~Dv~l~v-~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt-~~~~~~~~ 80 (109)
T 2vkp_A 6 ELMADVHFVV-GPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYS-DEIDLEAD 80 (109)
T ss_dssp CTTCCEEEEE-SSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHH-CCCCCCTT
T ss_pred CCcccEEEEE-CCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcC-CCccCCHH
Confidence 4789999999 55 89999999999999999999998887777 889999998 8999999999999 89999999
Q ss_pred hHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhh
Q 042020 78 NIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEIS 113 (538)
Q Consensus 78 NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v 113 (538)
||..|+.+|++++|++ |.+.|++||.+.+
T Consensus 81 ~~~~ll~~A~~~~~~~-------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPA-------LAKACVNFLETSL 109 (109)
T ss_dssp THHHHHHHHHHTTCHH-------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcHH-------HHHHHHHHHHhhC
Confidence 9999999999999996 9999999998753
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.84 E-value=8.2e-22 Score=177.99 Aligned_cols=118 Identities=21% Similarity=0.169 Sum_probs=90.0
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||++++.++....|.|++++ +++|+.+++|+|| |++.++.+|+..
T Consensus 23 ~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~-~~~~~~~~~~~~ 98 (145)
T 4eoz_A 23 SRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYT-GKAPNLDKMADD 98 (145)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHH-SCCTTGGGTHHH
T ss_pred CCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhcc-CccCCcHHHHHH
Confidence 3689999999 78899999999999999999999987766666789999998 8999999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCchhhHHHHHhcccchHhhhhhhCc
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWTWPELLVALKQCQVLLPTTDYLFV 139 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~sw~~~la~L~~C~~l~~~Ae~~~i 139 (538)
|+.+|++++|++ |.+.|+.||.+.+ ...||..++.+|+.|++
T Consensus 99 ll~~A~~~~~~~-------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 99 LLAAADKYALER-------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHTTCHH-------HHHHHHCC-------------------------------
T ss_pred HHHHHHHhCHHH-------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 999999999997 9999999999988 45799999999999975
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.84 E-value=3.9e-21 Score=169.24 Aligned_cols=98 Identities=20% Similarity=0.324 Sum_probs=88.4
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| |+++|++||.+|+++|+||++||++++.++....|+|++++ +++|+.+++|+|| |++.++++|+..
T Consensus 23 ~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt-~~~~~~~~~~~~ 98 (120)
T 2if5_A 23 GLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYT-ATLTVSTANVGD 98 (120)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHH-SCCCCCGGGHHH
T ss_pred CCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcC-CCCccCHHHHHH
Confidence 4689999999 78999999999999999999999988888778899999998 8899999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHH
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLE 110 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~ 110 (538)
|+.||++++|++ |++.|++||+
T Consensus 99 ll~~A~~~~i~~-------L~~~C~~~L~ 120 (120)
T 2if5_A 99 ILSAARLLEIPA-------VSHVCADLLD 120 (120)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHHHC
T ss_pred HHHHHHHhCCHH-------HHHHHHHHhC
Confidence 999999999997 9999999984
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=1e-20 Score=168.34 Aligned_cols=98 Identities=20% Similarity=0.440 Sum_probs=91.9
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEe-cCCCCCHHHHHHHHHHHhhcCeeeechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIF-HDFPGGAEGFELIARYCYSLGKIKITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L-~~~pgG~e~felv~~FcY~~~~i~it~~NV~ 80 (538)
+.+|||+|.| |+++|++||.+|+++|+||++||.+++.+ ....|.| ++++ +++|+.+++|+|| |++.++++||.
T Consensus 27 ~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Yt-g~~~~~~~~~~ 101 (127)
T 1r29_A 27 DILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYT-SRLNLREGNIM 101 (127)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHH-SCCCCCTTTHH
T ss_pred CCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcC-CCcCcCHHHHH
Confidence 4689999999 78899999999999999999999988777 6678999 8998 8999999999999 89999999999
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHHHH
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSLEE 111 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~ 111 (538)
.|+.||++|+|++ |.+.|+.||.+
T Consensus 102 ~ll~~A~~~~i~~-------L~~~c~~~l~~ 125 (127)
T 1r29_A 102 AVMATAMYLQMEH-------VVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHTTCHH-------HHHHHHHHHHT
T ss_pred HHHHHHHHhCCHH-------HHHHHHHHHHh
Confidence 9999999999996 99999999975
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.83 E-value=5.9e-21 Score=168.58 Aligned_cols=96 Identities=24% Similarity=0.304 Sum_probs=87.2
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||++|++||.+|+++|+||++||.+++ ...|+|++++ +++|+.+++|+|| |++.++++||..
T Consensus 22 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYt-g~~~~~~~~v~~ 93 (119)
T 3b84_A 22 GQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYT-GHLALTSGNRDQ 93 (119)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHH-SCCCCCTTTHHH
T ss_pred CCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcC-CCCccCHHHHHH
Confidence 4689999999 788999999999999999999998754 4579999998 8899999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHh
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEI 112 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~ 112 (538)
|+.||++|+|++ |.+.|++||.+.
T Consensus 94 ll~~A~~~~i~~-------L~~~C~~~l~~~ 117 (119)
T 3b84_A 94 VLLAARELRVPE-------AVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHCC---
T ss_pred HHHHHHHhCcHH-------HHHHHHHHHHHc
Confidence 999999999996 999999999763
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=1.5e-20 Score=170.09 Aligned_cols=102 Identities=21% Similarity=0.374 Sum_probs=92.7
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEec-CCCCCHHHHHHHHHHHhhcCeeeechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFH-DFPGGAEGFELIARYCYSLGKIKITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~-~~pgG~e~felv~~FcY~~~~i~it~~NV~ 80 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.+.+.+ ...|.++ +++ +++|+.+++|+|| |++.++.+||.
T Consensus 34 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~v~--~~~~~~lL~~~Yt-g~~~i~~~~v~ 107 (138)
T 2z8h_A 34 DVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDA--ELTVTLPEEVT--VKGFEPLIQFAYT-AKLILSKDNVD 107 (138)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCT--TEEEECCTTSC--HHHHHHHHHHHHH-SCCCCCTTTHH
T ss_pred CCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCC--CceEEeCCCCC--HHHHHHHHHHhcC-CCcccCHHHHH
Confidence 4689999999 78899999999999999999999987654 3578885 888 8899999999999 89999999999
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCc
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWT 116 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~s 116 (538)
.|+.||++|||++ |++.|++||.+.+..+
T Consensus 108 ~ll~~A~~~~i~~-------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 108 EVCRCVEFLSVHN-------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp HHHHHHHHHTCGG-------GHHHHHHHTTCCCSCC
T ss_pred HHHHHHHHhCCHH-------HHHHHHHHHHHhcccc
Confidence 9999999999997 9999999999887553
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.9e-20 Score=164.03 Aligned_cols=95 Identities=23% Similarity=0.513 Sum_probs=86.3
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEec--CCCCCHHHHHHHHHHHhhcCeeeechhhH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFH--DFPGGAEGFELIARYCYSLGKIKITASNI 79 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~--~~pgG~e~felv~~FcY~~~~i~it~~NV 79 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.++ ....|.|+ +++ +++|+.+++|+|| |++.++++||
T Consensus 20 ~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~--~~~f~~ll~~~Yt-~~~~~~~~~v 91 (116)
T 2vpk_A 20 GFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVK--ADGFQKLLEFIYT-GTLNLDSWNV 91 (116)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCC--HHHHHHHHHHHHH-SCCCCCTTTH
T ss_pred CCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCC--HHHHHHHHHHHcC-CCcccCHHHH
Confidence 4689999999 78899999999999999999999875 24467777 888 8899999999999 8999999999
Q ss_pred HhHHHHHhhhcccCCCCCcchHHHHHHHHHHH
Q 042020 80 VLLSCAARFMEMGGDGHGNLNLIDQIEKSLEE 111 (538)
Q Consensus 80 ~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~ 111 (538)
..|+.||++|||++ |++.|++||.+
T Consensus 92 ~~ll~~A~~~~i~~-------L~~~C~~~l~~ 116 (116)
T 2vpk_A 92 KEIHQAADYLKVEE-------VVTKCKIKMED 116 (116)
T ss_dssp HHHHHHHHHTTCHH-------HHHHHHHHHC-
T ss_pred HHHHHHHHHhCCHH-------HHHHHHHHHhC
Confidence 99999999999996 99999999963
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.82 E-value=2.9e-20 Score=164.46 Aligned_cols=95 Identities=26% Similarity=0.377 Sum_probs=88.3
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||++|++||.+|+++|+||++||+++ ...|+|++++ +++|+.+++|+|| |++.++++|+..
T Consensus 26 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~--~~~f~~ll~~~Yt-g~~~~~~~~~~~ 96 (121)
T 1buo_A 26 GTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLS--PKTFQQILEYAYT-ATLQAKAEDLDD 96 (121)
T ss_dssp TTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHHH-SCCCCCGGGHHH
T ss_pred CCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCC--HHHHHHHHHhhcC-CCcCCCHHHHHH
Confidence 4689999999 78899999999999999999999863 3579999998 8999999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHh
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEI 112 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~ 112 (538)
|+.||++|+|++ |.+.|++||.+.
T Consensus 97 ll~~A~~~~i~~-------L~~~c~~~l~~~ 120 (121)
T 1buo_A 97 LLYAAEILEIEY-------LEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHTCHH-------HHHHHHHHHHHH
T ss_pred HHHHHHHHCCHH-------HHHHHHHHHHHh
Confidence 999999999996 999999999874
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.82 E-value=1e-20 Score=170.91 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=85.8
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| |+++|++||.+|+++|+||++||.+++ ...|+|++++ +++|+.+++|+|| |++.++.+||..
T Consensus 23 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYt-g~~~i~~~~v~~ 94 (135)
T 2yy9_A 23 GQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYT-GHLALTSGNRDQ 94 (135)
T ss_dssp TTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHH-SCCCCCTTTHHH
T ss_pred CCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhC-CCCCCCHHHHHH
Confidence 4689999999 788999999999999999999998754 4579999998 8999999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHhhc
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEISY 114 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~ 114 (538)
|+.||++|||++ |++.|++||.+.+.
T Consensus 95 ll~~A~~l~i~~-------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 95 VLLAAKELRVPE-------AVELCQSFQPQTSV 120 (135)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHCCC----
T ss_pred HHHHHHHhCcHH-------HHHHHHHHHHHhcc
Confidence 999999999996 99999999988663
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=171.80 Aligned_cols=98 Identities=22% Similarity=0.240 Sum_probs=87.9
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCC--CCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGS--TSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNI 79 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e--~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV 79 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.+++.+ +....|.|++++ +++|+.+++|+|| |++.++.+||
T Consensus 45 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYt-g~~~i~~~~v 120 (144)
T 2ppi_A 45 SRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFS-GQIRLNEDTI 120 (144)
T ss_dssp -CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTT-SCCCCCTTTH
T ss_pred CCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhC-CCCCCCHHHH
Confidence 4689999999 78899999999999999999999876654 456789999998 8999999999999 8999999999
Q ss_pred HhHHHHHhhhcccCCCCCcchHHHHHHHHHH
Q 042020 80 VLLSCAARFMEMGGDGHGNLNLIDQIEKSLE 110 (538)
Q Consensus 80 ~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~ 110 (538)
..|+.||++|+|++ |++.|++||.
T Consensus 121 ~~ll~~A~~l~i~~-------L~~~C~~~L~ 144 (144)
T 2ppi_A 121 QDVVQAADLLLLTD-------LKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHHTTCHH-------HHHHHHTTC-
T ss_pred HHHHHHHHHhCcHH-------HHHHHHHHhC
Confidence 99999999999997 9999999974
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.81 E-value=1.1e-20 Score=167.65 Aligned_cols=95 Identities=25% Similarity=0.427 Sum_probs=87.0
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecC-CCCCHHHHHHHHHHHhhcCeeeechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHD-FPGGAEGFELIARYCYSLGKIKITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~-~pgG~e~felv~~FcY~~~~i~it~~NV~ 80 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.+.+.+ ...|.+++ ++ +++|+.+++|+|| |++.++.+||.
T Consensus 30 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~--~~~f~~~l~~iYt-g~~~~~~~~v~ 103 (125)
T 3ohu_A 30 DILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVT--ARGFGPLLQFAYT-AKLLLSRENIR 103 (125)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCC--HHHHHHHHHHHTT-SEEEECTTTHH
T ss_pred CCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCC--HHHHHHHHHhHcC-CceEECHHHHH
Confidence 4689999999 78899999999999999999999987654 56899988 88 8999999999999 99999999999
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHH
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSL 109 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL 109 (538)
.|+.||++|+|.+ |.+.|++||
T Consensus 104 ~ll~~A~~l~i~~-------L~~~C~~~L 125 (125)
T 3ohu_A 104 EVIRCAEFLRMHN-------LEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHTBSS-------CTTSSCCCC
T ss_pred HHHHHHHHhCCHH-------HHHHHHHhC
Confidence 9999999999997 888888775
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.81 E-value=2.1e-20 Score=167.16 Aligned_cols=96 Identities=22% Similarity=0.466 Sum_probs=82.1
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEec-CCCCCHHHHHHHHHHHhhcCeeeechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFH-DFPGGAEGFELIARYCYSLGKIKITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~-~~pgG~e~felv~~FcY~~~~i~it~~NV~ 80 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.+. ....|+|+ +++ +++|+.+++|+|| |++.++.+||.
T Consensus 31 ~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYt-g~~~i~~~~~~ 102 (129)
T 3ga1_A 31 GLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYT-GRLSMNVGDQD 102 (129)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHH-SEEECCTTTHH
T ss_pred CCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhC-CccccCHHHHH
Confidence 4689999999 78999999999999999999999865 45689997 898 8999999999999 99999999999
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHHHHh
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSLEEI 112 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~ 112 (538)
.|+.||++|||++ |++.|++||.+.
T Consensus 103 ~ll~~A~~~~i~~-------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 103 LLMYTAGFLQIQE-------IMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHTTBTT-------SSCC--------
T ss_pred HHHHHHHHhCCHH-------HHHHHHHHHHHh
Confidence 9999999999997 999999999874
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=165.78 Aligned_cols=96 Identities=20% Similarity=0.431 Sum_probs=85.4
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEec-CCCCCHHHHHHHHHHHhhcCeeeechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFH-DFPGGAEGFELIARYCYSLGKIKITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~-~~pgG~e~felv~~FcY~~~~i~it~~NV~ 80 (538)
+.+|||+|.| ||++|++||.+|+++|+||++||++++.+ ...|.++ +++ +++|+.+++|+|| |++.++++||.
T Consensus 27 ~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e--~~~i~l~~~v~--~~~f~~lL~~iYt-g~~~i~~~~v~ 100 (124)
T 2ihc_A 27 DVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADG--ELNITLPEEVT--VKGFEPLIQFAYT-AKLILSKENVD 100 (124)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC-----CEEEECCTTSC--HHHHHHHHHHHHH-SEEEEETTTHH
T ss_pred CCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCC--CceEeecCCcC--HHHHHHHHHHhcC-CCcccCHHHHH
Confidence 4689999999 78899999999999999999999987654 3578884 888 8899999999999 89999999999
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHHH
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSLE 110 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~ 110 (538)
.|+.||++|||++ |++.|++||.
T Consensus 101 ~ll~~A~~~~~~~-------L~~~C~~~l~ 123 (124)
T 2ihc_A 101 EVCKCVEFLSVHN-------IEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHTBSS-------CCGGGGGTC-
T ss_pred HHHHHHHHHCCHH-------HHHHHHHHHh
Confidence 9999999999997 9999999875
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=3.7e-20 Score=163.43 Aligned_cols=93 Identities=23% Similarity=0.327 Sum_probs=85.4
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||++. ...|.+++++ +++|+.+++|+|| |++.++++||..
T Consensus 25 ~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~--~~~f~~ll~~~Yt-g~~~i~~~~~~~ 95 (119)
T 2q81_A 25 GLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISN--AAGLGQVLEFMYT-AKLSLSPENVDD 95 (119)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCC--HHHHHHHHHHHHH-SCCCCCTTTHHH
T ss_pred CCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHHHcC-CCCccCHHHHHH
Confidence 4689999999 78899999999999999999999863 3467788887 8899999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHH
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLE 110 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~ 110 (538)
|+.||++|+|++ |++.|++||.
T Consensus 96 ll~~A~~l~i~~-------L~~~C~~~l~ 117 (119)
T 2q81_A 96 VLAVATFLQMQD-------IITACHALKS 117 (119)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHHHT
T ss_pred HHHHHHHhCCHH-------HHHHHHHHHh
Confidence 999999999997 9999999985
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=8.3e-20 Score=162.14 Aligned_cols=90 Identities=17% Similarity=0.300 Sum_probs=81.9
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++ ....|+|++++ +++|+.+++|+|| |++.|+.+||..
T Consensus 28 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~--~~~f~~ll~fiYt-g~~~i~~~~v~~ 94 (119)
T 3m5b_A 28 PALCDTLITV-GSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGIS--PSTFAQLLNFVYG-ESVELQPGELRP 94 (119)
T ss_dssp TTTCCEEEEE-TTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCC--HHHHHHHHHHHTT-CCEEECGGGHHH
T ss_pred CCCcceEEEE-CCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCC--HHHHHHHHHHHcC-CCcCcCHHHHHH
Confidence 4789999999 789999999999999999984 23578999998 8999999999999 999999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHH
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEE 111 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~ 111 (538)
|+.||++|||.. |++.|++++.+
T Consensus 95 ll~aA~~l~i~~-------l~~~C~~~~~~ 117 (119)
T 3m5b_A 95 LQEAARALGVQS-------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHHC--
T ss_pred HHHHHHHhCCHH-------HHHHHHHHHhh
Confidence 999999999996 99999999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.78 E-value=5.3e-19 Score=179.79 Aligned_cols=118 Identities=21% Similarity=0.148 Sum_probs=102.7
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeechhhHHh
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITASNIVL 81 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~~NV~~ 81 (538)
+.+|||+|.| ||++|++||.+|+++|+||++||.+.+.|+....|+|++++ +++|+.+++|+|| +++.++.+|+..
T Consensus 172 ~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt-~~~~~~~~~~~~ 247 (312)
T 3hqi_A 172 SRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYT-GKAPNLDKMADD 247 (312)
T ss_dssp TCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHH-SCCTTHHHHHHH
T ss_pred CCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcC-CCCCChHHHHHH
Confidence 4689999999 78899999999999999999999998888888899999998 8999999999999 899999999999
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcCchhhHHHHHhcccchHhhhhhhCc
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYWTWPELLVALKQCQVLLPTTDYLFV 139 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~sw~~~la~L~~C~~l~~~Ae~~~i 139 (538)
|+.||++++|+. |...|+.||.+.+.. .+|..++.+|+.|++
T Consensus 248 ll~~A~~~~~~~-------l~~~c~~~l~~~~~~---------~n~~~~l~~A~~~~~ 289 (312)
T 3hqi_A 248 LLAAADKYALER-------LKVMCEDALCSNLSV---------ENAAEILILADLHSA 289 (312)
T ss_dssp HHHHHHHTTCHH-------HHHHHHHHHHTTCCT---------TTHHHHHHHHHHTTC
T ss_pred HHHHHHHhCHHH-------HHHHHHHHHHccCCH---------HHHHHHHHHHHHhCC
Confidence 999999999996 999999999988743 567777777777754
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=6.7e-18 Score=148.69 Aligned_cols=83 Identities=29% Similarity=0.362 Sum_probs=77.0
Q ss_pred CcceeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCee-eechhhHH
Q 042020 2 EVCCDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKI-KITASNIV 80 (538)
Q Consensus 2 ~~~~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i-~it~~NV~ 80 (538)
+.+|||+|.| ||+.|++||.+|+++|+||++||.++ ...|+|++++ +++|+.+++|+|| |++ .++++||.
T Consensus 29 ~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Yt-g~~~~~~~~~~~ 99 (116)
T 3fkc_A 29 GLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYS-SKIVRVRSDLLD 99 (116)
T ss_dssp TTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTT-SCCCSCCHHHHH
T ss_pred CCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcC-CCcCCCCHHHHH
Confidence 4689999999 78999999999999999999999864 4589999998 8999999999999 899 79999999
Q ss_pred hHHHHHhhhcccC
Q 042020 81 LLSCAARFMEMGG 93 (538)
Q Consensus 81 ~L~cAA~~LqM~e 93 (538)
.|+.||++|||+.
T Consensus 100 ~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 100 ELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHTCHH
T ss_pred HHHHHHHHhCccc
Confidence 9999999999984
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.49 E-value=6.7e-14 Score=130.27 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=84.6
Q ss_pred EEEEecCceeEEchHHHHhhccHHHHHhhcC-CCC-CCCCceEEecCCCCCHHHHHHHHHHHhhcCe-------------
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRFNKLFSG-LNG-STSNLKVIFHDFPGGAEGFELIARYCYSLGK------------- 71 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yfr~lf~~-~~~-e~~~~~v~L~~~pgG~e~felv~~FcY~~~~------------- 71 (538)
|+|...+|+.|.+|+.+ |++|+||+.||.+ +.. ++....|.|++|+ +.+++.|++|||+ .+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~-h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTH-HKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHH-TTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHH-cCcCCCCcccccccc
Confidence 77876578899999999 9999999999987 554 5556689999999 6799999999999 67
Q ss_pred -------------eeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcC
Q 042020 72 -------------IKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYW 115 (538)
Q Consensus 72 -------------i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~ 115 (538)
+.++..|+..|+.||.||+|.. |++.|+.|+...+..
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~-------Lld~~c~~va~~i~g 128 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG-------LLDVTCKTVANMIKG 128 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH-------HHHHHHHHHHHHHSS
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHcC
Confidence 8899999999999999999996 999999999998854
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.32 E-value=3.2e-12 Score=109.52 Aligned_cols=83 Identities=20% Similarity=0.302 Sum_probs=67.3
Q ss_pred eEEEEecCceeEEchHHHHhhccHHHHHhhcC--CCCCCCCceEEecCCCCCHHHHHHHHHHHh-----hc--Ceee---
Q 042020 6 DLEVDVNGEETFMVDKKILASFSGRFNKLFSG--LNGSTSNLKVIFHDFPGGAEGFELIARYCY-----SL--GKIK--- 73 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~--~~~e~~~~~v~L~~~pgG~e~felv~~FcY-----~~--~~i~--- 73 (538)
-|+|+-.+|++|.+||.+ |++|+||++||++ +..|+....|.|++++ +.+++.|++||| +. +.|.
T Consensus 3 ~v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~ 79 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 79 (97)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCc
Confidence 367777678899999999 9999999999987 4455566789999999 689999999999 31 5677
Q ss_pred echhhHHhHHHHHhhhcc
Q 042020 74 ITASNIVLLSCAARFMEM 91 (538)
Q Consensus 74 it~~NV~~L~cAA~~LqM 91 (538)
|+++|+..|+.||+||+.
T Consensus 80 i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 80 IAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCGGGHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHhhhCC
Confidence 999999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.10 E-value=1.1e-10 Score=106.50 Aligned_cols=94 Identities=21% Similarity=0.330 Sum_probs=83.3
Q ss_pred EEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCe---------------
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGK--------------- 71 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~--------------- 71 (538)
|+|+..+|+.|.+|+.+ |..|+||+.||.... ...|.|++++ +.+++.|++|||. .+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~-h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTH-HKDDPPPPEDDENKEKR 75 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHH-HTTCC------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHH-hccCCCccccccccccc
Confidence 78888678899999998 899999999998632 3479999999 6799999999998 45
Q ss_pred -----------eeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcC
Q 042020 72 -----------IKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYW 115 (538)
Q Consensus 72 -----------i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~ 115 (538)
+.++..++..|+.||.||++.. |++.|+.|+...+-.
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~-------Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKG-------LLDVTCKTVANMIKG 123 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHH-------HHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHcC
Confidence 7899999999999999999996 999999999998844
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.93 E-value=1.4e-10 Score=108.08 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=52.5
Q ss_pred EEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCe---------------
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGK--------------- 71 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~--------------- 71 (538)
|+|+..+|+.|.+|+.+ |..|+||+.||.... ....|.|++|+ +.+++.|++|||. .+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~--~~iL~kVieyc~~-h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVT--SKILAKVIEYCKR-HVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSC--HHHHHHHHHC---------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCc--HHHHHHHHHHHHH-cccCCCccccccccccc
Confidence 66766567899999998 899999999998642 23478999999 6799999999998 55
Q ss_pred ------------eeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhhcC
Q 042020 72 ------------IKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEISYW 115 (538)
Q Consensus 72 ------------i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v~~ 115 (538)
+.++..++..|+.||.||+|.. |++.|+.|+...+-.
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~-------Lldl~c~~vA~~ikg 127 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKN-------LLDLTCQTVADMIKG 127 (160)
T ss_dssp ----------------------CHHHHHHTTCHH-------HHHHHHHHHHHTTTT
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHcC
Confidence 5789999999999999999996 999999999998843
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.53 E-value=2.5e-07 Score=79.43 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=68.8
Q ss_pred eEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCCCCCceEEecCCCCCHHHHHHHHHHHhhcCe--------------
Q 042020 6 DLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGSTSNLKVIFHDFPGGAEGFELIARYCYSLGK-------------- 71 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~-------------- 71 (538)
-|++.-.+|+.|.+|+.+ |..|++++.|+..+. +.....|.|++++ +.+++.|++|||.. +
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~--~~iL~kVieyc~~h-~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFD--SHILEKAVEYLNYN-LKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSC--HHHHHHHHHHHHHH-HHHHHHCSSCSSCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcC--HHHHHHHHHHHHHh-cccCCCccccccCCC
Confidence 477877778999999997 899999999998754 4444689999999 67999999999972 2
Q ss_pred eeechhhHHhHHHHHhhhcc
Q 042020 72 IKITASNIVLLSCAARFMEM 91 (538)
Q Consensus 72 i~it~~NV~~L~cAA~~LqM 91 (538)
..+...++..|+.||.||++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 36888999999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.50 E-value=2.1e-07 Score=79.47 Aligned_cols=81 Identities=20% Similarity=0.304 Sum_probs=65.2
Q ss_pred EEEEecCceeEEchHHHHhhccHHHHHhhcCC-C-CCCCCceEEecCCCCCHHHHHHHHHHHhhcCe-----------ee
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRFNKLFSGL-N-GSTSNLKVIFHDFPGGAEGFELIARYCYSLGK-----------IK 73 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~-~-~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~-----------i~ 73 (538)
|++.-.+|+.|.+|+.+ |..|++|+.|+... . .|+....|.|++++ +.+++.|++|||.. + ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h-~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYK-VRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHH-HHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHc-cccCCCcccCCCcc
Confidence 67777678899999997 89999999999863 2 34445689999999 67999999999972 2 36
Q ss_pred echhhHHhHHHHHhhhcc
Q 042020 74 ITASNIVLLSCAARFMEM 91 (538)
Q Consensus 74 it~~NV~~L~cAA~~LqM 91 (538)
+...++..|+.||.||++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.40 E-value=7.7e-07 Score=83.57 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=80.3
Q ss_pred eeEEEEecCceeEEchHHHHhhccHHHHHhhcCCCCC----CCCceEEecCCCCCHHHHHHHHHHHhhcCe---------
Q 042020 5 CDLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGS----TSNLKVIFHDFPGGAEGFELIARYCYSLGK--------- 71 (538)
Q Consensus 5 ~Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e----~~~~~v~L~~~pgG~e~felv~~FcY~~~~--------- 71 (538)
.-|+|+-.+|+.|.+++.+ |..|++++.|+.....+ .....|.|++|+ +.+++.|++|||-...
T Consensus 7 ~~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~ 83 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDD 83 (169)
T ss_dssp CEEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC----
T ss_pred CeEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccc
Confidence 4578887788999999997 88999999999854321 223579999999 6799999999997321
Q ss_pred ---------------eeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhh
Q 042020 72 ---------------IKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEIS 113 (538)
Q Consensus 72 ---------------i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v 113 (538)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 84 ~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~-------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 84 DSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP-------LLDAGCKVVAEMI 133 (169)
T ss_dssp ----CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH-------HHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH-------HHHHHHHHHHHHH
Confidence 3577889999999999999996 9999999998877
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.96 E-value=1.7e-05 Score=69.62 Aligned_cols=83 Identities=19% Similarity=0.290 Sum_probs=64.9
Q ss_pred eEEEEecCceeEEchHHHHhhccHHHHHhhcCCC--CCCCCceEEecCCCCCHHHHHHHHHHHhhcCe----------ee
Q 042020 6 DLEVDVNGEETFMVDKKILASFSGRFNKLFSGLN--GSTSNLKVIFHDFPGGAEGFELIARYCYSLGK----------IK 73 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~--~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~----------i~ 73 (538)
-|+|+-.+|..|.+++. .|..|+.++.|+.... .+.....|.|++|+ +.+++.|++|||-... ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36777667889999999 5789999999998532 23334589999999 6799999999986211 36
Q ss_pred echhhHHhHHHHHhhhcc
Q 042020 74 ITASNIVLLSCAARFMEM 91 (538)
Q Consensus 74 it~~NV~~L~cAA~~LqM 91 (538)
+...++..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.53 E-value=0.00037 Score=60.31 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=71.3
Q ss_pred eEEEEecCceeEEchHHHHhhcc-HHHHHhhcCCCC----CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhH
Q 042020 6 DLEVDVNGEETFMVDKKILASFS-GRFNKLFSGLNG----STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNI 79 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S-~yfr~lf~~~~~----e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV 79 (538)
=|+|.| ||..|...+..|.... .+|.+||..... ......+-+ |-+ |+.|+.|++|..+ |++.+.. -.+
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRd--p~~F~~IL~~lr~-g~l~~p~~~~~ 81 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRH-GKLVINKDLAE 81 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSC--HHHHHHHHHHHHH-SCCCCCTTSCH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCC--hHHHHHHHHHhCC-CeeCCCCCCCH
Confidence 378899 8999999999999886 478999875311 012233443 444 7899999999999 8988743 245
Q ss_pred HhHHHHHhhhcccCCCCCcchHHHHHHHHHHH
Q 042020 80 VLLSCAARFMEMGGDGHGNLNLIDQIEKSLEE 111 (538)
Q Consensus 80 ~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~ 111 (538)
..++..|+|.++++ |++.|++-+.+
T Consensus 82 ~~l~~Ea~fy~l~~-------L~~~l~~~i~~ 106 (107)
T 3drz_A 82 EGVLEEAEFYNITS-------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHHHTCHH-------HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHH-------HHHHHHHHHhc
Confidence 67999999999997 99998876543
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.54 E-value=0.00047 Score=59.19 Aligned_cols=89 Identities=6% Similarity=-0.081 Sum_probs=61.9
Q ss_pred HhcccchHhhhhhhCchhhhHHHHHHHHhhcccCCCCccCCCCCCccccccCCCcccccccccccCCccchhhcccCChh
Q 042020 124 LKQCQVLLPTTDYLFVPEKVLSGLVERIALSFVASPYTSFSGYFNSTFQFSGDTERCDSLMNICRQRRWWFEDLMFLNVD 203 (538)
Q Consensus 124 L~~C~~l~~~Ae~~~iv~rci~sLa~ka~~~~~~s~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~EDl~~L~~d 203 (538)
..||.+++.+|+.|++ ..|..+|.... ..+|. .....++|..||.+
T Consensus 10 ~~NCl~i~~~A~~~~~-----~~L~~~a~~fi--------------~~nF~---------------~v~~~~eFl~L~~~ 55 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSD-----PELYTAAKHCA--------------KTHLA---------------QLQNTEEFLHLPHR 55 (105)
T ss_dssp TTTHHHHHHHHHHTTC-----HHHHHHHHHHH--------------HHTCH---------------HHHTSHHHHHSCHH
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHHHHHH--------------HHHHH---------------HHHhcccHhhCCHH
Confidence 4689999999999988 77777665531 11231 11225899999999
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHhhhhhcCCCcchHHHhHHHHHHH
Q 042020 204 FVDKVSKMMITQNFEHDLICKFLLHYRKSRFCSASQVEKCKMTEVVI 250 (538)
Q Consensus 204 ~~~rvI~am~~~g~~~e~I~~aL~~Yak~~l~~~~~~~~r~LLE~Vv 250 (538)
.+..+|+.. ..+|+.|+++++.|++++... +...-..|+++|+
T Consensus 56 ~L~~lL~sd---v~~E~~vf~av~~Wv~~d~~~-R~~~~~~Ll~~VR 98 (105)
T 2eqx_A 56 LLTDIISDG---VPCSQNPTEAIEAWINFNKEE-REAFAESLRTSLK 98 (105)
T ss_dssp HHHHHHHTC---EETTSCHHHHHHHHHHTTHHH-HHHHHHHHHHHCC
T ss_pred HHHHHHcCC---CCCHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHH
Confidence 988888763 447779999999999977541 1233347777774
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.37 E-value=0.027 Score=54.13 Aligned_cols=93 Identities=17% Similarity=0.231 Sum_probs=70.3
Q ss_pred EEEEecCceeEEchHHHHhhcc-HHHHHhhcCCCC----CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHH
Q 042020 7 LEVDVNGEETFMVDKKILASFS-GRFNKLFSGLNG----STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIV 80 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S-~yfr~lf~~~~~----e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~ 80 (538)
|+|.| ||..|..-+..|.... .+|.+||..... ......+-| |-+ |..|+.|++|.-+ |++.+.. -.+.
T Consensus 14 V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRt-G~L~lP~~~~~~ 88 (202)
T 3drx_A 14 VRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRH-GKLVINKDLAEE 88 (202)
T ss_dssp EEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHH-SCCCCCTTSCHH
T ss_pred EEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcC-CccCCCCCCCHH
Confidence 67899 8999999999998775 488999875321 011233433 444 5699999999999 8988743 2346
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHHHHHHH
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIEKSLEE 111 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~ 111 (538)
.++.-|+|+++.+ |++.|++-+.+
T Consensus 89 ~l~eEA~FygL~~-------Lv~~l~~~i~e 112 (202)
T 3drx_A 89 GVLEEAEFYNITS-------LIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHHTTCHH-------HHHHHHHHHHH
T ss_pred HHHHHHHHCCcHH-------HHHHHHHHHHH
Confidence 7999999999997 99999988865
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.79 E-value=0.016 Score=50.86 Aligned_cols=85 Identities=20% Similarity=0.248 Sum_probs=61.7
Q ss_pred eeEEEEecCceeEEchHHHHhhccH-HHHHhhcCCCC-CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHHh
Q 042020 5 CDLEVDVNGEETFMVDKKILASFSG-RFNKLFSGLNG-STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIVL 81 (538)
Q Consensus 5 ~Dv~i~V~g~~~F~lHK~vLas~S~-yfr~lf~~~~~-e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~~ 81 (538)
-=|+|.| ||..|...+..|....+ +|.+||+.... ......+-+ |=+ |..|..|++|.-+ |++.+.+ -.+..
T Consensus 5 ~~V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRd--p~~F~~ILnylR~-G~l~~p~~~~~~~ 79 (115)
T 3kvt_A 5 NRVIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRH--PGVFAQIINYYRS-GKLHYPTDVCGPL 79 (115)
T ss_dssp CEEEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSC--TTTHHHHHHHHHH-SCBCCCSSSCHHH
T ss_pred CEEEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecC--hHHHHHHHHHhcC-CCCCCCCcccHHH
Confidence 3478899 89999999999987744 45667653210 112334444 333 5699999999999 8987754 35678
Q ss_pred HHHHHhhhcccCC
Q 042020 82 LSCAARFMEMGGD 94 (538)
Q Consensus 82 L~cAA~~LqM~e~ 94 (538)
++.-|+|.++++.
T Consensus 80 ~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 80 FEEELEFWGLDSN 92 (115)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHhCCChH
Confidence 9999999999985
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.10 E-value=0.079 Score=46.99 Aligned_cols=87 Identities=14% Similarity=0.222 Sum_probs=59.6
Q ss_pred eEEEEecCceeEEchHHHHhhccHHHHHhhcCCCC----CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHH
Q 042020 6 DLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNG----STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIV 80 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~----e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~ 80 (538)
=|+|.| ||..|..-+..|...-+- |+....+ ......+-+ +-.|+.|+.|++|.-+ |++.+.+ ..+.
T Consensus 14 ~V~LNV-GG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~-G~l~~p~~~~~~ 85 (124)
T 1s1g_A 14 LIVLNV-SGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRT-GKLHYPRYECIS 85 (124)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHH-SCBCCCTTSCHH
T ss_pred EEEEEe-CCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhc-CCCCCCCCcCHH
Confidence 367899 899999999998765432 2322110 012233433 2347899999999999 8987644 2468
Q ss_pred hHHHHHhhhcccCCCCCcchHHHHHH
Q 042020 81 LLSCAARFMEMGGDGHGNLNLIDQIE 106 (538)
Q Consensus 81 ~L~cAA~~LqM~e~~~~~~NL~~~ce 106 (538)
.++.-|+|+++.+. +++.||
T Consensus 86 ~l~~Ea~fy~i~~l------~l~~cC 105 (124)
T 1s1g_A 86 AYDDELAFYGILPE------IIGDCC 105 (124)
T ss_dssp HHHHHHHHTTCCGG------GBCHHH
T ss_pred HHHHHHHHcCCChH------HHHHHH
Confidence 89999999999983 455654
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.15 E-value=0.065 Score=46.07 Aligned_cols=86 Identities=15% Similarity=0.245 Sum_probs=59.7
Q ss_pred EEEEecCceeEEchHHHHhhccHHHHHhhcCCCCC----CCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHHh
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRFNKLFSGLNGS----TSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIVL 81 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~e----~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~~ 81 (538)
|+|.| ||..|...+..|....+- |+....+. .....+-+ |=+ |+.|+.|++|.-+ |++.+.+ ..+..
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~Fi-DRd--p~~F~~ILnflR~-g~l~~p~~~~~~~ 73 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFF-DRD--PDIFRHILNFYRT-GKLHYPRHECISA 73 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEE-CSC--TTTHHHHHHHHHH-SCBCCCTTSCHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEE-eCC--cHHHHHHHHHHhc-CCCCCCCCcCHHH
Confidence 78999 899999999999765432 23321110 11223443 333 5799999999999 8887644 34788
Q ss_pred HHHHHhhhcccCCCCCcchHHHHHH
Q 042020 82 LSCAARFMEMGGDGHGNLNLIDQIE 106 (538)
Q Consensus 82 L~cAA~~LqM~e~~~~~~NL~~~ce 106 (538)
++.-|+|.++++. +++.||
T Consensus 74 l~~Ea~fy~i~~l------~~~~cc 92 (105)
T 1nn7_A 74 YDEELAFFGLIPE------IIGDCC 92 (105)
T ss_dssp HHHHHHHHTCCSC------CBCHHH
T ss_pred HHHHHHHcCCCHH------HHHHHH
Confidence 9999999999984 556655
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.15 E-value=0.1 Score=47.24 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=56.8
Q ss_pred eEEEEecCceeEEchHHHHhhccHHHHHhhcCCCC----CCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHH
Q 042020 6 DLEVDVNGEETFMVDKKILASFSGRFNKLFSGLNG----STSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIV 80 (538)
Q Consensus 6 Dv~i~V~g~~~F~lHK~vLas~S~yfr~lf~~~~~----e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~ 80 (538)
=|+|.| ||..|...+..|...-+- |+....+ ......+-+ +-.++.|+.|++|.-+ |++.+.+ ..+.
T Consensus 36 ~V~LNV-GG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~-G~l~~p~~~~~~ 107 (140)
T 2nz0_B 36 LIVLNV-SGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRT-GKLHYPRYECIS 107 (140)
T ss_dssp EEEEEE-TTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHH-SSBCCCTTSCHH
T ss_pred EEEEEE-CCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhc-CCcCCCCCcCHH
Confidence 377899 899999999999765432 3332110 012234443 2347899999999999 8987643 3478
Q ss_pred hHHHHHhhhcccCC
Q 042020 81 LLSCAARFMEMGGD 94 (538)
Q Consensus 81 ~L~cAA~~LqM~e~ 94 (538)
.++.-|+|+++++.
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 89999999999984
No 36
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=89.39 E-value=0.29 Score=41.71 Aligned_cols=84 Identities=18% Similarity=0.248 Sum_probs=56.1
Q ss_pred EEEEecCceeEEchHHHHhhccH-HHHHhhcCCC-CCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHHhHH
Q 042020 7 LEVDVNGEETFMVDKKILASFSG-RFNKLFSGLN-GSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIVLLS 83 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~-yfr~lf~~~~-~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~~L~ 83 (538)
|+|.| ||..|...+..|...-+ .+.+|+.... -.....++-+ |=+ |+.|+.|++|.-++|++.+.+ -.+..++
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRd--p~~F~~ILnflR~~G~l~~p~~~~~~~~~ 78 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRN--RPSFDAILYFYQSGGRLRRPVNVPLDVFS 78 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSC--STTHHHHHHHHHTTSCCCCCTTSCHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCC--hHHHHHHHHHHhcCCcccCCCCCCHHHHH
Confidence 68899 89999999999965532 2344443110 0012334444 333 569999999999636876533 3467799
Q ss_pred HHHhhhcccCC
Q 042020 84 CAARFMEMGGD 94 (538)
Q Consensus 84 cAA~~LqM~e~ 94 (538)
.-|+|.++.+.
T Consensus 79 ~Ea~fy~i~~~ 89 (100)
T 1t1d_A 79 EEIKFYELGEN 89 (100)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHHcCCCHH
Confidence 99999999983
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=81.98 E-value=1.6 Score=32.26 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 042020 488 TEKFEAQFRGMQRKVMELEKICSIMQTEMGNMSQ 521 (538)
Q Consensus 488 ~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~k~~~ 521 (538)
...||.--+..=+||.+||..|..+.+||+++.+
T Consensus 6 l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 6 ILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 4567777778889999999999999999998864
No 38
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=79.47 E-value=2.7 Score=31.69 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=29.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 042020 485 TTTTEKFEAQFRGMQRKVMELEKICSIMQTEMGN 518 (538)
Q Consensus 485 ~~e~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~k 518 (538)
..|.+.||.|++.+|.|+.+|.+++...+.++.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3478889999999999999999999999988764
No 39
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=71.33 E-value=1.4 Score=28.42 Aligned_cols=17 Identities=35% Similarity=0.376 Sum_probs=14.4
Q ss_pred hhHHhHHHHHhhhcccC
Q 042020 77 SNIVLLSCAARFMEMGG 93 (538)
Q Consensus 77 ~NV~~L~cAA~~LqM~e 93 (538)
.||+.|+.||+||+=.|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 49999999999998543
No 40
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=69.11 E-value=6.1 Score=29.97 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 042020 488 TEKFEAQFRGMQRKVMELEKICSIMQTEMGNMSQ 521 (538)
Q Consensus 488 ~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~k~~~ 521 (538)
...||.-=...-.+|.+||..|+.|.+||+++.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445544456678999999999999999999865
No 41
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=66.85 E-value=7.9 Score=28.84 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=32.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042020 484 ITTTTEKFEAQFRGMQRKVMELEKICSIMQTEMGNM 519 (538)
Q Consensus 484 ~~~e~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~k~ 519 (538)
+..||-.||.|++.=...++.||.|-+.||.-+..+
T Consensus 15 Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 15 LKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 467999999999999999999999999999887654
No 42
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=64.18 E-value=5.7 Score=32.57 Aligned_cols=44 Identities=18% Similarity=0.285 Sum_probs=36.2
Q ss_pred CCccchhHHHHHHHHHHHhccccccchhHHHHHHhhhhhhhhhc
Q 042020 310 KDYIYDVSLVLRLVKVFLFENRSWLSMSRLNKVAGLVDSYLAEV 353 (538)
Q Consensus 310 ~~~~ydvd~v~ri~~~Fl~~~~~~~~~~~~~~VakLvD~yLaEi 353 (538)
++..++.+++.||+..+........+..++..+|+++|-|..|.
T Consensus 5 ~~~~~~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 5 REGGFRKETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp --CCCCHHHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHH
Confidence 35578999999999998876655667889999999999999884
No 43
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=57.50 E-value=9.6 Score=31.99 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 042020 493 AQFRGMQRKVMELEKICSIMQTEMG 517 (538)
Q Consensus 493 ~~~~~m~~rv~eLe~~~~~m~~~~~ 517 (538)
.||+.||..|.+||..+.+||+..+
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999988554
No 44
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=57.18 E-value=6.1 Score=32.65 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=36.5
Q ss_pred CCCccchhHHHHHHHHHHHhccccccchhHHHHHHhhhhhhhhhc
Q 042020 309 GKDYIYDVSLVLRLVKVFLFENRSWLSMSRLNKVAGLVDSYLAEV 353 (538)
Q Consensus 309 ~~~~~ydvd~v~ri~~~Fl~~~~~~~~~~~~~~VakLvD~yLaEi 353 (538)
+++..+..+++.||+..+........+..++..+++++|-|..|.
T Consensus 8 ~~~~~i~~~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 8 GAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp ---CCCCHHHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHH
Confidence 345678999999999988876656667889999999999999884
No 45
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=51.15 E-value=11 Score=32.65 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=25.8
Q ss_pred hccCCCCCChhHHHHHHHhcCCccccccchhhHHHHHHHHhcCC
Q 042020 352 EVSPDSHLKPSKFVALLKVLPDFTRQSHDGLYHTMDMYLQVHAG 395 (538)
Q Consensus 352 EiA~D~~L~~~kF~~Lae~lP~~aR~~~DgLYrAIDiyLk~Hp~ 395 (538)
|...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 55677888888887654 7889999999999984
No 46
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.60 E-value=14 Score=30.81 Aligned_cols=37 Identities=11% Similarity=0.009 Sum_probs=32.3
Q ss_pred CeeeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhh
Q 042020 70 GKIKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEIS 113 (538)
Q Consensus 70 ~~i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v 113 (538)
+.=.|+++|...++..|+.++.++ |.++|..|+.+..
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~-------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPE-------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHH-------HHHHHHHHHHHTC
T ss_pred hhccCCHHHHHHHHHHHHHcCCHH-------HHHHHHHHHHHHH
Confidence 345689999999999999988886 9999999998765
No 47
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=35.68 E-value=42 Score=26.96 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=29.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 042020 483 NITTTTEKFEAQFRGMQRKVMELEKICSIMQTEM 516 (538)
Q Consensus 483 ~~~~e~~~lr~~~~~m~~rv~eLe~~~~~m~~~~ 516 (538)
.++.|-+.||..+...-.|+..||.|+.-+|+-.
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3467789999999999999999999999998754
No 48
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=32.84 E-value=34 Score=36.79 Aligned_cols=84 Identities=19% Similarity=0.287 Sum_probs=53.9
Q ss_pred EEEEecCceeEEchHHHHhhccHHH-HHhhcCC-CCCCCCceEEecCCCCCHHHHHHHHHHHhhcCeeeech-hhHHhHH
Q 042020 7 LEVDVNGEETFMVDKKILASFSGRF-NKLFSGL-NGSTSNLKVIFHDFPGGAEGFELIARYCYSLGKIKITA-SNIVLLS 83 (538)
Q Consensus 7 v~i~V~g~~~F~lHK~vLas~S~yf-r~lf~~~-~~e~~~~~v~L~~~pgG~e~felv~~FcY~~~~i~it~-~NV~~L~ 83 (538)
|+|.| ||..|...+.-|...-+-+ -+++... .-.....+.-+ +-.|+.|+.+++|..++|++.+.. -.+..+.
T Consensus 54 v~lNV-gG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 54 VVINI-SGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEE-TTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEe-CCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 67789 8999999998886442211 1122100 00012234443 334789999999999856876533 2456688
Q ss_pred HHHhhhcccCC
Q 042020 84 CAARFMEMGGD 94 (538)
Q Consensus 84 cAA~~LqM~e~ 94 (538)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 99999999984
No 49
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=32.65 E-value=17 Score=30.21 Aligned_cols=38 Identities=8% Similarity=0.098 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhccccccchhHHHHHHhhhhhhhhhc
Q 042020 316 VSLVLRLVKVFLFENRSWLSMSRLNKVAGLVDSYLAEV 353 (538)
Q Consensus 316 vd~v~ri~~~Fl~~~~~~~~~~~~~~VakLvD~yLaEi 353 (538)
.+++.||+..|..+.....+...+..|+|.||-|..|.
T Consensus 4 ~~llaRIL~~~F~~~kTrIt~da~~lv~kY~diFVrEA 41 (88)
T 3v9r_B 4 KEALIKILSQNEGGNDMKIADEVVPMIQKYLDIFIDEA 41 (88)
T ss_dssp SHHHHHHHTTTSCSSCCEECTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceecHHHHHHHHHHHHHHHHHH
Confidence 46788999988776655667788999999999999884
No 50
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=30.35 E-value=51 Score=28.92 Aligned_cols=45 Identities=11% Similarity=-0.036 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhcCeeeechhhHHhHHHHHhhhcccCCCCCcchHHHHHHHHHHHhh
Q 042020 58 GFELIARYCYSLGKIKITASNIVLLSCAARFMEMGGDGHGNLNLIDQIEKSLEEIS 113 (538)
Q Consensus 58 ~felv~~FcY~~~~i~it~~NV~~L~cAA~~LqM~e~~~~~~NL~~~ce~FL~~~v 113 (538)
..+.+.+|.-. .++++|+..++..|+..+..+ |.+.|..|+.++.
T Consensus 120 l~~~c~~~l~~----~l~~~n~~~~~~~A~~~~~~~-------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 120 LKVMCEDALCS----NLSVENAAEILILADLHSADQ-------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHH----TCCTTTHHHHHHHHHHTTCHH-------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH----hCCHHHHHHHHHHHHHhCcHH-------HHHHHHHHHHHHH
Confidence 44455555553 478999999999999988886 9999999998855
No 51
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=27.62 E-value=69 Score=23.32 Aligned_cols=11 Identities=0% Similarity=0.296 Sum_probs=4.5
Q ss_pred HHHHHHHHHHH
Q 042020 490 KFEAQFRGMQR 500 (538)
Q Consensus 490 ~lr~~~~~m~~ 500 (538)
++|.|+++|+.
T Consensus 19 E~RkElqK~K~ 29 (45)
T 1use_A 19 EVKKELQKVKE 29 (45)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444443
No 52
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=23.01 E-value=92 Score=24.85 Aligned_cols=12 Identities=8% Similarity=0.210 Sum_probs=5.6
Q ss_pred hHHHHHHHHHHH
Q 042020 487 TTEKFEAQFRGM 498 (538)
Q Consensus 487 e~~~lr~~~~~m 498 (538)
+...+|.+|++.
T Consensus 20 eL~~~r~e~~~q 31 (74)
T 2xv5_A 20 EMAEMRARMQQQ 31 (74)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344455554443
No 53
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=22.22 E-value=1.1e+02 Score=23.50 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=22.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042020 485 TTTTEKFEAQFRGMQRKVMELEKICSIMQTEMG 517 (538)
Q Consensus 485 ~~e~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~ 517 (538)
..+.++|+.+-+.++.++..|++|...+++-|.
T Consensus 29 e~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 29 TGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445666666667777777777777777776553
No 54
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=21.16 E-value=76 Score=23.69 Aligned_cols=27 Identities=4% Similarity=0.123 Sum_probs=22.9
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHH
Q 042020 483 NITTTTEKFEAQFRGMQRKVMELEKIC 509 (538)
Q Consensus 483 ~~~~e~~~lr~~~~~m~~rv~eLe~~~ 509 (538)
.+.+||++||..++.++.++.||.+..
T Consensus 23 aLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 23 LLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457799999999999999999988754
No 55
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=20.92 E-value=36 Score=28.22 Aligned_cols=24 Identities=33% Similarity=0.382 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 042020 495 FRGMQRKVMELEKICSIMQTEMGN 518 (538)
Q Consensus 495 ~~~m~~rv~eLe~~~~~m~~~~~k 518 (538)
+-|.|.||+|||..+..++.++..
T Consensus 60 ViRLQKKImdLE~~~~~l~~el~~ 83 (88)
T 1uuj_A 60 VIRLQKKVMELESKLNEAKEEFTS 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445899999999999999999864
No 56
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=20.73 E-value=1.1e+02 Score=25.43 Aligned_cols=36 Identities=8% Similarity=0.194 Sum_probs=27.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 042020 484 ITTTTEKFEAQFRGMQRKVMELEKICSIMQTEMGNM 519 (538)
Q Consensus 484 ~~~e~~~lr~~~~~m~~rv~eLe~~~~~m~~~~~k~ 519 (538)
+..++..|..+++.++....++.+|-..||+.++.+
T Consensus 53 LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 53 LENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455677777888888888888888888888877765
Done!