Query 042029
Match_columns 316
No_of_seqs 114 out of 142
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 22:59:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bu3_A ALR0975 protein; phytoc 100.0 1.7E-31 5.7E-36 246.0 4.8 66 1-66 188-253 (254)
2 3b79_A Toxin secretion ATP-bin 31.3 51 0.0017 24.9 4.0 40 5-45 78-117 (129)
3 2k8j_X P7TM2; P7 polypeptide, 30.4 20 0.0007 23.5 1.3 14 254-267 16-29 (29)
4 2j8a_A Histone-lysine N-methyl 29.1 25 0.00086 29.9 2.1 20 46-65 38-57 (136)
5 3k8u_A Putative ABC transporte 27.4 40 0.0014 26.9 2.9 47 5-64 94-140 (156)
6 2lkz_A RNA-binding protein 5; 27.1 41 0.0014 25.3 2.8 47 12-64 2-61 (95)
7 2lh0_A Histone chaperone RTT10 26.8 26 0.0009 27.0 1.6 16 284-299 9-24 (70)
8 1of9_A Pore-forming peptide am 23.4 28 0.00097 25.6 1.2 45 83-127 6-50 (77)
9 1po5_A Cytochrome P450 2B4; ox 23.4 81 0.0028 28.6 4.5 30 256-290 292-321 (476)
10 3e6i_A CYPIIE1, P450-J, cytoch 23.0 83 0.0028 28.1 4.4 39 256-299 291-340 (476)
11 2dgs_A DAZ-associated protein 22.9 64 0.0022 23.2 3.1 43 15-63 7-59 (99)
12 3ncv_A DNA mismatch repair pro 22.3 64 0.0022 28.4 3.5 60 92-155 124-192 (220)
13 1uaw_A Mouse-musashi-1; RNP-ty 22.1 60 0.0021 22.0 2.7 18 48-65 34-51 (77)
14 2mss_A Protein (musashi1); RNA 21.4 77 0.0026 21.5 3.1 17 48-64 33-49 (75)
15 3md1_A Nuclear and cytoplasmic 21.0 81 0.0028 21.6 3.2 16 48-63 35-50 (83)
16 3zua_A CLD, alpha-hemolysin tr 21.0 94 0.0032 24.3 3.9 37 6-45 87-123 (142)
17 3pm0_A Cypib1, cytochrome P450 21.0 96 0.0033 27.9 4.4 29 256-289 303-331 (507)
18 1l9l_A Granulysin; saposin fol 20.9 20 0.0007 26.8 -0.0 45 83-127 5-49 (74)
19 2fdv_A Cytochrome P450 2A6; CY 20.9 97 0.0033 28.0 4.5 30 256-290 292-321 (476)
No 1
>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B
Probab=99.97 E-value=1.7e-31 Score=245.98 Aligned_cols=66 Identities=42% Similarity=0.873 Sum_probs=62.5
Q ss_pred CCCCCccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEecCCC
Q 042029 1 MQNGNGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRSHK 66 (316)
Q Consensus 1 gQtG~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is~~~~ 66 (316)
||+|+||||||||||+++|+||||||||||||||||++++||+||+++|++||++|||++|++.++
T Consensus 188 ~q~G~GHfSPIggY~~~~D~vLIlDVar~kYpp~WV~~~~L~~Am~~~D~~s~~~RG~~li~~~~~ 253 (254)
T 2bu3_A 188 GQERGGHISPLAAYNEQTDRFLIMDVSRYKYPPVWVKTTDLWKAMNTVDSVSQKTRGFVFVSKTQD 253 (254)
T ss_dssp TCSSSEEEEEEEEEETTTTEEEECCSCTTTCCCEEEEHHHHHHHHSSEETTTTEECEEEEEEC---
T ss_pred CCCCCCceeceeeEcCCCCeEEEEecCccCCCCEeeeHHHHHHHHhcccccCCCcceEEEEecccC
Confidence 799999999999999999999999999999999999999999999999999999999999998764
No 2
>3b79_A Toxin secretion ATP-binding protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.37A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.25 E-value=51 Score=24.93 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=31.5
Q ss_pred CccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhh
Q 042029 5 NGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAM 45 (316)
Q Consensus 5 ~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM 45 (316)
.|||-=|-+++.+...++|.|.+. ..-+.+++.+++-+.-
T Consensus 78 ~~h~vVl~~~~~~~~~~~i~dp~~-~~g~~~~~~~ef~~~w 117 (129)
T 3b79_A 78 GGDSCVLNSINMETREAEVTTLES-GMVPISIPLEDLLEQY 117 (129)
T ss_dssp GGEEEEEEEEETTTTEEEEECTTT-TTSCEEEEHHHHHHHE
T ss_pred CCCEEEEEEEcCCCceEEEEccCC-CCCcEEeeHHHHHhhC
Confidence 579999999997666899999872 2357999999886644
No 3
>2k8j_X P7TM2; P7 polypeptide, HCV, ION chaneling, transmembrane, viral Pro; NMR {Synthetic}
Probab=30.42 E-value=20 Score=23.53 Aligned_cols=14 Identities=57% Similarity=0.800 Sum_probs=11.3
Q ss_pred HHHHHHhcCcchhc
Q 042029 254 LTLLVLALRQRTWA 267 (316)
Q Consensus 254 lTvLLLaLp~~TWs 267 (316)
|..|+||||++-|.
T Consensus 16 llLllLaLP~rAyA 29 (29)
T 2k8j_X 16 LLLLLLALPPRAYA 29 (29)
T ss_dssp HHHHHHTCCCTTCC
T ss_pred HHHHHHhCchhccC
Confidence 56789999998774
No 4
>2j8a_A Histone-lysine N-methyltransferase, H3 lysine-4 specific; histone methyltransferase, RRM fold, telomere, nuclear protein; 3.0A {Saccharomyces cerevisiae}
Probab=29.10 E-value=25 Score=29.91 Aligned_cols=20 Identities=10% Similarity=0.009 Sum_probs=16.7
Q ss_pred ccccCcCCCceeEEEEecCC
Q 042029 46 DTIDESTGQHRGFMVISRSH 65 (316)
Q Consensus 46 ~~~D~~tg~~RG~~~is~~~ 65 (316)
...|+.||++|||-.|.-.+
T Consensus 38 li~Dp~Tg~slGfgfVef~d 57 (136)
T 2j8a_A 38 AFNDPNSALPLHVYLIKYAS 57 (136)
T ss_dssp EEECTTTCCEEEEEEEECC-
T ss_pred EEecCCCCceeeEEEEEECC
Confidence 45799999999999999664
No 5
>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}
Probab=27.36 E-value=40 Score=26.85 Aligned_cols=47 Identities=15% Similarity=0.134 Sum_probs=35.0
Q ss_pred CccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhhccccCcCCCceeEEEEecC
Q 042029 5 NGHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAMDTIDESTGQHRGFMVISRS 64 (316)
Q Consensus 5 ~GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~~D~~tg~~RG~~~is~~ 64 (316)
.|||--|.+++ .+.++|.|.+.- -.+.+++.+++-+.- .|++++-++
T Consensus 94 ~~hfvVl~~~~--~~~v~I~DP~~g-~~~~~ls~~ef~~~w----------~G~~l~~~p 140 (156)
T 3k8u_A 94 LQHYYVVYGSQ--NNQLIIGDPDPS-VKVTRMSKERFQSEW----------TGLAIFLAP 140 (156)
T ss_dssp EEEEEEEEEEE--TTEEEEEECSTT-TEEEEEEHHHHHHHE----------EEEEEEEEE
T ss_pred CcEEEEEEEEc--CCEEEEEcCCCC-cceEEEcHHHHHhhC----------ceEEEEEEc
Confidence 47999998887 578999999752 128899999876654 377766544
No 6
>2lkz_A RNA-binding protein 5; RRM; NMR {Homo sapiens}
Probab=27.12 E-value=41 Score=25.27 Aligned_cols=47 Identities=23% Similarity=0.405 Sum_probs=29.1
Q ss_pred ccccCCC-CeEEEEecCCCCCCceecchHHHHHhhcc------------ccCcCCCceeEEEEecC
Q 042029 12 GGYHAGR-DMVLILDVARFKYPPHWMPLTLLWEAMDT------------IDESTGQHRGFMVISRS 64 (316)
Q Consensus 12 ggYh~~~-D~vLILDVARfKYpp~WV~~~~L~~AM~~------------~D~~tg~~RG~~~is~~ 64 (316)
|+++.+. +.++|=.. |+.+.-++|.+.+.. .|+.||++|||--|.=.
T Consensus 2 g~~~~~~m~tlfV~nL------~~~~tee~L~~~F~~~G~i~v~~v~i~~d~~tg~srG~aFV~f~ 61 (95)
T 2lkz_A 2 GHHHHHHMDTIILRNI------APHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLS 61 (95)
T ss_dssp CCCSSCCCCEEEEESC------CTTCCHHHHHHHSTTTCCCCGGGEECCCCSSSSSCSSEEEEECS
T ss_pred CcccCCccCEEEEeCC------CCcCCHHHHHHHHHhhCCccEEEEEEEecCCCCCCceEeEEEEC
Confidence 4455444 44444333 445666777666542 47889999999877643
No 7
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=26.84 E-value=26 Score=26.97 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.7
Q ss_pred cCCCChhHHHHHHHHH
Q 042029 284 IDNLPTPLQLEVLHLR 299 (316)
Q Consensus 284 t~~LP~~Lq~EVlhLr 299 (316)
.++||..||+.|+++=
T Consensus 9 L~~LP~~Lq~kV~aIV 24 (70)
T 2lh0_A 9 LDELPESLSRKIGTVV 24 (70)
T ss_dssp GGGSCHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHH
Confidence 5789999999998864
No 8
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=23.44 E-value=28 Score=25.61 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=36.0
Q ss_pred HHHHHHHhcCccccccCCCCCHHHHHHHHHhcCCcchhhhheeee
Q 042029 83 KVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVA 127 (316)
Q Consensus 83 ~~ak~l~~~vp~ll~~~~~~~v~~vls~v~~slP~~~~~fikwv~ 127 (316)
.+.++++..+-.++.....+.|++.|+.+.+.||..+....+.++
T Consensus 6 ~~C~~vv~~ve~~l~~nt~~~I~~~l~~~C~~lp~~~~~~C~~~V 50 (77)
T 1of9_A 6 NLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATLCTKVL 50 (77)
T ss_dssp HHHHHHHHHHHHHCSSSCSHHHHHHHHHHHTTCSSTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 466777777778886666777888899999999998888777664
No 9
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=23.38 E-value=81 Score=28.57 Aligned_cols=30 Identities=10% Similarity=0.169 Sum_probs=21.5
Q ss_pred HHHHhcCcchhcCCCchhHHHHHHhhhccCCCChh
Q 042029 256 LLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTP 290 (316)
Q Consensus 256 vLLLaLp~~TWs~Ikde~L~~E~~~LvSt~~LP~~ 290 (316)
+..||-+|..+ ++|++||.+++..+..|+.
T Consensus 292 l~~L~~~P~~~-----~~l~~Ei~~~~~~~~~~~~ 321 (476)
T 1po5_A 292 FLLMLKYPHVT-----ERVQKEIEQVIGSHRPPAL 321 (476)
T ss_dssp HHHHHHCHHHH-----HHHHHHHHHHTCSSSCCCG
T ss_pred HHHHHhCHHHH-----HHHHHHHHHHhCCCCCCCh
Confidence 44567777765 6899999998776555554
No 10
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=23.03 E-value=83 Score=28.08 Aligned_cols=39 Identities=18% Similarity=0.280 Sum_probs=26.9
Q ss_pred HHHHhcCcchhcCCCchhHHHHHHhhhccCCCCh-----------hHHHHHHHHH
Q 042029 256 LLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPT-----------PLQLEVLHLR 299 (316)
Q Consensus 256 vLLLaLp~~TWs~Ikde~L~~E~~~LvSt~~LP~-----------~Lq~EVlhLr 299 (316)
+..|+-+|.-+ ++|++||.+++..+..|+ -.-.|+++|.
T Consensus 291 l~~L~~~P~~~-----~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~ 340 (476)
T 3e6i_A 291 LLILMKYPEIE-----EKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFI 340 (476)
T ss_dssp HHHHHHCHHHH-----HHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHH-----HHHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhc
Confidence 44566677654 589999999987666664 3456776665
No 11
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.92 E-value=64 Score=23.18 Aligned_cols=43 Identities=23% Similarity=0.292 Sum_probs=26.6
Q ss_pred cCCCCeEEEEecCCCCCCceecchHHHHHhhcc----------ccCcCCCceeEEEEec
Q 042029 15 HAGRDMVLILDVARFKYPPHWMPLTLLWEAMDT----------IDESTGQHRGFMVISR 63 (316)
Q Consensus 15 h~~~D~vLILDVARfKYpp~WV~~~~L~~AM~~----------~D~~tg~~RG~~~is~ 63 (316)
......+.|=.+ |.++.-++|.+.+.. .|+.||++|||..|.-
T Consensus 7 ~~~~~~l~V~nl------p~~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f 59 (99)
T 2dgs_A 7 GSKSNKIFVGGI------PHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 59 (99)
T ss_dssp CSSCCEEEEESC------CSSCCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEE
T ss_pred CCCCCEEEEeCC------CCCCCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEE
Confidence 344455555433 556777777765544 3667888888877654
No 12
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=22.26 E-value=64 Score=28.38 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=40.3
Q ss_pred CccccccCCCCCHHHHHHHHHh---------cCCcchhhhheeeeEEeeccccCCCCCHHHHHHHHHHHhcch
Q 042029 92 VPPRMKLKDIKGVENILSVLFK---------SAPVDLKDFIKCVAEFWRQEDAGVFSSKIEKEEVLKLVEETE 155 (316)
Q Consensus 92 vp~ll~~~~~~~v~~vls~v~~---------slP~~~~~fikwv~Evrr~e~~~~~ls~eek~~vlqqv~~T~ 155 (316)
+|..+... ++++++..++. ..|....+++++.| =|..--.|..|+.+|-+.+++++..++
T Consensus 124 vP~~l~~~---d~~~ll~~ll~~l~~~~~~~~~~~~~~~~~as~A-Cr~AIk~g~~Ls~~Em~~Ll~~L~~~~ 192 (220)
T 3ncv_A 124 APVMLGKS---DVVSLARDVLGELAQVGSSQTIASHENRILATMS-CHGSIRAGRRLTLPEMNALLRDMENTP 192 (220)
T ss_dssp EETTSCCS---CHHHHHHHHHHHHTTCC-----CTTHHHHHHHHT-TCSSSCSSCCCCHHHHHHHHHHHHTST
T ss_pred cCcccCCC---CHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH-HHhhhhcCCCCCHHHHHHHHHHHHhCC
Confidence 78877654 45555544443 24556677788876 456666778999999888888877664
No 13
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.07 E-value=60 Score=21.97 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=12.9
Q ss_pred ccCcCCCceeEEEEecCC
Q 042029 48 IDESTGQHRGFMVISRSH 65 (316)
Q Consensus 48 ~D~~tg~~RG~~~is~~~ 65 (316)
.|+.||++|||..|.-.+
T Consensus 34 ~~~~~~~~~g~afV~f~~ 51 (77)
T 1uaw_A 34 RDPLTKRSRGFGFVTFMD 51 (77)
T ss_dssp CCCCSSSCSSEEEECCCC
T ss_pred cCCCCCCcCceEEEEEcC
Confidence 466788889888776443
No 14
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=21.45 E-value=77 Score=21.47 Aligned_cols=17 Identities=35% Similarity=0.692 Sum_probs=12.7
Q ss_pred ccCcCCCceeEEEEecC
Q 042029 48 IDESTGQHRGFMVISRS 64 (316)
Q Consensus 48 ~D~~tg~~RG~~~is~~ 64 (316)
.|+.+|++|||..|.=.
T Consensus 33 ~~~~~~~~~g~afV~f~ 49 (75)
T 2mss_A 33 FDKTTNRHRGFGFVTFE 49 (75)
T ss_dssp BCSSSTTSCBEEEEECS
T ss_pred ecCCCCCcCcEEEEEEC
Confidence 46678999998877643
No 15
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=21.01 E-value=81 Score=21.63 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=11.5
Q ss_pred ccCcCCCceeEEEEec
Q 042029 48 IDESTGQHRGFMVISR 63 (316)
Q Consensus 48 ~D~~tg~~RG~~~is~ 63 (316)
.|+.+|++|||..|.-
T Consensus 35 ~~~~~~~~~g~afV~f 50 (83)
T 3md1_A 35 WDMQTGSSRGYGFVSF 50 (83)
T ss_dssp ECTTTCCEEEEEEEEE
T ss_pred EcCCCCCccceEEEEE
Confidence 3667888888877663
No 16
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=21.00 E-value=94 Score=24.26 Aligned_cols=37 Identities=14% Similarity=0.194 Sum_probs=27.8
Q ss_pred ccccccccccCCCCeEEEEecCCCCCCceecchHHHHHhh
Q 042029 6 GHYSPIGGYHAGRDMVLILDVARFKYPPHWMPLTLLWEAM 45 (316)
Q Consensus 6 GHFSPIggYh~~~D~vLILDVARfKYpp~WV~~~~L~~AM 45 (316)
.|| =|.+++.+.+.++|.|.+.-+ +.+++.+++-+.-
T Consensus 87 ~~~-Vv~~~~~~~~~~~I~dP~~g~--~~~~s~~ef~~~w 123 (142)
T 3zua_A 87 RHF-ILTKVSKEANRYLIFDLEQRN--PRVLEQSEFEALY 123 (142)
T ss_dssp CCE-EEEEEETTTTEEEEEETTTTE--EEEEEHHHHHHHC
T ss_pred CEE-EEEEEeCCCCEEEEEcCCCCC--cEEecHHHHHhhC
Confidence 455 455577777899999997643 8999999887654
No 17
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=20.97 E-value=96 Score=27.91 Aligned_cols=29 Identities=21% Similarity=0.358 Sum_probs=20.8
Q ss_pred HHHHhcCcchhcCCCchhHHHHHHhhhccCCCCh
Q 042029 256 LLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPT 289 (316)
Q Consensus 256 vLLLaLp~~TWs~Ikde~L~~E~~~LvSt~~LP~ 289 (316)
+..||.+|.-+ ++|++||.+++..+..|+
T Consensus 303 l~~L~~~P~~~-----~kl~~Ei~~~~~~~~~~~ 331 (507)
T 3pm0_A 303 LLLFTRYPDVQ-----TRVQAELDQVVGRDRLPC 331 (507)
T ss_dssp HHHHHHCHHHH-----HHHHHHHHHHTCTTSCCC
T ss_pred HHHHHhCHHHH-----HHHHHHHHHhcCCCCCCC
Confidence 34566677654 689999999887666664
No 18
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=20.92 E-value=20 Score=26.75 Aligned_cols=45 Identities=7% Similarity=0.159 Sum_probs=36.9
Q ss_pred HHHHHHHhcCccccccCCCCCHHHHHHHHHhcCCcchhhhheeee
Q 042029 83 KVAKYLIEDVPPRMKLKDIKGVENILSVLFKSAPVDLKDFIKCVA 127 (316)
Q Consensus 83 ~~ak~l~~~vp~ll~~~~~~~v~~vls~v~~slP~~~~~fikwv~ 127 (316)
.+..|+++.+-.+++...-+.|.+.|+.+++.||+.+++..+.++
T Consensus 5 ~~C~~~v~~le~~l~n~Te~~I~~~L~~vC~~l~~~~~~~C~~~V 49 (74)
T 1l9l_A 5 RTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFM 49 (74)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHGGGSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccCHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 456778888878775567889999999999999998998887765
No 19
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=20.90 E-value=97 Score=28.03 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=21.3
Q ss_pred HHHHhcCcchhcCCCchhHHHHHHhhhccCCCChh
Q 042029 256 LLVLALRQRTWAGIKQENLLAQFNHLTSIDNLPTP 290 (316)
Q Consensus 256 vLLLaLp~~TWs~Ikde~L~~E~~~LvSt~~LP~~ 290 (316)
+..||.+|..+ ++|++|+.+.+..+..|+.
T Consensus 292 l~~L~~~P~~~-----~~l~~Ei~~~~~~~~~~~~ 321 (476)
T 2fdv_A 292 FLLLMKHPEVE-----AKVHEEIDRVIGKNRQPKF 321 (476)
T ss_dssp HHHHHHCHHHH-----HHHHHHHHHHTCSSSCCCG
T ss_pred HHHHHhCHHHH-----HHHHHHHHHhhcCCCCCCh
Confidence 44566777655 6899999998876555554
Done!