Query 042025
Match_columns 844
No_of_seqs 302 out of 1783
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 22:56:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ohm_A Guanine nucleotide-bind 100.0 5.5E-73 1.9E-77 613.4 28.7 323 425-822 4-326 (327)
2 1cip_A Protein (guanine nucleo 100.0 6.7E-71 2.3E-75 602.0 28.6 341 408-822 7-352 (353)
3 1azs_C GS-alpha; complex (lyas 100.0 8.7E-70 3E-74 602.7 28.6 364 393-823 1-394 (402)
4 4fid_A G protein alpha subunit 100.0 3.2E-70 1.1E-74 594.6 24.4 318 426-823 3-336 (340)
5 1zcb_A G alpha I/13; GTP-bindi 100.0 7.3E-69 2.5E-73 587.8 27.0 342 408-822 8-360 (362)
6 2xtz_A Guanine nucleotide-bind 100.0 1.6E-67 5.5E-72 575.8 28.5 342 426-822 7-353 (354)
7 3l82_B F-box only protein 4; T 99.5 3.3E-15 1.1E-19 153.7 6.4 113 652-816 108-225 (227)
8 3l2o_B F-box only protein 4; s 99.5 2.4E-14 8.3E-19 153.2 5.0 113 652-816 193-310 (312)
9 1c1y_A RAS-related protein RAP 99.3 1.9E-11 6.6E-16 113.9 15.0 116 646-813 51-166 (167)
10 2a9k_A RAS-related protein RAL 99.3 2.6E-11 8.8E-16 115.1 15.0 118 646-816 66-183 (187)
11 3oes_A GTPase rhebl1; small GT 99.3 6.7E-11 2.3E-15 115.7 18.1 120 646-818 72-191 (201)
12 1ky3_A GTP-binding protein YPT 99.3 5.4E-11 1.8E-15 112.4 16.7 124 646-817 58-181 (182)
13 1u8z_A RAS-related protein RAL 99.3 3.2E-11 1.1E-15 111.9 14.3 116 646-814 52-167 (168)
14 2bov_A RAla, RAS-related prote 99.3 4.2E-11 1.4E-15 116.1 15.7 119 646-817 62-180 (206)
15 1z2a_A RAS-related protein RAB 99.2 9.3E-11 3.2E-15 109.3 14.8 114 646-814 54-167 (168)
16 2bme_A RAB4A, RAS-related prot 99.2 1.7E-10 5.8E-15 110.1 15.7 118 646-817 59-176 (186)
17 3t5g_A GTP-binding protein RHE 99.2 1.9E-10 6.4E-15 109.6 15.8 119 646-817 54-172 (181)
18 1kao_A RAP2A; GTP-binding prot 99.2 1.2E-10 4.2E-15 107.9 14.0 115 646-813 51-165 (167)
19 2o52_A RAS-related protein RAB 99.2 2E-10 6.8E-15 112.8 14.8 118 646-817 74-191 (200)
20 1upt_A ARL1, ADP-ribosylation 99.2 3.3E-10 1.1E-14 106.1 14.6 119 646-814 51-169 (171)
21 4bas_A ADP-ribosylation factor 99.1 5.3E-10 1.8E-14 107.8 14.3 125 646-819 63-194 (199)
22 2x77_A ADP-ribosylation factor 99.1 6.6E-10 2.3E-14 107.0 14.8 120 646-815 66-185 (189)
23 1moz_A ARL1, ADP-ribosylation 99.1 7.1E-10 2.4E-14 105.5 14.5 120 646-815 62-181 (183)
24 2h57_A ADP-ribosylation factor 99.1 1.2E-09 4E-14 105.6 15.5 118 646-813 67-186 (190)
25 2gf0_A GTP-binding protein DI- 99.1 2.5E-10 8.7E-15 110.0 10.6 118 646-816 56-173 (199)
26 1fzq_A ADP-ribosylation factor 99.1 5.1E-10 1.7E-14 108.2 12.3 119 646-814 60-178 (181)
27 1r8s_A ADP-ribosylation factor 99.1 3.8E-10 1.3E-14 105.3 10.9 119 646-814 44-162 (164)
28 1ksh_A ARF-like protein 2; sma 99.1 9.3E-10 3.2E-14 105.5 13.3 120 646-815 62-181 (186)
29 2h17_A ADP-ribosylation factor 99.1 6.7E-10 2.3E-14 106.7 11.6 116 646-811 65-180 (181)
30 1zj6_A ADP-ribosylation factor 99.0 1.1E-09 3.9E-14 105.4 12.2 120 646-815 60-179 (187)
31 2b6h_A ADP-ribosylation factor 99.0 1.2E-09 4.2E-14 106.6 11.8 119 646-814 73-191 (192)
32 1f6b_A SAR1; gtpases, N-termin 99.0 1.7E-09 5.9E-14 106.3 12.7 122 646-812 69-197 (198)
33 3lvq_E ARF-GAP with SH3 domain 99.0 1.2E-09 4E-14 122.7 12.9 124 646-819 366-489 (497)
34 3t1o_A Gliding protein MGLA; G 99.0 7.1E-10 2.4E-14 106.1 9.6 122 645-817 73-195 (198)
35 1zd9_A ADP-ribosylation factor 99.0 1.5E-09 5E-14 105.2 10.9 120 646-815 67-186 (188)
36 1m2o_B GTP-binding protein SAR 99.0 3.8E-09 1.3E-13 103.0 13.8 117 646-811 67-189 (190)
37 2g6b_A RAS-related protein RAB 98.9 9E-09 3.1E-13 97.4 12.6 117 646-816 60-176 (180)
38 1x3s_A RAS-related protein RAB 98.9 1E-08 3.6E-13 98.2 12.7 116 646-815 64-179 (195)
39 3bc1_A RAS-related protein RAB 98.9 6.4E-09 2.2E-13 98.9 10.8 121 646-819 70-190 (195)
40 2a5j_A RAS-related protein RAB 98.9 1.9E-08 6.4E-13 97.4 13.7 119 646-818 70-188 (191)
41 2hup_A RAS-related protein RAB 98.9 1E-08 3.5E-13 100.8 11.6 117 646-816 78-195 (201)
42 3tw8_B RAS-related protein RAB 98.9 2.8E-08 9.7E-13 93.6 14.0 119 646-819 58-176 (181)
43 2hxs_A RAB-26, RAS-related pro 98.9 1.6E-08 5.6E-13 95.4 12.4 120 646-817 56-176 (178)
44 2fn4_A P23, RAS-related protei 98.9 1E-08 3.5E-13 96.6 10.9 119 646-817 57-175 (181)
45 2oil_A CATX-8, RAS-related pro 98.8 2.8E-08 9.5E-13 95.9 13.6 118 646-817 74-191 (193)
46 2fu5_C RAS-related protein RAB 98.8 1.4E-08 4.8E-13 96.8 11.3 120 646-819 57-176 (183)
47 2q3h_A RAS homolog gene family 98.8 3.2E-08 1.1E-12 96.1 14.1 130 646-817 68-198 (201)
48 2efe_B Small GTP-binding prote 98.8 2.2E-08 7.6E-13 94.7 12.5 116 646-815 61-176 (181)
49 2atv_A RERG, RAS-like estrogen 98.8 1.4E-08 5E-13 98.6 11.3 116 646-815 76-192 (196)
50 1z0f_A RAB14, member RAS oncog 98.8 2.4E-08 8.2E-13 93.9 11.9 115 646-814 64-178 (179)
51 3o47_A ADP-ribosylation factor 98.8 1.7E-08 5.8E-13 108.5 12.2 119 646-814 209-327 (329)
52 3reg_A RHO-like small GTPase; 98.8 2.2E-08 7.4E-13 97.0 11.7 120 646-816 71-190 (194)
53 2gf9_A RAS-related protein RAB 98.8 7.1E-08 2.4E-12 92.9 15.2 116 646-815 71-186 (189)
54 3q72_A GTP-binding protein RAD 98.8 3.1E-08 1.1E-12 92.4 12.1 116 646-814 49-164 (166)
55 4dsu_A GTPase KRAS, isoform 2B 98.8 2.3E-08 8E-13 95.0 11.1 119 646-818 52-170 (189)
56 3cpj_B GTP-binding protein YPT 98.8 5.1E-08 1.8E-12 97.1 14.0 120 646-819 62-181 (223)
57 1z08_A RAS-related protein RAB 98.8 5.2E-08 1.8E-12 91.1 13.2 115 645-813 54-168 (170)
58 1r2q_A RAS-related protein RAB 98.8 3.8E-08 1.3E-12 91.5 12.2 113 646-812 55-167 (170)
59 2bcg_Y Protein YP2, GTP-bindin 98.8 5.4E-08 1.8E-12 95.1 13.8 117 646-816 57-173 (206)
60 1wms_A RAB-9, RAB9, RAS-relate 98.8 2.6E-08 8.8E-13 94.0 11.0 120 646-815 56-175 (177)
61 1ek0_A Protein (GTP-binding pr 98.8 3.1E-08 1.1E-12 92.1 11.3 117 646-813 52-168 (170)
62 1vg8_A RAS-related protein RAB 98.8 4.2E-08 1.4E-12 95.3 12.4 122 646-817 57-178 (207)
63 2j0v_A RAC-like GTP-binding pr 98.8 5.3E-08 1.8E-12 95.5 12.9 127 646-818 57-184 (212)
64 4dkx_A RAS-related protein RAB 98.8 2.9E-08 9.8E-13 100.9 11.3 117 645-815 61-177 (216)
65 2y8e_A RAB-protein 6, GH09086P 98.8 4E-08 1.4E-12 92.4 11.5 114 646-813 63-176 (179)
66 2atx_A Small GTP binding prote 98.8 8.5E-08 2.9E-12 92.6 14.1 126 646-813 66-192 (194)
67 3tkl_A RAS-related protein RAB 98.8 5.6E-08 1.9E-12 93.3 12.8 119 646-818 65-183 (196)
68 2f7s_A C25KG, RAS-related prot 98.8 1.4E-08 4.6E-13 100.1 8.3 118 646-816 84-201 (217)
69 2yc2_C IFT27, small RAB-relate 98.7 2E-08 6.7E-13 97.2 8.7 120 646-818 73-196 (208)
70 1g16_A RAS-related protein SEC 98.7 5.4E-08 1.9E-12 90.7 11.4 115 646-815 52-166 (170)
71 3kkq_A RAS-related protein M-R 98.7 3.1E-08 1E-12 94.4 9.7 116 646-814 66-182 (183)
72 3q3j_B RHO-related GTP-binding 98.7 8.1E-08 2.8E-12 95.6 13.1 130 646-817 75-206 (214)
73 2fg5_A RAB-22B, RAS-related pr 98.7 1.2E-07 4.1E-12 92.0 13.2 116 645-814 71-186 (192)
74 1mh1_A RAC1; GTP-binding, GTPa 98.7 7.1E-08 2.4E-12 91.4 11.1 128 646-815 53-181 (186)
75 2j1l_A RHO-related GTP-binding 98.7 6.6E-08 2.2E-12 95.9 11.3 130 646-817 82-212 (214)
76 2nzj_A GTP-binding protein REM 98.7 7.5E-08 2.6E-12 90.4 11.1 119 646-817 52-172 (175)
77 3llu_A RAS-related GTP-binding 98.7 5.4E-08 1.8E-12 94.9 10.3 124 646-812 69-195 (196)
78 3con_A GTPase NRAS; structural 98.7 5.9E-08 2E-12 93.2 10.4 119 646-818 69-187 (190)
79 3clv_A RAB5 protein, putative; 98.7 1.1E-07 3.6E-12 90.7 11.7 113 646-815 93-205 (208)
80 3q85_A GTP-binding protein REM 98.7 7.3E-08 2.5E-12 90.2 10.4 116 646-814 51-167 (169)
81 1z06_A RAS-related protein RAB 98.7 6.9E-08 2.4E-12 93.0 10.4 115 646-813 69-187 (189)
82 2il1_A RAB12; G-protein, GDP, 98.7 6.7E-08 2.3E-12 93.9 10.3 116 646-814 75-190 (192)
83 3dz8_A RAS-related protein RAB 98.7 5.1E-08 1.7E-12 94.3 9.3 117 645-815 71-187 (191)
84 3c5c_A RAS-like protein 12; GD 98.7 9.5E-08 3.2E-12 92.7 11.2 115 646-814 69-186 (187)
85 3cph_A RAS-related protein SEC 98.7 1.1E-07 3.7E-12 92.8 11.6 117 646-817 69-185 (213)
86 1zbd_A Rabphilin-3A; G protein 98.7 7.6E-08 2.6E-12 93.6 10.4 118 646-817 57-174 (203)
87 2p5s_A RAS and EF-hand domain 98.7 9.1E-08 3.1E-12 93.3 10.9 121 646-814 77-197 (199)
88 4gzl_A RAS-related C3 botulinu 98.7 1.2E-07 4E-12 93.5 11.6 126 646-812 78-203 (204)
89 3ihw_A Centg3; RAS, centaurin, 98.7 9.4E-08 3.2E-12 92.8 10.6 117 646-817 67-183 (184)
90 2ew1_A RAS-related protein RAB 98.6 1.8E-07 6.1E-12 92.8 12.8 119 646-818 75-193 (201)
91 1m7b_A RND3/RHOE small GTP-bin 98.6 2.1E-07 7.2E-12 89.4 12.5 128 645-814 54-183 (184)
92 3gj0_A GTP-binding nuclear pro 98.6 9.2E-08 3.1E-12 94.8 10.2 115 646-817 64-178 (221)
93 2iwr_A Centaurin gamma 1; ANK 98.6 3.2E-07 1.1E-11 86.9 13.3 117 646-818 54-173 (178)
94 2gco_A H9, RHO-related GTP-bin 98.6 1.3E-07 4.4E-12 92.6 10.7 127 646-813 73-199 (201)
95 2ce2_X GTPase HRAS; signaling 98.6 8.9E-08 3E-12 88.2 8.8 114 646-813 51-164 (166)
96 2fv8_A H6, RHO-related GTP-bin 98.6 2.2E-07 7.6E-12 91.3 11.8 129 646-815 73-201 (207)
97 2erx_A GTP-binding protein DI- 98.6 7.7E-08 2.6E-12 89.6 7.9 116 646-814 51-167 (172)
98 1z0j_A RAB-22, RAS-related pro 98.6 3.6E-07 1.2E-11 85.1 12.4 114 646-813 55-168 (170)
99 3bwd_D RAC-like GTP-binding pr 98.6 1.4E-07 5E-12 89.2 9.9 125 646-813 56-180 (182)
100 2fh5_B SR-beta, signal recogni 98.6 2E-07 6.7E-12 91.6 10.9 74 646-736 54-130 (214)
101 1gwn_A RHO-related GTP-binding 98.6 3.2E-07 1.1E-11 91.0 12.5 128 645-814 75-204 (205)
102 3cbq_A GTP-binding protein REM 98.6 2.4E-07 8.2E-12 90.9 11.1 119 646-817 72-191 (195)
103 2lkc_A Translation initiation 98.6 2E-07 7E-12 87.9 10.2 121 646-818 55-175 (178)
104 3l0i_B RAS-related protein RAB 98.6 4.7E-08 1.6E-12 95.4 5.6 115 646-814 82-196 (199)
105 4djt_A GTP-binding nuclear pro 98.5 5.5E-07 1.9E-11 88.6 10.9 119 646-818 61-179 (218)
106 2wkq_A NPH1-1, RAS-related C3 98.4 8.9E-07 3.1E-11 92.3 12.1 127 646-814 203-330 (332)
107 2g3y_A GTP-binding protein GEM 98.3 2.1E-06 7.1E-11 86.7 10.8 116 646-814 87-203 (211)
108 3r7w_B Gtpase2, GTP-binding pr 98.3 3.8E-07 1.3E-11 99.3 5.4 124 646-815 46-175 (331)
109 2qu8_A Putative nucleolar GTP- 98.3 4E-06 1.4E-10 83.9 12.4 123 646-816 76-207 (228)
110 3th5_A RAS-related C3 botulinu 97.6 1.1E-07 3.9E-12 92.8 0.0 126 646-812 78-203 (204)
111 4dhe_A Probable GTP-binding pr 98.2 2.7E-06 9.1E-11 83.8 8.3 123 646-816 79-213 (223)
112 3r7w_A Gtpase1, GTP-binding pr 98.2 9.6E-06 3.3E-10 86.1 13.0 121 646-812 52-179 (307)
113 1u0l_A Probable GTPase ENGC; p 98.2 1.1E-05 3.7E-10 85.7 13.4 106 647-810 64-169 (301)
114 2f9l_A RAB11B, member RAS onco 98.2 2E-05 6.7E-10 76.9 13.7 117 646-816 54-170 (199)
115 2cjw_A GTP-binding protein GEM 98.2 1E-05 3.5E-10 79.1 11.4 117 646-815 56-173 (192)
116 3c5h_A Glucocorticoid receptor 98.1 2.9E-06 9.8E-11 87.5 7.6 109 653-813 125-254 (255)
117 3pqc_A Probable GTP-binding pr 98.1 2.4E-06 8.4E-11 81.4 6.1 114 647-814 69-194 (195)
118 1svi_A GTP-binding protein YSX 98.1 6.2E-06 2.1E-10 79.2 8.2 112 647-813 70-194 (195)
119 2dyk_A GTP-binding protein; GT 98.1 3.6E-06 1.2E-10 77.8 5.7 105 646-812 49-160 (161)
120 1oix_A RAS-related protein RAB 98.0 7.2E-05 2.5E-09 72.9 13.7 113 646-812 78-190 (191)
121 2zej_A Dardarin, leucine-rich 98.0 1.4E-05 4.7E-10 77.1 8.3 122 646-814 56-178 (184)
122 2gj8_A MNME, tRNA modification 97.9 2.3E-05 7.8E-10 75.2 8.8 108 646-816 52-168 (172)
123 2wji_A Ferrous iron transport 97.9 3E-05 1E-09 73.4 8.8 106 646-812 50-163 (165)
124 2wjg_A FEOB, ferrous iron tran 97.9 6.5E-05 2.2E-09 71.6 10.9 110 646-816 54-171 (188)
125 2ged_A SR-beta, signal recogni 97.8 5.2E-06 1.8E-10 79.8 2.3 72 647-736 92-171 (193)
126 2cxx_A Probable GTP-binding pr 97.8 3.6E-06 1.2E-10 80.1 1.2 129 647-818 45-188 (190)
127 1nrj_B SR-beta, signal recogni 97.7 7E-06 2.4E-10 80.7 1.4 73 646-736 55-135 (218)
128 3a1s_A Iron(II) transport prot 97.7 0.00011 3.8E-09 76.3 10.4 107 646-813 52-166 (258)
129 3sjy_A Translation initiation 97.7 7.9E-05 2.7E-09 82.0 9.6 118 646-814 75-192 (403)
130 3iev_A GTP-binding protein ERA 97.7 7.2E-05 2.5E-09 79.5 8.9 113 646-813 59-181 (308)
131 3dpu_A RAB family protein; roc 97.7 3.2E-05 1.1E-09 88.0 6.1 114 645-816 97-210 (535)
132 3iby_A Ferrous iron transport 97.6 0.00013 4.4E-09 75.8 8.6 105 646-811 48-164 (256)
133 3tr5_A RF-3, peptide chain rel 97.6 0.00026 8.9E-09 81.3 11.8 67 646-735 82-148 (528)
134 3k53_A Ferrous iron transport 97.6 0.00042 1.4E-08 71.7 12.0 109 646-814 50-166 (271)
135 4dcu_A GTP-binding protein ENG 97.5 5.2E-05 1.8E-09 84.8 4.9 119 646-816 243-371 (456)
136 3gee_A MNME, tRNA modification 97.5 0.00028 9.7E-09 80.0 10.6 109 646-813 281-397 (476)
137 3i8s_A Ferrous iron transport 97.5 0.00022 7.6E-09 74.4 8.5 108 646-814 50-169 (274)
138 1zun_B Sulfate adenylate trans 97.5 0.00015 5.1E-09 80.7 7.6 111 646-804 104-214 (434)
139 1xzp_A Probable tRNA modificat 97.4 0.00033 1.1E-08 79.6 10.0 106 646-814 291-405 (482)
140 1lnz_A SPO0B-associated GTP-bi 97.4 9.1E-05 3.1E-09 80.6 5.2 119 646-815 206-331 (342)
141 3j2k_7 ERF3, eukaryotic polype 97.4 0.00039 1.3E-08 77.7 10.2 122 646-806 95-217 (439)
142 2elf_A Protein translation elo 97.4 0.00071 2.4E-08 74.2 11.9 114 646-814 60-180 (370)
143 3b1v_A Ferrous iron uptake tra 97.4 0.00024 8.1E-09 74.7 7.8 107 646-813 49-163 (272)
144 1g7s_A Translation initiation 97.4 0.00041 1.4E-08 80.8 10.5 135 647-813 71-217 (594)
145 2hjg_A GTP-binding protein ENG 97.4 8.4E-05 2.9E-09 82.6 4.5 107 646-814 51-165 (436)
146 3p26_A Elongation factor 1 alp 97.4 0.00051 1.7E-08 77.5 10.7 117 646-803 111-227 (483)
147 1wf3_A GTP-binding protein; GT 97.4 0.00016 5.3E-09 77.0 5.9 109 646-812 55-171 (301)
148 1mky_A Probable GTP-binding pr 97.4 0.00022 7.6E-09 79.3 7.4 109 646-814 49-166 (439)
149 1d2e_A Elongation factor TU (E 97.3 0.00035 1.2E-08 76.8 7.8 67 646-735 66-133 (397)
150 1wb1_A Translation elongation 97.3 0.00018 6.1E-09 81.5 5.6 116 646-813 73-188 (482)
151 1s0u_A EIF-2-gamma, translatio 97.3 0.00021 7.1E-09 78.8 5.7 117 646-813 81-197 (408)
152 2e87_A Hypothetical protein PH 97.2 0.0012 4.2E-08 71.2 11.4 115 646-816 214-338 (357)
153 3izy_P Translation initiation 97.2 0.00031 1.1E-08 81.0 7.0 117 646-814 52-168 (537)
154 2c78_A Elongation factor TU-A; 97.2 0.00046 1.6E-08 75.8 7.8 67 646-735 75-142 (405)
155 3cb4_D GTP-binding protein LEP 97.2 0.00085 2.9E-08 78.3 9.8 113 645-814 70-182 (599)
156 2hjg_A GTP-binding protein ENG 97.1 0.00037 1.3E-08 77.4 5.6 116 646-815 223-350 (436)
157 1kk1_A EIF2gamma; initiation o 97.1 0.00081 2.8E-08 74.0 8.2 117 646-813 83-199 (410)
158 2ywe_A GTP-binding protein LEP 97.0 0.001 3.5E-08 77.6 8.3 112 646-814 73-184 (600)
159 3ec1_A YQEH GTPase; atnos1, at 97.0 0.00095 3.2E-08 73.0 7.4 102 658-812 59-160 (369)
160 1jny_A EF-1-alpha, elongation 97.0 0.0006 2.1E-08 75.9 5.8 122 646-806 84-205 (435)
161 1r5b_A Eukaryotic peptide chai 96.9 0.00096 3.3E-08 75.2 7.0 36 646-682 121-156 (467)
162 4dcu_A GTP-binding protein ENG 96.9 0.00042 1.4E-08 77.5 3.9 67 646-735 71-145 (456)
163 1f60_A Elongation factor EEF1A 96.8 0.0025 8.5E-08 71.6 9.2 36 646-682 85-120 (458)
164 3h2y_A GTPase family protein; 96.8 0.0019 6.6E-08 70.7 7.9 102 658-812 57-158 (368)
165 3geh_A MNME, tRNA modification 96.8 0.0034 1.2E-07 71.0 9.9 107 646-816 272-386 (462)
166 3izq_1 HBS1P, elongation facto 96.8 0.0018 6E-08 75.7 7.7 116 646-804 245-362 (611)
167 1zo1_I IF2, translation initia 96.8 0.00094 3.2E-08 76.4 5.2 112 647-810 52-163 (501)
168 3lxx_A GTPase IMAP family memb 96.8 0.0017 5.8E-08 65.5 6.5 73 646-736 78-160 (239)
169 2xtp_A GTPase IMAP family memb 96.7 0.0019 6.3E-08 65.9 6.8 124 646-814 71-208 (260)
170 3qq5_A Small GTP-binding prote 96.7 0.0015 5.2E-08 73.1 6.6 107 647-815 84-197 (423)
171 2qtf_A Protein HFLX, GTP-bindi 96.6 0.0096 3.3E-07 65.2 11.8 124 646-816 226-356 (364)
172 3t5d_A Septin-7; GTP-binding p 96.6 0.0025 8.4E-08 66.1 6.7 26 423-448 3-28 (274)
173 1ega_A Protein (GTP-binding pr 96.6 0.0047 1.6E-07 65.4 9.0 109 646-812 56-173 (301)
174 3mca_A HBS1, elongation factor 96.6 0.00085 2.9E-08 78.0 3.4 115 646-802 255-371 (592)
175 1mky_A Probable GTP-binding pr 96.5 0.0057 1.9E-07 68.0 9.2 117 646-815 228-356 (439)
176 2aka_B Dynamin-1; fusion prote 96.5 0.00041 1.4E-08 71.6 -0.1 112 646-811 125-250 (299)
177 3avx_A Elongation factor TS, e 96.5 0.0038 1.3E-07 77.8 8.2 117 646-812 359-484 (1289)
178 1dar_A EF-G, elongation factor 96.5 0.0087 3E-07 70.8 11.0 68 646-736 77-144 (691)
179 3lxw_A GTPase IMAP family memb 96.5 0.0035 1.2E-07 64.3 6.7 72 646-735 70-153 (247)
180 2dy1_A Elongation factor G; tr 96.4 0.0048 1.6E-07 72.6 8.3 66 646-734 74-139 (665)
181 3p32_A Probable GTPase RV1496/ 96.4 0.016 5.6E-07 62.6 11.5 111 646-814 172-284 (355)
182 1yrb_A ATP(GTP)binding protein 96.3 0.0048 1.7E-07 62.4 6.3 27 789-815 232-258 (262)
183 2rdo_7 EF-G, elongation factor 96.1 0.016 5.4E-07 68.7 10.5 69 645-736 81-149 (704)
184 2j69_A Bacterial dynamin-like 96.1 0.0068 2.3E-07 71.7 7.3 130 647-815 175-326 (695)
185 2yv5_A YJEQ protein; hydrolase 95.9 0.023 8E-07 60.2 9.5 92 664-809 73-164 (302)
186 2h5e_A Peptide chain release f 95.7 0.0098 3.3E-07 68.3 6.1 67 646-735 82-148 (529)
187 2xex_A Elongation factor G; GT 95.4 0.011 3.7E-07 70.0 5.4 68 646-736 75-142 (693)
188 2wsm_A Hydrogenase expression/ 95.3 0.1 3.4E-06 51.2 11.1 106 646-814 109-214 (221)
189 1pui_A ENGB, probable GTP-bind 95.0 0.13 4.5E-06 49.7 10.7 28 786-813 171-198 (210)
190 1n0u_A EF-2, elongation factor 94.8 0.022 7.5E-07 68.9 5.4 68 645-735 97-164 (842)
191 1jwy_B Dynamin A GTPase domain 94.6 0.02 6.8E-07 59.7 4.1 69 646-735 131-212 (315)
192 1udx_A The GTP-binding protein 94.5 0.08 2.7E-06 59.1 8.6 116 647-816 206-327 (416)
193 2www_A Methylmalonic aciduria 94.1 0.15 5.2E-06 55.2 9.8 112 646-813 167-278 (349)
194 2p67_A LAO/AO transport system 94.1 0.1 3.5E-06 56.1 8.2 110 646-813 149-260 (341)
195 3def_A T7I23.11 protein; chlor 94.0 0.031 1E-06 57.5 3.8 72 646-734 84-164 (262)
196 1puj_A YLQF, conserved hypothe 93.9 0.069 2.3E-06 56.3 6.2 97 658-815 11-107 (282)
197 2qag_A Septin-2, protein NEDD5 93.8 0.028 9.6E-07 61.2 3.3 23 426-448 35-57 (361)
198 1oix_A RAS-related protein RAB 93.3 0.039 1.3E-06 53.5 3.0 23 426-448 27-49 (191)
199 2ce2_X GTPase HRAS; signaling 93.3 0.046 1.6E-06 49.7 3.3 21 428-448 3-23 (166)
200 1wxq_A GTP-binding protein; st 93.3 0.04 1.4E-06 61.0 3.4 38 646-683 71-114 (397)
201 3t34_A Dynamin-related protein 93.2 0.058 2E-06 58.1 4.4 70 646-736 136-218 (360)
202 4gzl_A RAS-related C3 botulinu 93.2 0.044 1.5E-06 53.5 3.1 26 423-448 25-50 (204)
203 3c5c_A RAS-like protein 12; GD 93.0 0.049 1.7E-06 52.3 3.1 29 420-448 13-41 (187)
204 1z08_A RAS-related protein RAB 93.0 0.048 1.7E-06 50.3 2.9 23 426-448 4-26 (170)
205 1z0j_A RAB-22, RAS-related pro 93.0 0.047 1.6E-06 50.3 2.8 23 426-448 4-26 (170)
206 3clv_A RAB5 protein, putative; 92.9 0.045 1.5E-06 51.6 2.7 25 424-448 3-27 (208)
207 1z0f_A RAB14, member RAS oncog 92.9 0.048 1.6E-06 50.6 2.8 24 426-449 13-36 (179)
208 2hxs_A RAB-26, RAS-related pro 92.9 0.053 1.8E-06 50.6 3.1 24 426-449 4-27 (178)
209 3q72_A GTP-binding protein RAD 92.8 0.053 1.8E-06 49.9 3.0 21 428-448 2-22 (166)
210 2f9l_A RAB11B, member RAS onco 92.8 0.052 1.8E-06 52.6 3.0 23 427-449 4-26 (199)
211 1upt_A ARL1, ADP-ribosylation 92.8 0.057 1.9E-06 49.9 3.1 23 426-448 5-27 (171)
212 1svi_A GTP-binding protein YSX 92.8 0.057 1.9E-06 51.4 3.2 25 424-448 19-43 (195)
213 1ek0_A Protein (GTP-binding pr 92.7 0.054 1.9E-06 49.7 2.9 21 428-448 3-23 (170)
214 2nzj_A GTP-binding protein REM 92.7 0.06 2.1E-06 49.9 3.2 23 427-449 3-25 (175)
215 2erx_A GTP-binding protein DI- 92.7 0.06 2.1E-06 49.5 3.1 23 427-449 2-24 (172)
216 2wjg_A FEOB, ferrous iron tran 92.7 0.059 2E-06 51.0 3.1 22 427-448 6-27 (188)
217 1r2q_A RAS-related protein RAB 92.7 0.056 1.9E-06 49.6 2.9 23 426-448 4-26 (170)
218 2efe_B Small GTP-binding prote 92.6 0.058 2E-06 50.4 2.9 23 426-448 10-32 (181)
219 1g16_A RAS-related protein SEC 92.6 0.067 2.3E-06 49.2 3.3 23 427-449 2-24 (170)
220 3q85_A GTP-binding protein REM 92.5 0.064 2.2E-06 49.6 3.1 21 428-448 2-22 (169)
221 3bwd_D RAC-like GTP-binding pr 92.5 0.059 2E-06 50.4 2.8 25 424-448 4-28 (182)
222 1m7b_A RND3/RHOE small GTP-bin 92.5 0.068 2.3E-06 50.8 3.3 24 425-448 4-27 (184)
223 1zp6_A Hypothetical protein AT 92.4 0.056 1.9E-06 51.8 2.7 23 430-452 11-33 (191)
224 1wms_A RAB-9, RAB9, RAS-relate 92.4 0.06 2E-06 50.2 2.8 23 426-448 5-27 (177)
225 2zej_A Dardarin, leucine-rich 92.4 0.057 1.9E-06 51.6 2.6 22 428-449 2-23 (184)
226 4dsu_A GTPase KRAS, isoform 2B 92.3 0.066 2.2E-06 50.3 3.0 23 426-448 2-24 (189)
227 2qpt_A EH domain-containing pr 92.3 0.042 1.4E-06 63.4 1.9 67 647-735 155-232 (550)
228 2fn4_A P23, RAS-related protei 92.3 0.075 2.6E-06 49.4 3.3 23 426-448 7-29 (181)
229 1moz_A ARL1, ADP-ribosylation 92.3 0.061 2.1E-06 50.5 2.7 23 426-448 16-38 (183)
230 4gp7_A Metallophosphoesterase; 92.3 0.055 1.9E-06 52.1 2.4 18 430-447 11-28 (171)
231 2b6h_A ADP-ribosylation factor 92.3 0.081 2.8E-06 51.1 3.6 26 423-448 24-49 (192)
232 1zd9_A ADP-ribosylation factor 92.2 0.067 2.3E-06 51.2 2.9 26 423-448 17-42 (188)
233 2wji_A Ferrous iron transport 92.2 0.074 2.5E-06 49.9 3.1 22 428-449 3-24 (165)
234 2atv_A RERG, RAS-like estrogen 92.2 0.071 2.4E-06 51.2 3.0 25 425-449 25-49 (196)
235 3tw8_B RAS-related protein RAB 92.2 0.07 2.4E-06 49.6 2.9 23 426-448 7-29 (181)
236 3bc1_A RAS-related protein RAB 92.1 0.072 2.5E-06 50.0 3.0 23 426-448 9-31 (195)
237 3con_A GTPase NRAS; structural 92.1 0.072 2.5E-06 50.6 2.9 22 427-448 20-41 (190)
238 3ihw_A Centg3; RAS, centaurin, 92.0 0.079 2.7E-06 50.9 3.1 23 426-448 18-40 (184)
239 1zj6_A ADP-ribosylation factor 92.0 0.091 3.1E-06 50.0 3.5 26 424-449 12-37 (187)
240 1vg8_A RAS-related protein RAB 92.0 0.081 2.8E-06 50.8 3.1 23 426-448 6-28 (207)
241 2iwr_A Centaurin gamma 1; ANK 91.9 0.071 2.4E-06 49.9 2.7 23 426-448 5-27 (178)
242 2lkc_A Translation initiation 91.9 0.074 2.5E-06 49.6 2.7 23 426-448 6-28 (178)
243 3kkq_A RAS-related protein M-R 91.9 0.081 2.8E-06 49.8 3.1 24 426-449 16-39 (183)
244 2y8e_A RAB-protein 6, GH09086P 91.9 0.083 2.8E-06 49.0 3.1 22 427-448 13-34 (179)
245 2g6b_A RAS-related protein RAB 91.9 0.08 2.7E-06 49.4 3.0 23 426-448 8-30 (180)
246 1z06_A RAS-related protein RAB 91.9 0.084 2.9E-06 50.3 3.1 23 426-448 18-40 (189)
247 1fzq_A ADP-ribosylation factor 91.9 0.087 3E-06 50.3 3.3 23 426-448 14-36 (181)
248 1ye8_A Protein THEP1, hypothet 91.8 0.074 2.5E-06 52.2 2.7 22 430-451 2-23 (178)
249 3vqt_A RF-3, peptide chain rel 91.7 0.61 2.1E-05 53.7 10.6 67 646-735 100-166 (548)
250 2ehv_A Hypothetical protein PH 91.7 0.072 2.5E-06 52.9 2.5 32 418-449 18-51 (251)
251 2dyk_A GTP-binding protein; GT 91.7 0.086 2.9E-06 48.1 2.9 21 429-449 2-22 (161)
252 3t1o_A Gliding protein MGLA; G 91.7 0.093 3.2E-06 49.5 3.2 23 424-446 10-32 (198)
253 3dz8_A RAS-related protein RAB 91.7 0.086 2.9E-06 50.4 3.0 24 426-449 21-44 (191)
254 2fh5_B SR-beta, signal recogni 91.6 0.078 2.7E-06 51.5 2.7 25 425-449 4-28 (214)
255 2p5s_A RAS and EF-hand domain 91.6 0.084 2.9E-06 50.9 2.9 25 424-448 24-48 (199)
256 3reg_A RHO-like small GTPase; 91.6 0.089 3E-06 50.3 3.0 24 425-448 20-43 (194)
257 1ksh_A ARF-like protein 2; sma 91.5 0.093 3.2E-06 49.6 3.0 23 426-448 16-38 (186)
258 2oil_A CATX-8, RAS-related pro 91.5 0.086 2.9E-06 50.3 2.8 23 426-448 23-45 (193)
259 2fg5_A RAB-22B, RAS-related pr 91.5 0.096 3.3E-06 50.2 3.1 23 426-448 21-43 (192)
260 1mh1_A RAC1; GTP-binding, GTPa 91.5 0.093 3.2E-06 49.1 2.9 22 427-448 4-25 (186)
261 2ged_A SR-beta, signal recogni 91.4 0.091 3.1E-06 50.0 2.9 24 426-449 46-69 (193)
262 2hf9_A Probable hydrogenase ni 91.4 0.11 3.9E-06 51.0 3.6 26 788-813 198-223 (226)
263 2h17_A ADP-ribosylation factor 91.4 0.098 3.4E-06 49.6 3.0 25 425-449 18-42 (181)
264 3tkl_A RAS-related protein RAB 91.4 0.096 3.3E-06 49.7 3.0 23 426-448 14-36 (196)
265 3llu_A RAS-related GTP-binding 91.4 0.093 3.2E-06 50.6 2.9 25 423-447 15-39 (196)
266 2gf9_A RAS-related protein RAB 91.3 0.098 3.4E-06 49.8 3.0 23 426-448 20-42 (189)
267 2cxx_A Probable GTP-binding pr 91.3 0.098 3.3E-06 49.3 2.9 21 429-449 2-22 (190)
268 1gwn_A RHO-related GTP-binding 91.3 0.11 3.6E-06 51.2 3.3 23 426-448 26-48 (205)
269 2bcg_Y Protein YP2, GTP-bindin 91.3 0.099 3.4E-06 50.5 3.0 23 426-448 6-28 (206)
270 2h57_A ADP-ribosylation factor 91.3 0.088 3E-06 50.2 2.6 24 425-448 18-41 (190)
271 3cbq_A GTP-binding protein REM 91.3 0.088 3E-06 51.2 2.6 23 426-448 21-43 (195)
272 1m2o_B GTP-binding protein SAR 91.3 0.095 3.3E-06 50.5 2.8 24 426-449 21-44 (190)
273 1h65_A Chloroplast outer envel 91.3 0.085 2.9E-06 54.3 2.6 73 646-735 87-168 (270)
274 3tr0_A Guanylate kinase, GMP k 91.3 0.086 3E-06 51.0 2.5 22 430-451 9-30 (205)
275 3pqc_A Probable GTP-binding pr 91.2 0.082 2.8E-06 49.9 2.3 23 426-448 21-43 (195)
276 1r8s_A ADP-ribosylation factor 91.1 0.099 3.4E-06 48.0 2.7 20 429-448 1-20 (164)
277 2a5j_A RAS-related protein RAB 91.1 0.11 3.7E-06 49.7 3.0 23 426-448 19-41 (191)
278 2gj8_A MNME, tRNA modification 91.0 0.11 3.9E-06 49.3 3.1 22 427-448 3-24 (172)
279 1f6b_A SAR1; gtpases, N-termin 91.0 0.12 4E-06 50.3 3.2 23 426-448 23-45 (198)
280 1x3s_A RAS-related protein RAB 90.9 0.11 3.8E-06 49.1 2.9 23 426-448 13-35 (195)
281 2il1_A RAB12; G-protein, GDP, 90.8 0.12 4E-06 49.8 3.0 23 426-448 24-46 (192)
282 1nrj_B SR-beta, signal recogni 90.8 0.11 3.8E-06 50.6 2.9 24 425-448 9-32 (218)
283 2j1l_A RHO-related GTP-binding 90.8 0.13 4.4E-06 50.5 3.3 24 426-449 32-55 (214)
284 2f7s_A C25KG, RAS-related prot 90.8 0.11 3.9E-06 50.5 2.9 23 426-448 23-45 (217)
285 2q3h_A RAS homolog gene family 90.8 0.12 4E-06 49.7 2.9 23 426-448 18-40 (201)
286 2bdt_A BH3686; alpha-beta prot 90.8 0.1 3.5E-06 50.2 2.5 20 430-449 4-23 (189)
287 1kgd_A CASK, peripheral plasma 90.8 0.1 3.5E-06 50.4 2.5 23 430-452 7-29 (180)
288 4a74_A DNA repair and recombin 90.8 0.11 3.7E-06 50.9 2.7 33 418-450 13-47 (231)
289 2x77_A ADP-ribosylation factor 90.7 0.11 3.8E-06 49.3 2.7 23 426-448 20-42 (189)
290 1kag_A SKI, shikimate kinase I 90.6 0.13 4.3E-06 48.6 2.9 26 430-455 6-31 (173)
291 1lvg_A Guanylate kinase, GMP k 90.4 0.13 4.6E-06 50.6 3.1 24 429-452 5-28 (198)
292 3a00_A Guanylate kinase, GMP k 90.4 0.11 3.9E-06 50.3 2.5 22 431-452 4-25 (186)
293 2ew1_A RAS-related protein RAB 90.4 0.14 4.7E-06 50.3 3.1 23 426-448 24-46 (201)
294 2j0v_A RAC-like GTP-binding pr 90.4 0.14 4.6E-06 49.8 3.0 23 426-448 7-29 (212)
295 1pui_A ENGB, probable GTP-bind 90.4 0.094 3.2E-06 50.7 1.9 26 423-448 21-46 (210)
296 3c8u_A Fructokinase; YP_612366 90.4 0.17 5.6E-06 50.0 3.7 28 426-453 20-47 (208)
297 2fu5_C RAS-related protein RAB 90.3 0.088 3E-06 49.5 1.6 23 426-448 6-28 (183)
298 1zbd_A Rabphilin-3A; G protein 90.3 0.14 4.8E-06 49.2 3.0 22 427-448 7-28 (203)
299 3th5_A RAS-related C3 botulinu 89.7 0.053 1.8E-06 52.4 0.0 30 419-448 21-50 (204)
300 4bas_A ADP-ribosylation factor 90.2 0.15 5.2E-06 48.4 3.1 24 425-448 14-37 (199)
301 2atx_A Small GTP binding prote 90.1 0.15 5.2E-06 48.6 3.1 24 426-449 16-39 (194)
302 2cjw_A GTP-binding protein GEM 90.1 0.16 5.3E-06 49.3 3.2 22 427-448 5-26 (192)
303 3asz_A Uridine kinase; cytidin 90.1 0.19 6.4E-06 49.2 3.8 26 428-453 6-31 (211)
304 3lw7_A Adenylate kinase relate 90.1 0.13 4.5E-06 47.5 2.5 19 430-448 3-21 (179)
305 2hup_A RAS-related protein RAB 90.0 0.16 5.4E-06 49.4 3.1 23 426-448 27-49 (201)
306 1ly1_A Polynucleotide kinase; 90.0 0.14 4.9E-06 48.1 2.7 21 430-450 4-24 (181)
307 3fb4_A Adenylate kinase; psych 90.0 0.16 5.6E-06 49.8 3.3 31 430-460 2-33 (216)
308 2j41_A Guanylate kinase; GMP, 89.9 0.13 4.6E-06 49.6 2.5 24 429-452 7-30 (207)
309 2fv8_A H6, RHO-related GTP-bin 89.8 0.17 6E-06 49.1 3.3 23 426-448 23-45 (207)
310 1znw_A Guanylate kinase, GMP k 89.8 0.14 4.7E-06 50.6 2.5 22 430-451 22-43 (207)
311 2gco_A H9, RHO-related GTP-bin 89.6 0.17 6E-06 48.9 3.1 22 427-448 24-45 (201)
312 4eun_A Thermoresistant glucoki 89.6 0.16 5.5E-06 49.7 2.8 27 426-452 27-53 (200)
313 3lxx_A GTPase IMAP family memb 89.5 0.18 6.1E-06 50.6 3.1 25 424-448 25-49 (239)
314 4dkx_A RAS-related protein RAB 89.4 0.17 5.9E-06 51.0 2.9 22 427-448 12-33 (216)
315 2bbw_A Adenylate kinase 4, AK4 89.3 0.16 5.5E-06 51.3 2.7 26 428-453 27-52 (246)
316 3dl0_A Adenylate kinase; phosp 89.3 0.18 6.1E-06 49.6 2.9 31 430-460 2-33 (216)
317 3t5d_A Septin-7; GTP-binding p 89.3 0.19 6.6E-06 51.8 3.3 112 646-812 65-202 (274)
318 3cph_A RAS-related protein SEC 89.3 0.18 6.3E-06 48.5 2.9 23 426-448 18-40 (213)
319 3q3j_B RHO-related GTP-binding 89.2 0.18 6.3E-06 49.6 2.9 23 426-448 25-47 (214)
320 2yc2_C IFT27, small RAB-relate 89.1 0.1 3.5E-06 49.8 1.1 26 424-449 16-41 (208)
321 1qhx_A CPT, protein (chloramph 89.1 0.21 7.1E-06 47.3 3.1 26 430-455 5-30 (178)
322 3kb2_A SPBC2 prophage-derived 89.1 0.22 7.6E-06 46.4 3.3 24 430-453 3-26 (173)
323 1cke_A CK, MSSA, protein (cyti 89.0 0.22 7.5E-06 49.0 3.3 25 429-453 6-30 (227)
324 1z6g_A Guanylate kinase; struc 88.9 0.17 5.9E-06 50.7 2.5 26 427-452 22-47 (218)
325 1htw_A HI0065; nucleotide-bind 88.9 0.18 6.1E-06 48.8 2.5 24 426-449 31-54 (158)
326 1knq_A Gluconate kinase; ALFA/ 88.9 0.22 7.5E-06 47.2 3.1 24 429-452 9-32 (175)
327 3cm0_A Adenylate kinase; ATP-b 88.9 0.22 7.4E-06 47.5 3.1 25 428-452 4-28 (186)
328 3sop_A Neuronal-specific septi 88.8 0.21 7.3E-06 52.2 3.2 25 428-452 2-26 (270)
329 2g3y_A GTP-binding protein GEM 88.6 0.23 7.8E-06 49.8 3.2 23 426-448 35-57 (211)
330 3cnl_A YLQF, putative uncharac 88.6 0.34 1.1E-05 50.5 4.6 51 659-735 10-60 (262)
331 2qnr_A Septin-2, protein NEDD5 88.6 0.21 7E-06 53.0 3.0 23 426-448 16-38 (301)
332 3gj0_A GTP-binding nuclear pro 88.6 0.16 5.5E-06 49.8 2.0 22 426-447 13-34 (221)
333 2yvu_A Probable adenylyl-sulfa 88.6 0.21 7E-06 48.1 2.8 29 421-449 6-34 (186)
334 2if2_A Dephospho-COA kinase; a 88.5 0.23 7.9E-06 48.2 3.1 21 430-450 3-23 (204)
335 3tif_A Uncharacterized ABC tra 88.4 0.19 6.5E-06 51.4 2.5 24 429-452 32-55 (235)
336 4dhe_A Probable GTP-binding pr 88.4 0.13 4.5E-06 50.2 1.3 24 425-448 26-49 (223)
337 2qu8_A Putative nucleolar GTP- 88.4 0.22 7.7E-06 49.3 3.0 23 426-448 27-49 (228)
338 1nks_A Adenylate kinase; therm 88.4 0.24 8.1E-06 47.0 3.0 23 430-452 3-25 (194)
339 3uie_A Adenylyl-sulfate kinase 88.4 0.27 9.1E-06 48.1 3.5 24 426-449 23-46 (200)
340 3k53_A Ferrous iron transport 88.4 0.24 8.1E-06 51.0 3.2 21 428-448 3-23 (271)
341 3ec2_A DNA replication protein 88.4 0.19 6.6E-06 48.0 2.4 22 428-449 38-59 (180)
342 2wsm_A Hydrogenase expression/ 88.4 0.26 8.8E-06 48.2 3.4 29 420-448 22-50 (221)
343 2pcj_A ABC transporter, lipopr 88.3 0.21 7.1E-06 50.7 2.7 22 430-451 32-53 (224)
344 4djt_A GTP-binding nuclear pro 88.3 0.11 3.9E-06 50.5 0.8 23 426-448 9-31 (218)
345 2qor_A Guanylate kinase; phosp 88.2 0.22 7.5E-06 48.9 2.7 24 429-452 13-36 (204)
346 1s96_A Guanylate kinase, GMP k 88.2 0.2 7E-06 50.8 2.5 22 429-450 17-38 (219)
347 3tau_A Guanylate kinase, GMP k 88.1 0.25 8.6E-06 48.9 3.1 23 430-452 10-32 (208)
348 2w0m_A SSO2452; RECA, SSPF, un 88.1 0.22 7.4E-06 48.6 2.5 20 430-449 25-44 (235)
349 1via_A Shikimate kinase; struc 88.1 0.22 7.5E-06 47.4 2.5 24 430-453 6-29 (175)
350 3cpj_B GTP-binding protein YPT 88.0 0.24 8.3E-06 48.8 2.9 23 426-448 11-33 (223)
351 3t61_A Gluconokinase; PSI-biol 88.0 0.27 9.2E-06 47.9 3.1 24 429-452 19-42 (202)
352 3vaa_A Shikimate kinase, SK; s 87.9 0.3 1E-05 47.7 3.5 27 427-453 24-50 (199)
353 2jaq_A Deoxyguanosine kinase; 87.8 0.26 8.8E-06 47.3 2.9 24 430-453 2-25 (205)
354 3kta_A Chromosome segregation 87.7 0.31 1.1E-05 46.4 3.4 24 430-453 28-51 (182)
355 1y63_A LMAJ004144AAA protein; 87.6 0.27 9.3E-06 47.5 2.9 25 427-451 9-33 (184)
356 3b85_A Phosphate starvation-in 87.5 0.23 8E-06 50.0 2.5 20 430-449 24-43 (208)
357 2ff7_A Alpha-hemolysin translo 87.5 0.25 8.5E-06 51.0 2.7 26 427-452 34-59 (247)
358 2cbz_A Multidrug resistance-as 87.4 0.25 8.7E-06 50.5 2.7 24 428-451 31-54 (237)
359 3a1s_A Iron(II) transport prot 87.4 0.27 9.3E-06 50.7 3.0 23 426-448 3-25 (258)
360 1kht_A Adenylate kinase; phosp 87.4 0.27 9.2E-06 46.7 2.7 24 429-452 4-27 (192)
361 1mv5_A LMRA, multidrug resista 87.3 0.26 8.9E-06 50.5 2.7 25 427-451 27-51 (243)
362 1sgw_A Putative ABC transporte 87.3 0.25 8.5E-06 50.1 2.5 21 429-449 36-56 (214)
363 2rhm_A Putative kinase; P-loop 87.3 0.32 1.1E-05 46.3 3.2 24 429-452 6-29 (193)
364 1aky_A Adenylate kinase; ATP:A 87.3 0.34 1.2E-05 47.9 3.5 27 427-453 3-29 (220)
365 2onk_A Molybdate/tungstate ABC 87.3 0.25 8.4E-06 50.9 2.5 23 429-451 25-47 (240)
366 1ji0_A ABC transporter; ATP bi 87.3 0.25 8.5E-06 50.6 2.5 23 429-451 33-55 (240)
367 3gfo_A Cobalt import ATP-bindi 87.2 0.25 8.4E-06 52.1 2.5 24 429-452 35-58 (275)
368 2pt5_A Shikimate kinase, SK; a 87.2 0.29 9.9E-06 45.8 2.8 24 430-453 2-25 (168)
369 2d2e_A SUFC protein; ABC-ATPas 87.1 0.25 8.7E-06 50.9 2.5 22 429-450 30-51 (250)
370 1g6h_A High-affinity branched- 87.1 0.25 8.7E-06 51.1 2.5 21 429-449 34-54 (257)
371 2eyu_A Twitching motility prot 87.1 0.25 8.6E-06 51.4 2.5 25 427-451 24-48 (261)
372 3trf_A Shikimate kinase, SK; a 87.1 0.29 9.8E-06 46.7 2.7 24 429-452 6-29 (185)
373 1jjv_A Dephospho-COA kinase; P 87.1 0.3 1E-05 47.6 2.9 21 430-450 4-24 (206)
374 1b0u_A Histidine permease; ABC 86.9 0.26 9E-06 51.2 2.5 23 429-451 33-55 (262)
375 2p5t_B PEZT; postsegregational 86.9 0.36 1.2E-05 49.3 3.5 27 427-453 31-57 (253)
376 1lw7_A Transcriptional regulat 86.9 0.35 1.2E-05 52.2 3.6 37 418-454 160-196 (365)
377 2pze_A Cystic fibrosis transme 86.8 0.29 9.9E-06 49.8 2.7 22 428-449 34-55 (229)
378 3lnc_A Guanylate kinase, GMP k 86.8 0.22 7.6E-06 49.7 1.8 21 429-449 28-48 (231)
379 1e4v_A Adenylate kinase; trans 86.8 0.38 1.3E-05 47.4 3.5 24 430-453 2-25 (214)
380 2plr_A DTMP kinase, probable t 86.7 0.36 1.2E-05 46.5 3.2 24 429-452 5-28 (213)
381 2jeo_A Uridine-cytidine kinase 86.7 0.4 1.4E-05 48.5 3.7 27 426-452 23-49 (245)
382 3b1v_A Ferrous iron uptake tra 86.7 0.31 1.1E-05 50.9 2.9 23 427-449 2-24 (272)
383 2qi9_C Vitamin B12 import ATP- 86.6 0.28 9.6E-06 50.8 2.5 21 429-449 27-47 (249)
384 4g1u_C Hemin import ATP-bindin 86.6 0.28 9.6E-06 51.3 2.5 25 428-452 37-61 (266)
385 2iyv_A Shikimate kinase, SK; t 86.5 0.37 1.3E-05 46.0 3.1 30 430-459 4-34 (184)
386 1vpl_A ABC transporter, ATP-bi 86.5 0.29 9.8E-06 51.0 2.5 23 429-451 42-64 (256)
387 2xtp_A GTPase IMAP family memb 86.5 0.35 1.2E-05 48.9 3.2 23 426-448 20-42 (260)
388 2nq2_C Hypothetical ABC transp 86.4 0.3 1E-05 50.6 2.6 23 429-451 32-54 (253)
389 3lxw_A GTPase IMAP family memb 86.4 0.35 1.2E-05 49.4 3.1 23 426-448 19-41 (247)
390 2ghi_A Transport protein; mult 86.4 0.31 1.1E-05 50.6 2.7 23 427-449 45-67 (260)
391 2cvh_A DNA repair and recombin 86.3 0.31 1.1E-05 47.3 2.5 33 418-450 8-42 (220)
392 1tev_A UMP-CMP kinase; ploop, 86.3 0.45 1.5E-05 45.1 3.6 24 429-452 4-27 (196)
393 2ixe_A Antigen peptide transpo 86.2 0.32 1.1E-05 50.9 2.7 25 428-452 45-69 (271)
394 2cdn_A Adenylate kinase; phosp 86.2 0.42 1.4E-05 46.5 3.4 28 426-453 18-45 (201)
395 2olj_A Amino acid ABC transpor 86.2 0.31 1E-05 51.0 2.5 23 429-451 51-73 (263)
396 2yz2_A Putative ABC transporte 86.1 0.31 1.1E-05 50.7 2.5 23 429-451 34-56 (266)
397 2pjz_A Hypothetical protein ST 86.0 0.33 1.1E-05 50.7 2.7 22 428-449 30-51 (263)
398 2zu0_C Probable ATP-dependent 86.0 0.32 1.1E-05 50.8 2.5 22 429-450 47-68 (267)
399 3l0i_B RAS-related protein RAB 86.0 0.13 4.3E-06 49.7 -0.5 23 426-448 31-53 (199)
400 1zd8_A GTP:AMP phosphotransfer 86.0 0.36 1.2E-05 48.0 2.9 25 428-452 7-31 (227)
401 2qt1_A Nicotinamide riboside k 85.9 0.44 1.5E-05 46.5 3.4 25 428-452 21-45 (207)
402 1uf9_A TT1252 protein; P-loop, 85.9 0.45 1.5E-05 45.7 3.4 24 428-451 8-31 (203)
403 2ihy_A ABC transporter, ATP-bi 85.8 0.35 1.2E-05 51.0 2.7 22 428-449 47-68 (279)
404 3tlx_A Adenylate kinase 2; str 85.7 0.48 1.7E-05 48.2 3.7 34 426-459 27-61 (243)
405 2i3b_A HCR-ntpase, human cance 85.6 0.35 1.2E-05 48.0 2.5 19 430-448 3-21 (189)
406 1nn5_A Similar to deoxythymidy 85.4 0.46 1.6E-05 46.1 3.2 24 427-450 8-31 (215)
407 3iij_A Coilin-interacting nucl 85.3 0.43 1.5E-05 45.4 2.9 25 429-453 12-36 (180)
408 2wwf_A Thymidilate kinase, put 85.3 0.47 1.6E-05 46.0 3.2 23 428-450 10-32 (212)
409 2c95_A Adenylate kinase 1; tra 85.2 0.55 1.9E-05 44.9 3.6 26 428-453 9-34 (196)
410 2pbr_A DTMP kinase, thymidylat 85.2 0.41 1.4E-05 45.5 2.7 21 430-450 2-22 (195)
411 1qf9_A UMP/CMP kinase, protein 85.2 0.5 1.7E-05 44.7 3.3 25 429-453 7-31 (194)
412 3def_A T7I23.11 protein; chlor 85.1 0.49 1.7E-05 48.5 3.5 23 427-449 35-57 (262)
413 2vli_A Antibiotic resistance p 85.1 0.38 1.3E-05 45.5 2.4 25 429-453 6-30 (183)
414 1n0w_A DNA repair protein RAD5 85.0 0.39 1.3E-05 47.4 2.5 33 418-450 12-46 (243)
415 2bwj_A Adenylate kinase 5; pho 85.0 0.51 1.8E-05 45.2 3.3 26 428-453 12-37 (199)
416 2obl_A ESCN; ATPase, hydrolase 85.0 0.37 1.3E-05 52.4 2.6 37 417-453 60-96 (347)
417 2hf9_A Probable hydrogenase ni 84.9 1.5 5.1E-05 42.9 6.6 27 423-449 33-59 (226)
418 1cr0_A DNA primase/helicase; R 84.8 0.41 1.4E-05 49.6 2.7 23 430-452 37-59 (296)
419 3o47_A ADP-ribosylation factor 84.8 0.62 2.1E-05 49.8 4.2 25 424-448 161-185 (329)
420 1e6c_A Shikimate kinase; phosp 84.8 0.51 1.7E-05 44.2 3.1 24 430-453 4-27 (173)
421 2bbs_A Cystic fibrosis transme 84.7 0.43 1.5E-05 50.6 2.9 21 429-449 65-85 (290)
422 2qag_A Septin-2, protein NEDD5 84.7 0.47 1.6E-05 51.6 3.2 16 720-735 173-188 (361)
423 2pez_A Bifunctional 3'-phospho 84.7 0.42 1.5E-05 45.6 2.5 23 429-451 6-28 (179)
424 1rz3_A Hypothetical protein rb 84.6 0.52 1.8E-05 46.2 3.2 24 427-450 21-44 (201)
425 3r7w_A Gtpase1, GTP-binding pr 84.5 0.49 1.7E-05 49.9 3.2 22 427-448 2-23 (307)
426 2z0h_A DTMP kinase, thymidylat 84.5 0.46 1.6E-05 45.4 2.7 21 430-450 2-22 (197)
427 1h65_A Chloroplast outer envel 84.5 0.55 1.9E-05 48.2 3.4 22 427-448 38-59 (270)
428 3i8s_A Ferrous iron transport 84.5 0.5 1.7E-05 49.0 3.2 21 428-448 3-23 (274)
429 1jbk_A CLPB protein; beta barr 84.4 0.55 1.9E-05 43.5 3.1 27 422-448 37-63 (195)
430 3sr0_A Adenylate kinase; phosp 84.4 0.55 1.9E-05 47.3 3.3 24 430-453 2-25 (206)
431 1ukz_A Uridylate kinase; trans 84.3 0.61 2.1E-05 45.2 3.6 27 427-453 14-40 (203)
432 1zuh_A Shikimate kinase; alpha 84.2 0.56 1.9E-05 44.1 3.2 26 428-453 7-32 (168)
433 1nlf_A Regulatory protein REPA 84.2 0.45 1.5E-05 49.0 2.7 21 430-450 32-52 (279)
434 4e22_A Cytidylate kinase; P-lo 84.2 0.46 1.6E-05 48.6 2.7 22 428-449 27-48 (252)
435 2v54_A DTMP kinase, thymidylat 84.1 0.54 1.9E-05 45.3 3.1 25 428-452 4-28 (204)
436 3c5h_A Glucocorticoid receptor 83.9 0.56 1.9E-05 47.9 3.2 25 425-449 16-49 (255)
437 1gvn_B Zeta; postsegregational 83.9 0.45 1.5E-05 50.0 2.6 24 427-450 32-55 (287)
438 1gtv_A TMK, thymidylate kinase 83.9 0.34 1.2E-05 47.1 1.5 22 430-451 2-23 (214)
439 2ze6_A Isopentenyl transferase 83.7 0.47 1.6E-05 48.7 2.5 19 431-449 4-22 (253)
440 1zak_A Adenylate kinase; ATP:A 83.7 0.64 2.2E-05 46.0 3.4 31 429-459 6-37 (222)
441 1ex7_A Guanylate kinase; subst 83.6 0.57 1.9E-05 46.7 3.1 19 431-449 4-22 (186)
442 2chg_A Replication factor C sm 83.5 0.42 1.4E-05 45.5 2.0 32 418-449 28-59 (226)
443 3aez_A Pantothenate kinase; tr 83.5 0.55 1.9E-05 50.2 3.1 27 427-453 89-115 (312)
444 3be4_A Adenylate kinase; malar 83.5 0.7 2.4E-05 45.8 3.6 26 428-453 5-30 (217)
445 2xb4_A Adenylate kinase; ATP-b 83.3 0.64 2.2E-05 46.4 3.3 23 430-452 2-24 (223)
446 3iby_A Ferrous iron transport 83.3 0.55 1.9E-05 48.4 2.9 20 429-448 2-21 (256)
447 2qag_C Septin-7; cell cycle, c 83.2 0.53 1.8E-05 52.6 2.9 24 426-449 29-52 (418)
448 2x2e_A Dynamin-1; nitration, h 83.2 0.84 2.9E-05 49.0 4.4 21 428-448 31-51 (353)
449 2v9p_A Replication protein E1; 83.2 0.52 1.8E-05 50.6 2.8 26 427-452 125-150 (305)
450 3ney_A 55 kDa erythrocyte memb 83.0 0.62 2.1E-05 47.0 3.1 23 430-452 21-43 (197)
451 3p26_A Elongation factor 1 alp 83.0 0.81 2.8E-05 51.5 4.3 45 418-464 22-68 (483)
452 1f2t_A RAD50 ABC-ATPase; DNA d 82.9 0.65 2.2E-05 44.1 3.0 21 431-451 26-46 (149)
453 1sq5_A Pantothenate kinase; P- 82.9 0.77 2.6E-05 48.5 3.9 28 426-453 78-105 (308)
454 2p65_A Hypothetical protein PF 82.8 0.59 2E-05 43.5 2.6 28 422-449 37-64 (187)
455 2wkq_A NPH1-1, RAS-related C3 82.7 0.66 2.3E-05 47.9 3.2 23 426-448 153-175 (332)
456 1m7g_A Adenylylsulfate kinase; 82.7 0.81 2.8E-05 45.1 3.7 26 426-451 23-48 (211)
457 2yv5_A YJEQ protein; hydrolase 82.7 0.62 2.1E-05 49.3 3.1 34 419-453 156-189 (302)
458 1vht_A Dephospho-COA kinase; s 82.5 0.72 2.5E-05 45.4 3.2 22 429-450 5-26 (218)
459 3fvq_A Fe(3+) IONS import ATP- 82.4 0.57 1.9E-05 51.5 2.7 22 430-451 32-53 (359)
460 1ixz_A ATP-dependent metallopr 82.4 0.57 2E-05 47.2 2.5 22 431-452 52-73 (254)
461 2dpy_A FLII, flagellum-specifi 82.2 0.59 2E-05 52.4 2.8 36 418-453 147-182 (438)
462 2gza_A Type IV secretion syste 82.1 0.6 2E-05 50.7 2.7 27 427-453 174-200 (361)
463 3jvv_A Twitching mobility prot 82.1 0.56 1.9E-05 51.2 2.5 19 430-448 125-143 (356)
464 1z47_A CYSA, putative ABC-tran 82.0 0.57 2E-05 51.3 2.5 21 429-449 42-62 (355)
465 3lvq_E ARF-GAP with SH3 domain 82.0 0.76 2.6E-05 51.3 3.6 23 426-448 320-342 (497)
466 3a4m_A L-seryl-tRNA(SEC) kinas 82.0 0.63 2.2E-05 47.8 2.7 22 429-450 5-26 (260)
467 2x8a_A Nuclear valosin-contain 81.9 0.58 2E-05 48.7 2.5 19 431-449 47-65 (274)
468 1tf7_A KAIC; homohexamer, hexa 81.8 0.6 2E-05 53.0 2.7 20 429-448 40-59 (525)
469 3bos_A Putative DNA replicatio 81.7 0.79 2.7E-05 44.6 3.2 31 419-449 43-73 (242)
470 3nh6_A ATP-binding cassette SU 81.7 0.46 1.6E-05 50.9 1.6 28 426-453 78-105 (306)
471 2yyz_A Sugar ABC transporter, 81.6 0.6 2.1E-05 51.2 2.5 23 430-452 31-53 (359)
472 1ltq_A Polynucleotide kinase; 81.5 0.63 2.2E-05 48.0 2.5 21 430-450 4-24 (301)
473 1u0l_A Probable GTPase ENGC; p 81.4 0.7 2.4E-05 48.7 2.9 32 419-450 160-191 (301)
474 2pt7_A CAG-ALFA; ATPase, prote 81.3 0.58 2E-05 50.3 2.3 24 429-452 172-195 (330)
475 2qag_B Septin-6, protein NEDD5 81.3 0.65 2.2E-05 52.2 2.7 26 423-448 37-62 (427)
476 1g29_1 MALK, maltose transport 81.2 0.63 2.2E-05 51.2 2.5 22 430-451 31-52 (372)
477 1uj2_A Uridine-cytidine kinase 81.2 0.93 3.2E-05 46.0 3.6 28 426-453 20-47 (252)
478 2it1_A 362AA long hypothetical 81.2 0.64 2.2E-05 51.0 2.5 23 429-451 30-52 (362)
479 2ewv_A Twitching motility prot 81.1 0.65 2.2E-05 50.7 2.6 24 427-450 135-158 (372)
480 1v43_A Sugar-binding transport 81.0 0.65 2.2E-05 51.1 2.5 24 429-452 38-61 (372)
481 1bif_A 6-phosphofructo-2-kinas 81.0 0.74 2.5E-05 51.5 3.0 24 426-449 37-60 (469)
482 2grj_A Dephospho-COA kinase; T 81.0 1.1 3.6E-05 44.7 3.8 36 425-460 9-45 (192)
483 3rlf_A Maltose/maltodextrin im 81.0 0.66 2.2E-05 51.4 2.5 23 430-452 31-53 (381)
484 3dpu_A RAB family protein; roc 80.7 0.51 1.8E-05 53.6 1.7 24 426-449 39-62 (535)
485 3umf_A Adenylate kinase; rossm 80.7 0.86 2.9E-05 46.5 3.1 23 431-453 32-54 (217)
486 2qm8_A GTPase/ATPase; G protei 80.6 8.6 0.00029 41.3 11.1 108 644-814 146-261 (337)
487 1ak2_A Adenylate kinase isoenz 80.5 0.99 3.4E-05 45.2 3.5 26 428-453 16-41 (233)
488 2kjq_A DNAA-related protein; s 80.5 0.69 2.4E-05 43.9 2.2 21 429-449 37-57 (149)
489 1odf_A YGR205W, hypothetical 3 80.5 0.99 3.4E-05 47.7 3.6 28 426-453 29-56 (290)
490 2f1r_A Molybdopterin-guanine d 80.5 0.58 2E-05 45.8 1.7 23 430-452 4-26 (171)
491 1p9r_A General secretion pathw 80.4 0.69 2.4E-05 51.6 2.5 19 430-448 169-187 (418)
492 3tui_C Methionine import ATP-b 80.2 0.72 2.5E-05 50.8 2.5 25 429-453 55-79 (366)
493 2dr3_A UPF0273 protein PH0284; 80.2 0.81 2.8E-05 45.1 2.7 31 418-448 11-43 (247)
494 1iy2_A ATP-dependent metallopr 80.1 0.76 2.6E-05 47.2 2.5 23 431-453 76-98 (278)
495 3b9q_A Chloroplast SRP recepto 79.9 0.76 2.6E-05 48.9 2.5 25 427-451 99-123 (302)
496 3nwj_A ATSK2; P loop, shikimat 79.7 0.79 2.7E-05 47.6 2.5 26 428-453 48-73 (250)
497 3d31_A Sulfate/molybdate ABC t 79.7 0.56 1.9E-05 51.2 1.5 23 430-452 28-50 (348)
498 2f6r_A COA synthase, bifunctio 79.5 1 3.5E-05 47.0 3.4 24 427-450 74-97 (281)
499 1c9k_A COBU, adenosylcobinamid 79.3 0.9 3.1E-05 45.3 2.7 19 431-449 2-20 (180)
500 2npi_A Protein CLP1; CLP1-PCF1 79.3 0.82 2.8E-05 51.6 2.7 25 426-450 136-160 (460)
No 1
>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A*
Probab=100.00 E-value=5.5e-73 Score=613.43 Aligned_cols=323 Identities=27% Similarity=0.482 Sum_probs=287.6
Q ss_pred hcceeeEEEeeccCCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhccCCCCCccc
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYRYLSILLDGRERFEEEATARMNAQGSHDQIS 504 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~eEr~~~r~iIqsNi~~sm~~LLea~e~feee~l~~~~~~~~~~e~s 504 (844)
.++++||||||+||||||||+|||||||++||+++|+..||.+|++|++++|+.||++|+.|++ .++
T Consensus 4 ~~~~~klLlLG~geSGKSTi~KQmkiih~~gfs~~e~~~~~~~i~~N~~~~~~~li~a~~~l~i---------~~~---- 70 (327)
T 3ohm_A 4 ARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKI---------PYK---- 70 (327)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTC---------CCS----
T ss_pred hcccceEEEEcCCCccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC---------CCC----
Confidence 4689999999999999999999999999999999999999999999999999999999998752 222
Q ss_pred ccCCCCCCCCccccccccCchhhhhhHHHHhhhhcCCCCccCcccchhHHHHHHHhcCCHHHHHHHhccccccccccchh
Q 042025 505 EAGGEADPSETTQCIYSINPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVDEVWKDPAIQETYKRKDELHFLPDVAE 584 (844)
Q Consensus 505 ~~~~~~~~~~~~~~Iysi~p~~k~fsd~ll~i~~~g~ld~~~P~~t~E~a~~I~~LW~DpaIQ~ty~Rr~Ef~~L~DsA~ 584 (844)
+|.++.++++++++..... ..++++++++|.+||+||+||+||+||+||+ |+|+|.
T Consensus 71 ------------------~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~i~~lW~d~~iq~~~~r~~e~~-l~d~~~ 126 (327)
T 3ohm_A 71 ------------------YEHNKAHAQLVREVDVEKV-----SAFENPYVDAIKSLWNDPGIQECYDRRREYQ-LSDSTK 126 (327)
T ss_dssp ------------------STHHHHHHHHHHTCCGGGC-----CCCCTTHHHHHHHHHTCHHHHHHHHGGGGSC-CCTTHH
T ss_pred ------------------CchhHHHHHHHhccccccc-----ccccHHHHHHHHHHHcCHHHHHHHHccccce-ecccHH
Confidence 3556778888876533221 1246799999999999999999999999999 999999
Q ss_pred hcccccccccCCCCCCCccceeEeeccccCCceEEEEEEecCCCCCCccccCcccCCCCCCceEEEEEeCCCCCCCcccc
Q 042025 585 YFLSRAVEVSSNEYEPSDRDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTDNLEVQPQPLTKYQLIRVNAKGMNEGCKW 664 (844)
Q Consensus 585 YFLd~l~RI~~~dY~PTd~DILraR~~TtG~GI~e~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~liDVGGQ~rseR~KW 664 (844)
|||++++||+.++|.||++|||++|.+|+| +.+..|.++. +++++||+||| +++|++|
T Consensus 127 yfl~~l~Ri~~~~Y~PT~~Dilr~r~~TiG--i~~~~~~~~~-------------------v~l~iwDtgGQ-e~~R~~w 184 (327)
T 3ohm_A 127 YYLNDLDRVADPSYLPTQQDVLRVRVPTTG--IIEYPFDLQS-------------------VIFRMVDVGGQ-RSERRKW 184 (327)
T ss_dssp HHHTTHHHHHSTTCCCCHHHHTTCCCCCCS--EEEEEEEETT-------------------EEEEEEEECCS-HHHHTTG
T ss_pred HHHHHHHHHhccCCCccccchhcccCceee--EEEEEEEeec-------------------eeeEEEEcCCc-hhHHHHH
Confidence 999999999999999999999999999998 8888888753 68999999999 8999999
Q ss_pred eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhhccccc
Q 042025 665 VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLS 744 (844)
Q Consensus 665 ~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs 744 (844)
.+||+++++||||+|+|+|||++ .|+. ..|||++++.+|++++++++|.++|+|||+||+||+++||+++||+
T Consensus 185 ~~yf~~~~~iIfV~dls~ydq~l--~d~~-----~~nr~~es~~~~~~i~~~~~~~~~~iiL~~NK~DL~~~ki~~~~l~ 257 (327)
T 3ohm_A 185 IHCFENVTSIMFLVALSEYDQVL--VESD-----NENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLV 257 (327)
T ss_dssp GGGCSSCSEEEEEEEGGGGGCBC--SSCT-----TSBHHHHHHHHHHHHHTSGGGTTCEEEEEEECHHHHHHHTTTSCGG
T ss_pred HHHhCCCCEEEEEEECccccccc--cccc-----cHhHHHHHHHHHHHHhhhhccCCceEEEEEECchhhhhhhccchHh
Confidence 99999999999999999999999 5554 4899999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHHHHHHHHhhhhhcccCC
Q 042025 745 TCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFKYIREVLKWDDEKEDNY 822 (844)
Q Consensus 745 ~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~~V~e~Ik~~~~k~~~~ 822 (844)
. |||+|.|.. ++ .++|.+||.++|++++. ...+.+|.|+|||+|+.+|+.+|+.|.++|+..+++..|+
T Consensus 258 ~--~fp~y~g~~---~~---~e~a~~fi~~~F~~~~~-~~~~~i~~~~TsA~d~~nV~~vF~~v~~~Il~~~l~~~~l 326 (327)
T 3ohm_A 258 D--YFPEYDGPQ---RD---AQAAREFILKMFVDLNP-DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNL 326 (327)
T ss_dssp G--TCTTCCSCS---SC---HHHHHHHHHHHHHSSCT-TTTSCEEEEECCTTCHHHHHHHHHHHHHHHHHTTCC----
T ss_pred h--hchhccCCC---CC---HHHHHHHHHHHHHhhcc-cccCCcEEEEEEeecCHHHHHHHHHHHHHHHHHhHHhcCC
Confidence 5 599999731 12 78999999999999874 3468899999999999999999999999999999988764
No 2
>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...
Probab=100.00 E-value=6.7e-71 Score=602.03 Aligned_cols=341 Identities=27% Similarity=0.478 Sum_probs=283.0
Q ss_pred CcccccccccCchhhhhh-----cceeeEEEeeccCCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042025 408 GHRDEASNYTTVPNYLEQ-----KKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYRYLSILLDG 482 (844)
Q Consensus 408 ~~~e~~~~S~~Id~~Le~-----k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~eEr~~~r~iIqsNi~~sm~~LLea 482 (844)
+.+++..+|++||++|++ ++.+||||||+||||||||+|||||||++||+++|+..||.+||.|++++|+.||++
T Consensus 7 ~~~~~~~~s~~id~~l~~~~~~~~~~~klLlLG~geSGKST~~KQmkii~~~g~~~~e~~~~~~~i~~N~~~~~~~l~~~ 86 (353)
T 1cip_A 7 EDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRA 86 (353)
T ss_dssp ------------------------CEEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcccceEEEEcCCCCCchhHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777899999999988 568999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHhhccCCCCCcccccCCCCCCCCccccccccCchhhhhhHHHHhhhhcCCCCccCcccchhHHHHHHHhcC
Q 042025 483 RERFEEEATARMNAQGSHDQISEAGGEADPSETTQCIYSINPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVDEVWK 562 (844)
Q Consensus 483 ~e~feee~l~~~~~~~~~~e~s~~~~~~~~~~~~~~Iysi~p~~k~fsd~ll~i~~~g~ld~~~P~~t~E~a~~I~~LW~ 562 (844)
|+.|++ .+. ++.++..+++++.+....+ +. .++++++++|..||+
T Consensus 87 ~~~~~i---------~~~----------------------~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~i~~lw~ 131 (353)
T 1cip_A 87 MGRLKI---------DFG----------------------DAARADDARQLFVLAGAAE-EG---FMTAELAGVIKRLWK 131 (353)
T ss_dssp HHHHTC---------CCS----------------------STTHHHHHHHHHHHHHHHT-TT---CCCHHHHHHHHHHHH
T ss_pred HHHhCC---------CCC----------------------CcchHHHHHHHHhhccccc-cc---cCCHHHHHHHHHHHC
Confidence 998753 222 2334556677776644321 11 235799999999999
Q ss_pred CHHHHHHHhccccccccccchhhcccccccccCCCCCCCccceeEeeccccCCceEEEEEEecCCCCCCccccCcccCCC
Q 042025 563 DPAIQETYKRKDELHFLPDVAEYFLSRAVEVSSNEYEPSDRDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTDNLEVQP 642 (844)
Q Consensus 563 DpaIQ~ty~Rr~Ef~~L~DsA~YFLd~l~RI~~~dY~PTd~DILraR~~TtG~GI~e~eF~~~~~~~~~~~~~~~~~~~~ 642 (844)
||+||+||.||+||+ |+|+|.|||++++||+.++|.||++|||++|.+|+| +.+..|.++.
T Consensus 132 d~~iq~~~~~~~e~~-l~dsa~yfl~~~~ri~~~~Y~PT~~Dil~~~~~T~G--i~~~~~~~~~---------------- 192 (353)
T 1cip_A 132 DSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTG--IVETHFTFKD---------------- 192 (353)
T ss_dssp CHHHHHHHTTGGGSC-CCTTHHHHHTTHHHHTSTTCCCCHHHHHTCCCCCCS--EEEEEEEETT----------------
T ss_pred CHHHHHHHHhhhhcc-cCccHHHHHHHHHHHhcCCCCCCccccccccCceec--eEEEEEeeCC----------------
Confidence 999999999999999 999999999999999999999999999999999988 8888887753
Q ss_pred CCCceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCC
Q 042025 643 QPLTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDT 722 (844)
Q Consensus 643 ~~~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~t 722 (844)
+++++||+||| +.+|++|.+||+++++||||+|+++|||++ .||+ ..|||++++.+|++++++++|.++
T Consensus 193 ---~~l~iwDt~GQ-e~~r~~w~~yf~~a~~iIfV~dls~~d~~l--~ed~-----~~nr~~e~~~~~~~i~~~~~~~~~ 261 (353)
T 1cip_A 193 ---LHFKMFDVGGQ-RSERKKWIHCFEGVTAIIFCVALSDYDLVL--AEDE-----EMNRMHESMKLFDSICNNKWFTDT 261 (353)
T ss_dssp ---EEEEEEEECCS-GGGGGGGGGGCTTCSEEEEEEEGGGGGCEE--TTEE-----EEEHHHHHHHHHHHHHTCGGGTTS
T ss_pred ---eeEEEEeCCCc-hhhhHHHHHHHhcCCEEEEEEECccccccc--cccc-----hhhhHHHHHHHHHHHHcCccccCC
Confidence 68999999999 899999999999999999999999999999 6765 589999999999999999999999
Q ss_pred cEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHH
Q 042025 723 PFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVD 802 (844)
Q Consensus 723 piILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ 802 (844)
|||||+||+||+++|+.+++|+.| ||+|.|. .+ .+++.+|+..+|++++.....+.+|+|.|||+|+++|+
T Consensus 262 piiLv~NK~DL~~~ki~~~~l~~~--fp~~~g~----~~---~~e~~~~~~~~f~~l~~~~~~~~~~~~etSA~~~~nV~ 332 (353)
T 1cip_A 262 SIILFLNKKDLFEEKIKKSPLTIC--YPEYAGS----NT---YEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQ 332 (353)
T ss_dssp EEEEEEECHHHHHHHHTTSCGGGT--CTTCCSC----SC---HHHHHHHHHHHHHTTCSCTTTCCEEEEECCTTCHHHHH
T ss_pred cEEEEEECcCchhhhccccchhhc--ccccCCC----CC---HHHHHHHHHHHHHHhhcccCCCceEEEEEECcCchhHH
Confidence 999999999999999999999976 9999873 12 68899999999999975323578999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccCC
Q 042025 803 EAFKYIREVLKWDDEKEDNY 822 (844)
Q Consensus 803 evF~~V~e~Ik~~~~k~~~~ 822 (844)
++|+||.+.|...+++..|+
T Consensus 333 ~vF~~v~~~i~~~~l~~~~l 352 (353)
T 1cip_A 333 FVFDAVTDVIIKNNLKDCGL 352 (353)
T ss_dssp HHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999988664
No 3
>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A*
Probab=100.00 E-value=8.7e-70 Score=602.70 Aligned_cols=364 Identities=23% Similarity=0.404 Sum_probs=282.7
Q ss_pred hccccccCCCCCCCCCcccccccccCchhhhhh-----cceeeEEEeeccCCChhhHHHHHHHHhcCCCCHH--------
Q 042025 393 VCSLLSLPVLHGQPQGHRDEASNYTTVPNYLEQ-----KKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAE-------- 459 (844)
Q Consensus 393 ~~~~~slp~p~~~~~~~~e~~~~S~~Id~~Le~-----k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~e-------- 459 (844)
|+++.|.+... ...+.+++..+|++||++|++ ++++||||||+||||||||+|||||||++||+++
T Consensus 1 mg~~~s~~~~~-~~~~~~~~~~~~~~Id~~l~~~~~~~~~~~klLLLG~geSGKSTi~KQmkiih~~gfs~~E~~~~~~~ 79 (402)
T 1azs_C 1 MGCLGNSKTED-QRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGEGGEEDPQA 79 (402)
T ss_dssp ------------------------------------CCTTEEEEEEEESTTSSHHHHHHHHHHHHCCC------------
T ss_pred CCCCCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHhhccceEEEecCCCCchhhHHHHHHHHhCCCCChHHhhhhHHH
Confidence 45566644332 124567778899999999998 5689999999999999999999999999999986
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhccCCCCCcccccCCCCCCCCccccccccCchhhhhhHH
Q 042025 460 -------ELQDIKLMIQSNMYRYLSILLDGRERFEEEATARMNAQGSHDQISEAGGEADPSETTQCIYSINPRLKHFSDW 532 (844)
Q Consensus 460 -------Er~~~r~iIqsNi~~sm~~LLea~e~feee~l~~~~~~~~~~e~s~~~~~~~~~~~~~~Iysi~p~~k~fsd~ 532 (844)
|+..|+.+|+.|++++|+.|+++|+.+.. .+.+ .++.++..+++
T Consensus 80 ~~~~~~~e~~~~~~~i~~Ni~~~~~~i~~a~~~l~~-------~i~~----------------------~~~~~~~~~~~ 130 (402)
T 1azs_C 80 ARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVP-------PVEL----------------------ANPENQFRVDY 130 (402)
T ss_dssp -------CTTHHHHHHHHHHHHHHHHHHHHHHHSSS-------CCCC----------------------SSGGGHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------Cccc----------------------CCchhHHHHHH
Confidence 56679999999999999999999986531 0111 13556677889
Q ss_pred HHhhhhcCCCCccCcccchhHHHHHHHhcCCHHHHHHHhccccccccccchhhcccccccccCCCCCCCccceeEeeccc
Q 042025 533 LLDIIATGDLDAFFPAATREYAPLVDEVWKDPAIQETYKRKDELHFLPDVAEYFLSRAVEVSSNEYEPSDRDILYAEGVT 612 (844)
Q Consensus 533 ll~i~~~g~ld~~~P~~t~E~a~~I~~LW~DpaIQ~ty~Rr~Ef~~L~DsA~YFLd~l~RI~~~dY~PTd~DILraR~~T 612 (844)
++.++..++ .. +++++++.|..||+|++||+||.||+||+ |+|++.|||++++||+.++|.||++||+++|++|
T Consensus 131 ~~~~~~~~~--~~---~~~~~~~~i~~lW~d~~iq~~~~r~~e~~-l~d~~~yfl~~~~ri~~~~Y~PT~~Dil~~r~~T 204 (402)
T 1azs_C 131 ILSVMNVPD--FD---FPPEFYEHAKALWEDEGVRACYERSNEYQ-LIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLT 204 (402)
T ss_dssp HHHTTTCSS--CC---CCHHHHHHHHHHHHCHHHHHHHTTGGGSC-CCTTHHHHHTTHHHHTCTTCCCCHHHHHHCCCCC
T ss_pred HHhhcccCC--CC---CCHHHHHHHHHHHcCHHHHHHHHhcccce-eccchhhHHHHHHHhhccccCCccccccccccce
Confidence 988765433 12 35799999999999999999999999999 9999999999999999999999999999999999
Q ss_pred cCCceEEEEEEecCCCCCCccccCcccCCCCCCceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCC
Q 042025 613 QGNGLAFIEFSLDDRSPMSETYTDNLEVQPQPLTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPES 692 (844)
Q Consensus 613 tG~GI~e~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED 692 (844)
+| +.+..|.++. ++++|||+||| +.+|++|.+||+++++||||+|+++|||++ .||
T Consensus 205 iG--i~~~~~~~~~-------------------v~l~iwDtaGQ-e~~r~~w~~yf~~a~~iIfV~dis~ydq~l--~ed 260 (402)
T 1azs_C 205 SG--IFETKFQVDK-------------------VNFHMFDVGGQ-RDERRKWIQCFNDVTAIIFVVASSSYNMVI--RED 260 (402)
T ss_dssp CS--EEEEEEEETT-------------------EEEEEEEECCS-GGGGGGGGGGTTTCCEEEEEEETTGGGCBC--TTT
T ss_pred ee--eEEEEeecCC-------------------ccceecccchh-hhhhhhhHhhccCCCEEEEEEECccccccc--ccc
Confidence 98 8888887753 68999999999 899999999999999999999999999999 666
Q ss_pred CCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhh--ccccccccccCCCCCCcCCC------CChhh
Q 042025 693 SGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVN--RVHLSTCEWFNDFSPVRTHH------NNQSL 764 (844)
Q Consensus 693 ~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~--~spLs~c~~FPDF~g~~~~~------n~~sl 764 (844)
+ ..|+|++++.+|+.|+++++|.++|||||+||+||+++|+. .++|.. |||||.+...+. ..+..
T Consensus 261 ~-----~~ns~~e~~~~~~~i~~~~~~~~~piiLvgNK~DL~~~ki~~~~~~l~~--~fp~y~~~~~~~~~~~~~g~~~~ 333 (402)
T 1azs_C 261 N-----QTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED--YFPEFARYTTPEDATPEPGEDPR 333 (402)
T ss_dssp S-----CSBHHHHHHHHHHHHHTCTTCSSCCEEEEEECHHHHHHHHHHCSSCGGG--TCGGGGTCCCCSSCCCCTTCCHH
T ss_pred c-----ccchHHHHHHHHHHHHhcccCCCCeEEEEEEChhhhhhhhcccccchhh--ccccccccccccccccccCCccc
Confidence 5 48999999999999999999999999999999999999996 457875 599998643221 11123
Q ss_pred HHHHHHHHHHHHHhhhccC--CCCcEEEEEEeecCCCCHHHHHHHHHHHHhhhhhcccCCC
Q 042025 765 AHQAYYYVAMKFKDLYASL--TGRKLFVWQARARDRVTVDEAFKYIREVLKWDDEKEDNYY 823 (844)
Q Consensus 765 ~e~A~~YI~~KFl~L~~s~--~~Rklyvh~T~AtDte~I~evF~~V~e~Ik~~~~k~~~~~ 823 (844)
.++|.+||+++|.++++.. ..+.+|+|+|||+|+++|+++|++|.++|++.+++..|+.
T Consensus 334 ~~~a~~fi~~kF~~~~~~~~~~~~~~~~~~TSA~d~~nV~~vF~~v~~~I~~~~l~~~~~~ 394 (402)
T 1azs_C 334 VTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTSSCEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhhccccccCcccEEEEEEeecCcCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6889999999999986432 1257999999999999999999999999999999987653
No 4
>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}
Probab=100.00 E-value=3.2e-70 Score=594.56 Aligned_cols=318 Identities=25% Similarity=0.410 Sum_probs=277.5
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhccCCCCCcccc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYRYLSILLDGRERFEEEATARMNAQGSHDQISE 505 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~eEr~~~r~iIqsNi~~sm~~LLea~e~feee~l~~~~~~~~~~e~s~ 505 (844)
++++||||||+||||||||+|||||||++||+++|+..||.+|++|++++|+.||++|++|+++ +.++.+
T Consensus 3 ~~~~klLLLG~geSGKSTi~KQmkii~~~gfs~~e~~~~~~~i~~N~~~~~~~li~~~~~l~i~---------~~~~~~- 72 (340)
T 4fid_A 3 AKPITVMLLGSGESGKSTIAKQLKILFGGGFPEQERATHKSSICSNVVTCMRTLIEQSAILNHP---------MKYQPK- 72 (340)
T ss_dssp -CCEEEEEEECTTSSHHHHHHHHHHHTSCCCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCC---------CSCCCC-
T ss_pred CCcceEEEECCCCCcHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCC---------CCChhh-
Confidence 5789999999999999999999999999999999999999999999999999999999988632 332211
Q ss_pred cCCCCCCCCccccccccCchhhhhhHHHHhhhhcCCCCccCcccchhHHHHHHHhcCCHHHHHHHhccccccccccchhh
Q 042025 506 AGGEADPSETTQCIYSINPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVDEVWKDPAIQETYKRKDELHFLPDVAEY 585 (844)
Q Consensus 506 ~~~~~~~~~~~~~Iysi~p~~k~fsd~ll~i~~~g~ld~~~P~~t~E~a~~I~~LW~DpaIQ~ty~Rr~Ef~~L~DsA~Y 585 (844)
+..+ +++. .. .+.++++++++|.+||+||+||+||+||+||+ |+|+|.|
T Consensus 73 ---------------------~~~~---~~~~--~~----~~~~~~~~~~~i~~lW~d~~iq~~~~r~~e~~-l~d~~~y 121 (340)
T 4fid_A 73 ---------------------SKEF---TTED--PV----TLPFSPELVGDVEALWADEGIQATYEESAKFQ-LPDCAKY 121 (340)
T ss_dssp ---------------------SGGG---SCCS--CC----CSSCCTTHHHHHHHHHHSHHHHHHHHTCTTSC-CCTTHHH
T ss_pred ---------------------HHHH---hhcc--cC----CCCCCHHHHHHHHHHHcCHHHHHHHHhccccc-ccchhhh
Confidence 1111 1111 11 12346799999999999999999999999999 9999999
Q ss_pred cccccccccCCCCCCCccceeEeeccccCCceEEEEEEecCCCCCCccccCcccCCCCCCceEEEEEeCCCCCCCcccce
Q 042025 586 FLSRAVEVSSNEYEPSDRDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTDNLEVQPQPLTKYQLIRVNAKGMNEGCKWV 665 (844)
Q Consensus 586 FLd~l~RI~~~dY~PTd~DILraR~~TtG~GI~e~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~liDVGGQ~rseR~KW~ 665 (844)
||++++||+.++|.||++|||++|.+|+| +.+..|.++. +++++||+||| +++|++|.
T Consensus 122 fl~~l~Ri~~~~Y~PT~~Dil~~~~~TiG--i~~~~~~~~~-------------------v~l~iwDtaGQ-e~~R~~w~ 179 (340)
T 4fid_A 122 LFENVKRIAMEDYVPTEEDLIHNRTKTTG--IHEYDFVVKD-------------------IPFHLIDVGGQ-RSERKXWV 179 (340)
T ss_dssp HHHTHHHHSSTTCCCCHHHHHHSCCCCCS--CEEEEEESSS-------------------CEEEEEECCSC-HHHHHHHH
T ss_pred HHHHHHHHhcccCCccccceeecccceee--eEEEEEEeee-------------------eeeccccCCCc-ccccccHH
Confidence 99999999999999999999999999988 8888888753 68999999999 89999999
Q ss_pred eccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhhcccccc
Q 042025 666 EMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLST 745 (844)
Q Consensus 666 ~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~ 745 (844)
+||+++++||||+|+|+|||++ .|+. ..|||.+++.+|++++++++|.++|||||+||+||+++|+..++++.
T Consensus 180 ~yy~~a~~iIfV~diS~ydq~l--~e~~-----~~nr~~es~~~~~~i~~~~~~~~~piiLv~NK~DL~~eki~~~~l~~ 252 (340)
T 4fid_A 180 SFFSDVDCAIFVTSLAEYDMKL--YEDG-----NTSRLTESIAVFKDIMTNEFLKGAVKLIFLNKMDLFEEKLTKVPLNT 252 (340)
T ss_dssp TTSCSCSEEEEEEEGGGTTCBC--C--C-----CSBHHHHHHHHHHHHHHCGGGTTSEEEEEEECHHHHHHHHHHSCGGG
T ss_pred HHhccCCEEEEEEECCcccccc--cccc-----ccchHHHHHHHHHHHhhhhccCCCeEEEEEECchhhhhhcCcchHHH
Confidence 9999999999999999999999 6664 48999999999999999999999999999999999999999999997
Q ss_pred ccccCCCCCCcCCCCChhhHHHHHHHHHHHH------HhhhccCC----------CCcEEEEEEeecCCCCHHHHHHHHH
Q 042025 746 CEWFNDFSPVRTHHNNQSLAHQAYYYVAMKF------KDLYASLT----------GRKLFVWQARARDRVTVDEAFKYIR 809 (844)
Q Consensus 746 c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KF------l~L~~s~~----------~Rklyvh~T~AtDte~I~evF~~V~ 809 (844)
| ||+|.|. ++ +++|.+||+++| .++++... +|.+|+|+|||+|+.+|+.+|+.|.
T Consensus 253 ~--fp~y~g~----~~---~e~a~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~h~TsA~dt~nv~~vF~~v~ 323 (340)
T 4fid_A 253 I--FPEYTGG----DN---AVMGAQYIQQLFTGKLQTEEMNISGADGTANIEGAVNEKVYTNPTNATDGSNIKRVFMLAV 323 (340)
T ss_dssp T--CTTCCCT----TC---HHHHHHHHHHHHHTTSEEEESCC--------------CEEEEEEECTTCHHHHHHHHHHHH
T ss_pred h--hhhhcCC----CC---HHHHHHHHHHhcccccchhhhhccccccccccccccCcceEEEEEEeeCcHHHHHHHHHHH
Confidence 6 9999873 22 789999999999 77664322 1789999999999999999999999
Q ss_pred HHHhhhhhcccCCC
Q 042025 810 EVLKWDDEKEDNYY 823 (844)
Q Consensus 810 e~Ik~~~~k~~~~~ 823 (844)
++|+. ++++.|+.
T Consensus 324 ~~Il~-~l~~~~~~ 336 (340)
T 4fid_A 324 DVIMK-NMAANGKM 336 (340)
T ss_dssp HHHHH-HHHHTTCC
T ss_pred HHHHH-HHHHcCCC
Confidence 99999 99987754
No 5
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=100.00 E-value=7.3e-69 Score=587.76 Aligned_cols=342 Identities=25% Similarity=0.462 Sum_probs=273.3
Q ss_pred CcccccccccCchhhhhh-----cceeeEEEeeccCCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042025 408 GHRDEASNYTTVPNYLEQ-----KKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYRYLSILLDG 482 (844)
Q Consensus 408 ~~~e~~~~S~~Id~~Le~-----k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~eEr~~~r~iIqsNi~~sm~~LLea 482 (844)
+.+++..+|++||++|++ ++.+||||||++|||||||+|||||+|++||+++|++.|+.+|+.|++++|+.||++
T Consensus 8 ~~~~~~~~s~~Id~~l~~~~~~~~~~~killlG~~~SGKST~~kq~~i~~~~~~~~~e~~~~~~~i~~n~~~s~~~il~a 87 (362)
T 1zcb_A 8 EDKAAVERSKMIDRNLREDGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDA 87 (362)
T ss_dssp -----------------------CCCEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCccEEEEECCCCCcHHHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777889999999988 568999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHhhccCCCCCcccccCCCCCCCCccccccccCchhhhhhHHHHhhh------hcCCCCccCcccchhHHHH
Q 042025 483 RERFEEEATARMNAQGSHDQISEAGGEADPSETTQCIYSINPRLKHFSDWLLDII------ATGDLDAFFPAATREYAPL 556 (844)
Q Consensus 483 ~e~feee~l~~~~~~~~~~e~s~~~~~~~~~~~~~~Iysi~p~~k~fsd~ll~i~------~~g~ld~~~P~~t~E~a~~ 556 (844)
|+.|++ .+.+ +.++..+++++.+. +.|.++. ..+ ++++++
T Consensus 88 ~~~~~i---------~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~ 133 (362)
T 1zcb_A 88 REKLHI---------PWGD----------------------NKNQLHGDKLMAFDTRAPMAAQGMVET--RVF-LQYLPA 133 (362)
T ss_dssp HHHTTC---------CCSS----------------------GGGHHHHHHHHTSCSSSHHHHTTCCCH--HHH-HHHHHH
T ss_pred HHHcCC---------CCCC----------------------cccHHHHHHHHhhcccccccccccCcc--hhH-HHHHHH
Confidence 998752 2222 22233444444332 2222221 123 799999
Q ss_pred HHHhcCCHHHHHHHhccccccccccchhhcccccccccCCCCCCCccceeEeeccccCCceEEEEEEecCCCCCCccccC
Q 042025 557 VDEVWKDPAIQETYKRKDELHFLPDVAEYFLSRAVEVSSNEYEPSDRDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTD 636 (844)
Q Consensus 557 I~~LW~DpaIQ~ty~Rr~Ef~~L~DsA~YFLd~l~RI~~~dY~PTd~DILraR~~TtG~GI~e~eF~~~~~~~~~~~~~~ 636 (844)
|..||+||+||+||+||+||+ |+|++.|||++++||+.++|.||++||+++|.+|+| +.+..|.++.
T Consensus 134 i~~LW~d~~iq~~~~r~~e~~-l~ds~~yfl~~~~ri~~~~Y~PT~~Dil~~r~~T~G--i~~~~~~~~~---------- 200 (362)
T 1zcb_A 134 IRALWEDSGIQNAYDRRREFQ-LGESVKYFLDNLDKLGVPDYIPSQQDILLARRPTKG--IHEYDFEIKN---------- 200 (362)
T ss_dssp HHHHHHCHHHHHHHHTGGGSC-CCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCSS--EEEEEEEETT----------
T ss_pred HHHHHCCHHHHHHHHhcchhh-hcccHHHHHHHHHHHhcCCCCCChhhhhhccCCccc--eEEEEeeeCC----------
Confidence 999999999999999999999 999999999999999999999999999999999988 8888887753
Q ss_pred cccCCCCCCceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 637 NLEVQPQPLTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 637 ~~~~~~~~~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
++|++||+||| +.+|++|.+||+++++||||+|+++|||++ .||+ ..|||++++.+|++++++
T Consensus 201 ---------~~l~i~Dt~Gq-~~~r~~w~~~f~~~~~iIfv~dls~~dq~l--~ed~-----~~n~~~es~~~~~~i~~~ 263 (362)
T 1zcb_A 201 ---------VPFKMVDVGGQ-RSERKRWFECFDSVTSILFLVSSSEFDQVL--MEDR-----QTNRLTESLNIFETIVNN 263 (362)
T ss_dssp ---------EEEEEEEECC--------CTTSCTTCCEEEEEEETTCTTCEE--TTEE-----EEEHHHHHHHHHHHHHTC
T ss_pred ---------eEEEEEeccch-hhhhhhHHHHhCCCCEEEEEEECccccccc--cccc-----cccHHHHHHHHHHHHhcc
Confidence 68999999999 899999999999999999999999999999 6764 589999999999999999
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
++|.++|+|||+||+||+++|+..++|+.| ||||.|. . .+ .+++.+|+..+|+++++....+.+|+|+|||+
T Consensus 264 ~~~~~~piILv~NK~DL~~~ki~~~~l~~~--fp~y~g~--~-~~---~~e~~~~~~~~f~~l~~~~~~~~~~~~~tSA~ 335 (362)
T 1zcb_A 264 RVFSNVSIILFLNKTDLLEEKVQVVSIKDY--FLEFEGD--P-HC---LRDVQKFLVECFRGKRRDQQQRPLYHHFTTAI 335 (362)
T ss_dssp GGGTTSEEEEEEECHHHHHHHTTTCCGGGT--CTTCCSC--T-TC---HHHHHHHHHHHHHTTCSSCC--CCEEEECCTT
T ss_pred hhhCCCCEEEEEEChhhhhhhccccchhhc--CccccCC--C-CC---HHHHHHHHHHHHHHhhcccCCCceEEEEEecC
Confidence 999999999999999999999999999976 9999863 0 11 68899999999999875222578999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhhhcccCC
Q 042025 797 DRVTVDEAFKYIREVLKWDDEKEDNY 822 (844)
Q Consensus 797 Dte~I~evF~~V~e~Ik~~~~k~~~~ 822 (844)
|+++|+++|++|.++|...+++. |+
T Consensus 336 d~~nV~~vF~~v~~~i~~~~l~~-~l 360 (362)
T 1zcb_A 336 NTENIRLVFRDVKDTILHDNLKQ-LM 360 (362)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CchhHHHHHHHHHHHHHHHHHHh-hc
Confidence 99999999999999999999988 64
No 6
>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-67 Score=575.78 Aligned_cols=342 Identities=36% Similarity=0.661 Sum_probs=293.8
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhccCCCCCcccc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYGNKFTAEELQDIKLMIQSNMYRYLSILLDGRERFEEEATARMNAQGSHDQISE 505 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~~gFS~eEr~~~r~iIqsNi~~sm~~LLea~e~feee~l~~~~~~~~~~e~s~ 505 (844)
.+++||||||+||||||||+|||||+|.+||+++|+..|+.+|+.|++++|+.||++|+.|+++. .+
T Consensus 7 ~~~~k~lllG~~~sGKsT~~kq~~~~~~~g~~~~e~~~~~~~i~~Ni~~~~~~ll~a~~~l~~~~---------~~---- 73 (354)
T 2xtz_A 7 IHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKLLHDGTKEFAQNE---------TD---- 73 (354)
T ss_dssp CEEEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHC---------SS----
T ss_pred CCceeEEEECCCCCcHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---------cc----
Confidence 35789999999999999999999999999999999999999999999999999999999886541 10
Q ss_pred cCCCCCCCCccccccccCchhhhhhHHHHhhhhcCCCCccCcccchhHHHHHHHhcCCHHHHHHHhccccccccccchhh
Q 042025 506 AGGEADPSETTQCIYSINPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVDEVWKDPAIQETYKRKDELHFLPDVAEY 585 (844)
Q Consensus 506 ~~~~~~~~~~~~~Iysi~p~~k~fsd~ll~i~~~g~ld~~~P~~t~E~a~~I~~LW~DpaIQ~ty~Rr~Ef~~L~DsA~Y 585 (844)
...|.+++.++++++++..+....+ ++.++++++++|.+||+||+||+||.||+||+ |+|++.|
T Consensus 74 -----------~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~LW~D~~vq~~~~r~~e~~-l~d~~~y 137 (354)
T 2xtz_A 74 -----------SAKYMLSSESIAIGEKLSEIGGRLD----YPRLTKDIAEGIETLWKDPAIQETCARGNELQ-VPDCTKY 137 (354)
T ss_dssp -----------CCTTCCCHHHHHHHHHHHHHHHHCS----SCCCCHHHHHHHHHHTTCHHHHHHHTTGGGTT-CCTTHHH
T ss_pred -----------cccccCChhHHHHHHHHHhcccccc----cccCCHHHHHHHHHHHCCHHHHHHHHhcchhh-hhccHHH
Confidence 1224456777888888776643322 24457899999999999999999999999999 9999999
Q ss_pred cccccccccCCCCCCCccceeEeeccccCCceEEEEEEecCCCCCCccccCcccCCCCCCceEEEEEeCCCCCCCcccce
Q 042025 586 FLSRAVEVSSNEYEPSDRDILYAEGVTQGNGLAFIEFSLDDRSPMSETYTDNLEVQPQPLTKYQLIRVNAKGMNEGCKWV 665 (844)
Q Consensus 586 FLd~l~RI~~~dY~PTd~DILraR~~TtG~GI~e~eF~~~~~~~~~~~~~~~~~~~~~~~~~~~liDVGGQ~rseR~KW~ 665 (844)
||++++||+.++|.||.+|++++|.+|+| |.++.|.++... ....+++++||+||| ..+|++|.
T Consensus 138 fl~~~~ri~~~~Y~PT~~D~~~~r~~T~G--i~e~~f~~~~~~-------------~~~~v~l~iwDtaGQ-e~~r~~~~ 201 (354)
T 2xtz_A 138 LMENLKRLSDINYIPTKEDVLYARVRTTG--VVEIQFSPVGEN-------------KKSGEVYRLFDVGGQ-RNERRKWI 201 (354)
T ss_dssp HHTSHHHHHSTTCCCCHHHHHHCCCCCCS--EEEEEECCCCE-------------------EEEEEEECCS-TTGGGGTG
T ss_pred HHHHHHHHhcCCCCCCchheeeecccccc--eeeEEEEeccCc-------------cccceeeEEEECCCc-hhhhHHHH
Confidence 99999999999999999999999999988 999999875300 001478999999999 89999999
Q ss_pred eccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhhcccccc
Q 042025 666 EMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLST 745 (844)
Q Consensus 666 ~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~ 745 (844)
+||+++++||||+|+++|||++ .|+. ..|+|++++.+|+.+++++++.++|+|||+||+||+++|+.+++++.
T Consensus 202 ~y~~~~~~iI~v~dis~ydq~l--~e~~-----~~~s~~~~~~~~~~i~~~~~~~~~piiLvgNK~DL~~~k~~~v~l~~ 274 (354)
T 2xtz_A 202 HLFEGVTAVIFCAAISEYDQTL--FEDE-----QKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKVLDVPLNV 274 (354)
T ss_dssp GGCTTEEEEEEEEEGGGTTCBC--SSCT-----TSBHHHHHHHHHHHHHTCGGGSSCEEEEEEECHHHHHHHTTTSCGGG
T ss_pred HHhCCCCEEEEEEECccccccc--cccc-----chhHHHHHHHHHHHHHhccccCCCeEEEEEECcchhhhhcccccccc
Confidence 9999999999999999999999 5654 48999999999999999999999999999999999999998899999
Q ss_pred ccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccC-----CCCcEEEEEEeecCCCCHHHHHHHHHHHHhhhhhccc
Q 042025 746 CEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASL-----TGRKLFVWQARARDRVTVDEAFKYIREVLKWDDEKED 820 (844)
Q Consensus 746 c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~-----~~Rklyvh~T~AtDte~I~evF~~V~e~Ik~~~~k~~ 820 (844)
|+|||||.|...+ +...++|.+|++++|.+++... .++.+|+|.|||+|+++|+++|++|.+.|++.+++..
T Consensus 275 ~~~fp~y~~~~~~---~~~~~~a~~~~~~~f~~l~~~~~~~~~~~~~~~~~eTSA~d~~nV~~vF~~v~~~I~~~~l~~~ 351 (354)
T 2xtz_A 275 CEWFRDYQPVSSG---KQEIEHAYEFVKKKFEELYYQNTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLLEA 351 (354)
T ss_dssp SGGGTTCCCCSSH---HHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccccccccCC---CcCHHHHHHHHHHHHHHhhhccccccccCcceEEEEEEeecchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999864321 1126889999999998874211 1467999999999999999999999999999999887
Q ss_pred CC
Q 042025 821 NY 822 (844)
Q Consensus 821 ~~ 822 (844)
|+
T Consensus 352 ~l 353 (354)
T 2xtz_A 352 GL 353 (354)
T ss_dssp --
T ss_pred cC
Confidence 64
No 7
>3l82_B F-box only protein 4; TRFH domain, helix, GTPase domain, acetylation, ADP- ribosylation, alternative splicing, cell cycle, cell division; 2.40A {Homo sapiens}
Probab=99.54 E-value=3.3e-15 Score=153.67 Aligned_cols=113 Identities=11% Similarity=0.108 Sum_probs=79.7
Q ss_pred EeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHH---HHHHcCCC-CCCCcEEEE
Q 042025 652 RVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELF---EMMIRHPC-FKDTPFVLI 727 (844)
Q Consensus 652 DVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LF---esI~n~p~-f~~tpiILf 727 (844)
++||| .+.|..|.|||+++++||||||++| ..|+ ++++.| ..++++.. ++++|++||
T Consensus 108 ~~GGQ-~klRplWr~Yy~~TdglIfVVDSsD-----------------~~R~-eak~EL~eL~~mL~ee~~L~gapLLVl 168 (227)
T 3l82_B 108 QQGSR-YSVIPQIQKVCEVVDGFIYVANAEA-----------------HKRH-EWQDEFSHIMAMTDPAFGSSGRPLLVL 168 (227)
T ss_dssp ----------CCHHHHHHHCSEEEEEEECBT-----------------TCCC-CHHHHHHHHHHHSCTTSSCSCSCEEEE
T ss_pred ccCcH-HHHHHHHHHHhcCCCEEEEEecccc-----------------HhHH-HHHHHHHHHHHHhcchhhhCCCeEEEE
Confidence 68999 8999999999999999999999996 2233 377777 56677764 689999999
Q ss_pred eccc-chhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHH
Q 042025 728 LNKY-DLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFK 806 (844)
Q Consensus 728 LNK~-DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~ 806 (844)
+||+ |+... ++ +.+ |.++ +.|.. . +|.|+|+.|||++|+++.++|+
T Consensus 169 ANKqqDlp~A------ms--------------------~~E----I~e~-L~L~~-l-~R~W~Iq~csA~TGeGL~EGLd 215 (227)
T 3l82_B 169 SCISQGDVKR------MP--------------------CFY----LAHE-LHLNL-L-NHPWLVQDTEAETLTGFLNGIE 215 (227)
T ss_dssp EEESSTTSCB------CC--------------------HHH----HHHH-TTGGG-G-CSCEEEEEEETTTCTTHHHHHH
T ss_pred eCCCcCccCC------CC--------------------HHH----HHHH-cCCcC-C-CCCEEEEEeECCCCcCHHHHHH
Confidence 9995 77432 22 222 3332 56654 4 5999999999999999999999
Q ss_pred HHHHHHhhhh
Q 042025 807 YIREVLKWDD 816 (844)
Q Consensus 807 ~V~e~Ik~~~ 816 (844)
|+.+.++.++
T Consensus 216 WL~~~l~~k~ 225 (227)
T 3l82_B 216 WILEEVESKR 225 (227)
T ss_dssp HHTTTTTTC-
T ss_pred HHHHHHHhhc
Confidence 9998876543
No 8
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=99.46 E-value=2.4e-14 Score=153.22 Aligned_cols=113 Identities=11% Similarity=0.102 Sum_probs=83.8
Q ss_pred EeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHH---HHHcCCC-CCCCcEEEE
Q 042025 652 RVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFE---MMIRHPC-FKDTPFVLI 727 (844)
Q Consensus 652 DVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFe---sI~n~p~-f~~tpiILf 727 (844)
|+||| .+.|..|.|||+++++||||||++| ..|+. +++.|+ .++++.. ++++|++||
T Consensus 193 ~~GGQ-~~lRplWr~Yy~~tdglIfVVDSsD-----------------reRle-ak~EL~eL~~mL~e~~~l~~apLLVf 253 (312)
T 3l2o_B 193 QQGSR-YSVIPQIQKVCEVVDGFIYVANAEA-----------------HKRHE-WQDEFSHIMAMTDPAFGSSGRPLLVL 253 (312)
T ss_dssp ----C-CCCCHHHHHHHHHCSEEEECCBCBT-----------------TCCCC-HHHHHHHHHHHHCHHHHCTTCCEEEE
T ss_pred CCCCH-HHHHHHHHHHhcCCCEEEEEecCCc-----------------HhHHH-HHHHHHHHHHHhcchhhcCCCeEEEE
Confidence 58999 8999999999999999999999996 33443 666555 6777654 789999999
Q ss_pred ecc-cchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHH
Q 042025 728 LNK-YDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFK 806 (844)
Q Consensus 728 LNK-~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~ 806 (844)
+|| +|+... ++ +.+ |.++ ++|.. . +|.|+|+.|||++|+|+.++|+
T Consensus 254 ANKkQDlp~A------ms--------------------~~E----I~e~-L~L~~-l-~r~W~Iq~csA~tGeGL~EGld 300 (312)
T 3l2o_B 254 SCISQGDVKR------MP--------------------CFY----LAHE-LHLNL-L-NHPWLVQDTEAETLTGFLNGIE 300 (312)
T ss_dssp EEESSTTSCB------CC--------------------HHH----HHHH-TTGGG-G-CSCEEEEEEETTTCTTHHHHHH
T ss_pred eCCcccccCC------CC--------------------HHH----HHHH-cCCcc-C-CCcEEEEecccCCCcCHHHHHH
Confidence 997 588542 22 122 3332 56654 3 5899999999999999999999
Q ss_pred HHHHHHhhhh
Q 042025 807 YIREVLKWDD 816 (844)
Q Consensus 807 ~V~e~Ik~~~ 816 (844)
|+.+.++.+.
T Consensus 301 WL~~~l~~k~ 310 (312)
T 3l2o_B 301 WILEEVESKR 310 (312)
T ss_dssp HHHHHSCC--
T ss_pred HHHHHHHhhc
Confidence 9999886543
No 9
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=99.33 E-value=1.9e-11 Score=113.86 Aligned_cols=116 Identities=15% Similarity=0.209 Sum_probs=82.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+.......+.|++
T Consensus 51 ~~~~l~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 112 (167)
T 1c1y_A 51 CMLEILDTAGT-EQFTAMRDLYMKNGQGFALVYSITA-----------------QSTFNDLQDLREQILRVKDTEDVPMI 112 (167)
T ss_dssp EEEEEEEECSS-CSSTTHHHHHHHHCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHHCCSCCCEE
T ss_pred EEEEEEECCCh-HHHHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhhCcCCCcEE
Confidence 57899999999 7788899999999999999999885 22333444455555554334678999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++.. + + ..+.++.+||.++.+|+++|
T Consensus 113 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-~---~------~~~~~~~~Sa~~~~gi~~l~ 158 (167)
T 1c1y_A 113 LVGNKCDLEDER----VVG--------------------KEQGQNLAR-Q---W------CNCAFLESSAKSKINVNEIF 158 (167)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHH-H---T------TSCEEEECBTTTTBSHHHHH
T ss_pred EEEECccccccc----cCC--------------------HHHHHHHHH-H---c------cCCcEEEecCCCCCCHHHHH
Confidence 999999997641 010 123322221 1 1 13457889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
+++.+.+.
T Consensus 159 ~~l~~~i~ 166 (167)
T 1c1y_A 159 YDLVRQIN 166 (167)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998764
No 10
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=99.31 E-value=2.6e-11 Score=115.08 Aligned_cols=118 Identities=14% Similarity=0.231 Sum_probs=86.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.....+++.+.......+.|++
T Consensus 66 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 127 (187)
T 2a9k_A 66 VQIDILDTAGQ-EDYAAIRDNYFRSGEGFLCVFSITE-----------------MESFAATADFREQILRVKEDENVPFL 127 (187)
T ss_dssp EEEEEEECCCT-TCCHHHHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHCCTTCCEE
T ss_pred EEEEEEECCCC-cccHHHHHHHhccCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 7778899999999999999999985 23444555566666665444578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+++.++.. . ..+.++.+||.++.+|+++|
T Consensus 128 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~----~-------~~~~~~~~Sa~~~~gi~~l~ 172 (187)
T 2a9k_A 128 LVGNKSDLEDKR----QVS--------------------VEEAKNRAE----Q-------WNVNYVETSAKTRANVDKVF 172 (187)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH----H-------TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccC----ccC--------------------HHHHHHHHH----H-------cCCeEEEeCCCCCCCHHHHH
Confidence 999999996541 111 233333221 1 12457889999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
++|.+.+....
T Consensus 173 ~~l~~~i~~~~ 183 (187)
T 2a9k_A 173 FDLMREIRARK 183 (187)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999886543
No 11
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=99.30 E-value=6.7e-11 Score=115.75 Aligned_cols=120 Identities=13% Similarity=0.134 Sum_probs=85.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+......+..+.......+.|+|
T Consensus 72 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 133 (201)
T 3oes_A 72 FHLHLVDTAGQ-DEYSILPYSFIIGVHGYVLVYSVTS-----------------LHSFQVIESLYQKLHEGHGKTRVPVV 133 (201)
T ss_dssp EEEEEEEECCC-CTTCCCCGGGTTTCCEEEEEEETTC-----------------HHHHHHHHHHHHHHHC-----CCCEE
T ss_pred EEEEEEECCCc-cchHHHHHHHHhcCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 57899999999 7888899999999999999999985 34455666777777776555688999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+..+.. .. .+.++.|||.++.+|+++|
T Consensus 134 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~-----~~------~~~~~~~Sa~~~~~v~~l~ 178 (201)
T 3oes_A 134 LVGNKADLSPER----EVQ--------------------AVEGKKLAE-----SW------GATFMESSARENQLTQGIF 178 (201)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHH-----HH------TCEEEECCTTCHHHHHHHH
T ss_pred EEEECccCcccc----ccC--------------------HHHHHHHHH-----Hh------CCeEEEEeCCCCCCHHHHH
Confidence 999999987541 111 123322221 11 1357889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 179 ~~l~~~i~~~~~~ 191 (201)
T 3oes_A 179 TKVIQEIARVENS 191 (201)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHhhhhh
Confidence 9999988665543
No 12
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=99.30 E-value=5.4e-11 Score=112.38 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=76.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+. ...+.+-+..+....+.....+.|++
T Consensus 58 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s--------------~~~~~~~~~~~~~~~~~~~~~~~p~i 122 (182)
T 1ky3_A 58 ATMQVWDTAGQ-ERFQSLGVAFYRGADCCVLVYDVTNASS--------------FENIKSWRDEFLVHANVNSPETFPFV 122 (182)
T ss_dssp EEEEEECCC-----------CCSTTCCEEEEEEETTCHHH--------------HHTHHHHHHHHHHHHCCSCTTTCCEE
T ss_pred EEEEEEECCCC-hHhhhhhHHHhhcCCEEEEEEECCChHH--------------HHHHHHHHHHHHHHhcccCcCCCcEE
Confidence 57899999999 7788899999999999999999986221 22233333444444444445678999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ ... . .+++.+|. ... ..+.++.|||.++.+|+++|
T Consensus 123 lv~nK~Dl~~~~---~~v-----------------~---~~~~~~~~-----~~~-----~~~~~~~~Sa~~~~gi~~l~ 169 (182)
T 1ky3_A 123 ILGNKIDAEESK---KIV-----------------S---EKSAQELA-----KSL-----GDIPLFLTSAKNAINVDTAF 169 (182)
T ss_dssp EEEECTTSCGGG---CCS-----------------C---HHHHHHHH-----HHT-----TSCCEEEEBTTTTBSHHHHH
T ss_pred EEEECCcccccc---ccC-----------------C---HHHHHHHH-----Hhc-----CCCeEEEEecCCCCCHHHHH
Confidence 999999986431 000 0 22333322 111 23447889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+..+++
T Consensus 170 ~~l~~~~~~~~~ 181 (182)
T 1ky3_A 170 EEIARSALQQNQ 181 (182)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhc
Confidence 999998876654
No 13
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=99.29 E-value=3.2e-11 Score=111.89 Aligned_cols=116 Identities=15% Similarity=0.228 Sum_probs=82.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+......++.+.......+.|++
T Consensus 52 ~~~~l~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 113 (168)
T 1u8z_A 52 VQIDILDTAGQ-EDYAAIRDNYFRSGEGFLCVFSITE-----------------MESFAATADFREQILRVKEDENVPFL 113 (168)
T ss_dssp EEEEEEECCC----CHHHHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHCCTTSCEE
T ss_pred EEEEEEECCCc-chhHHHHHHHhhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 46889999999 6778899999999999999999985 23344555556666655445578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++... ..+.++.+||.++.+|+++|
T Consensus 114 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~~-----------~~~~~~~~Sa~~~~gi~~l~ 158 (168)
T 1u8z_A 114 LVGNKSDLEDKR----QVS--------------------VEEAKNRADQ-----------WNVNYVETSAKTRANVDKVF 158 (168)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHHH-----------HTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccC----ccC--------------------HHHHHHHHHH-----------cCCeEEEeCCCCCCCHHHHH
Confidence 999999997541 111 2333333221 12457889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+|+.+.+..
T Consensus 159 ~~l~~~i~~ 167 (168)
T 1u8z_A 159 FDLMREIRA 167 (168)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999988753
No 14
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=99.29 E-value=4.2e-11 Score=116.13 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=87.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+......++.+.......+.|++
T Consensus 62 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 123 (206)
T 2bov_A 62 VQIDILDTAGQ-EDYAAIRDNYFRSGEGFLCVFSITE-----------------MESFAATADFREQILRVKEDENVPFL 123 (206)
T ss_dssp EEEEEEECCCT-TCCHHHHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHTTCSCCCEE
T ss_pred EEEEEEcCCCh-hhhHHHHHHHHhhCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 7778889999999999999999985 23445555666666665445579999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++... . .+.++.+||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~~----~-------~~~~~~~Sa~~g~gi~~l~ 168 (206)
T 2bov_A 124 LVGNKSDLEDKR----QVS--------------------VEEAKNRAEQ----W-------NVNYVETSAKTRANVDKVF 168 (206)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHHH----H-------TCEEEEECTTTCTTHHHHH
T ss_pred EEEeccCccccc----ccc--------------------HHHHHHHHHH----h-------CCeEEEEeCCCCCCHHHHH
Confidence 999999986541 111 2334333321 1 2357889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
+||.+.+.....
T Consensus 169 ~~l~~~i~~~~~ 180 (206)
T 2bov_A 169 FDLMREIRARKM 180 (206)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHccc
Confidence 999998866543
No 15
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=99.25 E-value=9.3e-11 Score=109.32 Aligned_cols=114 Identities=18% Similarity=0.265 Sum_probs=79.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++-+ .+.+....++.+.... .+.|++
T Consensus 54 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~-----------------s~~~~~~~~~~i~~~~--~~~pii 113 (168)
T 1z2a_A 54 VRLMLWDTAGQ-EEFDAITKAYYRGAQACVLVFSTTDRE-----------------SFEAISSWREKVVAEV--GDIPTA 113 (168)
T ss_dssp EEEEEECCTTG-GGTTCCCHHHHTTCCEEEEEEETTCHH-----------------HHHTHHHHHHHHHHHH--CSCCEE
T ss_pred EEEEEEcCCCc-HhHHHHHHHHhcCCCEEEEEEECcCHH-----------------HHHHHHHHHHHHHHhC--CCCCEE
Confidence 57899999999 677888999999999999999998521 2222333334443322 578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++.. + . .+.++.+||.++.+|+++|
T Consensus 114 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-~----~------~~~~~~~Sa~~~~~i~~l~ 158 (168)
T 1z2a_A 114 LVQNKIDLLDDS----CIK--------------------NEEAEGLAK-R----L------KLRFYRTSVKEDLNVSEVF 158 (168)
T ss_dssp EEEECGGGGGGC----SSC--------------------HHHHHHHHH-H----H------TCEEEECBTTTTBSSHHHH
T ss_pred EEEECcccCccc----ccC--------------------HHHHHHHHH-H----c------CCeEEEEecCCCCCHHHHH
Confidence 999999997641 111 123333221 1 1 2357889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 159 ~~l~~~~~~ 167 (168)
T 1z2a_A 159 KYLAEKHLQ 167 (168)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988753
No 16
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=99.22 E-value=1.7e-10 Score=110.10 Aligned_cols=118 Identities=13% Similarity=0.072 Sum_probs=82.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+......+..+.... -.+.|++
T Consensus 59 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~~-~~~~pii 119 (186)
T 2bme_A 59 VKLQIWDTAGQ-ERFRSVTRSYYRGAAGALLVYDITSR-----------------ETYNALTNWLTDARMLA-SQNIVII 119 (186)
T ss_dssp EEEEEEEECCS-GGGHHHHHTTSTTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHHhcCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57899999999 77788899999999999999999852 22222233344333321 1478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++.. . ..+.++.|||.++.+|+++|
T Consensus 120 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~~~gi~~l~ 164 (186)
T 2bme_A 120 LCGNKKDLDADR----EVT--------------------FLEASRFAQ-----E------NELMFLETSALTGENVEEAF 164 (186)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHHH-----H------cCCEEEEecCCCCCCHHHHH
Confidence 999999996531 111 223333221 1 23568889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
+++.+.+.....
T Consensus 165 ~~l~~~~~~~~~ 176 (186)
T 2bme_A 165 VQCARKILNKIE 176 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999998876543
No 17
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=99.22 E-value=1.9e-10 Score=109.59 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=83.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|+|+|+++ ...+......++.+.......+.|++
T Consensus 54 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~i 115 (181)
T 3t5g_A 54 YHLQLVDTAGQ-DEYSIFPQTYSIDINGYILVYSVTS-----------------IKSFEVIKVIHGKLLDMVGKVQIPIM 115 (181)
T ss_dssp EEEEEEECCCC-CTTCCCCGGGTTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHC----CCEE
T ss_pred EEEEEEeCCCc-hhhhHHHHHHHhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 7778899999999999999999985 23444555566666665444578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.++.. . ..+.++.+||.++.+|+++|
T Consensus 116 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~~~~v~~l~ 160 (181)
T 3t5g_A 116 LVGNKKDLHMER----VIS--------------------YEEGKALAE-----S------WNAAFLESSAKENQTAVDVF 160 (181)
T ss_dssp EEEECTTCTTTC----CSC--------------------HHHHHHHHH-----H------TTCEEEECCTTSHHHHHHHH
T ss_pred EEEECccchhcc----eec--------------------HHHHHHHHH-----H------hCCcEEEEecCCCCCHHHHH
Confidence 999999986431 111 233333221 1 12357889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
+++.+.+...+.
T Consensus 161 ~~l~~~~~~~~~ 172 (181)
T 3t5g_A 161 RRIILEAEKMDG 172 (181)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHHhcC
Confidence 999998865543
No 18
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=99.22 E-value=1.2e-10 Score=107.87 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=84.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ .+.+.+....+..+.......+.|++
T Consensus 51 ~~~~l~D~~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 112 (167)
T 1kao_A 51 SVLEILDTAGT-EQFASMRDLYIKNGQGFILVYSLVN-----------------QQSFQDIKPMRDQIIRVKRYEKVPVI 112 (167)
T ss_dssp EEEEEEECCCT-TCCHHHHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHTTTSCCCEE
T ss_pred EEEEEEECCCc-hhhHHHHHHHhccCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 6778889999999999999999985 23455556666666665445689999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.++.. + . .+.++.+||.++.+|+++|
T Consensus 113 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-~----~------~~~~~~~Sa~~~~gi~~l~ 157 (167)
T 1kao_A 113 LVGNKVDLESER----EVS--------------------SSEGRALAE-E----W------GCPFMETSAKSKTMVDELF 157 (167)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-H----H------TSCEEEECTTCHHHHHHHH
T ss_pred EEEECCcccccc----cCC--------------------HHHHHHHHH-H----h------CCCEEEecCCCCcCHHHHH
Confidence 999999986531 111 122222221 1 1 1237789999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 158 ~~l~~~~~ 165 (167)
T 1kao_A 158 AEIVRQMN 165 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998774
No 19
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=99.19 E-value=2e-10 Score=112.77 Aligned_cols=118 Identities=13% Similarity=0.066 Sum_probs=83.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....+..+.... -.+.|++
T Consensus 74 ~~l~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~~-~~~~pii 134 (200)
T 2o52_A 74 VKLQIWDTAGQ-ERFRSVTRSYYRGAAGALLVYDITSR-----------------ETYNSLAAWLTDARTLA-SPNIVVI 134 (200)
T ss_dssp EEEEEECCTTH-HHHSCCCHHHHTTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHT-CTTCEEE
T ss_pred eEEEEEcCCCc-HhHHHHHHHHhccCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 47899999999 67788899999999999999999852 22333334444444322 1478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.+|.. . ..+.++.|||.++.+|+++|
T Consensus 135 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~-----~------~~~~~~~~SA~~g~gi~~l~ 179 (200)
T 2o52_A 135 LCGNKKDLDPER----EVT--------------------FLEASRFAQ-----E------NELMFLETSALTGENVEEAF 179 (200)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEEECTTTCTTHHHHH
T ss_pred EEEECCCccccc----ccC--------------------HHHHHHHHH-----H------cCCEEEEEeCCCCCCHHHHH
Confidence 999999996531 111 223333221 1 23567889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+.....
T Consensus 180 ~~l~~~i~~~~~ 191 (200)
T 2o52_A 180 LKCARTILNKID 191 (200)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999998865543
No 20
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=99.17 E-value=3.3e-10 Score=106.14 Aligned_cols=119 Identities=20% Similarity=0.313 Sum_probs=92.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ..++.+....+..++.+....+.|++
T Consensus 51 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 112 (171)
T 1upt_A 51 LKFQVWDLGGL-TSIRPYWRCYYSNTDAVIYVVDSCD-----------------RDRIGISKSELVAMLEEEELRKAILV 112 (171)
T ss_dssp EEEEEEEECCC-GGGGGGGGGGCTTCSEEEEEEETTC-----------------CTTHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEECCCC-hhhhHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhchhhCCCEEE
Confidence 57999999999 7788899999999999999999885 34566777888888887767789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+. . .++..+.+ .+. ....+.+.++.|||.++.+|+++|
T Consensus 113 lv~nK~Dl~~~~------~--------------------~~~~~~~~-----~~~-~~~~~~~~~~~~Sa~~~~gi~~l~ 160 (171)
T 1upt_A 113 VFANKQDMEQAM------T--------------------SSEMANSL-----GLP-ALKDRKWQIFKTSATKGTGLDEAM 160 (171)
T ss_dssp EEEECTTSTTCC------C--------------------HHHHHHHH-----TGG-GCTTSCEEEEECCTTTCTTHHHHH
T ss_pred EEEECCCCcCCC------C--------------------HHHHHHHh-----Cch-hccCCceEEEECcCCCCcCHHHHH
Confidence 999999986530 0 12221211 111 122456788999999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 161 ~~l~~~i~~ 169 (171)
T 1upt_A 161 EWLVETLKS 169 (171)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999998864
No 21
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=99.13 E-value=5.3e-10 Score=107.82 Aligned_cols=125 Identities=18% Similarity=0.358 Sum_probs=92.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCC-----
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFK----- 720 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~----- 720 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++.+..+.
T Consensus 63 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~~~~ 124 (199)
T 4bas_A 63 VAFTVFDMGGA-KKFRGLWETYYDNIDAVIFVVDSSD-----------------HLRLCVVKSEIQAMLKHEDIRRELPG 124 (199)
T ss_dssp EEEEEEEECCS-GGGGGGGGGGCTTCSEEEEEEETTC-----------------GGGHHHHHHHHHHHHTSHHHHSBCTT
T ss_pred EEEEEEECCCC-HhHHHHHHHHHhcCCEEEEEEECCc-----------------HHHHHHHHHHHHHHHhChhhhhcccc
Confidence 68999999999 7889999999999999999999985 345666777788887764432
Q ss_pred --CCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC
Q 042025 721 --DTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 721 --~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt 798 (844)
+.|+||++||+|+..+. . .++..+.+... .+. ..+.+.++.|||.++
T Consensus 125 ~~~~piilv~NK~Dl~~~~------~--------------------~~~~~~~~~~~--~~~---~~~~~~~~~~Sa~~g 173 (199)
T 4bas_A 125 GGRVPFLFFANKMDAAGAK------T--------------------AAELVEILDLT--TLM---GDHPFVIFASNGLKG 173 (199)
T ss_dssp SCBCCEEEEEECTTSTTCC------C--------------------HHHHHHHHTHH--HHH---TTSCEEEEECBTTTT
T ss_pred cCCCCEEEEEECcCCCCCC------C--------------------HHHHHHHhcch--hhc---cCCeeEEEEeeCCCc
Confidence 78999999999987531 0 12222222211 111 135678999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhcc
Q 042025 799 VTVDEAFKYIREVLKWDDEKE 819 (844)
Q Consensus 799 e~I~evF~~V~e~Ik~~~~k~ 819 (844)
.+|+++|++|.+.+.....+.
T Consensus 174 ~gv~~l~~~l~~~~~~~~~~~ 194 (199)
T 4bas_A 174 TGVHEGFSWLQETASRQSGKA 194 (199)
T ss_dssp BTHHHHHHHHHHHHHHHC---
T ss_pred cCHHHHHHHHHHHHHHHhccc
Confidence 999999999999987665443
No 22
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=99.13 E-value=6.6e-10 Score=106.97 Aligned_cols=120 Identities=15% Similarity=0.248 Sum_probs=93.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|.+++.+++++|||+|+++ .+++.+....+..++......+.|++
T Consensus 66 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 127 (189)
T 2x77_A 66 ISFEVWDLGGQ-TGVRPYWRCYFSDTDAVIYVVDSTD-----------------RDRMGVAKHELYALLDEDELRKSLLL 127 (189)
T ss_dssp EEEEEEEECCS-SSSCCCCSSSSTTCCEEEEEEETTC-----------------CTTHHHHHHHHHHHHTCSTTTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhhcCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHhhhhcCCCeEE
Confidence 57999999999 7888999999999999999999985 34567778888999988777899999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+. . .++..+. ..+. ....+.+.++.|||.++.+|+++|
T Consensus 128 lv~nK~Dl~~~~------~--------------------~~~~~~~-----~~~~-~~~~~~~~~~~~Sa~~~~gi~~l~ 175 (189)
T 2x77_A 128 IFANKQDLPDAA------S--------------------EAEIAEQ-----LGVS-SIMNRTWTIVKSSSKTGDGLVEGM 175 (189)
T ss_dssp EEEECTTSTTCC------C--------------------HHHHHHH-----TTGG-GCCSSCEEEEECCTTTCTTHHHHH
T ss_pred EEEECCCCcCCC------C--------------------HHHHHHH-----hChh-hccCCceEEEEccCCCccCHHHHH
Confidence 999999986530 0 1121111 1111 122456788999999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+++.+.+...
T Consensus 176 ~~l~~~i~~~ 185 (189)
T 2x77_A 176 DWLVERLREQ 185 (189)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999988543
No 23
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.12 E-value=7.1e-10 Score=105.52 Aligned_cols=120 Identities=19% Similarity=0.304 Sum_probs=89.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++.+....+.|++
T Consensus 62 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 123 (183)
T 1moz_A 62 LKLNVWDLGGQ-TSIRPYWRCYYADTAAVIFVVDSTD-----------------KDRMSTASKELHLMLQEEELQDAALL 123 (183)
T ss_dssp EEEEEEEEC-----CCTTGGGTTTTEEEEEEEEETTC-----------------TTTHHHHHHHHHHHTTSSTTSSCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHcChhhCCCeEE
Confidence 57999999999 7788899999999999999999885 34567777888888887767789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+ .. .+++.++ ..+. ....+.+.++.|||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~------~~--------------------~~~i~~~-----~~~~-~~~~~~~~~~~~Sa~~~~gi~~l~ 171 (183)
T 1moz_A 124 VFANKQDQPGA------LS--------------------ASEVSKE-----LNLV-ELKDRSWSIVASSAIKGEGITEGL 171 (183)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHHH-----TTTT-TCCSSCEEEEEEBGGGTBTHHHHH
T ss_pred EEEECCCCCCC------CC--------------------HHHHHHH-----hCcc-cccCCceEEEEccCCCCcCHHHHH
Confidence 99999998652 10 1222221 2222 122456788999999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+|+.+.+..+
T Consensus 172 ~~l~~~~~~~ 181 (183)
T 1moz_A 172 DWLIDVIKEE 181 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999988654
No 24
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=99.11 E-value=1.2e-09 Score=105.58 Aligned_cols=118 Identities=14% Similarity=0.356 Sum_probs=91.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCC--CCCc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCF--KDTP 723 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f--~~tp 723 (844)
.++.+||++|+ ...+..|..++.+++++|||+|+++ .+.+.+....+..++....+ .+.|
T Consensus 67 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~~~p 128 (190)
T 2h57_A 67 LSFTVFDMSGQ-GRYRNLWEHYYKEGQAIIFVIDSSD-----------------RLRMVVAKEELDTLLNHPDIKHRRIP 128 (190)
T ss_dssp CEEEEEEECCS-TTTGGGGGGGGGGCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHSTTTTTSCCC
T ss_pred EEEEEEECCCC-HHHHHHHHHHHhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhChhhccCCCe
Confidence 57999999999 7888999999999999999999884 35567777888888888776 7899
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDE 803 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~e 803 (844)
++|++||+|+..+ .. .+++.++ ..+. ....+.+.++.|||.++.+|++
T Consensus 129 iilv~nK~Dl~~~------~~--------------------~~~~~~~-----~~~~-~~~~~~~~~~~~Sa~~~~gi~~ 176 (190)
T 2h57_A 129 ILFFANKMDLRDA------VT--------------------SVKVSQL-----LCLE-NIKDKPWHICASDAIKGEGLQE 176 (190)
T ss_dssp EEEEEECTTSTTC------CC--------------------HHHHHHH-----HTGG-GCCSSCEEEEECBTTTTBTHHH
T ss_pred EEEEEeCcCcccC------CC--------------------HHHHHHH-----hChh-hccCCceEEEEccCCCCcCHHH
Confidence 9999999999642 11 1222222 2222 1223567889999999999999
Q ss_pred HHHHHHHHHh
Q 042025 804 AFKYIREVLK 813 (844)
Q Consensus 804 vF~~V~e~Ik 813 (844)
+|++|.+.+.
T Consensus 177 l~~~l~~~i~ 186 (190)
T 2h57_A 177 GVDWLQDQIQ 186 (190)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHH
Confidence 9999998774
No 25
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.10 E-value=2.5e-10 Score=110.05 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=79.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+.. ..+..-+..+..+... ..+.|+|
T Consensus 56 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s~--------------~~~~~~~~~i~~~~~~--~~~~pii 118 (199)
T 2gf0_A 56 CTLQITDTTGS-HQFPAMQRLSISKGHAFILVFSVTSKQSL--------------EELGPIYKLIVQIKGS--VEDIPVM 118 (199)
T ss_dssp EEEEEEECCGG-GSCHHHHHHHHHHCSEEEEEEETTCHHHH--------------HTTHHHHHHHHHHHSC--GGGSCEE
T ss_pred EEEEEEeCCCh-HHhHHHHHHhhccCCEEEEEEECcCHHHH--------------HHHHHHHHHHHHHhcC--CCCCCEE
Confidence 46889999999 67788899999999999999999852211 1112222223333221 3568999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+. .. .+.+..+.. . . .+.++.+||.++.+|+++|
T Consensus 119 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~~-~----~------~~~~~~~Sa~~~~gi~~l~ 162 (199)
T 2gf0_A 119 LVGNKCDETQRE-----VD--------------------TREAQAVAQ-E----W------KCAFMETSAKMNYNVKELF 162 (199)
T ss_dssp EEEECTTCSSCS-----SC--------------------HHHHHHHHH-H----H------TCEEEECBTTTTBSHHHHH
T ss_pred EEEECccCCccc-----cC--------------------HHHHHHHHH-H----h------CCeEEEEecCCCCCHHHHH
Confidence 999999986421 10 122222211 1 1 2457889999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
++|.+.+...+
T Consensus 163 ~~l~~~~~~~~ 173 (199)
T 2gf0_A 163 QELLTLETRRN 173 (199)
T ss_dssp HHHHHHCSSSC
T ss_pred HHHHHHHhhhh
Confidence 99999876543
No 26
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=99.09 E-value=5.1e-10 Score=108.19 Aligned_cols=119 Identities=13% Similarity=0.241 Sum_probs=90.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ..++.+....+..++......+.|++
T Consensus 60 ~~l~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 121 (181)
T 1fzq_A 60 FKLNVWDIGGQ-RKIRPYWRSYFENTDILIYVIDSAD-----------------RKRFEETGQELTELLEEEKLSCVPVL 121 (181)
T ss_dssp EEEEEEECSSC-GGGHHHHHHHHTTCSEEEEEEETTC-----------------GGGHHHHHHHHHHHTTCGGGTTCCEE
T ss_pred EEEEEEECCCC-HHHHHHHHHHhCCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHhChhhcCCCEE
Confidence 57999999999 7788899999999999999999884 35677777788888887666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+. . .+++.++ ..+.. ...+.+.++.|||.++.||+++|
T Consensus 122 lv~NK~Dl~~~~------~--------------------~~~~~~~-----~~~~~-~~~~~~~~~~~Sa~~g~gi~~l~ 169 (181)
T 1fzq_A 122 IFANKQDLLTAA------P--------------------ASEIAEG-----LNLHT-IRDRVWQIQSCSALTGEGVQDGM 169 (181)
T ss_dssp EEEECTTSTTCC------C--------------------HHHHHHH-----TTGGG-CCSSCEEEEECCTTTCTTHHHHH
T ss_pred EEEECcCcccCC------C--------------------HHHHHHH-----hCchh-ccCCceEEEEccCCCCCCHHHHH
Confidence 999999986530 0 1222221 22221 23456888999999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+|+.+.+..
T Consensus 170 ~~l~~~~~~ 178 (181)
T 1fzq_A 170 NWVCKNVNA 178 (181)
T ss_dssp HHHHHTC--
T ss_pred HHHHHHHHh
Confidence 999887643
No 27
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=99.09 E-value=3.8e-10 Score=105.29 Aligned_cols=119 Identities=18% Similarity=0.308 Sum_probs=90.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ .+.+.+....+..++......+.|++
T Consensus 44 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 105 (164)
T 1r8s_A 44 ISFTVWDVGGQ-DKIRPLWRHYFQNTQGLIFVVDSND-----------------RERVNEAREELMRMLAEDELRDAVLL 105 (164)
T ss_dssp CEEEEEECCCC-GGGHHHHHHHTTTCSEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEEcCCC-hhhHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhchhhcCCeEE
Confidence 57999999999 7788889999999999999999985 34566777888888887777789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+ .. .++..+ .+ .+. ....+.+.++.|||.++.+|+++|
T Consensus 106 lv~nK~Dl~~~------~~--------------------~~~~~~----~~-~~~-~~~~~~~~~~~~Sa~~~~gi~~l~ 153 (164)
T 1r8s_A 106 VFANKQDLPNA------MN--------------------AAEITD----KL-GLH-SLRHRNWYIQATCATSGDGLYEGL 153 (164)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHH----HT-TGG-GCSSCCEEEEECBTTTTBTHHHHH
T ss_pred EEEECcCCcCC------CC--------------------HHHHHH----Hh-Ccc-cccCccEEEEEcccCCCcCHHHHH
Confidence 99999998642 00 112111 11 111 122456778999999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 154 ~~l~~~i~~ 162 (164)
T 1r8s_A 154 DWLSNQLRN 162 (164)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHhh
Confidence 999987753
No 28
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=99.08 E-value=9.3e-10 Score=105.46 Aligned_cols=120 Identities=13% Similarity=0.181 Sum_probs=93.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++.+....+.|++
T Consensus 62 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 123 (186)
T 1ksh_A 62 FKLNIWDVGGQ-KSLRSYWRNYFESTDGLIWVVDSAD-----------------RQRMQDCQRELQSLLVEERLAGATLL 123 (186)
T ss_dssp EEEEEEEECCS-HHHHTTGGGGCTTCSEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhcCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHhChhcCCCcEE
Confidence 58999999999 7788899999999999999999885 34577778888899888767789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+. . .+++.++ ..+.. ...+.+.++.|||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~~------~--------------------~~~~~~~-----~~~~~-~~~~~~~~~~~Sa~~~~gi~~l~ 171 (186)
T 1ksh_A 124 IFANKQDLPGAL------S--------------------CNAIQEA-----LELDS-IRSHHWRIQGCSAVTGEDLLPGI 171 (186)
T ss_dssp EEEECTTSTTCC------C--------------------HHHHHHH-----TTGGG-CCSSCEEEEECCTTTCTTHHHHH
T ss_pred EEEeCccCCCCC------C--------------------HHHHHHH-----hChhh-ccCCceEEEEeeCCCCCCHHHHH
Confidence 999999986530 0 1222221 22211 12456789999999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+++.+.+...
T Consensus 172 ~~l~~~i~~~ 181 (186)
T 1ksh_A 172 DWLLDDISSR 181 (186)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999887543
No 29
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=99.06 E-value=6.7e-10 Score=106.65 Aligned_cols=116 Identities=12% Similarity=0.268 Sum_probs=89.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++......+.|++
T Consensus 65 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 126 (181)
T 2h17_A 65 TRFLMWDIGGQ-ESLRSSWNTYYTNTEFVIVVVDSTD-----------------RERISVTREELYKMLAHEDLRKAGLL 126 (181)
T ss_dssp EEEEEEEESSS-GGGTCGGGGGGTTCCEEEEEEETTC-----------------TTTHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhChhhCCCeEE
Confidence 57999999999 7888999999999999999999885 34566777888888887656789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+ .. .+++.++ ..+.. ...+.+.++.|||.++.+|+++|
T Consensus 127 lv~NK~Dl~~~------~~--------------------~~~i~~~-----~~~~~-~~~~~~~~~~~Sa~~g~gi~~l~ 174 (181)
T 2h17_A 127 IFANKQDVKEC------MT--------------------VAEISQF-----LKLTS-IKDHQWHIQACCALTGEGLCQGL 174 (181)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHHH-----TTGGG-CCSSCEEEEECBTTTTBTHHHHH
T ss_pred EEEECCCcccC------CC--------------------HHHHHHH-----hCccc-ccCCceEEEEccCCCCcCHHHHH
Confidence 99999998642 10 1222222 22221 22456788999999999999999
Q ss_pred HHHHHH
Q 042025 806 KYIREV 811 (844)
Q Consensus 806 ~~V~e~ 811 (844)
++|.+.
T Consensus 175 ~~l~~~ 180 (181)
T 2h17_A 175 EWMMSR 180 (181)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 998753
No 30
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.04 E-value=1.1e-09 Score=105.40 Aligned_cols=120 Identities=13% Similarity=0.284 Sum_probs=88.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ .+.+.+....+..++.+....+.|++
T Consensus 60 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 121 (187)
T 1zj6_A 60 TRFLMWDIGGQ-ESLRSSWNTYYTNTEFVIVVVDSTD-----------------RERISVTREELYKMLAHEDLRKAGLL 121 (187)
T ss_dssp EEEEEEECCC-----CGGGHHHHTTCCEEEEEEETTC-----------------TTTHHHHHHHHHHHHTSGGGTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhcCCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHhchhhCCCeEE
Confidence 57999999999 7888999999999999999999885 34566777888888887666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+ .. .+++.+++ .+.. ...+.+.++.|||.++.+|+++|
T Consensus 122 lv~NK~Dl~~~------~~--------------------~~~i~~~~-----~~~~-~~~~~~~~~~~Sa~~g~gi~~l~ 169 (187)
T 1zj6_A 122 IFANKQDVKEC------MT--------------------VAEISQFL-----KLTS-IKDHQWHIQACCALTGEGLCQGL 169 (187)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHHHH-----TGGG-CCSSCEEEEECBTTTTBTHHHHH
T ss_pred EEEECCCCcCC------CC--------------------HHHHHHHh-----Chhh-hcCCCcEEEEccCCCCcCHHHHH
Confidence 99999998642 10 12222222 2211 22456788999999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+||.+.+...
T Consensus 170 ~~l~~~~~~~ 179 (187)
T 1zj6_A 170 EWMMSRLKIR 179 (187)
T ss_dssp HHHHHHHCC-
T ss_pred HHHHHHHHHH
Confidence 9999877443
No 31
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=99.02 E-value=1.2e-09 Score=106.63 Aligned_cols=119 Identities=16% Similarity=0.284 Sum_probs=87.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++......+.|++
T Consensus 73 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~iilv~D~~~-----------------~~s~~~~~~~l~~~~~~~~~~~~pii 134 (192)
T 2b6h_A 73 ICFTVWDVGGQ-DKIRPLWRHYFQNTQGLIFVVDSND-----------------RERVQESADELQKMLQEDELRDAVLL 134 (192)
T ss_dssp EEEEEEECC------CTTHHHHHHTCCEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHhcccccCCCeEE
Confidence 68999999999 7788899999999999999999985 34566777888888887777789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+ .. .+++.+ . ..+.. ...+.+.++.|||.++.+|+++|
T Consensus 135 lv~NK~Dl~~~------~~--------------------~~~i~~----~-~~~~~-~~~~~~~~~~~SA~~g~gi~~l~ 182 (192)
T 2b6h_A 135 VFANKQDMPNA------MP--------------------VSELTD----K-LGLQH-LRSRTWYVQATCATQGTGLYDGL 182 (192)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHH----H-TTGGG-CSSCCEEEEECBTTTTBTHHHHH
T ss_pred EEEECCCCCCC------CC--------------------HHHHHH----H-hCccc-ccCCceEEEECcCCCcCCHHHHH
Confidence 99999998542 00 122111 1 11111 12456788999999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 183 ~~l~~~i~~ 191 (192)
T 2b6h_A 183 DWLSHELSK 191 (192)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHhc
Confidence 999987753
No 32
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=99.02 E-value=1.7e-09 Score=106.30 Aligned_cols=122 Identities=18% Similarity=0.351 Sum_probs=86.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|| ...|..|.++|.+++++|||+|+++ ..++.+....+..++......+.|++
T Consensus 69 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 130 (198)
T 1f6b_A 69 MTFTTFDLGGH-IQARRVWKNYLPAINGIVFLVDCAD-----------------HERLLESKEELDSLMTDETIANVPIL 130 (198)
T ss_dssp EEEEEEEECC-----CCGGGGGGGGCSEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTSCEE
T ss_pred EEEEEEECCCc-HhhHHHHHHHHhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhCcccCCCcEE
Confidence 57999999999 7888999999999999999999884 45677778888888887666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHH-------hhhccCCCCcEEEEEEeecCC
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFK-------DLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl-------~L~~s~~~Rklyvh~T~AtDt 798 (844)
|++||+|+..+ .. .+++.+++..... .+. ....+.+.++.|||.++
T Consensus 131 lv~NK~Dl~~~------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~SA~~g 183 (198)
T 1f6b_A 131 ILGNKIDRPEA------IS--------------------EERLREMFGLYGQTTGKGSVSLK-ELNARPLEVFMCSVLKR 183 (198)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHHHHTCTTTCCCSSCCCTT-TCCSCCEEEEECBTTTT
T ss_pred EEEECCCcccc------CC--------------------HHHHHHHhCcccccccccccccc-cccCceEEEEEEECCCC
Confidence 99999998641 11 1222222210000 000 00125678899999999
Q ss_pred CCHHHHHHHHHHHH
Q 042025 799 VTVDEAFKYIREVL 812 (844)
Q Consensus 799 e~I~evF~~V~e~I 812 (844)
+||+++|+||.+.|
T Consensus 184 ~gv~~l~~~l~~~l 197 (198)
T 1f6b_A 184 QGYGEGFRWMAQYI 197 (198)
T ss_dssp BSHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhc
Confidence 99999999997653
No 33
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.02 E-value=1.2e-09 Score=122.69 Aligned_cols=124 Identities=15% Similarity=0.257 Sum_probs=94.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..+|+++++||||+|+++ ..++.+....+..++++..+.+.|+|
T Consensus 366 ~~~~l~Dt~G~-~~~~~~~~~~~~~ad~~i~V~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~i 427 (497)
T 3lvq_E 366 VKFNVWDVGGQ-DKIRPLWRHYYTGTQGLIFVVDCAD-----------------RDRIDEARQELHRIINDREMRDAIIL 427 (497)
T ss_dssp CEEEEEEECCC-GGGSGGGGGGGTTCCEEEEEEETTC-----------------GGGHHHHHHHHHHHHTSGGGTTCEEE
T ss_pred EEEEEEECCCc-HHHHHHHHHHhccCCEEEEEEECcc-----------------hhHHHHHHHHHHHHhhhhhcCCCcEE
Confidence 68999999999 7889999999999999999999985 45677888899999998888899999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+ .. .++..+ .+.+. ....+.+.++.|||++++||+++|
T Consensus 428 lv~NK~Dl~~~------~~--------------------~~~~~~-----~~~~~-~~~~~~~~~~~~SA~~g~gi~~l~ 475 (497)
T 3lvq_E 428 IFANKQDLPDA------MK--------------------PHEIQE-----KLGLT-RIRDRNWYVQPSCATSGDGLYEGL 475 (497)
T ss_dssp EEEECCSSSSC------CC--------------------HHHHHH-----HTTCT-TCCSSCEEEEECBTTTTBTHHHHH
T ss_pred EEEECCCCCcC------CC--------------------HHHHHH-----Hhchh-hhhcCCeEEEEEECCCCCCHHHHH
Confidence 99999998542 00 111111 12221 123467889999999999999999
Q ss_pred HHHHHHHhhhhhcc
Q 042025 806 KYIREVLKWDDEKE 819 (844)
Q Consensus 806 ~~V~e~Ik~~~~k~ 819 (844)
+||.+.+.....+.
T Consensus 476 ~~l~~~~~~~~~~~ 489 (497)
T 3lvq_E 476 TWLTSNYKSKLAAA 489 (497)
T ss_dssp HHHHHHCC------
T ss_pred HHHHHHHHhcCCCC
Confidence 99999886665544
No 34
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=99.02 E-value=7.1e-10 Score=106.08 Aligned_cols=122 Identities=20% Similarity=0.167 Sum_probs=83.7
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..++++||++|+ ...+..|..++.+++++|||+|+++. .. .+ ....+.+....+..+ .....+.|+
T Consensus 73 ~~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~D~~~~--~~--~~-------~~~s~~~l~~~l~~~--~~~~~~~pi 138 (198)
T 3t1o_A 73 KTRFHLYTVPGQ-VFYNASRKLILRGVDGIVFVADSAPN--RL--RA-------NAESMRNMRENLAEY--GLTLDDVPI 138 (198)
T ss_dssp EEEEEEEECCSC-CSCSHHHHHHTTTCCEEEEEEECCGG--GH--HH-------HHHHHHHHHHHHHHT--TCCTTSSCE
T ss_pred ceEEEEEeCCCh-HHHHHHHHHHHhcCCEEEEEEECCcc--hh--hH-------hHHHHHHHHHHHHhh--ccccCCCCE
Confidence 468999999999 78889999999999999999999841 11 00 012222222233332 234568999
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcE-EEEEEeecCCCCHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKL-FVWQARARDRVTVDE 803 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rkl-yvh~T~AtDte~I~e 803 (844)
||++||+|+..+ .. .+++.++. . ...+ .++.|||.++.+|++
T Consensus 139 ilv~NK~Dl~~~------~~--------------------~~~~~~~~-----~------~~~~~~~~~~Sa~~~~gv~~ 181 (198)
T 3t1o_A 139 VIQVNKRDLPDA------LP--------------------VEMVRAVV-----D------PEGKFPVLEAVATEGKGVFE 181 (198)
T ss_dssp EEEEECTTSTTC------CC--------------------HHHHHHHH-----C------TTCCSCEEECBGGGTBTHHH
T ss_pred EEEEEchhcccc------cC--------------------HHHHHHHH-----H------hcCCceEEEEecCCCcCHHH
Confidence 999999998652 11 23332221 1 1233 578899999999999
Q ss_pred HHHHHHHHHhhhhh
Q 042025 804 AFKYIREVLKWDDE 817 (844)
Q Consensus 804 vF~~V~e~Ik~~~~ 817 (844)
+|++|.+.+.....
T Consensus 182 l~~~l~~~i~~~~~ 195 (198)
T 3t1o_A 182 TLKEVSRLVLARVA 195 (198)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998876544
No 35
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=98.99 E-value=1.5e-09 Score=105.16 Aligned_cols=120 Identities=19% Similarity=0.332 Sum_probs=89.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++......+.|+|
T Consensus 67 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~ii~v~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 128 (188)
T 1zd9_A 67 VTIKLWDIGGQ-PRFRSMWERYCRGVSAIVYMVDAAD-----------------QEKIEASKNELHNLLDKPQLQGIPVL 128 (188)
T ss_dssp EEEEEEEECCS-HHHHTTHHHHHTTCSEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTCCEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHHccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhCcccCCCCEE
Confidence 67999999999 6778899999999999999999885 34566777888888887666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+ .. .++..+ . ..+.. ...+.+.++.|||.++.+|+++|
T Consensus 129 lv~NK~Dl~~~------~~--------------------~~~~~~----~-~~~~~-~~~~~~~~~~~SA~~g~gv~~l~ 176 (188)
T 1zd9_A 129 VLGNKRDLPGA------LD--------------------EKELIE----K-MNLSA-IQDREICCYSISCKEKDNIDITL 176 (188)
T ss_dssp EEEECTTSTTC------CC--------------------HHHHHH----H-TTGGG-CCSSCEEEEECCTTTCTTHHHHH
T ss_pred EEEECCCCccC------CC--------------------HHHHHH----H-hChhh-hccCCeeEEEEECCCCCCHHHHH
Confidence 99999998653 00 111111 1 11111 12345678899999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+...
T Consensus 177 ~~l~~~~~~~ 186 (188)
T 1zd9_A 177 QWLIQHSKSR 186 (188)
T ss_dssp HHHHHTCC--
T ss_pred HHHHHHHHhh
Confidence 9999877543
No 36
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=98.99 E-value=3.8e-09 Score=103.00 Aligned_cols=117 Identities=21% Similarity=0.325 Sum_probs=87.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|.++|.+++++|||+|+++ ..++.+....+..++......+.|++
T Consensus 67 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 128 (190)
T 1m2o_B 67 IKFTTFDLGGH-IQARRLWKDYFPEVNGIVFLVDAAD-----------------PERFDEARVELDALFNIAELKDVPFV 128 (190)
T ss_dssp EEEEEEECCCS-GGGTTSGGGGCTTCCEEEEEEETTC-----------------GGGHHHHHHHHHHHHTCGGGTTCCEE
T ss_pred EEEEEEECCCC-HHHHHHHHHHHhcCCEEEEEEECCC-----------------hHHHHHHHHHHHHHHcchhhcCCCEE
Confidence 57999999999 7888899999999999999999985 45677778888888887666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhc------cCCCCcEEEEEEeecCCC
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYA------SLTGRKLFVWQARARDRV 799 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~------s~~~Rklyvh~T~AtDte 799 (844)
|++||+|+..+ + . .+++.+++ .... -...+.+.++.|||.++.
T Consensus 129 lv~NK~Dl~~~-~-----~--------------------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Sa~~g~ 177 (190)
T 1m2o_B 129 ILGNKIDAPNA-V-----S--------------------EAELRSAL-----GLLNTTGSQRIEGQRPVEVFMCSVVMRN 177 (190)
T ss_dssp EEEECTTSTTC-C-----C--------------------HHHHHHHT-----TCSSCCC---CCSSCCEEEEECBTTTTB
T ss_pred EEEECCCCcCC-C-----C--------------------HHHHHHHh-----CCccccccccccccceEEEEEeECCcCC
Confidence 99999998641 1 0 11111111 1100 001356778899999999
Q ss_pred CHHHHHHHHHHH
Q 042025 800 TVDEAFKYIREV 811 (844)
Q Consensus 800 ~I~evF~~V~e~ 811 (844)
+|+++|+||.+.
T Consensus 178 gi~~l~~~l~~~ 189 (190)
T 1m2o_B 178 GYLEAFQWLSQY 189 (190)
T ss_dssp SHHHHHHHHHTT
T ss_pred CHHHHHHHHHhh
Confidence 999999998754
No 37
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=98.91 E-value=9e-09 Score=97.37 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=73.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+ .+.+....++.+..... .+.|++
T Consensus 60 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~~~-----------------s~~~~~~~~~~i~~~~~-~~~pii 120 (180)
T 2g6b_A 60 VKLQMWDTAGQ-ERFRSVTHAYYRDAHALLLLYDVTNKA-----------------SFDNIQAWLTEIHEYAQ-HDVALM 120 (180)
T ss_dssp EEEEEEECCCC---------CCGGGCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHHHSC-TTCEEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHccCCCEEEEEEECCCHH-----------------HHHHHHHHHHHHHHhCC-CCCcEE
Confidence 57999999999 788889999999999999999998521 12222233333333211 578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.++. ... .+.++.|||.++.+|+++|
T Consensus 121 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~~~gi~~l~ 165 (180)
T 2g6b_A 121 LLGNKVDSAHER----VVK--------------------REDGEKLA-----KEY------GLPFMETSAKTGLNVDLAF 165 (180)
T ss_dssp EEEECCSTTSCC----CSC--------------------HHHHHHHH-----HHH------TCCEEECCTTTCTTHHHHH
T ss_pred EEEECcccCccc----ccC--------------------HHHHHHHH-----HHc------CCeEEEEeCCCCCCHHHHH
Confidence 999999997531 010 12332222 111 1347889999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
+++.+.+....
T Consensus 166 ~~l~~~~~~~~ 176 (180)
T 2g6b_A 166 TAIAKELKRRS 176 (180)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHHh
Confidence 99999886544
No 38
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=98.89 E-value=1e-08 Score=98.16 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=85.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+.......+.|++
T Consensus 64 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~p~i 125 (195)
T 1x3s_A 64 AKLAIWDTAGQ-ERFRTLTPSYYRGAQGVILVYDVTR-----------------RDTFVKLDNWLNELETYCTRNDIVNM 125 (195)
T ss_dssp EEEEEEEECSS-GGGCCSHHHHHTTCCEEEEEEETTC-----------------HHHHHTHHHHHHHHTTCCSCSCCEEE
T ss_pred EEEEEEeCCCc-hhhhhhhHHHhccCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhcCcCCCcEE
Confidence 67999999999 7788899999999999999999985 22333444566666665445679999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+.... +. .+++.+|... ..+.++.|||.++.+|+++|
T Consensus 126 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~~~-----------~~~~~~~~Sa~~~~gi~~l~ 169 (195)
T 1x3s_A 126 LVGNKIDKENRE-----VD--------------------RNEGLKFARK-----------HSMLFIEASAKTCDGVQCAF 169 (195)
T ss_dssp EEEECTTSSSCC-----SC--------------------HHHHHHHHHH-----------TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECCcCcccc-----cC--------------------HHHHHHHHHH-----------cCCEEEEecCCCCCCHHHHH
Confidence 999999984311 10 2333332221 12457889999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+...
T Consensus 170 ~~l~~~~~~~ 179 (195)
T 1x3s_A 170 EELVEKIIQT 179 (195)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhh
Confidence 9999988643
No 39
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=98.89 E-value=6.4e-09 Score=98.91 Aligned_cols=121 Identities=14% Similarity=0.199 Sum_probs=89.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+..+....+.|++
T Consensus 70 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 131 (195)
T 3bc1_A 70 IHLQLWDTAGL-ERFRSLTTAFFRDAMGFLLLFDLTN-----------------EQSFLNVRNWISQLQMHAYSENPDIV 131 (195)
T ss_dssp EEEEEEEECCS-GGGHHHHHHTTTTCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHSSSSSCCEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHHcCCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 57899999999 7788889999999999999999985 23344455666777665555689999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+.+.+|.. .. .+.++.|||.++.+|+++|
T Consensus 132 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~~------~~~~~~~Sa~~~~~v~~l~ 176 (195)
T 3bc1_A 132 LCGNKSDLEDQR----AVK--------------------EEEARELAE-----KY------GIPYFETSAANGTNISHAI 176 (195)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHH-----HH------TCCEEECCTTTCTTHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHHH-----Hc------CCCEEEEECCCCCCHHHHH
Confidence 999999996531 110 223333221 11 1347889999999999999
Q ss_pred HHHHHHHhhhhhcc
Q 042025 806 KYIREVLKWDDEKE 819 (844)
Q Consensus 806 ~~V~e~Ik~~~~k~ 819 (844)
++|.+.+.....+.
T Consensus 177 ~~l~~~~~~~~~~~ 190 (195)
T 3bc1_A 177 EMLLDLIMKRMERS 190 (195)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhc
Confidence 99999887665443
No 40
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=98.87 E-value=1.9e-08 Score=97.40 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=84.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....++.+.... ..+.|++
T Consensus 70 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~~-----------------~s~~~~~~~l~~i~~~~-~~~~pii 130 (191)
T 2a5j_A 70 IKLQIWDTAGQ-ESFRSITRSYYRGAAGALLVYDITRR-----------------ETFNHLTSWLEDARQHS-SSNMVIM 130 (191)
T ss_dssp EEEEEECCTTG-GGTSCCCHHHHTTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEECCCc-hhhhhhHHHHhccCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57999999999 78888999999999999999999852 22333344444444422 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.+|... ..+.++.|||.++.+|+++|
T Consensus 131 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~~-----------~~~~~~~~Sa~~~~gi~~l~ 175 (191)
T 2a5j_A 131 LIGNKSDLESRR----DVK--------------------REEGEAFARE-----------HGLIFMETSAKTACNVEEAF 175 (191)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHHH-----------HTCEEEEECTTTCTTHHHHH
T ss_pred EEEECcccCCcc----ccC--------------------HHHHHHHHHH-----------cCCEEEEEeCCCCCCHHHHH
Confidence 999999996531 111 2233332211 12457889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 176 ~~l~~~i~~~~~~ 188 (191)
T 2a5j_A 176 INTAKEIYRKIQQ 188 (191)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999988765443
No 41
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=98.86 E-value=1e-08 Score=100.83 Aligned_cols=117 Identities=16% Similarity=0.152 Sum_probs=84.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++- ..+.+...+++.+.... -.+.|+|
T Consensus 78 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~iilv~D~~~~-----------------~s~~~~~~~~~~i~~~~-~~~~pii 138 (201)
T 2hup_A 78 VKLQIWDTAGQ-ERFRTITQSYYRSANGAILAYDITKR-----------------SSFLSVPHWIEDVRKYA-GSNIVQL 138 (201)
T ss_dssp EEEEEECCTTC-GGGHHHHHHHHTTCSEEEEEEETTBH-----------------HHHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEECCCc-HhHHHHHHHHHhhCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57999999999 77788899999999999999999852 23333444555554432 3578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcE-EEEEEeecCCCCHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKL-FVWQARARDRVTVDEA 804 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rkl-yvh~T~AtDte~I~ev 804 (844)
|++||+|+..++ .+. .+++.++. .. ..+ .++.|||.++.+|+++
T Consensus 139 lv~NK~Dl~~~~----~v~--------------------~~~~~~~~-----~~------~~~~~~~~~SA~~g~gi~~l 183 (201)
T 2hup_A 139 LIGNKSDLSELR----EVS--------------------LAEAQSLA-----EH------YDILCAIETSAKDSSNVEEA 183 (201)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHH-----HH------TTCSEEEECBTTTTBSHHHH
T ss_pred EEEECCcccccc----ccC--------------------HHHHHHHH-----HH------cCCCEEEEEeCCCCCCHHHH
Confidence 999999997641 111 23333322 11 123 6789999999999999
Q ss_pred HHHHHHHHhhhh
Q 042025 805 FKYIREVLKWDD 816 (844)
Q Consensus 805 F~~V~e~Ik~~~ 816 (844)
|++|.+.+....
T Consensus 184 ~~~l~~~i~~~~ 195 (201)
T 2hup_A 184 FLRVATELIMRH 195 (201)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999887544
No 42
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=98.86 E-value=2.8e-08 Score=93.57 Aligned_cols=119 Identities=18% Similarity=0.267 Sum_probs=84.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+... ..+.|+|
T Consensus 58 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~--~~~~p~i 117 (181)
T 3tw8_B 58 VKLQIWDTAGQ-ERFRTITSTYYRGTHGVIVVYDVTS-----------------AESFVNVKRWLHEINQN--CDDVCRI 117 (181)
T ss_dssp EEEEEEEETTG-GGCSSCCGGGGTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHH--CTTSEEE
T ss_pred EEEEEEcCCCc-hhhhhhHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHh--CCCCCEE
Confidence 57999999999 7888999999999999999999985 22333334444554442 3478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++. .. .+.+..+. ... .+.++.+||.++.+|+++|
T Consensus 118 lv~nK~Dl~~~~~----~~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~~~gi~~l~ 162 (181)
T 3tw8_B 118 LVGNKNDDPERKV----VE--------------------TEDAYKFA-----GQM------GIQLFETSAKENVNVEEMF 162 (181)
T ss_dssp EEEECTTCGGGCC----SC--------------------HHHHHHHH-----HHH------TCCEEECBTTTTBSHHHHH
T ss_pred EEEECCCCchhcc----cC--------------------HHHHHHHH-----HHc------CCeEEEEECCCCCCHHHHH
Confidence 9999999876420 10 12222222 111 1236789999999999999
Q ss_pred HHHHHHHhhhhhcc
Q 042025 806 KYIREVLKWDDEKE 819 (844)
Q Consensus 806 ~~V~e~Ik~~~~k~ 819 (844)
++|.+.+.....+.
T Consensus 163 ~~l~~~~~~~~~~~ 176 (181)
T 3tw8_B 163 NCITELVLRAKKDN 176 (181)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh
Confidence 99999887665544
No 43
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=98.86 E-value=1.6e-08 Score=95.44 Aligned_cols=120 Identities=11% Similarity=0.096 Sum_probs=80.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++-+. .+.+..-+..+...... ..+.| +
T Consensus 56 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s--------------~~~~~~~~~~i~~~~~~--~~~~~~i 118 (178)
T 2hxs_A 56 VTLQIWDIGGQ-TIGGKMLDKYIYGAQGVLLVYDITNYQS--------------FENLEDWYTVVKKVSEE--SETQPLV 118 (178)
T ss_dssp EEEEEEECTTC-CTTCTTHHHHHTTCSEEEEEEETTCHHH--------------HHTHHHHHHHHHHHHHH--HTCCCEE
T ss_pred EEEEEEECCCC-ccccchhhHHHhhCCEEEEEEECCCHHH--------------HHHHHHHHHHHHHHhcc--cCCCCeE
Confidence 57999999999 7888899999999999999999986221 11122222233332221 11345 8
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||+|+..++ .+. .+.+..|.. .. .+.++.|||.++.+|+++
T Consensus 119 ilv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~~------~~~~~~~Sa~~~~gi~~l 163 (178)
T 2hxs_A 119 ALVGNKIDLEHMR----TIK--------------------PEKHLRFCQ-----EN------GFSSHFVSAKTGDSVFLC 163 (178)
T ss_dssp EEEEECGGGGGGC----SSC--------------------HHHHHHHHH-----HH------TCEEEEECTTTCTTHHHH
T ss_pred EEEEEcccccccc----ccC--------------------HHHHHHHHH-----Hc------CCcEEEEeCCCCCCHHHH
Confidence 9999999997531 111 223333221 11 245789999999999999
Q ss_pred HHHHHHHHhhhhh
Q 042025 805 FKYIREVLKWDDE 817 (844)
Q Consensus 805 F~~V~e~Ik~~~~ 817 (844)
|++|.+.+.....
T Consensus 164 ~~~l~~~~~~~~~ 176 (178)
T 2hxs_A 164 FQKVAAEILGIKL 176 (178)
T ss_dssp HHHHHHHHTTCCC
T ss_pred HHHHHHHHHhhhh
Confidence 9999998865543
No 44
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=98.85 E-value=1e-08 Score=96.58 Aligned_cols=119 Identities=20% Similarity=0.298 Sum_probs=86.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..++......+.|++
T Consensus 57 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 118 (181)
T 2fn4_A 57 ARLDILDTAGQ-EEFGAMREQYMRAGHGFLLVFAIND-----------------RQSFNEVGKLFTQILRVKDRDDFPVV 118 (181)
T ss_dssp EEEEEEECCCT-TTTSCCHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHTSSCCCEE
T ss_pred EEEEEEECCCc-hhhHHHHHHHHhhCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 6788899999999999999999985 23444555666666554445678999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+..|. .. ..+.++.+||.++.+|+++|
T Consensus 119 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~-----~~------~~~~~~~~Sa~~~~gv~~l~ 163 (181)
T 2fn4_A 119 LVGNKADLESQR----QVP--------------------RSEASAFG-----AS------HHVAYFEASAKLRLNVDEAF 163 (181)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHH-----HH------TTCEEEECBTTTTBSHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHH-----HH------cCCeEEEecCCCCCCHHHHH
Confidence 999999997531 111 12222221 11 13467889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+.....
T Consensus 164 ~~l~~~~~~~~~ 175 (181)
T 2fn4_A 164 EQLVRAVRKYQE 175 (181)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhhc
Confidence 999998865544
No 45
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=98.84 E-value=2.8e-08 Score=95.93 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=85.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+.... -.+.|++
T Consensus 74 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~vi~v~D~~~-----------------~~s~~~~~~~l~~i~~~~-~~~~pii 134 (193)
T 2oil_A 74 VKAQIWDTAGL-ERYRAITSAYYRGAVGALLVFDLTK-----------------HQTYAVVERWLKELYDHA-EATIVVM 134 (193)
T ss_dssp EEEEEEEESCC-CTTCTTHHHHHTTCCEEEEEEETTC-----------------HHHHHTHHHHHHHHHTTS-CTTCEEE
T ss_pred EEEEEEeCCCc-hhhhhhhHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhc-CCCCeEE
Confidence 57899999999 7788899999999999999999985 223334445555555532 3578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+..|.. . ..+.++.|||+++.+|+++|
T Consensus 135 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~~~gi~~l~ 179 (193)
T 2oil_A 135 LVGNKSDLSQAR----EVP--------------------TEEARMFAE-----N------NGLLFLETSALDSTNVELAF 179 (193)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEEECTTTCTTHHHHH
T ss_pred EEEECCCccccc----ccC--------------------HHHHHHHHH-----H------cCCEEEEEeCCCCCCHHHHH
Confidence 999999997641 110 223333221 1 12467889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+..+..
T Consensus 180 ~~l~~~i~~~~~ 191 (193)
T 2oil_A 180 ETVLKEIFAKVS 191 (193)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999998876544
No 46
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=98.84 E-value=1.4e-08 Score=96.78 Aligned_cols=120 Identities=13% Similarity=0.180 Sum_probs=72.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+......+..+.... ..+.|++
T Consensus 57 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~-~~~~pii 117 (183)
T 2fu5_C 57 IKLQIWDTAGQ-ERFRTITTAYYRGAMGIMLVYDITN-----------------EKSFDNIRNWIRNIEEHA-SADVEKM 117 (183)
T ss_dssp EEEEEEEC----------CCTTTTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEcCCCC-hhhhhhHHHHHhcCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57899999999 7788899999999999999999985 223344444555554431 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.+|... . .+.++.|||.++.+|+++|
T Consensus 118 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~~-----~------~~~~~~~Sa~~~~~i~~l~ 162 (183)
T 2fu5_C 118 ILGNKCDVNDKR----QVS--------------------KERGEKLALD-----Y------GIKFMETSAKANINVENAF 162 (183)
T ss_dssp EEEEC--CCSCC----CSC--------------------HHHHHHHHHH-----H------TCEEEECCC---CCHHHHH
T ss_pred EEEECccCCccC----cCC--------------------HHHHHHHHHH-----c------CCeEEEEeCCCCCCHHHHH
Confidence 999999986531 010 2333333211 1 2457889999999999999
Q ss_pred HHHHHHHhhhhhcc
Q 042025 806 KYIREVLKWDDEKE 819 (844)
Q Consensus 806 ~~V~e~Ik~~~~k~ 819 (844)
++|.+.+.....+.
T Consensus 163 ~~l~~~i~~~~~~~ 176 (183)
T 2fu5_C 163 FTLARDIKAKMDKN 176 (183)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcc
Confidence 99999887655443
No 47
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=98.84 E-value=3.2e-08 Score=96.07 Aligned_cols=130 Identities=12% Similarity=0.127 Sum_probs=83.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHH-HHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSK-ELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl-~LFesI~n~p~f~~tpi 724 (844)
+.+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+.. .++..+... ..+.|+
T Consensus 68 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~--~~~~p~ 127 (201)
T 2q3h_A 68 VRLQLCDTAGQ-DEFDKLRPLCYTNTDIFLLCFSVVS-----------------PSSFQNVSEKWVPEIRCH--CPKAPI 127 (201)
T ss_dssp EEEEEEECCCS-TTCSSSGGGGGTTCSEEEEEEETTC-----------------HHHHHHHHHTHHHHHHHH--CSSSCE
T ss_pred EEEEEEECCCC-HHHHHHhHhhcCCCcEEEEEEECCC-----------------HHHHHHHHHHHHHHHHHh--CCCCCE
Confidence 57889999999 7788899999999999999999985 22333333 233333332 237899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||.|+..+.-....+..+ ... .-. .+.+..+. ... ..+.++.|||.++.+|+++
T Consensus 128 ilv~nK~Dl~~~~~~~~~~~~~------~~~---~v~---~~~~~~~~-----~~~-----~~~~~~~~Sa~~g~gi~~l 185 (201)
T 2q3h_A 128 ILVGTQSDLREDVKVLIELDKC------KEK---PVP---EEAAKLLA-----EEI-----KAASYIECSALTQKNLKEV 185 (201)
T ss_dssp EEEEECGGGGGCHHHHHHHHTT------TCC---CCC---HHHHHHHH-----HHH-----TCSEEEECCTTTCTTHHHH
T ss_pred EEEEECHhhhhchhhhhhhccc------ccc---cCC---HHHHHHHH-----Hhc-----CCcEEEEEecCCCCCHHHH
Confidence 9999999997642110001100 000 000 23332221 111 1235788999999999999
Q ss_pred HHHHHHHHhhhhh
Q 042025 805 FKYIREVLKWDDE 817 (844)
Q Consensus 805 F~~V~e~Ik~~~~ 817 (844)
|++|.+.+.....
T Consensus 186 ~~~l~~~~~~~~~ 198 (201)
T 2q3h_A 186 FDAAIVAGIQYSD 198 (201)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccc
Confidence 9999988865543
No 48
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=98.83 E-value=2.2e-08 Score=94.74 Aligned_cols=116 Identities=16% Similarity=0.215 Sum_probs=83.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+...+++.+.... ..+.|++
T Consensus 61 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~-~~~~p~i 121 (181)
T 2efe_B 61 VKFEIWDTAGQ-ERYHSLAPMYYRGAAAAIIVFDVTN-----------------QASFERAKKWVQELQAQG-NPNMVMA 121 (181)
T ss_dssp EEEEEEECCCS-GGGGGGTHHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEeCCCC-hhhhhhhHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57999999999 7888899999999999999999875 233444555566665542 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.+|.. . ..+.++.+||.++.+|+++|
T Consensus 122 ~v~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~g~gi~~l~ 166 (181)
T 2efe_B 122 LAGNKSDLLDAR----KVT--------------------AEDAQTYAQ-----E------NGLFFMETSAKTATNVKEIF 166 (181)
T ss_dssp EEEECTTCTTTC----CSC--------------------HHHHHHHHH-----H------TTCEEEECCSSSCTTHHHHH
T ss_pred EEEECCcccccc----cCC--------------------HHHHHHHHH-----H------cCCEEEEEECCCCCCHHHHH
Confidence 999999996531 110 233333221 1 13468899999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+...
T Consensus 167 ~~l~~~~~~~ 176 (181)
T 2efe_B 167 YEIARRLPRV 176 (181)
T ss_dssp HHHHHTCC--
T ss_pred HHHHHHHHhc
Confidence 9999877544
No 49
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.83 E-value=1.4e-08 Score=98.56 Aligned_cols=116 Identities=12% Similarity=0.129 Sum_probs=83.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ .. +..|..++.+++++|||+|+++ .+.+.+...+++.+.......+.|+|
T Consensus 76 ~~~~l~Dt~G~-~~-~~~~~~~~~~~d~iilv~D~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 136 (196)
T 2atv_A 76 VSMEILDTAGQ-ED-TIQREGHMRWGEGFVLVYDITD-----------------RGSFEEVLPLKNILDEIKKPKNVTLI 136 (196)
T ss_dssp EEEEEEECCCC-CC-CHHHHHHHHHCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHHTTSCCCEE
T ss_pred EEEEEEECCCC-Cc-ccchhhhhccCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 57999999999 45 7889999999999999999985 23344444445555543334578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCC-CHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRV-TVDEA 804 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte-~I~ev 804 (844)
|++||.|+..++ .+. .+++.++.. + + .+.++.|||.++. +|+++
T Consensus 137 lv~NK~Dl~~~~----~v~--------------------~~~~~~~~~-~---~-------~~~~~~~Sa~~g~~gi~~l 181 (196)
T 2atv_A 137 LVGNKADLDHSR----QVS--------------------TEEGEKLAT-E---L-------ACAFYECSACTGEGNITEI 181 (196)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-H---H-------TSEEEECCTTTCTTCHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHHH-H---h-------CCeEEEECCCcCCcCHHHH
Confidence 999999997641 111 233333221 1 1 2457889999999 99999
Q ss_pred HHHHHHHHhhh
Q 042025 805 FKYIREVLKWD 815 (844)
Q Consensus 805 F~~V~e~Ik~~ 815 (844)
|++|.+.+...
T Consensus 182 ~~~l~~~i~~~ 192 (196)
T 2atv_A 182 FYELCREVRRR 192 (196)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988654
No 50
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=98.82 E-value=2.4e-08 Score=93.88 Aligned_cols=115 Identities=14% Similarity=0.113 Sum_probs=79.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++-. .+.+....+..+.... -.+.|++
T Consensus 64 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~-----------------s~~~~~~~~~~~~~~~-~~~~pii 124 (179)
T 1z0f_A 64 IKLQIWDTAGQ-ERFRAVTRSYYRGAAGALMVYDITRRS-----------------TYNHLSSWLTDARNLT-NPNTVII 124 (179)
T ss_dssp EEEEEEECTTG-GGTCHHHHHHHHTCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEECCCC-hHhhhhHHHHhccCCEEEEEEeCcCHH-----------------HHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57999999999 778888999999999999999998521 1222223333333221 2368999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+++.+|... ..+.++.+||.++.+|+++|
T Consensus 125 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~~-----------~~~~~~~~Sa~~~~gi~~l~ 169 (179)
T 1z0f_A 125 LIGNKADLEAQR----DVT--------------------YEEAKQFAEE-----------NGLLFLEASAKTGENVEDAF 169 (179)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHHH-----------TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHHHH-----------cCCEEEEEeCCCCCCHHHHH
Confidence 999999996531 110 2333333211 12468899999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 170 ~~l~~~i~~ 178 (179)
T 1z0f_A 170 LEAAKKIYQ 178 (179)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhh
Confidence 999987753
No 51
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=98.81 E-value=1.7e-08 Score=108.52 Aligned_cols=119 Identities=19% Similarity=0.322 Sum_probs=88.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.++++||||+|+++ ...+.+....+..++......+.|+|
T Consensus 209 ~~l~i~Dt~G~-~~~~~~~~~~~~~ad~vilV~D~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~pii 270 (329)
T 3o47_A 209 ISFTVWDVGGQ-DKIRPLWRHYFQNTQGLIFVVDSND-----------------RERVNEAREELMRMLAEDELRDAVLL 270 (329)
T ss_dssp EEEEEEECC------CCSHHHHHTTEEEEEEEEETTC-----------------SSSHHHHHHHHHHHHTCGGGTTCEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHhccCCEEEEEEECCc-----------------hHHHHHHHHHHHHHHhhhccCCCeEE
Confidence 68999999999 7888899999999999999999985 34466777788888888777899999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+. + .++ +...+ .+. ....+.+.++.|||.++.+|+++|
T Consensus 271 lV~NK~Dl~~~~----------------------~----~~~----i~~~~-~~~-~~~~~~~~~~~vSAk~g~gi~el~ 318 (329)
T 3o47_A 271 VFANKQDLPNAM----------------------N----AAE----ITDKL-GLH-SLRHRNWYIQATCATSGDGLYEGL 318 (329)
T ss_dssp EEEECTTSTTCC----------------------C----HHH----HHHHH-TCT-TCCSSCEEEEECBTTTTBTHHHHH
T ss_pred EEEECccCCccc----------------------C----HHH----HHHHh-chh-hhhcCCCEEEEEECCCCcCHHHHH
Confidence 999999986421 0 122 22222 221 123467889999999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.|..
T Consensus 319 ~~l~~~l~~ 327 (329)
T 3o47_A 319 DWLSNQLRN 327 (329)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998754
No 52
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=98.81 E-value=2.2e-08 Score=96.96 Aligned_cols=120 Identities=14% Similarity=0.171 Sum_probs=81.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....|...+.. ...+.|+|
T Consensus 71 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~-~~~~~p~i 131 (194)
T 3reg_A 71 FILHLWDTAGQ-EEYDRLRPLSYADSDVVLLCFAVNN-----------------RTSFDNISTKWEPEIKH-YIDTAKTV 131 (194)
T ss_dssp EEEEEEEECCS-GGGTTTGGGGCTTCSEEEEEEETTC-----------------HHHHHHHHHTHHHHHHH-HCTTSEEE
T ss_pred EEEEEEECCCc-HHHHHHhHhhccCCcEEEEEEECCC-----------------HHHHHHHHHHHHHHHHH-hCCCCCEE
Confidence 57899999999 7888999999999999999999985 23333332333333332 23578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+.-. .. . .+++.++.. ... . ..++.|||.++.+|+++|
T Consensus 132 lv~nK~Dl~~~~~~--~~-----------------~---~~~~~~~~~-----~~~-~----~~~~~~Sa~~~~gi~~l~ 179 (194)
T 3reg_A 132 LVGLKVDLRKDGSD--DV-----------------T---KQEGDDLCQ-----KLG-C----VAYIEASSVAKIGLNEVF 179 (194)
T ss_dssp EEEECGGGCCTTTT--CC-----------------C---HHHHHHHHH-----HHT-C----SCEEECBTTTTBSHHHHH
T ss_pred EEEEChhhccCCCC--cc-----------------c---HHHHHHHHH-----hcC-C----CEEEEeecCCCCCHHHHH
Confidence 99999999753100 00 0 233333221 111 0 116789999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
+++.+.+....
T Consensus 180 ~~l~~~i~~~~ 190 (194)
T 3reg_A 180 EKSVDCIFSNK 190 (194)
T ss_dssp HHHHHHHHCSC
T ss_pred HHHHHHHHhcC
Confidence 99999886543
No 53
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=98.81 E-value=7.1e-08 Score=92.94 Aligned_cols=116 Identities=12% Similarity=0.192 Sum_probs=81.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.....++..+... ...+.|++
T Consensus 71 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~~-----------------~s~~~~~~~~~~i~~~-~~~~~pii 131 (189)
T 2gf9_A 71 IKLQIWDTAGQ-ERYRTITTAYYRGAMGFLLMYDIANQ-----------------ESFAAVQDWATQIKTY-SWDNAQVI 131 (189)
T ss_dssp EEEEEEECCSC-CSSCCSGGGGGTTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHH-SCTTCEEE
T ss_pred EEEEEEeCCCc-HHHhhhHHHhccCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHh-cCCCCCEE
Confidence 57999999999 78889999999999999999999852 1222233334444332 24578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.++. +++ .+.++.+||.++.+|+++|
T Consensus 132 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~-~~~----------~~~~~~~Sa~~g~gi~~l~ 176 (189)
T 2gf9_A 132 LVGNKCDLEDER----VVP--------------------AEDGRRLA-DDL----------GFEFFEASAKENINVKQVF 176 (189)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHH-HHH----------TCEEEECBTTTTBSHHHHH
T ss_pred EEEECccccccc----CCC--------------------HHHHHHHH-HHc----------CCeEEEEECCCCCCHHHHH
Confidence 999999997541 010 12332222 111 1357889999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+..+
T Consensus 177 ~~l~~~i~~~ 186 (189)
T 2gf9_A 177 ERLVDVICEK 186 (189)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988643
No 54
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=98.80 E-value=3.1e-08 Score=92.43 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=72.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|+|+|+++ ...+.+....+..+.......+.|++
T Consensus 49 ~~~~i~D~~g~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~i 110 (166)
T 3q72_A 49 ASLMVYDIWEQ-DGGRWLPGHCMAMGDAYVIVYSVTD-----------------KGSFEKASELRVQLRRARQTDDVPII 110 (166)
T ss_dssp EEEEEEECC----------------CCEEEEEEETTC-----------------HHHHHHHHHHHHHHHHCC---CCCEE
T ss_pred EEEEEEECCCC-ccchhhhhhhhhhCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 46889999999 7788899999999999999999985 34566667777888876666789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.. +... ..+.++.|||.++.+|+++|
T Consensus 111 lv~nK~Dl~~~~----~~~--------------------~~~~~~-----~~~~------~~~~~~~~Sa~~~~gi~~l~ 155 (166)
T 3q72_A 111 LVGNKSDLVRSR----EVS--------------------VDEGRA-----CAVV------FDCKFIETSAALHHNVQALF 155 (166)
T ss_dssp EEEECTTCCSSC----CSC--------------------HHHHHH-----HHHH------TTCEEEECBGGGTBSHHHHH
T ss_pred EEEecccccccc----ccC--------------------HHHHHH-----HHHH------hCCcEEEeccCCCCCHHHHH
Confidence 999999986531 010 122222 1111 12457889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 156 ~~l~~~~~~ 164 (166)
T 3q72_A 156 EGVVRQIRL 164 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988754
No 55
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=98.79 E-value=2.3e-08 Score=95.04 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=84.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+.......+.|++
T Consensus 52 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~i 113 (189)
T 4dsu_A 52 CLLDILDTAGQ-EEYSAMRDQYMRTGEGFLCVFAINN-----------------TKSFEDIHHYREQIKRVKDSEDVPMV 113 (189)
T ss_dssp EEEEEEECCCC----CTTHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHTTCSCCCEE
T ss_pred EEEEEEECCCc-HHHHHHHHHHHhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 56889999999 7888899999999999999999985 33445555666666665555689999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+.... . . .+.+..+. .. . .+.++.+||.++.+|+++|
T Consensus 114 ~v~nK~Dl~~~~-----~-----------------~---~~~~~~~~-~~----~------~~~~~~~Sa~~g~gi~~l~ 157 (189)
T 4dsu_A 114 LVGNKCDLPSRT-----V-----------------D---TKQAQDLA-RS----Y------GIPFIETSAKTRQGVDDAF 157 (189)
T ss_dssp EEEECTTSSSCS-----S-----------------C---HHHHHHHH-HH----H------TCCEEECCTTTCTTHHHHH
T ss_pred EEEECccCcccc-----c-----------------C---HHHHHHHH-HH----c------CCeEEEEeCCCCCCHHHHH
Confidence 999999986321 0 0 12222221 11 1 1347889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
+++.+.+.....+
T Consensus 158 ~~l~~~~~~~~~~ 170 (189)
T 4dsu_A 158 YTLVREIRKHKEK 170 (189)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999988665543
No 56
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=98.79 E-value=5.1e-08 Score=97.15 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=81.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+.... ..+.|+|
T Consensus 62 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~vilV~D~~~-----------------~~s~~~~~~~l~~i~~~~-~~~~pii 122 (223)
T 3cpj_B 62 IKAQIWDTAGQ-ERYRAITSAYYRGAVGALIVYDISK-----------------SSSYENCNHWLSELRENA-DDNVAVG 122 (223)
T ss_dssp EEEEEECCTTT-TTTTCCCGGGTTTCCEEEEEEC-CC-----------------HHHHHHHHHHHHHHHHHC-C--CEEE
T ss_pred EEEEEEECCCc-cchhhhHHHHhccCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHhC-CCCCeEE
Confidence 57999999999 7888899999999999999999885 223444444555554432 3478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++..|.. . ..+.++.|||.++.+|+++|
T Consensus 123 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~~~gi~~l~ 167 (223)
T 3cpj_B 123 LIGNKSDLAHLR----AVP--------------------TEESKTFAQ-----E------NQLLFTETSALNSENVDKAF 167 (223)
T ss_dssp EEECCGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEECCCC-CCCHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHHHHH-----H------cCCEEEEEeCCCCCCHHHHH
Confidence 999999997531 111 123333221 1 12467889999999999999
Q ss_pred HHHHHHHhhhhhcc
Q 042025 806 KYIREVLKWDDEKE 819 (844)
Q Consensus 806 ~~V~e~Ik~~~~k~ 819 (844)
++|.+.+.....+.
T Consensus 168 ~~l~~~i~~~~~~~ 181 (223)
T 3cpj_B 168 EELINTIYQKVSKH 181 (223)
T ss_dssp HHHHHHHTTCC---
T ss_pred HHHHHHHHHHhhhc
Confidence 99999887655443
No 57
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=98.79 E-value=5.2e-08 Score=91.08 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=73.0
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
...+.+||++|+ ...+..|..++.+++++|||+|+++-+. ...+..-+..+..... .+.|+
T Consensus 54 ~~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s--------------~~~~~~~~~~~~~~~~----~~~pi 114 (170)
T 1z08_A 54 RVNLAIWDTAGQ-ERFHALGPIYYRDSNGAILVYDITDEDS--------------FQKVKNWVKELRKMLG----NEICL 114 (170)
T ss_dssp EEEEEEEECCCC--------CCSSTTCSEEEEEEETTCHHH--------------HHHHHHHHHHHHHHHG----GGSEE
T ss_pred EEEEEEEECCCc-HhhhhhHHHHhccCCEEEEEEECcCHHH--------------HHHHHHHHHHHHHhcC----CCCeE
Confidence 357999999999 7788899999999999999999985211 1222222222333222 36899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||.|+..++ ... .+++.++.. . ..+.++.+||.++.+|+++
T Consensus 115 ilv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~~~gi~~l 159 (170)
T 1z08_A 115 CIVGNKIDLEKER----HVS--------------------IQEAESYAE-----S------VGAKHYHTSAKQNKGIEEL 159 (170)
T ss_dssp EEEEECGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEEEBTTTTBSHHHH
T ss_pred EEEEECccccccc----ccC--------------------HHHHHHHHH-----H------cCCeEEEecCCCCCCHHHH
Confidence 9999999997641 111 233333221 1 1245678999999999999
Q ss_pred HHHHHHHHh
Q 042025 805 FKYIREVLK 813 (844)
Q Consensus 805 F~~V~e~Ik 813 (844)
|++|.+.+.
T Consensus 160 ~~~l~~~~~ 168 (170)
T 1z08_A 160 FLDLCKRMI 168 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998774
No 58
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=98.79 E-value=3.8e-08 Score=91.55 Aligned_cols=113 Identities=15% Similarity=0.231 Sum_probs=81.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+.... ..+.|++
T Consensus 55 ~~~~~~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~-~~~~~ii 115 (170)
T 1r2q_A 55 VKFEIWDTAGQ-ERYHSLAPMYYRGAQAAIVVYDITN-----------------EESFARAKNWVKELQRQA-SPNIVIA 115 (170)
T ss_dssp EEEEEEEECCS-GGGGGGHHHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEeCCCc-HHhhhhhHHhccCCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 67999999999 7788899999999999999999885 233444445555555432 3478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ ... .+++.++.. . ..+.++.+||.++.+|+++|
T Consensus 116 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~-----~------~~~~~~~~Sa~~g~gi~~l~ 160 (170)
T 1r2q_A 116 LSGNKADLANKR----AVD--------------------FQEAQSYAD-----D------NSLLFMETSAKTSMNVNEIF 160 (170)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH-----H------TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccCcccc----ccC--------------------HHHHHHHHH-----H------cCCeEEEEeCCCCCCHHHHH
Confidence 999999996531 110 233333221 1 23567889999999999999
Q ss_pred HHHHHHH
Q 042025 806 KYIREVL 812 (844)
Q Consensus 806 ~~V~e~I 812 (844)
++|.+.+
T Consensus 161 ~~i~~~~ 167 (170)
T 1r2q_A 161 MAIAKKL 167 (170)
T ss_dssp HHHHHTS
T ss_pred HHHHHHH
Confidence 9998765
No 59
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=98.79 E-value=5.4e-08 Score=95.05 Aligned_cols=117 Identities=16% Similarity=0.150 Sum_probs=82.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++. ..+......++.+.... ..+.|++
T Consensus 57 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~vilv~d~~~~-----------------~s~~~~~~~~~~i~~~~-~~~~pii 117 (206)
T 2bcg_Y 57 VKLQIWDTAGQ-ERFRTITSSYYRGSHGIIIVYDVTDQ-----------------ESFNGVKMWLQEIDRYA-TSTVLKL 117 (206)
T ss_dssp EEEEEECCTTT-TTTTCCCGGGGTTCSEEEEEEETTCH-----------------HHHHHHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEeCCCh-HHHHHHHHHhccCCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57999999999 78888999999999999999999852 22333333444443322 2468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.+|. .. ..+.++.+||.++.+|+++|
T Consensus 118 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~-----~~------~~~~~~~~Sa~~g~gi~~l~ 162 (206)
T 2bcg_Y 118 LVGNKCDLKDKR----VVE--------------------YDVAKEFA-----DA------NKMPFLETSALDSTNVEDAF 162 (206)
T ss_dssp EEEECTTCTTTC----CSC--------------------HHHHHHHH-----HH------TTCCEEECCTTTCTTHHHHH
T ss_pred EEEECCCCcccc----ccC--------------------HHHHHHHH-----HH------cCCeEEEEeCCCCCCHHHHH
Confidence 999999997531 010 23333322 11 12347889999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
++|.+.+....
T Consensus 163 ~~l~~~i~~~~ 173 (206)
T 2bcg_Y 163 LTMARQIKESM 173 (206)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 99999886554
No 60
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=98.78 E-value=2.6e-08 Score=93.97 Aligned_cols=120 Identities=15% Similarity=0.156 Sum_probs=85.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+. ...+..-+..+..........+.|++
T Consensus 56 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~~~s--------------~~~~~~~~~~~~~~~~~~~~~~~p~i 120 (177)
T 1wms_A 56 VTMQIWDTAGQ-ERFRSLRTPFYRGSDCCLLTFSVDDSQS--------------FQNLSNWKKEFIYYADVKEPESFPFV 120 (177)
T ss_dssp EEEEEEECCCC-GGGHHHHGGGGTTCSEEEEEEETTCHHH--------------HHTHHHHHHHHHHHHTCSCTTTSCEE
T ss_pred EEEEEEeCCCc-hhhhhhHHHHHhcCCEEEEEEECcCHHH--------------HHHHHHHHHHHHHHccccccCCCcEE
Confidence 57999999999 7788899999999999999999985221 22333444445555554445678999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+...+ .. .+++.++... . ..+.++.|||.++.+|+++|
T Consensus 121 ~v~nK~Dl~~~~-----~~--------------------~~~~~~~~~~-----~-----~~~~~~~~Sa~~~~gi~~l~ 165 (177)
T 1wms_A 121 ILGNKIDISERQ-----VS--------------------TEEAQAWCRD-----N-----GDYPYFETSAKDATNVAAAF 165 (177)
T ss_dssp EEEECTTCSSCS-----SC--------------------HHHHHHHHHH-----T-----TCCCEEECCTTTCTTHHHHH
T ss_pred EEEECCcccccc-----cC--------------------HHHHHHHHHh-----c-----CCceEEEEeCCCCCCHHHHH
Confidence 999999986311 10 2333333221 1 23457889999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+++.+.+...
T Consensus 166 ~~l~~~~~~~ 175 (177)
T 1wms_A 166 EEAVRRVLAT 175 (177)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999888653
No 61
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.78 E-value=3.1e-08 Score=92.08 Aligned_cols=117 Identities=13% Similarity=0.209 Sum_probs=81.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+.... ..+.|++
T Consensus 52 ~~~~~~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~-~~~~pii 112 (170)
T 1ek0_A 52 VKFEIWDTAGQ-ERFASLAPXYYRNAQAALVVYDVTK-----------------PQSFIKARHWVKELHEQA-SKDIIIA 112 (170)
T ss_dssp EEEEEEEECCS-GGGGGGHHHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEECCCC-hhhhhhhhhhhccCcEEEEEEecCC-----------------hHHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57999999999 7788899999999999999999985 233444445555555432 3578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+.- ... . . .+.+.++. .. ..+.++.+||.++.+|+++|
T Consensus 113 lv~nK~Dl~~~~~----~~~------v--------~---~~~~~~~~-----~~------~~~~~~~~Sa~~~~gi~~l~ 160 (170)
T 1ek0_A 113 LVGNKIDXLQEGG----ERK------V--------A---REEGEKLA-----EE------KGLLFFETSAKTGENVNDVF 160 (170)
T ss_dssp EEEECGGGGGSSC----CCC------S--------C---HHHHHHHH-----HH------HTCEEEECCTTTCTTHHHHH
T ss_pred EEEECCCcccccc----ccC------C--------C---HHHHHHHH-----HH------cCCEEEEEeCCCCCCHHHHH
Confidence 9999999976410 000 0 0 12222221 11 12468899999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
+++.+.+.
T Consensus 161 ~~l~~~i~ 168 (170)
T 1ek0_A 161 LGIGEKIP 168 (170)
T ss_dssp HHHHTTSC
T ss_pred HHHHHHHh
Confidence 99987653
No 62
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=98.77 E-value=4.2e-08 Score=95.26 Aligned_cols=122 Identities=14% Similarity=0.190 Sum_probs=84.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++-+. ...+..-+..+..........+.|++
T Consensus 57 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s--------------~~~~~~~~~~~~~~~~~~~~~~~pii 121 (207)
T 1vg8_A 57 VTMQIWDTAGQ-ERFQSLGVAFYRGADCCVLVFDVTAPNT--------------FKTLDSWRDEFLIQASPRDPENFPFV 121 (207)
T ss_dssp EEEEEEEECSS-GGGSCSCCGGGTTCSEEEEEEETTCHHH--------------HHTHHHHHHHHHHHHCCSSGGGSCEE
T ss_pred EEEEEEeCCCc-HHHHHhHHHHHhCCcEEEEEEECCCHHH--------------HHHHHHHHHHHHHhcccccCCCCcEE
Confidence 67999999999 7788899999999999999999985211 22233333344444443334578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+.... .. .+.+..|. .. ...+.++.+||.++.+|+++|
T Consensus 122 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~-----~~-----~~~~~~~~~Sa~~g~gi~~l~ 166 (207)
T 1vg8_A 122 VLGNKIDLENRQ-----VA--------------------TKRAQAWC-----YS-----KNNIPYFETSAKEAINVEQAF 166 (207)
T ss_dssp EEEECTTSSCCC-----SC--------------------HHHHHHHH-----HH-----TTSCCEEECBTTTTBSHHHHH
T ss_pred EEEECCCCcccc-----cC--------------------HHHHHHHH-----Hh-----cCCceEEEEeCCCCCCHHHHH
Confidence 999999986310 00 22332222 11 123447899999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+.....
T Consensus 167 ~~l~~~~~~~~~ 178 (207)
T 1vg8_A 167 QTIARNALKQET 178 (207)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 999998876554
No 63
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=98.76 E-value=5.3e-08 Score=95.51 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=79.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHH-HHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSK-ELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl-~LFesI~n~p~f~~tpi 724 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+.. .++..+-.. ..+.|+
T Consensus 57 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~ilv~d~~~~-----------------~s~~~~~~~~~~~~~~~--~~~~pi 116 (212)
T 2j0v_A 57 VNLGLWDTAGQ-EDYSRLRPLSYRGADIFVLAFSLISK-----------------ASYENVLKKWMPELRRF--APNVPI 116 (212)
T ss_dssp EEEEEECCCCC-CCCCC--CGGGTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH--CTTCCE
T ss_pred EEEEEEECCCc-HHHHHHHHhhccCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHHh--CCCCCE
Confidence 68999999999 78888999999999999999999852 2233333 222222221 237899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||.|+..++-.... +.... . .+++.++.. + + + .+.++.|||.++.+|+++
T Consensus 117 ilv~nK~Dl~~~~~~~~~--------~~~~v-----~---~~~~~~~~~-~---~-----~-~~~~~~~Sa~~g~gi~~l 170 (212)
T 2j0v_A 117 VLVGTKLDLRDDKGYLAD--------HTNVI-----T---STQGEELRK-Q---I-----G-AAAYIECSSKTQQNVKAV 170 (212)
T ss_dssp EEEEECHHHHTCHHHHHT--------CSSCC-----C---HHHHHHHHH-H---H-----T-CSEEEECCTTTCTTHHHH
T ss_pred EEEEeCHHhhhCcccccc--------ccCCC-----C---HHHHHHHHH-H---c-----C-CceEEEccCCCCCCHHHH
Confidence 999999999764311000 00000 0 233333221 1 1 1 124688999999999999
Q ss_pred HHHHHHHHhhhhhc
Q 042025 805 FKYIREVLKWDDEK 818 (844)
Q Consensus 805 F~~V~e~Ik~~~~k 818 (844)
|++|.+.+.....+
T Consensus 171 ~~~l~~~~~~~~~~ 184 (212)
T 2j0v_A 171 FDTAIKVVLQPPRR 184 (212)
T ss_dssp HHHHHHHHHCC---
T ss_pred HHHHHHHHhhhhhh
Confidence 99999988655443
No 64
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=98.76 E-value=2.9e-08 Score=100.91 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=81.7
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
.+++++||++|| ...+..|..||.+++++|+|.|+++ .+.+......++.+..+. -.+.|+
T Consensus 61 ~v~l~iwDtaGq-e~~~~l~~~~~~~a~~~ilv~di~~-----------------~~Sf~~i~~~~~~i~~~~-~~~~pi 121 (216)
T 4dkx_A 61 TIRLQLWDTAGL-ERFRSLIPSYIRDSAAAVVVYDITN-----------------VNSFQQTTKWIDDVRTER-GSDVII 121 (216)
T ss_dssp EEEEEEECCSCT-TTCGGGHHHHHTTCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHH-TTSSEE
T ss_pred EEEEEEEECCCc-hhhhhHHHHHhccccEEEEEeecch-----------------hHHHHHHHHHHHHHHHhc-CCCCeE
Confidence 368999999999 7888899999999999999999985 233333344444444321 246899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||+.||.|+..++ .++ .+++.+|-. + . .+..+.|||.++.||+++
T Consensus 122 ilVgNK~Dl~~~r----~V~--------------------~~e~~~~a~-~----~------~~~~~e~SAktg~nV~e~ 166 (216)
T 4dkx_A 122 MLVGNKTDLADKR----QVS--------------------IEEGERKAK-E----L------NVMFIETSAKAGYNVKQL 166 (216)
T ss_dssp EEEEECTTCGGGC----CSC--------------------HHHHHHHHH-H----H------TCEEEEEBTTTTBSHHHH
T ss_pred EEEeeccchHhcC----ccc--------------------HHHHhhHHH-H----h------CCeeEEEeCCCCcCHHHH
Confidence 9999999987642 111 234443321 1 1 134678999999999999
Q ss_pred HHHHHHHHhhh
Q 042025 805 FKYIREVLKWD 815 (844)
Q Consensus 805 F~~V~e~Ik~~ 815 (844)
|.+|.+.|...
T Consensus 167 F~~i~~~i~~~ 177 (216)
T 4dkx_A 167 FRRVAAALPGM 177 (216)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHHhh
Confidence 99998887543
No 65
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=98.76 E-value=4e-08 Score=92.35 Aligned_cols=114 Identities=17% Similarity=0.216 Sum_probs=79.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....+..+.... -.+.|++
T Consensus 63 ~~~~~~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~i~~~~-~~~~pii 123 (179)
T 2y8e_A 63 VRLQLWDTAGQ-ERFRSLIPSYIRDSTVAVVVYDITNT-----------------NSFHQTSKWIDDVRTER-GSDVIIM 123 (179)
T ss_dssp EEEEEEEECCS-GGGGGGSHHHHHTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHH-TTSSEEE
T ss_pred EEEEEEECCCc-HHHHHHHHHHhcCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57999999999 77888999999999999999999852 12223333444443321 2468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++..+.. .. .+.++.+||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~~----~~-------~~~~~~~Sa~~~~~i~~l~ 168 (179)
T 2y8e_A 124 LVGNKTDLSDKR----QVS--------------------TEEGERKAK----EL-------NVMFIETSAKAGYNVKQLF 168 (179)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHHHHH----HH-------TCEEEEEBTTTTBSHHHHH
T ss_pred EEEECCcccccC----cCC--------------------HHHHHHHHH----Hc-------CCeEEEEeCCCCCCHHHHH
Confidence 999999997541 111 123333221 11 2457889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 169 ~~l~~~~~ 176 (179)
T 2y8e_A 169 RRVAAALP 176 (179)
T ss_dssp HHHHHTCC
T ss_pred HHHHHHHh
Confidence 99988764
No 66
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=98.76 E-value=8.5e-08 Score=92.59 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=80.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHH-HHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSK-ELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl-~LFesI~n~p~f~~tpi 724 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+.. .++..+... ..+.|+
T Consensus 66 ~~~~i~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~~--~~~~pi 125 (194)
T 2atx_A 66 YLLGLYDTAGQ-EDYDRLRPLSYPMTDVFLICFSVVNP-----------------ASFQNVKEEWVPELKEY--APNVPF 125 (194)
T ss_dssp EEEEEECCCCS-SSSTTTGGGGCTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH--STTCCE
T ss_pred EEEEEEECCCC-cchhHHHHHhcCCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHHh--CCCCCE
Confidence 67999999999 78888999999999999999999852 2233333 222333322 237899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||+|+..+.-....+. +.... .-. .+++.+|... + + .+.++.|||.++.+|+++
T Consensus 126 ilv~nK~Dl~~~~~~~~~~~------~~~~~---~v~---~~~~~~~~~~----~-----~-~~~~~~~Sa~~g~gi~~l 183 (194)
T 2atx_A 126 LLIGTQIDLRDDPKTLARLN------DMKEK---PIC---VEQGQKLAKE----I-----G-ACCYVECSALTQKGLKTV 183 (194)
T ss_dssp EEEEECTTSTTCHHHHHHHT------TTTCC---CCC---HHHHHHHHHH----H-----T-CSCEEECCTTTCTTHHHH
T ss_pred EEEEEChhhcccccchhhcc------cccCc---ccC---HHHHHHHHHH----c-----C-CcEEEEeeCCCCCCHHHH
Confidence 99999999976421100010 00000 000 2333332211 1 1 123678999999999999
Q ss_pred HHHHHHHHh
Q 042025 805 FKYIREVLK 813 (844)
Q Consensus 805 F~~V~e~Ik 813 (844)
|++|.+.+.
T Consensus 184 ~~~l~~~i~ 192 (194)
T 2atx_A 184 FDEAIIAIL 192 (194)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988765
No 67
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=98.76 E-value=5.6e-08 Score=93.34 Aligned_cols=119 Identities=15% Similarity=0.156 Sum_probs=81.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....++.+.... -.+.|+|
T Consensus 65 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~i~~~~-~~~~p~i 125 (196)
T 3tkl_A 65 IKLQIWDTAGQ-ERFRTITSSYYRGAHGIIVVYDVTDQ-----------------ESFNNVKQWLQEIDRYA-SENVNKL 125 (196)
T ss_dssp EEEEEEEECCS-GGGCTTHHHHHTTCSEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEECCCc-HhhhhhHHHHHhhCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57999999999 78888999999999999999999862 22222333333333321 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+.+.. |.... .+.++.|||.++.+|+++|
T Consensus 126 lv~nK~Dl~~~~----~~~--------------------~~~~~~-----~~~~~------~~~~~~~Sa~~g~gv~~l~ 170 (196)
T 3tkl_A 126 LVGNKCDLTTKK----VVD--------------------YTTAKE-----FADSL------GIPFLETSAKNATNVEQSF 170 (196)
T ss_dssp EEEECTTCTTTC----CSC--------------------HHHHHH-----HHHHT------TCCEEEECTTTCTTHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHH-----HHHHc------CCcEEEEeCCCCCCHHHHH
Confidence 999999986541 010 122222 11111 1347889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+......
T Consensus 171 ~~l~~~i~~~~~~ 183 (196)
T 3tkl_A 171 MTMAAEIKKRMGP 183 (196)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcc
Confidence 9999988765443
No 68
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=98.75 E-value=1.4e-08 Score=100.12 Aligned_cols=118 Identities=17% Similarity=0.221 Sum_probs=85.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....+..+.......+.|+|
T Consensus 84 ~~l~l~Dt~G~-~~~~~~~~~~~~~~d~iilV~D~~~-----------------~~s~~~~~~~l~~i~~~~~~~~~pii 145 (217)
T 2f7s_A 84 VHLQLWDTAGQ-ERFRSLTTAFFRDAMGFLLMFDLTS-----------------QQSFLNVRNWMSQLQANAYCENPDIV 145 (217)
T ss_dssp EEEEEEEEESH-HHHHHHHHHHHTTCCEEEEEEETTC-----------------HHHHHHHHHHHHTCCCCCTTTCCEEE
T ss_pred EEEEEEECCCc-HhHHhHHHHHhcCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhcCcCCCCEE
Confidence 57899999999 6778889999999999999999885 23344555556666555444789999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+.+.+|. ... .+.++.|||.++.+|+++|
T Consensus 146 lV~NK~Dl~~~~----~v~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~g~gi~~l~ 190 (217)
T 2f7s_A 146 LIGNKADLPDQR----EVN--------------------ERQARELA-----DKY------GIPYFETSAATGQNVEKAV 190 (217)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHH-----HHT------TCCEEEEBTTTTBTHHHHH
T ss_pred EEEECCcccccc----ccC--------------------HHHHHHHH-----HHC------CCcEEEEECCCCCCHHHHH
Confidence 999999996531 111 12332222 111 2347889999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
+||.+.+....
T Consensus 191 ~~l~~~i~~~~ 201 (217)
T 2f7s_A 191 ETLLDLIMKRM 201 (217)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999886543
No 69
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=98.74 E-value=2e-08 Score=97.23 Aligned_cols=120 Identities=16% Similarity=0.147 Sum_probs=78.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC--CCCCc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC--FKDTP 723 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~--f~~tp 723 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+...+++.+..... ..+.|
T Consensus 73 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~~~p 134 (208)
T 2yc2_C 73 VELFLLDTAGS-DLYKEQISQYWNGVYYAILVFDVSS-----------------MESFESCKAWFELLKSARPDRERPLR 134 (208)
T ss_dssp EEEEEEETTTT-HHHHHHHSTTCCCCCEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHCSCTTSCCE
T ss_pred EEEEEEECCCc-HHHHHHHHHHHhhCcEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhhcccccCCc
Confidence 47899999999 6778889999999999999999885 2344555566666665433 36789
Q ss_pred EEEEecccchhh-hhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC-CCCH
Q 042025 724 FVLILNKYDLFE-EKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD-RVTV 801 (844)
Q Consensus 724 iILfLNK~DLfe-eKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD-te~I 801 (844)
+||++||.|+.. ++ .++ .+++.+|.. . ..+.++.|||.+ +.+|
T Consensus 135 iilv~nK~Dl~~~~~----~v~--------------------~~~~~~~~~----~-------~~~~~~~~Sa~~~~~gi 179 (208)
T 2yc2_C 135 AVLVANKTDLPPQRH----QVR--------------------LDMAQDWAT----T-------NTLDFFDVSANPPGKDA 179 (208)
T ss_dssp EEEEEECC-----------CCC--------------------HHHHHHHHH----H-------TTCEEEECCC-------
T ss_pred EEEEEECcccchhhc----cCC--------------------HHHHHHHHH----H-------cCCEEEEeccCCCCcCH
Confidence 999999999976 21 111 233333321 1 125688999999 9999
Q ss_pred HHHHHHHHHHHhhhhhc
Q 042025 802 DEAFKYIREVLKWDDEK 818 (844)
Q Consensus 802 ~evF~~V~e~Ik~~~~k 818 (844)
+++|++|.+.+.....+
T Consensus 180 ~~l~~~i~~~~~~~~~~ 196 (208)
T 2yc2_C 180 DAPFLSIATTFYRNYED 196 (208)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999988665544
No 70
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=98.73 E-value=5.4e-08 Score=90.69 Aligned_cols=115 Identities=14% Similarity=0.191 Sum_probs=79.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++.+ .+.+....++.+.... -.+.|++
T Consensus 52 ~~~~l~D~~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~-----------------s~~~~~~~~~~i~~~~-~~~~pii 112 (170)
T 1g16_A 52 VKLQIWDTAGQ-ERFRTITTAYYRGAMGIILVYDITDER-----------------TFTNIKQWFKTVNEHA-NDEAQLL 112 (170)
T ss_dssp EEEEEECCTTG-GGTSCCCHHHHTTEEEEEEEEETTCHH-----------------HHHTHHHHHHHHHHHS-CTTCEEE
T ss_pred EEEEEEeCCCC-hhhhhhHHHHhccCCEEEEEEECCCHH-----------------HHHHHHHHHHHHHHhc-CCCCcEE
Confidence 57999999999 778889999999999999999998522 2222233344443321 2468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+...+ .. .+.+.++.. + . .+.++.+||.++.+|+++|
T Consensus 113 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~~-~----~------~~~~~~~Sa~~~~gv~~l~ 156 (170)
T 1g16_A 113 LVGNKSDMETRV-----VT--------------------ADQGEALAK-E----L------GIPFIESSAKNDDNVNEIF 156 (170)
T ss_dssp EEEECTTCTTCC-----SC--------------------HHHHHHHHH-H----H------TCCEEECBTTTTBSHHHHH
T ss_pred EEEECccCCcCc-----cC--------------------HHHHHHHHH-H----c------CCeEEEEECCCCCCHHHHH
Confidence 999999983211 10 223333221 1 1 1347889999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
+++.+.+...
T Consensus 157 ~~l~~~~~~~ 166 (170)
T 1g16_A 157 FTLAKLIQEK 166 (170)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999988643
No 71
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=98.73 E-value=3.1e-08 Score=94.40 Aligned_cols=116 Identities=13% Similarity=0.237 Sum_probs=82.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+......++.+.......+.|+|
T Consensus 66 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~i 127 (183)
T 3kkq_A 66 AILDVLDTAGQ-EEFSAMREQYMRTGDGFLIVYSVTD-----------------KASFEHVDRFHQLILRVKDRESFPMI 127 (183)
T ss_dssp EEEEEEECCSC-GGGCSSHHHHHHHCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHHTSSCCCEE
T ss_pred EEEEEEECCCc-hhhHHHHHHHHhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 46788999999 7788899999999999999999985 12233334445555443334578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec-CCCCHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR-DRVTVDEA 804 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At-Dte~I~ev 804 (844)
|++||.|+..++ ... .+++.++.. .. .+-++.|||. ++.+|+++
T Consensus 128 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~~-----~~------~~~~~~~Sa~~~~~~v~~l 172 (183)
T 3kkq_A 128 LVANKVDLMHLR----KVT--------------------RDQGKEMAT-----KY------NIPYIETSAKDPPLNVDKT 172 (183)
T ss_dssp EEEECTTCSTTC----CSC--------------------HHHHHHHHH-----HH------TCCEEEEBCSSSCBSHHHH
T ss_pred EEEECCCchhcc----CcC--------------------HHHHHHHHH-----Hh------CCeEEEeccCCCCCCHHHH
Confidence 999999986531 111 233333221 11 1337889999 99999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.|..
T Consensus 173 ~~~l~~~i~~ 182 (183)
T 3kkq_A 173 FHDLVRVIRQ 182 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 72
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=98.73 E-value=8.1e-08 Score=95.62 Aligned_cols=130 Identities=13% Similarity=0.060 Sum_probs=82.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+++..|-..+... ..+.|+|
T Consensus 75 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~i~~~-~~~~pii 135 (214)
T 3q3j_B 75 VELSLWDTSGS-PYYDNVRPLCYSDSDAVLLCFDISR-----------------PETVDSALKKWRTEILDY-CPSTRVL 135 (214)
T ss_dssp EEEEEEEECCS-GGGTTTGGGGCTTCSEEEEEEETTC-----------------THHHHHHHTHHHHHHHHH-CTTSEEE
T ss_pred EEEEEEECCCC-HhHHHHHHHHcCCCeEEEEEEECcC-----------------HHHHHHHHHHHHHHHHHh-CCCCCEE
Confidence 67999999999 7888899999999999999999985 223334333332222221 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcE-EEEEEeecCCCC-HHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKL-FVWQARARDRVT-VDE 803 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rkl-yvh~T~AtDte~-I~e 803 (844)
|++||.|+..+.-....+.. ... . .-. .+++..+.. .. .+ .++.|||.++.+ |++
T Consensus 136 lv~nK~Dl~~~~~~~~~~~~------~~~-~--~v~---~~~~~~~~~-----~~------~~~~~~e~SA~~g~g~v~~ 192 (214)
T 3q3j_B 136 LIGCKTDLRTDLSTLMELSH------QKQ-A--PIS---YEQGCAIAK-----QL------GAEIYLEGSAFTSEKSIHS 192 (214)
T ss_dssp EEEECGGGGGCHHHHHHHHH------TTC-C--CCC---HHHHHHHHH-----HH------TCSEEEECCTTTCHHHHHH
T ss_pred EEEEChhhccchhhhhhhcc------ccc-C--ccC---HHHHHHHHH-----Hc------CCCEEEEeccCCCcccHHH
Confidence 99999999764211100100 000 0 000 233333221 11 13 477899999998 999
Q ss_pred HHHHHHHHHhhhhh
Q 042025 804 AFKYIREVLKWDDE 817 (844)
Q Consensus 804 vF~~V~e~Ik~~~~ 817 (844)
+|+++.+.+.....
T Consensus 193 lf~~l~~~~~~~~~ 206 (214)
T 3q3j_B 193 IFRTASMLCLNKPS 206 (214)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHhccCc
Confidence 99999998865443
No 73
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=98.71 E-value=1.2e-07 Score=92.00 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=81.1
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..++.+||+.|+ ...+..|..++.+++++|||+|+++ ...+......+..+... ...+.|+
T Consensus 71 ~~~~~i~Dt~G~-~~~~~~~~~~~~~~d~iilV~d~~~-----------------~~s~~~~~~~~~~i~~~-~~~~~pi 131 (192)
T 2fg5_A 71 LHKFLIWDTAGQ-ERFHSLAPMYYRGSAAAVIVYDITK-----------------QDSFYTLKKWVKELKEH-GPENIVM 131 (192)
T ss_dssp EEEEEEEEECCS-GGGGGGTHHHHTTCSEEEEEEETTC-----------------THHHHHHHHHHHHHHHH-SCTTCEE
T ss_pred EEEEEEEcCCCc-hhhHhhhHHhhccCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHh-CCCCCcE
Confidence 368999999999 7788899999999999999999885 12233333444444332 1347899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||+|+..++ .+. .+++.++. . . ..+.++.|||+++.+|+++
T Consensus 132 iiv~NK~Dl~~~~----~v~--------------------~~~~~~~~-----~---~---~~~~~~~~Sa~~~~gi~~l 176 (192)
T 2fg5_A 132 AIAGNKCDLSDIR----EVP--------------------LKDAKEYA-----E---S---IGAIVVETSAKNAINIEEL 176 (192)
T ss_dssp EEEEECGGGGGGC----CSC--------------------HHHHHHHH-----H---T---TTCEEEECBTTTTBSHHHH
T ss_pred EEEEECccccccc----ccC--------------------HHHHHHHH-----H---H---cCCEEEEEeCCCCcCHHHH
Confidence 9999999996531 111 23333322 1 1 2356789999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.+..
T Consensus 177 ~~~l~~~i~~ 186 (192)
T 2fg5_A 177 FQGISRQIPP 186 (192)
T ss_dssp HHHHHHTCC-
T ss_pred HHHHHHHHHh
Confidence 9999887643
No 74
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=98.70 E-value=7.1e-08 Score=91.45 Aligned_cols=128 Identities=13% Similarity=0.163 Sum_probs=81.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHH-HHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSK-ELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl-~LFesI~n~p~f~~tpi 724 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+.. .++..+... ..+.|+
T Consensus 53 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~--~~~~pi 112 (186)
T 1mh1_A 53 VNLGLWDTAGQ-EDYDRLRPLSYPQTDVSLICFSLVS-----------------PASFENVRAKWYPEVRHH--CPNTPI 112 (186)
T ss_dssp EEEEEECCCCS-GGGTTTGGGGCTTCSEEEEEEETTC-----------------HHHHHHHHHTHHHHHHHH--STTSCE
T ss_pred EEEEEEECCCC-HhHHHHHHHhccCCcEEEEEEECCC-----------------hhhHHHHHHHHHHHHHHh--CCCCCE
Confidence 57889999999 7788899999999999999999985 22233333 223333322 237899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||.|+..+.-....+... .... -. .+++..+. .. . ..+.++.|||.++.+|+++
T Consensus 113 ilv~nK~Dl~~~~~~~~~~~~~----~~~~-----v~---~~~~~~~~-----~~---~--~~~~~~~~Sa~~g~gi~~l 170 (186)
T 1mh1_A 113 ILVGTKLDLRDDKDTIEKLKEK----KLTP-----IT---YPQGLAMA-----KE---I--GAVKYLECSALTQRGLKTV 170 (186)
T ss_dssp EEEEECHHHHTCHHHHHHHHHT----TCCC-----CC---HHHHHHHH-----HH---T--TCSEEEECCTTTCTTHHHH
T ss_pred EEEeEcccccccchhhhhhccc----cccc-----CC---HHHHHHHH-----Hh---c--CCcEEEEecCCCccCHHHH
Confidence 9999999997642110000000 0000 00 22332221 11 1 1235789999999999999
Q ss_pred HHHHHHHHhhh
Q 042025 805 FKYIREVLKWD 815 (844)
Q Consensus 805 F~~V~e~Ik~~ 815 (844)
|+++.+.+...
T Consensus 171 ~~~l~~~~~~~ 181 (186)
T 1mh1_A 171 FDEAIRAVLCP 181 (186)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHhcc
Confidence 99999988643
No 75
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=98.69 E-value=6.6e-08 Score=95.94 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=68.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHH-HHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKE-LFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~-LFesI~n~p~f~~tpi 724 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++. ..+.+... +++.+... ..+.|+
T Consensus 82 ~~l~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~~--~~~~pi 141 (214)
T 2j1l_A 82 VHLHIWDTAGQ-DDYDRLRPLFYPDASVLLLCFDVTSP-----------------NSFDNIFNRWYPEVNHF--CKKVPI 141 (214)
T ss_dssp EEEEEEEC----------------CEEEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH--CSSCCE
T ss_pred EEEEEEECCCc-hhhhHHHHHHhccCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHHh--CCCCCE
Confidence 57999999999 77888999999999999999999852 22333332 22222221 247899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||+|+..+.-....+... .... -. .+++.++. ... .-+.++.|||.++.+|+++
T Consensus 142 ilv~nK~Dl~~~~~~~~~~~~~----~~~~-----v~---~~~~~~~~-----~~~-----~~~~~~~~SA~~g~gi~el 199 (214)
T 2j1l_A 142 IVVGCKTDLRKDKSLVNKLRRN----GLEP-----VT---YHRGQEMA-----RSV-----GAVAYLECSARLHDNVHAV 199 (214)
T ss_dssp EEEEECGGGGSCHHHHHHHHHT----TCCC-----CC---HHHHHHHH-----HHT-----TCSEEEECBTTTTBSHHHH
T ss_pred EEEEEChhhhccchhhhhhccc----ccCc-----cc---HHHHHHHH-----Hhc-----CCCEEEEecCCCCCCHHHH
Confidence 9999999997643110000000 0000 00 23332222 111 1135788999999999999
Q ss_pred HHHHHHHHhhhhh
Q 042025 805 FKYIREVLKWDDE 817 (844)
Q Consensus 805 F~~V~e~Ik~~~~ 817 (844)
|++|.+.+.....
T Consensus 200 ~~~l~~~~~~~~~ 212 (214)
T 2j1l_A 200 FQEAAEVALSSRG 212 (214)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhc
Confidence 9999998875543
No 76
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=98.69 E-value=7.5e-08 Score=90.38 Aligned_cols=119 Identities=15% Similarity=0.151 Sum_probs=76.6
Q ss_pred ceEEEEEeCCCCCC--CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc
Q 042025 646 TKYQLIRVNAKGMN--EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP 723 (844)
Q Consensus 646 ~~~~liDVGGQ~rs--eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp 723 (844)
.++.+||++|+ .. .+..+..++.+++++|+|+|+++ ...+.....++..+.......+.|
T Consensus 52 ~~~~~~D~~g~-~~~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~l~~~~~~~~~p 113 (175)
T 2nzj_A 52 TTLVVVDTWEA-EKLDKSWSQESCLQGGSAYVIVYSIAD-----------------RGSFESASELRIQLRRTHQADHVP 113 (175)
T ss_dssp EEEEEECCC--------CHHHHHTTTSCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHCC----CC
T ss_pred EEEEEEecCCC-CccchhhhHHhhcccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhhccCCCC
Confidence 46889999999 44 33445568899999999999885 234445555666666654456799
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDE 803 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~e 803 (844)
+||++||+|+..++ .+. .+++..|. ... .+.++.|||.++.+|++
T Consensus 114 iilv~NK~Dl~~~~----~v~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~g~gi~~ 158 (175)
T 2nzj_A 114 IILVGNKADLARCR----EVS--------------------VEEGRACA-----VVF------DCKFIETSATLQHNVAE 158 (175)
T ss_dssp EEEEEECTTCTTTC----CSC--------------------HHHHHHHH-----HHH------TSEEEECBTTTTBSHHH
T ss_pred EEEEEEChhhcccc----ccC--------------------HHHHHHHH-----HHc------CCeEEEEecCCCCCHHH
Confidence 99999999996531 111 12222221 111 13578899999999999
Q ss_pred HHHHHHHHHhhhhh
Q 042025 804 AFKYIREVLKWDDE 817 (844)
Q Consensus 804 vF~~V~e~Ik~~~~ 817 (844)
+|++|.+.+.....
T Consensus 159 l~~~l~~~~~~~~~ 172 (175)
T 2nzj_A 159 LFEGVVRQLRLRRR 172 (175)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998865443
No 77
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=98.69 E-value=5.4e-08 Score=94.93 Aligned_cols=124 Identities=14% Similarity=0.198 Sum_probs=78.2
Q ss_pred ceEEEEEeCCCCCC-Ccccc--eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCC
Q 042025 646 TKYQLIRVNAKGMN-EGCKW--VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDT 722 (844)
Q Consensus 646 ~~~~liDVGGQ~rs-eR~KW--~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~t 722 (844)
..+++||++|+ .. .+..| ..+|.+++++|||+|+++- . .+.+..-...+..+.. ...+.
T Consensus 69 ~~l~i~Dt~G~-~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---~------------~~~~~~~~~~l~~~~~--~~~~~ 130 (196)
T 3llu_A 69 VNFQIWDFPGQ-MDFFDPTFDYEMIFRGTGALIYVIDAQDD---Y------------MEALTRLHITVSKAYK--VNPDM 130 (196)
T ss_dssp CCEEEEECCSS-CCTTCTTCCHHHHHHTCSEEEEEEETTSC---C------------HHHHHHHHHHHHHHHH--HCTTC
T ss_pred eEEEEEECCCC-HHHHhhhhhcccccccCCEEEEEEECCCc---h------------HHHHHHHHHHHHHHHh--cCCCC
Confidence 57999999999 55 45567 7899999999999998851 0 1222222233333322 23478
Q ss_pred cEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHH
Q 042025 723 PFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVD 802 (844)
Q Consensus 723 piILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ 802 (844)
|++|++||.|+..+.-. +.. ...+.......|.... .....+.++.|||.+ .+|+
T Consensus 131 piilv~nK~Dl~~~~~~---~~~-------------------~~~v~~~~~~~~~~~~--~~~~~~~~~e~Sa~~-~~v~ 185 (196)
T 3llu_A 131 NFEVFIHKVDGLSDDHK---IET-------------------QRDIHQRANDDLADAG--LEKLHLSFYLTSIYD-HSIF 185 (196)
T ss_dssp EEEEEEECGGGSCHHHH---HHH-------------------HHHHHHHHHHHHHHTT--CTTSCEEEEEECTTS-THHH
T ss_pred cEEEEEeccccCchhhh---hHH-------------------HhHHHHHHHHHHHHhh--hhcCCcceEEEEech-hhHH
Confidence 99999999999764211 000 0111111222232221 113457788999999 9999
Q ss_pred HHHHHHHHHH
Q 042025 803 EAFKYIREVL 812 (844)
Q Consensus 803 evF~~V~e~I 812 (844)
++|.++.+.|
T Consensus 186 ~~f~~l~~~l 195 (196)
T 3llu_A 186 EAFSKVVQKL 195 (196)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 78
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=98.69 E-value=5.9e-08 Score=93.19 Aligned_cols=119 Identities=17% Similarity=0.169 Sum_probs=71.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++- ..+.+...+++.+.......+.|++
T Consensus 69 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~i~~~~~~~~~p~i 130 (190)
T 3con_A 69 CLLDILDTAGQ-EEYSAMRDQYMRTGEGFLCVFAINNS-----------------KSFADINLYREQIKRVKDSDDVPMV 130 (190)
T ss_dssp EEEEEEECCC------------CTTCSEEEEEEETTCH-----------------HHHHHHHHHHHHHHHHHTCSCCCEE
T ss_pred EEEEEEECCCh-HHHHHHHHHhhCcCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 56899999999 67788899999999999999999852 2233333333333332223468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... .. .+++.++.. + . .+.++.|||.++.+++++|
T Consensus 131 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~~-~----~------~~~~~~~Sa~~~~gi~~l~ 174 (190)
T 3con_A 131 LVGNKCDLPTRT-----VD--------------------TKQAHELAK-S----Y------GIPFIETSAKTRQGVEDAF 174 (190)
T ss_dssp EEEECTTCSCCC-----SC--------------------HHHHHHHHH-H----H------TCCEEECCTTTCTTHHHHH
T ss_pred EEEECCcCCccc-----CC--------------------HHHHHHHHH-H----c------CCeEEEEeCCCCCCHHHHH
Confidence 999999986421 10 233333221 1 1 1347889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 175 ~~l~~~~~~~~~~ 187 (190)
T 3con_A 175 YTLVREIRQYRMK 187 (190)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHh
Confidence 9999988665443
No 79
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=98.68 E-value=1.1e-07 Score=90.68 Aligned_cols=113 Identities=12% Similarity=0.187 Sum_probs=81.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...+..|..++.+++++|||+|+++ ...+.+...++..+.... +.|++
T Consensus 93 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~D~~~-----------------~~s~~~~~~~~~~i~~~~---~~pii 151 (208)
T 3clv_A 93 IKFDIWDTAGQ-ERYASIVPLYYRGATCAIVVFDISN-----------------SNTLDRAKTWVNQLKISS---NYIII 151 (208)
T ss_dssp EEEEEEECTTG-GGCTTTHHHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHS---CCEEE
T ss_pred eEEEEEECCCc-HHHHHHHHHHhcCCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHhhC---CCcEE
Confidence 67999999999 7778889999999999999999885 122334445555555432 38999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+| ..++ ... .+++.+|+.. ..+.++.+||.++.+|+++|
T Consensus 152 lv~NK~D-~~~~----~~~--------------------~~~~~~~~~~-----------~~~~~~~~Sa~~~~~i~~l~ 195 (208)
T 3clv_A 152 LVANKID-KNKF----QVD--------------------ILEVQKYAQD-----------NNLLFIQTSAKTGTNIKNIF 195 (208)
T ss_dssp EEEECTT-CC-C----CSC--------------------HHHHHHHHHH-----------TTCEEEEECTTTCTTHHHHH
T ss_pred EEEECCC-cccc----cCC--------------------HHHHHHHHHH-----------cCCcEEEEecCCCCCHHHHH
Confidence 9999999 3210 010 2344443321 13468889999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+..+
T Consensus 196 ~~l~~~~~~~ 205 (208)
T 3clv_A 196 YMLAEEIYKN 205 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999888654
No 80
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=98.68 E-value=7.3e-08 Score=90.18 Aligned_cols=116 Identities=12% Similarity=0.093 Sum_probs=78.9
Q ss_pred ceEEEEEeCCCCCCCcc-cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGC-KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~-KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..+.+||++|+ ...+. .|..++.+++++|+|+|+++ ...+.+....+..+..+....+.|+
T Consensus 51 ~~~~i~D~~g~-~~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~~~~~p~ 112 (169)
T 3q85_A 51 VTLIVYDIWEQ-GDAGGWLQDHCLQTGDAFLIVFSVTD-----------------RRSFSKVPETLLRLRAGRPHHDLPV 112 (169)
T ss_dssp EEEEEECCCCC---------CHHHHHCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHSTTSCCCE
T ss_pred EEEEEEECCCc-cccchhhhhhhhccCCEEEEEEECCC-----------------hHHHHHHHHHHHHHHhcccCCCCCE
Confidence 46889999999 45544 78888999999999999985 2334445566666666655568999
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||.|+..++ ... .+.+.++. .. ..+.++.|||.++.+|+++
T Consensus 113 ilv~nK~Dl~~~~----~~~--------------------~~~~~~~~-----~~------~~~~~~~~Sa~~~~~v~~l 157 (169)
T 3q85_A 113 ILVGNKSDLARSR----EVS--------------------LEEGRHLA-----GT------LSCKHIETSAALHHNTREL 157 (169)
T ss_dssp EEEEECTTCGGGC----CSC--------------------HHHHHHHH-----HH------TTCEEEECBTTTTBSHHHH
T ss_pred EEEeeCcchhhcc----cCC--------------------HHHHHHHH-----HH------cCCcEEEecCccCCCHHHH
Confidence 9999999987531 111 22332221 11 1245788999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|+++.+.+..
T Consensus 158 ~~~l~~~i~~ 167 (169)
T 3q85_A 158 FEGAVRQIRL 167 (169)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 81
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=98.67 E-value=6.9e-08 Score=93.04 Aligned_cols=115 Identities=20% Similarity=0.253 Sum_probs=77.6
Q ss_pred ceEEEEEeCCCCCCCc-ccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEG-CKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR-~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
.++++||++|+ ...+ ..|..++.+++++|||+|+++. ..+......++.+...-...+.|+
T Consensus 69 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~d~iilv~D~~~~-----------------~s~~~~~~~~~~i~~~~~~~~~pi 130 (189)
T 1z06_A 69 IKIQLWDTAGQ-ERFRKSMVQHYYRNVHAVVFVYDMTNM-----------------ASFHSLPAWIEECKQHLLANDIPR 130 (189)
T ss_dssp EEEEEEECCCS-HHHHTTTHHHHHTTCCEEEEEEETTCH-----------------HHHHTHHHHHHHHHHHCCCSCCCE
T ss_pred EEEEEEECCCc-hhhhhhhhHHHhcCCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHHhcCCCCCCE
Confidence 57999999999 5666 7899999999999999999852 222333344555555433457899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC---CCH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR---VTV 801 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt---e~I 801 (844)
||++||+|+..++ .+. .+.+.+|. .. ..+.++.|||.++ ++|
T Consensus 131 ilv~nK~Dl~~~~----~v~--------------------~~~~~~~~-----~~------~~~~~~~~Sa~~~~~~~~i 175 (189)
T 1z06_A 131 ILVGNKCDLRSAI----QVP--------------------TDLAQKFA-----DT------HSMPLFETSAKNPNDNDHV 175 (189)
T ss_dssp EEEEECTTCGGGC----CSC--------------------HHHHHHHH-----HH------TTCCEEECCSSSGGGGSCH
T ss_pred EEEEECccccccc----eeC--------------------HHHHHHHH-----HH------cCCEEEEEeCCcCCcccCH
Confidence 9999999996531 111 12222221 11 1234788999999 999
Q ss_pred HHHHHHHHHHHh
Q 042025 802 DEAFKYIREVLK 813 (844)
Q Consensus 802 ~evF~~V~e~Ik 813 (844)
+++|++|.+.|.
T Consensus 176 ~~l~~~l~~~i~ 187 (189)
T 1z06_A 176 EAIFMTLAHKLK 187 (189)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHHHHh
Confidence 999999987664
No 82
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=98.67 E-value=6.7e-08 Score=93.93 Aligned_cols=116 Identities=15% Similarity=0.219 Sum_probs=79.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+ .+.+....++. +......+.|++
T Consensus 75 ~~l~l~Dt~G~-~~~~~~~~~~~~~~d~iilV~D~~~~~-----------------s~~~~~~~~~~-i~~~~~~~~pii 135 (192)
T 2il1_A 75 IRLQIWDTAGQ-ERFNSITSAYYRSAKGIILVYDITKKE-----------------TFDDLPKWMKM-IDKYASEDAELL 135 (192)
T ss_dssp EEEEEEEECCS-GGGHHHHHHHHHHCSEEEEEEETTCHH-----------------HHHTHHHHHHH-HHHHSCTTCEEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHhcCCCEEEEEEECcCHH-----------------HHHHHHHHHHH-HHHhcCCCCcEE
Confidence 57999999999 677888999999999999999998622 22222222222 222223478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ .+. .+++.+ |... . ..+.++.|||.++.+|+++|
T Consensus 136 lV~NK~Dl~~~~----~v~--------------------~~~~~~-----~~~~---~--~~~~~~~~SA~~g~gi~~l~ 181 (192)
T 2il1_A 136 LVGNKLDCETDR----EIT--------------------RQQGEK-----FAQQ---I--TGMRFCEASAKDNFNVDEIF 181 (192)
T ss_dssp EEEECGGGGGGC----CSC--------------------HHHHHH-----HHHT---S--TTCEEEECBTTTTBSHHHHH
T ss_pred EEEECccccccc----ccC--------------------HHHHHH-----HHHh---c--CCCeEEEEeCCCCCCHHHHH
Confidence 999999986531 111 122222 1111 1 23567889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 182 ~~l~~~i~~ 190 (192)
T 2il1_A 182 LKLVDDILK 190 (192)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988754
No 83
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.67 E-value=5.1e-08 Score=94.32 Aligned_cols=117 Identities=12% Similarity=0.194 Sum_probs=81.6
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
...+++||++|+ ...+..|..++.+++++|||+|+++- ..+.....+++.+.. ....+.|+
T Consensus 71 ~~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~i~~-~~~~~~pi 131 (191)
T 3dz8_A 71 RVKLQIWDTAGQ-ERYRTITTAYYRGAMGFILMYDITNE-----------------ESFNAVQDWATQIKT-YSWDNAQV 131 (191)
T ss_dssp TEEEEEECHHHH-HHCHHHHHHHHTTCCEEEEEEETTCH-----------------HHHHTHHHHHHHHHH-HSCTTCEE
T ss_pred EEEEEEEeCCCh-HHHHHHHHHHHccCCEEEEEEECcCH-----------------HHHHHHHHHHHHHHH-hcCCCCCE
Confidence 368999999999 77888999999999999999999851 222222333333333 22457899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||.|+..++. .. .+.+..+. ... .+.++.|||.++.+|+++
T Consensus 132 ilv~nK~Dl~~~~~----~~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~~~gi~~l 176 (191)
T 3dz8_A 132 ILVGNKCDMEEERV----VP--------------------TEKGQLLA-----EQL------GFDFFEASAKENISVRQA 176 (191)
T ss_dssp EEEEECTTCGGGCC----SC--------------------HHHHHHHH-----HHH------TCEEEECBTTTTBSHHHH
T ss_pred EEEEECCCCccccc----cC--------------------HHHHHHHH-----HHc------CCeEEEEECCCCCCHHHH
Confidence 99999999966421 10 12222221 111 235788999999999999
Q ss_pred HHHHHHHHhhh
Q 042025 805 FKYIREVLKWD 815 (844)
Q Consensus 805 F~~V~e~Ik~~ 815 (844)
|++|.+.+...
T Consensus 177 ~~~l~~~i~~~ 187 (191)
T 3dz8_A 177 FERLVDAICDK 187 (191)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988654
No 84
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=98.67 E-value=9.5e-08 Score=92.67 Aligned_cols=115 Identities=10% Similarity=0.150 Sum_probs=76.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC--CCCCCc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP--CFKDTP 723 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p--~f~~tp 723 (844)
..+++||++|+ ...+. |..++.+++++|+|+|+++ ...+.+....++.+.... ...+.|
T Consensus 69 ~~l~i~Dt~G~-~~~~~-~~~~~~~~~~~ilv~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~~~p 129 (187)
T 3c5c_A 69 VHLRVMDTADL-DTPRN-CERYLNWAHAFLVVYSVDS-----------------RQSFDSSSSYLELLALHAKETQRSIP 129 (187)
T ss_dssp EEEEEEECCC----CCC-THHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EEEEEEECCCC-Ccchh-HHHHHhhCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHHhhccCCCCC
Confidence 67999999999 55544 6778999999999999985 233444444444444321 124789
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEee-cCCCCHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARA-RDRVTVD 802 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~A-tDte~I~ 802 (844)
+||++||+|+..++ .+. .+++.+|... + .+-++.||| .++.+|+
T Consensus 130 iilv~nK~Dl~~~~----~v~--------------------~~~~~~~~~~----~-------~~~~~e~Sa~~~g~gv~ 174 (187)
T 3c5c_A 130 ALLLGNKLDMAQYR----QVT--------------------KAEGVALAGR----F-------GCLFFEVSACLDFEHVQ 174 (187)
T ss_dssp EEEEEECGGGGGGC----SSC--------------------HHHHHHHHHH----H-------TCEEEECCSSSCSHHHH
T ss_pred EEEEEECcchhhcC----ccC--------------------HHHHHHHHHH----c-------CCcEEEEeecCccccHH
Confidence 99999999996531 111 2333333321 1 134778999 8999999
Q ss_pred HHHHHHHHHHhh
Q 042025 803 EAFKYIREVLKW 814 (844)
Q Consensus 803 evF~~V~e~Ik~ 814 (844)
++|++|.+.+..
T Consensus 175 ~lf~~l~~~i~~ 186 (187)
T 3c5c_A 175 HVFHEAVREARR 186 (187)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999987753
No 85
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.66 E-value=1.1e-07 Score=92.79 Aligned_cols=117 Identities=15% Similarity=0.182 Sum_probs=80.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++.+ .+.+....++.+.... -.+.|+|
T Consensus 69 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~~~-----------------s~~~~~~~~~~i~~~~-~~~~pii 129 (213)
T 3cph_A 69 VKLQLWDTAGQ-ERFRTITTAYYRGAMGIILVYDVTDER-----------------TFTNIKQWFKTVNEHA-NDEAQLL 129 (213)
T ss_dssp EEEEEECCTTG-GGGTCCCHHHHTTCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHHHT-TTCSEEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHhccCCEEEEEEECCCHH-----------------HHHHHHHHHHHHHHhc-CCCCCEE
Confidence 57999999999 778889999999999999999998522 2222233334443321 2368999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... .. .+.+.++. .+ . .+.++.+||.++.+|+++|
T Consensus 130 lv~nK~Dl~~~~-----~~--------------------~~~~~~~~-~~----~------~~~~~~~Sa~~~~gi~~l~ 173 (213)
T 3cph_A 130 LVGNKSDMETRV-----VT--------------------ADQGEALA-KE----L------GIPFIESSAKNDDNVNEIF 173 (213)
T ss_dssp EEEECTTCSSCC-----SC--------------------HHHHHHHH-HH----H------TCCEEECBTTTTBSSHHHH
T ss_pred EEEECCCCcccc-----cC--------------------HHHHHHHH-HH----c------CCEEEEEeCCCCCCHHHHH
Confidence 999999983210 10 12332222 11 1 1247889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+.....
T Consensus 174 ~~l~~~~~~~~~ 185 (213)
T 3cph_A 174 FTLAKLIQEKID 185 (213)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999998866543
No 86
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=98.66 E-value=7.6e-08 Score=93.58 Aligned_cols=118 Identities=12% Similarity=0.177 Sum_probs=83.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++++||++|+ ...+..|..++.+++++|||+|+++ ...+.....++..+... ...+.|++
T Consensus 57 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~ii~v~d~~~-----------------~~s~~~~~~~~~~i~~~-~~~~~pii 117 (203)
T 1zbd_A 57 IKLQIWDTAGL-ERYRTITTAYYRGAMGFILMYDITN-----------------EESFNAVQDWSTQIKTY-SWDNAQVL 117 (203)
T ss_dssp EEEEEEEECCS-GGGHHHHHTTGGGCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHH-SCSSCEEE
T ss_pred EEEEEEECCCc-hhhcchHHHhhcCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHh-cCCCCCEE
Confidence 57899999999 7778899999999999999999885 22333444444444432 23578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+.+.++. .+ . .+.++.+||.++.+|+++|
T Consensus 118 lv~nK~Dl~~~~----~~~--------------------~~~~~~~~-~~----~------~~~~~~~Sa~~~~gi~~l~ 162 (203)
T 1zbd_A 118 LVGNKCDMEDER----VVS--------------------SERGRQLA-DH----L------GFEFFEASAKDNINVKQTF 162 (203)
T ss_dssp EEEECTTCTTSC----CSC--------------------HHHHHHHH-HH----H------TCEEEECBTTTTBSSHHHH
T ss_pred EEEECcccCccc----ccC--------------------HHHHHHHH-HH----C------CCeEEEEECCCCCCHHHHH
Confidence 999999986531 010 12332222 11 1 1357889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.+..+..
T Consensus 163 ~~l~~~i~~~~~ 174 (203)
T 1zbd_A 163 ERLVDVICEKMS 174 (203)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998876543
No 87
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=98.66 E-value=9.1e-08 Score=93.34 Aligned_cols=121 Identities=16% Similarity=0.154 Sum_probs=78.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+ .+.+....++.+.. ....+.|+|
T Consensus 77 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~iilv~d~~~~~-----------------s~~~~~~~~~~i~~-~~~~~~pii 137 (199)
T 2p5s_A 77 TVLQLWDTAGQ-ERFRSIAKSYFRKADGVLLLYDVTCEK-----------------SFLNIREWVDMIED-AAHETVPIM 137 (199)
T ss_dssp EEEEEEECTTC-TTCHHHHHHHHHHCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHH-HC---CCEE
T ss_pred EEEEEEECCCC-cchhhhHHHHHhhCCEEEEEEECCChH-----------------HHHHHHHHHHHHHH-hcCCCCCEE
Confidence 57999999999 778888999999999999999998521 11222222222222 122468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+....-... ... . . .+.+.+|.. .. .+.++.|||.++.+|+++|
T Consensus 138 lv~NK~Dl~~~~~~~~-~~~------v--------~---~~~~~~~~~-----~~------~~~~~~~SA~~g~gv~el~ 188 (199)
T 2p5s_A 138 LVGNKADIRDTAATEG-QKC------V--------P---GHFGEKLAM-----TY------GALFCETSAKDGSNIVEAV 188 (199)
T ss_dssp EEEECGGGHHHHHHTT-CCC------C--------C---HHHHHHHHH-----HH------TCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccccccc-ccc------c--------C---HHHHHHHHH-----Hc------CCeEEEeeCCCCCCHHHHH
Confidence 9999999976421100 000 0 0 123333221 11 2457889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 189 ~~l~~~i~~ 197 (199)
T 2p5s_A 189 LHLAREVKK 197 (199)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999988753
No 88
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=98.65 E-value=1.2e-07 Score=93.46 Aligned_cols=126 Identities=15% Similarity=0.187 Sum_probs=79.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++ ...+.+....|-..+.... .+.|+|
T Consensus 78 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~~-~~~pii 138 (204)
T 4gzl_A 78 VNLGLWDTAGL-EDYDRLRPLSYPQTDVFLICFSLVS-----------------PASFENVRAKWYPEVRHHC-PNTPII 138 (204)
T ss_dssp EEEEEEEECCS-GGGTTTGGGGCTTCSEEEEEEETTC-----------------HHHHHHHHHTHHHHHHHHC-SSCCEE
T ss_pred EEEEEEECCCc-hhhHHHHHHHhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHHhC-CCCCEE
Confidence 57889999999 7888899999999999999999985 2333344322333333222 578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+.-....+... .... -. .+++..|. ... ....++.|||.++.||+++|
T Consensus 139 lv~nK~Dl~~~~~~~~~~~~~----~~~~-----v~---~~~~~~~~-----~~~-----~~~~~~~~SA~~g~gi~~l~ 196 (204)
T 4gzl_A 139 LVGTKLDLRDDKDTIEKLKEK----KLTP-----IT---YPQGLAMA-----KEI-----GAVKYLECSALTQRGLKTVF 196 (204)
T ss_dssp EEEECHHHHTCHHHHHHHHHT----TCCC-----CC---HHHHHHHH-----HHT-----TCSEEEECCTTTCTTHHHHH
T ss_pred EEEechhhccchhhhhhhhcc----cccc-----cc---HHHHHHHH-----Hhc-----CCcEEEEeeCCCCCCHHHHH
Confidence 999999997643211000000 0000 00 22332222 111 12347889999999999999
Q ss_pred HHHHHHH
Q 042025 806 KYIREVL 812 (844)
Q Consensus 806 ~~V~e~I 812 (844)
++|.+.+
T Consensus 197 ~~l~~~~ 203 (204)
T 4gzl_A 197 DEAIRAV 203 (204)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9998754
No 89
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=98.65 E-value=9.4e-08 Score=92.84 Aligned_cols=117 Identities=12% Similarity=0.086 Sum_probs=81.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
+.+++||++|+ ...+ ++.+++++|||+|+++ ...+.+...++..+.......+.|++
T Consensus 67 ~~l~i~Dt~G~-~~~~-----~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pii 123 (184)
T 3ihw_A 67 YLLLIRDEGGP-PELQ-----FAAWVDAVVFVFSLED-----------------EISFQTVYNYFLRLCSFRNASEVPMV 123 (184)
T ss_dssp EEEEEEECSSS-CCHH-----HHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHTTSCGGGSCEE
T ss_pred EEEEEEECCCC-hhhh-----eecCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 56889999999 4433 7889999999999985 34455666777888776555679999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+.- ..+ . .+++.++. ... ..+.++.|||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~~~--~~v-----------------~---~~~~~~~~-----~~~-----~~~~~~e~Sa~~~~gv~~lf 171 (184)
T 3ihw_A 124 LVGTQDAISAANP--RVI-----------------D---DSRARKLS-----TDL-----KRCTYYETCATYGLNVERVF 171 (184)
T ss_dssp EEEECTTCBTTBC--CCS-----------------C---HHHHHHHH-----HHT-----TTCEEEEEBTTTTBTHHHHH
T ss_pred EEEECcccccccc--ccc-----------------C---HHHHHHHH-----HHc-----CCCeEEEecCCCCCCHHHHH
Confidence 9999999864210 001 0 23333322 111 12446789999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
+++.+.+....+
T Consensus 172 ~~l~~~i~~~~~ 183 (184)
T 3ihw_A 172 QDVAQKVVALRK 183 (184)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999998876544
No 90
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=98.65 E-value=1.8e-07 Score=92.77 Aligned_cols=119 Identities=13% Similarity=0.152 Sum_probs=80.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+ .+......++.+... .-.+.|+|
T Consensus 75 ~~l~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~D~~~~~-----------------s~~~~~~~~~~i~~~-~~~~~pii 135 (201)
T 2ew1_A 75 VKLQIWDTAGQ-ERFRSITQSYYRSANALILTYDITCEE-----------------SFRCLPEWLREIEQY-ASNKVITV 135 (201)
T ss_dssp EEEEEEEECCS-GGGHHHHGGGSTTCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHHH-SCTTCEEE
T ss_pred EEEEEEECCCc-HHHHHHHHHHHhcCCEEEEEEECCCHH-----------------HHHHHHHHHHHHHHh-cCCCCCEE
Confidence 57999999999 777888999999999999999998522 122222233333221 12468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+++..|. ... .+.++.|||.++.+|+++|
T Consensus 136 lv~NK~Dl~~~~----~v~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~g~gv~~l~ 180 (201)
T 2ew1_A 136 LVGNKIDLAERR----EVS--------------------QQRAEEFS-----EAQ------DMYYLETSAKESDNVEKLF 180 (201)
T ss_dssp EEEECGGGGGGC----SSC--------------------HHHHHHHH-----HHH------TCCEEECCTTTCTTHHHHH
T ss_pred EEEECCCCcccc----ccC--------------------HHHHHHHH-----HHc------CCEEEEEeCCCCCCHHHHH
Confidence 999999996531 111 12333322 111 2347889999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 181 ~~l~~~i~~~~~~ 193 (201)
T 2ew1_A 181 LDLACRLISEARQ 193 (201)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999888765443
No 91
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=98.63 E-value=2.1e-07 Score=89.43 Aligned_cols=128 Identities=14% Similarity=0.071 Sum_probs=79.6
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHH-HHHHcCCCCCCCc
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELF-EMMIRHPCFKDTP 723 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LF-esI~n~p~f~~tp 723 (844)
...+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....| ..+-.. ..+.|
T Consensus 54 ~~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~~-----------------~s~~~~~~~~~~~i~~~--~~~~p 113 (184)
T 1m7b_A 54 RIELSLWDTSGS-PYYDNVRPLSYPDSDAVLICFDISRP-----------------ETLDSVLKKWKGEIQEF--CPNTK 113 (184)
T ss_dssp EEEEEEEEECCS-GGGTTTGGGGCTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH--CTTCE
T ss_pred EEEEEEEECCCC-hhhhhhHHhhcCCCcEEEEEEECCCH-----------------HHHHHHHHHHHHHHHHH--CCCCC
Confidence 367999999999 67788899999999999999999852 2233332222 222221 24789
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec-CCCCHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR-DRVTVD 802 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At-Dte~I~ 802 (844)
+||++||.|+..+.-....+... .... -. .+++.+|.. .. ..+.++.|||. ++.+|+
T Consensus 114 iilv~nK~Dl~~~~~~~~~~~~~----~~~~-----v~---~~~~~~~~~-----~~-----~~~~~~e~Sa~~~~~gi~ 171 (184)
T 1m7b_A 114 MLLVGCKSDLRTDVSTLVELSNH----RQTP-----VS---YDQGANMAK-----QI-----GAATYIECSALQSENSVR 171 (184)
T ss_dssp EEEEEECGGGGGCHHHHHHHHTT----TCCC-----CC---HHHHHHHHH-----HH-----TCSEEEECBTTTBHHHHH
T ss_pred EEEEEEcchhhcchhhHhhhhhc----ccCC-----CC---HHHHHHHHH-----Hc-----CCcEEEEeeecCCCcCHH
Confidence 99999999997532110001000 0000 00 233333221 11 12346789997 689999
Q ss_pred HHHHHHHHHHhh
Q 042025 803 EAFKYIREVLKW 814 (844)
Q Consensus 803 evF~~V~e~Ik~ 814 (844)
++|+++.+.+..
T Consensus 172 ~l~~~i~~~~l~ 183 (184)
T 1m7b_A 172 DIFHVATLACVN 183 (184)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 999999988754
No 92
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=98.63 E-value=9.2e-08 Score=94.80 Aligned_cols=115 Identities=14% Similarity=0.224 Sum_probs=80.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+......+..+... ..+.|+|
T Consensus 64 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~--~~~~p~i 123 (221)
T 3gj0_A 64 IKFNVWDTAGQ-EKFGGLRDGYYIQAQCAIIMFDVTSR-----------------VTYKNVPNWHRDLVRV--CENIPIV 123 (221)
T ss_dssp EEEEEEEECSG-GGTSCCCHHHHTTCCEEEEEEETTCH-----------------HHHHTHHHHHHHHHHH--STTCCEE
T ss_pred EEEEEEeCCCh-HHHhHHHHHHHhcCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHh--CCCCCEE
Confidence 67999999999 78888999999999999999999852 2222223334444432 2478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++... .+..|. .. ..+.++.|||.++.+|+++|
T Consensus 124 lv~nK~Dl~~~~~~~--------------------------~~~~~~-----~~------~~~~~~~~Sa~~~~gi~~l~ 166 (221)
T 3gj0_A 124 LCGNKVDIKDRKVKA--------------------------KSIVFH-----RK------KNLQYYDISAKSNYNFEKPF 166 (221)
T ss_dssp EEEECTTSSSCSSCG--------------------------GGCCHH-----HH------HTCEEEECBGGGTBTTTHHH
T ss_pred EEEECCccccccccH--------------------------HHHHHH-----HH------cCCEEEEEeCCCCCCHHHHH
Confidence 999999986542110 000111 11 12457889999999999999
Q ss_pred HHHHHHHhhhhh
Q 042025 806 KYIREVLKWDDE 817 (844)
Q Consensus 806 ~~V~e~Ik~~~~ 817 (844)
++|.+.|.....
T Consensus 167 ~~l~~~l~~~~~ 178 (221)
T 3gj0_A 167 LWLARKLIGDPN 178 (221)
T ss_dssp HHHHHHHHTCTT
T ss_pred HHHHHHHHhCcc
Confidence 999998865543
No 93
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=98.62 E-value=3.2e-07 Score=86.91 Aligned_cols=117 Identities=11% Similarity=0.106 Sum_probs=76.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHH---HHHHHHcCCCCCCC
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKE---LFEMMIRHPCFKDT 722 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~---LFesI~n~p~f~~t 722 (844)
.++++||++|+ .. ..++.+++++|||+|+++ ...+..... .+..+..+ ...+.
T Consensus 54 ~~l~i~Dt~G~-~~-----~~~~~~~d~~ilv~D~~~-----------------~~s~~~~~~~~~~i~~~~~~-~~~~~ 109 (178)
T 2iwr_A 54 HLVLIREEAGA-PD-----AKFSGWADAVIFVFSLED-----------------ENSFQAVSRLHGQLSSLRGE-GRGGL 109 (178)
T ss_dssp EEEEEEECSSS-CC-----HHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHCS-SSCCC
T ss_pred EEEEEEECCCC-ch-----hHHHHhCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence 57899999999 32 467889999999999985 122333333 34444332 23578
Q ss_pred cEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHH
Q 042025 723 PFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVD 802 (844)
Q Consensus 723 piILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ 802 (844)
|++|++||.|+..+. .... . .+++.+|.. .. ..+.++.|||.++.+|+
T Consensus 110 piilv~nK~Dl~~~~--~~~v-----------------~---~~~~~~~~~----~~------~~~~~~~~Sa~~~~~i~ 157 (178)
T 2iwr_A 110 ALALVGTQDRISASS--PRVV-----------------G---DARARALXA----DM------KRCSYYETXATYGLNVD 157 (178)
T ss_dssp EEEEEEECTTCBTTB--CCCS-----------------C---HHHHHHHHH----HH------SSEEEEEEBTTTTBTHH
T ss_pred CEEEEEECccccccc--cCcC-----------------C---HHHHHHHHH----hh------cCCeEEEEeccccCCHH
Confidence 999999999985320 0000 0 233333221 11 13567889999999999
Q ss_pred HHHHHHHHHHhhhhhc
Q 042025 803 EAFKYIREVLKWDDEK 818 (844)
Q Consensus 803 evF~~V~e~Ik~~~~k 818 (844)
++|+++.+.+.....+
T Consensus 158 ~lf~~l~~~~~~~~~~ 173 (178)
T 2iwr_A 158 RVFQEVAQKVVTLRKQ 173 (178)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999888665443
No 94
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=98.62 E-value=1.3e-07 Score=92.61 Aligned_cols=127 Identities=14% Similarity=0.204 Sum_probs=80.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....|...+.. ...+.|++
T Consensus 73 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~-~~~~~pii 133 (201)
T 2gco_A 73 VELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSIDSP-----------------DSLENIPEKWTPEVKH-FCPNVPII 133 (201)
T ss_dssp EEEEEECCCCS-GGGTTTGGGGCTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHH-HSTTCCEE
T ss_pred EEEEEEECCCc-hhHHHHHHHhcCCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHH-hCCCCCEE
Confidence 57899999999 77888999999999999999998852 2233332222222222 12478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+.-....+. +.... .-. .+++.++. ... ..+.++.|||.++.+|+++|
T Consensus 134 lv~nK~Dl~~~~~~~~~~~------~~~~~---~v~---~~~~~~~~-----~~~-----~~~~~~~~SA~~g~gi~~l~ 191 (201)
T 2gco_A 134 LVGNKKDLRQDEHTRRELA------KMKQE---PVR---SEEGRDMA-----NRI-----SAFGYLECSAKTKEGVREVF 191 (201)
T ss_dssp EEEECGGGTTCHHHHHHHH------TTTCC---CCC---HHHHHHHH-----HHT-----TCSEEEECCTTTCTTHHHHH
T ss_pred EEEecHHhhcCccchhhhc------ccccC---cCC---HHHHHHHH-----HhC-----CCcEEEEeeCCCCCCHHHHH
Confidence 9999999986532111111 10000 000 23333221 111 11247789999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 192 ~~i~~~~l 199 (201)
T 2gco_A 192 EMATRAGL 199 (201)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998765
No 95
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=98.61 E-value=8.9e-08 Score=88.22 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=80.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|+|+|+++ ...+.+...+++.+.......+.|++
T Consensus 51 ~~~~~~D~~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~~~~~~~~~~~~i~~~~~~~~~p~i 112 (166)
T 2ce2_X 51 CLLDILDTAGQ-EEYSAMRDQYMRTGEGFLCVFAINN-----------------TKSFEDIHQYREQIKRVKDSDDVPMV 112 (166)
T ss_dssp EEEEEEECCCC-SSCCHHHHHHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHHTCSCCCEE
T ss_pred EEEEEEECCCc-hhhhHHHHHhhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 56889999999 6778889999999999999999885 22333444444444443333478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+.... .. .+.+.++. .+ . .+.++.+||.++.+++++|
T Consensus 113 iv~nK~Dl~~~~-----~~--------------------~~~~~~~~-~~----~------~~~~~~~Sa~~~~gi~~l~ 156 (166)
T 2ce2_X 113 LVGNKSDLAART-----VE--------------------SRQAQDLA-RS----Y------GIPYIETSAKTRQGVEDAF 156 (166)
T ss_dssp EEEECTTCSCCC-----SC--------------------HHHHHHHH-HH----H------TCCEEEECTTTCTTHHHHH
T ss_pred EEEEchhhhhcc-----cC--------------------HHHHHHHH-HH----c------CCeEEEecCCCCCCHHHHH
Confidence 999999986520 00 12232222 11 1 1347889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
+++.+.+.
T Consensus 157 ~~l~~~~~ 164 (166)
T 2ce2_X 157 YTLVREIR 164 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 96
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.60 E-value=2.2e-07 Score=91.32 Aligned_cols=129 Identities=14% Similarity=0.179 Sum_probs=80.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++. ..+.+....|...+.. ...+.|++
T Consensus 73 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~-~~~~~pii 133 (207)
T 2fv8_A 73 VELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSVDSP-----------------DSLENIPEKWVPEVKH-FCPNVPII 133 (207)
T ss_dssp EEEEEEECTTC-TTCTTTGGGGCTTCCEEEEEEETTCH-----------------HHHHHHHHTHHHHHHH-HSTTCCEE
T ss_pred EEEEEEECCCc-HHHHHHHHhhcCCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHH-hCCCCCEE
Confidence 47899999999 77888999999999999999998852 2222331222222221 12478999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..+......+. ++... .-. .+++..+. ... ..+.++.|||.++.+|+++|
T Consensus 134 lv~nK~Dl~~~~~~~~~~~------~~~~~---~v~---~~~~~~~~-----~~~-----~~~~~~~~SA~~g~gi~el~ 191 (207)
T 2fv8_A 134 LVANKKDLRSDEHVRTELA------RMKQE---PVR---TDDGRAMA-----VRI-----QAYDYLECSAKTKEGVREVF 191 (207)
T ss_dssp EEEECGGGGGCHHHHHHHH------HTTCC---CCC---HHHHHHHH-----HHT-----TCSEEEECCTTTCTTHHHHH
T ss_pred EEEEchhhhccccchhhhh------hcccC---CCC---HHHHHHHH-----Hhc-----CCCEEEEeeCCCCCCHHHHH
Confidence 9999999976432111111 01000 000 22332221 111 12257789999999999999
Q ss_pred HHHHHHHhhh
Q 042025 806 KYIREVLKWD 815 (844)
Q Consensus 806 ~~V~e~Ik~~ 815 (844)
++|.+.+...
T Consensus 192 ~~l~~~i~~~ 201 (207)
T 2fv8_A 192 ETATRAALQK 201 (207)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHH
Confidence 9999887643
No 97
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=98.59 E-value=7.7e-08 Score=89.59 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=77.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC-CCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH-PCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~-p~f~~tpi 724 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++-+ .+.+...+++.+... ..+.+.|+
T Consensus 51 ~~~~~~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~~~-----------------~~~~~~~~~~~i~~~~~~~~~~pi 112 (172)
T 2erx_A 51 CTLQITDTTGS-HQFPAMQRLSISKGHAFILVYSITSRQ-----------------SLEELKPIYEQICEIKGDVESIPI 112 (172)
T ss_dssp EEEEEEECCSC-SSCHHHHHHHHHHCSEEEEEEETTCHH-----------------HHHTTHHHHHHHHHHHC---CCCE
T ss_pred EEEEEEECCCc-hhhHHHHHHhcccCCEEEEEEECcCHH-----------------HHHHHHHHHHHHHHHhCCCCCCCE
Confidence 46889999999 677888999999999999999998521 222223333333321 23457899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
+|++||.|+..++ .+. .+.+..+. ... .+.++.+||.++.+|+++
T Consensus 113 i~v~nK~Dl~~~~----~v~--------------------~~~~~~~~-----~~~------~~~~~~~Sa~~~~gi~~l 157 (172)
T 2erx_A 113 MLVGNKCDESPSR----EVQ--------------------SSEAEALA-----RTW------KCAFMETSAKLNHNVKEL 157 (172)
T ss_dssp EEEEECGGGGGGC----CSC--------------------HHHHHHHH-----HHH------TCEEEECBTTTTBSHHHH
T ss_pred EEEEEcccccccc----ccC--------------------HHHHHHHH-----HHh------CCeEEEecCCCCcCHHHH
Confidence 9999999997541 111 12222211 111 235788999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.+..
T Consensus 158 ~~~l~~~~~~ 167 (172)
T 2erx_A 158 FQELLNLEKR 167 (172)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHHHHhh
Confidence 9999987643
No 98
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=98.59 E-value=3.6e-07 Score=85.11 Aligned_cols=114 Identities=12% Similarity=0.148 Sum_probs=79.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||+.|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+... ...+.|++
T Consensus 55 ~~~~~~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~-----------------~~s~~~~~~~~~~l~~~-~~~~~~ii 115 (170)
T 1z0j_A 55 HKFLIWDTAGL-ERFRALAPMYYRGSAAAIIVYDITK-----------------EETFSTLKNWVRELRQH-GPPSIVVA 115 (170)
T ss_dssp EEEEEEEECCS-GGGGGGTHHHHTTCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHH-SCTTSEEE
T ss_pred EEEEEEcCCCc-hhhhcccHhhCcCCCEEEEEEECcC-----------------HHHHHHHHHHHHHHHHh-CCCCCcEE
Confidence 57999999999 7788899999999999999999885 12233333344444432 23568999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++ ... .+.+..+. .. ..+.++.+||.++.+|++.|
T Consensus 116 lv~nK~Dl~~~~----~v~--------------------~~~~~~~~-----~~------~~~~~~~~Sa~~~~~i~~l~ 160 (170)
T 1z0j_A 116 IAGNKCDLTDVR----EVM--------------------ERDAKDYA-----DS------IHAIFVETSAKNAININELF 160 (170)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHH-----HH------TTCEEEECBTTTTBSHHHHH
T ss_pred EEEECCcccccc----ccC--------------------HHHHHHHH-----HH------cCCEEEEEeCCCCcCHHHHH
Confidence 999999997531 010 12222221 11 12457889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 161 ~~i~~~i~ 168 (170)
T 1z0j_A 161 IEISRRIP 168 (170)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHh
Confidence 99988764
No 99
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=98.59 E-value=1.4e-07 Score=89.21 Aligned_cols=125 Identities=14% Similarity=0.123 Sum_probs=76.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+....|-..+... ..+.|++
T Consensus 56 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~-----------------~s~~~~~~~~~~~~~~~-~~~~pii 116 (182)
T 3bwd_D 56 VNLGLWDTAGQ-EDYNRLRPLSYRGADVFILAFSLISK-----------------ASYENVSKKWIPELKHY-APGVPIV 116 (182)
T ss_dssp --CEEECCCC--CTTTTTGGGGGTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH-CTTCCEE
T ss_pred EEEEEEECCCC-hhhhhhHHhhccCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHHh-CCCCCEE
Confidence 46789999999 78889999999999999999998851 22333332222222211 2378999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||.|+..++-.... .+.-.. -. .+++.++. ... + ...++.|||.++.+|+++|
T Consensus 117 lv~nK~Dl~~~~~~~~~------~~~~~~-----v~---~~~~~~~~-----~~~----~-~~~~~~~Sa~~~~gi~~l~ 172 (182)
T 3bwd_D 117 LVGTKLDLRDDKQFFID------HPGAVP-----IT---TVQGEELK-----KLI----G-APAYIECSSKSQENVKGVF 172 (182)
T ss_dssp EEEECHHHHTCHHHHHH------C--CCC-----CC---HHHHHHHH-----HHH----T-CSEEEECCTTTCTTHHHHH
T ss_pred EEEechhhhcCcccccc------cccCCC-----CC---HHHHHHHH-----HHc----C-CCEEEEEECCCCCCHHHHH
Confidence 99999999765321000 000000 00 23333322 111 1 1246789999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
+++.+.+.
T Consensus 173 ~~l~~~i~ 180 (182)
T 3bwd_D 173 DAAIRVVL 180 (182)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99988764
No 100
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=98.58 E-value=2e-07 Score=91.61 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=55.4
Q ss_pred ceEEEEEeCCCCCCCcc-cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC--CCCC
Q 042025 646 TKYQLIRVNAKGMNEGC-KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC--FKDT 722 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~-KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~--f~~t 722 (844)
.++++||++|+ ...+. .|..|+.+++++|||+|++++. ..+.+..+.+..++.+.. -.+.
T Consensus 54 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~~i~v~d~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 116 (214)
T 2fh5_B 54 NSLTLIDLPGH-ESLRFQLLDRFKSSARAVVFVVDSAAFQ----------------REVKDVAEFLYQVLIDSMALKNSP 116 (214)
T ss_dssp CEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEETTTHH----------------HHHHHHHHHHHHHHHHHHTSTTCC
T ss_pred cEEEEEECCCC-hhHHHHHHHHHHhhCCEEEEEEECCCcC----------------HHHHHHHHHHHHHHhhhhhcccCC
Confidence 67999999999 66666 6888999999999999988532 224455566666554421 2358
Q ss_pred cEEEEecccchhhh
Q 042025 723 PFVLILNKYDLFEE 736 (844)
Q Consensus 723 piILfLNK~DLfee 736 (844)
|++|++||+|+..+
T Consensus 117 piilv~nK~Dl~~~ 130 (214)
T 2fh5_B 117 SLLIACNKQDIAMA 130 (214)
T ss_dssp EEEEEEECTTSTTC
T ss_pred CEEEEEECCCCCCc
Confidence 99999999999754
No 101
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=98.58 E-value=3.2e-07 Score=91.00 Aligned_cols=128 Identities=15% Similarity=0.088 Sum_probs=79.5
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHH-HHHHHHcCCCCCCCc
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKE-LFEMMIRHPCFKDTP 723 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~-LFesI~n~p~f~~tp 723 (844)
...+++||++|+ ...+..|..++.+++++|||+|+++- ..+.+... ++..+-.. ..+.|
T Consensus 75 ~~~l~i~Dt~G~-~~~~~~~~~~~~~~d~~ilv~D~~~~-----------------~s~~~~~~~~~~~i~~~--~~~~p 134 (205)
T 1gwn_A 75 RIELSLWDTSGS-PYYDNVRPLSYPDSDAVLICFDISRP-----------------ETLDSVLKKWKGEIQEF--CPNTK 134 (205)
T ss_dssp EEEEEEEEECCS-GGGTTTGGGGCTTCSEEEEEEETTCH-----------------HHHHHHHHTHHHHHHHH--CTTCE
T ss_pred EEEEEEEeCCCc-HhhhHHHHhhccCCCEEEEEEECCCH-----------------HHHHHHHHHHHHHHHHH--CCCCC
Confidence 367999999999 67788899999999999999999852 22333322 22222221 24789
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec-CCCCHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR-DRVTVD 802 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At-Dte~I~ 802 (844)
+||++||+|+..+.-....+... ..... . .+++.+|.. + + ..+.++.|||. ++.+|+
T Consensus 135 iilv~nK~Dl~~~~~~~~~~~~~----~~~~v-----~---~~~~~~~~~-~---~------~~~~~~e~SAk~~~~gv~ 192 (205)
T 1gwn_A 135 MLLVGCKSDLRTDVSTLVELSNH----RQTPV-----S---YDQGANMAK-Q---I------GAATYIECSALQSENSVR 192 (205)
T ss_dssp EEEEEECGGGGGCHHHHHHHHTT----TCCCC-----C---HHHHHHHHH-H---H------TCSEEEECCTTTCHHHHH
T ss_pred EEEEEechhhccchhhhhhhccc----ccCCC-----C---HHHHHHHHH-H---c------CCCEEEEeeeccCCcCHH
Confidence 99999999997532110001000 00000 0 233333221 1 1 12346789998 689999
Q ss_pred HHHHHHHHHHhh
Q 042025 803 EAFKYIREVLKW 814 (844)
Q Consensus 803 evF~~V~e~Ik~ 814 (844)
++|++|.+.+..
T Consensus 193 ~lf~~l~~~~l~ 204 (205)
T 1gwn_A 193 DIFHVATLACVN 204 (205)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999987764
No 102
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=98.57 E-value=2.4e-07 Score=90.94 Aligned_cols=119 Identities=12% Similarity=0.097 Sum_probs=80.8
Q ss_pred ceEEEEEeCCCCCCCcc-cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGC-KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~-KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
+.+.+||++|+ ...+. .|..+|.+++++|||+|+++ ...+......+..+.......+.|+
T Consensus 72 ~~l~i~Dt~g~-~~~~~~~~~~~~~~~d~~ilv~d~~~-----------------~~s~~~~~~~~~~i~~~~~~~~~pi 133 (195)
T 3cbq_A 72 VTLVVYDIWEQ-GDAGGWLRDHCLQTGDAFLIVFSVTD-----------------RRSFSKVPETLLRLRAGRPHHDLPV 133 (195)
T ss_dssp EEEEEECCCCC-SGGGHHHHHHHHHHCSEEEEEEETTC-----------------HHHHHTHHHHHHHHHHHSTTSCCCE
T ss_pred EEEEEEecCCC-ccchhhhHHHhhccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 57889999999 44443 67778999999999999985 2233334455555555433457899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||.|+..++ .++ .+++..|. ... .+-++.|||.++.+|+++
T Consensus 134 ilv~nK~Dl~~~~----~v~--------------------~~~~~~~a-----~~~------~~~~~e~Sa~~~~~v~~l 178 (195)
T 3cbq_A 134 ILVGNKSDLARSR----EVS--------------------LEEGRHLA-----GTL------SCKHIETSAALHHNTREL 178 (195)
T ss_dssp EEEEECTTCTTTC----CSC--------------------HHHHHHHH-----HHT------TCEEEEEBTTTTBSHHHH
T ss_pred EEEeechhccccC----CcC--------------------HHHHHHHH-----HHh------CCEEEEEcCCCCCCHHHH
Confidence 9999999986531 111 22332221 111 134678999999999999
Q ss_pred HHHHHHHHhhhhh
Q 042025 805 FKYIREVLKWDDE 817 (844)
Q Consensus 805 F~~V~e~Ik~~~~ 817 (844)
|+++.+.|.....
T Consensus 179 f~~l~~~i~~~~~ 191 (195)
T 3cbq_A 179 FEGAVRQIRLRRG 191 (195)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhcC
Confidence 9999988865443
No 103
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=98.57 E-value=2e-07 Score=87.88 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=81.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++..++++|||+|+++- .+.++++.+..+.. .+.|++
T Consensus 55 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~------------------~~~~~~~~l~~~~~----~~~p~i 111 (178)
T 2lkc_A 55 KKITFLDTPGH-EAFTTMRARGAQVTDIVILVVAADDG------------------VMPQTVEAINHAKA----ANVPII 111 (178)
T ss_dssp EEEEESCCCSS-SSSSCSCCSSCCCCCEEEEEEETTCC------------------CCHHHHHHHHHHGG----GSCCEE
T ss_pred ceEEEEECCCC-HHHHHHHHHHHhhCCEEEEEEECCCC------------------CcHHHHHHHHHHHh----CCCCEE
Confidence 46889999999 78888999999999999999998741 11234444544432 368999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... .+....++. .+..+. ...+..+.++.|||.++.+|+++|
T Consensus 112 lv~nK~Dl~~~~---------------------------~~~~~~~~~-~~~~~~-~~~~~~~~~~~~Sa~~~~gv~~l~ 162 (178)
T 2lkc_A 112 VAINKMDKPEAN---------------------------PDRVMQELM-EYNLVP-EEWGGDTIFCKLSAKTKEGLDHLL 162 (178)
T ss_dssp EEEETTTSSCSC---------------------------HHHHHHHHT-TTTCCB-TTTTSSEEEEECCSSSSHHHHHHH
T ss_pred EEEECccCCcCC---------------------------HHHHHHHHH-hcCcCh-hHcCCcccEEEEecCCCCCHHHHH
Confidence 999999986420 011111110 000011 011234678999999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 163 ~~l~~~~~~~~~~ 175 (178)
T 2lkc_A 163 EMILLVSEMEELK 175 (178)
T ss_dssp HHHHHHHHHTTTT
T ss_pred HHHHHhhhhhccc
Confidence 9999988765544
No 104
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=98.56 E-value=4.7e-08 Score=95.38 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=72.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+....++.+.. -.-.+.|+|
T Consensus 82 ~~~~i~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~i~~-~~~~~~p~i 142 (199)
T 3l0i_B 82 IKLQIWDTAGQ-ERFRTITSSYYRGAHGIIVVYDVTD-----------------QESFNNVKQWLQEIDR-YASENVNKL 142 (199)
T ss_dssp EEEEEECCTTC-TTCCCCSCC--CCCSEEEECC-CCC-----------------SHHHHHHHHHHHHHHS-CC-CCSEEE
T ss_pred EEEEEEECCCc-HhHHHHHHHHhhcCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHH-hccCCCCEE
Confidence 57999999999 7888999999999999999999885 2334444555555543 233578999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++. ... . .+.. |.... .+.++.+||.++.+|+++|
T Consensus 143 lv~nK~Dl~~~~~----v~~-------~-------------~~~~-----~~~~~------~~~~~~vSA~~g~gv~~l~ 187 (199)
T 3l0i_B 143 LVGNKCDLTTKKV----VDY-------T-------------TAKE-----FADSL------GIPFLETSAKNATNVEQSF 187 (199)
T ss_dssp EC-CCSSCC--CC----CCS-------C-------------C-CH-----HHHTT------TCCBCCCCC---HHHHHHH
T ss_pred EEEECccCCcccc----CCH-------H-------------HHHH-----HHHHc------CCeEEEEECCCCCCHHHHH
Confidence 9999999965421 110 0 0111 11111 1336779999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 188 ~~l~~~l~~ 196 (199)
T 3l0i_B 188 MTMAAEIKK 196 (199)
T ss_dssp HHHTTTTTT
T ss_pred HHHHHHHHH
Confidence 999876643
No 105
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=98.48 E-value=5.5e-07 Score=88.63 Aligned_cols=119 Identities=9% Similarity=0.153 Sum_probs=82.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||++|+ ...+..|..++.+++++|||+|+++-.. ...+.+-+..+..... .+.|++
T Consensus 61 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~~~s--------------~~~~~~~~~~~~~~~~----~~~pii 121 (218)
T 4djt_A 61 IKFNVWDTAGQ-EKKAVLKDVYYIGASGAILFFDVTSRIT--------------CQNLARWVKEFQAVVG----NEAPIV 121 (218)
T ss_dssp EEEEEEEECSG-GGTSCCCHHHHTTCSEEEEEEETTCHHH--------------HHTHHHHHHHHHHHHC----SSSCEE
T ss_pred EEEEEEecCCc-hhhchHHHHHhhcCCEEEEEEeCCCHHH--------------HHHHHHHHHHHHHhcC----CCCCEE
Confidence 67999999999 7788899999999999999999986221 1223333344444443 358999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..++ .+. .+.+.. |.. ...+.++.+||.++.+|+++|
T Consensus 122 lv~nK~Dl~~~~----~~~--------------------~~~~~~-----~~~------~~~~~~~~~Sa~~g~gv~~l~ 166 (218)
T 4djt_A 122 VCANKIDIKNRQ----KIS--------------------KKLVME-----VLK------GKNYEYFEISAKTAHNFGLPF 166 (218)
T ss_dssp EEEECTTCC--------CC--------------------HHHHHH-----HTT------TCCCEEEEEBTTTTBTTTHHH
T ss_pred EEEECCCCcccc----ccC--------------------HHHHHH-----HHH------HcCCcEEEEecCCCCCHHHHH
Confidence 999999986531 010 112111 111 234568899999999999999
Q ss_pred HHHHHHHhhhhhc
Q 042025 806 KYIREVLKWDDEK 818 (844)
Q Consensus 806 ~~V~e~Ik~~~~k 818 (844)
++|.+.+.....+
T Consensus 167 ~~l~~~~~~~~~~ 179 (218)
T 4djt_A 167 LHLARIFTGRPDL 179 (218)
T ss_dssp HHHHHHHHCCTTC
T ss_pred HHHHHHHhccccc
Confidence 9999998665543
No 106
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=98.45 E-value=8.9e-07 Score=92.30 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=80.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHH-HHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKE-LFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~-LFesI~n~p~f~~tpi 724 (844)
+.+++||++|+ ...+..|..++.+++++|||+|+++ ...+.+... ++..+... ..+.|+
T Consensus 203 ~~~~l~Dt~G~-~~~~~~~~~~~~~~d~~i~v~d~~~-----------------~~s~~~~~~~~~~~~~~~--~~~~p~ 262 (332)
T 2wkq_A 203 VNLGLWDTAGL-EDYDRLRPLSYPQTDVFLICFSLVS-----------------PASFHHVRAKWYPEVRHH--CPNTPI 262 (332)
T ss_dssp EEEEEEEECCC-GGGTTTGGGGCTTCSEEEEEEETTC-----------------HHHHHHHHHTHHHHHHHH--CTTSCE
T ss_pred EEEEEEeCCCc-hhhhHHHHHhccCCCEEEEEEeCCC-----------------HHHHHHHHHHHHHHHHhh--CCCCcE
Confidence 56789999999 7788899999999999999999985 223333332 22233221 127899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||+|+..++-....+... .... -. .+.+.+|. ... ..+.++.|||.++.+|+++
T Consensus 263 ilv~nK~Dl~~~~~~~~~~~~~----~~~~-----v~---~~~~~~~~-----~~~-----~~~~~~~~Sa~~~~gi~~l 320 (332)
T 2wkq_A 263 ILVGTKLDLRDDKDTIEKLKEK----KLTP-----IT---YPQGLAMA-----KEI-----GAVKYLECSALTQRGLKTV 320 (332)
T ss_dssp EEEEECHHHHTCHHHHHHHHHT----TCCC-----CC---HHHHHHHH-----HHT-----TCSEEEECCTTTCTTHHHH
T ss_pred EEEEEchhcccccchhhhcccc----cccc-----cc---HHHHHHHH-----HHc-----CCcEEEEecCCCCcCHHHH
Confidence 9999999997542110000000 0000 00 23333322 111 1235788999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.+..
T Consensus 321 ~~~l~~~~~~ 330 (332)
T 2wkq_A 321 FDEAIRAVLC 330 (332)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999988754
No 107
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=98.32 E-value=2.1e-06 Score=86.73 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=78.8
Q ss_pred ceEEEEEeCCCCCC-CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMN-EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rs-eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..+.+||+.|+ .. ++..+..||..++++|+|.|+++ ...+.....++..+.......+.|+
T Consensus 87 ~~l~~~Dt~g~-~~~~~~l~~~~~~~a~~~ilVydvt~-----------------~~sf~~~~~~~~~l~~~~~~~~~pi 148 (211)
T 2g3y_A 87 ATIILLDMWEN-KGENEWLHDHCMQVGDAYLIVYSITD-----------------RASFEKASELRIQLRRARQTEDIPI 148 (211)
T ss_dssp EEEEEECCTTT-THHHHHHHHCCCCCCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHTSGGGTTSCE
T ss_pred eEEEEeecCCC-cchhhhHHHHHHhhCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHHhCCCCCcE
Confidence 46789999998 44 44455668899999999999885 3445555555555554333357899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||+|+..++ .+. .+++..| + ... .+.++.|||.++.+|+++
T Consensus 149 ilVgNK~DL~~~r----~v~--------------------~~e~~~~-a----~~~------~~~~~e~SAk~g~~v~el 193 (211)
T 2g3y_A 149 ILVGNKSDLVRCR----EVS--------------------VSEGRAC-A----VVF------DCKFIETSAAVQHNVKEL 193 (211)
T ss_dssp EEEEECTTCGGGC----CSC--------------------HHHHHHH-H----HHH------TCEEEECBTTTTBSHHHH
T ss_pred EEEEEChHHhcCc----eEe--------------------HHHHHHH-H----HHc------CCEEEEEeCCCCCCHHHH
Confidence 9999999996531 111 1222221 1 111 234778999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.|..
T Consensus 194 f~~l~~~i~~ 203 (211)
T 2g3y_A 194 FEGIVRQVRL 203 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 108
>3r7w_B Gtpase2, GTP-binding protein GTR2; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_B*
Probab=98.30 E-value=3.8e-07 Score=99.29 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=76.1
Q ss_pred ceEEEEEeCCCCCCCcc-c--ceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC--CCCC
Q 042025 646 TKYQLIRVNAKGMNEGC-K--WVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH--PCFK 720 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~-K--W~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~--p~f~ 720 (844)
+++++||++|| ...|. . |.+||.+++++|||+|+++- +.+++..|..++.. ....
T Consensus 46 v~LqIWDTAGQ-Erf~~~~l~~~~yyr~a~~~IlV~Ditd~-------------------~~~~~~~l~~~l~~~~~~~~ 105 (331)
T 3r7w_B 46 IDLAVMELPGQ-LNYFEPSYDSERLFKSVGALVYVIDSQDE-------------------YINAITNLAMIIEYAYKVNP 105 (331)
T ss_dssp SCEEEEECCSC-SSSCCCSHHHHHHHTTCSEEEEECCCSSC-------------------TTHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEECCCc-hhccchhhhhhhhccCCCEEEEEEECCch-------------------HHHHHHHHHHHHHHHhhcCC
Confidence 57999999999 56654 3 47899999999999998851 22333333333221 1123
Q ss_pred CCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhcc-CCCCcEEEEEEeecCCC
Q 042025 721 DTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYAS-LTGRKLFVWQARARDRV 799 (844)
Q Consensus 721 ~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s-~~~Rklyvh~T~AtDte 799 (844)
+.|++|+.||+|+..+.-+.... ..+..-.. .++... ..+..+..+.|||.| .
T Consensus 106 ~ipillvgNK~DL~~~~~R~~~~----------------------R~V~~~~~---~~la~~~~~~~~i~f~eTSAkd-~ 159 (331)
T 3r7w_B 106 SINIEVLIHKVDGLSEDFKVDAQ----------------------RDIMQRTG---EELLELGLDGVQVSFYLTSIFD-H 159 (331)
T ss_dssp TCEEEEECCCCCSSCSHHHHHHH----------------------HHHHHHHH---HTTSSSSCSCCCEEEECCCSSS-S
T ss_pred CCcEEEEEECcccCchhhhhhHH----------------------HHhhHHHH---HHHHhhcccccCceEEEeccCC-C
Confidence 78999999999996531000000 01111111 122211 012467888999998 5
Q ss_pred CHHHHHHHHHHHHhhh
Q 042025 800 TVDEAFKYIREVLKWD 815 (844)
Q Consensus 800 ~I~evF~~V~e~Ik~~ 815 (844)
+|.++|..|...|...
T Consensus 160 nV~eAFs~iv~~li~~ 175 (331)
T 3r7w_B 160 SIYEAFSRIVQKLIPE 175 (331)
T ss_dssp HHHHHHHHHHTTSSTT
T ss_pred cHHHHHHHHHHHHHhh
Confidence 8999999888766543
No 109
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=98.30 E-value=4e-06 Score=83.89 Aligned_cols=123 Identities=20% Similarity=0.198 Sum_probs=78.7
Q ss_pred ceEEEEEeCCCCCC----Ccc-----cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGMN----EGC-----KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~rs----eR~-----KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..+.+||+.|+ .. ++. .|..++..++++|||+|+++-. . .. +.+.+.++..+...
T Consensus 76 ~~~~l~DtpG~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~-------s-------~~-~~~~~~~~~~l~~~ 139 (228)
T 2qu8_A 76 NKYQIIDTPGL-LDRAFENRNTIEMTTITALAHINGVILFIIDISEQC-------G-------LT-IKEQINLFYSIKSV 139 (228)
T ss_dssp EEEEEEECTTT-TTSCGGGCCHHHHHHHHHHHTSSEEEEEEEETTCTT-------S-------SC-HHHHHHHHHHHHTC
T ss_pred CeEEEEECCCC-cCcccchhhhHHHHHHHHhhccccEEEEEEeccccc-------C-------cc-hHHHHHHHHHHHHh
Confidence 57999999999 33 332 2445678899999999998511 1 11 33445666666553
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
+.+.|+||++||+|+..++ .+. .+. .. ....|.... ++.+-++.|||.
T Consensus 140 --~~~~piilv~nK~Dl~~~~----~~~--------------------~~~-~~-~~~~~~~~~----~~~~~~~~~SA~ 187 (228)
T 2qu8_A 140 --FSNKSIVIGFNKIDKCNMD----SLS--------------------IDN-KL-LIKQILDNV----KNPIKFSSFSTL 187 (228)
T ss_dssp --C-CCCEEEEEECGGGCC------CCC--------------------HHH-HH-HHHHHHHHC----CSCEEEEECCTT
T ss_pred --hcCCcEEEEEeCcccCCch----hhH--------------------HHH-HH-HHHHHHHhc----CCCceEEEEecc
Confidence 4578999999999997531 111 000 00 111222211 234678899999
Q ss_pred CCCCHHHHHHHHHHHHhhhh
Q 042025 797 DRVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 797 Dte~I~evF~~V~e~Ik~~~ 816 (844)
++.+|+++|++|.+.+....
T Consensus 188 ~g~gi~~l~~~l~~~i~~~~ 207 (228)
T 2qu8_A 188 TGVGVEQAKITACELLKNDQ 207 (228)
T ss_dssp TCTTHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999886543
No 110
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=97.59 E-value=1.1e-07 Score=92.82 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=74.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
+.+++||++|+ ...+..|..++.+++++|||+|+++-+. +.+....|-..+.. ...+.|++
T Consensus 78 ~~l~i~Dt~G~-~~~~~~~~~~~~~~d~iilv~D~~~~~s-----------------~~~~~~~~~~~l~~-~~~~~pii 138 (204)
T 3th5_A 78 VNLGLWDTAGQ-EDYDRLRPLSYPQTDVFLICFSLVSPAS-----------------FENVRAKWYPEVRH-HCPNTPII 138 (204)
Confidence 46789999999 7788899999999999999999986221 11222111112221 12278999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+.-....+ -+.... . -. .+++.. +.... ..+.++.|||.++.+|+++|
T Consensus 139 lv~NK~Dl~~~~~~~~~~------~~~~~~-~--v~---~~~~~~--------~~~~~--~~~~~~~vSA~~g~gi~~l~ 196 (204)
T 3th5_A 139 LVGTKLDLRDDKDTIEKL------KEKKLT-P--IT---YPQGLA--------MAKEI--GAVKYLECSALTQRGLKTVF 196 (204)
Confidence 999999997642110000 000000 0 00 111111 11100 11246789999999999999
Q ss_pred HHHHHHH
Q 042025 806 KYIREVL 812 (844)
Q Consensus 806 ~~V~e~I 812 (844)
++|.+.+
T Consensus 197 ~~l~~~i 203 (204)
T 3th5_A 197 DEAIRAV 203 (204)
Confidence 9998765
No 111
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=98.20 E-value=2.7e-06 Score=83.84 Aligned_cols=123 Identities=14% Similarity=0.099 Sum_probs=73.5
Q ss_pred ceEEEEEeCCCCCC---------CcccceeccCC---ccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMN---------EGCKWVEMFED---VRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rs---------eR~KW~~~Fed---V~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+.+||+.|.+.. .+..+..|+.. +++||||+|.++- . . .....+++.+
T Consensus 79 ~~~~l~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~v~d~~~~---~------------~---~~~~~~~~~l 140 (223)
T 4dhe_A 79 PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP---L------------T---ELDRRMIEWF 140 (223)
T ss_dssp CSEEEEECCCCCSSCCCSTHHHHHHHHHHHHHHHCTTEEEEEEEEETTSC---C------------C---HHHHHHHHHH
T ss_pred CcEEEEcCCCCCcccCChhhHHHHHHHHHHHHhcCcCcCEEEEEEeCCCC---C------------C---HHHHHHHHHH
Confidence 47899999996211 12333445554 7889999998751 0 1 1122333333
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
.. .+.|+||++||+|+....- .+...+.+...+...........+-++.+
T Consensus 141 ~~----~~~p~i~v~nK~Dl~~~~~--------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 190 (223)
T 4dhe_A 141 AP----TGKPIHSLLTKCDKLTRQE--------------------------SINALRATQKSLDAYRDAGYAGKLTVQLF 190 (223)
T ss_dssp GG----GCCCEEEEEECGGGSCHHH--------------------------HHHHHHHHHHHHHHHHHHTCCSCEEEEEE
T ss_pred Hh----cCCCEEEEEeccccCChhh--------------------------HHHHHHHHHHHHHhhhhcccCCCCeEEEe
Confidence 33 4689999999999975311 11122223333322211011245678899
Q ss_pred eecCCCCHHHHHHHHHHHHhhhh
Q 042025 794 RARDRVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~Ik~~~ 816 (844)
||.++.+|++.|++|.+.+....
T Consensus 191 SA~~g~gv~~l~~~l~~~~~~~~ 213 (223)
T 4dhe_A 191 SALKRTGLDDAHALIESWLRPAA 213 (223)
T ss_dssp BTTTTBSHHHHHHHHHHHHC---
T ss_pred ecCCCcCHHHHHHHHHHhcCccC
Confidence 99999999999999999885443
No 112
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=98.19 E-value=9.6e-06 Score=86.13 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=75.3
Q ss_pred ceEEEEEeCCCCCCC-----cccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCC
Q 042025 646 TKYQLIRVNAKGMNE-----GCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFK 720 (844)
Q Consensus 646 ~~~~liDVGGQ~rse-----R~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~ 720 (844)
.++++||++|| ... +..|..+|.+++++|||+|+++-. ....+..-...+..+... ..
T Consensus 52 ~~l~i~Dt~G~-~~~~~~~~~~~~~~~~~~ad~vi~V~D~t~~~--------------s~~~l~~~~~~l~~l~~~--~~ 114 (307)
T 3r7w_A 52 MTLNLWDCGGQ-DVFMENYFTKQKDHIFQMVQVLIHVFDVESTE--------------VLKDIEIFAKALKQLRKY--SP 114 (307)
T ss_dssp EEEEEEEECCS-HHHHHHHHTTTHHHHHTTCSEEEEEEETTCSC--------------HHHHHHHHHHHHHHHHHH--CT
T ss_pred eEEEEEECCCc-HHHhhhhhhhHHHHHhccCCEEEEEEECCChh--------------hHHHHHHHHHHHHHHHHh--CC
Confidence 68999999999 665 678999999999999999998511 011222222233333322 34
Q ss_pred CCcEEEEecccchhhh--hhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC
Q 042025 721 DTPFVLILNKYDLFEE--KVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 721 ~tpiILfLNK~DLfee--KI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt 798 (844)
+.|++|++||+|+..+ +....... .+.+.+ +.. ...--.+.++.|||.+
T Consensus 115 ~~piilv~NK~Dl~~~~~r~~~~~v~--------------------~~~~~~-----~~~---~~g~~~~~~~~tSa~~- 165 (307)
T 3r7w_A 115 DAKIFVLLHKMDLVQLDKREELFQIM--------------------MKNLSE-----TSS---EFGFPNLIGFPTSIWD- 165 (307)
T ss_dssp TCEEEEEEECGGGSCHHHHHHHHHHH--------------------HHHHHH-----HHH---TTTCCSCEEEECCTTS-
T ss_pred CCeEEEEEecccccchhhhhHHHHHH--------------------HHHHHH-----HHH---HcCCCCeEEEEeeecC-
Confidence 6899999999999762 11000000 111111 111 1100136788999999
Q ss_pred CCHHHHHHHHHHHH
Q 042025 799 VTVDEAFKYIREVL 812 (844)
Q Consensus 799 e~I~evF~~V~e~I 812 (844)
.++.++|..+...+
T Consensus 166 ~~i~e~~~~iv~~l 179 (307)
T 3r7w_A 166 ESLYKAWSQIVCSL 179 (307)
T ss_dssp SHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHH
Confidence 89999998877644
No 113
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=98.19 E-value=1.1e-05 Score=85.69 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=70.9
Q ss_pred eEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEE
Q 042025 647 KYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVL 726 (844)
Q Consensus 647 ~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiIL 726 (844)
++++||+ | ...+..|..||.++|++|+|+|+++- +. ..+.+..-+... .. .+.|+||
T Consensus 64 ~~~iwD~--q-er~~~l~~~~~~~ad~vilV~D~~~~-------~~------s~~~l~~~l~~~----~~---~~~piil 120 (301)
T 1u0l_A 64 SGVIENV--L-HRKNLLTKPHVANVDQVILVVTVKMP-------ET------STYIIDKFLVLA----EK---NELETVM 120 (301)
T ss_dssp SEEEEEE--C-CCSCEETTTTEESCCEEEEEECSSTT-------CC------CHHHHHHHHHHH----HH---TTCEEEE
T ss_pred eEEEEEE--c-cccceeeccccccCCEEEEEEeCCCC-------CC------CHHHHHHHHHHH----HH---CCCCEEE
Confidence 6889999 7 67788999999999999999999861 11 022222222222 21 3789999
Q ss_pred EecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHH
Q 042025 727 ILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFK 806 (844)
Q Consensus 727 fLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~ 806 (844)
++||+||..+.- ++++.++. ..+. .. +.++.|||.++.+|+++|.
T Consensus 121 v~NK~DL~~~~~--------------------------v~~~~~~~-----~~~~---~~-~~~~~~SAktg~gv~~lf~ 165 (301)
T 1u0l_A 121 VINKMDLYDEDD--------------------------LRKVRELE-----EIYS---GL-YPIVKTSAKTGMGIEELKE 165 (301)
T ss_dssp EECCGGGCCHHH--------------------------HHHHHHHH-----HHHT---TT-SCEEECCTTTCTTHHHHHH
T ss_pred EEeHHHcCCchh--------------------------HHHHHHHH-----HHHh---hh-CcEEEEECCCCcCHHHHHH
Confidence 999999864310 11222222 2221 12 4578899999999999998
Q ss_pred HHHH
Q 042025 807 YIRE 810 (844)
Q Consensus 807 ~V~e 810 (844)
++..
T Consensus 166 ~l~g 169 (301)
T 1u0l_A 166 YLKG 169 (301)
T ss_dssp HHSS
T ss_pred HhcC
Confidence 8753
No 114
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=98.17 E-value=2e-05 Score=76.92 Aligned_cols=117 Identities=15% Similarity=0.111 Sum_probs=78.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
+.+++||++|+ ...+..|..++.+++++|||+|+++.. .+.+....+..+... .-.+.|++
T Consensus 54 ~~~~i~Dt~g~-~~~~~~~~~~~~~~~~~i~v~d~~~~~-----------------s~~~~~~~~~~~~~~-~~~~~~i~ 114 (199)
T 2f9l_A 54 IKAQIWDTAGQ-ERYRRITSAYYRGAVGALLVYDIAKHL-----------------TYENVERWLKELRDH-ADSNIVIM 114 (199)
T ss_dssp EEEEEEECSSG-GGTTCCCHHHHTTCSEEEEEEETTCHH-----------------HHHTHHHHHHHHHHH-SCTTCEEE
T ss_pred EEEEEEECCCc-hhhhhhhHHHHhcCCEEEEEEECcCHH-----------------HHHHHHHHHHHHHHh-cCCCCeEE
Confidence 57889999999 677888999999999999999987521 122222333333221 12468999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
+++||.|+...+ ... .+.|..+.. . ..+.+..|+|+|+.+++++|
T Consensus 115 ~v~nK~Dl~~~~----~~~--------------------~~~a~~l~~--------~---~~~~~~d~Sal~~~~i~~l~ 159 (199)
T 2f9l_A 115 LVGNKSDLRHLR----AVP--------------------TDEARAFAE--------K---NNLSFIETSALDSTNVEEAF 159 (199)
T ss_dssp EEEECTTCGGGC----CSC--------------------HHHHHHHHH--------H---TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccc----CcC--------------------HHHHHHHHH--------H---cCCeEEEEeCCCCCCHHHHH
Confidence 999999986531 000 233333221 1 12344559999999999999
Q ss_pred HHHHHHHhhhh
Q 042025 806 KYIREVLKWDD 816 (844)
Q Consensus 806 ~~V~e~Ik~~~ 816 (844)
++|.+.+....
T Consensus 160 ~~l~~~~~~~~ 170 (199)
T 2f9l_A 160 KNILTEIYRIV 170 (199)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999886544
No 115
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=98.16 E-value=1e-05 Score=79.07 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=75.9
Q ss_pred ceEEEEEeCCCCCC-CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 646 TKYQLIRVNAKGMN-EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rs-eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..+.+||+.|+ .. ++..|..|+..++++|+|.|+++ ...+.....++..+.....-.+.|+
T Consensus 56 ~~l~~~Dt~~~-~~~~~~~~~~~~~~~~~~i~v~dv~~-----------------~~s~~~~~~~~~~l~~~~~~~~~pi 117 (192)
T 2cjw_A 56 ATIILLDMWEN-KGENEWLHDHCMQVGDAYLIVYSITD-----------------RASFEKASELRIQLRRARQTEDIPI 117 (192)
T ss_dssp EEEEEECCCCC-----CTTGGGHHHHCSEEEEEEETTC-----------------HHHHHHHHHHHHHHHHHTTTSCCCE
T ss_pred EEEEEEEeccC-cchhhhHHHhhcccCCEEEEEEECCC-----------------HHHHHHHHHHHHHHHHhhCCCCCeE
Confidence 45778999888 44 56677778899999999999885 2334444444444443222347899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||+.||.|+..++ .+. .+++.. +.... .+.++.|||.++.+|+++
T Consensus 118 ilV~NK~Dl~~~r----~v~--------------------~~~~~~-----~a~~~------~~~~~e~SA~~g~~v~~l 162 (192)
T 2cjw_A 118 ILVGNKSDLVRXR----EVS--------------------VSEGRA-----XAVVF------DXKFIETSAAVQHNVKEL 162 (192)
T ss_dssp EEEEECTTCGGGC----CSC--------------------HHHHHH-----HHHHT------TCEEEECBTTTTBSHHHH
T ss_pred EEEEechhhhccc----ccc--------------------HHHHHH-----HHHHh------CCceEEeccccCCCHHHH
Confidence 9999999986431 111 122211 11111 234678999999999999
Q ss_pred HHHHHHHHhhh
Q 042025 805 FKYIREVLKWD 815 (844)
Q Consensus 805 F~~V~e~Ik~~ 815 (844)
|+++.+.+...
T Consensus 163 f~~l~~~~~~~ 173 (192)
T 2cjw_A 163 FEGIVRQVRLR 173 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999887543
No 116
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=98.14 E-value=2.9e-06 Score=87.48 Aligned_cols=109 Identities=19% Similarity=0.164 Sum_probs=68.2
Q ss_pred eCCCCCCCcccceeccC---------------------CccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHH
Q 042025 653 VNAKGMNEGCKWVEMFE---------------------DVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFE 711 (844)
Q Consensus 653 VGGQ~rseR~KW~~~Fe---------------------dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFe 711 (844)
..|| ...+..|..+|. +++++|||+|+++-. ...+......+.
T Consensus 125 ~~g~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vilV~D~t~~~---------------~~s~~~~~~~l~ 188 (255)
T 3c5h_A 125 RAAA-TKLASAEKLMYFCTDQLGLEQDFEQKQMPDGKLLVDGFLLGIDVSRGM---------------NRNFDDQLKFVS 188 (255)
T ss_dssp HHTC-SEEECTTCBCCCCGGGTTCGGGSCCCBCGGGEEECCEEEEEEECBC-------------------CHHHHHHHHH
T ss_pred cchh-hhhhhhhhhhhhccccccccccccccccccccccCCEEEEEEECCCCc---------------hhhHHHHHHHHH
Confidence 5677 566778888887 799999999998510 012222233333
Q ss_pred HHHcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 042025 712 MMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVW 791 (844)
Q Consensus 712 sI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh 791 (844)
.+.......+.|+||++||.|+..++- ++++.+ |... ...+.++
T Consensus 189 ~i~~~~~~~~~piilV~NK~Dl~~~~~--------------------------v~~~~~-----~~~~-----~~~~~~~ 232 (255)
T 3c5h_A 189 NLYNQLAKTKKPIVVVLTKCDEGVERY--------------------------IRDAHT-----FALS-----KKNLQVV 232 (255)
T ss_dssp HHHHHHHHTTCCEEEEEECGGGBCHHH--------------------------HHHHHH-----HHHT-----SSSCCEE
T ss_pred HHHHHhccCCCCEEEEEEcccccccHH--------------------------HHHHHH-----HHHh-----cCCCeEE
Confidence 333321123689999999999854310 112211 1111 1134577
Q ss_pred EEeecCCCCHHHHHHHHHHHHh
Q 042025 792 QARARDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 792 ~T~AtDte~I~evF~~V~e~Ik 813 (844)
.|||.++.+|+++|++|.+.+.
T Consensus 233 e~SAk~g~gv~elf~~l~~~l~ 254 (255)
T 3c5h_A 233 ETSARSNVNVDLAFSTLVQLID 254 (255)
T ss_dssp ECBTTTTBSHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHhc
Confidence 8999999999999999988764
No 117
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=98.12 E-value=2.4e-06 Score=81.43 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=69.2
Q ss_pred eEEEEEeCCCC---------CCCcccceeccCCc---cEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHH
Q 042025 647 KYQLIRVNAKG---------MNEGCKWVEMFEDV---RVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMI 714 (844)
Q Consensus 647 ~~~liDVGGQ~---------rseR~KW~~~FedV---~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~ 714 (844)
++.+||+.|-+ ...+..|..++.+. ++|+||+|.++.. ..... .+++.+-
T Consensus 69 ~~~i~Dt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~d~~~~~---------------~~~~~---~~~~~~~ 130 (195)
T 3pqc_A 69 KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPP---------------QDSDL---MMVEWMK 130 (195)
T ss_dssp TEEEEECCCBSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEETTSCC---------------CHHHH---HHHHHHH
T ss_pred cEEEEECCCCccccCChhhHHHHHHHHHHHHhcCcCceEEEEEecCCCCC---------------CHHHH---HHHHHHH
Confidence 57899999921 23344555666654 9999999987411 11111 1222222
Q ss_pred cCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEe
Q 042025 715 RHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQAR 794 (844)
Q Consensus 715 n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~ 794 (844)
.. +.|++|++||.|+..+.- .+...+.+...+.. ...+.++.||
T Consensus 131 ~~----~~p~i~v~nK~Dl~~~~~--------------------------~~~~~~~~~~~~~~------~~~~~~~~~S 174 (195)
T 3pqc_A 131 SL----NIPFTIVLTKMDKVKMSE--------------------------RAKKLEEHRKVFSK------YGEYTIIPTS 174 (195)
T ss_dssp HT----TCCEEEEEECGGGSCGGG--------------------------HHHHHHHHHHHHHS------SCCSCEEECC
T ss_pred Hc----CCCEEEEEEChhcCChHH--------------------------HHHHHHHHHHHHhh------cCCCceEEEe
Confidence 11 689999999999974310 11112222222211 1235588899
Q ss_pred ecCCCCHHHHHHHHHHHHhh
Q 042025 795 ARDRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 795 AtDte~I~evF~~V~e~Ik~ 814 (844)
|.++.+|+++|+||.+.+..
T Consensus 175 a~~~~gv~~l~~~l~~~l~~ 194 (195)
T 3pqc_A 175 SVTGEGISELLDLISTLLKE 194 (195)
T ss_dssp TTTCTTHHHHHHHHHHHHC-
T ss_pred cCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999988753
No 118
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=98.09 E-value=6.2e-06 Score=79.16 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=71.2
Q ss_pred eEEEEEeCC----------CCCCCcccceeccCCc---cEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 647 KYQLIRVNA----------KGMNEGCKWVEMFEDV---RVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 647 ~~~liDVGG----------Q~rseR~KW~~~FedV---~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
++.+||+.| + ...+..|..++.+. +++|||+|.++-. .. +...+++.+
T Consensus 70 ~~~l~Dt~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----------------~~--~~~~~~~~~ 130 (195)
T 1svi_A 70 ELHFVDVPGYGFAKVSKSER-EAWGRMIETYITTREELKAVVQIVDLRHAP----------------SN--DDVQMYEFL 130 (195)
T ss_dssp TEEEEECCCBCCCSSCHHHH-HHHHHHHHHHHHHCTTEEEEEEEEETTSCC----------------CH--HHHHHHHHH
T ss_pred cEEEEECCCCCccccCHHHH-HHHHHHHHHHHhhhhcCCEEEEEEECCCCC----------------CH--HHHHHHHHH
Confidence 588999999 4 33344566777665 9999999988511 00 112223322
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
-. .+.|++|++||.|+..+. . .+...+-+...+ . ....+.++.+
T Consensus 131 ~~----~~~p~i~v~nK~Dl~~~~----~----------------------~~~~~~~~~~~~---~---~~~~~~~~~~ 174 (195)
T 1svi_A 131 KY----YGIPVIVIATKADKIPKG----K----------------------WDKHAKVVRQTL---N---IDPEDELILF 174 (195)
T ss_dssp HH----TTCCEEEEEECGGGSCGG----G----------------------HHHHHHHHHHHH---T---CCTTSEEEEC
T ss_pred HH----cCCCEEEEEECcccCChH----H----------------------HHHHHHHHHHHH---c---ccCCCceEEE
Confidence 22 468999999999997531 0 111112222222 1 1234568899
Q ss_pred eecCCCCHHHHHHHHHHHHh
Q 042025 794 RARDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~Ik 813 (844)
||.++.+|+++|++|.+.+.
T Consensus 175 Sa~~~~gv~~l~~~l~~~l~ 194 (195)
T 1svi_A 175 SSETKKGKDEAWGAIKKMIN 194 (195)
T ss_dssp CTTTCTTHHHHHHHHHHHHT
T ss_pred EccCCCCHHHHHHHHHHHhc
Confidence 99999999999999988764
No 119
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=98.06 E-value=3.6e-06 Score=77.83 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=69.1
Q ss_pred ceEEEEEeCCCCCC-------CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC
Q 042025 646 TKYQLIRVNAKGMN-------EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC 718 (844)
Q Consensus 646 ~~~~liDVGGQ~rs-------eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~ 718 (844)
..+.+||+.|+ .. .+..|..++.+++++|||+|.++-. .... ..+..++..
T Consensus 49 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----------------~~~~---~~~~~~~~~-- 106 (161)
T 2dyk_A 49 GRFLLVDTGGL-WSGDKWEKKIQEKVDRALEDAEVVLFAVDGRAEL----------------TQAD---YEVAEYLRR-- 106 (161)
T ss_dssp EEEEEEECGGG-CSSSSCCHHHHHHHHHHTTTCSEEEEEEESSSCC----------------CHHH---HHHHHHHHH--
T ss_pred ceEEEEECCCC-CCccchHHHHHHHHHHHHHhCCEEEEEEECCCcc----------------cHhH---HHHHHHHHh--
Confidence 46899999999 44 2456778899999999999988510 1111 112222222
Q ss_pred CCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC
Q 042025 719 FKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 719 f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt 798 (844)
.+.|++|++||.|+..++ ..+. + |..+. . . .++.|||.++
T Consensus 107 -~~~p~ilv~nK~Dl~~~~---~~~~-------------------------~-----~~~~~--~--~--~~~~~Sa~~~ 146 (161)
T 2dyk_A 107 -KGKPVILVATKVDDPKHE---LYLG-------------------------P-----LYGLG--F--G--DPIPTSSEHA 146 (161)
T ss_dssp -HTCCEEEEEECCCSGGGG---GGCG-------------------------G-----GGGGS--S--C--SCEECBTTTT
T ss_pred -cCCCEEEEEECcccccch---HhHH-------------------------H-----HHhCC--C--C--CeEEEecccC
Confidence 468999999999997641 0000 0 11111 0 1 2578999999
Q ss_pred CCHHHHHHHHHHHH
Q 042025 799 VTVDEAFKYIREVL 812 (844)
Q Consensus 799 e~I~evF~~V~e~I 812 (844)
.+|+++|+++.+.|
T Consensus 147 ~gv~~l~~~l~~~l 160 (161)
T 2dyk_A 147 RGLEELLEAIWERL 160 (161)
T ss_dssp BSHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHhC
Confidence 99999999998764
No 120
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=97.99 E-value=7.2e-05 Score=72.85 Aligned_cols=113 Identities=14% Similarity=0.116 Sum_probs=74.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
+.+++||+.|+ ...+..|..+|.+++++|+|+|+++.. .+......+..+-.. .-.+.|++
T Consensus 78 ~~~~i~Dt~g~-~~~~~~~~~~~~~~~~~i~v~d~~~~~-----------------s~~~~~~~~~~~~~~-~~~~~~i~ 138 (191)
T 1oix_A 78 IKAQIWDTAGL-ERYRAITSAYYRGAVGALLVYDIAKHL-----------------TYENVERWLKELRDH-ADSNIVIM 138 (191)
T ss_dssp EEEEEEEECSC-CSSSCCCHHHHTTCCEEEEEEETTCHH-----------------HHHTHHHHHHHHHHH-SCTTCEEE
T ss_pred EEEEEEECCCC-cchhhhhHHHhhcCCEEEEEEECcCHH-----------------HHHHHHHHHHHHHHh-cCCCCcEE
Confidence 46778999999 677888999999999999999987522 111112223332221 12467999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
+++||.|+...+ .. . .+.|..+.. . ..+.+..|+|+|+.+++++|
T Consensus 139 ~v~nK~Dl~~~~----~~----------------~----~~~a~~l~~--------~---~~~~~ld~Sald~~~v~~l~ 183 (191)
T 1oix_A 139 LVGNKSDLRHLR----AV----------------P----TDEARAFAE--------K---NGLSFIETSALDSTNVEAAF 183 (191)
T ss_dssp EEEECGGGGGGC----CS----------------C----HHHHHHHHH--------H---TTCEEEECCTTTCTTHHHHH
T ss_pred EEEECccccccc----cc----------------C----HHHHHHHHH--------H---cCCEEEEEeCCCCCCHHHHH
Confidence 999999986531 00 0 233333221 1 12345559999999999999
Q ss_pred HHHHHHH
Q 042025 806 KYIREVL 812 (844)
Q Consensus 806 ~~V~e~I 812 (844)
++|.+.|
T Consensus 184 ~~l~~~i 190 (191)
T 1oix_A 184 QTILTEI 190 (191)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 121
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=97.98 E-value=1.4e-05 Score=77.07 Aligned_cols=122 Identities=9% Similarity=-0.009 Sum_probs=75.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+++||++|+ ...+..|..++.+.+++|+|+|+++-. ..+......+..+... ..+.|+|
T Consensus 56 ~~~~i~Dt~G~-~~~~~~~~~~~~~~~~~i~v~d~~~~~----------------~s~~~~~~~~~~~~~~--~~~~pii 116 (184)
T 2zej_A 56 LVLNVWDFAGR-EEFYSTHPHFMTQRALYLAVYDLSKGQ----------------AEVDAMKPWLFNIKAR--ASSSPVI 116 (184)
T ss_dssp CEEEEEEECSH-HHHHTTSHHHHHHSEEEEEEEEGGGCH----------------HHHHTHHHHHHHHHHH--CTTCEEE
T ss_pred eEEEEEecCCC-HHHHHhhHHHccCCcEEEEEEeCCcch----------------hHHHHHHHHHHHHHhh--CCCCcEE
Confidence 57899999999 667778888999999999999998611 1122222333333322 1368999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCC-CHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRV-TVDEA 804 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte-~I~ev 804 (844)
|+.||.|+..++. + .....-+...|..... . .....++.|||.++. ++++.
T Consensus 117 lv~nK~Dl~~~~~----~----------------------~~~~~~~~~~~~~~~~-~-~~~~~~~~~Sa~~~~~~~~~l 168 (184)
T 2zej_A 117 LVGTHLDVSDEKQ----R----------------------KACMSKITKELLNKRG-F-PAIRDYHFVNATEESDALAKL 168 (184)
T ss_dssp EEEECGGGCCHHH----H----------------------HHHHHHHHHHTTTCTT-S-CEEEEEEECCTTSCCHHHHHH
T ss_pred EEEECCCcccchh----h----------------------HHHHHHHHHHHHHhcC-C-cchhheEEEecccCchhHHHH
Confidence 9999999865421 0 0000011112211110 0 111236789999996 88888
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
++.|.+.+..
T Consensus 169 ~~~i~~~~~~ 178 (184)
T 2zej_A 169 RKTIINESLN 178 (184)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 8888777654
No 122
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=97.93 E-value=2.3e-05 Score=75.16 Aligned_cols=108 Identities=19% Similarity=0.283 Sum_probs=68.5
Q ss_pred ceEEEEEeCCCCCCCc---------ccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGMNEG---------CKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR---------~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..+++||+.|+ .... +.| .++.+++++|||+|.++.. . .. ...+++.+...
T Consensus 52 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~-~~~~~ad~~i~v~D~~~~~-------s-------~~----~~~~~~~~~~~ 111 (172)
T 2gj8_A 52 MPLHIIDTAGL-REASDEVERIGIERAW-QEIEQADRVLFMVDGTTTD-------A-------VD----PAEIWPEFIAR 111 (172)
T ss_dssp EEEEEEECCCC-SCCSSHHHHHHHHHHH-HHHHTCSEEEEEEETTTCC-------C-------CS----HHHHCHHHHHH
T ss_pred eEEEEEECCCc-ccchhHHHHHHHHHHH-HHHHhCCEEEEEEECCCCC-------C-------HH----HHHHHHHHHHh
Confidence 35889999998 4321 123 3578999999999998621 1 11 11333333332
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
...+.|+||++||+|+..+. .. + ... ..+.++.|||+
T Consensus 112 -~~~~~p~ilv~NK~Dl~~~~-----~~-------~------------------------~~~------~~~~~~~~SA~ 148 (172)
T 2gj8_A 112 -LPAKLPITVVRNKADITGET-----LG-------M------------------------SEV------NGHALIRLSAR 148 (172)
T ss_dssp -SCTTCCEEEEEECHHHHCCC-----CE-------E------------------------EEE------TTEEEEECCTT
T ss_pred -cccCCCEEEEEECccCCcch-----hh-------h------------------------hhc------cCCceEEEeCC
Confidence 12468999999999985421 00 0 000 13457889999
Q ss_pred CCCCHHHHHHHHHHHHhhhh
Q 042025 797 DRVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 797 Dte~I~evF~~V~e~Ik~~~ 816 (844)
++.+|+++|++|.+.+....
T Consensus 149 ~g~gv~~l~~~l~~~~~~~~ 168 (172)
T 2gj8_A 149 TGEGVDVLRNHLKQSMGFDT 168 (172)
T ss_dssp TCTTHHHHHHHHHHHC----
T ss_pred CCCCHHHHHHHHHHHhhhcc
Confidence 99999999999998876554
No 123
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=97.89 E-value=3e-05 Score=73.35 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=69.2
Q ss_pred ceEEEEEeCCCCCCCcccc------eeccC--CccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEGCKW------VEMFE--DVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW------~~~Fe--dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+++||+.|+ ...+..| ..|+. +++++++|+|.+++++ + ..++..+..
T Consensus 50 ~~l~i~Dt~G~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~-----------------~---~~~~~~~~~-- 106 (165)
T 2wji_A 50 EKFKVVDLPGV-YSLTANSIDEIIARDYIINEKPDLVVNIVDATALER-----------------N---LYLTLQLME-- 106 (165)
T ss_dssp EEEEEEECCCC-SCSSSSSHHHHHHHHHHHHHCCSEEEEEEETTCHHH-----------------H---HHHHHHHHH--
T ss_pred cEEEEEECCCc-ccCCCcchhHHHHHHHHhcCCCCEEEEEecCCchhH-----------------h---HHHHHHHHh--
Confidence 46889999999 5554333 45664 8999999999875321 1 123333333
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|+||++||.|+..++ .+.. . .+. +..++ + +.++.|||.+
T Consensus 107 --~~~p~ilv~nK~Dl~~~~----~~~~--------------~----~~~----~~~~~--------~--~~~~~~SA~~ 148 (165)
T 2wji_A 107 --MGANLLLALNKMDLAKSL----GIEI--------------D----VDK----LEKIL--------G--VKVVPLSAAK 148 (165)
T ss_dssp --TTCCEEEEEECHHHHHHT----TCCC--------------C----HHH----HHHHH--------T--SCEEECBGGG
T ss_pred --cCCCEEEEEEchHhcccc----Chhh--------------H----HHH----HHHHh--------C--CCEEEEEcCC
Confidence 268999999999987542 1110 0 111 11111 1 2367899999
Q ss_pred CCCHHHHHHHHHHHH
Q 042025 798 RVTVDEAFKYIREVL 812 (844)
Q Consensus 798 te~I~evF~~V~e~I 812 (844)
+.+|+++|+++.+.+
T Consensus 149 ~~~v~~l~~~l~~~~ 163 (165)
T 2wji_A 149 KMGIEELKKAISIAV 163 (165)
T ss_dssp TBSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHh
Confidence 999999999998776
No 124
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=97.88 E-value=6.5e-05 Score=71.61 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=72.4
Q ss_pred ceEEEEEeCCCCCCCc------ccceeccC--CccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEG------CKWVEMFE--DVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR------~KW~~~Fe--dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+.+||+.|+ ...+ ..|..++. +++++++|+|.+++++. ..++..+..
T Consensus 54 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--------------------~~~~~~~~~-- 110 (188)
T 2wjg_A 54 EKFKVVDLPGV-YSLTANSIDEIIARDYIINEKPDLVVNIVDATALERN--------------------LYLTLQLME-- 110 (188)
T ss_dssp EEEEEEECCCC-SCCSSSSHHHHHHHHHHHHHCCSEEEEEEEGGGHHHH--------------------HHHHHHHHT--
T ss_pred cEEEEEECCCc-CccccccHHHHHHHHHHhccCCCEEEEEecchhHHHH--------------------HHHHHHHHh--
Confidence 57999999999 4443 34666774 58999999998853221 223333333
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|+||++||.|+..++ .+.. . .+. +.+.+ .+-++.|||.+
T Consensus 111 --~~~piilv~nK~Dl~~~~----~~~~--------------~----~~~----~~~~~----------~~~~~~~Sa~~ 152 (188)
T 2wjg_A 111 --MGANLLLALNKMDLAKSL----GIEI--------------D----VDK----LEKIL----------GVKVVPLSAAK 152 (188)
T ss_dssp --TTCCEEEEEECHHHHHHT----TCCC--------------C----HHH----HHHHH----------TSCEEECBGGG
T ss_pred --cCCCEEEEEEhhhccccc----cchH--------------H----HHH----HHHHh----------CCCeEEEEecC
Confidence 368999999999997642 1110 0 111 11111 12367899999
Q ss_pred CCCHHHHHHHHHHHHhhhh
Q 042025 798 RVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 798 te~I~evF~~V~e~Ik~~~ 816 (844)
+.+|+++|+++.+.+....
T Consensus 153 ~~~v~~l~~~i~~~~~~~~ 171 (188)
T 2wjg_A 153 KMGIEELKKAISIAVKDKK 171 (188)
T ss_dssp TBSHHHHHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHHHHHhcc
Confidence 9999999999998886544
No 125
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=97.83 E-value=5.2e-06 Score=79.76 Aligned_cols=72 Identities=17% Similarity=0.273 Sum_probs=55.5
Q ss_pred eEEEEEeCCCCCCCcccceeccCC----ccEEEEEeecc-cccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC---
Q 042025 647 KYQLIRVNAKGMNEGCKWVEMFED----VRVVVFCVALS-DYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC--- 718 (844)
Q Consensus 647 ~~~liDVGGQ~rseR~KW~~~Fed----V~aIIFVVdLS-DYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~--- 718 (844)
.+.+||++|+ ...+..|..++.+ ++++|||+|.+ + ...+.+....+..++....
T Consensus 92 ~~~l~Dt~G~-~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~ 153 (193)
T 2ged_A 92 GVTLVDFPGH-VKLRYKLSDYLKTRAKFVKGLIFMVDSTVD-----------------PKKLTTTAEFLVDILSITESSC 153 (193)
T ss_dssp TCSEEEETTC-CBSSCCHHHHHHHHGGGEEEEEEEEETTCC-----------------HHHHHHHHHHHHHHHHHHHHHS
T ss_pred eEEEEECCCC-chHHHHHHHHHHhhcccCCEEEEEEECCCC-----------------chhHHHHHHHHHHHHhhhhhcc
Confidence 5779999999 7788899998876 89999999988 3 3445555666666665432
Q ss_pred CCCCcEEEEecccchhhh
Q 042025 719 FKDTPFVLILNKYDLFEE 736 (844)
Q Consensus 719 f~~tpiILfLNK~DLfee 736 (844)
-.+.|++|++||+|+..+
T Consensus 154 ~~~~p~ilv~nK~Dl~~~ 171 (193)
T 2ged_A 154 ENGIDILIACNKSELFTA 171 (193)
T ss_dssp TTCCCEEEEEECTTSTTC
T ss_pred ccCCCEEEEEEchHhcCC
Confidence 246899999999998753
No 126
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=97.83 E-value=3.6e-06 Score=80.11 Aligned_cols=129 Identities=17% Similarity=0.216 Sum_probs=70.8
Q ss_pred eEEEEEeCCCC----------CCCcccceeccCC----ccEEEEEeecccccccccC-CCCCCCcccccchHHHHHHHHH
Q 042025 647 KYQLIRVNAKG----------MNEGCKWVEMFED----VRVVVFCVALSDYDQMWIC-PESSGSGTLLQNKMIQSKELFE 711 (844)
Q Consensus 647 ~~~liDVGGQ~----------rseR~KW~~~Fed----V~aIIFVVdLSDYDq~l~~-~ED~g~~~~~~NRL~ESl~LFe 711 (844)
++.+||++|.. ...+..|..++.+ +..+++|+|.+.|+..... .+. ..+...+++++
T Consensus 45 ~~~l~Dt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~d~~s~~~~~~~~~~~--------~~~~~~~~~~~ 116 (190)
T 2cxx_A 45 NHKIIDMPGFGFMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKR--------GEIPIDVEFYQ 116 (190)
T ss_dssp TEEEEECCCBSCCTTSCHHHHHHHHHHHHHHHHHHGGGCCEEEEEEETTHHHHHHHHHHHT--------TCCCHHHHHHH
T ss_pred CEEEEECCCccccccCCHHHHHHHHHHHHHHHHhhhccCCEEEEEEcchhhhhHHHhhhcc--------CccHHHHHHHH
Confidence 36789999831 3344556666654 5577778877766443100 000 00001122333
Q ss_pred HHHcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEE
Q 042025 712 MMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVW 791 (844)
Q Consensus 712 sI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh 791 (844)
.+.. .+.|++|++||+|+..+. . +.+ +.+..++ .+. .......++
T Consensus 117 ~~~~----~~~piilv~nK~Dl~~~~------~---------------------~~~-~~~~~~~-~~~--~~~~~~~~~ 161 (190)
T 2cxx_A 117 FLRE----LDIPTIVAVNKLDKIKNV------Q---------------------EVI-NFLAEKF-EVP--LSEIDKVFI 161 (190)
T ss_dssp HHHH----TTCCEEEEEECGGGCSCH------H---------------------HHH-HHHHHHH-TCC--GGGHHHHEE
T ss_pred HHHh----cCCceEEEeehHhccCcH------H---------------------HHH-HHHHHHh-hhh--hhccCCcEE
Confidence 3322 368999999999987532 0 111 1122222 110 000012378
Q ss_pred EEeecCCCCHHHHHHHHHHHHhhhhhc
Q 042025 792 QARARDRVTVDEAFKYIREVLKWDDEK 818 (844)
Q Consensus 792 ~T~AtDte~I~evF~~V~e~Ik~~~~k 818 (844)
.|||.++.+|+++|+++.+.+.....+
T Consensus 162 ~~Sa~~~~~v~~l~~~l~~~~~~~~~~ 188 (190)
T 2cxx_A 162 PISAKFGDNIERLKNRIFEVIRERQGR 188 (190)
T ss_dssp ECCTTTCTTHHHHHHHHHHHHHHC---
T ss_pred EEecCCCCCHHHHHHHHHHhcchhhcc
Confidence 899999999999999999988655443
No 127
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=97.72 E-value=7e-06 Score=80.71 Aligned_cols=73 Identities=16% Similarity=0.276 Sum_probs=54.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCC----ccEEEEEeecc-cccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC--
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFED----VRVVVFCVALS-DYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC-- 718 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~Fed----V~aIIFVVdLS-DYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~-- 718 (844)
..+.+||++|+ ...+..|..++.+ ++++|||+|.+ + ...+.+....+..++....
T Consensus 55 ~~~~l~Dt~G~-~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 116 (218)
T 1nrj_B 55 SGVTLVDFPGH-VKLRYKLSDYLKTRAKFVKGLIFMVDSTVD-----------------PKKLTTTAEFLVDILSITESS 116 (218)
T ss_dssp SSCEEEECCCC-GGGTHHHHHHHHHHGGGEEEEEEEEETTSC-----------------TTCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCc-HHHHHHHHHHHHhccccCCEEEEEEECCCC-----------------hHHHHHHHHHHHHHHhccccc
Confidence 35889999999 7788889999987 89999999998 3 1223344455555555322
Q ss_pred -CCCCcEEEEecccchhhh
Q 042025 719 -FKDTPFVLILNKYDLFEE 736 (844)
Q Consensus 719 -f~~tpiILfLNK~DLfee 736 (844)
-.+.|++|++||+|+..+
T Consensus 117 ~~~~~p~ilv~nK~Dl~~~ 135 (218)
T 1nrj_B 117 CENGIDILIACNKSELFTA 135 (218)
T ss_dssp STTCCCEEEEEECTTSTTC
T ss_pred ccCCCCEEEEEEchHhccc
Confidence 257899999999999753
No 128
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=97.72 E-value=0.00011 Score=76.28 Aligned_cols=107 Identities=13% Similarity=0.165 Sum_probs=73.0
Q ss_pred ceEEEEEeCCCCCCCcccc------eecc--CCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEGCKW------VEMF--EDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW------~~~F--edV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+++||+.|+ ...+..| ..|+ .++++||+|+|.++.+ + .+.++..+...
T Consensus 52 ~~~~l~DtpG~-~~~~~~~~~e~v~~~~~~~~~~d~ii~V~D~t~~~-----------------~---~~~~~~~l~~~- 109 (258)
T 3a1s_A 52 YTINLIDLPGT-YSLGYSSIDEKIARDYLLKGDADLVILVADSVNPE-----------------Q---SLYLLLEILEM- 109 (258)
T ss_dssp EEEEEEECCCC-SSCCSSSHHHHHHHHHHHHSCCSEEEEEEETTSCH-----------------H---HHHHHHHHHTT-
T ss_pred eEEEEEECCCc-CccCCCCHHHHHHHHHHhhcCCCEEEEEeCCCchh-----------------h---HHHHHHHHHhc-
Confidence 57999999999 6666655 4455 6899999999988521 1 12344555442
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
+.|++|++||+|+..++ .+.. + .+. +.+++ + +-+..|||.+
T Consensus 110 ---~~pvilv~NK~Dl~~~~----~i~~--------------~----~~~----l~~~l--------g--~~vi~~SA~~ 150 (258)
T 3a1s_A 110 ---EKKVILAMTAIDEAKKT----GMKI--------------D----RYE----LQKHL--------G--IPVVFTSSVT 150 (258)
T ss_dssp ---TCCEEEEEECHHHHHHT----TCCB--------------C----HHH----HHHHH--------C--SCEEECCTTT
T ss_pred ---CCCEEEEEECcCCCCcc----chHH--------------H----HHH----HHHHc--------C--CCEEEEEeeC
Confidence 68999999999997642 1110 0 111 22111 1 2377899999
Q ss_pred CCCHHHHHHHHHHHHh
Q 042025 798 RVTVDEAFKYIREVLK 813 (844)
Q Consensus 798 te~I~evF~~V~e~Ik 813 (844)
+.||++.|+++.+.+.
T Consensus 151 g~gi~el~~~i~~~~~ 166 (258)
T 3a1s_A 151 GEGLEELKEKIVEYAQ 166 (258)
T ss_dssp CTTHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhh
Confidence 9999999999988764
No 129
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=97.71 E-value=7.9e-05 Score=81.98 Aligned_cols=118 Identities=13% Similarity=0.092 Sum_probs=77.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||+.|+ ....+.+..++..+|++|+|+|.++-. ......+-+.+.+.+ ...|+|
T Consensus 75 ~~~~iiDtPGh-~~~~~~~~~~~~~~D~~ilVvda~~~~--------------~~~qt~~~~~~~~~~------~~~~ii 133 (403)
T 3sjy_A 75 RRISFIDAPGH-EVLMATMLSGAALMDGAILVVAANEPF--------------PQPQTREHFVALGII------GVKNLI 133 (403)
T ss_dssp EEEEEEECCCC-GGGHHHHHHHHTTCSEEEEEEETTSCS--------------SCHHHHHHHHHHHHH------TCCCEE
T ss_pred ceEEEEECCCc-HHHHHHHHHHHhhCCEEEEEEECCCCC--------------CcHHHHHHHHHHHHc------CCCCEE
Confidence 47899999999 788888999999999999999988511 011122222222221 225899
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+....- .+...+.|...+... ....+-+..+||.++++|++.|
T Consensus 134 vviNK~Dl~~~~~--------------------------~~~~~~~i~~~l~~~----~~~~~~ii~vSA~~g~gi~~L~ 183 (403)
T 3sjy_A 134 IVQNKVDVVSKEE--------------------------ALSQYRQIKQFTKGT----WAENVPIIPVSALHKINIDSLI 183 (403)
T ss_dssp EEEECGGGSCHHH--------------------------HHHHHHHHHHHHTTS----TTTTCCEEECBTTTTBSHHHHH
T ss_pred EEEECccccchHH--------------------------HHHHHHHHHHHHHhh----CCCCCEEEEEECCCCcChHHHH
Confidence 9999999865310 112222233222211 1234568899999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 184 ~~l~~~l~~ 192 (403)
T 3sjy_A 184 EGIEEYIKT 192 (403)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHhCCC
Confidence 999987643
No 130
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=97.70 E-value=7.2e-05 Score=79.53 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=73.0
Q ss_pred ceEEEEEeCCCCCCCc----------ccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHc
Q 042025 646 TKYQLIRVNAKGMNEG----------CKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIR 715 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR----------~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n 715 (844)
..+.+||+.|+ ...+ ..|..++.++|+||||+|.++-.. .+...+|-..+.
T Consensus 59 ~~i~lvDTPG~-~~~~~~~~l~~~~~~~~~~~l~~aD~il~VvD~~~~~~------------------~~~~~~~~~~l~ 119 (308)
T 3iev_A 59 AQIIFLDTPGI-YEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWR------------------PRDEEIYQNFIK 119 (308)
T ss_dssp EEEEEEECCCC-CCCCTTCHHHHHHHHHHHHHHHHCSEEEEEEETTTBSC------------------HHHHHHHHHHTG
T ss_pred CeEEEEECcCC-CccccchhHHHHHHHHHHHHhhcCCEEEEEEeCCCCCC------------------chhHHHHHHHHH
Confidence 46889999999 4433 456678899999999999985111 112333223333
Q ss_pred CCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEee
Q 042025 716 HPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARA 795 (844)
Q Consensus 716 ~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~A 795 (844)
. .+.|+||++||+|+...+ .. .....+.+.. .. +....++.+||
T Consensus 120 ~---~~~pvilV~NK~Dl~~~~---~~----------------------~~~~~~~l~~----~~----~~~~~i~~vSA 163 (308)
T 3iev_A 120 P---LNKPVIVVINKIDKIGPA---KN----------------------VLPLIDEIHK----KH----PELTEIVPISA 163 (308)
T ss_dssp G---GCCCEEEEEECGGGSSSG---GG----------------------GHHHHHHHHH----HC----TTCCCEEECBT
T ss_pred h---cCCCEEEEEECccCCCCH---HH----------------------HHHHHHHHHH----hc----cCCCeEEEEeC
Confidence 2 368999999999986311 00 1111222222 21 12234788999
Q ss_pred cCCCCHHHHHHHHHHHHh
Q 042025 796 RDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 796 tDte~I~evF~~V~e~Ik 813 (844)
.++.||++.|+++.+.+.
T Consensus 164 ~~g~gv~~L~~~l~~~l~ 181 (308)
T 3iev_A 164 LKGANLDELVKTILKYLP 181 (308)
T ss_dssp TTTBSHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHhCc
Confidence 999999999999988763
No 131
>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}
Probab=97.68 E-value=3.2e-05 Score=88.04 Aligned_cols=114 Identities=9% Similarity=0.085 Sum_probs=72.9
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
..++.+||++|| ...+..|..++.+++++|+|+|+++++. +..-+..+.... .+.|+
T Consensus 97 ~~~~~i~Dt~G~-e~~~~~~~~~l~~~d~ii~V~D~s~~~~-----------------~~~~~~~l~~~~-----~~~pv 153 (535)
T 3dpu_A 97 ECLFHFWDFGGQ-EIMHASHQFFMTRSSVYMLLLDSRTDSN-----------------KHYWLRHIEKYG-----GKSPV 153 (535)
T ss_dssp TCEEEEECCCSC-CTTTTTCHHHHHSSEEEEEEECGGGGGG-----------------HHHHHHHHHHHS-----SSCCE
T ss_pred eEEEEEEECCcH-HHHHHHHHHHccCCcEEEEEEeCCCchh-----------------HHHHHHHHHHhC-----CCCCE
Confidence 368999999999 7778888889999999999999986321 122222222221 26899
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||+|+..++ .+. .+. +...+..+ .+-++.|||.++.||++.
T Consensus 154 ilV~NK~Dl~~~~----~v~--------------------~~~----~~~~~~~~-------~~~~~~vSA~~g~gi~eL 198 (535)
T 3dpu_A 154 IVVMNKIDENPSY----NIE--------------------QKK----INERFPAI-------ENRFHRISCKNGDGVESI 198 (535)
T ss_dssp EEEECCTTTCTTC----CCC--------------------HHH----HHHHCGGG-------TTCEEECCC-----CTTH
T ss_pred EEEEECCCccccc----ccC--------------------HHH----HHHHHHhc-------CCceEEEecCcccCHHHH
Confidence 9999999986531 010 122 11222221 123788999999999999
Q ss_pred HHHHHHHHhhhh
Q 042025 805 FKYIREVLKWDD 816 (844)
Q Consensus 805 F~~V~e~Ik~~~ 816 (844)
|++|.+.+....
T Consensus 199 ~~~l~~~~~~~~ 210 (535)
T 3dpu_A 199 AKSLKSAVLHPD 210 (535)
T ss_dssp HHHHHHHHTCTT
T ss_pred HHHHHHHHhccc
Confidence 999999886543
No 132
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=97.59 E-value=0.00013 Score=75.80 Aligned_cols=105 Identities=10% Similarity=0.101 Sum_probs=70.2
Q ss_pred ceEEEEEeCCCCCCCcc----------cceecc--CCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEGC----------KWVEMF--EDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~----------KW~~~F--edV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+.+||+.|+ ...+. .+..|+ .++++||||+|.++. ...+.+...+
T Consensus 48 ~~~~lvDtpG~-~~~~~~~~~~~~~e~i~~~~~~~~~~d~vi~VvDas~~--------------------~~~~~l~~~l 106 (256)
T 3iby_A 48 HLIEITDLPGV-YSLVANAEGISQDEQIAAQSVIDLEYDCIINVIDACHL--------------------ERHLYLTSQL 106 (256)
T ss_dssp EEEEEEECCCC-SSCC------CHHHHHHHHHHHHSCCSEEEEEEEGGGH--------------------HHHHHHHHHH
T ss_pred eEEEEEeCCCc-ccccccccCCCHHHHHHHHHHhhCCCCEEEEEeeCCCc--------------------hhHHHHHHHH
Confidence 47999999999 55543 355666 899999999998851 1122333333
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
... +.|++|++||+|+...+ .+.. + .+. +.+.+ .+-+..|
T Consensus 107 ~~~----~~pvilv~NK~Dl~~~~----~~~~--------------~----~~~----l~~~l----------g~~vi~~ 146 (256)
T 3iby_A 107 FEL----GKPVVVALNMMDIAEHR----GISI--------------D----TEK----LESLL----------GCSVIPI 146 (256)
T ss_dssp TTS----CSCEEEEEECHHHHHHT----TCEE--------------C----HHH----HHHHH----------CSCEEEC
T ss_pred HHc----CCCEEEEEEChhcCCcC----CcHH--------------H----HHH----HHHHc----------CCCEEEE
Confidence 332 68999999999998652 1110 0 111 22221 1237889
Q ss_pred eecCCCCHHHHHHHHHHH
Q 042025 794 RARDRVTVDEAFKYIREV 811 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~ 811 (844)
||.++.||++.|+++.+.
T Consensus 147 SA~~g~gi~el~~~i~~~ 164 (256)
T 3iby_A 147 QAHKNIGIPALQQSLLHC 164 (256)
T ss_dssp BGGGTBSHHHHHHHHHTC
T ss_pred ECCCCCCHHHHHHHHHhh
Confidence 999999999999998775
No 133
>3tr5_A RF-3, peptide chain release factor 3; protein synthesis, translation; HET: GDP; 2.11A {Coxiella burnetii}
Probab=97.58 E-value=0.00026 Score=81.29 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=52.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...+..|..++..+|++|+|+|.++-. ..+.+.+|..+.. .+.|+|
T Consensus 82 ~~i~liDTPG~-~df~~~~~~~l~~aD~allVvDa~~g~------------------~~~t~~~~~~~~~----~~iPii 138 (528)
T 3tr5_A 82 YLINLLDTPGH-ADFTEDTYRTLTAVDSALMVIDAAKGV------------------EPRTIKLMEVCRL----RHTPIM 138 (528)
T ss_dssp EEEEEECCCCS-TTCCHHHHHGGGGCSEEEEEEETTTCS------------------CHHHHHHHHHHHT----TTCCEE
T ss_pred EEEEEEECCCc-hhHHHHHHHHHHhCCEEEEEEeCCCCC------------------CHHHHHHHHHHHH----cCCCEE
Confidence 57999999999 788889999999999999999998511 1234556655544 268999
Q ss_pred EEecccchhh
Q 042025 726 LILNKYDLFE 735 (844)
Q Consensus 726 LfLNK~DLfe 735 (844)
+|+||+|+..
T Consensus 139 vviNK~Dl~~ 148 (528)
T 3tr5_A 139 TFINKMDRDT 148 (528)
T ss_dssp EEEECTTSCC
T ss_pred EEEeCCCCcc
Confidence 9999999863
No 134
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=97.56 E-value=0.00042 Score=71.67 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=73.7
Q ss_pred ceEEEEEeCCCCCCCcc------cceecc--CCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEGC------KWVEMF--EDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~------KW~~~F--edV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+.+||+.|+ ...+. .|..|+ .++++||||+|.++. ...+.++..+...
T Consensus 50 ~~~~l~DtpG~-~~~~~~~~~~~~~~~~~~~~~~d~vi~v~D~~~~--------------------~~~~~~~~~~~~~- 107 (271)
T 3k53_A 50 KEFLVVDLPGI-YSLTAHSIDELIARNFILDGNADVIVDIVDSTCL--------------------MRNLFLTLELFEM- 107 (271)
T ss_dssp EEEEEEECCCC-SCCCSSCHHHHHHHHHHHTTCCSEEEEEEEGGGH--------------------HHHHHHHHHHHHT-
T ss_pred ceEEEEeCCCc-cccccCCHHHHHHHHhhhccCCcEEEEEecCCcc--------------------hhhHHHHHHHHhc-
Confidence 46999999999 55444 466666 789999999998852 1233444555543
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
...|++|++||+|+...+- ... + .+. +..++ + +-+..|||.+
T Consensus 108 --~~~p~ilv~NK~Dl~~~~~----~~~--------------~----~~~----l~~~l--------g--~~~~~~Sa~~ 149 (271)
T 3k53_A 108 --EVKNIILVLNKFDLLKKKG----AKI--------------D----IKK----MRKEL--------G--VPVIPTNAKK 149 (271)
T ss_dssp --TCCSEEEEEECHHHHHHHT----CCC--------------C----HHH----HHHHH--------S--SCEEECBGGG
T ss_pred --CCCCEEEEEEChhcCcccc----cHH--------------H----HHH----HHHHc--------C--CcEEEEEeCC
Confidence 2389999999999976421 110 0 111 22221 1 2367899999
Q ss_pred CCCHHHHHHHHHHHHhh
Q 042025 798 RVTVDEAFKYIREVLKW 814 (844)
Q Consensus 798 te~I~evF~~V~e~Ik~ 814 (844)
+.+|++.|+++.+.+..
T Consensus 150 g~gi~~l~~~i~~~~~~ 166 (271)
T 3k53_A 150 GEGVEELKRMIALMAEG 166 (271)
T ss_dssp TBTHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 99999999999988754
No 135
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=97.52 E-value=5.2e-05 Score=84.78 Aligned_cols=119 Identities=10% Similarity=0.085 Sum_probs=76.5
Q ss_pred ceEEEEEeCCCC---------CCCcccc-eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHc
Q 042025 646 TKYQLIRVNAKG---------MNEGCKW-VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIR 715 (844)
Q Consensus 646 ~~~~liDVGGQ~---------rseR~KW-~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n 715 (844)
.++++||+.|.+ ...+..+ ..+++.++++|+|+|.++- .. .....++..+..
T Consensus 243 ~~~~l~DT~G~~~~~~~~~~~e~~~~~~~~~~~~~ad~~llviD~~~~---------------~~---~~~~~~~~~~~~ 304 (456)
T 4dcu_A 243 QEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEG---------------II---EQDKRIAGYAHE 304 (456)
T ss_dssp EEEEETTGGGTTTBTTBCCCCSHHHHHHHHHHHHHCSEEEEEEETTTC---------------CC---HHHHHHHHHHHH
T ss_pred ceEEEEECCCCCcCcccchHHHHHHHHHHHHHHhhCCEEEEEEeCCCC---------------cC---HHHHHHHHHHHH
Confidence 479999999951 1111222 2367789999999998740 01 122333333333
Q ss_pred CCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEee
Q 042025 716 HPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARA 795 (844)
Q Consensus 716 ~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~A 795 (844)
.+.|+||++||.|+..+. .. ..+++.+++...+..+. -.-+++|||
T Consensus 305 ----~~~~~ilv~NK~Dl~~~~----~~--------------------~~~~~~~~~~~~~~~~~------~~~~~~~SA 350 (456)
T 4dcu_A 305 ----AGKAVVIVVNKWDAVDKD----ES--------------------TMKEFEENIRDHFQFLD------YAPILFMSA 350 (456)
T ss_dssp ----TTCEEEEEEECGGGSCCC----SS--------------------HHHHHHHHHHHHCGGGT------TSCEEECCT
T ss_pred ----cCCCEEEEEEChhcCCCc----hH--------------------HHHHHHHHHHHhcccCC------CCCEEEEcC
Confidence 468999999999986531 00 03455566655433221 234788999
Q ss_pred cCCCCHHHHHHHHHHHHhhhh
Q 042025 796 RDRVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 796 tDte~I~evF~~V~e~Ik~~~ 816 (844)
+++.+|+++|+++.+.+....
T Consensus 351 ~~g~gv~~l~~~i~~~~~~~~ 371 (456)
T 4dcu_A 351 LTKKRIHTLMPAIIKASENHS 371 (456)
T ss_dssp TTCTTGGGHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHHhc
Confidence 999999999999998875544
No 136
>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A*
Probab=97.50 E-value=0.00028 Score=80.00 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=66.0
Q ss_pred ceEEEEEeCCCCCCCcc--------cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEGC--------KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~--------KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+.+||+.|+ ...+. ....++.++++||||+|.++-+. .+.+.+-..+++.+
T Consensus 281 ~~l~liDT~G~-~~~~~~ve~~gi~~~~~~~~~aD~vl~VvD~s~~~s--------------~~~~~~~~~~l~~l---- 341 (476)
T 3gee_A 281 TMFRLTDTAGL-REAGEEIEHEGIRRSRMKMAEADLILYLLDLGTERL--------------DDELTEIRELKAAH---- 341 (476)
T ss_dssp EEEEEEC---------------------CCCSSCSEEEEEEETTTCSS--------------GGGHHHHHHHHHHC----
T ss_pred eEEEEEECCCC-CcchhHHHHHHHHHHHhhcccCCEEEEEEECCCCcc--------------hhhhHHHHHHHHhc----
Confidence 57999999998 44442 33557899999999999986211 22244444444443
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|+|+++||+|+.... + .+. + .+.... . +.+..+||.+
T Consensus 342 --~~~piIvV~NK~Dl~~~~------------------------~--~~~--~----~l~~~~--~----~~~i~vSAkt 381 (476)
T 3gee_A 342 --PAAKFLTVANKLDRAANA------------------------D--ALI--R----AIADGT--G----TEVIGISALN 381 (476)
T ss_dssp --TTSEEEEEEECTTSCTTT------------------------H--HHH--H----HHHHHH--T----SCEEECBTTT
T ss_pred --CCCCEEEEEECcCCCCcc------------------------c--hhH--H----HHHhcC--C----CceEEEEECC
Confidence 268999999999986531 0 110 1 111211 0 2367899999
Q ss_pred CCCHHHHHHHHHHHHh
Q 042025 798 RVTVDEAFKYIREVLK 813 (844)
Q Consensus 798 te~I~evF~~V~e~Ik 813 (844)
+.||++.|++|.+.+.
T Consensus 382 g~GI~eL~~~i~~~~~ 397 (476)
T 3gee_A 382 GDGIDTLKQHMGDLVK 397 (476)
T ss_dssp TBSHHHHHHHHTHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999998886
No 137
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=97.47 E-value=0.00022 Score=74.44 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=69.1
Q ss_pred ceEEEEEeCCCCCCCc----------ccceecc--CCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEG----------CKWVEMF--EDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR----------~KW~~~F--edV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+.+||+.|+ ...+ ..|.+|+ ++++++|||+|.++.++. +.+...+
T Consensus 50 ~~~~liDtpG~-~~~~~~~~~~~~~e~i~~~~~~~~~~d~ii~VvD~~~~~~~--------------------~~~~~~l 108 (274)
T 3i8s_A 50 HQVTLVDLPGT-YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERN--------------------LYLTLQL 108 (274)
T ss_dssp CEEEEEECCCC-SCSCC----CCHHHHHHHHHHHHTCCSEEEEEEEGGGHHHH--------------------HHHHHHH
T ss_pred CceEEEECcCC-CccccccccCCHHHHHHHHHHhhcCCCEEEEEecCCChHHH--------------------HHHHHHH
Confidence 47899999998 4444 2234443 799999999998862211 2222222
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
... +.|+||++||+|+..++ .+.. + .+. +.+. + + +-+..+
T Consensus 109 ~~~----~~p~ivv~NK~Dl~~~~----~~~~--------------~----~~~----l~~~---l-----g--~~~i~~ 148 (274)
T 3i8s_A 109 LEL----GIPCIVALNMLDIAEKQ----NIRI--------------E----IDA----LSAR---L-----G--CPVIPL 148 (274)
T ss_dssp HHH----TCCEEEEEECHHHHHHT----TEEE--------------C----HHH----HHHH---H-----T--SCEEEC
T ss_pred Hhc----CCCEEEEEECccchhhh----hHHH--------------H----HHH----HHHh---c-----C--CCEEEE
Confidence 221 68999999999997642 1110 0 111 2111 1 1 237889
Q ss_pred eecCCCCHHHHHHHHHHHHhh
Q 042025 794 RARDRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~Ik~ 814 (844)
||.++.||++.|++|.+.+..
T Consensus 149 SA~~g~gi~el~~~i~~~~~~ 169 (274)
T 3i8s_A 149 VSTRGRGIEALKLAIDRYKAN 169 (274)
T ss_dssp CCGGGHHHHHHHHHHHTCCCC
T ss_pred EcCCCCCHHHHHHHHHHHHhc
Confidence 999999999999998876643
No 138
>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=97.47 E-value=0.00015 Score=80.67 Aligned_cols=111 Identities=10% Similarity=-0.041 Sum_probs=67.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||+.|+ ....+.|..++..+|++|+|||.++-. . .++++.+..+.. +.-.++|
T Consensus 104 ~~~~iiDtpGh-~~f~~~~~~~~~~aD~~ilVvDa~~g~---------------~---~qt~~~l~~~~~---~~~~~iI 161 (434)
T 1zun_B 104 RKFIIADTPGH-EQYTRNMATGASTCDLAIILVDARYGV---------------Q---TQTRRHSYIASL---LGIKHIV 161 (434)
T ss_dssp EEEEEEECCCS-GGGHHHHHHHHTTCSEEEEEEETTTCS---------------C---HHHHHHHHHHHH---TTCCEEE
T ss_pred ceEEEEECCCh-HHHHHHHHHHHhhCCEEEEEEECCCCC---------------c---HHHHHHHHHHHH---cCCCeEE
Confidence 57999999999 677788888999999999999988510 1 122222221111 2223699
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
|++||+|+.... +...+...+.+...+..+. .....+.+..+||.++.||.+.
T Consensus 162 vviNK~Dl~~~~------------------------~~~~~~i~~~~~~~~~~~g--~~~~~~~~i~vSA~~g~gi~~~ 214 (434)
T 1zun_B 162 VAINKMDLNGFD------------------------ERVFESIKADYLKFAEGIA--FKPTTMAFVPMSALKGDNVVNK 214 (434)
T ss_dssp EEEECTTTTTSC------------------------HHHHHHHHHHHHHHHHTTT--CCCSEEEEEECCTTTCTTTSSC
T ss_pred EEEEcCcCCccc------------------------HHHHHHHHHHHHHHHHHhC--CCccCceEEEEeccCCCCcccc
Confidence 999999986410 0001111122222111211 0024577899999999998874
No 139
>1xzp_A Probable tRNA modification GTPase TRME; GTP-binding, THF-binding, hydrolase; 2.30A {Thermotoga maritima} SCOP: a.24.25.1 c.37.1.8 d.250.1.2 PDB: 1xzq_A* 1xzp_B 1xzq_B*
Probab=97.43 E-value=0.00033 Score=79.61 Aligned_cols=106 Identities=11% Similarity=0.201 Sum_probs=70.0
Q ss_pred ceEEEEEeCCCCC-CCc--------ccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGM-NEG--------CKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~r-seR--------~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..+.+||+.|+ + ... +.+..+++++|+||||+|.++- .+ . +..++++.+
T Consensus 291 ~~~~l~DTaG~-~~~~~~~ve~~gi~~~~~~~~~aD~vl~VvD~s~~-------~s-------~----~~~~il~~l--- 348 (482)
T 1xzp_A 291 ILFRIVDTAGV-RSETNDLVERLGIERTLQEIEKADIVLFVLDASSP-------LD-------E----EDRKILERI--- 348 (482)
T ss_dssp EEEEEEESSCC-CSSCCTTCCCCCHHHHHHHHHHCSEEEEEEETTSC-------CC-------H----HHHHHHHHH---
T ss_pred eEEEEEECCCc-cccchhhHHHHHHHHHHHHhhcccEEEEEecCCCC-------CC-------H----HHHHHHHHh---
Confidence 57999999999 4 221 2344578899999999998851 11 1 123344332
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
.+.|+||++||+|+..+ .. .+++.+ +.. ..+-++.+||.
T Consensus 349 ---~~~piivV~NK~DL~~~------~~--------------------~~~~~~-----~~~-------~~~~~i~iSAk 387 (482)
T 1xzp_A 349 ---KNKRYLVVINKVDVVEK------IN--------------------EEEIKN-----KLG-------TDRHMVKISAL 387 (482)
T ss_dssp ---TTSSEEEEEEECSSCCC------CC--------------------HHHHHH-----HHT-------CSTTEEEEEGG
T ss_pred ---cCCCEEEEEECcccccc------cC--------------------HHHHHH-----Hhc-------CCCcEEEEECC
Confidence 36899999999998532 11 122211 111 11226789999
Q ss_pred CCCCHHHHHHHHHHHHhh
Q 042025 797 DRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 797 Dte~I~evF~~V~e~Ik~ 814 (844)
++++|++.|++|.+.+..
T Consensus 388 tg~Gi~eL~~~l~~~~~~ 405 (482)
T 1xzp_A 388 KGEGLEKLEESIYRETQE 405 (482)
T ss_dssp GTCCHHHHHHHHHHHTHH
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 999999999999998763
No 140
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8
Probab=97.43 E-value=9.1e-05 Score=80.63 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=74.1
Q ss_pred ceEEEEEeCCCC---CCCc---ccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC-CC
Q 042025 646 TKYQLIRVNAKG---MNEG---CKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH-PC 718 (844)
Q Consensus 646 ~~~~liDVGGQ~---rseR---~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~-p~ 718 (844)
..+.|||+.|+. ...+ ..|....+.++++|||+|+++++ . .+-+.+...+++.+... +.
T Consensus 206 ~~~~l~DtPG~i~~a~~~~~l~~~fl~~i~~~d~ll~VvD~s~~~-------~-------~~~~~~~~~~~~eL~~~~~~ 271 (342)
T 1lnz_A 206 RSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLE-------G-------RDPYDDYLTINQELSEYNLR 271 (342)
T ss_dssp CEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCCEEEEEEESSCSS-------C-------CCHHHHHHHHHHHHHHSCSS
T ss_pred ceEEEecCCCCcccccccchhHHHHHHHHHhccEEEEEEECCccc-------c-------cChHHHHHHHHHHHHHhhhh
Confidence 368899999851 1112 22333345699999999998632 0 22233333444444442 44
Q ss_pred CCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC
Q 042025 719 FKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 719 f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt 798 (844)
+.+.|+||++||+|+..+. +.+ +-+. +... . .+.++.+||.++
T Consensus 272 l~~~p~ilV~NK~Dl~~~~----------------------------e~~-~~l~----~~l~---~-~~~v~~iSA~tg 314 (342)
T 1lnz_A 272 LTERPQIIVANKMDMPEAA----------------------------ENL-EAFK----EKLT---D-DYPVFPISAVTR 314 (342)
T ss_dssp TTTSCBCBEEECTTSTTHH----------------------------HHH-HHHH----HHCC---S-CCCBCCCSSCCS
T ss_pred hcCCCEEEEEECccCCCCH----------------------------HHH-HHHH----HHhh---c-CCCEEEEECCCC
Confidence 6789999999999986531 011 1111 1111 1 144778999999
Q ss_pred CCHHHHHHHHHHHHhhh
Q 042025 799 VTVDEAFKYIREVLKWD 815 (844)
Q Consensus 799 e~I~evF~~V~e~Ik~~ 815 (844)
++|++.|++|.+.+...
T Consensus 315 ~gi~eL~~~l~~~l~~~ 331 (342)
T 1lnz_A 315 EGLRELLFEVANQLENT 331 (342)
T ss_dssp STTHHHHHHHHHHHTSC
T ss_pred cCHHHHHHHHHHHHhhC
Confidence 99999999999988543
No 141
>3j2k_7 ERF3, eukaryotic polypeptide chain release factor 3; rabbit 80S ribosome, ribosome-translation complex; 17.00A {Oryctolagus cuniculus}
Probab=97.42 E-value=0.00039 Score=77.72 Aligned_cols=122 Identities=9% Similarity=0.041 Sum_probs=72.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
..|.+||+.|+ ....+.+..++..+|++|+|||.++-.. |. ..++..+.++.+..+.. .+.| +
T Consensus 95 ~~~~iiDTPGh-~~f~~~~~~~~~~aD~~ilVVDa~~g~~-----e~------~~~~~~qt~e~l~~~~~----~~v~~i 158 (439)
T 3j2k_7 95 KHFTILDAPGH-KSFVPNMIGGASQADLAVLVISARKGEF-----ET------GFEKGGQTREHAMLAKT----AGVKHL 158 (439)
T ss_pred eEEEEEECCCh-HHHHHHHHhhHhhCCEEEEEEECCCCcc-----cc------ccCCCchHHHHHHHHHH----cCCCeE
Confidence 47999999999 7888899999999999999999985211 00 01111223333332222 2456 9
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
||++||+|+.... |. +...+...+-+...+..+. ......+.+..+||+++.||.+.
T Consensus 159 IvviNK~Dl~~~~--------------~~--------~~~~~~i~~~~~~~l~~~g-~~~~~~~~~i~iSA~~G~ni~~l 215 (439)
T 3j2k_7 159 IVLINKMDDPTVN--------------WS--------NERYEECKEKLVPFLKKVG-FNPKKDIHFMPCSGLTGANLKEQ 215 (439)
T ss_pred EEEeecCCCcccc--------------hH--------HHHHHHHHHHHHHHHHHhc-ccccCCeeEEEeeccCCcccccc
Confidence 9999999985320 00 0001222222222112221 11123577899999999999985
Q ss_pred HH
Q 042025 805 FK 806 (844)
Q Consensus 805 F~ 806 (844)
++
T Consensus 216 ~~ 217 (439)
T 3j2k_7 216 SD 217 (439)
T ss_pred cc
Confidence 54
No 142
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=97.40 E-value=0.00071 Score=74.18 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=71.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE-
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF- 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi- 724 (844)
.++.+||+.|+ ....+.....+..+|++|+||| ++ + ... +..+.+..+-. .+.|.
T Consensus 60 ~~i~iiDtPGh-~~f~~~~~~~~~~aD~ailVvd-~~-----------g----~~~---qt~e~~~~~~~----~~i~~~ 115 (370)
T 2elf_A 60 RNMVFVDAHSY-PKTLKSLITALNISDIAVLCIP-PQ-----------G----LDA---HTGECIIALDL----LGFKHG 115 (370)
T ss_dssp SEEEEEECTTT-TTCHHHHHHHHHTCSEEEEEEC-TT-----------C----CCH---HHHHHHHHHHH----TTCCEE
T ss_pred eEEEEEECCCh-HHHHHHHHHHHHHCCEEEEEEc-CC-----------C----CcH---HHHHHHHHHHH----cCCCeE
Confidence 47999999999 6666667777889999999999 53 0 011 22222222211 24566
Q ss_pred EEEec-ccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEE--EeecC---C
Q 042025 725 VLILN-KYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQ--ARARD---R 798 (844)
Q Consensus 725 ILfLN-K~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~--T~AtD---t 798 (844)
||++| |+|+ .+.. .+...+-+. ++........+-+.. +||++ +
T Consensus 116 ivvvNNK~Dl-~~~~--------------------------~~~~~~~i~----~~l~~~~~~~~~ii~~~~SA~~~~~g 164 (370)
T 2elf_A 116 IIALTRSDST-HMHA--------------------------IDELKAKLK----VITSGTVLQDWECISLNTNKSAKNPF 164 (370)
T ss_dssp EEEECCGGGS-CHHH--------------------------HHHHHHHHH----HHTTTSTTTTCEEEECCCCTTSSSTT
T ss_pred EEEEEeccCC-CHHH--------------------------HHHHHHHHH----HHHHhcCCCceEEEecccccccCcCC
Confidence 89999 9999 4310 011111121 111111113466788 99999 9
Q ss_pred CCHHHHHHHHHHHHhh
Q 042025 799 VTVDEAFKYIREVLKW 814 (844)
Q Consensus 799 e~I~evF~~V~e~Ik~ 814 (844)
++|++.|++|.+.+..
T Consensus 165 ~gi~~L~~~l~~~~~~ 180 (370)
T 2elf_A 165 EGVDELKARINEVAEK 180 (370)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhccc
Confidence 9999999999887643
No 143
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=97.40 E-value=0.00024 Score=74.66 Aligned_cols=107 Identities=14% Similarity=0.188 Sum_probs=70.4
Q ss_pred ceEEEEEeCCCCCCCc------ccceeccC--CccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEG------CKWVEMFE--DVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR------~KW~~~Fe--dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
.++++||+.|+ ...+ ..|..|+. ++++||+|+|.++.. + .+.++..+..
T Consensus 49 ~~l~l~DtpG~-~~~~~~~~~e~v~~~~~~~~~~d~vi~V~D~t~~e-----------------~---~~~~~~~l~~-- 105 (272)
T 3b1v_A 49 KDLEIQDLPGI-YSMSPYSPEAKVARDYLLSQRADSILNVVDATNLE-----------------R---NLYLTTQLIE-- 105 (272)
T ss_dssp TTEEEEECCCC-SCSSCSSHHHHHHHHHHHTTCCSEEEEEEEGGGHH-----------------H---HHHHHHHHHH--
T ss_pred CeEEEEECCCc-CccCCCChHHHHHHHHHhcCCCCEEEEEecCCchH-----------------h---HHHHHHHHHh--
Confidence 46899999999 5554 34556664 699999999988521 1 1233334433
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|++|++||+|+..++ .+.. + .+. +... + + +.+..|||.+
T Consensus 106 --~~~p~ilv~NK~Dl~~~~----~~~~--------------~----~~~----l~~~---l-----g--~~vi~~SA~~ 147 (272)
T 3b1v_A 106 --TGIPVTIALNMIDVLDGQ----GKKI--------------N----VDK----LSYH---L-----G--VPVVATSALK 147 (272)
T ss_dssp --TCSCEEEEEECHHHHHHT----TCCC--------------C----HHH----HHHH---H-----T--SCEEECBTTT
T ss_pred --cCCCEEEEEEChhhCCcC----CcHH--------------H----HHH----HHHH---c-----C--CCEEEEEccC
Confidence 368999999999997642 1110 0 111 1111 1 1 2378899999
Q ss_pred CCCHHHHHHHHHHHHh
Q 042025 798 RVTVDEAFKYIREVLK 813 (844)
Q Consensus 798 te~I~evF~~V~e~Ik 813 (844)
+.||++.|+++.+.+.
T Consensus 148 g~gi~el~~~i~~~~~ 163 (272)
T 3b1v_A 148 QTGVDQVVKKAAHTTT 163 (272)
T ss_dssp TBSHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999987653
No 144
>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: b.43.3.1 b.43.3.1 c.20.1.1 c.37.1.8 PDB: 1g7r_A* 1g7t_A*
Probab=97.40 E-value=0.00041 Score=80.79 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=80.4
Q ss_pred eEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEE
Q 042025 647 KYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVL 726 (844)
Q Consensus 647 ~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiIL 726 (844)
.+.+||+.|+ ......|..++..+|++|+|+|.++ | . +.++++.+..+.. .+.|+||
T Consensus 71 ~i~liDTPGh-e~F~~~~~r~~~~aD~aILVvDa~~-----------G-----v--~~qT~e~l~~l~~----~~vPiIV 127 (594)
T 1g7s_A 71 GLFFIDTPGH-EAFTTLRKRGGALADLAILIVDINE-----------G-----F--KPQTQEALNILRM----YRTPFVV 127 (594)
T ss_dssp EEEEECCCTT-SCCTTSBCSSSBSCSEEEEEEETTT-----------C-----C--CHHHHHHHHHHHH----TTCCEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHhhCCEEEEEEECCC-----------C-----c--cHhHHHHHHHHHH----cCCeEEE
Confidence 5889999999 7888888889999999999999885 1 0 1233444443332 4689999
Q ss_pred EecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHH----HHHHHHHHHHhhhc------cC--CCCcEEEEEEe
Q 042025 727 ILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQ----AYYYVAMKFKDLYA------SL--TGRKLFVWQAR 794 (844)
Q Consensus 727 fLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~----A~~YI~~KFl~L~~------s~--~~Rklyvh~T~ 794 (844)
++||+|+....- +-..++++..... +.+. +.. ...-+...+....- .. ..+.+-+..+|
T Consensus 128 ViNKiDl~~~~~---~~~~~~~~e~sa~-----~~~~-v~~~~~e~i~ei~~~L~e~gl~~e~~~~l~~~~~~vpvv~vS 198 (594)
T 1g7s_A 128 AANKIDRIHGWR---VHEGRPFMETFSK-----QDIQ-VQQKLDTKVYELVGKLHEEGFESERFDRVTDFASQVSIIPIS 198 (594)
T ss_dssp EEECGGGSTTCC---CCTTCCHHHHHTT-----SCHH-HHHHHHHHHHHHHHHHHHTTCEEEEGGGCSCTTTEEEEEECC
T ss_pred Eecccccccccc---cccCCchHHHHHH-----hHHH-HHHHHHHHHHHHHHHHHHcCcchHHHHHHHhccCcceEEEEe
Confidence 999999964210 0000111111111 1110 111 11111122211100 00 13456789999
Q ss_pred ecCCCCHHHHHHHHHHHHh
Q 042025 795 ARDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 795 AtDte~I~evF~~V~e~Ik 813 (844)
|+++.||++.+++|.+.+.
T Consensus 199 A~tG~GI~eLl~~I~~~~~ 217 (594)
T 1g7s_A 199 AITGEGIPELLTMLMGLAQ 217 (594)
T ss_dssp TTTCTTHHHHHHHHHHHHH
T ss_pred ccCCCCchhHHHHHHhhcc
Confidence 9999999999999998764
No 145
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=97.40 E-value=8.4e-05 Score=82.61 Aligned_cols=107 Identities=18% Similarity=0.230 Sum_probs=65.1
Q ss_pred ceEEEEEeCCCCC--------CCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGM--------NEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~r--------seR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..|++||++|+ . ..+..|..+++++|+||||+|.++- . + ..-..+..++..
T Consensus 51 ~~~~l~DT~G~-~~~~~~~~~~~~~~~~~~~~~ad~il~vvD~~~~-------~--------~----~~d~~~~~~l~~- 109 (436)
T 2hjg_A 51 YDFNLIDTGGI-DIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREG-------V--------T----AADEEVAKILYR- 109 (436)
T ss_dssp SCCEEEC----------CHHHHHHHHHHHHHHHCSEEEEEEETTTC-------S--------C----HHHHHHHHHHTT-
T ss_pred ceEEEEECCCC-CCcchhHHHHHHHHHHHHHHhCCEEEEEEeCCCC-------C--------C----HHHHHHHHHHHH-
Confidence 46899999998 3 3466788899999999999998741 0 1 111223334432
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|+||++||+|+..... .+. + |..+. . + -++.+||.+
T Consensus 110 --~~~pvilv~NK~D~~~~~~---~~~------~------------------------~~~lg--~-~---~~~~iSA~~ 148 (436)
T 2hjg_A 110 --TKKPVVLAVNKLDNTEMRA---NIY------D------------------------FYSLG--F-G---EPYPISGTH 148 (436)
T ss_dssp --CCSCEEEEEECCCC--------CCC------S------------------------SGGGS--S-C---CCEECBTTT
T ss_pred --cCCCEEEEEECccCccchh---hHH------H------------------------HHHcC--C-C---CeEEEeCcC
Confidence 4689999999999875310 010 1 11111 0 1 256789999
Q ss_pred CCCHHHHHHHHHHHHhh
Q 042025 798 RVTVDEAFKYIREVLKW 814 (844)
Q Consensus 798 te~I~evF~~V~e~Ik~ 814 (844)
+.++.+.|++|.+.+..
T Consensus 149 g~gv~~L~~~i~~~l~~ 165 (436)
T 2hjg_A 149 GLGLGDLLDAVAEHFKN 165 (436)
T ss_dssp TBTHHHHHHHHHHTGGG
T ss_pred CCChHHHHHHHHHhcCc
Confidence 99999999999887753
No 146
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=97.38 E-value=0.00051 Score=77.47 Aligned_cols=117 Identities=12% Similarity=0.035 Sum_probs=72.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...++.+..++.++|++|+|||.++-.. ++ ..+.+...++.+..+-. +...|+|
T Consensus 111 ~~~~iiDTPG~-~~f~~~~~~~~~~aD~~llVvDa~~g~~-----~~------~~~~~~qt~e~~~~~~~---~~~~~iI 175 (483)
T 3p26_A 111 ANFTIVDAPGH-RDFVPNAIMGISQADMAILCVDCSTNAF-----ES------GFDLDGQTKEHMLLASS---LGIHNLI 175 (483)
T ss_dssp CEEEEECCCCC-GGGHHHHHHHHTTCSEEEEEEECCC-----------------CCCCHHHHHHHHHHHH---TTCCCEE
T ss_pred ceEEEEECCCc-HHHHHHHHHhhhhCCEEEEEEECCCCcc-----cc------ccchhhhHHHHHHHHHH---cCCCcEE
Confidence 57999999999 7888889999999999999999986211 00 01122222332222222 2235799
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDE 803 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~e 803 (844)
|++||+|+.... +...+++.+.+...+..+. .....+-+..+||.+++||.+
T Consensus 176 vviNK~Dl~~~~------------------------~~~~~~i~~~~~~~l~~~g--~~~~~~~~i~iSA~~g~gi~e 227 (483)
T 3p26_A 176 IAMNKMDNVDWS------------------------QQRFEEIKSKLLPYLVDIG--FFEDNINWVPISGFSGEGVYK 227 (483)
T ss_dssp EEEECGGGGTTC------------------------HHHHHHHHHHHHHHHHHHT--CCGGGEEEEECCSSSCTTSSS
T ss_pred EEEECcCcccch------------------------HHHHHHHHHHHHHHHHHcC--CCcccceEEEEeeecCCCccc
Confidence 999999986420 0012334444444333332 122357789999999999874
No 147
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=97.37 E-value=0.00016 Score=77.04 Aligned_cols=109 Identities=16% Similarity=0.098 Sum_probs=66.9
Q ss_pred ceEEEEEeCCCCCCC--------cccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNE--------GCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rse--------R~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
.++.+||+.|+ ... +..+..++.++|++|||+|.++-. ... ...+++.+-..
T Consensus 55 ~~l~l~DTpG~-~~~~~~l~~~~~~~~~~~l~~ad~il~VvD~~~~~----------------~~~--~~~i~~~l~~~- 114 (301)
T 1wf3_A 55 RQIVFVDTPGL-HKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPP----------------TPE--DELVARALKPL- 114 (301)
T ss_dssp EEEEEEECCCC-CCCCSHHHHHHHHHHHHHTSSCSEEEEEEETTSCC----------------CHH--HHHHHHHHGGG-
T ss_pred cEEEEecCccc-cchhhHHHHHHHHHHHHHHhcCCEEEEEEECCCCC----------------ChH--HHHHHHHHHhh-
Confidence 57899999998 442 234556788999999999998510 111 12223333222
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
+.+.|+||++||+|+..+.- ...+.+. .+ . .-.-++.+||.+
T Consensus 115 -~~~~p~ilV~NK~Dl~~~~~----------------------------~~~~~~~-~~---~-----~~~~~~~iSA~~ 156 (301)
T 1wf3_A 115 -VGKVPILLVGNKLDAAKYPE----------------------------EAMKAYH-EL---L-----PEAEPRMLSALD 156 (301)
T ss_dssp -TTTSCEEEEEECGGGCSSHH----------------------------HHHHHHH-HT---S-----TTSEEEECCTTC
T ss_pred -cCCCCEEEEEECcccCCchH----------------------------HHHHHHH-Hh---c-----CcCcEEEEeCCC
Confidence 24789999999999864210 0111111 11 1 112367788888
Q ss_pred CCCHHHHHHHHHHHH
Q 042025 798 RVTVDEAFKYIREVL 812 (844)
Q Consensus 798 te~I~evF~~V~e~I 812 (844)
+.++++.|+++.+.+
T Consensus 157 g~gv~~l~~~l~~~l 171 (301)
T 1wf3_A 157 ERQVAELKADLLALM 171 (301)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhc
Confidence 888888888877654
No 148
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=97.36 E-value=0.00022 Score=79.28 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=70.0
Q ss_pred ceEEEEEeCCCCCC---------CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGMN---------EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~rs---------eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..|++||++|+ .. .+..|..+++++|+||||+|.++ + .....+ .+..++..
T Consensus 49 ~~~~l~DT~G~-~~~~~~~~~~~~~~~~~~~~~~ad~il~V~D~~~-----------~-----~~~~d~---~i~~~l~~ 108 (439)
T 1mky_A 49 KTFKLVDTCGV-FDNPQDIISQKMKEVTLNMIREADLVLFVVDGKR-----------G-----ITKEDE---SLADFLRK 108 (439)
T ss_dssp EEEEEEECTTT-TSSGGGCCCHHHHHHHHHHHTTCSEEEEEEETTT-----------C-----CCHHHH---HHHHHHHH
T ss_pred eEEEEEECCCc-cccccchHHHHHHHHHHHHHHhCCEEEEEEECCC-----------C-----CCHHHH---HHHHHHHH
Confidence 46899999998 32 24568889999999999999864 0 111111 11222221
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
.+.|++|++||+|+.... . ..+ ...|..+. . + . ++.+||.
T Consensus 109 ---~~~p~ilv~NK~D~~~~~------~---------------------~~~----~~~~~~lg--~-~-~--~~~iSA~ 148 (439)
T 1mky_A 109 ---STVDTILVANKAENLREF------E---------------------REV----KPELYSLG--F-G-E--PIPVSAE 148 (439)
T ss_dssp ---HTCCEEEEEESCCSHHHH------H---------------------HHT----HHHHGGGS--S-C-S--CEECBTT
T ss_pred ---cCCCEEEEEeCCCCcccc------H---------------------HHH----HHHHHhcC--C-C-C--EEEEecc
Confidence 268999999999986420 0 001 01122221 1 1 1 4688999
Q ss_pred CCCCHHHHHHHHHHHHhh
Q 042025 797 DRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 797 Dte~I~evF~~V~e~Ik~ 814 (844)
++.||.+.|++|.+.+..
T Consensus 149 ~g~gv~~L~~~i~~~l~~ 166 (439)
T 1mky_A 149 HNINLDTMLETIIKKLEE 166 (439)
T ss_dssp TTBSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccc
Confidence 999999999999988764
No 149
>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1xb2_A* 2hcj_A* 2hdn_A*
Probab=97.30 E-value=0.00035 Score=76.84 Aligned_cols=67 Identities=16% Similarity=0.141 Sum_probs=48.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
..+.+||+.|+ ....+.+..++..+|++|+|||.++-. +.++++.+..+.. .+.| +
T Consensus 66 ~~~~iiDtpG~-~~f~~~~~~~~~~aD~~ilVvda~~g~------------------~~qt~e~l~~~~~----~~vp~i 122 (397)
T 1d2e_A 66 RHYAHTDCPGH-ADYVKNMITGTAPLDGCILVVAANDGP------------------MPQTREHLLLARQ----IGVEHV 122 (397)
T ss_dssp CEEEEEECSSH-HHHHHHHHHTSSCCSEEEEEEETTTCS------------------CHHHHHHHHHHHH----TTCCCE
T ss_pred eEEEEEECCCh-HHHHHHHHhhHhhCCEEEEEEECCCCC------------------CHHHHHHHHHHHH----cCCCeE
Confidence 57999999999 666677888899999999999988511 1233333322222 2567 7
Q ss_pred EEEecccchhh
Q 042025 725 VLILNKYDLFE 735 (844)
Q Consensus 725 ILfLNK~DLfe 735 (844)
||++||+|+..
T Consensus 123 ivviNK~Dl~~ 133 (397)
T 1d2e_A 123 VVYVNKADAVQ 133 (397)
T ss_dssp EEEEECGGGCS
T ss_pred EEEEECcccCC
Confidence 89999999863
No 150
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=97.29 E-value=0.00018 Score=81.54 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=75.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ....+.+..++..+|++|+|||.++- .. .++++.+..+-. .+.|+|
T Consensus 73 ~~i~iiDtPGh-~~~~~~~~~~~~~aD~~ilVvda~~g---------------~~---~qt~e~l~~~~~----~~ip~I 129 (482)
T 1wb1_A 73 YRITLVDAPGH-ADLIRAVVSAADIIDLALIVVDAKEG---------------PK---TQTGEHMLILDH----FNIPII 129 (482)
T ss_dssp EEEEECCCSSH-HHHHHHHHHHTTSCCEEEEEEETTTC---------------SC---HHHHHHHHHHHH----TTCCBC
T ss_pred EEEEEEECCCh-HHHHHHHHHHHhhCCEEEEEEecCCC---------------cc---HHHHHHHHHHHH----cCCCEE
Confidence 57999999999 66777888899999999999998741 01 122222221111 357889
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+.- +. ...+++.+|+. .... . ..+.+..+||.+++||++.+
T Consensus 130 vviNK~Dl~~~~~----~~------------------~~~~~l~~~l~----~~~~-~--~~~~ii~vSA~~g~gI~~L~ 180 (482)
T 1wb1_A 130 VVITKSDNAGTEE----IK------------------RTEMIMKSILQ----STHN-L--KNSSIIPISAKTGFGVDELK 180 (482)
T ss_dssp EEEECTTSSCHHH----HH------------------HHHHHHHHHHH----HSSS-G--GGCCEEECCTTTCTTHHHHH
T ss_pred EEEECCCcccchh----HH------------------HHHHHHHHHHh----hhcc-c--ccceEEEEECcCCCCHHHHH
Confidence 9999999875310 00 00122222222 1100 0 13447889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 181 ~~L~~~i~ 188 (482)
T 1wb1_A 181 NLIITTLN 188 (482)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 99998774
No 151
>1s0u_A EIF-2-gamma, translation initiation factor 2 gamma subunit; GTPase, EF-1A, tRNA; 2.40A {Methanocaldococcus jannaschii} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=97.27 E-value=0.00021 Score=78.79 Aligned_cols=117 Identities=13% Similarity=0.131 Sum_probs=68.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ....+.+......+|++|+|||.++-. ......+.+.+++. +...|+|
T Consensus 81 ~~i~iiDtPGh-~~f~~~~~~~~~~~D~~ilVvda~~g~--------------~~~qt~e~l~~~~~------l~~~~ii 139 (408)
T 1s0u_A 81 RRVSFVDSPGH-ETLMATMLSGASLMDGAILVIAANEPC--------------PQPQTKEHLMALEI------LGIDKII 139 (408)
T ss_dssp EEEEEEECSSH-HHHHHHHHTTCSCCSEEEEEEETTSCS--------------SCHHHHHHHHHHHH------TTCCCEE
T ss_pred cEEEEEECCCH-HHHHHHHHHhHhhCCEEEEEEECCCCC--------------CCchhHHHHHHHHH------cCCCeEE
Confidence 46899999999 666666777777889999999988510 00111122233321 2335899
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... .+. ...+++.+|+. .. ....+-+..+||.++++|++.|
T Consensus 140 vv~NK~Dl~~~~----~~~------------------~~~~~i~~~l~----~~----~~~~~~~i~vSA~~g~gi~~L~ 189 (408)
T 1s0u_A 140 IVQNKIDLVDEK----QAE------------------ENYEQIKEFVK----GT----IAENAPIIPISAHHEANIDVLL 189 (408)
T ss_dssp EEEECTTSSCTT----TTT------------------THHHHHHHHHT----TS----TTTTCCEEEC------CHHHHH
T ss_pred EEEEccCCCCHH----HHH------------------HHHHHHHHHHh----hc----CCCCCeEEEeeCCCCCCHHHHH
Confidence 999999986531 000 01233333221 11 1234557889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 190 ~~l~~~i~ 197 (408)
T 1s0u_A 190 KAIQDFIP 197 (408)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998664
No 152
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=97.25 E-value=0.0012 Score=71.25 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=73.6
Q ss_pred ceEEEEEeCCCCCCCcccc----------eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHc
Q 042025 646 TKYQLIRVNAKGMNEGCKW----------VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIR 715 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW----------~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n 715 (844)
..+.+||+.|+ .. +..| ..+...++++|||+|+++.... -+.+...+++.+..
T Consensus 214 ~~~~l~Dt~G~-~~-~~~~~~~~~~~~~~~~~~~~ad~illV~D~s~~~~~---------------~~~~~~~~~~~i~~ 276 (357)
T 2e87_A 214 FRYQIIDTPGL-LD-RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGF---------------PLEEQIHLFEEVHG 276 (357)
T ss_dssp EEEEEEECTTT-SS-SCSTTSCHHHHHHHHGGGGTCSEEEEEECTTCTTSS---------------CHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCc-cc-cchhhhhHHHHHHHHHHHhcCCEEEEEEeCCccccC---------------CHHHHHHHHHHHHH
Confidence 57999999998 33 2222 1234468999999998752110 12334455555554
Q ss_pred CCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEee
Q 042025 716 HPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARA 795 (844)
Q Consensus 716 ~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~A 795 (844)
. +.+.|+|+++||.|+.... . .+.+..++. . ..+-++.+||
T Consensus 277 ~--~~~~piilV~NK~Dl~~~~------~--------------------~~~~~~~~~----~-------~~~~~~~iSA 317 (357)
T 2e87_A 277 E--FKDLPFLVVINKIDVADEE------N--------------------IKRLEKFVK----E-------KGLNPIKISA 317 (357)
T ss_dssp H--TTTSCEEEEECCTTTCCHH------H--------------------HHHHHHHHH----H-------TTCCCEECBT
T ss_pred h--cCCCCEEEEEECcccCChH------H--------------------HHHHHHHHH----h-------cCCCeEEEeC
Confidence 2 2278999999999986531 0 122222221 1 1123678999
Q ss_pred cCCCCHHHHHHHHHHHHhhhh
Q 042025 796 RDRVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 796 tDte~I~evF~~V~e~Ik~~~ 816 (844)
.+++||++.|+++.+.+....
T Consensus 318 ~~g~gi~~l~~~i~~~l~~~~ 338 (357)
T 2e87_A 318 LKGTGIDLVKEEIIKTLRPLA 338 (357)
T ss_dssp TTTBTHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999886543
No 153
>3izy_P Translation initiation factor IF-2, mitochondrial; E coli, RNA, ribosomal; 10.80A {Bos taurus}
Probab=97.25 E-value=0.00031 Score=80.97 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=78.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||+.|+ ...+..|..++..+|++|+|+|.++ + .+.+.++.+..+.. .+.|+|
T Consensus 52 ~~i~~iDTPGh-e~f~~~~~~~~~~aD~vILVVDa~d-----------g-------~~~qt~e~l~~~~~----~~vPiI 108 (537)
T 3izy_P 52 EKITFLDTPGH-AAFSAMRARGTQVTDIVILVVAADD-----------G-------VMKQTVESIQHAKD----AHVPIV 108 (537)
T ss_dssp SCCBCEECSSS-CCTTTSBBSSSBSBSSCEEECBSSS-----------C-------CCHHHHHHHHHHHT----TTCCEE
T ss_pred CEEEEEECCCh-HHHHHHHHHHHccCCEEEEEEECCC-----------C-------ccHHHHHHHHHHHH----cCCcEE
Confidence 36789999999 7888899999999999999999875 1 12234444444443 367999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..... .. .. +.... + .+....-+..+.++.+||.++.||++.|
T Consensus 109 VViNKiDl~~~~~----~~-------v~------------~~l~~-----~-~~~~e~~~~~~~iv~vSAktG~GI~eLl 159 (537)
T 3izy_P 109 LAINKCDKAEADP----EK-------VK------------KELLA-----Y-DVVCEDYGGDVQAVHVSALTGENMMALA 159 (537)
T ss_dssp ECCBSGGGTTTSC----CS-------SS------------SHHHH-----T-TSCCCCSSSSEEECCCCSSSSCSSHHHH
T ss_pred EEEecccccccch----HH-------HH------------HHHHh-----h-hhhHHhcCCCceEEEEECCCCCCchhHH
Confidence 9999999865311 00 00 01000 0 1110111235678889999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++...+..
T Consensus 160 e~I~~l~~~ 168 (537)
T 3izy_P 160 EATIALAEM 168 (537)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhhhc
Confidence 999887653
No 154
>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 2y0u_Z* 2y0w_Z* 2y0y_Z* 2y10_Z* 2y12_Z* 2y14_Z* 2y16_Z* 2y18_Z* 2wrn_Z* 2wrq_Z* 2c77_A* 1aip_A 1exm_A* 1ha3_A* 2xqd_Z* 3fic_Z* 4abr_Z* 1b23_P* 1ob5_A* 1ttt_A* ...
Probab=97.22 E-value=0.00046 Score=75.85 Aligned_cols=67 Identities=15% Similarity=0.216 Sum_probs=48.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
..+.+||+.|+ ....+.+..++..+|++|+|||.++-. . .+.++.+..+.. .+.| +
T Consensus 75 ~~~~iiDtpG~-~~f~~~~~~~~~~aD~~ilVvda~~g~---------------~---~qt~~~l~~~~~----~~ip~i 131 (405)
T 2c78_A 75 RHYSHVDCPGH-ADYIKNMITGAAQMDGAILVVSAADGP---------------M---PQTREHILLARQ----VGVPYI 131 (405)
T ss_dssp CEEEEEECCCS-GGGHHHHHHHHTTCSSEEEEEETTTCC---------------C---HHHHHHHHHHHH----TTCCCE
T ss_pred eEEEEEECCCh-HHHHHHHHHHHHHCCEEEEEEECCCCC---------------c---HHHHHHHHHHHH----cCCCEE
Confidence 57999999999 677777888899999999999987511 1 123333333222 2567 8
Q ss_pred EEEecccchhh
Q 042025 725 VLILNKYDLFE 735 (844)
Q Consensus 725 ILfLNK~DLfe 735 (844)
||++||+|+..
T Consensus 132 ivviNK~Dl~~ 142 (405)
T 2c78_A 132 VVFMNKVDMVD 142 (405)
T ss_dssp EEEEECGGGCC
T ss_pred EEEEECccccC
Confidence 99999999863
No 155
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, translation; 2.80A {Escherichia coli} PDB: 3deg_C*
Probab=97.18 E-value=0.00085 Score=78.28 Aligned_cols=113 Identities=12% Similarity=0.050 Sum_probs=77.5
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
...+.+||+.|+ ......|..++..+|++|+|||.++-.+ .+++..|..... .+.|+
T Consensus 70 ~~~l~liDTPGh-~dF~~ev~~~l~~aD~aILVVDa~~gv~------------------~qt~~~~~~~~~----~~ipi 126 (599)
T 3cb4_D 70 TYQLNFIDTPGH-VDFSYEVSRSLAACEGALLVVDAGQGVE------------------AQTLANCYTAME----MDLEV 126 (599)
T ss_dssp EEEEEEEECCCC-GGGHHHHHHHHHHCSEEEEEEETTTCCC------------------THHHHHHHHHHH----TTCEE
T ss_pred eEEEEEEECCCc-hHHHHHHHHHHHHCCEEEEEEECCCCCC------------------HHHHHHHHHHHH----CCCCE
Confidence 367999999999 7777788889999999999999985111 123333443333 36799
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEA 804 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~ev 804 (844)
|+++||+|+..+. .+.+.+-+...| .+. ..-+..+||.++.+|++.
T Consensus 127 IvViNKiDl~~a~---------------------------~~~v~~ei~~~l-g~~------~~~vi~vSAktg~GI~~L 172 (599)
T 3cb4_D 127 VPVLNKIDLPAAD---------------------------PERVAEEIEDIV-GID------ATDAVRCSAKTGVGVQDV 172 (599)
T ss_dssp EEEEECTTSTTCC---------------------------HHHHHHHHHHHT-CCC------CTTCEEECTTTCTTHHHH
T ss_pred EEeeeccCccccc---------------------------HHHHHHHHHHHh-CCC------cceEEEeecccCCCchhH
Confidence 9999999986521 112222233222 111 112678999999999999
Q ss_pred HHHHHHHHhh
Q 042025 805 FKYIREVLKW 814 (844)
Q Consensus 805 F~~V~e~Ik~ 814 (844)
|++|.+.+..
T Consensus 173 l~~I~~~lp~ 182 (599)
T 3cb4_D 173 LERLVRDIPP 182 (599)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHhhcCCC
Confidence 9999987754
No 156
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=97.11 E-value=0.00037 Score=77.44 Aligned_cols=116 Identities=11% Similarity=0.091 Sum_probs=74.9
Q ss_pred ceEEEEEeCCCCCCCcccc------------eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEGCKW------------VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW------------~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+++||+.|+ +. +.++ ..+++.++++|+|+|.++- . . .+.+.++..+
T Consensus 223 ~~~~l~DT~G~-~~-~~~~~~~~e~~~~~~~~~~~~~ad~~llv~D~~~~-------~--------s---~~~~~~~~~~ 282 (436)
T 2hjg_A 223 QEFVIVDTAGM-RK-KGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEG-------I--------I---EQDKRIAGYA 282 (436)
T ss_dssp EEEEETTHHHH-TC-BTTBCCCCSHHHHHHHHHHHHHCSEEEEEEETTTC-------C--------C---HHHHHHHHHH
T ss_pred eEEEEEECCCc-Cc-CccccchHHHHHHHHHHHHHHhCCEEEEEEcCCcC-------C--------c---HHHHHHHHHH
Confidence 46999999998 32 2221 1367789999999998851 0 1 1223344444
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
.. .+.|+||++||.|+..+. ..+ .+++.+.+..+|..+. ..-++++
T Consensus 283 ~~----~~~~iiiv~NK~Dl~~~~----~~~--------------------~~~~~~~~~~~l~~~~------~~~~~~~ 328 (436)
T 2hjg_A 283 HE----AGKAVVIVVNKWDAVDKD----EST--------------------MKEFEENIRDHFQFLD------YAPILFM 328 (436)
T ss_dssp HH----TTCEEEEEEECGGGSCCC----TTH--------------------HHHHHHHHHHHCGGGT------TSCEEEC
T ss_pred HH----cCCcEEEEEECccCCCcc----hHH--------------------HHHHHHHHHHhcccCC------CCCEEEE
Confidence 43 368999999999986531 000 2333444544443221 2237899
Q ss_pred eecCCCCHHHHHHHHHHHHhhh
Q 042025 794 RARDRVTVDEAFKYIREVLKWD 815 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~Ik~~ 815 (844)
||.++.+|++.|+++.+.+...
T Consensus 329 SA~tg~~v~~l~~~i~~~~~~~ 350 (436)
T 2hjg_A 329 SALTKKRIHTLMPAIIKASENH 350 (436)
T ss_dssp CTTTCTTGGGHHHHHHHHHHHH
T ss_pred ecccCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999887654
No 157
>1kk1_A EIF2gamma; initiation of translation; HET: GNP; 1.80A {Pyrococcus abyssi} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1kjz_A* 1kk2_A* 1kk3_A* 1kk0_A* 2d74_A 2dcu_A*
Probab=97.10 E-value=0.00081 Score=74.04 Aligned_cols=117 Identities=9% Similarity=0.077 Sum_probs=72.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ....+.+......+|++|+|||.++-. ......+.+.+++.+ ...|+|
T Consensus 83 ~~i~iiDtPGh-~~f~~~~~~~~~~~D~~ilVvda~~g~--------------~~~qt~e~l~~~~~~------~~~~ii 141 (410)
T 1kk1_A 83 RRVSFIDAPGH-EALMTTMLAGASLMDGAILVIAANEPC--------------PRPQTREHLMALQII------GQKNII 141 (410)
T ss_dssp EEEEEEECSSH-HHHHHHHHHCGGGCSEEEEEEETTSCS--------------SCHHHHHHHHHHHHH------TCCCEE
T ss_pred cEEEEEECCCh-HHHHHHHHhhhhhCCEEEEEEECCCCC--------------CChhHHHHHHHHHHc------CCCcEE
Confidence 46899999999 555555566667789999999988510 011112333333321 235899
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+..+.- +. ...+++.+|+ ... ....+-+..+||.++.+|++.|
T Consensus 142 vviNK~Dl~~~~~----~~------------------~~~~~i~~~l----~~~----~~~~~~~i~vSA~~g~gi~~L~ 191 (410)
T 1kk1_A 142 IAQNKIELVDKEK----AL------------------ENYRQIKEFI----EGT----VAENAPIIPISALHGANIDVLV 191 (410)
T ss_dssp EEEECGGGSCHHH----HH------------------HHHHHHHHHH----TTS----TTTTCCEEECBTTTTBSHHHHH
T ss_pred EEEECccCCCHHH----HH------------------HHHHHHHHHH----Hhc----CcCCCeEEEeeCCCCCCHHHHH
Confidence 9999999865310 00 0022222222 111 1234558889999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 192 ~~l~~~~~ 199 (410)
T 1kk1_A 192 KAIEDFIP 199 (410)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998664
No 158
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural GE NPPSFA; 2.05A {Aquifex aeolicus} PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Probab=97.00 E-value=0.001 Score=77.62 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=76.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ......|..++..+|++|+|||.++-.+ .+++..|..... .+.|+|
T Consensus 73 ~~inliDTPGh-~dF~~ev~r~l~~aD~aILVVDa~~gv~------------------~qt~~~~~~a~~----~~ipiI 129 (600)
T 2ywe_A 73 YKLHLIDTPGH-VDFSYEVSRALAACEGALLLIDASQGIE------------------AQTVANFWKAVE----QDLVII 129 (600)
T ss_dssp EEEEEECCCCS-GGGHHHHHHHHHTCSEEEEEEETTTBCC------------------HHHHHHHHHHHH----TTCEEE
T ss_pred EEEEEEECCCc-HhHHHHHHHHHHhCCEEEEEEECCCCcc------------------HHHHHHHHHHHH----CCCCEE
Confidence 57889999999 6777788889999999999999885111 133444444443 368999
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
+++||+|+..+. .+.+.+-|.+.| .+ ...-+.++||.++.||++.|
T Consensus 130 vviNKiDl~~a~---------------------------~~~v~~el~~~l-g~------~~~~vi~vSAktg~GI~~Ll 175 (600)
T 2ywe_A 130 PVINKIDLPSAD---------------------------VDRVKKQIEEVL-GL------DPEEAILASAKEGIGIEEIL 175 (600)
T ss_dssp EEEECTTSTTCC---------------------------HHHHHHHHHHTS-CC------CGGGCEECBTTTTBSHHHHH
T ss_pred EEEeccCccccC---------------------------HHHHHHHHHHhh-CC------CcccEEEEEeecCCCchHHH
Confidence 999999986421 111111122211 11 11126789999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
++|.+.+..
T Consensus 176 e~I~~~lp~ 184 (600)
T 2ywe_A 176 EAIVNRIPP 184 (600)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHhccc
Confidence 999887754
No 159
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=96.99 E-value=0.00095 Score=73.05 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=70.9
Q ss_pred CCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhh
Q 042025 658 MNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEK 737 (844)
Q Consensus 658 rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeK 737 (844)
...|+.+.++++..+.||+|||++|++..+ .+.+.+ . +.+.|+||++||.|++...
T Consensus 59 e~f~~~L~~~~~~~~lil~VvD~~d~~~s~------------~~~l~~-------~-----l~~~piilV~NK~DLl~~~ 114 (369)
T 3ec1_A 59 DDFLSMLHRIGESKALVVNIVDIFDFNGSF------------IPGLPR-------F-----AADNPILLVGNKADLLPRS 114 (369)
T ss_dssp CHHHHHHHHHHHHCCEEEEEEETTCSGGGC------------CSSHHH-------H-----CTTSCEEEEEECGGGSCTT
T ss_pred HHHHHHHHHhhccCcEEEEEEECCCCCCch------------hhHHHH-------H-----hCCCCEEEEEEChhcCCCc
Confidence 567788999999999999999999987544 222222 2 2378999999999997531
Q ss_pred hhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHHHHHHHH
Q 042025 738 VNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFKYIREVL 812 (844)
Q Consensus 738 I~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~~V~e~I 812 (844)
. + .+.+.+|+...+..+. -+...++++||.++.++++.++++.+.+
T Consensus 115 ~----------------------~---~~~~~~~l~~~~~~~g----~~~~~v~~iSA~~g~gi~~L~~~I~~~~ 160 (369)
T 3ec1_A 115 V----------------------K---YPKLLRWMRRMAEELG----LCPVDVCLVSAAKGIGMAKVMEAINRYR 160 (369)
T ss_dssp C----------------------C---HHHHHHHHHHHHHTTT----CCCSEEEECBTTTTBTHHHHHHHHHHHH
T ss_pred c----------------------C---HHHHHHHHHHHHHHcC----CCcccEEEEECCCCCCHHHHHHHHHhhc
Confidence 0 0 2334455544333321 2334578999999999999999988765
No 160
>1jny_A EF-1-alpha, elongation factor 1-alpha, EF-TU, TUF-1; GTPase, alpha/beta structure, protein biosynthesis, translation; HET: GDP; 1.80A {Sulfolobus solfataricus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1skq_A* 3agj_A*
Probab=96.97 E-value=0.0006 Score=75.89 Aligned_cols=122 Identities=10% Similarity=0.044 Sum_probs=71.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.+||+.|+ ....+.|..++..+|++|+|||.++ ...- . ..+.+.+.++.+..+-. +.-.++|
T Consensus 84 ~~~~iiDtpG~-~~f~~~~~~~~~~aD~~ilVvDa~~-gsfe----~------~~~~~~qt~~~~~~~~~---~~~~~ii 148 (435)
T 1jny_A 84 YFFTIIDAPGH-RDFVKNMITGASQADAAILVVSAKK-GEYE----A------GMSVEGQTREHIILAKT---MGLDQLI 148 (435)
T ss_dssp CEEEECCCSSS-TTHHHHHHHTSSCCSEEEEEEECST-THHH----H------HHSTTCHHHHHHHHHHH---TTCTTCE
T ss_pred eEEEEEECCCc-HHHHHHHHhhhhhcCEEEEEEECCC-Cccc----c------ccccchHHHHHHHHHHH---cCCCeEE
Confidence 57999999999 7777889999999999999999985 2100 0 00111222333222211 1224699
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... |. +...+...+-+...+..+. .....+.+..+||.++++|.+.+
T Consensus 149 vviNK~Dl~~~~--------------~~--------~~~~~~~~~~i~~~~~~~~--~~~~~~~~i~iSA~~g~~v~e~~ 204 (435)
T 1jny_A 149 VAVNKMDLTEPP--------------YD--------EKRYKEIVDQVSKFMRSYG--FNTNKVRFVPVVAPSGDNITHKS 204 (435)
T ss_dssp EEEECGGGSSST--------------TC--------HHHHHHHHHHHHHHHHHTT--CCCTTCEEEECBTTTTBTTTBCC
T ss_pred EEEEcccCCCcc--------------cc--------HHHHHHHHHHHHHHHHHcC--CCcCCceEEEeecccCccccccc
Confidence 999999986420 10 0001222233333322221 11234678899999999997654
Q ss_pred H
Q 042025 806 K 806 (844)
Q Consensus 806 ~ 806 (844)
+
T Consensus 205 ~ 205 (435)
T 1jny_A 205 E 205 (435)
T ss_dssp S
T ss_pred c
Confidence 3
No 161
>1r5b_A Eukaryotic peptide chain release factor GTP-bindi subunit; translation termination, peptide release, GTPase, translatio; 2.35A {Schizosaccharomyces pombe} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1r5n_A* 1r5o_A* 3e20_A
Probab=96.93 E-value=0.00096 Score=75.15 Aligned_cols=36 Identities=6% Similarity=0.129 Sum_probs=23.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeeccc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSD 682 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSD 682 (844)
.+|.+||+.|+ ....+.+..++..+|++|+|||.++
T Consensus 121 ~~~~iiDtPGh-~~f~~~~~~~~~~aD~~ilVvDa~~ 156 (467)
T 1r5b_A 121 RRFSLLDAPGH-KGYVTNMINGASQADIGVLVISARR 156 (467)
T ss_dssp EEEEECCCCC------------TTSCSEEEEEEECST
T ss_pred eEEEEEECCCc-HHHHHHHHhhcccCCEEEEEEeCCc
Confidence 57999999999 7788888999999999999999885
No 162
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=96.92 E-value=0.00042 Score=77.48 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=44.9
Q ss_pred ceEEEEEeCC--------CCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNA--------KGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGG--------Q~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+++||++| + ...+..|..+++++++||||+|..+- .. ..-..+..++..
T Consensus 71 ~~~~liDT~G~~~~~~~~~-~~~~~~~~~~~~~ad~il~VvD~~~~----------------~~---~~d~~l~~~l~~- 129 (456)
T 4dcu_A 71 YDFNLIDTGGIDIGDEPFL-AQIRQQAEIAMDEADVIIFMVNGREG----------------VT---AADEEVAKILYR- 129 (456)
T ss_dssp SCCEEECCCC------CCH-HHHHHHHHHHHHHCSEEEEEEESSSC----------------SC---HHHHHHHHHHTT-
T ss_pred ceEEEEECCCCCCcchHHH-HHHHHHHHhhHhhCCEEEEEEeCCCC----------------CC---hHHHHHHHHHHH-
Confidence 4688999999 5 45567788899999999999996630 11 111223344443
Q ss_pred CCCCCcEEEEecccchhh
Q 042025 718 CFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfe 735 (844)
.+.|+||++||.|+.+
T Consensus 130 --~~~pvilV~NK~D~~~ 145 (456)
T 4dcu_A 130 --TKKPVVLAVNKLDNTE 145 (456)
T ss_dssp --CCSCEEEEEECC----
T ss_pred --cCCCEEEEEECccchh
Confidence 4789999999999864
No 163
>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1g7c_A* 1ije_A* 1ijf_A* 2b7b_A* 2b7c_A
Probab=96.83 E-value=0.0025 Score=71.63 Aligned_cols=36 Identities=6% Similarity=-0.050 Sum_probs=32.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeeccc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSD 682 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSD 682 (844)
..+.+||+.|+ ....+.+..++..+|++|||||.++
T Consensus 85 ~~~~iiDtPGh-~~f~~~~~~~~~~aD~~ilVvda~~ 120 (458)
T 1f60_A 85 YQVTVIDAPGH-RDFIKNMITGTSQADCAILIIAGGV 120 (458)
T ss_dssp EEEEEEECCCC-TTHHHHHHHSSSCCSEEEEEEECSH
T ss_pred ceEEEEECCCc-HHHHHHHHhhhhhCCEEEEEEeCCc
Confidence 47999999999 7777888889999999999999885
No 164
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=96.80 E-value=0.0019 Score=70.65 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=69.2
Q ss_pred CCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhh
Q 042025 658 MNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEK 737 (844)
Q Consensus 658 rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeK 737 (844)
...++.+.++++..++||+|+|++|++..+ .+.| +.+ +.+.|+||++||.|+..+.
T Consensus 57 e~f~~~l~~i~~~~~~il~VvD~~d~~~~~------------~~~l-------~~~-----~~~~p~ilV~NK~DL~~~~ 112 (368)
T 3h2y_A 57 DDFLRILNGIGKSDALVVKIVDIFDFNGSW------------LPGL-------HRF-----VGNNKVLLVGNKADLIPKS 112 (368)
T ss_dssp HHHHHHHHHHHHSCCEEEEEEETTSHHHHC------------CTTH-------HHH-----SSSSCEEEEEECGGGSCTT
T ss_pred HHHHHHHHHHhccCcEEEEEEECCCCcccH------------HHHH-------HHH-----hCCCcEEEEEEChhcCCcc
Confidence 356778889999999999999999876554 1222 222 2368999999999997531
Q ss_pred hhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHHHHHHHH
Q 042025 738 VNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFKYIREVL 812 (844)
Q Consensus 738 I~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~~V~e~I 812 (844)
. . .+.+.+++...+.... -+...++.+||.++.+|++.++++.+..
T Consensus 113 ~----------------------~---~~~~~~~l~~~~~~~g----~~~~~v~~iSA~~g~gi~~L~~~l~~~~ 158 (368)
T 3h2y_A 113 V----------------------K---HDKVKHWMRYSAKQLG----LKPEDVFLISAAKGQGIAELADAIEYYR 158 (368)
T ss_dssp S----------------------C---HHHHHHHHHHHHHHTT----CCCSEEEECCTTTCTTHHHHHHHHHHHH
T ss_pred c----------------------C---HHHHHHHHHHHHHHcC----CCcccEEEEeCCCCcCHHHHHhhhhhhc
Confidence 0 0 1334445543333221 1233578999999999999999997654
No 165
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=96.78 E-value=0.0034 Score=70.96 Aligned_cols=107 Identities=15% Similarity=0.231 Sum_probs=61.6
Q ss_pred ceEEEEEeCCCCCCCccc--------ceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCC
Q 042025 646 TKYQLIRVNAKGMNEGCK--------WVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHP 717 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~K--------W~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p 717 (844)
..+++||+.|+ +..... -..++.++|+||||+|.++- . .. +...+++.+
T Consensus 272 ~~v~liDT~G~-~~~~~~ve~~gi~~~~~~~~~aD~vl~VvD~s~~-------~--------~~---~~~~i~~~l---- 328 (462)
T 3geh_A 272 IPVQVLDTAGI-RETSDQVEKIGVERSRQAANTADLVLLTIDAATG-------W--------TT---GDQEIYEQV---- 328 (462)
T ss_dssp EEEEECC---------------------CCCCSCSEEEEEEETTTC-------S--------CH---HHHHHHHHH----
T ss_pred EEEEEEECCcc-ccchhHHHHHHHHHHhhhhhcCCEEEEEeccCCC-------C--------CH---HHHHHHHhc----
Confidence 57899999998 443322 23467899999999998851 0 11 113333333
Q ss_pred CCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecC
Q 042025 718 CFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARD 797 (844)
Q Consensus 718 ~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtD 797 (844)
.+.|+|+++||.|+..+.- ... . ..+. ....+..+||.+
T Consensus 329 --~~~piivV~NK~Dl~~~~~----~~~---~---------------------------~~~~-----~~~~~i~iSAkt 367 (462)
T 3geh_A 329 --KHRPLILVMNKIDLVEKQL----ITS---L---------------------------EYPE-----NITQIVHTAAAQ 367 (462)
T ss_dssp --TTSCEEEEEECTTSSCGGG----STT---C---------------------------CCCT-----TCCCEEEEBTTT
T ss_pred --cCCcEEEEEECCCCCcchh----hHH---H---------------------------HHhc-----cCCcEEEEECCC
Confidence 2369999999999875421 100 0 0000 112367789999
Q ss_pred CCCHHHHHHHHHHHHhhhh
Q 042025 798 RVTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 798 te~I~evF~~V~e~Ik~~~ 816 (844)
+.||++.|++|.+.+....
T Consensus 368 g~Gi~eL~~~i~~~~~~~~ 386 (462)
T 3geh_A 368 KQGIDSLETAILEIVQTGK 386 (462)
T ss_dssp TBSHHHHHHHHHHHHTTSS
T ss_pred CCCHHHHHHHHHHHHhccC
Confidence 9999999999988876543
No 166
>3izq_1 HBS1P, elongation factor 1 alpha-like protein; NO-GO mRNA decay, ribosomal protein,hydrolase; 9.50A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0018 Score=75.66 Aligned_cols=116 Identities=10% Similarity=0.035 Sum_probs=71.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccc--cccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDY--DQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP 723 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDY--Dq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp 723 (844)
..+.|||+.|+ ....+.+..++..++++|+|||.++- ... .+.+.+.++.+..+.. +...+
T Consensus 245 ~~~~iiDTPG~-e~f~~~~~~~~~~aD~~llVVDa~~g~~e~~-------------~~~~~qt~e~l~~~~~---lgi~~ 307 (611)
T 3izq_1 245 ANFTIVDAPGH-RDFVPNAIMGISQADMAILCVDCSTNAFESG-------------FDLDGQTKEHMLLASS---LGIHN 307 (611)
T ss_dssp CEEEEEECCSS-SCHHHHHTTTSSCCSEEEEEEECSHHHHHTT-------------CCTTSHHHHHHHHHHT---TTCCE
T ss_pred ceEEEEECCCC-cccHHHHHHHHhhcCceEEEEECCCCccccc-------------chhhhHHHHHHHHHHH---cCCCe
Confidence 57999999999 77888899999999999999999852 111 1111222222222222 22346
Q ss_pred EEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHH
Q 042025 724 FVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDE 803 (844)
Q Consensus 724 iILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~e 803 (844)
+||++||+|+.... +...+.+.+.+...+..+. .....+-+..+||+++.||.+
T Consensus 308 iIVVvNKiDl~~~~------------------------~~~~~ei~~~l~~~l~~~g--~~~~~~~~i~vSA~tG~gI~e 361 (611)
T 3izq_1 308 LIIAMNKMDNVDWS------------------------QQRFEEIKSKLLPYLVDIG--FFEDNINWVPISGFSGEGVYK 361 (611)
T ss_dssp EEEEEECTTTTTTC------------------------HHHHHHHHHHHHHHHHHHT--CCGGGCEEEECCTTTCTTTSS
T ss_pred EEEEEecccccchh------------------------HHHHHHHHHHHHHHHHhhc--ccccCccEEeeecccCCCccc
Confidence 99999999986410 0012333333443333332 112346688999999999976
Q ss_pred H
Q 042025 804 A 804 (844)
Q Consensus 804 v 804 (844)
.
T Consensus 362 l 362 (611)
T 3izq_1 362 I 362 (611)
T ss_dssp C
T ss_pred c
Confidence 5
No 167
>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli}
Probab=96.76 E-value=0.00094 Score=76.39 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=71.2
Q ss_pred eEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEE
Q 042025 647 KYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVL 726 (844)
Q Consensus 647 ~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiIL 726 (844)
.+.+||+.|+ ...+..|..++..+|++|+|||.++= . ...-.+.+.+ +.. .+.|+||
T Consensus 52 ~i~~iDTPGh-e~f~~~~~~~~~~aD~aILVVda~~g--~-------------~~qT~e~l~~---~~~----~~vPiIV 108 (501)
T 1zo1_I 52 MITFLDTPGH-AAFTSMRARGAQATDIVVLVVAADDG--V-------------MPQTIEAIQH---AKA----AQVPVVV 108 (501)
T ss_dssp CCCEECCCTT-TCCTTSBCSSSBSCSSEEEEEETTTB--S-------------CTTTHHHHHH---HHH----TTCCEEE
T ss_pred EEEEEECCCc-HHHHHHHHHHHhhCCEEEEEeecccC--c-------------cHHHHHHHHH---HHh----cCceEEE
Confidence 5789999999 78888899999999999999998751 0 0011122222 211 3689999
Q ss_pred EecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHH
Q 042025 727 ILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFK 806 (844)
Q Consensus 727 fLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~ 806 (844)
++||+|+......+ +.. .+.++. +....-+..+.+..+||.++.||++.|+
T Consensus 109 viNKiDl~~~~~~~--v~~--~l~~~~-------------------------~~~~~~~~~~~~v~vSAktG~gI~eLle 159 (501)
T 1zo1_I 109 AVNKIDKPEADPDR--VKN--ELSQYG-------------------------ILPEEWGGESQFVHVSAKAGTGIDELLD 159 (501)
T ss_dssp EEECSSSSTTCCCC--TTC--CCCCCC-------------------------CCTTCCSSSCEEEECCTTTCTTCTTHHH
T ss_pred EEEeccccccCHHH--HHH--HHHHhh-------------------------hhHHHhCCCccEEEEeeeeccCcchhhh
Confidence 99999996531111 100 010100 0000012346688999999999999998
Q ss_pred HHHH
Q 042025 807 YIRE 810 (844)
Q Consensus 807 ~V~e 810 (844)
++..
T Consensus 160 ~I~~ 163 (501)
T 1zo1_I 160 AILL 163 (501)
T ss_dssp HTTT
T ss_pred hhhh
Confidence 8764
No 168
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=96.76 E-value=0.0017 Score=65.46 Aligned_cols=73 Identities=11% Similarity=0.076 Sum_probs=46.1
Q ss_pred ceEEEEEeCCCC----------CCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHc
Q 042025 646 TKYQLIRVNAKG----------MNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIR 715 (844)
Q Consensus 646 ~~~~liDVGGQ~----------rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n 715 (844)
..+.|||+.|.. ...++.|..++.+++++|+|+|++.++.. ....+..-++.|..-.
T Consensus 78 ~~i~liDTpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~d~~~~~~~------------~~~~l~~~~~~~~~~~- 144 (239)
T 3lxx_A 78 TELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEE------------EHKATEKILKMFGERA- 144 (239)
T ss_dssp EEEEEEECCSCC-----CHHHHHHHHHHHHHTTTCCSEEEEEEETTCCSSH------------HHHHHHHHHHHHHHHH-
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEeeCCCCCHH------------HHHHHHHHHHHhhhhc-
Confidence 468899999841 12344566677889999999998864321 1233333333333221
Q ss_pred CCCCCCCcEEEEecccchhhh
Q 042025 716 HPCFKDTPFVLILNKYDLFEE 736 (844)
Q Consensus 716 ~p~f~~tpiILfLNK~DLfee 736 (844)
..|+||++||.|++..
T Consensus 145 -----~~~~iiv~nK~D~~~~ 160 (239)
T 3lxx_A 145 -----RSFMILIFTRKDDLGD 160 (239)
T ss_dssp -----GGGEEEEEECGGGC--
T ss_pred -----cceEEEEEeCCccCCc
Confidence 2489999999998764
No 169
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=96.75 E-value=0.0019 Score=65.87 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=68.6
Q ss_pred ceEEEEEeCCCCCCCccc-----------ceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEGCK-----------WVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMI 714 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~K-----------W~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~ 714 (844)
..+.+||+.|+ ...... +..++.+++++|||+|.+.+.. .....+..+..++
T Consensus 71 ~~i~iiDTpG~-~~~~~~~~~~~~~i~~~~~~~~~~~d~il~V~d~~~~~~----------------~~~~~~~~l~~~~ 133 (260)
T 2xtp_A 71 REIVIIDTPDM-FSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTS----------------QDQQAAQRVKEIF 133 (260)
T ss_dssp EEEEEEECCGG-GGSSCCCHHHHHHHHHHHHHHTTCCSEEEEEEETTCCCH----------------HHHHHHHHHHHHH
T ss_pred CEEEEEECcCC-CCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEeCCCCCH----------------HHHHHHHHHHHHh
Confidence 47899999998 332211 1236789999999999985211 1122334444444
Q ss_pred cCCCCCCCcEEEEec-ccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCc--EEEE
Q 042025 715 RHPCFKDTPFVLILN-KYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRK--LFVW 791 (844)
Q Consensus 715 n~p~f~~tpiILfLN-K~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rk--lyvh 791 (844)
... . ..|+||++| |.|+..+.+.. |..+. .+ +.+.+++. .+ ..+- +...
T Consensus 134 ~~~-~-~~~~i~vv~nK~Dl~~~~~~~-------~i~~~-------~~----~~~~~~~~----~~----~~~~~~~~~~ 185 (260)
T 2xtp_A 134 GED-A-MGHTIVLFTHKEDLNGGSLMD-------YMHDS-------DN----KALSKLVA----AC----GGRICAFNNR 185 (260)
T ss_dssp CGG-G-GGGEEEEEECGGGGTTCCHHH-------HHHHC-------CC----HHHHHHHH----HT----TTCEEECCTT
T ss_pred Cch-h-hccEEEEEEcccccCCccHHH-------HHHhc-------ch----HHHHHHHH----Hh----CCeEEEecCc
Confidence 321 1 346677776 99997532211 00000 00 11111111 11 1111 1115
Q ss_pred EEeecCCCCHHHHHHHHHHHHhh
Q 042025 792 QARARDRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 792 ~T~AtDte~I~evF~~V~e~Ik~ 814 (844)
.+||.++.++++.|++|.+.+..
T Consensus 186 ~~SA~~~~gv~~l~~~i~~~~~~ 208 (260)
T 2xtp_A 186 AEGSNQDDQVKELMDCIEDLLME 208 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHh
Confidence 68999999999999999998754
No 170
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=96.75 E-value=0.0015 Score=73.11 Aligned_cols=107 Identities=21% Similarity=0.184 Sum_probs=70.5
Q ss_pred eEEEEEeCCCCCCCcc-------cceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCC
Q 042025 647 KYQLIRVNAKGMNEGC-------KWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCF 719 (844)
Q Consensus 647 ~~~liDVGGQ~rseR~-------KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f 719 (844)
++.+||+.|+ ...+. +|..++.+++++|||+|.+. .....+-+..+.. .
T Consensus 84 ~l~liDTpG~-~d~~~l~~~~~~~~~~~l~~aD~vllVvD~~~-----------------~~~~~~~l~~l~~---~--- 139 (423)
T 3qq5_A 84 PVTLVDTPGL-DDVGELGRLRVEKARRVFYRADCGILVTDSAP-----------------TPYEDDVVNLFKE---M--- 139 (423)
T ss_dssp EEEEEECSST-TCCCTTCCCCHHHHHHHHTSCSEEEEECSSSC-----------------CHHHHHHHHHHHH---T---
T ss_pred eEEEEECcCC-CcccchhHHHHHHHHHHHhcCCEEEEEEeCCC-----------------hHHHHHHHHHHHh---c---
Confidence 6889999998 43332 35668899999999999731 1112222223222 2
Q ss_pred CCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCC
Q 042025 720 KDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRV 799 (844)
Q Consensus 720 ~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte 799 (844)
+.|+||++||.|+..+.. .+.+ ..+.. ...+-++.+||.++.
T Consensus 140 -~~piIvV~NK~Dl~~~~~--------------------------~~~~--------~~l~~---~~g~~v~~vSAktg~ 181 (423)
T 3qq5_A 140 -EIPFVVVVNKIDVLGEKA--------------------------EELK--------GLYES---RYEAKVLLVSALQKK 181 (423)
T ss_dssp -TCCEEEECCCCTTTTCCC--------------------------THHH--------HHSSC---CTTCCCCCCSSCCTT
T ss_pred -CCCEEEEEeCcCCCCccH--------------------------HHHH--------HHHHH---HcCCCEEEEECCCCC
Confidence 789999999999875310 0111 11111 112457789999999
Q ss_pred CHHHHHHHHHHHHhhh
Q 042025 800 TVDEAFKYIREVLKWD 815 (844)
Q Consensus 800 ~I~evF~~V~e~Ik~~ 815 (844)
+|++.|++|.+.+...
T Consensus 182 gI~eL~~~L~~~l~~~ 197 (423)
T 3qq5_A 182 GFDDIGKTISEILPGD 197 (423)
T ss_dssp STTTHHHHHHHHSCCC
T ss_pred CHHHHHHHHHHhhhhh
Confidence 9999999999998655
No 171
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=96.63 E-value=0.0096 Score=65.16 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=71.4
Q ss_pred ceEEEEEeCCCCCCCcccce-------eccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCC
Q 042025 646 TKYQLIRVNAKGMNEGCKWV-------EMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPC 718 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~-------~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~ 718 (844)
..+.+||..|+.+.....+. ..+..+|.|+||+|+++-+ ....+.+..+..++..-.
T Consensus 226 ~~v~l~DT~G~i~~lp~~lve~f~~tl~~~~~aD~il~VvD~s~~~----------------~~~~~~~~~~~~~L~~l~ 289 (364)
T 2qtf_A 226 RKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSE----------------NLLIETLQSSFEILREIG 289 (364)
T ss_dssp EEEEEEECCCBCSSCCGGGHHHHHHHHHGGGGSSEEEEEEETTSCH----------------HHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCchhcCCHHHHHHHHHHHHHHHhCCEEEEEEECCCCc----------------chHHHHHHHHHHHHHHhC
Confidence 46889999987221111111 2456889999999988521 112222333333333222
Q ss_pred CCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC
Q 042025 719 FKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR 798 (844)
Q Consensus 719 f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt 798 (844)
..+.|+|+++||.|+..... . ...+.+..+ .. .+. .....+..+||+++
T Consensus 290 ~~~~p~ilV~NK~Dl~~~~~-----~------------------~~~~~~~~l-~~---~l~----~~~~~~~~~SA~~g 338 (364)
T 2qtf_A 290 VSGKPILVTLNKIDKINGDL-----Y------------------KKLDLVEKL-SK---ELY----SPIFDVIPISALKR 338 (364)
T ss_dssp CCSCCEEEEEECGGGCCSCH-----H------------------HHHHHHHHH-HH---HHC----SCEEEEEECBTTTT
T ss_pred cCCCCEEEEEECCCCCCchH-----H------------------HHHHHHHHH-HH---Hhc----CCCCcEEEEECCCC
Confidence 35689999999999864210 0 001111111 11 110 12334688999999
Q ss_pred CCHHHHHHHHHHHHhhhh
Q 042025 799 VTVDEAFKYIREVLKWDD 816 (844)
Q Consensus 799 e~I~evF~~V~e~Ik~~~ 816 (844)
.++++.+++|.+.+....
T Consensus 339 ~gi~~L~~~I~~~l~~~~ 356 (364)
T 2qtf_A 339 TNLELLRDKIYQLATQLS 356 (364)
T ss_dssp BSHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHhcccC
Confidence 999999999998775543
No 172
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=96.61 E-value=0.0025 Score=66.13 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=20.5
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+++...+||+|+|.+++||||++.++
T Consensus 3 ~~~g~~~~I~vvG~~g~GKSTLin~L 28 (274)
T 3t5d_A 3 LGSGFEFTLMVVGESGLGKSTLINSL 28 (274)
T ss_dssp ----CEEEEEEEECTTSSHHHHHHHH
T ss_pred CcCccEEEEEEECCCCCCHHHHHHHH
Confidence 34556799999999999999999886
No 173
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=96.61 E-value=0.0047 Score=65.40 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=67.1
Q ss_pred ceEEEEEeCCCCC---------CCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGM---------NEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~r---------seR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..+.+||+.|+ . ..+..+..++.++|+++||+|.+++ . . ....+++.+..
T Consensus 56 ~~i~~iDTpG~-~~~~~~~l~~~~~~~~~~~l~~~D~vl~Vvd~~~~---~-------------~---~~~~i~~~l~~- 114 (301)
T 1ega_A 56 YQAIYVDTPGL-HMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRW---T-------------P---DDEMVLNKLRE- 114 (301)
T ss_dssp EEEEEESSSSC-CHHHHHHHHHHHTCCTTSCCCCEEEEEEEEETTCC---C-------------H---HHHHHHHHHHS-
T ss_pred eeEEEEECcCC-CccchhhHHHHHHHHHHHHHhcCCEEEEEEeCCCC---C-------------H---HHHHHHHHHHh-
Confidence 46889999998 4 2345567788999999999998751 1 0 11133333332
Q ss_pred CCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeec
Q 042025 717 PCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARAR 796 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~At 796 (844)
.+.|+||++||.|+...+ +...+.+. .+.... +- --+..+||.
T Consensus 115 ---~~~P~ilvlNK~D~~~~~----------------------------~~~~~~l~-~l~~~~----~~-~~~i~iSA~ 157 (301)
T 1ega_A 115 ---GKAPVILAVNKVDNVQEK----------------------------ADLLPHLQ-FLASQM----NF-LDIVPISAE 157 (301)
T ss_dssp ---SSSCEEEEEESTTTCCCH----------------------------HHHHHHHH-HHHTTS----CC-SEEEECCTT
T ss_pred ---cCCCEEEEEECcccCccH----------------------------HHHHHHHH-HHHHhc----Cc-CceEEEECC
Confidence 368999999999986410 00001111 111111 11 136678888
Q ss_pred CCCCHHHHHHHHHHHH
Q 042025 797 DRVTVDEAFKYIREVL 812 (844)
Q Consensus 797 Dte~I~evF~~V~e~I 812 (844)
++.+++..+++|.+.+
T Consensus 158 ~g~~v~~l~~~i~~~l 173 (301)
T 1ega_A 158 TGLNVDTIAAIVRKHL 173 (301)
T ss_dssp TTTTHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHhC
Confidence 8999988888877654
No 174
>3mca_A HBS1, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe}
Probab=96.60 E-value=0.00085 Score=78.01 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=58.9
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
..+.|||+.|+ ....+.+..++..+|++|+|||.++-. .+. | .+++.++++.+..+.. .+.| +
T Consensus 255 ~~i~iiDTPGh-~~f~~~~~~~~~~aD~alLVVDa~~g~-----~e~-g-----i~~~~qt~e~l~~~~~----lgip~i 318 (592)
T 3mca_A 255 KIYEIGDAPGH-RDFISGMIAGASSADFAVLVVDSSQNN-----FER-G-----FLENGQTREHAYLLRA----LGISEI 318 (592)
T ss_dssp ----CCEEESS-SEEEEECCC-------CCSEEEEEECC-----SST-T-----SCSCSSHHHHHHHHHH----SSCCCE
T ss_pred eEEEEEECCCh-HHHHHHHHHHHhhCCEEEEEEECCCCc-----ccc-c-----cccchHHHHHHHHHHH----cCCCeE
Confidence 47899999999 777888888999999999999998511 000 0 1111222222222222 1344 9
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHH-HhhhccCCCCcEEEEEEeecCCCCHH
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKF-KDLYASLTGRKLFVWQARARDRVTVD 802 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KF-l~L~~s~~~Rklyvh~T~AtDte~I~ 802 (844)
||++||+|+.... +...+...+.+...+ ..+. .....+-+..+||+++.||.
T Consensus 319 IvviNKiDl~~~~------------------------~~~~~~i~~el~~~l~~~~g--~~~~~~~ii~iSA~~G~gI~ 371 (592)
T 3mca_A 319 VVSVNKLDLMSWS------------------------EDRFQEIKNIVSDFLIKMVG--FKTSNVHFVPISAISGTNLI 371 (592)
T ss_dssp EEEEECGGGGTTC------------------------HHHHHHHHHHHHHHHTTTSC--CCGGGEEEEEECSSSCSSSC
T ss_pred EEEEecccccccc------------------------HHHHHHHHHHHHHHHHHhhC--CCccceEEEEEecccCcccc
Confidence 9999999986410 000222223333222 1111 11235678999999999997
No 175
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=96.51 E-value=0.0057 Score=67.98 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=68.8
Q ss_pred ceEEEEEeCCCCCCCcccc------------eeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEGCKW------------VEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW------------~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+.+||+.|+ +..+... ..+++.++++++|+|.++ .. .. +...+.+.+
T Consensus 228 ~~~~l~Dt~G~-~~~~~~~~~~~e~~~~~~~~~~i~~ad~vllv~d~~~-------~~--------~~---~~~~i~~~l 288 (439)
T 1mky_A 228 RKYVFVDTAGL-RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQ-------GI--------TR---QDQRMAGLM 288 (439)
T ss_dssp EEEEESSCSCC------------CCSCCHHHHHHHHHCSEEEEEEETTT-------CC--------CH---HHHHHHHHH
T ss_pred EEEEEEECCCC-ccccccchhhHHHHHHHHHHHHHhhCCEEEEEEeCCC-------CC--------CH---HHHHHHHHH
Confidence 46889999998 3322211 124456799999999874 00 10 112222222
Q ss_pred HcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEE
Q 042025 714 IRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQA 793 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T 793 (844)
.. .+.|++|++||.|+.++. ..+ .++..+.+..+|..+. ..-++++
T Consensus 289 ~~----~~~~~ilv~NK~Dl~~~~----~~~--------------------~~~~~~~~~~~~~~~~------~~~~~~~ 334 (439)
T 1mky_A 289 ER----RGRASVVVFNKWDLVVHR----EKR--------------------YDEFTKLFREKLYFID------YSPLIFT 334 (439)
T ss_dssp HH----TTCEEEEEEECGGGSTTG----GGC--------------------HHHHHHHHHHHCGGGT------TSCEEEC
T ss_pred HH----cCCCEEEEEECccCCCch----hhH--------------------HHHHHHHHHHHhccCC------CCcEEEE
Confidence 22 368999999999997531 000 1223333444433221 1237789
Q ss_pred eecCCCCHHHHHHHHHHHHhhh
Q 042025 794 RARDRVTVDEAFKYIREVLKWD 815 (844)
Q Consensus 794 ~AtDte~I~evF~~V~e~Ik~~ 815 (844)
||.++.+|++.|+.+.+.+...
T Consensus 335 SA~~g~gv~~l~~~i~~~~~~~ 356 (439)
T 1mky_A 335 SADKGWNIDRMIDAMNLAYASY 356 (439)
T ss_dssp BTTTTBSHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHhh
Confidence 9999999999999999877554
No 176
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=96.49 E-value=0.00041 Score=71.64 Aligned_cols=112 Identities=12% Similarity=0.083 Sum_probs=65.3
Q ss_pred ceEEEEEeCCCCC------------CCcccceeccCCccEEE-EEeecccccccccCCCCCCCcccccchHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGM------------NEGCKWVEMFEDVRVVV-FCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEM 712 (844)
Q Consensus 646 ~~~~liDVGGQ~r------------seR~KW~~~FedV~aII-FVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFes 712 (844)
.++.+||+.|+.. ..+..+..|+.+.+++| ||+|.++- . .+. +.+.+++.
T Consensus 125 ~~l~lvDtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~v~d~~~~---~------------~~~--~~~~~~~~ 187 (299)
T 2aka_B 125 LNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSD---L------------ANS--DALKIAKE 187 (299)
T ss_dssp CSEEEEECCCBCSSCCSSSCTTHHHHHHHHHHHHHTSTTEEEEEEEESSSC---G------------GGC--HHHHHHHH
T ss_pred CCceEEeCCCCCCCcCCCCCchHHHHHHHHHHHHHcCCCeEEEEEecCCcc---h------------hhh--HHHHHHHH
Confidence 4799999999732 12235666888877665 88887740 0 110 22233443
Q ss_pred HHcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcE-EEE
Q 042025 713 MIRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKL-FVW 791 (844)
Q Consensus 713 I~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rkl-yvh 791 (844)
+-. .+.|+|+++||.|+..+.- . .. +++..+ +. .. ...+ -++
T Consensus 188 ~~~----~~~~~i~V~NK~Dl~~~~~------~-------------------~~---~~~~~~---~~-~~-~~~~~~v~ 230 (299)
T 2aka_B 188 VDP----QGQRTIGVITKLDLMDEGT------D-------------------AR---DVLENK---LL-PL-RRGYIGVV 230 (299)
T ss_dssp HCT----TCSSEEEEEECGGGSCTTC------C-------------------CH---HHHTTC---SS-CC-TTCEEECC
T ss_pred hCC----CCCeEEEEEEccccCCCCc------h-------------------HH---HHHhCC---cC-cC-CCCcEEEE
Confidence 322 3689999999999875310 0 00 111110 11 01 1123 366
Q ss_pred EEeecCCCCHHHHHHHHHHH
Q 042025 792 QARARDRVTVDEAFKYIREV 811 (844)
Q Consensus 792 ~T~AtDte~I~evF~~V~e~ 811 (844)
.+||.++.++++.|+++.+.
T Consensus 231 ~~SA~~~~gi~~l~~~l~~~ 250 (299)
T 2aka_B 231 NRSQKDIDGKKDITAALAAE 250 (299)
T ss_dssp CCCCBCTTSCBCHHHHHHHH
T ss_pred CCChhhccccccHHHHHHHH
Confidence 78999999999999888763
No 177
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=96.49 E-value=0.0038 Score=77.80 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=71.1
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCc-E
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTP-F 724 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tp-i 724 (844)
.++.+||+.|+ ....+.+..++..+|++|+|||.++-. .....+.+.+... .+.| +
T Consensus 359 ~kI~IIDTPGH-edF~~~mi~gas~AD~aILVVDAtdGv---------------~~QTrEhL~ll~~-------lgIP~I 415 (1289)
T 3avx_A 359 RHYAHVDCPGH-ADYVKNMITGAAQMDGAILVVAATDGP---------------MPQTREHILLGRQ-------VGVPYI 415 (1289)
T ss_dssp CEEEEEECCCH-HHHHHHHHHTSCCCSEEEEEEETTTCS---------------CTTHHHHHHHHHH-------HTCSCE
T ss_pred EEEEEEECCCh-HHHHHHHHHHHhhCCEEEEEEcCCccC---------------cHHHHHHHHHHHH-------cCCCeE
Confidence 57999999999 666677778899999999999998511 1111122222221 2567 8
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCC------
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDR------ 798 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDt------ 798 (844)
||++||+|+.... . .+.. ..+++.+++ ..+. ..+..+-+..+||+++
T Consensus 416 IVVINKiDLv~d~-e--~le~------------------i~eEi~elL----k~~G--~~~~~vp~IpvSAktG~ng~~~ 468 (1289)
T 3avx_A 416 IVFLNKCDMVDDE-E--LLEL------------------VEMEVRELL----SQYD--FPGDDTPIVRGSALKALEGDAE 468 (1289)
T ss_dssp EEEEECCTTCCCH-H--HHHH------------------HHHHHHHHH----HHTT--SCTTTCCEEECCSTTTTTCCHH
T ss_pred EEEEeecccccch-h--hHHH------------------HHHHHHHHH----Hhcc--ccccceeEEEEEeccCCCCCcc
Confidence 9999999986410 0 0000 011222222 1111 1234566889999998
Q ss_pred --CCHHHHHHHHHHHH
Q 042025 799 --VTVDEAFKYIREVL 812 (844)
Q Consensus 799 --e~I~evF~~V~e~I 812 (844)
.+|.+.|++|.+.+
T Consensus 469 w~eGI~eLleaL~~~I 484 (1289)
T 3avx_A 469 WEAKILELAGFLDSYI 484 (1289)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred ccccchhhHhHHhhhc
Confidence 45777777776654
No 178
>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 PDB: 1elo_A 1ktv_A 2om7_L* 2wri_Y* 2wrk_Y* 2xsy_Y* 2xuy_Y* 2j7k_A* 2efg_A* 1jqm_B 1efg_A* 1fnm_A* 1pn6_A 2bm1_A* 2bm0_A* 2bv3_A* 3izp_E 1zn0_B 1jqs_C 2bcw_C ...
Probab=96.48 E-value=0.0087 Score=70.76 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=52.6
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...+..|..++..+|++|+|||.++..+ .+...+|..+.. .+.|++
T Consensus 77 ~~i~liDTPG~-~df~~~~~~~l~~aD~~ilVvDa~~g~~------------------~~t~~~~~~~~~----~~~p~i 133 (691)
T 1dar_A 77 HRINIIDTPGH-VDFTIEVERSMRVLDGAIVVFDSSQGVE------------------PQSETVWRQAEK----YKVPRI 133 (691)
T ss_dssp EEEEEECCCSS-TTCHHHHHHHHHHCSEEEEEEETTTCSC------------------HHHHHHHHHHHH----TTCCEE
T ss_pred eEEEEEECcCc-cchHHHHHHHHHHCCEEEEEEECCCCcc------------------hhhHHHHHHHHH----cCCCEE
Confidence 57999999999 6778889999999999999999986221 123344544443 268999
Q ss_pred EEecccchhhh
Q 042025 726 LILNKYDLFEE 736 (844)
Q Consensus 726 LfLNK~DLfee 736 (844)
|++||+|+...
T Consensus 134 vviNKiD~~~~ 144 (691)
T 1dar_A 134 AFANKMDKTGA 144 (691)
T ss_dssp EEEECTTSTTC
T ss_pred EEEECCCcccC
Confidence 99999999764
No 179
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=96.48 E-value=0.0035 Score=64.28 Aligned_cols=72 Identities=8% Similarity=0.066 Sum_probs=47.0
Q ss_pred ceEEEEEeCCCCCCCc--------ccceecc----CCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNEG--------CKWVEMF----EDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMM 713 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR--------~KW~~~F----edV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI 713 (844)
..+.|||+.|. ...+ +.+..++ .++++||||+|++.+.. --...++.+..+
T Consensus 70 ~~i~liDTPG~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~il~V~d~~~~~~----------------~~~~~~~~l~~~ 132 (247)
T 3lxw_A 70 CHVEVVDTPDI-FSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQLGRFTA----------------QDQQAVRQVRDM 132 (247)
T ss_dssp EEEEEEECCSC-SSTTHHHHSTTSHHHHHHHHHHTTCCSEEEEEEETTBCCH----------------HHHHHHHHHHHH
T ss_pred cEEEEEECCCC-CCCCCCcHHHHHHHHHHHHHhcCCCCCEEEEEEeCCCCCH----------------HHHHHHHHHHHH
Confidence 47899999996 2221 2233344 89999999999985321 112344555555
Q ss_pred HcCCCCCCCcEEEEecccchhh
Q 042025 714 IRHPCFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 714 ~n~p~f~~tpiILfLNK~DLfe 735 (844)
+. +...+.|+|||.||.|+..
T Consensus 133 ~~-~~~~~~~iilv~nK~Dl~~ 153 (247)
T 3lxw_A 133 FG-EDVLKWMVIVFTRKEDLAG 153 (247)
T ss_dssp HC-GGGGGGEEEEEECGGGGTT
T ss_pred hC-hhhhccEEEEEEchHhcCC
Confidence 54 2344689999999999855
No 180
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=96.42 E-value=0.0048 Score=72.59 Aligned_cols=66 Identities=12% Similarity=0.082 Sum_probs=49.3
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...+..|..++..++++|+|+|.++-. . .....++..+.. .+.|+|
T Consensus 74 ~~~nliDTpG~-~~f~~~~~~~l~~ad~~ilVvD~~~g~---------------~---~qt~~~~~~~~~----~~ip~i 130 (665)
T 2dy1_A 74 HRVFLLDAPGY-GDFVGEIRGALEAADAALVAVSAEAGV---------------Q---VGTERAWTVAER----LGLPRM 130 (665)
T ss_dssp EEEEEEECCCS-GGGHHHHHHHHHHCSEEEEEEETTTCS---------------C---HHHHHHHHHHHH----TTCCEE
T ss_pred EEEEEEeCCCc-cchHHHHHHHHhhcCcEEEEEcCCccc---------------c---hhHHHHHHHHHH----ccCCEE
Confidence 57889999999 677778899999999999999976410 1 123344444443 268999
Q ss_pred EEecccchh
Q 042025 726 LILNKYDLF 734 (844)
Q Consensus 726 LfLNK~DLf 734 (844)
|++||+|+.
T Consensus 131 lv~NKiD~~ 139 (665)
T 2dy1_A 131 VVVTKLDKG 139 (665)
T ss_dssp EEEECGGGC
T ss_pred EEecCCchh
Confidence 999999985
No 181
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=96.37 E-value=0.016 Score=62.60 Aligned_cols=111 Identities=16% Similarity=0.047 Sum_probs=68.8
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.|||+.|-+ . -.....+.+|.||||+|.+..++.. ... ..+.+.|++
T Consensus 172 ~~~iiiDTpGi~-~---~~~~~~~~aD~vl~V~d~~~~~~~~-----------~l~---------------~~~~~~p~i 221 (355)
T 3p32_A 172 FDVILIETVGVG-Q---SEVAVANMVDTFVLLTLARTGDQLQ-----------GIK---------------KGVLELADI 221 (355)
T ss_dssp CCEEEEEECSCS-S---HHHHHHTTCSEEEEEEESSTTCTTT-----------TCC---------------TTSGGGCSE
T ss_pred CCEEEEeCCCCC-c---HHHHHHHhCCEEEEEECCCCCccHH-----------HHH---------------HhHhhcCCE
Confidence 579999999862 2 2333458899999999976433211 000 112345899
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCc--EEEEEEeecCCCCHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRK--LFVWQARARDRVTVDE 803 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rk--lyvh~T~AtDte~I~e 803 (844)
|++||+|+..++- ++.....+...+..+. ..... .-+..+||+++++|++
T Consensus 222 vVlNK~Dl~~~~~--------------------------~~~~~~~l~~~l~~~~--~~~~~~~~~vi~iSA~~g~Gi~~ 273 (355)
T 3p32_A 222 VVVNKADGEHHKE--------------------------ARLAARELSAAIRLIY--PREALWRPPVLTMSAVEGRGLAE 273 (355)
T ss_dssp EEEECCCGGGHHH--------------------------HHHHHHHHHHHHHHHS--TTCCSCCCCEEEEBGGGTBSHHH
T ss_pred EEEECCCCcChhH--------------------------HHHHHHHHHHHHhhcc--ccccCCCCceEEEEcCCCCCHHH
Confidence 9999999865310 1122222333322221 11122 2378899999999999
Q ss_pred HHHHHHHHHhh
Q 042025 804 AFKYIREVLKW 814 (844)
Q Consensus 804 vF~~V~e~Ik~ 814 (844)
.+++|.+.+..
T Consensus 274 L~~~i~~~~~~ 284 (355)
T 3p32_A 274 LWDTVERHRQV 284 (355)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988755
No 182
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=96.28 E-value=0.0048 Score=62.37 Aligned_cols=27 Identities=15% Similarity=-0.081 Sum_probs=23.4
Q ss_pred EEEEEeecCCCCHHHHHHHHHHHHhhh
Q 042025 789 FVWQARARDRVTVDEAFKYIREVLKWD 815 (844)
Q Consensus 789 yvh~T~AtDte~I~evF~~V~e~Ik~~ 815 (844)
-++.+||.++.++++.|++|.+.+...
T Consensus 232 ~~~~~SA~~~~gi~~l~~~i~~~~~~~ 258 (262)
T 1yrb_A 232 RVLYLSAKTREGFEDLETLAYEHYCTC 258 (262)
T ss_dssp CCEECCTTTCTTHHHHHHHHHHHHHHH
T ss_pred cceEEEecCcccHHHHHHHHHHHhccc
Confidence 368899999999999999999887644
No 183
>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} PDB: 3j0e_H
Probab=96.11 E-value=0.016 Score=68.72 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=51.7
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
...+.+||+.|+ ...+..|..++..+|++|+|||.++-.+ .++..+|+.+.. .+.|+
T Consensus 81 ~~~i~liDTPG~-~df~~~~~~~l~~aD~aIlVvDa~~gv~------------------~qt~~~~~~~~~----~~ip~ 137 (704)
T 2rdo_7 81 PHRINIIDTPGH-VDFTIEVERSMRVLDGAVMVYCAVGGVQ------------------PQSETVWRQANK----YKVPR 137 (704)
T ss_pred ceeEEEEeCCCc-cchHHHHHHHHHHCCEEEEEEeCCCCCc------------------HHHHHHHHHHHH----cCCCE
Confidence 368999999999 6667788889999999999999985211 123344444332 36899
Q ss_pred EEEecccchhhh
Q 042025 725 VLILNKYDLFEE 736 (844)
Q Consensus 725 ILfLNK~DLfee 736 (844)
+||+||+|+...
T Consensus 138 ilviNKiD~~~~ 149 (704)
T 2rdo_7 138 IAFVNKMDRMGA 149 (704)
T ss_pred EEEEeCCCcccc
Confidence 999999998754
No 184
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=96.10 E-value=0.0068 Score=71.71 Aligned_cols=130 Identities=8% Similarity=0.137 Sum_probs=75.8
Q ss_pred eEEEEEeCCCCC--CCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 647 KYQLIRVNAKGM--NEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 647 ~~~liDVGGQ~r--seR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
.+.+||+.|.+. ..+..+..++.++|+||||+|.+.- . + ...+..+...+.. .+.|+
T Consensus 175 ~l~LiDTPGl~~~~~~~~~~~~~i~~aD~vL~Vvda~~~-------~--------s---~~e~~~l~~~l~~---~~~~i 233 (695)
T 2j69_A 175 GIEIVDSPGLNDTEARNELSLGYVNNCHAILFVMRASQP-------C--------T---LGERRYLENYIKG---RGLTV 233 (695)
T ss_dssp TEEEEECCCHHHHHTCHHHHTHHHHSSSEEEEEEETTST-------T--------C---HHHHHHHHHHTTT---SCCCE
T ss_pred CeEEEECCCCCchhhHHHHHHHHHHhCCEEEEEEeCCCc-------c--------c---hhHHHHHHHHHHh---hCCCE
Confidence 589999999621 1345677889999999999998741 0 0 1223344444432 25689
Q ss_pred EEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHH----HHHHhhhcc--CCCCcEEEEEEeec--
Q 042025 725 VLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVA----MKFKDLYAS--LTGRKLFVWQARAR-- 796 (844)
Q Consensus 725 ILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~----~KFl~L~~s--~~~Rklyvh~T~At-- 796 (844)
++++||.|+..... +.. + +.+ ..+.+...+. ......... .......++++||.
T Consensus 234 iiVlNK~Dl~~~~~----~~~-----e--------e~e-~l~~~~~~i~~~~~~~l~~~~~~~g~~~~~~~v~~vSAk~a 295 (695)
T 2j69_A 234 FFLVNAWDQVRESL----IDP-----D--------DVE-ELQASENRLRQVFNANLAEYCTVEGQNIYDERVFELSSIQA 295 (695)
T ss_dssp EEEEECGGGGGGGC----SST-----T--------CHH-HHHHHHHHHHHHHHHHHGGGGBSSSCBCGGGTEEECCHHHH
T ss_pred EEEEECcccccccc----cCh-----h--------hHH-HHHHHHHHHHHHHHHHHHHhhcccccccCCCcEEEEeChHH
Confidence 99999999976421 100 0 000 0122222232 222221110 00012247899999
Q ss_pred ------------CCCCHHHHHHHHHHHHhhh
Q 042025 797 ------------DRVTVDEAFKYIREVLKWD 815 (844)
Q Consensus 797 ------------Dte~I~evF~~V~e~Ik~~ 815 (844)
++.++.+.++++.+.+...
T Consensus 296 l~~~~~~~~~~~~~~Gi~~L~~~L~~~l~~~ 326 (695)
T 2j69_A 296 LRRRLKNPQADLDGTGFPKFMDSLNTFLTRE 326 (695)
T ss_dssp HHHHHHCTTCCCTTSSHHHHHHHHHHHHHHT
T ss_pred HHhhccCchhhhhccCHHHHHHHHHHHHHHh
Confidence 9999999999999877543
No 185
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=95.87 E-value=0.023 Score=60.23 Aligned_cols=92 Identities=20% Similarity=0.218 Sum_probs=55.7
Q ss_pred ceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhhcccc
Q 042025 664 WVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVNRVHL 743 (844)
Q Consensus 664 W~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~~spL 743 (844)
...++.++|.||+|+|+++ .+- ..+.+..-+..++. .+.|+||++||.|+..+. .+
T Consensus 73 ~r~~~~naD~vliV~d~~~-------p~~------s~~~l~~~l~~~~~-------~~~~~ilV~NK~DL~~~~----~v 128 (302)
T 2yv5_A 73 IRPKVANVDRVIIVETLKM-------PEF------NNYLLDNMLVVYEY-------FKVEPVIVFNKIDLLNEE----EK 128 (302)
T ss_dssp ETTEEESCCEEEEEECSTT-------TTC------CHHHHHHHHHHHHH-------TTCEEEEEECCGGGCCHH----HH
T ss_pred hHHHHHhcCEEEEEEECCC-------CCC------CHHHHHHHHHHHHh-------CCCCEEEEEEcccCCCcc----cc
Confidence 3358999999999999985 111 13333333333332 478999999999996431 00
Q ss_pred ccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHHHHH
Q 042025 744 STCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFKYIR 809 (844)
Q Consensus 744 s~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~~V~ 809 (844)
. ..+++.+ .|..+ .+-++.+||.++.+|++.|+++.
T Consensus 129 ~-------------------~~~~~~~----~~~~~-------g~~~~~~SA~~g~gi~~L~~~l~ 164 (302)
T 2yv5_A 129 K-------------------ELERWIS----IYRDA-------GYDVLKVSAKTGEGIDELVDYLE 164 (302)
T ss_dssp H-------------------HHHHHHH----HHHHT-------TCEEEECCTTTCTTHHHHHHHTT
T ss_pred H-------------------HHHHHHH----HHHHC-------CCeEEEEECCCCCCHHHHHhhcc
Confidence 0 0111111 12221 13478899999999998887764
No 186
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A 3sfs_W* 3zvo_Y* 3uoq_W*
Probab=95.69 E-value=0.0098 Score=68.30 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=50.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ...+..+..++..+|++|+|+|.++-. . .....+++.+.. .+.|+|
T Consensus 82 ~~i~liDTPG~-~df~~~~~~~l~~aD~~IlVvDa~~g~---------------~---~~t~~~~~~~~~----~~ipii 138 (529)
T 2h5e_A 82 CLVNLLDTPGH-EDFSEDTYRTLTAVDCCLMVIDAAKGV---------------E---DRTRKLMEVTRL----RDTPIL 138 (529)
T ss_dssp EEEEEECCCCS-TTCCHHHHHGGGGCSEEEEEEETTTCS---------------C---HHHHHHHHHHTT----TTCCEE
T ss_pred eEEEEEECCCC-hhHHHHHHHHHHHCCEEEEEEeCCccc---------------h---HHHHHHHHHHHH----cCCCEE
Confidence 57999999999 677778888999999999999988521 1 122344443322 368999
Q ss_pred EEecccchhh
Q 042025 726 LILNKYDLFE 735 (844)
Q Consensus 726 LfLNK~DLfe 735 (844)
+|+||+|+..
T Consensus 139 vviNK~Dl~~ 148 (529)
T 2h5e_A 139 TFMNKLDRDI 148 (529)
T ss_dssp EEEECTTSCC
T ss_pred EEEcCcCCcc
Confidence 9999999864
No 187
>2xex_A Elongation factor G; GTPase, translation, biosynthetic protein; 1.90A {Staphylococcus aureus}
Probab=95.44 E-value=0.011 Score=69.97 Aligned_cols=68 Identities=10% Similarity=0.123 Sum_probs=52.0
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|+ ......|..++..+|++|||+|.++-.+ .+...+|+.+.. .+.|+|
T Consensus 75 ~~i~liDTPG~-~df~~~~~~~l~~aD~~llVvDa~~g~~------------------~~~~~~~~~~~~----~~~p~i 131 (693)
T 2xex_A 75 HRVNIIDTPGH-VDFTVEVERSLRVLDGAVTVLDAQSGVE------------------PQTETVWRQATT----YGVPRI 131 (693)
T ss_dssp EEEEEECCCCC-SSCCHHHHHHHHHCSEEEEEEETTTBSC------------------HHHHHHHHHHHH----TTCCEE
T ss_pred eeEEEEECcCC-cchHHHHHHHHHHCCEEEEEECCCCCCc------------------HHHHHHHHHHHH----cCCCEE
Confidence 57999999999 6777888899999999999999885211 123444554443 268999
Q ss_pred EEecccchhhh
Q 042025 726 LILNKYDLFEE 736 (844)
Q Consensus 726 LfLNK~DLfee 736 (844)
|++||+|+...
T Consensus 132 lviNK~Dl~~~ 142 (693)
T 2xex_A 132 VFVNKMDKLGA 142 (693)
T ss_dssp EEEECTTSTTC
T ss_pred EEEECCCcccc
Confidence 99999999754
No 188
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=95.32 E-value=0.1 Score=51.15 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=64.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||..|+ ..... ++.-..+.+|+|+|.++.+. .+. .+.... +.|++
T Consensus 109 ~d~iiidt~G~-~~~~~---~~~~~~~~~i~vvd~~~~~~----------------~~~----~~~~~~------~~~~i 158 (221)
T 2wsm_A 109 CDLLLIENVGN-LICPV---DFDLGENYRVVMVSVTEGDD----------------VVE----KHPEIF------RVADL 158 (221)
T ss_dssp CSEEEEEEEEB-SSGGG---GCCCSCSEEEEEEEGGGCTT----------------HHH----HCHHHH------HTCSE
T ss_pred CCEEEEeCCCC-CCCCc---hhccccCcEEEEEeCCCcch----------------hhh----hhhhhh------hcCCE
Confidence 46889999986 21111 11124577899999875221 111 111111 36889
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
|++||+|+.... . .. .+.+.+++.. + +..+.++.+||.++.+++++|
T Consensus 159 iv~NK~Dl~~~~--~--~~--------------------~~~~~~~~~~----~-----~~~~~i~~~Sa~~g~gi~~l~ 205 (221)
T 2wsm_A 159 IVINKVALAEAV--G--AD--------------------VEKMKADAKL----I-----NPRAKIIEMDLKTGKGFEEWI 205 (221)
T ss_dssp EEEECGGGHHHH--T--CC--------------------HHHHHHHHHH----H-----CTTSEEEECBTTTTBTHHHHH
T ss_pred EEEecccCCcch--h--hH--------------------HHHHHHHHHH----h-----CCCCeEEEeecCCCCCHHHHH
Confidence 999999986531 0 00 2333343321 2 123567899999999999999
Q ss_pred HHHHHHHhh
Q 042025 806 KYIREVLKW 814 (844)
Q Consensus 806 ~~V~e~Ik~ 814 (844)
+++.+.+..
T Consensus 206 ~~l~~~~~~ 214 (221)
T 2wsm_A 206 DFLRGILNV 214 (221)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 999988754
No 189
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=95.01 E-value=0.13 Score=49.69 Aligned_cols=28 Identities=11% Similarity=0.015 Sum_probs=24.0
Q ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHh
Q 042025 786 RKLFVWQARARDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 786 Rklyvh~T~AtDte~I~evF~~V~e~Ik 813 (844)
..+....|+|+|+.++++++++|.+.+.
T Consensus 171 ~~~~~~~~Sal~~~~~~~l~~~l~~~~~ 198 (210)
T 1pui_A 171 GDVQVETFSSLKKQGVDKLRQKLDTWFS 198 (210)
T ss_dssp SCEEEEECBTTTTBSHHHHHHHHHHHHC
T ss_pred CCCceEEEeecCCCCHHHHHHHHHHHHh
Confidence 3466889999999999999999988764
No 190
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=94.76 E-value=0.022 Score=68.89 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=52.5
Q ss_pred CceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcE
Q 042025 645 LTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPF 724 (844)
Q Consensus 645 ~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpi 724 (844)
...+.+||+.|+ ...+..|..++..+|++|+|+|.++-.+ .++..+|..+.. .+.|+
T Consensus 97 ~~~i~liDTPG~-~df~~~~~~~l~~aD~ailVvDa~~g~~------------------~qt~~~~~~~~~----~~~p~ 153 (842)
T 1n0u_A 97 SFLINLIDSPGH-VDFSSEVTAALRVTDGALVVVDTIEGVC------------------VQTETVLRQALG----ERIKP 153 (842)
T ss_dssp EEEEEEECCCCC-CSSCHHHHHHHHTCSEEEEEEETTTBSC------------------HHHHHHHHHHHH----TTCEE
T ss_pred CceEEEEECcCc-hhhHHHHHHHHHhCCEEEEEEeCCCCCC------------------HHHHHHHHHHHH----cCCCe
Confidence 367999999999 7788889999999999999999885111 123444555443 36899
Q ss_pred EEEecccchhh
Q 042025 725 VLILNKYDLFE 735 (844)
Q Consensus 725 ILfLNK~DLfe 735 (844)
|||+||+|+..
T Consensus 154 ilviNK~D~~~ 164 (842)
T 1n0u_A 154 VVVINKVDRAL 164 (842)
T ss_dssp EEEEECHHHHH
T ss_pred EEEEECCCcch
Confidence 99999999974
No 191
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=94.64 E-value=0.02 Score=59.69 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=45.1
Q ss_pred ceEEEEEeCCCCCC-------------CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMN-------------EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEM 712 (844)
Q Consensus 646 ~~~~liDVGGQ~rs-------------eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFes 712 (844)
..+.+||+.|. .. .+..+..++.+++++|||+|.+.-+.. . .. .+.+++.
T Consensus 131 ~~~~lvDTpG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iilvvd~~~~~~~----~--------~~----~~~i~~~ 193 (315)
T 1jwy_B 131 VNLTLVDLPGI-TKVPVGDQPTDIEQQIRRMVMAYIKKQNAIIVAVTPANTDLA----N--------SD----ALQLAKE 193 (315)
T ss_dssp CSEEEEECCCC-C---------CSHHHHHHHHHHHHHSTTEEEEEEEESSSCST----T--------CS----HHHHHHH
T ss_pred CCcEEEECCCC-ccCCCCCCchhHHHHHHHHHHHHHcCCCeEEEEEEecCcchh----h--------hH----HHHHHHH
Confidence 47999999998 32 234566688899999999998642210 0 11 1223333
Q ss_pred HHcCCCCCCCcEEEEecccchhh
Q 042025 713 MIRHPCFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 713 I~n~p~f~~tpiILfLNK~DLfe 735 (844)
+-. .+.|+|+++||.|+..
T Consensus 194 ~~~----~~~~~i~v~NK~Dl~~ 212 (315)
T 1jwy_B 194 VDP----EGKRTIGVITKLDLMD 212 (315)
T ss_dssp HCS----SCSSEEEEEECTTSSC
T ss_pred hCC----CCCcEEEEEcCcccCC
Confidence 222 3689999999999875
No 192
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=94.45 E-value=0.08 Score=59.15 Aligned_cols=116 Identities=16% Similarity=0.226 Sum_probs=66.6
Q ss_pred eEEEEEeCCCCC--C----CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCC
Q 042025 647 KYQLIRVNAKGM--N----EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFK 720 (844)
Q Consensus 647 ~~~liDVGGQ~r--s----eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~ 720 (844)
.+.++|+.|... . ....+....+.++.+|+++|++ +.. ...+..-...+..+. +.+.
T Consensus 206 ~~~l~DtpGli~~a~~~~~L~~~fl~~~era~~lL~vvDls--~~~-------------~~~ls~g~~el~~la--~aL~ 268 (416)
T 1udx_A 206 RFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA--DEP-------------LKTLETLRKEVGAYD--PALL 268 (416)
T ss_dssp EEEEEECCCCCCCGGGSCCSCHHHHHHHTSSSEEEEEEETT--SCH-------------HHHHHHHHHHHHHHC--HHHH
T ss_pred eEEEEeccccccchhhhhhhhHHHHHHHHHHHhhhEEeCCc--cCC-------------HHHHHHHHHHHHHHh--HHhh
Confidence 567888877621 1 1112222345799999999997 222 122222222222221 1233
Q ss_pred CCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCC
Q 042025 721 DTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVT 800 (844)
Q Consensus 721 ~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~ 800 (844)
+.|.||++||.|+.... . .+. +...+.. +.+-+..+||.++++
T Consensus 269 ~~P~ILVlNKlDl~~~~-----~---------------------~~~----l~~~l~~-------~g~~vi~iSA~~g~g 311 (416)
T 1udx_A 269 RRPSLVALNKVDLLEEE-----A---------------------VKA----LADALAR-------EGLAVLPVSALTGAG 311 (416)
T ss_dssp HSCEEEEEECCTTSCHH-----H---------------------HHH----HHHHHHT-------TTSCEEECCTTTCTT
T ss_pred cCCEEEEEECCChhhHH-----H---------------------HHH----HHHHHHh-------cCCeEEEEECCCccC
Confidence 46899999999986420 0 111 1111111 123478899999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 042025 801 VDEAFKYIREVLKWDD 816 (844)
Q Consensus 801 I~evF~~V~e~Ik~~~ 816 (844)
|++.|++|.+.+....
T Consensus 312 i~eL~~~i~~~l~~~~ 327 (416)
T 1udx_A 312 LPALKEALHALVRSTP 327 (416)
T ss_dssp HHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999986543
No 193
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=94.15 E-value=0.15 Score=55.17 Aligned_cols=112 Identities=13% Similarity=-0.006 Sum_probs=62.4
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.++|..|. . ..+....+.++.++||+|.++.+. ...+ ...+ .+.|.+
T Consensus 167 ~~~iliDT~Gi-~---~~~~~l~~~~d~vl~V~d~~~~~~--------------~~~i------~~~i------l~~~~i 216 (349)
T 2www_A 167 YDIILIETVGV-G---QSEFAVADMVDMFVLLLPPAGGDE--------------LQGI------KRGI------IEMADL 216 (349)
T ss_dssp CSEEEEECCCC------CHHHHHTTCSEEEEEECCC--------------------------------------CCSCSE
T ss_pred CCEEEEECCCc-c---hhhhhHHhhCCEEEEEEcCCcchh--------------HHHh------HHHH------HhcCCE
Confidence 57899999987 2 235666789999999999875211 0000 0112 134778
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAF 805 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF 805 (844)
+++||.|+.... . +......+......+.........-+.++||++++++++.+
T Consensus 217 vVlNK~Dl~~~~----~----------------------~~~~~~~l~~~l~~~~~~a~~~~~~vi~iSA~~g~Gi~~L~ 270 (349)
T 2www_A 217 VAVTKSDGDLIV----P----------------------ARRIQAEYVSALKLLRKRSQVWKPKVIRISARSGEGISEMW 270 (349)
T ss_dssp EEECCCSGGGHH----H----------------------HHHHHHHHHHHHTTCC-----CCCEEEECCTTTCTTHHHHH
T ss_pred EEEeeecCCCch----h----------------------HHHHHHHHHHHHHhcCccccCCCceEEEEecCCCCCHHHHH
Confidence 999999986420 0 01111111111111110000012246779999999999999
Q ss_pred HHHHHHHh
Q 042025 806 KYIREVLK 813 (844)
Q Consensus 806 ~~V~e~Ik 813 (844)
++|.+.+.
T Consensus 271 ~~I~~~~~ 278 (349)
T 2www_A 271 DKMKDFQD 278 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 194
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=94.07 E-value=0.1 Score=56.13 Aligned_cols=110 Identities=12% Similarity=0.052 Sum_probs=63.2
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
..+.+||+.|. ..... .....+|.+|||+|.+..++.- .... ... +.|.+
T Consensus 149 ~~i~liDTpG~-~~~~~---~~~~~aD~vl~Vvd~~~~~~~~-----------~l~~---------~~~------~~p~i 198 (341)
T 2p67_A 149 YDVVIVETVGV-GQSET---EVARMVDCFISLQIAGGGDDLQ-----------GIKK---------GLM------EVADL 198 (341)
T ss_dssp CSEEEEEEECC-TTHHH---HHHTTCSEEEEEECC------C-----------CCCH---------HHH------HHCSE
T ss_pred CCEEEEeCCCc-cchHH---HHHHhCCEEEEEEeCCccHHHH-----------HHHH---------hhh------cccCE
Confidence 57999999997 32211 2457899999999987644311 0110 111 35789
Q ss_pred EEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCC--cEEEEEEeecCCCCHHH
Q 042025 726 LILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGR--KLFVWQARARDRVTVDE 803 (844)
Q Consensus 726 LfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~R--klyvh~T~AtDte~I~e 803 (844)
+++||+|+.... . +..+..-+...+ .+... ... ...+..+||.+++++++
T Consensus 199 vv~NK~Dl~~~~----~----------------------~~~~~~~l~~~l-~~~~~-~~~~~~~~vi~iSA~~g~gi~~ 250 (341)
T 2p67_A 199 IVINKDDGDNHT----N----------------------VAIARHMYESAL-HILRR-KYDEWQPRVLTCSALEKRGIDE 250 (341)
T ss_dssp EEECCCCTTCHH----H----------------------HHHHHHHHHHHH-HHSCC-SBTTBCCEEEECBGGGTBSHHH
T ss_pred EEEECCCCCChH----H----------------------HHHHHHHHHHHH-Hhccc-cccCCCCcEEEeeCCCCCCHHH
Confidence 999999986431 0 111112222222 22110 011 22467899999999999
Q ss_pred HHHHHHHHHh
Q 042025 804 AFKYIREVLK 813 (844)
Q Consensus 804 vF~~V~e~Ik 813 (844)
.+++|.+.+.
T Consensus 251 L~~~l~~~~~ 260 (341)
T 2p67_A 251 IWHAIIDFKT 260 (341)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 195
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=94.00 E-value=0.031 Score=57.51 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=43.7
Q ss_pred ceEEEEEeCCCCCCCcccceeccC---------CccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFE---------DVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~Fe---------dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
..+.+||+.|+ ...+.....+++ ++++||||+++.... . .+--.+.++.+...+..
T Consensus 84 ~~l~liDTpG~-~~~~~~~~~~~~~i~~~l~~~~~~~il~V~~~d~~~--~------------~~~~~~~~~~l~~~~~~ 148 (262)
T 3def_A 84 FTINIIDTPGL-VEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYA--V------------DELDKQVVIAITQTFGK 148 (262)
T ss_dssp EEEEEEECCCS-EETTEECHHHHHHHHHHTTTCEECEEEEEEESSCSC--C------------CHHHHHHHHHHHHHHCG
T ss_pred eeEEEEECCCC-CCcccchHHHHHHHHHHHhcCCCCEEEEEEcCCCCC--C------------CHHHHHHHHHHHHHhch
Confidence 57999999999 444333333333 789999998876421 0 11112334444444432
Q ss_pred CCCCCCcEEEEecccchh
Q 042025 717 PCFKDTPFVLILNKYDLF 734 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLf 734 (844)
.. ..|++|++||.|+.
T Consensus 149 ~~--~~~~ivv~nK~Dl~ 164 (262)
T 3def_A 149 EI--WCKTLLVLTHAQFS 164 (262)
T ss_dssp GG--GGGEEEEEECTTCC
T ss_pred hh--hcCEEEEEeCcccC
Confidence 11 24899999999985
No 196
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=93.88 E-value=0.069 Score=56.30 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=62.4
Q ss_pred CCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhh
Q 042025 658 MNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEK 737 (844)
Q Consensus 658 rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeK 737 (844)
...++......+.+|+||+|+|..+ ... ..|. .++.++ .+.|.+|++||.||....
T Consensus 11 ~ka~~~~~~~l~~aDvVl~VvDAr~-------p~~------~~~~------~l~~~l-----~~kp~ilVlNK~DL~~~~ 66 (282)
T 1puj_A 11 AKARREVTEKLKLIDIVYELVDARI-------PMS------SRNP------MIEDIL-----KNKPRIMLLNKADKADAA 66 (282)
T ss_dssp THHHHHHHHHGGGCSEEEEEEETTS-------TTT------TSCH------HHHHHC-----SSSCEEEEEECGGGSCHH
T ss_pred HHHHHHHHHHHhhCCEEEEEEeCCC-------CCc------cCCH------HHHHHH-----CCCCEEEEEECcccCCHH
Confidence 3455666677889999999999885 211 1332 223333 578999999999996421
Q ss_pred hhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCCCCcEEEEEEeecCCCCHHHHHHHHHHHHhhh
Q 042025 738 VNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLTGRKLFVWQARARDRVTVDEAFKYIREVLKWD 815 (844)
Q Consensus 738 I~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~~Rklyvh~T~AtDte~I~evF~~V~e~Ik~~ 815 (844)
. .+...+|+ ... .+-+.+++|.++.++++.++++.+.+...
T Consensus 67 ~--------------------------~~~~~~~~----~~~-------g~~~i~iSA~~~~gi~~L~~~i~~~l~~~ 107 (282)
T 1puj_A 67 V--------------------------TQQWKEHF----ENQ-------GIRSLSINSVNGQGLNQIVPASKEILQEK 107 (282)
T ss_dssp H--------------------------HHHHHHHH----HTT-------TCCEEECCTTTCTTGGGHHHHHHHHHHHH
T ss_pred H--------------------------HHHHHHHH----Hhc-------CCcEEEEECCCcccHHHHHHHHHHHHHHH
Confidence 0 12222222 111 12367789999999999999888877543
No 197
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=93.83 E-value=0.028 Score=61.19 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..|+|||||++++
T Consensus 35 ~~~~~I~vvG~~g~GKSTLln~L 57 (361)
T 2qag_A 35 GFEFTLMVVGESGLGKSTLINSL 57 (361)
T ss_dssp CCEECEEECCCTTSCHHHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHHHH
Confidence 45789999999999999999875
No 198
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=93.35 E-value=0.039 Score=53.46 Aligned_cols=23 Identities=26% Similarity=0.496 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+|++|+|.+++||||+++++
T Consensus 27 ~~~~kv~lvG~~g~GKSTLl~~l 49 (191)
T 1oix_A 27 DYLFKVVLIGDSGVGKSNLLSRF 49 (191)
T ss_dssp SEEEEEEEEECTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 34689999999999999999975
No 199
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=93.31 E-value=0.046 Score=49.71 Aligned_cols=21 Identities=33% Similarity=0.471 Sum_probs=18.7
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+||+++|.+++||||+++++
T Consensus 3 ~~~i~v~G~~~~GKssl~~~l 23 (166)
T 2ce2_X 3 EYKLVVVGAGGVGKSALTIQL 23 (166)
T ss_dssp EEEEEEEESTTSSHHHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHH
Confidence 579999999999999997765
No 200
>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2
Probab=93.29 E-value=0.04 Score=61.03 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=24.4
Q ss_pred ceEEEEEeCCCCC------CCcccceeccCCccEEEEEeecccc
Q 042025 646 TKYQLIRVNAKGM------NEGCKWVEMFEDVRVVVFCVALSDY 683 (844)
Q Consensus 646 ~~~~liDVGGQ~r------seR~KW~~~FedV~aIIFVVdLSDY 683 (844)
..+++||+.|+.. ....++..++.++|+||||+|.++-
T Consensus 71 ~~i~lvDtpG~~~~a~~~~~l~~~~l~~i~~aD~il~VvD~~~~ 114 (397)
T 1wxq_A 71 IPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGK 114 (397)
T ss_dssp EEEEEEECC---------------CCCSSTTCSEEEEEEETTCC
T ss_pred EEEEEEECCCcccchhhhhhHHHHHHHHHhcCCEEEEEEecccc
Confidence 4688999999721 1224455678999999999999863
No 201
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=93.17 E-value=0.058 Score=58.07 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=47.9
Q ss_pred ceEEEEEeCCCCCCC-------------cccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHH
Q 042025 646 TKYQLIRVNAKGMNE-------------GCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEM 712 (844)
Q Consensus 646 ~~~~liDVGGQ~rse-------------R~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFes 712 (844)
..+++||+.|+ ... +.....|+.++++||+||+.+.-+. .+ .+.+.+++.
T Consensus 136 ~~l~lvDtPG~-~~~~~~~q~~~~~~~~~~~~~~~i~~~d~iilvv~~~~~~~--------------~~--~~~~~l~~~ 198 (360)
T 3t34_A 136 VNLTLIDLPGL-TKVAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDL--------------AT--SDAIKISRE 198 (360)
T ss_dssp CSEEEEECCCB-CSSCCTTCCSSHHHHHHHHHHHHHHSSSEEEEEEEETTSCG--------------GG--CHHHHHHHH
T ss_pred CCeEEEECCCC-CcCCcCCCchhHHHHHHHHHHHHhhcCCeEEEEeecccCCc--------------CC--HHHHHHHHH
Confidence 46999999998 332 4455678899999999998764221 11 233444444
Q ss_pred HHcCCCCCCCcEEEEecccchhhh
Q 042025 713 MIRHPCFKDTPFVLILNKYDLFEE 736 (844)
Q Consensus 713 I~n~p~f~~tpiILfLNK~DLfee 736 (844)
+.. .+.++|+++||.|+..+
T Consensus 199 ~~~----~~~~~i~V~nK~Dl~~~ 218 (360)
T 3t34_A 199 VDP----SGDRTFGVLTKIDLMDK 218 (360)
T ss_dssp SCT----TCTTEEEEEECGGGCCT
T ss_pred hcc----cCCCEEEEEeCCccCCC
Confidence 422 35799999999999754
No 202
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=93.17 E-value=0.044 Score=53.52 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=19.5
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
....+.+||+++|..++|||||+.++
T Consensus 25 ~~~~~~~ki~vvG~~~~GKSsLi~~l 50 (204)
T 4gzl_A 25 YFQGQAIKCVVVGDGAVGKTCLLISY 50 (204)
T ss_dssp -----CEEEEEEESTTSSHHHHHHHH
T ss_pred hhcCCeEEEEEECcCCCCHHHHHHHH
Confidence 34467899999999999999999654
No 203
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=93.01 E-value=0.049 Score=52.31 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=20.7
Q ss_pred hhhhhhcceeeEEEeeccCCChhhHHHHH
Q 042025 420 PNYLEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 420 d~~Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+......+.+||+|+|..++|||||++++
T Consensus 13 ~~~~~~~~~~ki~vvG~~~vGKTsLi~~l 41 (187)
T 3c5c_A 13 NLYFQGPLEVNLAILGRRGAGKSALTVKF 41 (187)
T ss_dssp -------CEEEEEEECCTTSSHHHHHHHH
T ss_pred hHHhCCCceEEEEEECCCCCcHHHHHHHH
Confidence 34455577899999999999999999876
No 204
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=92.97 E-value=0.048 Score=50.31 Aligned_cols=23 Identities=22% Similarity=0.283 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+++|..++|||||++++
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l 26 (170)
T 1z08_A 4 AYSFKVVLLGEGCVGKTSLVLRY 26 (170)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999874
No 205
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=92.95 E-value=0.047 Score=50.27 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=21.0
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+++|..++||||+++++
T Consensus 4 ~~~~~i~v~G~~~~GKSsli~~l 26 (170)
T 1z0j_A 4 LRELKVCLLGDTGVGKSSIMWRF 26 (170)
T ss_dssp EEEEEEEEECCTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 45689999999999999999987
No 206
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=92.93 E-value=0.045 Score=51.55 Aligned_cols=25 Identities=36% Similarity=0.462 Sum_probs=21.8
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+.+..+||+++|..++|||||+..+
T Consensus 3 ~~~~~~ki~v~G~~~~GKSsli~~l 27 (208)
T 3clv_A 3 EKKSSYKTVLLGESSVGKSSIVLRL 27 (208)
T ss_dssp CCCSSEEEEEECCTTSSHHHHHHHH
T ss_pred CCCcceEEEEECCCCCCHHHHHHHH
Confidence 3456799999999999999999875
No 207
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=92.91 E-value=0.048 Score=50.64 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=21.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
...+||+++|..++|||||++++.
T Consensus 13 ~~~~~i~v~G~~~~GKSsli~~l~ 36 (179)
T 1z0f_A 13 SYIFKYIIIGDMGVGKSCLLHQFT 36 (179)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHH
T ss_pred ccceEEEEECCCCCCHHHHHHHHH
Confidence 457899999999999999999864
No 208
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=92.86 E-value=0.053 Score=50.56 Aligned_cols=24 Identities=17% Similarity=0.283 Sum_probs=21.4
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+.+||+++|..++|||||++++.
T Consensus 4 ~~~~ki~v~G~~~~GKssl~~~l~ 27 (178)
T 2hxs_A 4 MRQLKIVVLGDGASGKTSLTTCFA 27 (178)
T ss_dssp CCEEEEEEECCTTSSHHHHHHHHH
T ss_pred CceEEEEEECcCCCCHHHHHHHHH
Confidence 457899999999999999999864
No 209
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=92.81 E-value=0.053 Score=49.94 Aligned_cols=21 Identities=43% Similarity=0.621 Sum_probs=19.3
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+||+|+|..++||||+++++
T Consensus 2 ~~ki~~vG~~~~GKSsli~~l 22 (166)
T 3q72_A 2 VYKVLLLGAPGVGKSALARIF 22 (166)
T ss_dssp CCEEEEEESTTSSHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999875
No 210
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=92.79 E-value=0.052 Score=52.56 Aligned_cols=23 Identities=26% Similarity=0.491 Sum_probs=20.4
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..+|++|+|.+|+||||+++.+-
T Consensus 4 ~~~kv~lvG~~g~GKSTLl~~l~ 26 (199)
T 2f9l_A 4 YLFKVVLIGDSGVGKSNLLSRFT 26 (199)
T ss_dssp EEEEEEEESSTTSSHHHHHHHHH
T ss_pred ceEEEEEECcCCCCHHHHHHHHh
Confidence 36899999999999999998763
No 211
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=92.76 E-value=0.057 Score=49.89 Aligned_cols=23 Identities=39% Similarity=0.748 Sum_probs=20.9
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+++|..++|||||++++
T Consensus 5 ~~~~~i~v~G~~~~GKssl~~~l 27 (171)
T 1upt_A 5 TREMRILILGLDGAGKTTILYRL 27 (171)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHH
T ss_pred CCccEEEEECCCCCCHHHHHHHH
Confidence 45689999999999999999987
No 212
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=92.75 E-value=0.057 Score=51.39 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=22.0
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+..||+|+|..++||||++.++
T Consensus 19 ~~~~~~~i~v~G~~~~GKSsli~~l 43 (195)
T 1svi_A 19 PEGGLPEIALAGRSNVGKSSFINSL 43 (195)
T ss_dssp CCSCCCEEEEEEBTTSSHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHH
Confidence 3456899999999999999999876
No 213
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=92.74 E-value=0.054 Score=49.71 Aligned_cols=21 Identities=38% Similarity=0.476 Sum_probs=19.5
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+||+++|..++||||+++++
T Consensus 3 ~~~i~v~G~~~~GKssli~~l 23 (170)
T 1ek0_A 3 SIKLVLLGEAAVGKSSIVLRF 23 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999876
No 214
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=92.70 E-value=0.06 Score=49.91 Aligned_cols=23 Identities=22% Similarity=0.423 Sum_probs=20.5
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..+||+|+|..++|||||++++.
T Consensus 3 ~~~ki~i~G~~~vGKSsl~~~l~ 25 (175)
T 2nzj_A 3 ALYRVVLLGDPGVGKTSLASLFA 25 (175)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHH
T ss_pred eEEEEEEECCCCccHHHHHHHHh
Confidence 56899999999999999998753
No 215
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=92.69 E-value=0.06 Score=49.51 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=20.5
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+.+||+++|..++||||+++++.
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~ 24 (172)
T 2erx_A 2 NDYRVAVFGAGGVGKSSLVLRFV 24 (172)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHH
Confidence 46899999999999999998863
No 216
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=92.68 E-value=0.059 Score=50.98 Aligned_cols=22 Identities=36% Similarity=0.543 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..||+|+|.+++|||||++++
T Consensus 6 ~~~~i~lvG~~gvGKStL~~~l 27 (188)
T 2wjg_A 6 KSYEIALIGNPNVGKSTIFNAL 27 (188)
T ss_dssp CEEEEEEECSTTSSHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHH
Confidence 4589999999999999999986
No 217
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=92.66 E-value=0.056 Score=49.59 Aligned_cols=23 Identities=30% Similarity=0.335 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+++|..++|||||++++
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l 26 (170)
T 1r2q_A 4 ICQFKLVLLGESAVGKSSLVLRF 26 (170)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHH
Confidence 35689999999999999999876
No 218
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=92.58 E-value=0.058 Score=50.42 Aligned_cols=23 Identities=39% Similarity=0.481 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 10 ~~~~ki~v~G~~~~GKSsli~~l 32 (181)
T 2efe_B 10 SINAKLVLLGDVGAGKSSLVLRF 32 (181)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHH
T ss_pred ccceEEEEECcCCCCHHHHHHHH
Confidence 45689999999999999999876
No 219
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=92.55 E-value=0.067 Score=49.19 Aligned_cols=23 Identities=30% Similarity=0.544 Sum_probs=20.5
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..+||+++|..++||||++.++.
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~ 24 (170)
T 1g16_A 2 SIMKILLIGDSGVGKSCLLVRFV 24 (170)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHH
T ss_pred CceEEEEECcCCCCHHHHHHHHH
Confidence 46899999999999999998864
No 220
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=92.54 E-value=0.064 Score=49.56 Aligned_cols=21 Identities=38% Similarity=0.534 Sum_probs=19.5
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+||+++|..++||||+++++
T Consensus 2 ~~ki~ivG~~~~GKSsli~~l 22 (169)
T 3q85_A 2 VFKVMLVGESGVGKSTLAGTF 22 (169)
T ss_dssp EEEEEEECSTTSSHHHHHHHH
T ss_pred cEEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999876
No 221
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=92.47 E-value=0.059 Score=50.43 Aligned_cols=25 Identities=12% Similarity=0.210 Sum_probs=20.1
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+.+||+++|..++||||+++++
T Consensus 4 ~~~~~~ki~v~G~~~~GKssl~~~~ 28 (182)
T 3bwd_D 4 SASRFIKCVTVGDGAVGKTCLLISY 28 (182)
T ss_dssp ---CCCEEEEECSTTSSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHH
Confidence 3456789999999999999999765
No 222
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=92.47 E-value=0.068 Score=50.83 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=20.3
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+...+||+++|..++|||||++++
T Consensus 4 ~~~~~ki~v~G~~~vGKSsli~~l 27 (184)
T 1m7b_A 4 QNVKCKIVVVGDSQCGKTALLHVF 27 (184)
T ss_dssp --CEEEEEEEESTTSSHHHHHHHH
T ss_pred CceEEEEEEECCCCCCHHHHHHHH
Confidence 356789999999999999999874
No 223
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=92.44 E-value=0.056 Score=51.85 Aligned_cols=23 Identities=43% Similarity=0.440 Sum_probs=19.3
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-++|+|.+||||||++|.+--+.
T Consensus 11 ~i~l~G~~GsGKSTl~~~La~~~ 33 (191)
T 1zp6_A 11 ILLLSGHPGSGKSTIAEALANLP 33 (191)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCS
T ss_pred EEEEECCCCCCHHHHHHHHHhcc
Confidence 58899999999999999884333
No 224
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=92.43 E-value=0.06 Score=50.17 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=21.0
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+++|..++|||||++++
T Consensus 5 ~~~~~i~v~G~~~~GKSsli~~l 27 (177)
T 1wms_A 5 SSLFKVILLGDGGVGKSSLMNRY 27 (177)
T ss_dssp EEEEEEEEECCTTSSHHHHHHHH
T ss_pred cceeEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999986
No 225
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=92.40 E-value=0.057 Score=51.62 Aligned_cols=22 Identities=32% Similarity=0.606 Sum_probs=19.2
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+||+|+|.+++|||||++++.
T Consensus 2 ~~kv~ivG~~gvGKStLl~~l~ 23 (184)
T 2zej_A 2 RMKLMIVGNTGSGKTTLLQQLM 23 (184)
T ss_dssp -CEEEEESCTTSSHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHh
Confidence 4799999999999999999753
No 226
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=92.34 E-value=0.066 Score=50.31 Aligned_cols=23 Identities=30% Similarity=0.460 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+++|..++|||||+.++
T Consensus 2 ~~~~ki~v~G~~~~GKSsli~~l 24 (189)
T 4dsu_A 2 STEYKLVVVGADGVGKSALTIQL 24 (189)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHH
T ss_pred CcEEEEEEECCCCCCHHHHHHHH
Confidence 35789999999999999999886
No 227
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=92.31 E-value=0.042 Score=63.36 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=43.8
Q ss_pred eEEEEEeCCCCCC-----------CcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHc
Q 042025 647 KYQLIRVNAKGMN-----------EGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIR 715 (844)
Q Consensus 647 ~~~liDVGGQ~rs-----------eR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n 715 (844)
.+.+||+.|. .. .+..|..++.++|+||||+|.++++- . .+...+++.+..
T Consensus 155 ~l~lIDTPG~-~~~~~~~~~~~~~f~~~~~~~l~~aD~il~VvDa~~~~~--------------~---~~~~~~l~~l~~ 216 (550)
T 2qpt_A 155 SISIIDTPGI-LSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHKLEI--------------S---DEFSEAIGALRG 216 (550)
T ss_dssp HCEEEECCCB-CC-------CCSCHHHHHHHHHHHCSEEEEEEETTSCCC--------------C---HHHHHHHHHTTT
T ss_pred CEEEEECcCC-CCcchhHHHHHhhHHHHHHHHHHhCCEEEEEEeCCcCCC--------------C---HHHHHHHHHHHh
Confidence 5789999998 32 11334556788999999999875211 1 122233333322
Q ss_pred CCCCCCCcEEEEecccchhh
Q 042025 716 HPCFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 716 ~p~f~~tpiILfLNK~DLfe 735 (844)
.+.|++|++||+|+..
T Consensus 217 ----~~~pvilVlNK~Dl~~ 232 (550)
T 2qpt_A 217 ----HEDKIRVVLNKADMVE 232 (550)
T ss_dssp ----CGGGEEEEEECGGGSC
T ss_pred ----cCCCEEEEEECCCccC
Confidence 2578999999999973
No 228
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=92.31 E-value=0.075 Score=49.41 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=20.2
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+++|..++|||||++++
T Consensus 7 ~~~~~i~v~G~~~~GKssli~~l 29 (181)
T 2fn4_A 7 SETHKLVVVGGGGVGKSALTIQF 29 (181)
T ss_dssp SCEEEEEEEECTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 35689999999999999998775
No 229
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=92.28 E-value=0.061 Score=50.49 Aligned_cols=23 Identities=43% Similarity=0.756 Sum_probs=20.9
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+++|..++||||+++++
T Consensus 16 ~~~~~i~v~G~~~~GKssli~~l 38 (183)
T 1moz_A 16 NKELRILILGLDGAGKTTILYRL 38 (183)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHT
T ss_pred CCccEEEEECCCCCCHHHHHHHH
Confidence 57899999999999999999765
No 230
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=92.27 E-value=0.055 Score=52.14 Aligned_cols=18 Identities=39% Similarity=0.658 Sum_probs=16.5
Q ss_pred eEEEeeccCCChhhHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQ 447 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQ 447 (844)
-++|+|.+||||||++|.
T Consensus 11 i~~l~G~nGsGKSTl~~~ 28 (171)
T 4gp7_A 11 LVVLIGSSGSGKSTFAKK 28 (171)
T ss_dssp EEEEECCTTSCHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478999999999999995
No 231
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=92.26 E-value=0.081 Score=51.12 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=22.7
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+-.++.+||+++|..++|||||++++
T Consensus 24 ~~~~~~~ki~v~G~~~vGKSsLi~~l 49 (192)
T 2b6h_A 24 IFGKKQMRILMVGLDAAGKTTILYKL 49 (192)
T ss_dssp TTTTSCEEEEEEESTTSSHHHHHHHH
T ss_pred hccCCccEEEEECCCCCCHHHHHHHH
Confidence 33467899999999999999999976
No 232
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=92.22 E-value=0.067 Score=51.15 Aligned_cols=26 Identities=31% Similarity=0.374 Sum_probs=21.9
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.-.++.+||+|+|..++|||||++++
T Consensus 17 ~~~~~~~ki~v~G~~~~GKSsli~~l 42 (188)
T 1zd9_A 17 RGSKEEMELTLVGLQYSGKTTFVNVI 42 (188)
T ss_dssp --CCEEEEEEEECSTTSSHHHHHHHH
T ss_pred cCCCCccEEEEECCCCCCHHHHHHHH
Confidence 34467899999999999999999986
No 233
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=92.18 E-value=0.074 Score=49.87 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=20.0
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..|++|+|.+++|||||++++-
T Consensus 3 ~~~v~lvG~~gvGKStL~~~l~ 24 (165)
T 2wji_A 3 SYEIALIGNPNVGKSTIFNALT 24 (165)
T ss_dssp EEEEEEECSTTSSHHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHh
Confidence 5799999999999999999873
No 234
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=92.17 E-value=0.071 Score=51.23 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=20.7
Q ss_pred hcceeeEEEeeccCCChhhHHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
....+||+|+|..++|||||++++.
T Consensus 25 ~~~~~ki~v~G~~~vGKSsli~~l~ 49 (196)
T 2atv_A 25 KSAEVKLAIFGRAGVGKSALVVRFL 49 (196)
T ss_dssp --CCEEEEEECCTTSSHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCHHHHHHHHH
Confidence 3567999999999999999997653
No 235
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=92.16 E-value=0.07 Score=49.60 Aligned_cols=23 Identities=30% Similarity=0.564 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+++|..++|||||++.+
T Consensus 7 ~~~~~i~v~G~~~~GKssl~~~l 29 (181)
T 3tw8_B 7 DHLFKLLIIGDSGVGKSSLLLRF 29 (181)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHH
T ss_pred CcceEEEEECCCCCCHHHHHHHH
Confidence 46789999999999999999875
No 236
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=92.12 E-value=0.072 Score=50.03 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=20.3
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||+.++
T Consensus 9 ~~~~ki~v~G~~~~GKSsli~~l 31 (195)
T 3bc1_A 9 DYLIKFLALGDSGVGKTSVLYQY 31 (195)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHH
T ss_pred ceeEEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999764
No 237
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=92.06 E-value=0.072 Score=50.57 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=20.2
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+.+||+++|.+++|||||+.++
T Consensus 20 ~~~ki~vvG~~~~GKSsli~~l 41 (190)
T 3con_A 20 TEYKLVVVGAGGVGKSALTIQL 41 (190)
T ss_dssp EEEEEEEECSTTSSHHHHHHHH
T ss_pred ceeEEEEECcCCCCHHHHHHHH
Confidence 4689999999999999999887
No 238
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=91.99 E-value=0.079 Score=50.94 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|.+++|||||++++
T Consensus 18 ~~~~ki~ivG~~~vGKSsL~~~~ 40 (184)
T 3ihw_A 18 GPELKVGIVGNLSSGKSALVHRY 40 (184)
T ss_dssp CCEEEEEEECCTTSCHHHHHHHH
T ss_pred CCeeEEEEECCCCCCHHHHHHHH
Confidence 46789999999999999999875
No 239
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=91.97 E-value=0.091 Score=49.96 Aligned_cols=26 Identities=31% Similarity=0.514 Sum_probs=22.7
Q ss_pred hhcceeeEEEeeccCCChhhHHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
-.++.+||+++|..++||||+++++.
T Consensus 12 ~~~~~~~i~v~G~~~~GKssl~~~l~ 37 (187)
T 1zj6_A 12 FNHQEHKVIIVGLDNAGKTTILYQFS 37 (187)
T ss_dssp HTTSCEEEEEEESTTSSHHHHHHHHH
T ss_pred cCCCccEEEEECCCCCCHHHHHHHHh
Confidence 34678999999999999999998764
No 240
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=91.95 E-value=0.081 Score=50.82 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||++++
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l 28 (207)
T 1vg8_A 6 KVLLKVIILGDSGVGKTSLMNQY 28 (207)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 56789999999999999999876
No 241
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=91.94 E-value=0.071 Score=49.95 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|.+++|||||++++
T Consensus 5 ~~~~ki~~vG~~~vGKTsli~~l 27 (178)
T 2iwr_A 5 IPELRLGVLGDARSGKSSLIHRF 27 (178)
T ss_dssp CCEEEEEEECCGGGCHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 35689999999999999999876
No 242
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=91.92 E-value=0.074 Score=49.58 Aligned_cols=23 Identities=13% Similarity=0.346 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++..||+|+|..++||||+++++
T Consensus 6 ~~~~~i~v~G~~~~GKssl~~~l 28 (178)
T 2lkc_A 6 ERPPVVTIMGHVDHGKTTLLDAI 28 (178)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHH
Confidence 46789999999999999999876
No 243
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=91.91 E-value=0.081 Score=49.76 Aligned_cols=24 Identities=29% Similarity=0.301 Sum_probs=21.1
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
...+||+|+|..++|||||++++.
T Consensus 16 ~~~~ki~v~G~~~~GKSsl~~~l~ 39 (183)
T 3kkq_A 16 LPTYKLVVVGDGGVGKSALTIQFF 39 (183)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHHH
Confidence 467999999999999999988753
No 244
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=91.90 E-value=0.083 Score=49.02 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=19.9
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+.+||+++|..++|||||++++
T Consensus 13 ~~~~i~v~G~~~~GKssli~~l 34 (179)
T 2y8e_A 13 RKFKLVFLGEQSVGKTSLITRF 34 (179)
T ss_dssp EEEEEEEEESTTSSHHHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHH
Confidence 4589999999999999999865
No 245
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=91.88 E-value=0.08 Score=49.42 Aligned_cols=23 Identities=22% Similarity=0.427 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||++++
T Consensus 8 ~~~~~i~v~G~~~~GKssli~~l 30 (180)
T 2g6b_A 8 DVAFKVMLVGDSGVGKTCLLVRF 30 (180)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999875
No 246
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=91.88 E-value=0.084 Score=50.31 Aligned_cols=23 Identities=13% Similarity=0.369 Sum_probs=20.3
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++|||||++++
T Consensus 18 ~~~~ki~v~G~~~~GKSsli~~l 40 (189)
T 1z06_A 18 SRIFKIIVIGDSNVGKTCLTYRF 40 (189)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHH
Confidence 56799999999999999999875
No 247
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=91.86 E-value=0.087 Score=50.27 Aligned_cols=23 Identities=43% Similarity=0.733 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|.+++||||+++++
T Consensus 14 ~~~~ki~ivG~~~vGKSsL~~~l 36 (181)
T 1fzq_A 14 DQEVRILLLGLDNAGKTTLLKQL 36 (181)
T ss_dssp SSCEEEEEEESTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999886
No 248
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=91.79 E-value=0.074 Score=52.19 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=18.9
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
++.|+|++||||||++|-+-=+
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~ 23 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVER 23 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 6899999999999999876533
No 249
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=91.72 E-value=0.61 Score=53.71 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=47.5
Q ss_pred ceEEEEEeCCCCCCCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEE
Q 042025 646 TKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFV 725 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiI 725 (844)
.++.|+|.-|+ -..---=.....-+|+.|.|||..+ | -+..+..+|+..... +.|.|
T Consensus 100 ~~iNlIDTPGH-vDF~~Ev~raL~~~DgAvlVvda~~-----------G-------V~~qT~~v~~~a~~~----~lp~i 156 (548)
T 3vqt_A 100 RVVNLLDTPGH-QDFSEDTYRVLTAVDSALVVIDAAK-----------G-------VEAQTRKLMDVCRMR----ATPVM 156 (548)
T ss_dssp EEEEEECCCCG-GGCSHHHHHHHHSCSEEEEEEETTT-----------B-------SCHHHHHHHHHHHHT----TCCEE
T ss_pred EEEEEEeCCCc-HHHHHHHHHHHHhcCceEEEeecCC-----------C-------cccccHHHHHHHHHh----CCceE
Confidence 57999999999 3322222223345899999999874 1 234677788777663 68999
Q ss_pred EEecccchhh
Q 042025 726 LILNKYDLFE 735 (844)
Q Consensus 726 LfLNK~DLfe 735 (844)
+|+||+|...
T Consensus 157 ~fINK~Dr~~ 166 (548)
T 3vqt_A 157 TFVNKMDREA 166 (548)
T ss_dssp EEEECTTSCC
T ss_pred EEEecccchh
Confidence 9999999743
No 250
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=91.71 E-value=0.072 Score=52.89 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=23.2
Q ss_pred Cchhhhhh--cceeeEEEeeccCCChhhHHHHHH
Q 042025 418 TVPNYLEQ--KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 418 ~Id~~Le~--k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+|+.|.- .+---++|+|++||||||++|++=
T Consensus 18 ~lD~~l~Ggi~~G~~~~l~GpnGsGKSTLl~~i~ 51 (251)
T 2ehv_A 18 GFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFI 51 (251)
T ss_dssp TTGGGTTTSEETTCEEEEECCTTSSHHHHHHHHH
T ss_pred hHHHHhcCCCCCCcEEEEEeCCCCCHHHHHHHHH
Confidence 45555531 223357889999999999999886
No 251
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=91.70 E-value=0.086 Score=48.15 Aligned_cols=21 Identities=24% Similarity=0.580 Sum_probs=19.2
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
.||+++|..++||||+++++.
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~ 22 (161)
T 2dyk_A 2 HKVVIVGRPNVGKSSLFNRLL 22 (161)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 589999999999999999864
No 252
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=91.68 E-value=0.093 Score=49.52 Aligned_cols=23 Identities=22% Similarity=0.257 Sum_probs=20.0
Q ss_pred hhcceeeEEEeeccCCChhhHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFK 446 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~K 446 (844)
.....+||+|+|..++|||||++
T Consensus 10 ~~~~~~ki~vvG~~~~GKssL~~ 32 (198)
T 3t1o_A 10 NREINFKIVYYGPGLSGKTTNLK 32 (198)
T ss_dssp TTEEEEEEEEECSTTSSHHHHHH
T ss_pred ccccccEEEEECCCCCCHHHHHH
Confidence 34568999999999999999984
No 253
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=91.66 E-value=0.086 Score=50.42 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=21.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
...+||+|+|..++|||||++++.
T Consensus 21 ~~~~ki~v~G~~~~GKSsli~~l~ 44 (191)
T 3dz8_A 21 DYMFKLLIIGNSSVGKTSFLFRYA 44 (191)
T ss_dssp EECEEEEEEESTTSSHHHHHHHHH
T ss_pred CeeeEEEEECCCCcCHHHHHHHHh
Confidence 467899999999999999998763
No 254
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=91.65 E-value=0.078 Score=51.55 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=19.3
Q ss_pred hcceeeEEEeeccCCChhhHHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+++.+||+|+|..++|||||+.++.
T Consensus 4 ~~~~~ki~vvG~~~~GKTsli~~l~ 28 (214)
T 2fh5_B 4 KSSQRAVLFVGLCDSGKTLLFVRLL 28 (214)
T ss_dssp ----CEEEEECSTTSSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHh
Confidence 3567899999999999999998753
No 255
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=91.62 E-value=0.084 Score=50.94 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=20.0
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..++.+||+|+|..++|||||++++
T Consensus 24 ~~~~~~ki~v~G~~~~GKSsli~~l 48 (199)
T 2p5s_A 24 SSQKAYKIVLAGDAAVGKSSFLMRL 48 (199)
T ss_dssp ----CEEEEEESSTTSSHHHHHHHH
T ss_pred CcCCCeEEEEECcCCCCHHHHHHHH
Confidence 4466899999999999999999976
No 256
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=91.58 E-value=0.089 Score=50.34 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=21.1
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.++.+||+|+|..++|||||++++
T Consensus 20 ~~~~~ki~~vG~~~~GKSsl~~~l 43 (194)
T 3reg_A 20 GKKALKIVVVGDGAVGKTCLLLAF 43 (194)
T ss_dssp -CEEEEEEEECSTTSSHHHHHHHH
T ss_pred cceeeEEEEECcCCCCHHHHHHHH
Confidence 356899999999999999999875
No 257
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=91.53 E-value=0.093 Score=49.60 Aligned_cols=23 Identities=43% Similarity=0.743 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+++|..++||||+++++
T Consensus 16 ~~~~~i~v~G~~~~GKssl~~~l 38 (186)
T 1ksh_A 16 ERELRLLMLGLDNAGKTTILKKF 38 (186)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHH
T ss_pred CCeeEEEEECCCCCCHHHHHHHH
Confidence 67899999999999999999875
No 258
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=91.52 E-value=0.086 Score=50.29 Aligned_cols=23 Identities=26% Similarity=0.514 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++|||||++.+
T Consensus 23 ~~~~ki~v~G~~~~GKSsLi~~l 45 (193)
T 2oil_A 23 NFVFKVVLIGESGVGKTNLLSRF 45 (193)
T ss_dssp SEEEEEEEESSTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999875
No 259
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=91.50 E-value=0.096 Score=50.24 Aligned_cols=23 Identities=35% Similarity=0.418 Sum_probs=20.9
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+|+|..++|||||++.+
T Consensus 21 ~~~~ki~vvG~~~~GKSsli~~l 43 (192)
T 2fg5_A 21 IRELKVCLLGDTGVGKSSIVCRF 43 (192)
T ss_dssp CEEEEEEEEECTTSSHHHHHHHH
T ss_pred CCceEEEEECcCCCCHHHHHHHH
Confidence 56799999999999999999876
No 260
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=91.46 E-value=0.093 Score=49.12 Aligned_cols=22 Identities=14% Similarity=0.265 Sum_probs=19.8
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+.+||+++|..++|||||+.++
T Consensus 4 ~~~~i~~~G~~~~GKssl~~~l 25 (186)
T 1mh1_A 4 QAIKCVVVGDGAVGKTCLLISY 25 (186)
T ss_dssp EEEEEEEECSTTSSHHHHHHHH
T ss_pred cEEEEEEECCCCCCHHHHHHHH
Confidence 4689999999999999999765
No 261
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=91.44 E-value=0.091 Score=49.97 Aligned_cols=24 Identities=13% Similarity=0.335 Sum_probs=21.1
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+.+||+++|..++||||++.++.
T Consensus 46 ~~~~~i~vvG~~g~GKSsll~~l~ 69 (193)
T 2ged_A 46 SYQPSIIIAGPQNSGKTSLLTLLT 69 (193)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh
Confidence 456899999999999999999763
No 262
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=91.43 E-value=0.11 Score=50.95 Aligned_cols=26 Identities=15% Similarity=0.175 Sum_probs=22.8
Q ss_pred EEEEEEeecCCCCHHHHHHHHHHHHh
Q 042025 788 LFVWQARARDRVTVDEAFKYIREVLK 813 (844)
Q Consensus 788 lyvh~T~AtDte~I~evF~~V~e~Ik 813 (844)
+.++.+||.++.+|+++|+++.+.+.
T Consensus 198 ~~~~~~Sa~~g~gv~~l~~~l~~~~~ 223 (226)
T 2hf9_A 198 AEVVLLSLKTMEGFDKVLEFIEKSVK 223 (226)
T ss_dssp SEEEECCTTTCTTHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999988764
No 263
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=91.41 E-value=0.098 Score=49.58 Aligned_cols=25 Identities=32% Similarity=0.557 Sum_probs=20.3
Q ss_pred hcceeeEEEeeccCCChhhHHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..+.+||+++|..++|||||++++.
T Consensus 18 ~~~~~~i~v~G~~~~GKSsli~~l~ 42 (181)
T 2h17_A 18 GSQEHKVIIVGLDNAGKTTILYQFS 42 (181)
T ss_dssp ---CEEEEEEEETTSSHHHHHHHHH
T ss_pred CCceeEEEEECCCCCCHHHHHHHHh
Confidence 3557899999999999999999864
No 264
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=91.37 E-value=0.096 Score=49.69 Aligned_cols=23 Identities=35% Similarity=0.514 Sum_probs=21.0
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||++++
T Consensus 14 ~~~~ki~v~G~~~~GKSsli~~l 36 (196)
T 3tkl_A 14 DYLFKLLLIGDSGVGKSCLLLRF 36 (196)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHH
T ss_pred ccceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999886
No 265
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=91.36 E-value=0.093 Score=50.61 Aligned_cols=25 Identities=36% Similarity=0.506 Sum_probs=18.8
Q ss_pred hhhcceeeEEEeeccCCChhhHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQ 447 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQ 447 (844)
-..++.+||+|+|.+++|||||++.
T Consensus 15 ~~~~~~~ki~~vG~~~vGKTsLi~~ 39 (196)
T 3llu_A 15 YFQGSKPRILLMGLRRSGKSSIQKV 39 (196)
T ss_dssp -----CCEEEEEESTTSSHHHHHHH
T ss_pred cccCcceEEEEECCCCCCHHHHHHH
Confidence 3456789999999999999999873
No 266
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=91.32 E-value=0.098 Score=49.82 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||++++
T Consensus 20 ~~~~ki~vvG~~~~GKSsli~~l 42 (189)
T 2gf9_A 20 DYMFKLLLIGNSSVGKTSFLFRY 42 (189)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHH
T ss_pred CceeEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999874
No 267
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=91.32 E-value=0.098 Score=49.28 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=19.1
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
+||+++|..++|||||++++.
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~ 22 (190)
T 2cxx_A 2 ATIIFAGRSNVGKSTLIYRLT 22 (190)
T ss_dssp CEEEEEEBTTSSHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHh
Confidence 699999999999999999763
No 268
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=91.32 E-value=0.11 Score=51.19 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=20.4
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||++++
T Consensus 26 ~~~~ki~vvG~~~vGKSsLi~~l 48 (205)
T 1gwn_A 26 NVKCKIVVVGDSQCGKTALLHVF 48 (205)
T ss_dssp -CEEEEEEEESTTSSHHHHHHHH
T ss_pred ceeeEEEEECCCCCCHHHHHHHH
Confidence 56799999999999999999975
No 269
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=91.31 E-value=0.099 Score=50.51 Aligned_cols=23 Identities=35% Similarity=0.528 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||+.++
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l 28 (206)
T 2bcg_Y 6 DYLFKLLLIGNSGVGKSCLLLRF 28 (206)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHH
T ss_pred CcceEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999875
No 270
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=91.29 E-value=0.088 Score=50.21 Aligned_cols=24 Identities=33% Similarity=0.523 Sum_probs=19.7
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+.+||+|+|..++|||||++++
T Consensus 18 ~~~~~ki~v~G~~~~GKSsli~~l 41 (190)
T 2h57_A 18 GSKEVHVLCLGLDNSGKTTIINKL 41 (190)
T ss_dssp ---CEEEEEEECTTSSHHHHHHHT
T ss_pred CCCccEEEEECCCCCCHHHHHHHH
Confidence 356789999999999999999875
No 271
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=91.28 E-value=0.088 Score=51.19 Aligned_cols=23 Identities=30% Similarity=0.475 Sum_probs=20.4
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|.+++|||||++++
T Consensus 21 ~~~~ki~vvG~~~vGKSsLi~~l 43 (195)
T 3cbq_A 21 DGIFKVMLVGESGVGKSTLAGTF 43 (195)
T ss_dssp -CEEEEEEECSTTSSHHHHHHHT
T ss_pred CcEEEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999985
No 272
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=91.28 E-value=0.095 Score=50.51 Aligned_cols=24 Identities=46% Similarity=0.689 Sum_probs=19.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+..||+++|.+++||||+++++.
T Consensus 21 ~~~~ki~~vG~~~vGKSsli~~l~ 44 (190)
T 1m2o_B 21 NKHGKLLFLGLDNAGKTTLLHMLK 44 (190)
T ss_dssp ---CEEEEEESTTSSHHHHHHHHH
T ss_pred CCccEEEEECCCCCCHHHHHHHHh
Confidence 456799999999999999999763
No 273
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=91.26 E-value=0.085 Score=54.32 Aligned_cols=73 Identities=10% Similarity=0.011 Sum_probs=42.4
Q ss_pred ceEEEEEeCCCCCCCc---c----cceec--cCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcC
Q 042025 646 TKYQLIRVNAKGMNEG---C----KWVEM--FEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRH 716 (844)
Q Consensus 646 ~~~~liDVGGQ~rseR---~----KW~~~--FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~ 716 (844)
.++.+||+.|+. ..+ . .+..| ...++++|||+|+.... . .+--.+.+..+...+..
T Consensus 87 ~~l~iiDTpG~~-~~~~~~~~~~~~i~~~~~~~~~d~il~v~~~d~~~--~------------~~~~~~~~~~l~~~~~~ 151 (270)
T 1h65_A 87 FTLNIIDTPGLI-EGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYR--V------------DNLDKLVAKAITDSFGK 151 (270)
T ss_dssp EEEEEEECCCSE-ETTEECHHHHHHHHHHTTTCEECEEEEEEESSCCC--C------------CHHHHHHHHHHHHHHCG
T ss_pred eEEEEEECCCCC-CCccchHHHHHHHHHHhhcCCCCEEEEEEeCCCCc--C------------CHHHHHHHHHHHHHhCc
Confidence 579999999983 222 1 11122 34799999999886421 1 11112333444443331
Q ss_pred CCCCCCcEEEEecccchhh
Q 042025 717 PCFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 717 p~f~~tpiILfLNK~DLfe 735 (844)
. ...|+||++||.|+..
T Consensus 152 ~--~~~~iivV~nK~Dl~~ 168 (270)
T 1h65_A 152 G--IWNKAIVALTHAQFSP 168 (270)
T ss_dssp G--GGGGEEEEEECCSCCC
T ss_pred c--cccCEEEEEECcccCC
Confidence 1 1268999999999853
No 274
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=91.25 E-value=0.086 Score=51.00 Aligned_cols=22 Identities=14% Similarity=0.282 Sum_probs=18.4
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
-+.|+|++||||||++|.+.=+
T Consensus 9 ii~l~Gp~GsGKSTl~~~L~~~ 30 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLVRALVKA 30 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHhh
Confidence 4789999999999999977433
No 275
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=91.23 E-value=0.082 Score=49.88 Aligned_cols=23 Identities=13% Similarity=0.290 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
....||+|+|..++||||++.++
T Consensus 21 ~~~~~i~v~G~~~~GKSsli~~l 43 (195)
T 3pqc_A 21 PLKGEVAFVGRSNVGKSSLLNAL 43 (195)
T ss_dssp CTTCEEEEEEBTTSSHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHH
Confidence 45679999999999999999876
No 276
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=91.14 E-value=0.099 Score=48.02 Aligned_cols=20 Identities=35% Similarity=0.707 Sum_probs=18.7
Q ss_pred eeEEEeeccCCChhhHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQm 448 (844)
+||+++|..++||||+++++
T Consensus 1 ~ki~~~G~~~~GKssl~~~l 20 (164)
T 1r8s_A 1 MRILMVGLDAAGKTTILYKL 20 (164)
T ss_dssp CEEEEECSTTSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999887
No 277
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=91.10 E-value=0.11 Score=49.73 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 19 ~~~~ki~v~G~~~~GKSsli~~l 41 (191)
T 2a5j_A 19 SYLFKYIIIGDTGVGKSCLLLQF 41 (191)
T ss_dssp CEEEEEEEESSTTSSHHHHHHHH
T ss_pred CcceEEEEECcCCCCHHHHHHHH
Confidence 34689999999999999999876
No 278
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=91.04 E-value=0.11 Score=49.25 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=19.5
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...||+|+|.+++|||||++++
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l 24 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNAL 24 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHH
Confidence 4579999999999999999876
No 279
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=90.96 E-value=0.12 Score=50.28 Aligned_cols=23 Identities=43% Similarity=0.704 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+..||+|+|.+++||||+++++
T Consensus 23 ~~~~ki~lvG~~~vGKSsLi~~l 45 (198)
T 1f6b_A 23 KKTGKLVFLGLDNAGKTTLLHML 45 (198)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHH
Confidence 45689999999999999999976
No 280
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=90.93 E-value=0.11 Score=49.09 Aligned_cols=23 Identities=26% Similarity=0.508 Sum_probs=20.9
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++|||||++++
T Consensus 13 ~~~~~i~v~G~~~~GKssli~~l 35 (195)
T 1x3s_A 13 LTTLKILIIGESGVGKSSLLLRF 35 (195)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45689999999999999999987
No 281
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=90.83 E-value=0.12 Score=49.78 Aligned_cols=23 Identities=13% Similarity=0.476 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 24 ~~~~ki~vvG~~~~GKSsLi~~l 46 (192)
T 2il1_A 24 DFKLQVIIIGSRGVGKTSLMERF 46 (192)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45689999999999999999986
No 282
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=90.81 E-value=0.11 Score=50.57 Aligned_cols=24 Identities=13% Similarity=0.354 Sum_probs=20.6
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.++..||+|+|..++||||++.++
T Consensus 9 ~~~~~~i~~~G~~g~GKTsl~~~l 32 (218)
T 1nrj_B 9 KSYQPSIIIAGPQNSGKTSLLTLL 32 (218)
T ss_dssp -CCCCEEEEECSTTSSHHHHHHHH
T ss_pred cCCCCEEEEECCCCCCHHHHHHHH
Confidence 356789999999999999999864
No 283
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=90.81 E-value=0.13 Score=50.51 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=21.1
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+.+||+++|..++|||||++++.
T Consensus 32 ~~~~ki~vvG~~~vGKSsli~~l~ 55 (214)
T 2j1l_A 32 VRSVKVVLVGDGGCGKTSLLMVFA 55 (214)
T ss_dssp CCEEEEEEEECTTSSHHHHHHHHH
T ss_pred cceEEEEEECcCCCCHHHHHHHHH
Confidence 467999999999999999997753
No 284
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=90.80 E-value=0.11 Score=50.50 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++|||||++++
T Consensus 23 ~~~~ki~vvG~~~~GKSsLi~~l 45 (217)
T 2f7s_A 23 DYLIKLLALGDSGVGKTTFLYRY 45 (217)
T ss_dssp SEEEEEEEESCTTSSHHHHHHHH
T ss_pred ceeEEEEEECcCCCCHHHHHHHH
Confidence 55799999999999999999765
No 285
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=90.80 E-value=0.12 Score=49.69 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=19.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 18 ~~~~ki~~~G~~~~GKssl~~~l 40 (201)
T 2q3h_A 18 GRGVKCVLVGDGAVGKTSLVVSY 40 (201)
T ss_dssp --CEEEEEECSTTSSHHHHHHHH
T ss_pred CcceEEEEECCCCCCHHHHHHHH
Confidence 56789999999999999999875
No 286
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=90.76 E-value=0.1 Score=50.21 Aligned_cols=20 Identities=30% Similarity=0.436 Sum_probs=17.8
Q ss_pred eEEEeeccCCChhhHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmK 449 (844)
-++|+|.+||||||++|.+-
T Consensus 4 ii~l~G~~GaGKSTl~~~L~ 23 (189)
T 2bdt_A 4 LYIITGPAGVGKSTTCKRLA 23 (189)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHh
Confidence 36899999999999999884
No 287
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=90.76 E-value=0.1 Score=50.41 Aligned_cols=23 Identities=30% Similarity=0.361 Sum_probs=19.3
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.+.|+|++||||||++|.+.-.+
T Consensus 7 ~i~i~GpsGsGKSTL~~~L~~~~ 29 (180)
T 1kgd_A 7 TLVLLGAHGVGRRHIKNTLITKH 29 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhhC
Confidence 57899999999999999875444
No 288
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=90.75 E-value=0.11 Score=50.93 Aligned_cols=33 Identities=12% Similarity=0.199 Sum_probs=24.0
Q ss_pred Cchhhhhh--cceeeEEEeeccCCChhhHHHHHHH
Q 042025 418 TVPNYLEQ--KKVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 418 ~Id~~Le~--k~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.+|+.|.- ..---+.|+|++||||||++|++=-
T Consensus 13 ~LD~~l~ggi~~G~~~~l~G~nGsGKSTll~~l~g 47 (231)
T 4a74_A 13 SLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 47 (231)
T ss_dssp HHHHHTTSSEESSEEEEEEESTTSSHHHHHHHHHH
T ss_pred hHHhHhcCCCCCCcEEEEECCCCCCHHHHHHHHHH
Confidence 45555532 2334688999999999999999843
No 289
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=90.73 E-value=0.11 Score=49.34 Aligned_cols=23 Identities=30% Similarity=0.625 Sum_probs=21.3
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+++|..++||||++.++
T Consensus 20 ~~~~~i~v~G~~~~GKssli~~l 42 (189)
T 2x77_A 20 DRKIRVLMLGLDNAGKTSILYRL 42 (189)
T ss_dssp TSCEEEEEEEETTSSHHHHHHHT
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 56899999999999999999986
No 290
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=90.57 E-value=0.13 Score=48.58 Aligned_cols=26 Identities=35% Similarity=0.423 Sum_probs=21.8
Q ss_pred eEEEeeccCCChhhHHHHHHHHhcCC
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYGNK 455 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~~g 455 (844)
.|+|+|..||||||+.|.+--.++..
T Consensus 6 ~i~l~G~~GsGKSTl~~~La~~l~~~ 31 (173)
T 1kag_A 6 NIFLVGPMGAGKSTIGRQLAQQLNME 31 (173)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTTCE
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 58999999999999999887665543
No 291
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=90.44 E-value=0.13 Score=50.64 Aligned_cols=24 Identities=33% Similarity=0.400 Sum_probs=20.2
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-.+.|+|++||||||++|.+-=+|
T Consensus 5 ~~i~lvGpsGaGKSTLl~~L~~~~ 28 (198)
T 1lvg_A 5 RPVVLSGPSGAGKSTLLKKLFQEH 28 (198)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHhhC
Confidence 368899999999999999875444
No 292
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=90.43 E-value=0.11 Score=50.28 Aligned_cols=22 Identities=32% Similarity=0.548 Sum_probs=18.8
Q ss_pred EEEeeccCCChhhHHHHHHHHh
Q 042025 431 LLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmKiLy 452 (844)
+.|+|++||||||++|.+-=++
T Consensus 4 i~l~GpsGaGKsTl~~~L~~~~ 25 (186)
T 3a00_A 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEESSSSSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhhC
Confidence 6799999999999999876544
No 293
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=90.43 E-value=0.14 Score=50.35 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++|||||++++
T Consensus 24 ~~~~ki~lvG~~~vGKSsLi~~l 46 (201)
T 2ew1_A 24 DFLFKIVLIGNAGVGKTCLVRRF 46 (201)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHH
T ss_pred ccceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999875
No 294
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=90.41 E-value=0.14 Score=49.75 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=20.3
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||+.++
T Consensus 7 ~~~~ki~i~G~~~~GKTsli~~l 29 (212)
T 2j0v_A 7 SKFIKCVTVGDGAVGKTCMLICY 29 (212)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHH
Confidence 46789999999999999999654
No 295
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=90.39 E-value=0.094 Score=50.69 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=22.3
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
|.-....+++|+|.+++||||+++.+
T Consensus 21 ~~~~~~~~v~lvG~~g~GKSTLl~~l 46 (210)
T 1pui_A 21 LPSDTGIEVAFAGRSNAGKSSALNTL 46 (210)
T ss_dssp SSCSCSEEEEEEECTTSSHHHHHTTT
T ss_pred CCCCCCcEEEEECCCCCCHHHHHHHH
Confidence 55566789999999999999999864
No 296
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=90.36 E-value=0.17 Score=50.02 Aligned_cols=28 Identities=25% Similarity=0.235 Sum_probs=22.9
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+....+.|+|++||||||++|.+--++.
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~~l~~~~~ 47 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSNPLAAALS 47 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 3456889999999999999998865553
No 297
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=90.33 E-value=0.088 Score=49.53 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=12.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+|+|..++|||||+.++
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~l 28 (183)
T 2fu5_C 6 DYLFKLLLIGDSGVGKTCVLFRF 28 (183)
T ss_dssp SEEEEEEEECCCCC---------
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999875
No 298
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=90.26 E-value=0.14 Score=49.22 Aligned_cols=22 Identities=18% Similarity=0.388 Sum_probs=20.0
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+||+|+|..++|||||++++
T Consensus 7 ~~~ki~v~G~~~~GKSsli~~l 28 (203)
T 1zbd_A 7 YMFKILIIGNSSVGKTSFLFRY 28 (203)
T ss_dssp EEEEEEEECSTTSSHHHHHHHH
T ss_pred eeeEEEEECCCCCCHHHHHHHH
Confidence 4689999999999999999876
No 299
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=89.73 E-value=0.053 Score=52.45 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=25.0
Q ss_pred chhhhhhcceeeEEEeeccCCChhhHHHHH
Q 042025 419 VPNYLEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 419 Id~~Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+.+..++.+||+++|..++|||||+.++
T Consensus 21 m~~~~~~~~~~ki~v~G~~~~GKSsli~~l 50 (204)
T 3th5_A 21 MENLYFQGQAIKCVVVGDGAVGKTCLLISY 50 (204)
Confidence 344455678999999999999999999775
No 300
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=90.18 E-value=0.15 Score=48.44 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=20.3
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.....||+|+|..++|||||+.++
T Consensus 14 ~~~~~ki~v~G~~~~GKSsl~~~l 37 (199)
T 4bas_A 14 SKTKLQVVMCGLDNSGKTTIINQV 37 (199)
T ss_dssp --CEEEEEEECCTTSCHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHH
Confidence 356789999999999999999875
No 301
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=90.12 E-value=0.15 Score=48.58 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=21.2
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+..+||+++|..++|||||++++.
T Consensus 16 ~~~~ki~v~G~~~~GKssli~~l~ 39 (194)
T 2atx_A 16 ALMLKCVVVGDGAVGKTCLLMSYA 39 (194)
T ss_dssp EEEEEEEEEECTTSSHHHHHHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHHh
Confidence 467899999999999999998753
No 302
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=90.11 E-value=0.16 Score=49.28 Aligned_cols=22 Identities=32% Similarity=0.487 Sum_probs=19.9
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+||+|||.+++|||||+.++
T Consensus 5 ~~~kv~lvG~~~vGKSsL~~~~ 26 (192)
T 2cjw_A 5 TYYRVVLIGEQGVGKSTLANIF 26 (192)
T ss_dssp CEEEEEEECSTTSSHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHH
Confidence 4689999999999999999875
No 303
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=90.10 E-value=0.19 Score=49.16 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=22.1
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
...+.|+|..||||||++|.+.=+++
T Consensus 6 ~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 6 PFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred cEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34688999999999999999876664
No 304
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=90.07 E-value=0.13 Score=47.50 Aligned_cols=19 Identities=32% Similarity=0.552 Sum_probs=17.6
Q ss_pred eEEEeeccCCChhhHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQm 448 (844)
-|+|.|..||||||+.+.+
T Consensus 3 ~I~l~G~~GsGKsT~a~~L 21 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL 21 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4789999999999999988
No 305
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=90.01 E-value=0.16 Score=49.42 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 27 ~~~~ki~vvG~~~vGKSsli~~l 49 (201)
T 2hup_A 27 DFLFKLVLVGDASVGKTCVVQRF 49 (201)
T ss_dssp CEEEEEEEEECTTSSHHHHHHHH
T ss_pred ccceEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999876
No 306
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=90.00 E-value=0.14 Score=48.11 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=18.5
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
-|+|.|.+||||||+.|++.-
T Consensus 4 ~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 4 IILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEecCCCCCHHHHHHHHHh
Confidence 478999999999999998764
No 307
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=89.99 E-value=0.16 Score=49.76 Aligned_cols=31 Identities=29% Similarity=0.471 Sum_probs=23.1
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc-CCCCHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG-NKFTAEE 460 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~-~gFS~eE 460 (844)
+|+|.|..||||||+.+.+.--++ ..++.++
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~ 33 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAEQIIEKYEIPHISTGD 33 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEeeHHH
Confidence 789999999999999998843333 3355443
No 308
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=89.89 E-value=0.13 Score=49.59 Aligned_cols=24 Identities=25% Similarity=0.184 Sum_probs=20.0
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..+.|+|++||||||++|.+.-++
T Consensus 7 ~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 7 LLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp CEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CEEEEECCCCCCHHHHHHHHHHhh
Confidence 358899999999999999876444
No 309
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=89.82 E-value=0.17 Score=49.12 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=20.4
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+++|..++|||||+.++
T Consensus 23 ~~~~ki~vvG~~~~GKSsli~~l 45 (207)
T 2fv8_A 23 MIRKKLVVVGDGACGKTCLLIVF 45 (207)
T ss_dssp SEEEEEEEEECTTSSHHHHHHHH
T ss_pred ccCcEEEEECcCCCCHHHHHHHH
Confidence 45689999999999999999765
No 310
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=89.79 E-value=0.14 Score=50.56 Aligned_cols=22 Identities=23% Similarity=0.292 Sum_probs=18.4
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
-+.|+|++||||||++|-+-=+
T Consensus 22 i~~l~GpnGsGKSTLl~~l~gl 43 (207)
T 1znw_A 22 VVVLSGPSAVGKSTVVRCLRER 43 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHhh
Confidence 4789999999999999977433
No 311
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=89.65 E-value=0.17 Score=48.87 Aligned_cols=22 Identities=18% Similarity=0.307 Sum_probs=19.4
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+||+++|..++|||||++++
T Consensus 24 ~~~ki~vvG~~~~GKSsli~~l 45 (201)
T 2gco_A 24 IRKKLVIVGDGACGKTCLLIVF 45 (201)
T ss_dssp EEEEEEEEESTTSSHHHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHH
Confidence 4689999999999999999654
No 312
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=89.58 E-value=0.16 Score=49.72 Aligned_cols=27 Identities=19% Similarity=0.368 Sum_probs=20.9
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHh
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
+...-+.|+|..||||||++|.+--.+
T Consensus 27 ~~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 27 EPTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 334568899999999999999885333
No 313
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=89.51 E-value=0.18 Score=50.61 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=20.5
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.....+||+|+|..++||||+++.+
T Consensus 25 ~~~~~~~i~lvG~~g~GKStlin~l 49 (239)
T 3lxx_A 25 PRNSQLRIVLVGKTGAGKSATGNSI 49 (239)
T ss_dssp ---CEEEEEEECCTTSSHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCHHHHHHHH
Confidence 3456899999999999999999875
No 314
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=89.40 E-value=0.17 Score=51.03 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=19.6
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+.+||+|||.+++|||+|+.++
T Consensus 12 k~~KivlvGd~~VGKTsLi~r~ 33 (216)
T 4dkx_A 12 RKFKLVFLGEQSVGKTSLITRF 33 (216)
T ss_dssp -CEEEEEECSTTSSHHHHHHHH
T ss_pred CcEEEEEECcCCcCHHHHHHHH
Confidence 4689999999999999999975
No 315
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=89.34 E-value=0.16 Score=51.31 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=21.0
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
...++|+|.+||||||++|.+---++
T Consensus 27 ~~~i~l~G~~GsGKSTl~k~La~~lg 52 (246)
T 2bbw_A 27 LLRAVILGPPGSGKGTVCQRIAQNFG 52 (246)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34699999999999999998753333
No 316
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=89.29 E-value=0.18 Score=49.60 Aligned_cols=31 Identities=32% Similarity=0.523 Sum_probs=23.1
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc-CCCCHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG-NKFTAEE 460 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~-~gFS~eE 460 (844)
+|+|.|..||||||+.+.+.--++ ..++.++
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~ 33 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKYGIPHISTGD 33 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCCEEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEeHHH
Confidence 689999999999999998843343 3355443
No 317
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=89.28 E-value=0.19 Score=51.85 Aligned_cols=112 Identities=13% Similarity=0.225 Sum_probs=54.6
Q ss_pred ceEEEEEeCCCCC--CCcccceec-----------cC-------------CccEEEEEeecccccccccCCCCCCCcccc
Q 042025 646 TKYQLIRVNAKGM--NEGCKWVEM-----------FE-------------DVRVVVFCVALSDYDQMWICPESSGSGTLL 699 (844)
Q Consensus 646 ~~~~liDVGGQ~r--seR~KW~~~-----------Fe-------------dV~aIIFVVdLSDYDq~l~~~ED~g~~~~~ 699 (844)
.++.+||+.|++. .....|... +. .++++||+|+-+.- .
T Consensus 65 ~~l~liDTpG~~d~~~~~~~~~~i~~~i~~~~~~~l~~~~~~~r~~~~d~r~~~~l~~i~~~~~--------~------- 129 (274)
T 3t5d_A 65 LLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGH--------G------- 129 (274)
T ss_dssp EEEEEEECCCCSCCSCCTTTTHHHHHHHHHHHHHHHHHHHSSCCCSCCCCCCCEEEEEECSCCS--------S-------
T ss_pred EEEEEEECCCccccccchhhHHHHHHHHHHHHHHHHHhhcccccccccCCceeEEEEEecCCCC--------C-------
Confidence 5899999999841 112334322 22 27799999876530 0
Q ss_pred cchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhh
Q 042025 700 QNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDL 779 (844)
Q Consensus 700 ~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L 779 (844)
.. ...+.+++.+.. +.|+|+++||.|++... . .+...+-|...+..
T Consensus 130 ~~--~~d~~~l~~l~~-----~~pvi~V~nK~D~~~~~----e----------------------~~~~~~~i~~~l~~- 175 (274)
T 3t5d_A 130 LK--PLDIEFMKRLHE-----KVNIIPLIAKADTLTPE----E----------------------CQQFKKQIMKEIQE- 175 (274)
T ss_dssp CC--HHHHHHHHHHTT-----TSCEEEEESSGGGSCHH----H----------------------HHHHHHHHHHHHHH-
T ss_pred CC--HHHHHHHHHHhc-----cCCEEEEEeccCCCCHH----H----------------------HHHHHHHHHHHHHH-
Confidence 11 122445555544 68999999999986421 0 11111222222211
Q ss_pred hccCCCCcEEEEEEeecCCCCHHHHHHHHHHHH
Q 042025 780 YASLTGRKLFVWQARARDRVTVDEAFKYIREVL 812 (844)
Q Consensus 780 ~~s~~~Rklyvh~T~AtDte~I~evF~~V~e~I 812 (844)
..+-++.++|.+++++.+.++++.+.+
T Consensus 176 ------~~i~v~~~sa~~~~~~~~l~~~l~~~~ 202 (274)
T 3t5d_A 176 ------HKIKIYEFPETDDEEENKLVKKIKDRL 202 (274)
T ss_dssp ------TTCCCCCC-----------CHHHHHTC
T ss_pred ------cCCeEEcCCCCCChhHHHHHHHHhcCC
Confidence 123355567889999988888887643
No 318
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=89.25 E-value=0.18 Score=48.51 Aligned_cols=23 Identities=30% Similarity=0.576 Sum_probs=19.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||+.++
T Consensus 18 ~~~~~i~v~G~~~~GKSsli~~l 40 (213)
T 3cph_A 18 DSIMKILLIGDSGVGKSCLLVRF 40 (213)
T ss_dssp --CEEEEEECSTTSSHHHHHHHH
T ss_pred CcceEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999765
No 319
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=89.19 E-value=0.18 Score=49.62 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=19.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 25 ~~~~ki~vvG~~~vGKSsL~~~l 47 (214)
T 3q3j_B 25 VARCKLVLVGDVQCGKTAMLQVL 47 (214)
T ss_dssp --CEEEEEECSTTSSHHHHHHHH
T ss_pred cceEEEEEECcCCCCHHHHHHHH
Confidence 45789999999999999999875
No 320
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=89.14 E-value=0.1 Score=49.83 Aligned_cols=26 Identities=15% Similarity=0.175 Sum_probs=8.7
Q ss_pred hhcceeeEEEeeccCCChhhHHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.....+||+|+|..++|||||+.++.
T Consensus 16 ~~~~~~~i~v~G~~~~GKssli~~l~ 41 (208)
T 2yc2_C 16 TATLRCKVAVVGEATVGKSALISMFT 41 (208)
T ss_dssp SEEEEEEEEEC---------------
T ss_pred ccccceEEEEECCCCCCHHHHHHHHH
Confidence 34567999999999999999998763
No 321
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=89.11 E-value=0.21 Score=47.28 Aligned_cols=26 Identities=23% Similarity=0.266 Sum_probs=20.9
Q ss_pred eEEEeeccCCChhhHHHHHHHHhcCC
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYGNK 455 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~~g 455 (844)
-|+|.|.+||||||+.|.+.-..+.+
T Consensus 5 ~i~l~G~~GsGKST~a~~La~~l~~~ 30 (178)
T 1qhx_A 5 MIILNGGSSAGKSGIVRCLQSVLPEP 30 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSSSC
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 47899999999999999876554433
No 322
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=89.07 E-value=0.22 Score=46.41 Aligned_cols=24 Identities=17% Similarity=0.025 Sum_probs=19.8
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.|+|.|..||||||+.|.+.-.++
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 478999999999999998854443
No 323
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=89.02 E-value=0.22 Score=49.02 Aligned_cols=25 Identities=24% Similarity=0.259 Sum_probs=21.3
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.+|.|+|..||||||+.|.+.-.|+
T Consensus 6 ~~i~i~G~~GsGKSTl~~~L~~~~g 30 (227)
T 1cke_A 6 PVITIDGPSGAGKGTLCKAMAEALQ 30 (227)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4799999999999999998865554
No 324
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=88.94 E-value=0.17 Score=50.71 Aligned_cols=26 Identities=23% Similarity=0.436 Sum_probs=20.6
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHh
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.--.+.|+|++||||||++|.+-=++
T Consensus 22 ~G~~~~lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 22 NIYPLVICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 34468899999999999999874433
No 325
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=88.91 E-value=0.18 Score=48.79 Aligned_cols=24 Identities=29% Similarity=0.337 Sum_probs=19.6
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+.---+.|+|+.||||||++|-+-
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr~l~ 54 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTRGML 54 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHH
Confidence 334468899999999999999763
No 326
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=88.89 E-value=0.22 Score=47.18 Aligned_cols=24 Identities=21% Similarity=0.474 Sum_probs=19.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..++|+|..||||||+.|.+.-.+
T Consensus 9 ~~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 9 HIYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCHHHHHHHHHHhh
Confidence 358899999999999999875433
No 327
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=88.88 E-value=0.22 Score=47.49 Aligned_cols=25 Identities=28% Similarity=0.304 Sum_probs=20.6
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
...|+|.|..||||||+.|.+.-.+
T Consensus 4 g~~I~l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3578999999999999999885333
No 328
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=88.81 E-value=0.21 Score=52.23 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=20.6
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..++.|+|.+||||||++|-+-=+.
T Consensus 2 ~f~v~lvG~nGaGKSTLln~L~g~~ 26 (270)
T 3sop_A 2 DFNIMVVGQSGLGKSTLVNTLFKSQ 26 (270)
T ss_dssp EEEEEEEESSSSSHHHHHHHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHhCCC
Confidence 3679999999999999998765443
No 329
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=88.64 E-value=0.23 Score=49.80 Aligned_cols=23 Identities=30% Similarity=0.478 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|||.+++|||||+.++
T Consensus 35 ~~~~kVvlvG~~~vGKSSLl~r~ 57 (211)
T 2g3y_A 35 NTYYRVVLIGEQGVGKSTLANIF 57 (211)
T ss_dssp CCEEEEEEECCTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45799999999999999999875
No 330
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=88.63 E-value=0.34 Score=50.49 Aligned_cols=51 Identities=16% Similarity=0.158 Sum_probs=34.6
Q ss_pred CCcccceeccCCccEEEEEeecccccccccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCCCcEEEEecccchhh
Q 042025 659 NEGCKWVEMFEDVRVVVFCVALSDYDQMWICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKDTPFVLILNKYDLFE 735 (844)
Q Consensus 659 seR~KW~~~FedV~aIIFVVdLSDYDq~l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~tpiILfLNK~DLfe 735 (844)
..++.......++|.||+|+|..+ ... ..|.+.+ ++ +.|.||++||.||..
T Consensus 10 ka~~~~~~~l~~~D~vl~VvDar~-------P~~------~~~~~l~------------ll-~k~~iivlNK~DL~~ 60 (262)
T 3cnl_A 10 KAKRQIKDLLRLVNTVVEVRDARA-------PFA------TSAYGVD------------FS-RKETIILLNKVDIAD 60 (262)
T ss_dssp CTTHHHHHHHTTCSEEEEEEETTS-------TTT------TSCTTSC------------CT-TSEEEEEEECGGGSC
T ss_pred HHHHHHHHHHhhCCEEEEEeeCCC-------CCc------CcChHHH------------hc-CCCcEEEEECccCCC
Confidence 344556667889999999999885 111 1232111 12 789999999999964
No 331
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=88.62 E-value=0.21 Score=52.95 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=19.4
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.-.+||+|+|.+|+||||+++.+
T Consensus 16 ~~~~~I~lvG~nG~GKSTLl~~L 38 (301)
T 2qnr_A 16 GFEFTLMVVGESGLGKSTLINSL 38 (301)
T ss_dssp --CEEEEEEEETTSSHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHH
Confidence 34589999999999999999984
No 332
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=88.61 E-value=0.16 Score=49.80 Aligned_cols=22 Identities=36% Similarity=0.543 Sum_probs=20.2
Q ss_pred cceeeEEEeeccCCChhhHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQ 447 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQ 447 (844)
...+||+|+|..++|||||+++
T Consensus 13 ~~~~ki~v~G~~~~GKSsli~~ 34 (221)
T 3gj0_A 13 QVQFKLVLVGDGGTGKTTFVKR 34 (221)
T ss_dssp CCEEEEEEEECTTSSHHHHHTT
T ss_pred ccceEEEEECCCCCCHHHHHHH
Confidence 4678999999999999999987
No 333
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=88.60 E-value=0.21 Score=48.07 Aligned_cols=29 Identities=31% Similarity=0.382 Sum_probs=21.5
Q ss_pred hhhhhcceeeEEEeeccCCChhhHHHHHH
Q 042025 421 NYLEQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 421 ~~Le~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.++...+..-|+|.|..||||||+.+.+.
T Consensus 6 ~~~~~~~~~~i~l~G~~GsGKsT~~~~L~ 34 (186)
T 2yvu_A 6 TYKCIEKGIVVWLTGLPGSGKTTIATRLA 34 (186)
T ss_dssp --CCCSCCEEEEEECCTTSSHHHHHHHHH
T ss_pred cccccCCCcEEEEEcCCCCCHHHHHHHHH
Confidence 33333455678999999999999999764
No 334
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=88.48 E-value=0.23 Score=48.23 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=19.2
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
+|.|.|..||||||+.|.+.-
T Consensus 3 ~i~i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHH
Confidence 689999999999999998866
No 335
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=88.45 E-value=0.19 Score=51.38 Aligned_cols=24 Identities=25% Similarity=0.407 Sum_probs=19.5
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-.+.|+|++||||||++|-+-=++
T Consensus 32 e~~~iiG~nGsGKSTLl~~l~Gl~ 55 (235)
T 3tif_A 32 EFVSIMGPSGSGKSTMLNIIGCLD 55 (235)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhcCC
Confidence 468899999999999998764333
No 336
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=88.44 E-value=0.13 Score=50.15 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=21.0
Q ss_pred hcceeeEEEeeccCCChhhHHHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.....||+|+|..++|||||++++
T Consensus 26 ~~~~~~i~v~G~~~~GKSslin~l 49 (223)
T 4dhe_A 26 PTVQPEIAFAGRSNAGKSTAINVL 49 (223)
T ss_dssp CCCSCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHH
Confidence 356789999999999999999875
No 337
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=88.43 E-value=0.22 Score=49.29 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=20.6
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+..||+|+|..++|||||+.++
T Consensus 27 ~~~~kI~vvG~~~vGKSsLin~l 49 (228)
T 2qu8_A 27 PHKKTIILSGAPNVGKSSFMNIV 49 (228)
T ss_dssp TTSEEEEEECSTTSSHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHH
Confidence 35689999999999999999975
No 338
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=88.43 E-value=0.24 Score=46.99 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=19.5
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.|+|.|..||||||+.+.+.--+
T Consensus 3 ~I~i~G~~GsGKsT~~~~L~~~l 25 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLAKVKEIL 25 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 58899999999999999886443
No 339
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=88.42 E-value=0.27 Score=48.13 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=20.1
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
....-|.|+|.+||||||+.|.+-
T Consensus 23 ~~g~~i~l~G~sGsGKSTl~~~La 46 (200)
T 3uie_A 23 QKGCVIWVTGLSGSGKSTLACALN 46 (200)
T ss_dssp SCCEEEEEECSTTSSHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHH
Confidence 445568899999999999999874
No 340
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=88.41 E-value=0.24 Score=51.00 Aligned_cols=21 Identities=29% Similarity=0.553 Sum_probs=19.6
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
..||+|+|.+++||||+++++
T Consensus 3 ~~~i~lvG~~g~GKTTL~n~l 23 (271)
T 3k53_A 3 LKTVALVGNPNVGKTTIFNAL 23 (271)
T ss_dssp CEEEEEEECSSSSHHHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999987
No 341
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=88.40 E-value=0.19 Score=48.00 Aligned_cols=22 Identities=18% Similarity=0.299 Sum_probs=19.2
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..-++|+|++|+||||+++.+-
T Consensus 38 g~~~~l~G~~G~GKTtL~~~i~ 59 (180)
T 3ec2_A 38 GKGLTFVGSPGVGKTHLAVATL 59 (180)
T ss_dssp CCEEEECCSSSSSHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHH
Confidence 3568999999999999999874
No 342
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=88.39 E-value=0.26 Score=48.19 Aligned_cols=29 Identities=14% Similarity=0.353 Sum_probs=23.6
Q ss_pred hhhhhhcceeeEEEeeccCCChhhHHHHH
Q 042025 420 PNYLEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 420 d~~Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+..++..+++++|..+|||||++.++
T Consensus 22 ~~~~~~~~~~~i~i~G~~g~GKTTl~~~l 50 (221)
T 2wsm_A 22 REALRESGTVAVNIMGAIGSGKTLLIERT 50 (221)
T ss_dssp HHHHHHHTCEEEEEEECTTSCHHHHHHHH
T ss_pred HHhhcccCceEEEEEcCCCCCHHHHHHHH
Confidence 33444567789999999999999999875
No 343
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=88.34 E-value=0.21 Score=50.71 Aligned_cols=22 Identities=27% Similarity=0.474 Sum_probs=18.4
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
.+.|+|++||||||++|-+-=+
T Consensus 32 ~~~iiG~nGsGKSTLl~~l~Gl 53 (224)
T 2pcj_A 32 FVSIIGASGSGKSTLLYILGLL 53 (224)
T ss_dssp EEEEEECTTSCHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 5789999999999999876433
No 344
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=88.33 E-value=0.11 Score=50.50 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=20.1
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 9 ~~~~ki~vvG~~~~GKSsli~~l 31 (218)
T 4djt_A 9 ELTYKICLIGDGGVGKTTYINRV 31 (218)
T ss_dssp -CEEEEEEECCTTSSHHHHHCBC
T ss_pred cCccEEEEECCCCCCHHHHHHHH
Confidence 46799999999999999999864
No 345
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=88.18 E-value=0.22 Score=48.88 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=19.6
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.-|+|+|++||||||+.+.+.-.+
T Consensus 13 ~~i~l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 13 PPLVVCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHhC
Confidence 357899999999999999875433
No 346
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=88.18 E-value=0.2 Score=50.77 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=18.5
Q ss_pred eeEEEeeccCCChhhHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKi 450 (844)
--+.|+|++||||||++|.+.=
T Consensus 17 ~ii~l~GpsGsGKSTLlk~L~g 38 (219)
T 1s96_A 17 TLYIVSAPSGAGKSSLIQALLK 38 (219)
T ss_dssp CEEEEECCTTSCHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHhc
Confidence 3578999999999999997643
No 347
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=88.11 E-value=0.25 Score=48.88 Aligned_cols=23 Identities=22% Similarity=0.183 Sum_probs=19.3
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-+.|+|++||||||+++.+.-.+
T Consensus 10 ~i~l~GpsGsGKsTl~~~L~~~~ 32 (208)
T 3tau_A 10 LIVLSGPSGVGKGTVREAVFKDP 32 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHHST
T ss_pred EEEEECcCCCCHHHHHHHHHhhC
Confidence 47889999999999999875444
No 348
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=88.07 E-value=0.22 Score=48.55 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=18.0
Q ss_pred eEEEeeccCCChhhHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmK 449 (844)
-++|+|.+||||||+++++=
T Consensus 25 ~~~i~G~~GsGKTtl~~~l~ 44 (235)
T 2w0m_A 25 FIALTGEPGTGKTIFSLHFI 44 (235)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHH
Confidence 47889999999999999975
No 349
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=88.06 E-value=0.22 Score=47.41 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=19.9
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+|+|.|..||||||+.|.+--.++
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l~ 29 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDLD 29 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHcC
Confidence 589999999999999998754333
No 350
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=88.04 E-value=0.24 Score=48.78 Aligned_cols=23 Identities=26% Similarity=0.511 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||+.++
T Consensus 11 ~~~~ki~v~G~~~vGKSsli~~l 33 (223)
T 3cpj_B 11 DLLFKIVLIGDSGVGKSNLLSRF 33 (223)
T ss_dssp CEEEEEEEESCTTSSHHHHHHHH
T ss_pred CeeeEEEEECcCCCCHHHHHHHH
Confidence 55789999999999999999865
No 351
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=87.96 E-value=0.27 Score=47.89 Aligned_cols=24 Identities=17% Similarity=0.378 Sum_probs=20.0
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..|+|.|..||||||+.|.+.-.+
T Consensus 19 ~~I~l~G~~GsGKSTla~~L~~~l 42 (202)
T 3t61_A 19 GSIVVMGVSGSGKSSVGEAIAEAC 42 (202)
T ss_dssp SCEEEECSTTSCHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 368999999999999999875443
No 352
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=87.93 E-value=0.3 Score=47.71 Aligned_cols=27 Identities=26% Similarity=0.349 Sum_probs=21.9
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+--.|+|+|..||||||+.|.+.-.++
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l~ 50 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKLN 50 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 344789999999999999998864444
No 353
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=87.80 E-value=0.26 Score=47.28 Aligned_cols=24 Identities=38% Similarity=0.512 Sum_probs=20.0
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.|.|.|..||||||+.|.+.-.++
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~ 25 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLG 25 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHC
T ss_pred EEEEECCCccCHHHHHHHHHHhcC
Confidence 588999999999999998765443
No 354
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=87.75 E-value=0.31 Score=46.40 Aligned_cols=24 Identities=29% Similarity=0.468 Sum_probs=20.5
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
-.+|+|.+|||||||++.+..+..
T Consensus 28 ~~~i~G~NGsGKStll~ai~~~l~ 51 (182)
T 3kta_A 28 FTAIVGANGSGKSNIGDAILFVLG 51 (182)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHTT
T ss_pred cEEEECCCCCCHHHHHHHHHHHHc
Confidence 468999999999999999876654
No 355
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=87.57 E-value=0.27 Score=47.52 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=21.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
+...|+|.|..||||||+.|.+.-.
T Consensus 9 ~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 9 KGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHh
Confidence 3457999999999999999987654
No 356
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=87.55 E-value=0.23 Score=50.01 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.6
Q ss_pred eEEEeeccCCChhhHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmK 449 (844)
.+.|+|++||||||++|-+-
T Consensus 24 ~~~liG~nGsGKSTLl~~l~ 43 (208)
T 3b85_A 24 IVFGLGPAGSGKTYLAMAKA 43 (208)
T ss_dssp EEEEECCTTSSTTHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 47889999999999998764
No 357
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=87.52 E-value=0.25 Score=50.99 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=20.6
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHh
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.--.+.|+|++||||||++|-+-=++
T Consensus 34 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~ 59 (247)
T 2ff7_A 34 QGEVIGIVGRSGSGKSTLTKLIQRFY 59 (247)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 33468899999999999999764443
No 358
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=87.44 E-value=0.25 Score=50.54 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=19.6
Q ss_pred eeeEEEeeccCCChhhHHHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
--.+.|+|++||||||++|-+-=+
T Consensus 31 Ge~~~i~G~nGsGKSTLl~~l~Gl 54 (237)
T 2cbz_A 31 GALVAVVGQVGCGKSSLLSALLAE 54 (237)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHhcC
Confidence 346889999999999999976433
No 359
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=87.43 E-value=0.27 Score=50.74 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+.+||+|+|..++||||||.++
T Consensus 3 ~~~~kI~lvG~~nvGKTsL~n~l 25 (258)
T 3a1s_A 3 LHMVKVALAGCPNVGKTSLFNAL 25 (258)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 34689999999999999999987
No 360
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=87.40 E-value=0.27 Score=46.65 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=20.2
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..|+|.|..||||||+.|.+.-.+
T Consensus 4 ~~I~i~G~~GsGKsT~~~~L~~~l 27 (192)
T 1kht_A 4 KVVVVTGVPGVGSTTSSQLAMDNL 27 (192)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHH
Confidence 368999999999999999886533
No 361
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=87.34 E-value=0.26 Score=50.52 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=19.9
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
.--.+.|+|++||||||++|-+-=+
T Consensus 27 ~Ge~~~i~G~nGsGKSTLl~~l~Gl 51 (243)
T 1mv5_A 27 PNSIIAFAGPSGGGKSTIFSLLERF 51 (243)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC
Confidence 3447899999999999999875433
No 362
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=87.33 E-value=0.25 Score=50.15 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=18.1
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
-.+.|+|++||||||++|-+-
T Consensus 36 e~~~iiG~NGsGKSTLlk~l~ 56 (214)
T 1sgw_A 36 NVVNFHGPNGIGKTTLLKTIS 56 (214)
T ss_dssp CCEEEECCTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 367899999999999998763
No 363
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=87.33 E-value=0.32 Score=46.34 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=20.1
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.-|+|.|..||||||+.+.+.--+
T Consensus 6 ~~I~l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 6 ALIIVTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc
Confidence 468899999999999999886433
No 364
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=87.32 E-value=0.34 Score=47.93 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=22.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+...|+|.|..||||||+.|.+.-.++
T Consensus 3 ~~~~I~l~G~~GsGKsT~a~~La~~l~ 29 (220)
T 1aky_A 3 ESIRMVLIGPPGAGKGTQAPNLQERFH 29 (220)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 346799999999999999998765443
No 365
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=87.32 E-value=0.25 Score=50.92 Aligned_cols=23 Identities=30% Similarity=0.411 Sum_probs=19.2
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 25 e~~~liG~nGsGKSTLl~~l~Gl 47 (240)
T 2onk_A 25 DYCVLLGPTGAGKSVFLELIAGI 47 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTS
T ss_pred EEEEEECCCCCCHHHHHHHHhCC
Confidence 46789999999999999876533
No 366
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=87.29 E-value=0.25 Score=50.64 Aligned_cols=23 Identities=35% Similarity=0.473 Sum_probs=18.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 33 e~~~l~G~nGsGKSTLl~~l~Gl 55 (240)
T 1ji0_A 33 QIVTLIGANGAGKTTTLSAIAGL 55 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 35789999999999999876433
No 367
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=87.24 E-value=0.25 Score=52.10 Aligned_cols=24 Identities=29% Similarity=0.465 Sum_probs=19.7
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-.+.|+|++||||||++|-+-=++
T Consensus 35 e~~~iiGpnGsGKSTLl~~l~Gl~ 58 (275)
T 3gfo_A 35 EVTAILGGNGVGKSTLFQNFNGIL 58 (275)
T ss_dssp SEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHcCC
Confidence 457899999999999999775443
No 368
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=87.21 E-value=0.29 Score=45.81 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=20.4
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+|+|.|..||||||+.|.+.-.++
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l~ 25 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSLN 25 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 689999999999999998865443
No 369
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=87.15 E-value=0.25 Score=50.87 Aligned_cols=22 Identities=36% Similarity=0.323 Sum_probs=18.7
Q ss_pred eeEEEeeccCCChhhHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKi 450 (844)
-.+.|+|++||||||++|-+-=
T Consensus 30 e~~~l~G~nGsGKSTLlk~l~G 51 (250)
T 2d2e_A 30 EVHALMGPNGAGKSTLGKILAG 51 (250)
T ss_dssp CEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 3588999999999999987653
No 370
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=87.13 E-value=0.25 Score=51.07 Aligned_cols=21 Identities=29% Similarity=0.540 Sum_probs=18.1
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
-.+.|+|++||||||++|-+-
T Consensus 34 e~~~liG~nGsGKSTLlk~l~ 54 (257)
T 1g6h_A 34 DVTLIIGPNGSGKSTLINVIT 54 (257)
T ss_dssp CEEEEECSTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 357899999999999998764
No 371
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=87.11 E-value=0.25 Score=51.40 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
.--.++|+|+.||||||++|-+--+
T Consensus 24 ~g~~v~i~Gp~GsGKSTll~~l~g~ 48 (261)
T 2eyu_A 24 KMGLILVTGPTGSGKSTTIASMIDY 48 (261)
T ss_dssp SSEEEEEECSTTCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCccHHHHHHHHHHh
Confidence 3446899999999999999976433
No 372
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=87.10 E-value=0.29 Score=46.71 Aligned_cols=24 Identities=33% Similarity=0.509 Sum_probs=19.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..|+|.|..||||||+.|.+.-.+
T Consensus 6 ~~i~l~G~~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGLMGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHh
Confidence 368899999999999999875433
No 373
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=87.08 E-value=0.3 Score=47.62 Aligned_cols=21 Identities=29% Similarity=0.175 Sum_probs=18.9
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
.|.|+|..||||||+.|.+.-
T Consensus 4 ~i~l~G~~GsGKST~~~~La~ 24 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIANLFTD 24 (206)
T ss_dssp EEEEECSTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 578999999999999998865
No 374
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=86.93 E-value=0.26 Score=51.21 Aligned_cols=23 Identities=30% Similarity=0.632 Sum_probs=18.7
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
--+.|+|++||||||++|-+-=+
T Consensus 33 e~~~liG~nGsGKSTLlk~l~Gl 55 (262)
T 1b0u_A 33 DVISIIGSSGSGKSTFLRCINFL 55 (262)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 35789999999999999876433
No 375
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=86.93 E-value=0.36 Score=49.26 Aligned_cols=27 Identities=30% Similarity=0.402 Sum_probs=22.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
....|+|.|.+||||||+.+.+.-.++
T Consensus 31 ~~~~i~l~G~~GsGKSTla~~L~~~l~ 57 (253)
T 2p5t_B 31 QPIAILLGGQSGAGKTTIHRIKQKEFQ 57 (253)
T ss_dssp SCEEEEEESCGGGTTHHHHHHHHHHTT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 345799999999999999998865443
No 376
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=86.88 E-value=0.35 Score=52.15 Aligned_cols=37 Identities=14% Similarity=0.285 Sum_probs=27.1
Q ss_pred CchhhhhhcceeeEEEeeccCCChhhHHHHHHHHhcC
Q 042025 418 TVPNYLEQKKVQKLLLLGLQGAGTSTIFKQAKFLYGN 454 (844)
Q Consensus 418 ~Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmKiLy~~ 454 (844)
-||..++..-.-|+.|+|++||||||++|.+-=+|..
T Consensus 160 ~v~~~v~~~lg~k~~IvG~nGsGKSTLlk~L~gl~~~ 196 (365)
T 1lw7_A 160 FIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNT 196 (365)
T ss_dssp GSCTTTGGGTCEEEEEECCTTSHHHHHHHHHHHHTTC
T ss_pred hCCHHHHHhhhCeEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3443333322468999999999999999998767654
No 377
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=86.82 E-value=0.29 Score=49.78 Aligned_cols=22 Identities=27% Similarity=0.366 Sum_probs=18.6
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
--.+.|+|++||||||++|-+-
T Consensus 34 Ge~~~i~G~nGsGKSTLl~~l~ 55 (229)
T 2pze_A 34 GQLLAVAGSTGAGKTSLLMMIM 55 (229)
T ss_dssp TCEEEEECCTTSSHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHh
Confidence 3468899999999999998764
No 378
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=86.81 E-value=0.22 Score=49.74 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=14.2
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
--+.|+|++||||||++|.+.
T Consensus 28 ~ii~l~Gp~GsGKSTl~~~L~ 48 (231)
T 3lnc_A 28 VILVLSSPSGCGKTTVANKLL 48 (231)
T ss_dssp CEEEEECSCC----CHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
Confidence 357899999999999999875
No 379
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=86.79 E-value=0.38 Score=47.44 Aligned_cols=24 Identities=33% Similarity=0.433 Sum_probs=20.5
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+|+|.|..||||||+.+.+.--++
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~g 25 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 689999999999999998865443
No 380
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=86.69 E-value=0.36 Score=46.54 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=20.4
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..|+|.|..||||||+.+.+.--+
T Consensus 5 ~~I~i~G~~GsGKsT~~~~L~~~l 28 (213)
T 2plr_A 5 VLIAFEGIDGSGKSSQATLLKDWI 28 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHH
Confidence 468999999999999999886443
No 381
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=86.66 E-value=0.4 Score=48.54 Aligned_cols=27 Identities=19% Similarity=0.138 Sum_probs=22.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHh
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
+....+.|+|+.||||||++|.+.-++
T Consensus 23 ~~g~iigI~G~~GsGKSTl~k~L~~~l 49 (245)
T 2jeo_A 23 MRPFLIGVSGGTASGKSTVCEKIMELL 49 (245)
T ss_dssp CCSEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 444568999999999999999886554
No 382
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=86.66 E-value=0.31 Score=50.94 Aligned_cols=23 Identities=17% Similarity=0.497 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
..+||+|+|.+++||||||+++-
T Consensus 2 ~~~kI~lvG~~nvGKSTL~n~L~ 24 (272)
T 3b1v_A 2 SMTEIALIGNPNSGKTSLFNLIT 24 (272)
T ss_dssp -CEEEEEECCTTSSHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHH
Confidence 35799999999999999999873
No 383
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=86.65 E-value=0.28 Score=50.82 Aligned_cols=21 Identities=38% Similarity=0.599 Sum_probs=18.2
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
-.+.|+|++||||||++|-+-
T Consensus 27 e~~~liG~NGsGKSTLlk~l~ 47 (249)
T 2qi9_C 27 EILHLVGPNGAGKSTLLARMA 47 (249)
T ss_dssp CEEEEECCTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHh
Confidence 358899999999999998764
No 384
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=86.60 E-value=0.28 Score=51.26 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=19.9
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
--.+.|+|++||||||++|-+-=++
T Consensus 37 Ge~~~liG~nGsGKSTLl~~l~Gl~ 61 (266)
T 4g1u_C 37 GEMVAIIGPNGAGKSTLLRLLTGYL 61 (266)
T ss_dssp TCEEEEECCTTSCHHHHHHHHTSSS
T ss_pred CCEEEEECCCCCcHHHHHHHHhcCC
Confidence 3467899999999999998765433
No 385
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=86.53 E-value=0.37 Score=46.02 Aligned_cols=30 Identities=33% Similarity=0.496 Sum_probs=22.8
Q ss_pred eEEEeeccCCChhhHHHHHHHHhcCC-CCHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYGNK-FTAE 459 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~~g-FS~e 459 (844)
.|+|.|..||||||+.|.+.-.++-. ++.+
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~lg~~~id~D 34 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 34 (184)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHcCCCEEeCc
Confidence 58999999999999999886544432 4444
No 386
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=86.52 E-value=0.29 Score=50.96 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=18.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 42 ei~~l~G~NGsGKSTLlk~l~Gl 64 (256)
T 1vpl_A 42 EIFGLIGPNGAGKTTTLRIISTL 64 (256)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred cEEEEECCCCCCHHHHHHHHhcC
Confidence 35789999999999999876433
No 387
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=86.51 E-value=0.35 Score=48.93 Aligned_cols=23 Identities=22% Similarity=0.418 Sum_probs=20.1
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++||||++..+
T Consensus 20 ~~~~~I~lvG~~g~GKStl~n~l 42 (260)
T 2xtp_A 20 RSELRIILVGKTGTGKSAAGNSI 42 (260)
T ss_dssp -CCEEEEEEECTTSCHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHH
Confidence 45789999999999999999875
No 388
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=86.44 E-value=0.3 Score=50.65 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=18.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 32 e~~~l~G~nGsGKSTLl~~l~Gl 54 (253)
T 2nq2_C 32 DILAVLGQNGCGKSTLLDLLLGI 54 (253)
T ss_dssp CEEEEECCSSSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 35789999999999999876433
No 389
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=86.40 E-value=0.35 Score=49.37 Aligned_cols=23 Identities=30% Similarity=0.514 Sum_probs=20.1
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++||||++..+
T Consensus 19 ~~~l~I~lvG~~g~GKSSlin~l 41 (247)
T 3lxw_A 19 ESTRRLILVGRTGAGKSATGNSI 41 (247)
T ss_dssp -CEEEEEEESSTTSSHHHHHHHH
T ss_pred CCceEEEEECCCCCcHHHHHHHH
Confidence 45789999999999999999865
No 390
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=86.38 E-value=0.31 Score=50.63 Aligned_cols=23 Identities=35% Similarity=0.346 Sum_probs=19.3
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.--.+.|+|++||||||++|-+-
T Consensus 45 ~Ge~~~i~G~nGsGKSTLl~~l~ 67 (260)
T 2ghi_A 45 SGTTCALVGHTGSGKSTIAKLLY 67 (260)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHh
Confidence 33468999999999999999764
No 391
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=86.29 E-value=0.31 Score=47.34 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=23.3
Q ss_pred Cchhhhh--hcceeeEEEeeccCCChhhHHHHHHH
Q 042025 418 TVPNYLE--QKKVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 418 ~Id~~Le--~k~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.+|+.|. -.+---++|+|.+||||||+++|+=.
T Consensus 8 ~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 8 SLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGL 42 (220)
T ss_dssp HHHHHTTSSBCTTSEEEEECSTTSSHHHHHHHHHH
T ss_pred HHHHhhcCCCcCCEEEEEECCCCCCHHHHHHHHHH
Confidence 3455553 12233589999999999999999843
No 392
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=86.28 E-value=0.45 Score=45.14 Aligned_cols=24 Identities=29% Similarity=0.343 Sum_probs=19.9
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
..|+|.|..||||||+.+.+.-.+
T Consensus 4 ~~I~l~G~~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 4 LVVFVLGGPGAGKGTQCARIVEKY 27 (196)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 458999999999999999875433
No 393
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=86.24 E-value=0.32 Score=50.92 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=20.2
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
--.+.|+|++||||||++|-+-=++
T Consensus 45 Ge~~~i~G~nGsGKSTLlk~l~Gl~ 69 (271)
T 2ixe_A 45 GKVTALVGPNGSGKSTVAALLQNLY 69 (271)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCHHHHHHHHhcCC
Confidence 3468899999999999999765444
No 394
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=86.19 E-value=0.42 Score=46.47 Aligned_cols=28 Identities=32% Similarity=0.356 Sum_probs=22.7
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.+...|+|.|..||||||+.|.+.-.++
T Consensus 18 ~~~~~I~l~G~~GsGKST~a~~La~~l~ 45 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQAVKLAEKLG 45 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4456799999999999999998865443
No 395
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=86.18 E-value=0.31 Score=51.01 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=18.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 51 ei~~liG~NGsGKSTLlk~l~Gl 73 (263)
T 2olj_A 51 EVVVVIGPSGSGKSTFLRCLNLL 73 (263)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEEcCCCCcHHHHHHHHHcC
Confidence 35789999999999999876433
No 396
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=86.12 E-value=0.31 Score=50.75 Aligned_cols=23 Identities=35% Similarity=0.481 Sum_probs=18.9
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
-.+.|+|++||||||++|-+-=+
T Consensus 34 e~~~liG~nGsGKSTLl~~i~Gl 56 (266)
T 2yz2_A 34 ECLLVAGNTGSGKSTLLQIVAGL 56 (266)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 36789999999999999876433
No 397
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=86.00 E-value=0.33 Score=50.72 Aligned_cols=22 Identities=27% Similarity=0.652 Sum_probs=18.9
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
--.+.|+|++||||||++|-+-
T Consensus 30 Ge~~~i~G~NGsGKSTLlk~l~ 51 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLRAIS 51 (263)
T ss_dssp SSEEEEECCTTSSHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHh
Confidence 3468899999999999999764
No 398
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=85.98 E-value=0.32 Score=50.76 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=18.7
Q ss_pred eeEEEeeccCCChhhHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKi 450 (844)
-.+.|+|++||||||++|-+-=
T Consensus 47 e~~~l~G~NGsGKSTLlk~l~G 68 (267)
T 2zu0_C 47 EVHAIMGPNGSGKSTLSATLAG 68 (267)
T ss_dssp CEEEEECCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 3688999999999999987653
No 399
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=85.98 E-value=0.13 Score=49.70 Aligned_cols=23 Identities=35% Similarity=0.514 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
...+||+|+|..++|||||++++
T Consensus 31 ~~~~ki~vvG~~~~GKSsli~~l 53 (199)
T 3l0i_B 31 DYLFKLLLIGDSGVGKSCLLLRF 53 (199)
T ss_dssp SEEEEEEEECCTTSCCTTTTTSS
T ss_pred CcceEEEEECCCCCCHHHHHHHH
Confidence 45799999999999999999764
No 400
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=85.97 E-value=0.36 Score=48.02 Aligned_cols=25 Identities=16% Similarity=0.452 Sum_probs=20.9
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
...|+|.|..||||||+.|.+.--+
T Consensus 7 ~~~I~l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 7 LLRAVIMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHc
Confidence 3579999999999999999886434
No 401
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=85.93 E-value=0.44 Score=46.52 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=21.1
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
...|.|.|..||||||+.+.+.-.+
T Consensus 21 ~~~i~i~G~~GsGKSTl~~~L~~~~ 45 (207)
T 2qt1_A 21 TFIIGISGVTNSGKTTLAKNLQKHL 45 (207)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHTTS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHhc
Confidence 4578899999999999999886554
No 402
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=85.92 E-value=0.45 Score=45.73 Aligned_cols=24 Identities=21% Similarity=0.164 Sum_probs=20.9
Q ss_pred eeeEEEeeccCCChhhHHHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
...|.|.|..||||||+.|.+.-.
T Consensus 8 ~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 8 PIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHC
Confidence 457899999999999999988755
No 403
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=85.77 E-value=0.35 Score=50.97 Aligned_cols=22 Identities=36% Similarity=0.625 Sum_probs=18.5
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
--.+.|+|++||||||++|-+-
T Consensus 47 Ge~~~liG~NGsGKSTLlk~l~ 68 (279)
T 2ihy_A 47 GDKWILYGLNGAGKTTLLNILN 68 (279)
T ss_dssp TCEEEEECCTTSSHHHHHHHHT
T ss_pred CCEEEEECCCCCcHHHHHHHHh
Confidence 3468899999999999998664
No 404
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=85.74 E-value=0.48 Score=48.20 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=25.4
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc-CCCCHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG-NKFTAE 459 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~-~gFS~e 459 (844)
++..+|+|+|..||||||+.+.+.--|+ ..++.+
T Consensus 27 ~~~~~I~l~G~~GsGKsT~a~~L~~~~g~~~is~~ 61 (243)
T 3tlx_A 27 KPDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTG 61 (243)
T ss_dssp SCCEEEEEECCTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHhCCeEEecH
Confidence 4567899999999999999998854443 234443
No 405
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=85.58 E-value=0.35 Score=48.02 Aligned_cols=19 Identities=32% Similarity=0.648 Sum_probs=17.3
Q ss_pred eEEEeeccCCChhhHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQm 448 (844)
++.|+|.+||||||++|-+
T Consensus 3 ~i~i~G~nG~GKTTll~~l 21 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLIHKA 21 (189)
T ss_dssp CEEEESCCSSCHHHHHHHH
T ss_pred EEEEECCCCChHHHHHHHH
Confidence 5889999999999999875
No 406
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=85.36 E-value=0.46 Score=46.07 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=20.2
Q ss_pred ceeeEEEeeccCCChhhHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
+...|+|.|..||||||+.+.+.-
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~L~~ 31 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSRKLVE 31 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHH
Confidence 345689999999999999998753
No 407
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=85.29 E-value=0.43 Score=45.43 Aligned_cols=25 Identities=32% Similarity=0.445 Sum_probs=20.5
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
..|+|.|..||||||+.|.+.-.++
T Consensus 12 ~~i~i~G~~GsGKst~~~~l~~~~~ 36 (180)
T 3iij_A 12 PNILLTGTPGVGKTTLGKELASKSG 36 (180)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhC
Confidence 4689999999999999998754443
No 408
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=85.26 E-value=0.47 Score=46.01 Aligned_cols=23 Identities=26% Similarity=0.173 Sum_probs=19.7
Q ss_pred eeeEEEeeccCCChhhHHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
...|+|.|..||||||+.+.+.-
T Consensus 10 ~~~I~l~G~~GsGKST~~~~L~~ 32 (212)
T 2wwf_A 10 GKFIVFEGLDRSGKSTQSKLLVE 32 (212)
T ss_dssp SCEEEEEESTTSSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHH
Confidence 35689999999999999998753
No 409
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=85.22 E-value=0.55 Score=44.86 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=21.3
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
...|+|.|..||||||+.|.+.-.++
T Consensus 9 ~~~I~l~G~~GsGKsT~~~~La~~l~ 34 (196)
T 2c95_A 9 TNIIFVVGGPGSGKGTQCEKIVQKYG 34 (196)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 45689999999999999998864443
No 410
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=85.20 E-value=0.41 Score=45.50 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=18.3
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
.|.|.|..||||||+.+.+.-
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~ 22 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYE 22 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 478999999999999998753
No 411
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=85.20 E-value=0.5 Score=44.69 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=20.5
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
..|+|.|..||||||+.+.+.-.++
T Consensus 7 ~~I~l~G~~GsGKsT~~~~L~~~l~ 31 (194)
T 1qf9_A 7 NVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4688999999999999998864443
No 412
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=85.12 E-value=0.49 Score=48.45 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=21.0
Q ss_pred ceeeEEEeeccCCChhhHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+.+||+|+|..++||||++..+.
T Consensus 35 ~~~~I~lvG~~g~GKSSLin~l~ 57 (262)
T 3def_A 35 NSMTVLVLGKGGVGKSSTVNSLI 57 (262)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHh
Confidence 57999999999999999998764
No 413
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=85.05 E-value=0.38 Score=45.53 Aligned_cols=25 Identities=12% Similarity=0.073 Sum_probs=16.4
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
..|+|.|..||||||+.+.+.-.++
T Consensus 6 ~~I~l~G~~GsGKST~a~~La~~l~ 30 (183)
T 2vli_A 6 PIIWINGPFGVGKTHTAHTLHERLP 30 (183)
T ss_dssp CEEEEECCC----CHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHHhcC
Confidence 4588999999999999998854433
No 414
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=85.03 E-value=0.39 Score=47.42 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=24.6
Q ss_pred Cchhhhhh--cceeeEEEeeccCCChhhHHHHHHH
Q 042025 418 TVPNYLEQ--KKVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 418 ~Id~~Le~--k~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.+|+.|.- .+---++|+|.+||||||+++|+=.
T Consensus 12 ~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~~~l~~ 46 (243)
T 1n0w_A 12 ELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAV 46 (243)
T ss_dssp HHHHHTTTSEETTSEEEEECCTTSSHHHHHHHHHH
T ss_pred HHHHhhcCCCcCCeEEEEECCCCCcHHHHHHHHHH
Confidence 46666642 2233588999999999999999865
No 415
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=85.01 E-value=0.51 Score=45.16 Aligned_cols=26 Identities=23% Similarity=0.445 Sum_probs=21.5
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
...|+|.|..||||||+.|.+.-.++
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l~ 37 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKYG 37 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34689999999999999998865444
No 416
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=84.97 E-value=0.37 Score=52.37 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=30.1
Q ss_pred cCchhhhhhcceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 417 TTVPNYLEQKKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 417 ~~Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+.||..+.-.+-.++.|+|.+|+||||++|++==+..
T Consensus 60 ~ald~ll~i~~Gq~~gIiG~nGaGKTTLl~~I~g~~~ 96 (347)
T 2obl_A 60 RAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGAS 96 (347)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHSC
T ss_pred EEEEeeeeecCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 3677776667888999999999999999998765543
No 417
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=84.88 E-value=1.5 Score=42.89 Aligned_cols=27 Identities=19% Similarity=0.390 Sum_probs=22.7
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+..++..||+|+|.+++||||++.++-
T Consensus 33 ~~~~~~~~i~ivG~~gvGKTtl~~~l~ 59 (226)
T 2hf9_A 33 LNKHGVVAFDFMGAIGSGKTLLIEKLI 59 (226)
T ss_dssp HHHTTCEEEEEEESTTSSHHHHHHHHH
T ss_pred HHhCCCeEEEEEcCCCCCHHHHHHHHH
Confidence 344568999999999999999998763
No 418
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=84.82 E-value=0.41 Score=49.62 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=19.6
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-++|+|.+||||||+++|+=.+.
T Consensus 37 ~~~i~G~~G~GKTTl~~~ia~~~ 59 (296)
T 1cr0_A 37 VIMVTSGSGMGKSTFVRQQALQW 59 (296)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 47899999999999999976443
No 419
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=84.80 E-value=0.62 Score=49.75 Aligned_cols=25 Identities=36% Similarity=0.561 Sum_probs=21.0
Q ss_pred hhcceeeEEEeeccCCChhhHHHHH
Q 042025 424 EQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 424 e~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
-.++.+||+|+|..++|||||+.++
T Consensus 161 ~~~~~~kI~ivG~~~vGKSsLl~~l 185 (329)
T 3o47_A 161 FGKKEMRILMVGLDAAGKTTILYKL 185 (329)
T ss_dssp --CCSEEEEEEESTTSSHHHHHHHT
T ss_pred cccCcceEEEECCCCccHHHHHHHH
Confidence 3467899999999999999999775
No 420
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=84.76 E-value=0.51 Score=44.24 Aligned_cols=24 Identities=21% Similarity=0.497 Sum_probs=20.2
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.|+|.|..||||||+.|.+.-.++
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~lg 27 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVGRELARALG 27 (173)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhC
Confidence 588999999999999998865443
No 421
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=84.73 E-value=0.43 Score=50.62 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=18.3
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
-.+.|+|++||||||++|-+-
T Consensus 65 e~~~i~G~NGsGKSTLlk~l~ 85 (290)
T 2bbs_A 65 QLLAVAGSTGAGKTSLLMMIM 85 (290)
T ss_dssp CEEEEEESTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHh
Confidence 468899999999999998764
No 422
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=84.68 E-value=0.47 Score=51.56 Aligned_cols=16 Identities=19% Similarity=0.301 Sum_probs=13.3
Q ss_pred CCCcEEEEecccchhh
Q 042025 720 KDTPFVLILNKYDLFE 735 (844)
Q Consensus 720 ~~tpiILfLNK~DLfe 735 (844)
.+.|+||++||.|+..
T Consensus 173 ~~~piIlV~NK~Dl~~ 188 (361)
T 2qag_A 173 NKVNIVPVIAKADTLT 188 (361)
T ss_dssp S-SCEEEEEECCSSSC
T ss_pred cCCCEEEEEECCCCCC
Confidence 4689999999999875
No 423
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=84.65 E-value=0.42 Score=45.56 Aligned_cols=23 Identities=30% Similarity=0.390 Sum_probs=19.4
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
..|.|.|..||||||+.|.+.-.
T Consensus 6 ~~i~l~G~~GsGKST~~~~L~~~ 28 (179)
T 2pez_A 6 CTVWLTGLSGAGKTTVSMALEEY 28 (179)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHH
Confidence 45889999999999999987543
No 424
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=84.57 E-value=0.52 Score=46.24 Aligned_cols=24 Identities=25% Similarity=0.195 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
+...+.|+|.+||||||+++.+.-
T Consensus 21 ~~~~i~i~G~~GsGKstl~~~l~~ 44 (201)
T 1rz3_A 21 GRLVLGIDGLSRSGKTTLANQLSQ 44 (201)
T ss_dssp SSEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 345788999999999999998753
No 425
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=84.54 E-value=0.49 Score=49.93 Aligned_cols=22 Identities=36% Similarity=0.489 Sum_probs=19.5
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+||+|+|.+++|||||++++
T Consensus 2 ~~~KI~lvG~~~vGKSSLi~~l 23 (307)
T 3r7w_A 2 LGSKLLLMGRSGSGKSSMRSII 23 (307)
T ss_dssp CEEEEEEECCTTSSHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHH
Confidence 3579999999999999999864
No 426
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=84.53 E-value=0.46 Score=45.45 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=18.2
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
-|.|.|..||||||+.+.+.-
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~ 22 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQ 22 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 478999999999999998753
No 427
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=84.46 E-value=0.55 Score=48.24 Aligned_cols=22 Identities=23% Similarity=0.456 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+||+|+|..++||||++..+
T Consensus 38 ~~~~I~vvG~~g~GKSSLin~l 59 (270)
T 1h65_A 38 NSLTILVMGKGGVGKSSTVNSI 59 (270)
T ss_dssp CEEEEEEEESTTSSHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHH
Confidence 5799999999999999999875
No 428
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=84.46 E-value=0.5 Score=49.02 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=19.6
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+||+|+|..++||||++.++
T Consensus 3 ~~~I~lvG~~n~GKSTLin~l 23 (274)
T 3i8s_A 3 KLTIGLIGNPNSGKTTLFNQL 23 (274)
T ss_dssp CEEEEEEECTTSSHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999986
No 429
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=84.42 E-value=0.55 Score=43.53 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=21.0
Q ss_pred hhhhcceeeEEEeeccCCChhhHHHHH
Q 042025 422 YLEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 422 ~Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+......-+||.|..|+||||+++++
T Consensus 37 ~l~~~~~~~~ll~G~~G~GKT~l~~~~ 63 (195)
T 1jbk_A 37 VLQRRTKNNPVLIGEPGVGKTAIVEGL 63 (195)
T ss_dssp HHTSSSSCEEEEECCTTSCHHHHHHHH
T ss_pred HHhcCCCCceEEECCCCCCHHHHHHHH
Confidence 344444456899999999999999865
No 430
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=84.37 E-value=0.55 Score=47.28 Aligned_cols=24 Identities=38% Similarity=0.414 Sum_probs=20.7
Q ss_pred eEEEeeccCCChhhHHHHHHHHhc
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.|+|+|++||||+|..+.+---|+
T Consensus 2 ~Iil~GpPGsGKgTqa~~La~~~g 25 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAKRLAKEKG 25 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
Confidence 689999999999999988766664
No 431
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=84.35 E-value=0.61 Score=45.16 Aligned_cols=27 Identities=30% Similarity=0.404 Sum_probs=21.6
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+...|+|.|..||||||+.+.+.--++
T Consensus 14 ~~~~I~l~G~~GsGKsT~~~~L~~~~g 40 (203)
T 1ukz_A 14 QVSVIFVLGGPGAGKGTQCEKLVKDYS 40 (203)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHcC
Confidence 345789999999999999998864443
No 432
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=84.25 E-value=0.56 Score=44.13 Aligned_cols=26 Identities=27% Similarity=0.568 Sum_probs=20.7
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
-+-|+|.|..||||||+.|.+.-.++
T Consensus 7 ~~~i~l~G~~GsGKSTva~~La~~lg 32 (168)
T 1zuh_A 7 MQHLVLIGFMGSGKSSLAQELGLALK 32 (168)
T ss_dssp -CEEEEESCTTSSHHHHHHHHHHHHT
T ss_pred cceEEEECCCCCCHHHHHHHHHHHhC
Confidence 35688999999999999998865443
No 433
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=84.24 E-value=0.45 Score=49.04 Aligned_cols=21 Identities=29% Similarity=0.162 Sum_probs=18.7
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
-++|+|.+||||||+++|+=.
T Consensus 32 i~~i~G~~GsGKTtl~~~l~~ 52 (279)
T 1nlf_A 32 VGALVSPGGAGKSMLALQLAA 52 (279)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHH
Confidence 578999999999999999864
No 434
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=84.20 E-value=0.46 Score=48.64 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=19.2
Q ss_pred eeeEEEeeccCCChhhHHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmK 449 (844)
...|.|+|..||||||++|.+-
T Consensus 27 g~~I~I~G~~GsGKSTl~k~La 48 (252)
T 4e22_A 27 APVITVDGPSGAGKGTLCKALA 48 (252)
T ss_dssp SCEEEEECCTTSSHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHH
Confidence 3478999999999999999874
No 435
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=84.08 E-value=0.54 Score=45.28 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=20.7
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHh
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
...|.|.|..||||||+.+.+.-.+
T Consensus 4 ~~~I~l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 4 GALIVFEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHTS
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 3468999999999999999876544
No 436
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=83.93 E-value=0.56 Score=47.91 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=21.7
Q ss_pred hcceeeEEEeecc---------CCChhhHHHHHH
Q 042025 425 QKKVQKLLLLGLQ---------GAGTSTIFKQAK 449 (844)
Q Consensus 425 ~k~~iKLLLLGsg---------eSGKSTI~KQmK 449 (844)
....+||+|+|.+ ++|||||++++-
T Consensus 16 ~~~~~ki~lvG~~~~~~~~~~~~vGKSsLi~~l~ 49 (255)
T 3c5h_A 16 FQGTYNISVVGLSGTEKEKGQCGIGKSCLCNRFV 49 (255)
T ss_dssp CCSCEEEEEEESCCCTTTTTTCCCSHHHHHHHHH
T ss_pred CCceeEEEEECCCccccccCCCCcCHHHHHHHHH
Confidence 3557899999999 999999999863
No 437
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=83.91 E-value=0.45 Score=50.00 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=20.1
Q ss_pred ceeeEEEeeccCCChhhHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
+..-|+|.|++||||||+.|.+.-
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~ 55 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFE 55 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 345688999999999999998753
No 438
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=83.85 E-value=0.34 Score=47.06 Aligned_cols=22 Identities=23% Similarity=0.379 Sum_probs=18.5
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
-|.+.|..||||||+++.+.-.
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~ 23 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGA 23 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHH
Confidence 3788999999999999987533
No 439
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=83.70 E-value=0.47 Score=48.75 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=17.0
Q ss_pred EEEeeccCCChhhHHHHHH
Q 042025 431 LLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmK 449 (844)
++|.|..||||||+.+++-
T Consensus 4 i~I~G~~GSGKSTla~~La 22 (253)
T 2ze6_A 4 HLIYGPTCSGKTDMAIQIA 22 (253)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHH
Confidence 6789999999999999863
No 440
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=83.69 E-value=0.64 Score=45.97 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=23.6
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc-CCCCHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG-NKFTAE 459 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~-~gFS~e 459 (844)
..|+|.|..||||||+.|.+.--++ ..++-+
T Consensus 6 ~~I~l~G~~GsGKsT~~~~La~~l~~~~i~~d 37 (222)
T 1zak_A 6 LKVMISGAPASGKGTQCELIKTKYQLAHISAG 37 (222)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCCEECCHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCceecHH
Confidence 5789999999999999998854443 335544
No 441
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=83.65 E-value=0.57 Score=46.69 Aligned_cols=19 Identities=32% Similarity=0.586 Sum_probs=16.8
Q ss_pred EEEeeccCCChhhHHHHHH
Q 042025 431 LLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmK 449 (844)
|+|.|++||||+||+|.+.
T Consensus 4 IVi~GPSG~GK~Tl~~~L~ 22 (186)
T 1ex7_A 4 IVISGPSGTGKSTLLKKLF 22 (186)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 6899999999999998753
No 442
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=83.51 E-value=0.42 Score=45.46 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=24.1
Q ss_pred CchhhhhhcceeeEEEeeccCCChhhHHHHHH
Q 042025 418 TVPNYLEQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 418 ~Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+-+.++..+.-.+||.|..|+||||+++++-
T Consensus 28 ~l~~~l~~~~~~~~ll~G~~G~GKT~l~~~l~ 59 (226)
T 2chg_A 28 RLKGYVERKNIPHLLFSGPPGTGKTATAIALA 59 (226)
T ss_dssp HHHHHHHTTCCCCEEEECSTTSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCeEEEECCCCCCHHHHHHHHH
Confidence 44455555544459999999999999998763
No 443
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=83.48 E-value=0.55 Score=50.21 Aligned_cols=27 Identities=19% Similarity=0.084 Sum_probs=22.3
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+..-+.|+|++||||||++|.+.-+..
T Consensus 89 ~g~ivgI~G~sGsGKSTL~~~L~gll~ 115 (312)
T 3aez_A 89 VPFIIGVAGSVAVGKSTTARVLQALLA 115 (312)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCchHHHHHHHHHhhcc
Confidence 345688999999999999998876654
No 444
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=83.46 E-value=0.7 Score=45.77 Aligned_cols=26 Identities=35% Similarity=0.552 Sum_probs=21.5
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
-..|+|.|..||||||+.+.+.--++
T Consensus 5 ~~~I~l~G~~GsGKsT~a~~La~~l~ 30 (217)
T 3be4_A 5 KHNLILIGAPGSGKGTQCEFIKKEYG 30 (217)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35799999999999999998865443
No 445
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=83.28 E-value=0.64 Score=46.43 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.7
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.|+|.|..||||||+.+.+.-.+
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~l 24 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKY 24 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999886444
No 446
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=83.26 E-value=0.55 Score=48.44 Aligned_cols=20 Identities=30% Similarity=0.574 Sum_probs=18.5
Q ss_pred eeEEEeeccCCChhhHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQm 448 (844)
.||+|+|..++||||+|.++
T Consensus 2 ~kI~lvG~~n~GKSTL~n~L 21 (256)
T 3iby_A 2 THALLIGNPNCGKTTLFNAL 21 (256)
T ss_dssp CEEEEEESTTSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHH
Confidence 38999999999999999987
No 447
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=83.25 E-value=0.53 Score=52.61 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=20.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.-.++|+|+|.+|+||||+++.+-
T Consensus 29 ~vsf~I~lvG~sGaGKSTLln~L~ 52 (418)
T 2qag_C 29 GFEFTLMVVGESGLGKSTLINSLF 52 (418)
T ss_dssp CCCEEEEEECCTTSSHHHHHHHHT
T ss_pred CCCEEEEEECCCCCcHHHHHHHHh
Confidence 335789999999999999998763
No 448
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=83.23 E-value=0.84 Score=49.02 Aligned_cols=21 Identities=24% Similarity=0.494 Sum_probs=19.2
Q ss_pred eeeEEEeeccCCChhhHHHHH
Q 042025 428 VQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQm 448 (844)
..+|+++|..++||||++..+
T Consensus 31 ~~~I~vvG~~~~GKSSLln~L 51 (353)
T 2x2e_A 31 LPQIAVVGGQSAGKSSVLENF 51 (353)
T ss_dssp CCEEEEECBTTSSHHHHHHTT
T ss_pred CCeEEEECCCCCCHHHHHHHH
Confidence 569999999999999999875
No 449
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=83.19 E-value=0.52 Score=50.56 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=21.3
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHh
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.--.+.|+|++||||||++|-+-=++
T Consensus 125 ~Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 125 KKNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp TCSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHhhhc
Confidence 33478999999999999999875555
No 450
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=83.01 E-value=0.62 Score=46.97 Aligned_cols=23 Identities=30% Similarity=0.371 Sum_probs=19.0
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-+.|+|++|||||||++.+.-.+
T Consensus 21 ~ivl~GPSGaGKsTL~~~L~~~~ 43 (197)
T 3ney_A 21 TLVLIGASGVGRSHIKNALLSQN 43 (197)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEEECcCCCCHHHHHHHHHhhC
Confidence 57899999999999999875433
No 451
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=82.97 E-value=0.81 Score=51.46 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=33.0
Q ss_pred Cchhhhhh-cceeeEEEeeccCCChhhHHHHHHHHhc-CCCCHHHHHHH
Q 042025 418 TVPNYLEQ-KKVQKLLLLGLQGAGTSTIFKQAKFLYG-NKFTAEELQDI 464 (844)
Q Consensus 418 ~Id~~Le~-k~~iKLLLLGsgeSGKSTI~KQmKiLy~-~gFS~eEr~~~ 464 (844)
.+..+|++ +..+||+++|..++|||||+.++ ++. ..++......+
T Consensus 22 ~i~~~l~~~k~~~ki~iiG~~~~GKSTLi~~L--l~~~~~i~~~~~~~~ 68 (483)
T 3p26_A 22 DISAFVKSALPHLSFVVLGHVDAGKSTLMGRL--LYDLNIVNQSQLRKL 68 (483)
T ss_dssp CHHHHHHHSCCEEEEEEESCGGGTHHHHHHHH--HHHTTSSCHHHHHHH
T ss_pred cHHHHHhcCCCceEEEEECCCCCCHHHHHHHH--HHhcCCccHHHHHHH
Confidence 46666665 56799999999999999999975 444 34666554433
No 452
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=82.92 E-value=0.65 Score=44.06 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=18.5
Q ss_pred EEEeeccCCChhhHHHHHHHH
Q 042025 431 LLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmKiL 451 (844)
.+++|+.|||||||++-+.++
T Consensus 26 ~~I~G~NGsGKStil~Ai~~~ 46 (149)
T 1f2t_A 26 NLIIGQNGSGKSSLLDAILVG 46 (149)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 578999999999999998853
No 453
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=82.89 E-value=0.77 Score=48.50 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=22.7
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
++...+.|+|..||||||++|.+.-++.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 3345688999999999999998876554
No 454
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=82.80 E-value=0.59 Score=43.48 Aligned_cols=28 Identities=25% Similarity=0.438 Sum_probs=21.8
Q ss_pred hhhhcceeeEEEeeccCCChhhHHHHHH
Q 042025 422 YLEQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 422 ~Le~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
.+......-+||.|..|+||||+++++-
T Consensus 37 ~l~~~~~~~vll~G~~G~GKT~la~~~~ 64 (187)
T 2p65_A 37 ILSRRTKNNPILLGDPGVGKTAIVEGLA 64 (187)
T ss_dssp HHTSSSSCEEEEESCGGGCHHHHHHHHH
T ss_pred HHhCCCCCceEEECCCCCCHHHHHHHHH
Confidence 3334445678999999999999998774
No 455
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=82.74 E-value=0.66 Score=47.90 Aligned_cols=23 Identities=17% Similarity=0.320 Sum_probs=20.5
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
+..+||+++|..++|||||+.++
T Consensus 153 ~~~~~i~i~G~~~~GKssli~~~ 175 (332)
T 2wkq_A 153 KELIKCVVVGDGAVGKTCLLISY 175 (332)
T ss_dssp TTCEEEEEEESTTSSHHHHHHHH
T ss_pred cceeEEEEECCCCCChHHHHHHH
Confidence 55799999999999999999765
No 456
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=82.67 E-value=0.81 Score=45.05 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=20.8
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
....-|+|.|..||||||+.|.+.-.
T Consensus 23 ~~~~~i~~~G~~GsGKsT~~~~l~~~ 48 (211)
T 1m7g_A 23 QRGLTIWLTGLSASGKSTLAVELEHQ 48 (211)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 34456889999999999999987533
No 457
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=82.67 E-value=0.62 Score=49.28 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=25.9
Q ss_pred chhhhhhcceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 419 VPNYLEQKKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 419 Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
|++.++.-...-+.|+|++|+||||+++.+- +..
T Consensus 156 i~~L~~~l~G~i~~l~G~sG~GKSTLln~l~-~~~ 189 (302)
T 2yv5_A 156 IDELVDYLEGFICILAGPSGVGKSSILSRLT-GEE 189 (302)
T ss_dssp HHHHHHHTTTCEEEEECSTTSSHHHHHHHHH-SCC
T ss_pred HHHHHhhccCcEEEEECCCCCCHHHHHHHHH-Hhh
Confidence 5555555445567899999999999999988 553
No 458
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=82.45 E-value=0.72 Score=45.37 Aligned_cols=22 Identities=27% Similarity=0.200 Sum_probs=19.6
Q ss_pred eeEEEeeccCCChhhHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.-|.|.|..||||||+.|.+.-
T Consensus 5 ~~I~i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 5 YIVALTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp EEEEEECCTTSCHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 5688999999999999998875
No 459
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=82.41 E-value=0.57 Score=51.46 Aligned_cols=22 Identities=23% Similarity=0.504 Sum_probs=18.4
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
-+.|+|++||||||++|-+-=+
T Consensus 32 ~~~llGpsGsGKSTLLr~iaGl 53 (359)
T 3fvq_A 32 ILFIIGASGCGKTTLLRCLAGF 53 (359)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCchHHHHHHHHhcC
Confidence 5789999999999999876533
No 460
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=82.38 E-value=0.57 Score=47.21 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=19.0
Q ss_pred EEEeeccCCChhhHHHHHHHHh
Q 042025 431 LLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmKiLy 452 (844)
+||+|++|+||||++|.+--..
T Consensus 52 ~ll~G~~G~GKTtl~~~i~~~~ 73 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLARAVAGEA 73 (254)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 8999999999999999775443
No 461
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=82.16 E-value=0.59 Score=52.41 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=28.7
Q ss_pred CchhhhhhcceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 418 TVPNYLEQKKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 418 ~Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.||..|.-.+-.++.|+|.+||||||++|.+==+..
T Consensus 147 vld~vl~i~~Gq~~~IvG~sGsGKSTLl~~Iag~~~ 182 (438)
T 2dpy_A 147 AINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR 182 (438)
T ss_dssp HHHHHSCCBTTCEEEEEECTTSSHHHHHHHHHHHSC
T ss_pred EEeeeEEecCCCEEEEECCCCCCHHHHHHHHhcccC
Confidence 466665657778999999999999999998755443
No 462
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=82.11 E-value=0.6 Score=50.72 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=21.9
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
.--.++|+|+.||||||++|-+--++.
T Consensus 174 ~G~~i~ivG~sGsGKSTll~~l~~~~~ 200 (361)
T 2gza_A 174 LERVIVVAGETGSGKTTLMKALMQEIP 200 (361)
T ss_dssp TTCCEEEEESSSSCHHHHHHHHHTTSC
T ss_pred cCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 345799999999999999998765543
No 463
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=82.08 E-value=0.56 Score=51.17 Aligned_cols=19 Identities=32% Similarity=0.487 Sum_probs=17.8
Q ss_pred eEEEeeccCCChhhHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQm 448 (844)
-++++|+.||||||+++-+
T Consensus 125 ~i~I~GptGSGKTTlL~~l 143 (356)
T 3jvv_A 125 LVLVTGPTGSGKSTTLAAM 143 (356)
T ss_dssp EEEEECSTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 7999999999999999976
No 464
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=82.05 E-value=0.57 Score=51.31 Aligned_cols=21 Identities=33% Similarity=0.548 Sum_probs=18.0
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
--+.|+|++||||||++|-+-
T Consensus 42 e~~~llGpnGsGKSTLLr~ia 62 (355)
T 1z47_A 42 EMVGLLGPSGSGKTTILRLIA 62 (355)
T ss_dssp CEEEEECSTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCcHHHHHHHHh
Confidence 357899999999999999764
No 465
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=82.05 E-value=0.76 Score=51.32 Aligned_cols=23 Identities=39% Similarity=0.677 Sum_probs=21.0
Q ss_pred cceeeEEEeeccCCChhhHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.+||+|+|.+++|||||+.++
T Consensus 320 ~~~~ki~lvG~~nvGKSsLl~~l 342 (497)
T 3lvq_E 320 NKEMRILMLGLDAAGKTTILYKL 342 (497)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHH
T ss_pred ccceeEEEEcCCCCCHHHHHHHH
Confidence 56799999999999999999886
No 466
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=82.01 E-value=0.63 Score=47.76 Aligned_cols=22 Identities=36% Similarity=0.469 Sum_probs=19.2
Q ss_pred eeEEEeeccCCChhhHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.-|+|.|.+||||||+.+++.-
T Consensus 5 ~lIvl~G~pGSGKSTla~~La~ 26 (260)
T 3a4m_A 5 MLIILTGLPGVGKSTFSKNLAK 26 (260)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHH
Confidence 4588999999999999998764
No 467
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=81.94 E-value=0.58 Score=48.74 Aligned_cols=19 Identities=32% Similarity=0.525 Sum_probs=17.5
Q ss_pred EEEeeccCCChhhHHHHHH
Q 042025 431 LLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmK 449 (844)
+||+|++|+||||++|.+-
T Consensus 47 vlL~Gp~GtGKTtLakala 65 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAKAVA 65 (274)
T ss_dssp EEEESSTTSCHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHH
Confidence 9999999999999999763
No 468
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=81.82 E-value=0.6 Score=53.02 Aligned_cols=20 Identities=25% Similarity=0.336 Sum_probs=17.9
Q ss_pred eeEEEeeccCCChhhHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQm 448 (844)
--++|+|++||||||++||+
T Consensus 40 e~~~l~G~nGsGKSTL~~~~ 59 (525)
T 1tf7_A 40 RSTLVSGTSGTGKTLFSIQF 59 (525)
T ss_dssp SEEEEEESTTSSHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHH
Confidence 35889999999999999993
No 469
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=81.68 E-value=0.79 Score=44.60 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=23.6
Q ss_pred chhhhhhcceeeEEEeeccCCChhhHHHHHH
Q 042025 419 VPNYLEQKKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 419 Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+.+.+......-+||.|+.|+||||+++++-
T Consensus 43 l~~~~~~~~~~~~ll~G~~G~GKT~la~~l~ 73 (242)
T 3bos_A 43 LKSAASGDGVQAIYLWGPVKSGRTHLIHAAC 73 (242)
T ss_dssp HHHHHHTCSCSEEEEECSTTSSHHHHHHHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCCHHHHHHHHH
Confidence 3344444456789999999999999999864
No 470
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=81.68 E-value=0.46 Score=50.93 Aligned_cols=28 Identities=39% Similarity=0.481 Sum_probs=22.2
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+.--.+.|+|++||||||++|-+-=+|.
T Consensus 78 ~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 105 (306)
T 3nh6_A 78 MPGQTLALVGPSGAGKSTILRLLFRFYD 105 (306)
T ss_dssp CTTCEEEEESSSCHHHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCchHHHHHHHHHcCCC
Confidence 3445789999999999999987755553
No 471
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=81.62 E-value=0.6 Score=51.16 Aligned_cols=23 Identities=30% Similarity=0.431 Sum_probs=18.9
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-+.|+|++||||||++|-+-=+.
T Consensus 31 ~~~llGpnGsGKSTLLr~iaGl~ 53 (359)
T 2yyz_A 31 FVALLGPSGCGKTTTLLMLAGIY 53 (359)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSS
T ss_pred EEEEEcCCCchHHHHHHHHHCCC
Confidence 57899999999999999765443
No 472
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=81.52 E-value=0.63 Score=48.02 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=18.6
Q ss_pred eEEEeeccCCChhhHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKi 450 (844)
-|+|.|.+||||||+.|.+.-
T Consensus 4 ~I~l~G~~GsGKST~a~~L~~ 24 (301)
T 1ltq_A 4 IILTIGCPGSGKSTWAREFIA 24 (301)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 478999999999999998764
No 473
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=81.41 E-value=0.7 Score=48.71 Aligned_cols=32 Identities=22% Similarity=0.295 Sum_probs=23.8
Q ss_pred chhhhhhcceeeEEEeeccCCChhhHHHHHHH
Q 042025 419 VPNYLEQKKVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 419 Id~~Le~k~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
|++.++......+.|+|++||||||+++.+-=
T Consensus 160 v~~lf~~l~geiv~l~G~sG~GKSTll~~l~g 191 (301)
T 1u0l_A 160 IEELKEYLKGKISTMAGLSGVGKSSLLNAINP 191 (301)
T ss_dssp HHHHHHHHSSSEEEEECSTTSSHHHHHHHHST
T ss_pred HHHHHHHhcCCeEEEECCCCCcHHHHHHHhcc
Confidence 45555444445678999999999999998743
No 474
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=81.33 E-value=0.58 Score=50.29 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=19.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-.++|+|+.||||||++|-+==++
T Consensus 172 ~~v~i~G~~GsGKTTll~~l~g~~ 195 (330)
T 2pt7_A 172 KNVIVCGGTGSGKTTYIKSIMEFI 195 (330)
T ss_dssp CCEEEEESTTSCHHHHHHHGGGGS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 378999999999999998764443
No 475
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=81.26 E-value=0.65 Score=52.22 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=20.7
Q ss_pred hhhcceeeEEEeeccCCChhhHHHHH
Q 042025 423 LEQKKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 423 Le~k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
++.....++.|+|.+||||||+++-+
T Consensus 37 i~~Gei~~vaLvG~nGaGKSTLln~L 62 (427)
T 2qag_B 37 VSQGFCFNILCVGETGLGKSTLMDTL 62 (427)
T ss_dssp CC-CCEEEEEEECSTTSSSHHHHHHH
T ss_pred ecCCCeeEEEEECCCCCCHHHHHHHH
Confidence 33445567999999999999999875
No 476
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=81.24 E-value=0.63 Score=51.17 Aligned_cols=22 Identities=32% Similarity=0.505 Sum_probs=18.4
Q ss_pred eEEEeeccCCChhhHHHHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiL 451 (844)
-+.|+|++||||||++|-+-=+
T Consensus 31 ~~~llGpnGsGKSTLLr~iaGl 52 (372)
T 1g29_1 31 FMILLGPSGCGKTTTLRMIAGL 52 (372)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCcHHHHHHHHHHcC
Confidence 5789999999999999976433
No 477
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=81.21 E-value=0.93 Score=46.02 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=22.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
++...|.|.|..||||||+.+.+.-.++
T Consensus 20 ~~~~iI~I~G~~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 20 GEPFLIGVSGGTASGKSSVCAKIVQLLG 47 (252)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHTT
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4557799999999999999998765443
No 478
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=81.15 E-value=0.64 Score=51.01 Aligned_cols=23 Identities=30% Similarity=0.446 Sum_probs=18.8
Q ss_pred eeEEEeeccCCChhhHHHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
--+.|+|++||||||++|-+-=+
T Consensus 30 e~~~llGpnGsGKSTLLr~iaGl 52 (362)
T 2it1_A 30 EFMALLGPSGSGKSTLLYTIAGI 52 (362)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCchHHHHHHHHhcC
Confidence 35789999999999999976433
No 479
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=81.07 E-value=0.65 Score=50.72 Aligned_cols=24 Identities=29% Similarity=0.353 Sum_probs=19.8
Q ss_pred ceeeEEEeeccCCChhhHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
.--.++|+|+.||||||+++.+--
T Consensus 135 ~g~~i~ivG~~GsGKTTll~~l~~ 158 (372)
T 2ewv_A 135 KMGLILVTGPTGSGKSTTIASMID 158 (372)
T ss_dssp SSEEEEEECSSSSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHh
Confidence 334699999999999999997743
No 480
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=81.05 E-value=0.65 Score=51.15 Aligned_cols=24 Identities=33% Similarity=0.452 Sum_probs=19.4
Q ss_pred eeEEEeeccCCChhhHHHHHHHHh
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy 452 (844)
--+.|+|++||||||++|-+-=+.
T Consensus 38 e~~~llGpnGsGKSTLLr~iaGl~ 61 (372)
T 1v43_A 38 EFLVLLGPSGCGKTTTLRMIAGLE 61 (372)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHHcCC
Confidence 357899999999999999765433
No 481
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=80.98 E-value=0.74 Score=51.51 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
+...+|+|+|..|||||||.+++.
T Consensus 37 ~~~~~IvlvGlpGsGKSTia~~La 60 (469)
T 1bif_A 37 NCPTLIVMVGLPARGKTYISKKLT 60 (469)
T ss_dssp -CCEEEEEECCTTSSHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHHHHH
Confidence 456799999999999999999875
No 482
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=80.96 E-value=1.1 Score=44.65 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=26.8
Q ss_pred hcceeeEEEeeccCCChhhHHHHHHHHhcCC-CCHHH
Q 042025 425 QKKVQKLLLLGLQGAGTSTIFKQAKFLYGNK-FTAEE 460 (844)
Q Consensus 425 ~k~~iKLLLLGsgeSGKSTI~KQmKiLy~~g-FS~eE 460 (844)
+....-|.|.|..||||||+.+.+.-.++-. ++.++
T Consensus 9 ~~~~~iIgltG~~GSGKSTva~~L~~~lg~~vid~D~ 45 (192)
T 2grj_A 9 HHHHMVIGVTGKIGTGKSTVCEILKNKYGAHVVNVDR 45 (192)
T ss_dssp -CCEEEEEEECSTTSSHHHHHHHHHHHHCCEEEEHHH
T ss_pred cccceEEEEECCCCCCHHHHHHHHHHhcCCEEEECcH
Confidence 3556778899999999999999988765533 45443
No 483
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=80.95 E-value=0.66 Score=51.39 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=19.0
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-+.|||++||||||++|-+-=++
T Consensus 31 ~~~llGpsGsGKSTLLr~iaGl~ 53 (381)
T 3rlf_A 31 FVVFVGPSGCGKSTLLRMIAGLE 53 (381)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEEcCCCchHHHHHHHHHcCC
Confidence 57899999999999999765443
No 484
>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}
Probab=80.74 E-value=0.51 Score=53.58 Aligned_cols=24 Identities=29% Similarity=0.322 Sum_probs=21.2
Q ss_pred cceeeEEEeeccCCChhhHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmK 449 (844)
...+||+|+|.+++||||+++++.
T Consensus 39 ~~~~kV~lvG~~~vGKSSLl~~l~ 62 (535)
T 3dpu_A 39 LQEIKVHLIGDGMAGKTSLLKQLI 62 (535)
T ss_dssp CCEEEEEEESSSCSSHHHHHHHHH
T ss_pred ccceEEEEECCCCCCHHHHHHHHh
Confidence 346899999999999999999864
No 485
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=80.67 E-value=0.86 Score=46.46 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.8
Q ss_pred EEEeeccCCChhhHHHHHHHHhc
Q 042025 431 LLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
|+|+|++||||+|+.+.+.--|+
T Consensus 32 I~llGpPGsGKgTqa~~L~~~~g 54 (217)
T 3umf_A 32 IFVLGGPGSGKGTQCEKLVQKFH 54 (217)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 56789999999999888765554
No 486
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=80.55 E-value=8.6 Score=41.26 Aligned_cols=108 Identities=10% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCceEEEEEeCCCCCCCcccceeccCCccEEEEEeeccccccc--ccCCCCCCCcccccchHHHHHHHHHHHHcCCCCCC
Q 042025 644 PLTKYQLIRVNAKGMNEGCKWVEMFEDVRVVVFCVALSDYDQM--WICPESSGSGTLLQNKMIQSKELFEMMIRHPCFKD 721 (844)
Q Consensus 644 ~~~~~~liDVGGQ~rseR~KW~~~FedV~aIIFVVdLSDYDq~--l~~~ED~g~~~~~~NRL~ESl~LFesI~n~p~f~~ 721 (844)
....+.++|..|. +.......+.++.++|++|.+.-|+. . ...+.+.
T Consensus 146 ~~~~~iliDT~Gi----~~~~~~v~~~~d~vl~v~d~~~~~~~~~i------------~~~i~~~--------------- 194 (337)
T 2qm8_A 146 AGFDVILVETVGV----GQSETAVADLTDFFLVLMLPGAGDELQGI------------KKGIFEL--------------- 194 (337)
T ss_dssp TTCCEEEEEECSS----SSCHHHHHTTSSEEEEEECSCC------C------------CTTHHHH---------------
T ss_pred CCCCEEEEECCCC----CcchhhHHhhCCEEEEEEcCCCcccHHHH------------HHHHhcc---------------
Q ss_pred CcEEEEecccchhhhhhhccccccccccCCCCCCcCCCCChhhHHHHHHHHHHHHHhhhccCC------CCcEEEEEEee
Q 042025 722 TPFVLILNKYDLFEEKVNRVHLSTCEWFNDFSPVRTHHNNQSLAHQAYYYVAMKFKDLYASLT------GRKLFVWQARA 795 (844)
Q Consensus 722 tpiILfLNK~DLfeeKI~~spLs~c~~FPDF~g~~~~~n~~sl~e~A~~YI~~KFl~L~~s~~------~Rklyvh~T~A 795 (844)
+.++++||.|+.. ......-...++........ .-++.. +||
T Consensus 195 -~~ivvlNK~Dl~~-----------------------------~~~~s~~~~~~l~~a~~l~~~~~~~~~~~vl~--~Sa 242 (337)
T 2qm8_A 195 -ADMIAVNKADDGD-----------------------------GERRASAAASEYRAALHILTPPSATWTPPVVT--ISG 242 (337)
T ss_dssp -CSEEEEECCSTTC-----------------------------CHHHHHHHHHHHHHHHTTBCCSBTTBCCCEEE--EBT
T ss_pred -ccEEEEEchhccC-----------------------------chhHHHHHHHHHHHHHHhccccccCCCCCEEE--EeC
Q ss_pred cCCCCHHHHHHHHHHHHhh
Q 042025 796 RDRVTVDEAFKYIREVLKW 814 (844)
Q Consensus 796 tDte~I~evF~~V~e~Ik~ 814 (844)
+++.++++.+++|.+.+.+
T Consensus 243 l~g~gi~~L~~~I~~~~~~ 261 (337)
T 2qm8_A 243 LHGKGLDSLWSRIEDHRSK 261 (337)
T ss_dssp TTTBSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
No 487
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=80.52 E-value=0.99 Score=45.19 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=21.5
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
...|+|.|..||||||+.+.+.--++
T Consensus 16 ~~~I~l~G~~GsGKsT~a~~La~~l~ 41 (233)
T 1ak2_A 16 GVRAVLLGPPGAGKGTQAPKLAKNFC 41 (233)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35799999999999999998865444
No 488
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=80.49 E-value=0.69 Score=43.87 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=18.0
Q ss_pred eeEEEeeccCCChhhHHHHHH
Q 042025 429 QKLLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmK 449 (844)
--++|+|+.|+||||+++-+-
T Consensus 37 ~~~~l~G~~G~GKTtL~~~i~ 57 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLLQAWV 57 (149)
T ss_dssp SEEEEESSSTTTTCHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHH
Confidence 358899999999999988764
No 489
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=80.47 E-value=0.99 Score=47.73 Aligned_cols=28 Identities=25% Similarity=0.069 Sum_probs=23.3
Q ss_pred cceeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
++...|.|.|+.||||||+.+.+.-++.
T Consensus 29 ~~~~ii~I~G~sGsGKSTla~~L~~~l~ 56 (290)
T 1odf_A 29 KCPLFIFFSGPQGSGKSFTSIQIYNHLM 56 (290)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHhh
Confidence 4467789999999999999998876664
No 490
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=80.46 E-value=0.58 Score=45.78 Aligned_cols=23 Identities=17% Similarity=0.351 Sum_probs=19.3
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
.+.|+|.+||||||+++.+--+|
T Consensus 4 ~v~IvG~SGsGKSTL~~~L~~~~ 26 (171)
T 2f1r_A 4 ILSIVGTSDSGKTTLITRMMPIL 26 (171)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 57899999999999999875444
No 491
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=80.40 E-value=0.69 Score=51.63 Aligned_cols=19 Identities=32% Similarity=0.496 Sum_probs=17.6
Q ss_pred eEEEeeccCCChhhHHHHH
Q 042025 430 KLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQm 448 (844)
-++++|+.||||||+++.+
T Consensus 169 ii~I~GpnGSGKTTlL~al 187 (418)
T 1p9r_A 169 IILVTGPTGSGKSTTLYAG 187 (418)
T ss_dssp EEEEECSTTSCHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHH
Confidence 5899999999999999986
No 492
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=80.25 E-value=0.72 Score=50.84 Aligned_cols=25 Identities=32% Similarity=0.456 Sum_probs=20.7
Q ss_pred eeEEEeeccCCChhhHHHHHHHHhc
Q 042025 429 QKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 429 iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
--+.|+|++||||||++|-+--+..
T Consensus 55 ei~~IiGpnGaGKSTLlr~i~GL~~ 79 (366)
T 3tui_C 55 QIYGVIGASGAGKSTLIRCVNLLER 79 (366)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEEcCCCchHHHHHHHHhcCCC
Confidence 3578999999999999998776654
No 493
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=80.22 E-value=0.81 Score=45.11 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=21.7
Q ss_pred Cchhhhhh--cceeeEEEeeccCCChhhHHHHH
Q 042025 418 TVPNYLEQ--KKVQKLLLLGLQGAGTSTIFKQA 448 (844)
Q Consensus 418 ~Id~~Le~--k~~iKLLLLGsgeSGKSTI~KQm 448 (844)
.+|+.|.- .+--=++|+|.+||||||++.|+
T Consensus 11 ~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~~~~ 43 (247)
T 2dr3_A 11 GVDEILHGGIPERNVVLLSGGPGTGKTIFSQQF 43 (247)
T ss_dssp THHHHTTTSEETTCEEEEEECTTSSHHHHHHHH
T ss_pred hHHHHcCCCCCCCcEEEEECCCCCCHHHHHHHH
Confidence 45555532 11224789999999999998876
No 494
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=80.07 E-value=0.76 Score=47.20 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=19.4
Q ss_pred EEEeeccCCChhhHHHHHHHHhc
Q 042025 431 LLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
+||+|++|+||||++|.+--...
T Consensus 76 vll~Gp~GtGKTtl~~~i~~~~~ 98 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLARAVAGEAR 98 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCcChHHHHHHHHHHHcC
Confidence 89999999999999997754433
No 495
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=79.86 E-value=0.76 Score=48.89 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=19.9
Q ss_pred ceeeEEEeeccCCChhhHHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKFL 451 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKiL 451 (844)
..--++|+|.+||||||+++.+=-+
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~ 123 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHR 123 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHH
Confidence 3446889999999999999876433
No 496
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=79.70 E-value=0.79 Score=47.58 Aligned_cols=26 Identities=27% Similarity=0.425 Sum_probs=20.9
Q ss_pred eeeEEEeeccCCChhhHHHHHHHHhc
Q 042025 428 VQKLLLLGLQGAGTSTIFKQAKFLYG 453 (844)
Q Consensus 428 ~iKLLLLGsgeSGKSTI~KQmKiLy~ 453 (844)
--.|.|+|..||||||+.|.+--..+
T Consensus 48 g~~i~l~G~~GsGKSTl~~~La~~lg 73 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGKIMARSLG 73 (250)
T ss_dssp TCCEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 34799999999999999998754333
No 497
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=79.68 E-value=0.56 Score=51.16 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.0
Q ss_pred eEEEeeccCCChhhHHHHHHHHh
Q 042025 430 KLLLLGLQGAGTSTIFKQAKFLY 452 (844)
Q Consensus 430 KLLLLGsgeSGKSTI~KQmKiLy 452 (844)
-+.|+|++||||||++|-+-=+.
T Consensus 28 ~~~llGpnGsGKSTLLr~iaGl~ 50 (348)
T 3d31_A 28 YFVILGPTGAGKTLFLELIAGFH 50 (348)
T ss_dssp EEEEECCCTHHHHHHHHHHHTSS
T ss_pred EEEEECCCCccHHHHHHHHHcCC
Confidence 57899999999999999765443
No 498
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=79.54 E-value=1 Score=46.95 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=20.8
Q ss_pred ceeeEEEeeccCCChhhHHHHHHH
Q 042025 427 KVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 427 ~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
+...|.|.|..||||||+.|.+.-
T Consensus 74 ~~~iI~I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 74 GLYVLGLTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Confidence 345799999999999999999884
No 499
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=79.32 E-value=0.9 Score=45.30 Aligned_cols=19 Identities=21% Similarity=0.200 Sum_probs=17.3
Q ss_pred EEEeeccCCChhhHHHHHH
Q 042025 431 LLLLGLQGAGTSTIFKQAK 449 (844)
Q Consensus 431 LLLLGsgeSGKSTI~KQmK 449 (844)
+|++|..+|||||+..|+-
T Consensus 2 ilV~Gg~~SGKS~~A~~la 20 (180)
T 1c9k_A 2 ILVTGGARSGKSRHAEALI 20 (180)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHH
Confidence 7999999999999999863
No 500
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=79.31 E-value=0.82 Score=51.62 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=20.7
Q ss_pred cceeeEEEeeccCCChhhHHHHHHH
Q 042025 426 KKVQKLLLLGLQGAGTSTIFKQAKF 450 (844)
Q Consensus 426 k~~iKLLLLGsgeSGKSTI~KQmKi 450 (844)
+.--.++|+|.+||||||++|-+-=
T Consensus 136 ~~Ge~v~IvGpnGsGKSTLlr~L~G 160 (460)
T 2npi_A 136 FEGPRVVIVGGSQTGKTSLSRTLCS 160 (460)
T ss_dssp SSCCCEEEEESTTSSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhC
Confidence 4456899999999999999987643
Done!