BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042031
MADHALTVPNDSLSLAEPTLSIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAK
CSKEGCPWRVHVAKCPGVPTFSIRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIRDNP
QYKPKEILQDIRDQHGVAVSYMQAWRGKERSMAALHGTYEEGYRLLPAYCEQIRKTNPGS
IASVFATGQKIVSIGSLFLIVHQYMGVDAEDALFPLAIAIVDVESDENWMWFMSELRKLL
GVNTDNMPRLTILSERQRGIVEAVETHFPSAFHCFCLRYVSENFRDTFKNTKLVNIFWNA
VYALTTVEFEAKISEMVEISQDVIPWFQQFPPQLWAIAYFEGVRYGHFTLGVTELLYNWA
LECHELPVVQMMEYIRHQLTSWFNDRREMGMRWTSILVPSTERQIMEAIADARCYQVLRA
NEIEFEIVSTERTNIVDIRSRVCSCRRWQLYGLPCAHAAAALLSCGQNVHLFAEPCFTVA
SYRETYSQMINAIPDKSRWKEPGEGAEGGVAKLDITIRPPKTRRPPGRPKKKVLRVENFK
RPKRIVQCGRCHLLGHSQKKCTMPI

High Scoring Gene Products

Symbol, full name Information P value
AT1G64260 protein from Arabidopsis thaliana 1.7e-26
AT1G49920 protein from Arabidopsis thaliana 3.6e-18
AT1G64255 protein from Arabidopsis thaliana 1.3e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042031
        (565 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2014230 - symbol:AT1G64260 "AT1G64260" species...   296  1.7e-26   2
TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   147  3.6e-18   3
TAIR|locus:1006230722 - symbol:AT1G64255 species:3702 "Ar...   222  1.3e-17   2


>TAIR|locus:2014230 [details] [associations]
            symbol:AT1G64260 "AT1G64260" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC066689
            InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108 eggNOG:NOG303426
            HOGENOM:HOG000152182 ProtClustDB:CLSN2682695 IPI:IPI00526445
            RefSeq:NP_176608.2 UniGene:At.66093 EnsemblPlants:AT1G64260.1
            GeneID:842731 KEGG:ath:AT1G64260 TAIR:At1g64260 InParanoid:Q9C7V1
            OMA:HDHELGL PhylomeDB:Q9C7V1 Genevestigator:Q9C7V1 Uniprot:Q9C7V1
        Length = 719

 Score = 296 (109.3 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 87/313 (27%), Positives = 148/313 (47%)

Query:   206 GVDAEDALFPLAIAIVDVESDENWMWFMSELRKLLGVNTDNMPRLTILSERQRGIVEAVE 265
             GVDA +  FPLA A+    S ++W WF +++R+ +    D    L ++S   R IV  V 
Sbjct:   399 GVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKD----LCLISSPLRDIVAVVN 454

Query:   266 T-----HFPSAFHCFCLRYVSENFRDTFKNTKLVNIFWNAVYALTTVEFEAKISEMVEIS 320
                     P A H FCL ++   F   F++  L ++   A       EF++ ++++ E +
Sbjct:   455 EPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKN 514

Query:   321 QDVIPWFQQFPPQLWAIAYFEGVRYGHFTLGVTELLYNWALECHELP--VVQMMEYIR-- 376
              +   W  Q P   WA+A+  G+RYG   +   E L+  A+ C   P   V M   +   
Sbjct:   515 PEAWKWLDQIPRHKWALAHDSGLRYGIIEID-REALF--AV-CRGFPYCTVAMTGGVMLM 570

Query:   377 -HQLTSWFNDRREMGMRWTSIL--VPSTER---QIMEAIADARCYQVLRANEIEFEIV-S 429
               +L S F+  + +   ++S+   V  TE    ++ E + D+  Y + +     F++  S
Sbjct:   571 FDELRSSFD--KSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSES 628

Query:   430 TERTN-IVDIRSRVCSCRRWQLYGLPCAHAAAALLSCGQNVHLFAEPCFTVASYRETYSQ 488
             +E+   IV +    C+CR++Q Y  PC HA A       N   + + C+TV  Y +TY+ 
Sbjct:   629 SEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAA 688

Query:   489 MINAIPDKSRWKE 501
               + +PD + W E
Sbjct:   689 TFSPVPDVAAWPE 701

 Score = 77 (32.2 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 25/158 (15%), Positives = 62/158 (39%)

Query:    20 LSIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVP 79
             + +G  F D +  ++ +    I    +  + ++++  +  +C +  C W +  A+     
Sbjct:   185 MHLGLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAARMEEHG 244

Query:    80 TFSIRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPKEILQDIRDQHGVAV 139
                I    G HTC    + +       + A  +E  +R  P     E+ +  +++ G  +
Sbjct:   245 LVEITKYTGPHTCS---HEYPNDFESEFAADEIERVVRIQPTLSIAELKKWWKEKTGYEL 301

Query:   140 SYMQAWRGKERSMAALHGTYEEGYRLLPAYCEQIRKTN 177
                +   GK   +  + G  ++ +R++P        +N
Sbjct:   302 QTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSN 339


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 147 (56.8 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
 Identities = 44/156 (28%), Positives = 72/156 (46%)

Query:   208 DAEDALFPLAIAIVDVESDENWMWFMSELRKLL----GVNTDNMPRLTILSERQRGIVEA 263
             DA +  FPLA A+    S ++W WF++ +R+ +    G+   + P   IL+       + 
Sbjct:   404 DATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAVINEPGSQW 463

Query:   264 VETHFPSAFHCFCLRYVSENFRDTFKNTKLVNIFW--NAVYALTTVEFEAKISEMVEISQ 321
              E   P A+H FCL ++                F    A  +    EF++ + E+ E + 
Sbjct:   464 KE---PWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEIKERNP 520

Query:   322 DVIPWFQQFPPQLWAIAYFEGVRYGHFTLGVTELLY 357
             +   W  QFPP  WA+A+ +G RYG   +  TE L+
Sbjct:   521 EAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALF 555

 Score = 123 (48.4 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
 Identities = 28/90 (31%), Positives = 44/90 (48%)

Query:   415 YQVLRANEIEFEIV--STERTN-IVDIRSRVCSCRRWQLYGLPCAHAAAALLSCGQNVHL 471
             YQV  A + +  ++  S + T+ IV +    C+C  +Q    PC HA A       N   
Sbjct:   628 YQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQ 687

Query:   472 FAEPCFTVASYRETYSQMINAIPDKSRWKE 501
             + + C+TV  Y +TYS   + +P+ S W E
Sbjct:   688 YVDDCYTVERYHKTYSAKFSPVPELSAWPE 717

 Score = 79 (32.9 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
 Identities = 30/172 (17%), Positives = 70/172 (40%)

Query:    13 LSLAEPTLSIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVHV 72
             L L   T+ +G  F D+   ++ +   +I       + ++++  ++ +C +  C W +  
Sbjct:   173 LWLEGDTMRVGLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICA 232

Query:    73 AKCPGVPTFSIRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPKEILQDIR 132
             ++      F I    G H C   ++L+   A    +   +E  +R  P     E+ +   
Sbjct:   233 SRREEDGLFEITECSGPHDCYP-EHLNDFDAEC--IPFQIERVVRVQPTLSTAELDKWWE 289

Query:   133 DQHGVAVSYM--QAWRG-----KERSMAALHGTYEEGYRLLPAYCEQIRKTN 177
              + G A+  +      G     K +++    G +++ +RL+P     +  +N
Sbjct:   290 KKFGFALDQVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSN 341


>TAIR|locus:1006230722 [details] [associations]
            symbol:AT1G64255 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GO:GO:0008270 InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108
            IPI:IPI00538919 RefSeq:NP_974088.1 UniGene:At.66092 PRIDE:F4I6P0
            EnsemblPlants:AT1G64255.1 GeneID:2745850 KEGG:ath:AT1G64255
            OMA:ECHELPI Uniprot:F4I6P0
        Length = 750

 Score = 222 (83.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 75/310 (24%), Positives = 127/310 (40%)

Query:   206 GVDAEDALFPLAIAIVDVESDENWMWFMSELRKLLGVNTDNMPRLTILSERQRGIVEAV- 264
             GVDA +  FPLA A+    S + W WF++ +R+           L ++S     I+  V 
Sbjct:   406 GVDAANKYFPLAFAVTKEVSTDIWRWFLTGIRE----KVTQRKGLCLISSPHPDIIAVVN 461

Query:   265 ----ETHFPSAFHCFCLRYVSENFRDTFKNTKLVNIFWNAVYALTTVEFEAKISEMVEIS 320
                 +   P A+H F L +    F   F +  L      A       EF + ++++ E +
Sbjct:   462 ESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQKDEFVSYMNDIKEKN 521

Query:   321 QDVIPWFQQFPPQLWAIAYFEGVRYGHFTLGVTEL--LYNWALEC--HELP--VVQMMEY 374
              +   W  QFP   WA+A+  G RYG   +    L  + N A E   H +   V+ + + 
Sbjct:   522 PEARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCN-AFEQAGHVVTGSVLLLFDE 580

Query:   375 IRHQLTSWFNDRREM---GMRWTSILVPSTERQIMEAIADARCYQVLRANEIEFEIVSTE 431
             +R +    F+  R     G  +T  ++   E      +  +     L  N  +      +
Sbjct:   581 LRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTYSYIVTPLDNNAFQVATALDK 640

Query:   432 RTNIVDIRSRVCSCRRWQLYGLPCAHAAAALLSCGQNVHLFAEPCFTVASYRETYSQMIN 491
                IV +    C+C  +Q Y  PC HA A       N   + + C+T+   + TY+ + +
Sbjct:   641 GECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFS 700

Query:   492 AIPDKSRWKE 501
              +P+ S W E
Sbjct:   701 HVPEMSAWPE 710

 Score = 73 (30.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 27/166 (16%), Positives = 64/166 (38%)

Query:    12 SLSLAEPTLSIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVH 71
             SL L +  L +G  F D +  ++ +   ++       + ++ +  +I +C +  C W + 
Sbjct:   184 SLWLDDHDLRVGLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLG 243

Query:    72 VAKCPGVPTFSIRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPKEILQDI 131
              A+        I    G HTC  +     +     +    +E  +R  P     E+ +  
Sbjct:   244 AARMKKHGLVEIIKYTGPHTCHPIVP---EDFKSEFETDEIERAVRYMPTQTISELKKWW 300

Query:   132 RDQHGVAVSYMQAWRGKERSMAALHGTYEEGYRLLPAYCEQIRKTN 177
             + + G  +        KE+++  + G +++ +   P     +  +N
Sbjct:   301 KKKIGYELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSN 346


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      565       550   0.00097  119 3  11 22  0.47    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  360 KB (2177 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.64u 0.15s 45.79t   Elapsed:  00:00:02
  Total cpu time:  45.64u 0.15s 45.79t   Elapsed:  00:00:02
  Start:  Mon May 20 18:37:37 2013   End:  Mon May 20 18:37:39 2013

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