Query 042033
Match_columns 490
No_of_seqs 221 out of 1181
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 23:02:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042033.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042033hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k87_A PUTA, proline dehydroge 100.0 1.2E-80 4.1E-85 680.6 29.2 359 59-476 197-570 (669)
2 3e2q_A Proline oxidase, prolin 100.0 3.7E-78 1.3E-82 645.6 26.4 360 59-477 112-486 (551)
3 3haz_A Proline dehydrogenase; 100.0 9.8E-76 3.4E-80 670.4 26.9 358 60-477 110-474 (1001)
4 4h6q_A Proline dehydrogenase; 100.0 3.9E-74 1.3E-78 581.7 27.9 284 112-475 21-307 (312)
5 2ekg_A Proline dehydrogenase/d 100.0 3E-73 1E-77 578.6 30.2 281 111-475 39-322 (327)
6 4f9i_A Proline dehydrogenase/d 100.0 8.1E-71 2.8E-75 631.1 37.6 359 65-477 80-459 (1026)
7 1i60_A IOLI protein; beta barr 88.1 8.9 0.0003 35.8 14.0 98 133-281 48-147 (278)
8 3cqj_A L-ribulose-5-phosphate 84.6 17 0.0006 34.5 14.2 127 129-310 64-196 (295)
9 3dx5_A Uncharacterized protein 84.2 12 0.0004 35.4 12.7 56 250-309 116-171 (286)
10 3tva_A Xylose isomerase domain 84.1 15 0.0005 34.8 13.4 30 250-279 132-161 (290)
11 3u0h_A Xylose isomerase domain 83.5 19 0.00064 33.7 13.7 94 133-278 49-143 (281)
12 3kws_A Putative sugar isomeras 80.2 40 0.0014 31.7 15.6 100 131-278 64-167 (287)
13 3qxb_A Putative xylose isomera 78.5 48 0.0016 31.8 15.0 100 132-277 71-179 (316)
14 3ngf_A AP endonuclease, family 75.6 31 0.0011 32.2 12.5 28 250-277 124-151 (269)
15 3cny_A Inositol catabolism pro 74.0 32 0.0011 32.4 12.2 56 250-309 134-189 (301)
16 1k77_A EC1530, hypothetical pr 73.3 48 0.0016 30.5 13.0 30 249-278 116-145 (260)
17 3obe_A Sugar phosphate isomera 72.7 16 0.00054 35.4 9.7 29 250-278 143-171 (305)
18 3qc0_A Sugar isomerase; TIM ba 68.2 33 0.0011 31.8 10.6 97 132-278 46-144 (275)
19 3vni_A Xylose isomerase domain 67.1 83 0.0028 29.4 14.3 105 129-279 45-154 (294)
20 3bdk_A D-mannonate dehydratase 66.6 28 0.00094 35.6 10.3 32 249-280 192-223 (386)
21 2hk0_A D-psicose 3-epimerase; 57.3 1.3E+02 0.0045 28.4 14.9 101 131-278 66-172 (309)
22 1xla_A D-xylose isomerase; iso 51.1 82 0.0028 31.6 10.6 30 249-278 151-182 (394)
23 3l23_A Sugar phosphate isomera 49.8 99 0.0034 29.5 10.6 27 250-276 137-165 (303)
24 3tr9_A Dihydropteroate synthas 48.6 1.8E+02 0.0063 28.7 12.4 35 119-157 40-74 (314)
25 2qw5_A Xylose isomerase-like T 41.7 1.7E+02 0.0057 28.1 11.0 30 249-278 156-185 (335)
26 3ayv_A Putative uncharacterize 40.1 2.1E+02 0.0073 25.9 12.2 30 250-279 110-139 (254)
27 2qul_A D-tagatose 3-epimerase; 40.1 2.2E+02 0.0077 26.1 12.9 29 250-278 126-154 (290)
28 1tvn_A Cellulase, endoglucanas 34.0 70 0.0024 30.4 6.6 44 254-298 76-123 (293)
29 1qtw_A Endonuclease IV; DNA re 34.0 2.8E+02 0.0095 25.4 11.3 96 130-278 46-147 (285)
30 1muw_A Xylose isomerase; atomi 33.6 1.7E+02 0.0058 29.0 9.7 30 249-278 151-182 (386)
31 1iv8_A Maltooligosyl trehalose 32.2 62 0.0021 35.8 6.5 36 119-154 5-41 (720)
32 2zds_A Putative DNA-binding pr 31.5 94 0.0032 29.7 7.2 32 249-280 152-183 (340)
33 1egz_A Endoglucanase Z, EGZ, C 31.2 76 0.0026 30.0 6.3 45 254-298 74-121 (291)
34 1xim_A D-xylose isomerase; iso 30.8 1.5E+02 0.005 29.6 8.7 29 250-278 152-182 (393)
35 1ji1_A Alpha-amylase I; beta/a 30.2 92 0.0032 33.5 7.4 31 123-154 184-216 (637)
36 1tz9_A Mannonate dehydratase; 29.3 1E+02 0.0035 30.4 7.1 31 249-279 190-220 (367)
37 3m0m_A L-rhamnose isomerase; b 29.2 3.6E+02 0.012 27.8 11.4 95 249-348 193-292 (438)
38 3aam_A Endonuclease IV, endoiv 28.1 3.2E+02 0.011 24.9 10.1 26 253-278 115-141 (270)
39 2ovl_A Putative racemase; stru 27.9 1.9E+02 0.0063 28.7 8.8 20 256-275 279-298 (371)
40 1a0c_A Xylose isomerase; ketol 27.8 3.8E+02 0.013 27.5 11.3 86 250-341 203-299 (438)
41 3qr3_A Endoglucanase EG-II; TI 27.1 1.2E+02 0.0041 30.1 7.1 27 255-281 82-108 (340)
42 2jvf_A De novo protein M7; tet 26.4 69 0.0024 24.9 3.9 44 251-294 30-74 (96)
43 2rdx_A Mandelate racemase/muco 26.3 3.8E+02 0.013 26.4 10.9 26 256-281 274-300 (379)
44 1h1n_A Endo type cellulase ENG 26.0 1.2E+02 0.0041 29.0 6.8 44 255-298 70-121 (305)
45 2cks_A Endoglucanase E-5; carb 25.5 99 0.0034 29.6 6.0 43 255-298 78-127 (306)
46 3i4k_A Muconate lactonizing en 23.7 3.5E+02 0.012 26.9 10.0 21 256-276 282-302 (383)
47 1mdl_A Mandelate racemase; iso 23.1 1.4E+02 0.005 29.3 6.9 22 256-277 277-298 (359)
48 3l55_A B-1,4-endoglucanase/cel 23.0 1.5E+02 0.0052 29.4 7.0 26 255-280 89-114 (353)
49 2vp8_A Dihydropteroate synthas 22.7 4.8E+02 0.016 25.7 10.4 28 250-277 188-218 (318)
50 1rvk_A Isomerase/lactonizing e 22.2 95 0.0032 31.0 5.3 23 256-278 289-311 (382)
51 1bxb_A Xylose isomerase; xylos 22.2 2.2E+02 0.0075 28.2 8.1 29 250-278 152-182 (387)
52 2qgy_A Enolase from the enviro 22.1 2E+02 0.007 28.7 7.8 25 256-280 282-306 (391)
53 2pgw_A Muconate cycloisomerase 21.7 2.6E+02 0.0089 27.7 8.5 22 256-277 278-299 (384)
54 7a3h_A Endoglucanase; hydrolas 21.7 1.2E+02 0.004 29.1 5.7 43 255-298 78-127 (303)
55 3ndz_A Endoglucanase D; cellot 21.6 1.9E+02 0.0065 28.3 7.4 26 255-280 81-106 (345)
56 3erp_A Putative oxidoreductase 21.6 2.3E+02 0.0079 27.8 8.0 64 382-448 178-247 (353)
57 4hty_A Cellulase; (alpha/beta) 21.4 1.7E+02 0.0058 28.7 7.0 26 254-279 118-143 (359)
58 1qnr_A Endo-1,4-B-D-mannanase; 20.9 90 0.0031 30.0 4.7 24 256-279 89-112 (344)
59 3icg_A Endoglucanase D; cellul 20.9 1.8E+02 0.0062 30.2 7.4 26 255-280 84-109 (515)
60 3vup_A Beta-1,4-mannanase; TIM 20.3 77 0.0026 29.5 4.0 25 255-279 88-112 (351)
61 2qde_A Mandelate racemase/muco 20.2 2.4E+02 0.0083 28.2 7.9 27 256-282 277-304 (397)
62 1ece_A Endocellulase E1; glyco 20.1 1.8E+02 0.006 28.2 6.7 25 255-279 93-117 (358)
63 1g94_A Alpha-amylase; beta-alp 20.1 53 0.0018 33.6 2.9 22 256-277 64-85 (448)
No 1
>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2
Probab=100.00 E-value=1.2e-80 Score=680.57 Aligned_cols=359 Identities=21% Similarity=0.222 Sum_probs=314.1
Q ss_pred ccCChhhHhhcCCHHHHHHHHHhhhhccCcchhhhhHHhhhhhhcCchHHhHHHHHHHHHHhhcceeccCChHHHHHHHH
Q 042033 59 DINDHEKLFSLLSTTKLIRAAANLHLAAVEPLVDFGVWVMNSRLMDIDLAREVVMCTVRHSFYEHFCAGENAPEATDCVR 138 (490)
Q Consensus 59 ~F~d~~~af~~~st~~Llrs~~v~~l~s~~~lv~~~~~ll~~~~~~~~~~~~~~~~~~k~Tf~~~FvaGEt~~e~~~~i~ 138 (490)
.|++.+++|.++|||+|++++.|+++|+.+.+++....+++. .+.|+++.++...|| +||+|||+|||++|++++++
T Consensus 197 h~~~s~s~~~~astw~L~~t~~v~~~~~~~~~~~~l~~ll~~--~~~p~ir~~v~~~mr-~~~~qFVaGet~~ea~~~i~ 273 (669)
T 1k87_A 197 HIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGK--SGEPLIRKGVDMAMR-LMGEQFVTGETIAEALANAR 273 (669)
T ss_dssp ---CCCTTTTSTTHHHHHSCC------CHHHHHHHHHHHTTT--TCHHHHHHHHHHHHH-HHHGGGCSBSSHHHHHHHHH
T ss_pred HhCCCchhhHhHHHHHHHHhhhhhhccccccHHHHHHHHHHh--cccHHHHHHHHHHHH-HhhCeeeCCCCHHHHHHHHH
Confidence 588999999999999999999999999988899998888875 688888888888877 89999999999999999999
Q ss_pred HHHhCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCCCC----CCCeEEEEeCCcCchhHHHHhHHHhhhhhcCC
Q 042033 139 RVNDAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLPPE----SASFVIAKISAICPMSLLQRVSDLLRWQQRDP 214 (490)
Q Consensus 139 ~L~~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~~~----~~~~vsvKlTaLg~~~ll~~~s~~l~~~~~~~ 214 (490)
+|++.|++++|||+||++.++++|+++++.|+++|+.++....+ ..++||||+||||+.. +
T Consensus 274 ~L~~~G~~~slD~LGEa~~t~~eA~~~~~~y~~~I~~i~~~~~~~~~~~~~~VSVKlSaLg~~~-----~---------- 338 (669)
T 1k87_A 274 KLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRY-----S---------- 338 (669)
T ss_dssp HHHTTTCEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHSCEEEECGGGTSTTG-----G----------
T ss_pred HHHhCCCeEEEEeeccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEecccccccc-----c----------
Confidence 99999999999999999999999999999999999987643211 2569999999999631 0
Q ss_pred CCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCchhHHHHHHHHHH
Q 042033 215 SFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQPAIDYLTYNAA 294 (490)
Q Consensus 215 ~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q~aId~~~~~l~ 294 (490)
. .+++..++.+++|+++||++|+++||+|+||||+++++ .++++++
T Consensus 339 ----------------------------~--~~~~~~~~~l~~rl~~L~~~A~~~gv~v~IDAEe~~~~----~lTLdl~ 384 (669)
T 1k87_A 339 ----------------------------R--AQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRL----EISLDLL 384 (669)
T ss_dssp ----------------------------G--CCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGH----HHHHHHH
T ss_pred ----------------------------h--hhhhhHHHHHHHHHHHHHHHHHHcCCEEEEeCCCcchh----HHHHHHH
Confidence 0 12446788999999999999999999999999999985 3677788
Q ss_pred HhcCcC----CCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchhhHHHhhcCCCC-CCccCHHHHHH
Q 042033 295 LSNNKA----GKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSESKLAASLGFDS-PIHNSIQETHA 369 (490)
Q Consensus 295 ~~~N~~----~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E~~~A~~~G~~~-Pi~~tk~~Td~ 369 (490)
++||++ .++.||+|||||||||+++|++++++|++.|+++||||||||||++|+++|++.||++ |||++|++||.
T Consensus 385 ~~l~~~~~~~~~~~vGivlQAYLkrt~~~l~~l~~~A~~~G~~l~VRLVKGAY~e~E~~~Aq~~G~~~~Pv~~~K~~TD~ 464 (669)
T 1k87_A 385 EKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDV 464 (669)
T ss_dssp HHHTTCGGGTTCCCEEEEEETTBTTHHHHHHHHHHHHHHTTSCEEEEEECCSCHHHHHHHHHHHTCSSCSBCSSHHHHHH
T ss_pred HHHhcCcccccCCCceEEEechhhccHHHHHHHHHHHHHcCCCceEEEecCCCCchHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 889863 2677889999999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCChHHHHHHHh------CCCCCeeE
Q 042033 370 CYNDCASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAEALSYGLRN------AGFQVSKY 443 (490)
Q Consensus 370 ~Y~~~~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D~ls~~L~~------~G~~V~kY 443 (490)
||++|+++||++ .+.++++|||||+.||..+.+++.+ |++ .+.|||||||||+|++++.|++ .||+||||
T Consensus 465 ~Y~~~~~~lL~~--~~~i~p~~ATHN~~sia~a~~la~~-~~~-~~~~EFqqL~GM~d~l~~~L~~~~~~~~~G~~vr~Y 540 (669)
T 1k87_A 465 SYLACAKKLLAV--PNLIYPQFATHNAHTLAAIYQLAGQ-NYY-PGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY 540 (669)
T ss_dssp HHHHHHHHHHTC--TTTEEEEEECCCHHHHHHHHHHTCS-SCC-GGGCEEEEETTTSHHHHTTTSSCGGGTCCCCCEEEE
T ss_pred HHHHHHHHHHcC--CCCeeeeeccCCHHHHHHHHHHHHc-CCC-CCcEEEeccCCCCHHHHHHHHhhcccccCCCCeEEE
Confidence 999999999984 2346899999999999999988865 665 3589999999999999999998 79999999
Q ss_pred eeccCccccHHHHHHHHHhhhccccccHHHHHH
Q 042033 444 MPFGPVDKIIPYLLRRAEENRGFLSASNLDRQL 476 (490)
Q Consensus 444 vPyG~~~e~lpYL~RRa~EN~~~l~~~~~e~~l 476 (490)
+|||++++|||||+||++||+ ++++|.++.
T Consensus 541 vP~G~~~d~l~YLvRRl~EN~---an~sFv~~~ 570 (669)
T 1k87_A 541 APVGTHETLLAYLVRRLLENG---ANTSFVNRI 570 (669)
T ss_dssp EEECCGGGTHHHHHHHHHHHH---CTTSHHHHT
T ss_pred eeCCchHHHHHHHHHHHHhcc---chhHHHHHh
Confidence 999999999999999999999 788887764
No 2
>3e2q_A Proline oxidase, proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, DNA-binding, FAD, flavoprotein, multifunctional enzyme, NAD; HET: FAD 1PE; 1.75A {Escherichia coli} PDB: 3e2r_A* 3e2s_A* 1tj2_A* 1tiw_A* 1tj0_A* 1tj1_A* 2fzm_A* 2fzn_A* 3itg_A*
Probab=100.00 E-value=3.7e-78 Score=645.61 Aligned_cols=360 Identities=21% Similarity=0.205 Sum_probs=280.7
Q ss_pred ccCChhhHhhcCCHHHHHHHHHhhhhccCcchhhhhHHhhhhhhcCchHHhHHHHHHHHHHhhcceeccCChHHHHHHHH
Q 042033 59 DINDHEKLFSLLSTTKLIRAAANLHLAAVEPLVDFGVWVMNSRLMDIDLAREVVMCTVRHSFYEHFCAGENAPEATDCVR 138 (490)
Q Consensus 59 ~F~d~~~af~~~st~~Llrs~~v~~l~s~~~lv~~~~~ll~~~~~~~~~~~~~~~~~~k~Tf~~~FvaGEt~~e~~~~i~ 138 (490)
...+.++.|.+.|||.|+-+..++..-.-+.+...-..++. ..+.|++|..+...|| ++++|||+|||++||+++++
T Consensus 112 h~~~s~s~~vna~~w~l~lt~~~~~~~~~~~~~~~l~~l~~--~~g~p~ir~~v~~a~r-~~~~qFVaGeTi~eAl~~~~ 188 (551)
T 3e2q_A 112 HIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIG--KSGEPLIRKGVDMAMR-LMGEQFVTGETIAEALANAR 188 (551)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHH-HHHGGGCCBSSHHHHHHTCH
T ss_pred hcCCCchHHHHHHHHHHHHhhhhcCcccccchhHHHHHHHH--HhCCHHHHHHHHHHHH-HhhCeecCCCCHHHHHHHHH
Confidence 35667889999999999999998864322222222223343 3688888888888886 89999999999999999999
Q ss_pred HHHhCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCCCC----CCCeEEEEeCCcCchhHHHHhHHHhhhhhcCC
Q 042033 139 RVNDAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLPPE----SASFVIAKISAICPMSLLQRVSDLLRWQQRDP 214 (490)
Q Consensus 139 ~L~~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~~~----~~~~vsvKlTaLg~~~ll~~~s~~l~~~~~~~ 214 (490)
+|++.|+++++||+||++.++++++++.+.|+++|+.++....+ ..++||||+|+||+..
T Consensus 189 ~l~~~G~~~slD~LGEav~te~eA~~~~~~y~~~I~ai~~~~~~~~~~~~~~VSVKlSaLg~~~---------------- 252 (551)
T 3e2q_A 189 KLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRY---------------- 252 (551)
T ss_dssp HHHTTTCEEEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHHTTCHHHHSCEEEECHHHHSTTG----------------
T ss_pred HHHhCCCEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCeEEEehhhcCccc----------------
Confidence 99999999999999999999999999999999999987643211 1259999999999621
Q ss_pred CCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCchhHHHHHHHHHH
Q 042033 215 SFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQPAIDYLTYNAA 294 (490)
Q Consensus 215 ~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q~aId~~~~~l~ 294 (490)
. + .+.+..++.+++|+++||+.|+++||+|+||||++++++ ++++++
T Consensus 253 ---------------------~------~--~~~~~v~~~l~~rl~~L~~~A~~~gv~v~IDAEe~~~~d----lTLdl~ 299 (551)
T 3e2q_A 253 ---------------------S------R--AQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLE----ISLDLL 299 (551)
T ss_dssp ---------------------G------G--CCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGHH----HHHHHH
T ss_pred ---------------------c------h--HHHHHHHHHHHHHHHHHHHHHHHcCCEEEEeCCccchhH----HHHHHH
Confidence 0 0 112456778999999999999999999999999999863 777788
Q ss_pred HhcCcC----CCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchhhHHHhhcCCCC-CCccCHHHHHH
Q 042033 295 LSNNKA----GKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSESKLAASLGFDS-PIHNSIQETHA 369 (490)
Q Consensus 295 ~~~N~~----~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E~~~A~~~G~~~-Pi~~tk~~Td~ 369 (490)
++||++ .++.+|+|||||||||+++|++++++|++.|+++||||||||||++|+++|++.|||+ |||++|++||.
T Consensus 300 ~~l~~~~~~~~~~~~GitlQAYLkrt~~~L~~l~~lA~~~G~~i~VRLVKGAY~e~E~~~A~~~G~~~~pv~~~K~~TD~ 379 (551)
T 3e2q_A 300 EKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDV 379 (551)
T ss_dssp HHHHTCGGGTTCCCEEEEEETTBTTHHHHHHHHHHHHHHTTCCEEEEEECCSCHHHHHHHHHHHTCSSCSBCSSHHHHHH
T ss_pred HHHhcCCccccCCCceEEeechHhhhHHHHHHHHHHHHHhCCcceeEEecCCCcchhHHHHHhcCCCCCcccCCHHHHHH
Confidence 899863 3677888999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCChHHHHHHHh------CCCCCeeE
Q 042033 370 CYNDCASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAEALSYGLRN------AGFQVSKY 443 (490)
Q Consensus 370 ~Y~~~~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D~ls~~L~~------~G~~V~kY 443 (490)
||++|+++||++. ..++++|||||+.||..+.+++. .++ ..++|||||||||+|++++.|++ .||+||||
T Consensus 380 ~Y~~~~~~lL~~~--~~~~p~~ATHN~~sia~a~~la~-~~~-~~~~~EFqqL~GM~d~l~~~L~~~~~~~~~G~~vr~Y 455 (551)
T 3e2q_A 380 SYLACAKKLLAVP--NLIYPQFATHNAHTLAAIYQLAG-QNY-YPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIS 455 (551)
T ss_dssp HHHHHHHHHHTCT--TTEEEEEECCCHHHHHHHHHHTC-SSC-CGGGCEEEEETTTSHHHHTTTSSCGGGTCCCCCEEEE
T ss_pred HHHHHHHHHHcCC--cccceeeecCCHHHHHHHHHHHh-cCC-CCCCEEEEeCCcCChHHHHHHHHhhccccCCCCeEEE
Confidence 9999999999853 23689999999999999988764 333 34689999999999999999987 59999999
Q ss_pred eeccCccccHHHHHHHHHhhhccccccHHHHHHH
Q 042033 444 MPFGPVDKIIPYLLRRAEENRGFLSASNLDRQLM 477 (490)
Q Consensus 444 vPyG~~~e~lpYL~RRa~EN~~~l~~~~~e~~ll 477 (490)
+||||+++|||||+||++||+ ++++|.+++.
T Consensus 456 vPyG~~~e~lpYLvRRl~EN~---aN~sFv~~~~ 486 (551)
T 3e2q_A 456 APVGTHETLLAYLVRRLLENG---ANTSFVNRIA 486 (551)
T ss_dssp EEECCGGGCHHHHHHHHHHHH---CTTSHHHHTT
T ss_pred eecCchHHHHHHHHHHHHhcc---hhHHHHHHhh
Confidence 999999999999999999999 8888887754
No 3
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=9.8e-76 Score=670.37 Aligned_cols=358 Identities=21% Similarity=0.203 Sum_probs=314.6
Q ss_pred cCChhhHhhcCCHHHHHHHHHhhhhccCcchhhhhHHhhhhhhcCchHHhHHHHHHHHHHhhcceeccCChHHHHHHHHH
Q 042033 60 INDHEKLFSLLSTTKLIRAAANLHLAAVEPLVDFGVWVMNSRLMDIDLAREVVMCTVRHSFYEHFCAGENAPEATDCVRR 139 (490)
Q Consensus 60 F~d~~~af~~~st~~Llrs~~v~~l~s~~~lv~~~~~ll~~~~~~~~~~~~~~~~~~k~Tf~~~FvaGEt~~e~~~~i~~ 139 (490)
..+.++.|.+.|||.|+-+..++..- +.+...-.+++++ ++.|++|..+...|| +||+|||+|||++||++++++
T Consensus 110 ~~~~~~~~vn~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~--~~~p~ir~~~~~~~r-~~~~qFvaGet~~eal~~~~~ 184 (1001)
T 3haz_A 110 ETKSTAFLVNASAWALGLSARVIQPG--ETPDGTIGRLVKR--LGAPAVRTATRQAMR-LMGNHFVLGETIEQALERGKP 184 (1001)
T ss_dssp HHHHHHTTTCGGGCC----CCCCCTT--CCCCHHHHHHHHH--HCHHHHHHHHHHHHH-HHHHHCEEESSHHHHHHHHCC
T ss_pred cCCCchHHHHHHHHHHHhhhhhcCcC--cchhHHHHHHHhh--hccHHHHHHHHHHHH-HhhCeeecCCCHHHHHHHHHH
Confidence 55678899999999999999888643 3233333345553 788999999999997 699999999999999999999
Q ss_pred HHhCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCC----CCCCCeEEEEeCCcCchhHHHHhHHHhhhhhcCCC
Q 042033 140 VNDAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLP----PESASFVIAKISAICPMSLLQRVSDLLRWQQRDPS 215 (490)
Q Consensus 140 L~~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~----~~~~~~vsvKlTaLg~~~ll~~~s~~l~~~~~~~~ 215 (490)
|++.|+..++||+||++.++++++++.+.|+++|+.++... ....++||||+|+||+..
T Consensus 185 l~~~G~~~sld~lgE~~~~~~eA~~~~~~y~~~i~~i~~~~~~~~~~~~~~vSvKlSalg~~~----------------- 247 (1001)
T 3haz_A 185 RSGQKTRYSFDMLGEGARTAADARRYFDAYASAIETIGKAAGNHALPDRPGISVKLSALHPRF----------------- 247 (1001)
T ss_dssp SSSCCCSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHTCCSCCTTSSCEEEECHHHHCTTC-----------------
T ss_pred HHhCCCEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCeEEEeccccCcch-----------------
Confidence 99999999999999999999999999999999999886432 223579999999998620
Q ss_pred CCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCchhHHHHHHHHHHH
Q 042033 216 FNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQPAIDYLTYNAAL 295 (490)
Q Consensus 216 ~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q~aId~~~~~l~~ 295 (490)
+. .+++..++.+++|+++||++|+++|++|+||||++++|+.++.+...+++
T Consensus 248 --------------------------~~--~~~~~~~~~~~~rl~~l~~~A~~~~v~v~iDaEe~~~~~~tl~~~~~l~~ 299 (1001)
T 3haz_A 248 --------------------------EA--ISRARVMVELVPQLLDLAQRAKAHDLNFTVDAEEADRLELSLDVIAATLA 299 (1001)
T ss_dssp --------------------------SG--GGHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCGGGHHHHHHHHHHHHT
T ss_pred --------------------------hh--hhhhhHHHHHHHHHHHHHHHHHHcCCEEEEeCCcchhhHHHHHHHHHHhc
Confidence 00 23456788999999999999999999999999999998888888889999
Q ss_pred hcCcCCCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchhhHHHhhcCCCC-CCccCHHHHHHHHHHH
Q 042033 296 SNNKAGKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSESKLAASLGFDS-PIHNSIQETHACYNDC 374 (490)
Q Consensus 296 ~~N~~~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E~~~A~~~G~~~-Pi~~tk~~Td~~Y~~~ 374 (490)
++|..+++.||+|||||||||+++|++++++|+++|+++||||||||||++|+++|++.||++ |||++|++||.||++|
T Consensus 300 ~~~~~~~~~vg~t~QaYlkrt~~~l~~l~~~A~~~g~~~~vRLVKGAY~~~E~~~a~~~g~~~~pv~~~K~~tD~~Y~~~ 379 (1001)
T 3haz_A 300 DPSLKGWDGFGLAIQAYQKRASAVIDYVDALARAHDRKLMVRLVKGAYWDTEIKRAQERGLDGYPVFTRKAMTDLNYVAC 379 (1001)
T ss_dssp SGGGTTCCCEEEEEETTBTTHHHHHHHHHHHHHHTTCCEEEEEECCSCHHHHHHHHHHTTCSSCSBCSSHHHHHHHHHHH
T ss_pred ccccCCCCceEEEEeCcccccHHHHHHHHHHHHHcCCcceEEEecCCCcchHHHHHHhcCCCCCCccCChHHHHHHHHHH
Confidence 999778999999999999999999999999999999999999999999999999999999995 9999999999999999
Q ss_pred HHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCChHHHHHHHhC--CCCCeeEeeccCcccc
Q 042033 375 ASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAEALSYGLRNA--GFQVSKYMPFGPVDKI 452 (490)
Q Consensus 375 ~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D~ls~~L~~~--G~~V~kYvPyG~~~e~ 452 (490)
+++||++. +.++++|||||+.||..+.+++.+ +++|||||||||+|++++.|++. ||+||||+||||+++|
T Consensus 380 ~~~ll~~~--~~~~~~~ATHN~~si~~a~~l~~~-----~~~~eFq~L~GM~d~l~~~L~~~~~g~~vr~YvP~G~~~e~ 452 (1001)
T 3haz_A 380 ASKLLALR--PRIFPQFATHNALTVATVLEMAEG-----SSGFEFQRLHGMGEALYEQLAKDHADIAYRTYAPVGSHRDL 452 (1001)
T ss_dssp HHHHHTTT--TTEEEEEECCCHHHHHHHHHHHSS-----SSSCEEEEETTSSHHHHHHHHHHCTTCCEEEEEEEEEGGGH
T ss_pred HHHHHccc--cCcceEEeCCCHHHHHHHHHHhcC-----CCCEEEecCCCCCHHHHHHHHhhcCCCCEEEEeeCCcHHHh
Confidence 99999864 346899999999999999988754 35899999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHhhhccccccHHHHHHH
Q 042033 453 IPYLLRRAEENRGFLSASNLDRQLM 477 (490)
Q Consensus 453 lpYL~RRa~EN~~~l~~~~~e~~ll 477 (490)
||||+||++||+ ++++|.+++.
T Consensus 453 l~YLvRRl~EN~---an~sf~~~~~ 474 (1001)
T 3haz_A 453 LAYLVRRLLENG---ANSSFVAQAA 474 (1001)
T ss_dssp HHHHHHHHHHHT---CTTCHHHHHT
T ss_pred HHHHHHHHHhcc---chHHHHHHhc
Confidence 999999999999 8888888764
No 4
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=100.00 E-value=3.9e-74 Score=581.73 Aligned_cols=284 Identities=20% Similarity=0.242 Sum_probs=250.1
Q ss_pred HHHHHHH---HhhcceeccCChHHHHHHHHHHHhCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEE
Q 042033 112 VMCTVRH---SFYEHFCAGENAPEATDCVRRVNDAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLPPESASFVI 188 (490)
Q Consensus 112 ~~~~~k~---Tf~~~FvaGEt~~e~~~~i~~L~~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vs 188 (490)
++.++|+ +|++|||||||++||++++++|++.|++++|||+||++.++++++++.+.|+++|+.++..+. .++||
T Consensus 21 l~~~~~~~~~~~~~~FvaGet~~ea~~~~~~l~~~G~~~~ld~lGE~~~~~~eA~~~~~~yl~~i~~i~~~~~--~~~vS 98 (312)
T 4h6q_A 21 VEQLARQKMWNLAERFVAGESIESAIQAVQALERDGIAGNLDLLGEFIDSPAKCTEFADDVIKLIEAAHAAGI--KPYVS 98 (312)
T ss_dssp GGHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHTTC--CCEEE
T ss_pred HHHHHHhcchhhhCEeeCcCCHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHhCCC--CCeEE
Confidence 3444444 999999999999999999999999999999999999999999999999999999999986553 46999
Q ss_pred EEeCCcCchhHHHHhHHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHh
Q 042033 189 AKISAICPMSLLQRVSDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLE 268 (490)
Q Consensus 189 vKlTaLg~~~ll~~~s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~ 268 (490)
||+|+||+.. + +| . .+.+.+|+++||++|++
T Consensus 99 vKlSalg~~~-----~--------------~~-------------------------~-----~~~~~~~l~~i~~~A~~ 129 (312)
T 4h6q_A 99 IKLSSVGQGK-----D--------------EN-------------------------G-----EDLGLTNARRIIAKAKE 129 (312)
T ss_dssp ECGGGTTTTC-----E--------------ET-------------------------T-----EEHHHHHHHHHHHHHHH
T ss_pred Eehhhccccc-----C--------------cc-------------------------c-----HHHHHHHHHHHHHHHHH
Confidence 9999999620 0 00 0 12468999999999999
Q ss_pred cCCcEEEcCCccCchhHHHHHHHHHHHhcCcCCCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchhh
Q 042033 269 ANVPLTVDAEDTFVQPAIDYLTYNAALSNNKAGKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSES 348 (490)
Q Consensus 269 ~gv~v~IDAE~s~~q~aId~~~~~l~~~~N~~~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E~ 348 (490)
+||+|+||||++++|++++.+..+++++| ++|.||+|||||||||+++|+++++ +++||||||||||++|
T Consensus 130 ~~v~v~iDaEe~~~~~~tl~~~~~l~~~~---~~~~vg~t~QaYlkrt~~~l~~l~~------~~~~vRLVKGAY~e~E- 199 (312)
T 4h6q_A 130 YGGFICLDMEDHTRVDVTLEQFRTLVGEF---GAEHVGTVLQSYLYRSLGDRASLDD------LRPNIRMVKGAYLEPA- 199 (312)
T ss_dssp TTCEEEECCCSGGGHHHHHHHHHHHHHHH---CTTTEEEEEETTBTTHHHHHHHTGG------GCCCEEEECCCSCCCT-
T ss_pred cCCEEEEccCcccchHHHHHHHHHHHHHc---CCCcEEEEeehhccccHHHHHHHHh------cCCCeEEecCcccCCc-
Confidence 99999999999999998888888999887 5789999999999999999999873 7899999999999999
Q ss_pred HHHhhcCCCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCChH
Q 042033 349 KLAASLGFDSPIHNSIQETHACYNDCASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAEA 428 (490)
Q Consensus 349 ~~A~~~G~~~Pi~~tk~~Td~~Y~~~~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D~ 428 (490)
+|+|++|++||.||++|++.++++ .++++|||||+.||..+.+++.++|++. +.|||||||||+|+
T Consensus 200 ---------~~~~~~k~~tD~~Y~~~~~~ll~~----~~~~~vATHN~~si~~a~~l~~~~g~~~-~~~eFq~L~GM~d~ 265 (312)
T 4h6q_A 200 ---------TVAYPDKADVDQNYRRLVFQHLKA----GNYTNVATHDERIIDDVKRFVLAHGIGK-DAFEFQMLYGIRRD 265 (312)
T ss_dssp ---------TTBCSSHHHHHHHHHHHHHHHHHT----TCCEEEECCCHHHHHHHHHHHHHTTCCT-TSEEEEEETTSCHH
T ss_pred ---------ccccCCHHHHHHHHHHHHHHHHhC----CCceeEecCCHHHHHHHHHHHHHcCCCC-CCEEEEccCCCCHH
Confidence 599999999999999999999984 4689999999999999999999999974 46999999999999
Q ss_pred HHHHHHhCCCCCeeEeeccCccccHHHHHHHHHhhhccccccHHHHH
Q 042033 429 LSYGLRNAGFQVSKYMPFGPVDKIIPYLLRRAEENRGFLSASNLDRQ 475 (490)
Q Consensus 429 ls~~L~~~G~~V~kYvPyG~~~e~lpYL~RRa~EN~~~l~~~~~e~~ 475 (490)
+++.|++.||+||||+|||| +|+|||+||++||+ ++++|-.+
T Consensus 266 l~~~L~~~g~~vr~YvP~G~--~~~~YL~RRl~EN~---aN~~f~~r 307 (312)
T 4h6q_A 266 LQKQLAAEGYRVRVYLPYGR--DWYAYFSRRIAETP---RNAAFVVQ 307 (312)
T ss_dssp HHHHHHHTTCCEEEEEEESS--CCHHHHHHHHHTCC-----------
T ss_pred HHHHHHhcCCCEEEEeEEcc--chHHHHHHHHHhch---HHHHHHHH
Confidence 99999999999999999998 99999999999999 77777544
No 5
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=100.00 E-value=3e-73 Score=578.62 Aligned_cols=281 Identities=22% Similarity=0.275 Sum_probs=245.0
Q ss_pred HHHHHHHHH---hhcceeccCChHHHHHHHHHHHhCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeE
Q 042033 111 VVMCTVRHS---FYEHFCAGENAPEATDCVRRVNDAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLPPESASFV 187 (490)
Q Consensus 111 ~~~~~~k~T---f~~~FvaGEt~~e~~~~i~~L~~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~v 187 (490)
.++.+++++ ||+|||+|||++|+++++++|++.|++++|||+||++.++++|+++++.|+++|+.++..+ ..++|
T Consensus 39 ~l~~~v~~~~~~~~~~FvaGet~~ea~~~~~~l~~~G~~~~ld~lgE~~~~~~~a~~~~~~yl~~i~~i~~~~--~~~~v 116 (327)
T 2ekg_A 39 QVERLIKHRAKGLVRRYVAGETLEEALKAAEALEREGVHAILDLLGEMVRTEEEARAFQRGLLELVWALAGKP--WPKYI 116 (327)
T ss_dssp HHHHHHHHHCHHHHHHHCCCSSHHHHHHHHHHHHHTTCEEEEEEECSCCCSHHHHHHHHHHHHHHHHHHTTCS--SCEEE
T ss_pred HHHHHHHHhhHhhhceeeCCCCHHHHHHHHHHHHhCCCEEEEeccccccCCHHHHHHHHHHHHHHHHHHHhcC--CCCeE
Confidence 355666664 9999999999999999999999999999999999999999999999999999999998654 35699
Q ss_pred EEEeCCcCchhHHHHhHHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 042033 188 IAKISAICPMSLLQRVSDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECL 267 (490)
Q Consensus 188 svKlTaLg~~~ll~~~s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~ 267 (490)
|||+||||++ + +++.+++|+++||++|+
T Consensus 117 SvKlSalg~~----------------------------------------------~------~~~~~~~rl~~i~~~A~ 144 (327)
T 2ekg_A 117 SLXLTQLGLD----------------------------------------------L------SEDLALALLREVLREAE 144 (327)
T ss_dssp EECGGGGTTT----------------------------------------------T------CHHHHHHHHHHHHHHHG
T ss_pred EEEcccCccc----------------------------------------------c------CHHHHHHHHHHHHHHHH
Confidence 9999999963 1 14568999999999999
Q ss_pred hcCCcEEEcCCccCchhHHHHHHHHHHHhcCcCCCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchh
Q 042033 268 EANVPLTVDAEDTFVQPAIDYLTYNAALSNNKAGKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSE 347 (490)
Q Consensus 268 ~~gv~v~IDAE~s~~q~aId~~~~~l~~~~N~~~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E 347 (490)
++||+|+||||+++++++ ++++++++|++++|.||+|||||||||+++|+++. |+++||||||||||++|
T Consensus 145 ~~gv~v~IDaEe~~~~~~----tl~l~~~l~~~~~~~vg~tlQAYLkrt~~~l~~L~------~~~~~vRLVKGAY~e~E 214 (327)
T 2ekg_A 145 PRGVFVRLDMEDSPRVEA----TLRLYRALREEGFSQVGIVLQSYLYRTEKDLLDLL------PYRPNLRLVKGAYREPK 214 (327)
T ss_dssp GGTEEEEECCCCGGGHHH----HHHHHHHHHHTTCCSEEEEEETTBTTHHHHHHHHG------GGCCCEEEECCCSCCCT
T ss_pred HcCCEEEEcCccccchHH----HHHHHHHHhhcCCCceEEEEeCcccccHHHHHHHh------CCCCceEEccCCCcCcc
Confidence 999999999999997652 44455566652388999999999999999999965 88999999999999999
Q ss_pred hHHHhhcCCCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCCh
Q 042033 348 SKLAASLGFDSPIHNSIQETHACYNDCASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAE 427 (490)
Q Consensus 348 ~~~A~~~G~~~Pi~~tk~~Td~~Y~~~~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D 427 (490)
+ .+|++|++||.||++|++++|++ ..+++|||||+.||..|.+++.++|++. .+|||||||||+|
T Consensus 215 ~----------~~~~~K~~tD~~Y~~~~~~lL~~----~~~~~vATHN~~si~~a~~l~~~~gi~~-~~~eFq~L~GM~d 279 (327)
T 2ekg_A 215 E----------VAFPDKRLIDAEYLHLGKLALKE----GLYVAFATHDPRIIAELKRYTEAMGIPR-SRFEFQFLYGVRP 279 (327)
T ss_dssp T----------TBCSCHHHHHHHHHHHHHHHHHT----TCCEEEECCCHHHHHHHHHHHHHTTCCG-GGEEEEEETTSSH
T ss_pred c----------cccCCHHHHHHHHHHHHHHHhcC----CCceeEeCCCHHHHHHHHHHHHHcCCCC-CCEEEEcCCCCCH
Confidence 7 38899999999999999999985 3489999999999999999999999974 4799999999999
Q ss_pred HHHHHHHhCCCCCeeEeeccCccccHHHHHHHHHhhhccccccHHHHH
Q 042033 428 ALSYGLRNAGFQVSKYMPFGPVDKIIPYLLRRAEENRGFLSASNLDRQ 475 (490)
Q Consensus 428 ~ls~~L~~~G~~V~kYvPyG~~~e~lpYL~RRa~EN~~~l~~~~~e~~ 475 (490)
++++.|++.||+||||+|||| +|+|||+||++||+ ++++|..+
T Consensus 280 ~l~~~L~~~g~~vr~YvP~G~--~~~~YLvRRl~EN~---an~~f~~r 322 (327)
T 2ekg_A 280 EEQRRLAREGYTVRAYVPYGR--DWYPYLTRRIAERP---ENLLLVLR 322 (327)
T ss_dssp HHHHHHHHTTCEEEEEEEEET--THHHHHHHHHHHC------------
T ss_pred HHHHHHHhCCCCEEEEEEEcc--chHHHHHHHHhHCh---HHHHHHHH
Confidence 999999999999999999999 99999999999999 55555443
No 6
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8.1e-71 Score=631.11 Aligned_cols=359 Identities=22% Similarity=0.280 Sum_probs=299.3
Q ss_pred hHhhcCCHHHHHHHHHhhhh--ccCcchhhhhHHhhhh-hhcCchHHhHHHHHHHHHHhhcceeccCChHHHHHHHHHHH
Q 042033 65 KLFSLLSTTKLIRAAANLHL--AAVEPLVDFGVWVMNS-RLMDIDLAREVVMCTVRHSFYEHFCAGENAPEATDCVRRVN 141 (490)
Q Consensus 65 ~af~~~st~~Llrs~~v~~l--~s~~~lv~~~~~ll~~-~~~~~~~~~~~~~~~~k~Tf~~~FvaGEt~~e~~~~i~~L~ 141 (490)
..++-.+..++.|.+.=+-- ...|+..+.+..+-.. ..+...++..++...|| ++++|||+|||++|+++++++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~r-~~~~qFvaGet~~ea~~~~~~l~ 158 (1026)
T 4f9i_A 80 VFPSLTTSKLLTEHIREYFGNEQDMPAFMSTGAKVAGMLGSFGGAVLNKVLTSNIE-EMARQFIVGETTKEAVKNLEKLR 158 (1026)
T ss_dssp HGGGCCSHHHHHHHHHHHHCCTTTSCTTC---------------CHHHHHHHHHHH-HHHHTTCSCSSHHHHHHHHHHHH
T ss_pred ccCCCCChHHHHHHHHHHhhccCCCCHHHHHHHHhcccccccchHHHHHHHHHHHH-HHhcceeCCCCHHHHHHHHHHHH
Confidence 36666777777776654421 1234444332221110 01222334445566665 78999999999999999999999
Q ss_pred hCCceeecccccccCCChHHHHHHHHHHHHHHHHhhCCC------------------CCCCCeEEEEeCCcCchhHHHHh
Q 042033 142 DAGLRGMLVYAVEHTDDVSECEQNLQGFLQTVQSAKSLP------------------PESASFVIAKISAICPMSLLQRV 203 (490)
Q Consensus 142 ~~Gi~~iLdy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~------------------~~~~~~vsvKlTaLg~~~ll~~~ 203 (490)
+.|++++|||+||++.++++++++.+.|+++|+.++... ....+.||||+|+||+..
T Consensus 159 ~~G~~~~lD~lGE~~~~~~eA~~~~~~y~~~i~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~vSvKlSal~~~~----- 233 (1026)
T 4f9i_A 159 KDGFAAVVDVLGEATLSEEEAEVYTNTYLELLEALKKEQGSWKGLPGKGGDPGLDWGHAPKVNIAVKPTALFCLA----- 233 (1026)
T ss_dssp HTTCEEEEEESCCSCCSHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSSSCTTSBTTTBCSCEEEECGGGSCTTC-----
T ss_pred hCCCEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccCCcceeeehhhhhhhc-----
Confidence 999999999999999999999999999999998865310 001247999999998521
Q ss_pred HHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCch
Q 042033 204 SDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQ 283 (490)
Q Consensus 204 s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q 283 (490)
.+ .+.+..++.+++|+++||++|+++||+|+||||++++|
T Consensus 234 --------------------------------------~~--~~~~~~~~~~~~rl~~i~~~A~~~~v~v~iDaEe~~~~ 273 (1026)
T 4f9i_A 234 --------------------------------------NP--QDFEGSVVAILDRMRRIFKKVMELNGFLCIDMESYRHK 273 (1026)
T ss_dssp --------------------------------------CG--GGHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCGGGH
T ss_pred --------------------------------------ch--hhhhhHHHHHHHHHHHHHHHHHHcCCEEEEcCCCccch
Confidence 11 12335778999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCcCCCCceeeeehhcchhhHHHHHHHHHHHHHcCCCceeEEeccCCCchhhHHHhhcCCCCCCccC
Q 042033 284 PAIDYLTYNAALSNNKAGKPIVYNTIQAYLKDAKERLFLATEAAEKMGVPMGFKLVRGAYMSSESKLAASLGFDSPIHNS 363 (490)
Q Consensus 284 ~aId~~~~~l~~~~N~~~~p~V~~T~QaYLk~s~~~L~~~l~~A~~~g~~~gvKLVRGAY~e~E~~~A~~~G~~~Pi~~t 363 (490)
+++..+...++++|| ++|.||+|||||||||+++|++++++|+++|+++||||||||||++|+++|++.||++|||++
T Consensus 274 ~~tl~l~~~l~~~~~--~~~~vg~v~QaYlkrt~~~l~~l~~~A~~~g~~~~vRLVKGAY~e~E~~~a~~~g~~~pi~~~ 351 (1026)
T 4f9i_A 274 EIILEVFRRLKLEYR--DYPHLGIVLQAYLKDNDKDLDDLLAWAKEHKVQISVRLVKGAYWDYETVKAKQNDWEVPVWTI 351 (1026)
T ss_dssp HHHHHHHHHHHHHTT--TCCCEEEEEETTBTTHHHHHHHHHHHHHHTTCCEEEEEECCSCHHHHHHHHHTTTCCCCBCSS
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEehhhccccHHHHHHHHHHHHHhCCCcceEeccCcCcchhhHHHHhcCCCCCCcCC
Confidence 988888889999886 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCChHHHHHHHhCCCCCeeE
Q 042033 364 IQETHACYNDCASYMLEKIADGSGAVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMAEALSYGLRNAGFQVSKY 443 (490)
Q Consensus 364 k~~Td~~Y~~~~~~ll~~~~~~~~~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~D~ls~~L~~~G~~V~kY 443 (490)
|++||.||++|+++||++. ..++++|||||+.||..+.+++.++|++. ++|||||||||+|++++.|++.||+||||
T Consensus 352 K~~tD~~Y~~~~~~ll~~~--~~~~~~~ATHN~~si~~a~~l~~~~g~~~-~~~eFq~L~GM~d~l~~~L~~~g~~vr~Y 428 (1026)
T 4f9i_A 352 KAESDAAYERQARKILENH--QICHFACASHNIRTISAVMEMARELNVPE-DRYEFQVLYGMAEPVRKGILKVAGRIRLY 428 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TTEEEEEECCCHHHHHHHHHHHHHTTCCG-GGEEEEEETTSCHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHHHHHHhCC--CCcCceEeCCCHHHHHHHHHHHHHcCCCC-CcEEEEcCCCCCHHHHHHHHhcCCCEEEE
Confidence 9999999999999999853 23689999999999999999999999963 48999999999999999999999999999
Q ss_pred eeccCccccHHHHHHHHHhhhccccccHHHHHHH
Q 042033 444 MPFGPVDKIIPYLLRRAEENRGFLSASNLDRQLM 477 (490)
Q Consensus 444 vPyG~~~e~lpYL~RRa~EN~~~l~~~~~e~~ll 477 (490)
+|||++.+|||||+||++||+ ++++|.++.+
T Consensus 429 vP~G~~~~~l~YLvRRl~EN~---an~~F~~~~~ 459 (1026)
T 4f9i_A 429 APYGNMVPGMGYLVRRLLENT---ANESFLRQSF 459 (1026)
T ss_dssp EEESCHHHHHHHHHHHHHHHH---CTTCHHHHHH
T ss_pred EEeccccccHHHHHHHHhhcc---chHHHHHHhh
Confidence 999999999999999999999 8888877753
No 7
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=88.11 E-value=8.9 Score=35.82 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=61.2
Q ss_pred HHHHHHHHHhCCceee-cccccccC-CChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHhHHHhhhh
Q 042033 133 ATDCVRRVNDAGLRGM-LVYAVEHT-DDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRVSDLLRWQ 210 (490)
Q Consensus 133 ~~~~i~~L~~~Gi~~i-Ldy~~E~~-~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~s~~l~~~ 210 (490)
+.+..+.+++.|+... +.....-. .+++..++..+.+.++|+.++..+ .+.|.+ .++..+
T Consensus 48 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG---~~~v~~-~~g~~~-------------- 109 (278)
T 1i60_A 48 LDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG---VKYVVA-VPLVTE-------------- 109 (278)
T ss_dssp HHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT---CCEEEE-ECCBCS--------------
T ss_pred HHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEE-ecCCCC--------------
Confidence 3445566778898865 33222111 244555667778888888877553 235555 333211
Q ss_pred hcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccC
Q 042033 211 QRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTF 281 (490)
Q Consensus 211 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~ 281 (490)
...+ .+..++.+.+.++++|+.|+++||+|.|--....
T Consensus 110 -------------------------------~~~~--~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 110 -------------------------------QKIV--KEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp -------------------------------SCCC--HHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred -------------------------------CCCC--HHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 0111 2346788899999999999999999999776543
No 8
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=84.62 E-value=17 Score=34.45 Aligned_cols=127 Identities=13% Similarity=0.102 Sum_probs=75.0
Q ss_pred ChHHHHHHHHHHHhCCceee-cccccc-----cCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHH
Q 042033 129 NAPEATDCVRRVNDAGLRGM-LVYAVE-----HTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQR 202 (490)
Q Consensus 129 t~~e~~~~i~~L~~~Gi~~i-Ldy~~E-----~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~ 202 (490)
+.+++.+..+.+++.|+... +.+.+. ...+++..++.++.+.++|+.++..+ .+.|.+ .+...
T Consensus 64 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG---~~~v~~--~~~~~------ 132 (295)
T 3cqj_A 64 SREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVG---IRVIQL--AGYDV------ 132 (295)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHT---CCEEEE--CCCSC------
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEE--CCCCC------
Confidence 45666777778888999864 432221 12345555667788888888877654 224433 22110
Q ss_pred hHHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCc
Q 042033 203 VSDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAEDTFV 282 (490)
Q Consensus 203 ~s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~ 282 (490)
| .. ...+..++.+.+.++++|+.|++.||+|.|--....+
T Consensus 133 -----------------~--------------------~~---~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~ 172 (295)
T 3cqj_A 133 -----------------Y--------------------YQ---EANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPL 172 (295)
T ss_dssp -----------------S--------------------SS---CCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSSGG
T ss_pred -----------------C--------------------cC---cCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCCcc
Confidence 0 00 0113467788999999999999999999997766543
Q ss_pred hhHHHHHHHHHHHhcCcCCCCceeeeeh
Q 042033 283 QPAIDYLTYNAALSNNKAGKPIVYNTIQ 310 (490)
Q Consensus 283 q~aId~~~~~l~~~~N~~~~p~V~~T~Q 310 (490)
-.+.+.+. .+....| .|.|+.++-
T Consensus 173 ~~~~~~~~-~l~~~v~---~~~vg~~~D 196 (295)
T 3cqj_A 173 MNSISKAL-GYAHYLN---NPWFQLYPD 196 (295)
T ss_dssp GCSHHHHH-HHHHHHC---CTTEEEECB
T ss_pred cCCHHHHH-HHHHhcC---CCCeEEEec
Confidence 33334333 2333333 345665543
No 9
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=84.20 E-value=12 Score=35.38 Aligned_cols=56 Identities=11% Similarity=0.159 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCchhHHHHHHHHHHHhcCcCCCCceeeee
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQPAIDYLTYNAALSNNKAGKPIVYNTI 309 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q~aId~~~~~l~~~~N~~~~p~V~~T~ 309 (490)
..++.+.+.+.++|+.|+++||.|.|--....+-.+.+.+. .+....+ .|.|+.++
T Consensus 116 ~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~-~l~~~~~---~~~vg~~~ 171 (286)
T 3dx5_A 116 QERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTL-ELLGEVD---HPNLKINL 171 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHH-HHHHHHC---CTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHH-HHHHhcC---CCCeEEEe
Confidence 45788899999999999999999999876554433334333 2333333 34455544
No 10
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=84.08 E-value=15 Score=34.82 Aligned_cols=30 Identities=7% Similarity=0.098 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
..++.+.+.++++|+.|+++||.|.|--..
T Consensus 132 ~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 161 (290)
T 3tva_A 132 PDYSELVRVTQDLLTHAANHGQAVHLETGQ 161 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEecCC
Confidence 357788999999999999999999996654
No 11
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=83.48 E-value=19 Score=33.66 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=58.2
Q ss_pred HHHHHHHHHhCCceee-cccccccCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHhHHHhhhhh
Q 042033 133 ATDCVRRVNDAGLRGM-LVYAVEHTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRVSDLLRWQQ 211 (490)
Q Consensus 133 ~~~~i~~L~~~Gi~~i-Ldy~~E~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~s~~l~~~~ 211 (490)
+.+..+.+++.|+... +.+...-...++..++.++.+.++|+.++..+ .+.|.+ ++++.
T Consensus 49 ~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG---~~~v~~---~~~p~-------------- 108 (281)
T 3u0h_A 49 DAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLG---ARSVTA---FLWPS-------------- 108 (281)
T ss_dssp HHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTT---CCEEEE---ECCSE--------------
T ss_pred HHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcC---CCEEEE---eecCC--------------
Confidence 4555567778898864 33322212233445566777888888887654 224432 22210
Q ss_pred cCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 212 RDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
. .- + ....++.+.+.+.++|+.|+++||.|.|-..
T Consensus 109 -----------------------~-------~~-~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 143 (281)
T 3u0h_A 109 -----------------------M-------DE-E-PVRYISQLARRIRQVAVELLPLGMRVGLEYV 143 (281)
T ss_dssp -----------------------E-------SS-C-HHHHHHHHHHHHHHHHHHHGGGTCEEEEECC
T ss_pred -----------------------C-------CC-c-chhhHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 0 00 0 1246778899999999999999999999755
No 12
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=80.21 E-value=40 Score=31.73 Aligned_cols=100 Identities=7% Similarity=0.040 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhCCceee-cccc--cc-cCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHhHHH
Q 042033 131 PEATDCVRRVNDAGLRGM-LVYA--VE-HTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRVSDL 206 (490)
Q Consensus 131 ~e~~~~i~~L~~~Gi~~i-Ldy~--~E-~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~s~~ 206 (490)
+++.+..+.+++.|+... +... +- ...+++..++.++.+.++|+.++... ...|.+ .++.+..
T Consensus 64 ~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG---a~~v~~-~~g~~~~--------- 130 (287)
T 3kws_A 64 GRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELG---STGVII-VPAFNGQ--------- 130 (287)
T ss_dssp GGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTT---CSEEEE-CSCCTTC---------
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEE-ecCcCCc---------
Confidence 345555666778999874 3221 11 12355556677888888999887654 234444 2333210
Q ss_pred hhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 207 LRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 207 l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
.. .. +..+..++.+.+.++++++.|+++||+|.|-.-
T Consensus 131 ----------------------~~--------~~-----p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 167 (287)
T 3kws_A 131 ----------------------VP--------AL-----PHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPL 167 (287)
T ss_dssp ----------------------CS--------BC-----CSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCC
T ss_pred ----------------------CC--------CC-----CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 00 00 012346788899999999999999999999744
No 13
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=78.51 E-value=48 Score=31.80 Aligned_cols=100 Identities=13% Similarity=0.072 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhCCceee-cccc--c-----ccCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHh
Q 042033 132 EATDCVRRVNDAGLRGM-LVYA--V-----EHTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRV 203 (490)
Q Consensus 132 e~~~~i~~L~~~Gi~~i-Ldy~--~-----E~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~ 203 (490)
++.+.-+.+++.|+... +... + =...+++.-++.++.+.++|+.++..+ .+.|.+ ..|....
T Consensus 71 ~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG---a~~v~~---~~g~~~~---- 140 (316)
T 3qxb_A 71 RAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAME---VPATGM---PFGSYSA---- 140 (316)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTT---CCEEEE---CCBBCCH----
T ss_pred HHHHHHHHHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEe---cCCCcCc----
Confidence 45566667888999864 2111 0 112345556677888889999888664 234432 2221000
Q ss_pred HHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCc-EEEcC
Q 042033 204 SDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVP-LTVDA 277 (490)
Q Consensus 204 s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~-v~IDA 277 (490)
.. +. .+ ...+..++.+.+.++++|+.|++.||. |.|-.
T Consensus 141 ~~-----------------------------~~-----~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~ 179 (316)
T 3qxb_A 141 AD-----------------------------AL-----NP--ARREEIYAIARDMWIELAAYAKRQGLSMLYVEP 179 (316)
T ss_dssp HH-----------------------------HT-----CH--HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred cc-----------------------------cC-----Cc--ccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 00 00 00 112346788999999999999999999 99876
No 14
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=75.62 E-value=31 Score=32.23 Aligned_cols=28 Identities=4% Similarity=0.049 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcC
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDA 277 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDA 277 (490)
..++.+.+.++++|+.|++.||.|.|-.
T Consensus 124 ~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 124 ACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 4677889999999999999999999874
No 15
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=74.05 E-value=32 Score=32.39 Aligned_cols=56 Identities=5% Similarity=-0.057 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCCccCchhHHHHHHHHHHHhcCcCCCCceeeee
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAEDTFVQPAIDYLTYNAALSNNKAGKPIVYNTI 309 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~~q~aId~~~~~l~~~~N~~~~p~V~~T~ 309 (490)
..++.+.+.++++|+.|+++||+|.|--....+-.+.+.+. .+....+ .|.|+.++
T Consensus 134 ~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~-~l~~~~~---~~~vg~~~ 189 (301)
T 3cny_A 134 KEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETD-RLMANTD---PKLVGLLY 189 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHH-HHHHTSC---TTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHH-HHHHhCC---ccceeEEe
Confidence 46788899999999999999999999765443322333333 2333333 35455544
No 16
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=73.33 E-value=48 Score=30.45 Aligned_cols=30 Identities=10% Similarity=-0.008 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
+..++.+.+.++++++.|+++||+|.|--.
T Consensus 116 ~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~ 145 (260)
T 1k77_A 116 ERYRAVFIDNIRYAADRFAPHGKRILVEAL 145 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 346788899999999999999999999665
No 17
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.65 E-value=16 Score=35.44 Aligned_cols=29 Identities=3% Similarity=0.053 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
..++.+.++++++++.|+++||.|.|--.
T Consensus 143 ~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 171 (305)
T 3obe_A 143 DDAKVVSEIFNRAGEITKKAGILWGYHNH 171 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 46778899999999999999999998543
No 18
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=68.25 E-value=33 Score=31.77 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhCCceee-cccccc-cCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHhHHHhhh
Q 042033 132 EATDCVRRVNDAGLRGM-LVYAVE-HTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRVSDLLRW 209 (490)
Q Consensus 132 e~~~~i~~L~~~Gi~~i-Ldy~~E-~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~s~~l~~ 209 (490)
++.+..+.+++.|+... +....- ...+++..++.++.+.++|+.++..+. +.|.+= ++-.++
T Consensus 46 ~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~---~~v~~~-~g~~~~------------ 109 (275)
T 3qc0_A 46 GLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGA---DCLVLV-AGGLPG------------ 109 (275)
T ss_dssp CHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTC---SCEEEE-CBCCCT------------
T ss_pred CHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCC---CEEEEe-eCCCCC------------
Confidence 34555566677888754 221110 123455566677888888888876542 344442 111000
Q ss_pred hhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 210 QQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 210 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
... ..+..++.+.+.++++++.|+++||+|.|--.
T Consensus 110 --------------------------------~~~--~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~ 144 (275)
T 3qc0_A 110 --------------------------------GSK--NIDAARRMVVEGIAAVLPHARAAGVPLAIEPL 144 (275)
T ss_dssp --------------------------------TCC--CHHHHHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred --------------------------------CCc--CHHHHHHHHHHHHHHHHHHHHHcCCEEEEeEC
Confidence 001 12346788899999999999999999999853
No 19
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=67.13 E-value=83 Score=29.43 Aligned_cols=105 Identities=8% Similarity=0.155 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHHHhCCceeecccccc-----cCCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHh
Q 042033 129 NAPEATDCVRRVNDAGLRGMLVYAVE-----HTDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRV 203 (490)
Q Consensus 129 t~~e~~~~i~~L~~~Gi~~iLdy~~E-----~~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~ 203 (490)
+.+++.+..+.+++.|+....-++.. ...+++..++..+.+.++|+.++..+. ..|.+ .+++.
T Consensus 45 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~---~~v~~---~~~~~------ 112 (294)
T 3vni_A 45 SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDV---HLIGG---ALYSY------ 112 (294)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTC---CEEEE---STTSC------
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCC---Ceeec---cccCC------
Confidence 45667777778888999865422111 123455556677888888888775532 24332 11110
Q ss_pred HHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 204 SDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 204 s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
| + ..+. ... ..+..++.+.+.+.++|+.|+++||+|.|--..
T Consensus 113 ----------------~-----~------~~~~-----~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~ 154 (294)
T 3vni_A 113 ----------------W-----P------IDYT-----KTI--DKKGDWERSVESVREVAKVAEACGVDFCLEVLN 154 (294)
T ss_dssp ----------------S-----S------CCTT-----SCC--CHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ----------------C-----C------CcCC-----CCC--CHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 0 0 0000 011 123567889999999999999999999998653
No 20
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=66.57 E-value=28 Score=35.61 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
++.++.+.+.|++|+..|.++||++.|-..+.
T Consensus 192 e~~w~~l~~~L~~i~~~Aee~GV~Laiep~dp 223 (386)
T 3bdk_A 192 EDLWANLEYFIKAILPTAEEAGVKMAIHPDDP 223 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCEEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCc
Confidence 45788999999999999999999999976643
No 21
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=57.34 E-value=1.3e+02 Score=28.45 Aligned_cols=101 Identities=8% Similarity=0.045 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhCCceeec--ccc-cccC--CChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeC-CcCchhHHHHhH
Q 042033 131 PEATDCVRRVNDAGLRGML--VYA-VEHT--DDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKIS-AICPMSLLQRVS 204 (490)
Q Consensus 131 ~e~~~~i~~L~~~Gi~~iL--dy~-~E~~--~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlT-aLg~~~ll~~~s 204 (490)
+++.+..+.+.+.|+.... .+. .-.- .+++..++..+.+.++|+.++..+ .+.|.+-.. ..|.
T Consensus 66 ~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG---~~~v~~~~~~~~g~-------- 134 (309)
T 2hk0_A 66 AELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLD---IHTIGGALHSYWPI-------- 134 (309)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTT---CCEEEECTTSCSSC--------
T ss_pred hhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEeeccccccc--------
Confidence 4566666778889998764 111 0111 234555667788888888887654 224432100 0010
Q ss_pred HHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 205 DLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
+ +... ...+..++.+.+.++++|+.|+++||.|.|---
T Consensus 135 ------------------------------~-----~~~~-~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 172 (309)
T 2hk0_A 135 ------------------------------D-----YSQP-VDKAGDYARGVEGINGIADFANDLGINLCIEVL 172 (309)
T ss_dssp ------------------------------C-----TTSC-CCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ------------------------------c-----CCCc-CChHHHHHHHHHHHHHHHHHHHHcCCEEEEeec
Confidence 0 0000 012356788999999999999999999999765
No 22
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=51.07 E-value=82 Score=31.57 Aligned_cols=30 Identities=3% Similarity=0.149 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC--CcEEEcCC
Q 042033 249 ENELQSAHQRLQKLCQECLEAN--VPLTVDAE 278 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~g--v~v~IDAE 278 (490)
+..++.+.+.++++|+.|+++| |+|.|-..
T Consensus 151 ~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~ 182 (394)
T 1xla_A 151 AAALDRMREGVDTAAGYIKDKGYNLRIALEPK 182 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 3567889999999999999999 99998765
No 23
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=49.85 E-value=99 Score=29.54 Aligned_cols=27 Identities=4% Similarity=0.054 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCc--EEEc
Q 042033 250 NELQSAHQRLQKLCQECLEANVP--LTVD 276 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~--v~ID 276 (490)
..++.+.++++++|+.|+++||+ |.+-
T Consensus 137 ~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 137 DEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 46788899999999999999999 9874
No 24
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=48.61 E-value=1.8e+02 Score=28.70 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=27.8
Q ss_pred HhhcceeccCChHHHHHHHHHHHhCCceeecccccccCC
Q 042033 119 SFYEHFCAGENAPEATDCVRRVNDAGLRGMLVYAVEHTD 157 (490)
Q Consensus 119 Tf~~~FvaGEt~~e~~~~i~~L~~~Gi~~iLdy~~E~~~ 157 (490)
+||.+| -+.+++++.++++-+.|-. ++|..+|...
T Consensus 40 SFsd~~---~~~~~al~~A~~~v~~GAd-IIDIGgeSTr 74 (314)
T 3tr9_A 40 SFYHPH---LDLNSALRTAEKMVDEGAD-ILDIGGEATN 74 (314)
T ss_dssp CSBCBC---CSHHHHHHHHHHHHHTTCS-EEEEECCCSC
T ss_pred chhhcc---CCHHHHHHHHHHHHHCCCC-EEEECCCCCC
Confidence 677744 3789999999999999865 7888888653
No 25
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=41.69 E-value=1.7e+02 Score=28.08 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
+..++.+.+.++++++.|+++||+|.|--.
T Consensus 156 ~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 185 (335)
T 2qw5_A 156 KVRYANAQPILDKLGEYAEIKKVKLAIEPI 185 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEEeeC
Confidence 457788999999999999999999999664
No 26
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=40.13 E-value=2.1e+02 Score=25.90 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
..++.+.+.++++++.|+++||.|.|---.
T Consensus 110 ~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~ 139 (254)
T 3ayv_A 110 ERALPLAEALGLVVRRARTLGVRLLLENSH 139 (254)
T ss_dssp HTHHHHHHHTHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEcCCC
Confidence 457788999999999999999999986554
No 27
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=40.08 E-value=2.2e+02 Score=26.13 Aligned_cols=29 Identities=3% Similarity=0.109 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 250 NELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
..++.+.+.++++|+.|+++||.|.|---
T Consensus 126 ~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 154 (290)
T 2qul_A 126 PYVDRAIESVRRVIKVAEDYGIIYALEVV 154 (290)
T ss_dssp HHHHHHHHHHHTTHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 46778899999999999999999999754
No 28
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=34.01 E-value=70 Score=30.38 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEcCCccC---c-hhHHHHHHHHHHHhcC
Q 042033 254 SAHQRLQKLCQECLEANVPLTVDAEDTF---V-QPAIDYLTYNAALSNN 298 (490)
Q Consensus 254 ~~~~rl~~i~~~A~~~gv~v~IDAE~s~---~-q~aId~~~~~l~~~~N 298 (490)
..+++++++++.|.++|+.|+||..... + +...+.+ ..++.+|-
T Consensus 76 ~~~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~~~~~~~-~~~a~r~~ 123 (293)
T 1tvn_A 76 GNMSRLDTVVNAAIAEDMYVIIDFHSHEAHTDQATAVRFF-EDVATKYG 123 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECSCGGGCHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCCCccccHHHHHHHH-HHHHHHhC
Confidence 3578999999999999999999987542 3 3344544 45677774
No 29
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=34.01 E-value=2.8e+02 Score=25.40 Aligned_cols=96 Identities=10% Similarity=0.116 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHhCCcee---ec--cccccc-CCChHHHHHHHHHHHHHHHHhhCCCCCCCCeEEEEeCCcCchhHHHHh
Q 042033 130 APEATDCVRRVNDAGLRG---ML--VYAVEH-TDDVSECEQNLQGFLQTVQSAKSLPPESASFVIAKISAICPMSLLQRV 203 (490)
Q Consensus 130 ~~e~~~~i~~L~~~Gi~~---iL--dy~~E~-~~~~~~~d~~~~~~l~~I~~~~~~~~~~~~~vsvKlTaLg~~~ll~~~ 203 (490)
.+++.+..+.+++.|+.. +. .|...- ..+++..++.++.+.++|+.++... .+.|.+= ++-..
T Consensus 46 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lG---a~~v~~~-~g~~~------- 114 (285)
T 1qtw_A 46 TQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG---LSLLNFH-PGSHL------- 114 (285)
T ss_dssp HHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTT---CCEEEEC-CCBCT-------
T ss_pred HHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcC---CCEEEEC-cCCCC-------
Confidence 356666667788899873 22 122111 2345556677888888898887654 2344431 11100
Q ss_pred HHHhhhhhcCCCCCCCcccCCCCCccCCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Q 042033 204 SDLLRWQQRDPSFNLPWKLNNFPLFSDCSPLYHTLQKPEPLTLQEENELQSAHQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 204 s~~l~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~L~~~e~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
...+ .+..++.+.+.+++++ |++.||+|.|-..
T Consensus 115 --------------------------------------~~~~--~~~~~~~~~~~l~~l~--a~~~gv~l~lEn~ 147 (285)
T 1qtw_A 115 --------------------------------------MQIS--EEDCLARIAESINIAL--DKTQGVTAVIENT 147 (285)
T ss_dssp --------------------------------------TTSC--HHHHHHHHHHHHHHHH--HHCSSCEEEEECC
T ss_pred --------------------------------------CCCC--HHHHHHHHHHHHHHHH--hccCCCEEEEecC
Confidence 0001 2346677888999987 4578999998765
No 30
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=33.64 E-value=1.7e+02 Score=29.02 Aligned_cols=30 Identities=7% Similarity=0.190 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC--CcEEEcCC
Q 042033 249 ENELQSAHQRLQKLCQECLEAN--VPLTVDAE 278 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~g--v~v~IDAE 278 (490)
+..++.+.+.++++|+.|+++| |+|.|-..
T Consensus 151 ~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~ 182 (386)
T 1muw_A 151 RVALDRMKEAFDLLGEYVTSQGYDIRFAIEPK 182 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 3567889999999999999999 99988765
No 31
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=32.16 E-value=62 Score=35.82 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=28.8
Q ss_pred HhhcceeccCChHHHHHHHHHHHhCCceee-cccccc
Q 042033 119 SFYEHFCAGENAPEATDCVRRVNDAGLRGM-LVYAVE 154 (490)
Q Consensus 119 Tf~~~FvaGEt~~e~~~~i~~L~~~Gi~~i-Ldy~~E 154 (490)
|.--||..|-|..++.+.+..|++.||..+ |.-.-|
T Consensus 5 TYrlq~~~gGtf~gi~~~LdYLk~LGVtaIwLsPi~~ 41 (720)
T 1iv8_A 5 TYRLQLNKNFNFGDVIDNLWYFXDLGVSHLYLSPVLM 41 (720)
T ss_dssp EEEECCBTTBCHHHHHHTHHHHHHHTCCEEEECCCEE
T ss_pred EEeccCCCCCCHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 445589989999999999999999999987 444444
No 32
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=31.51 E-value=94 Score=29.67 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
+..++.+.+.++++|+.|+++||+|.|--...
T Consensus 152 ~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 183 (340)
T 2zds_A 152 ERGYQDFADRWNPILDVFDAEGVRFAHEVHPS 183 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 45678899999999999999999999977543
No 33
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=31.23 E-value=76 Score=30.01 Aligned_cols=45 Identities=2% Similarity=0.020 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEcCCccC---chhHHHHHHHHHHHhcC
Q 042033 254 SAHQRLQKLCQECLEANVPLTVDAEDTF---VQPAIDYLTYNAALSNN 298 (490)
Q Consensus 254 ~~~~rl~~i~~~A~~~gv~v~IDAE~s~---~q~aId~~~~~l~~~~N 298 (490)
..+++++++++.|.++|+.|+||..... .+.....+...++.+|-
T Consensus 74 ~~~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~~~~~~~~~ia~r~~ 121 (291)
T 1egz_A 74 GNKAKVERVVDAAIANDMYAIIGWHSHSAENNRSEAIRFFQEMARKYG 121 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECSCGGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCCCcchhHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999986532 33333334445677773
No 34
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=30.83 E-value=1.5e+02 Score=29.63 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCcEEEcCC
Q 042033 250 NELQSAHQRLQKLCQECLEA--NVPLTVDAE 278 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~--gv~v~IDAE 278 (490)
..++.+.+.++++|+.|+++ ||++.|---
T Consensus 152 ~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~ 182 (393)
T 1xim_A 152 AALDRYREALNLLAQYSEDRGYGLRFAIEPK 182 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 46788899999999999998 899998765
No 35
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=30.22 E-value=92 Score=33.48 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=24.7
Q ss_pred ceeccCChHHHHHHHHHHHh-CCceee-cccccc
Q 042033 123 HFCAGENAPEATDCVRRVND-AGLRGM-LVYAVE 154 (490)
Q Consensus 123 ~FvaGEt~~e~~~~i~~L~~-~Gi~~i-Ldy~~E 154 (490)
.|++| |...+++.+..|++ .||..+ |--.-|
T Consensus 184 ~f~gG-~~~gi~~~LdyLk~~LGvt~I~L~Pi~~ 216 (637)
T 1ji1_A 184 VFFGG-DLAGIDQKLGYIKKTLGANILYLNPIFK 216 (637)
T ss_dssp EECCC-CHHHHHHTHHHHHTTTCCCEEEESCCEE
T ss_pred cccCc-CHHHHHHhHHHHHhccCCCEEEECCCcc
Confidence 46666 89999999999999 999987 554444
No 36
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=29.32 E-value=1e+02 Score=30.42 Aligned_cols=31 Identities=19% Similarity=0.435 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
+..++.+.+.++++++.|+++||+|.|-...
T Consensus 190 ~~~~~~~~~~l~~l~~~A~~~Gv~l~lE~~~ 220 (367)
T 1tz9_A 190 EDLVENLRYFLERVIPVCEEENIKMGIHPDD 220 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEECC
Confidence 3467889999999999999999999997763
No 37
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=29.21 E-value=3.6e+02 Score=27.77 Aligned_cols=95 Identities=11% Similarity=0.127 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEcC---CccCchhHHHHH--HHHHHHhcCcCCCCceeeeehhcchhhHHHHHHH
Q 042033 249 ENELQSAHQRLQKLCQECLEANVPLTVDA---EDTFVQPAIDYL--TYNAALSNNKAGKPIVYNTIQAYLKDAKERLFLA 323 (490)
Q Consensus 249 ~~~~~~~~~rl~~i~~~A~~~gv~v~IDA---E~s~~q~aId~~--~~~l~~~~N~~~~p~V~~T~QaYLk~s~~~L~~~ 323 (490)
+..++.+.+.|.+||+.|. .||++.|.- |-..+.-.++.+ ...+.++++ |.|+.++=.+=--....+...
T Consensus 193 ~~a~~rl~esL~ei~~~A~-~gv~l~LE~Kp~Ep~~~~~~~~d~~~~l~li~~vg----~~vgv~LDtgH~~~ge~i~~~ 267 (438)
T 3m0m_A 193 TRAFERYLSAMAEIYKGLP-DDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLG----PKAQCLVDLGHHAPNTNIEMI 267 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCC-TTCEEEEECCSSSSCSSEETTCSHHHHHHHHHHHC----TTEEEEEETTSSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhh-cCCEEEEccCCCcCCcceecchhHHHHHHHHHHhC----CCEEEEEECCCCCCCCCHHHH
Confidence 4567888999999999885 489988874 322111001111 223344443 556666655544334455666
Q ss_pred HHHHHHcCCCceeEEeccCCCchhh
Q 042033 324 TEAAEKMGVPMGFKLVRGAYMSSES 348 (490)
Q Consensus 324 l~~A~~~g~~~gvKLVRGAY~e~E~ 348 (490)
++.+...|.-+.+=+..|-||+..-
T Consensus 268 ia~~~~~gkL~hvHvnD~~r~D~D~ 292 (438)
T 3m0m_A 268 VARLIQFGKLGGFHFNDSKYGDDDL 292 (438)
T ss_dssp HHHHHHTTCEEEEEECBCSSSSCCB
T ss_pred HHHHHhcCCEEEEEcCCCCCCCCCc
Confidence 6666666777789999999986654
No 38
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=28.09 E-value=3.2e+02 Score=24.90 Aligned_cols=26 Identities=12% Similarity=0.028 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHH-hcCCcEEEcCC
Q 042033 253 QSAHQRLQKLCQECL-EANVPLTVDAE 278 (490)
Q Consensus 253 ~~~~~rl~~i~~~A~-~~gv~v~IDAE 278 (490)
+.+.+.++++++.|+ +.||.|.|.--
T Consensus 115 ~~~~~~l~~l~~~a~~~~gv~l~lEn~ 141 (270)
T 3aam_A 115 ERVKEGALKALRLAGVRSRPVLLVENT 141 (270)
T ss_dssp HHHHHHHHHHHHHHTCCSSSEEEEECC
T ss_pred HHHHHHHHHHHHhhcccCCCEEEEecC
Confidence 467889999999998 89999998765
No 39
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=27.85 E-value=1.9e+02 Score=28.69 Aligned_cols=20 Identities=20% Similarity=0.162 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhcCCcEEE
Q 042033 256 HQRLQKLCQECLEANVPLTV 275 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~I 275 (490)
+....++++.|+++|+.+++
T Consensus 279 i~~~~~i~~~A~~~gi~~~~ 298 (371)
T 2ovl_A 279 YTTFRKVAALAEANNMLLTS 298 (371)
T ss_dssp HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEcc
Confidence 35567899999999999999
No 40
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=27.75 E-value=3.8e+02 Score=27.45 Aligned_cols=86 Identities=12% Similarity=-0.023 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--cEEEcCC---c--cCchhHHHHHHHHHHHhcCcCCCCc-eee---eehhcchhhHH
Q 042033 250 NELQSAHQRLQKLCQECLEANV--PLTVDAE---D--TFVQPAIDYLTYNAALSNNKAGKPI-VYN---TIQAYLKDAKE 318 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv--~v~IDAE---~--s~~q~aId~~~~~l~~~~N~~~~p~-V~~---T~QaYLk~s~~ 318 (490)
..++.+.+.|+.+++.|++.|+ .|.|-.- . +.+-.+++... .+..+.+ .|. |+. |+-+++- ..
T Consensus 203 ~~~~~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al-~li~~vg---~pn~vgv~lDt~H~~~~--g~ 276 (438)
T 1a0c_A 203 FELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVL-AFLRKYD---LDKYFKVNIEANHATLA--FH 276 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHH-HHHHHTT---CTTTEEEEEEHHHHHHT--TC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHH-HHHHHcC---CCCeEEEEEEhhhhhhc--CC
Confidence 4678899999999999999986 7777642 1 12222333232 2233443 343 555 4444332 22
Q ss_pred HHHHHHHHHHHcCCCceeEEecc
Q 042033 319 RLFLATEAAEKMGVPMGFKLVRG 341 (490)
Q Consensus 319 ~L~~~l~~A~~~g~~~gvKLVRG 341 (490)
++...++.+...+.-..|=+-.+
T Consensus 277 di~~~i~~~~~~~~L~hvHlnD~ 299 (438)
T 1a0c_A 277 DFQHELRYARINGVLGSIDANTG 299 (438)
T ss_dssp CHHHHHHHHHHTTCEEEEECCBC
T ss_pred CHHHHHHHhcCCCcEEEEECCCC
Confidence 45555555544455445554443
No 41
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=27.06 E-value=1.2e+02 Score=30.06 Aligned_cols=27 Identities=22% Similarity=0.317 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCccC
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDTF 281 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s~ 281 (490)
-+++++++++.|.++|+.|+||.-+..
T Consensus 82 ~l~~ld~vV~~a~~~Gi~vIlDlH~~~ 108 (340)
T 3qr3_A 82 SISKYDQLVQGCLSLGAYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 378999999999999999999998653
No 42
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=26.40 E-value=69 Score=24.88 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEcCCccC-chhHHHHHHHHHH
Q 042033 251 ELQSAHQRLQKLCQECLEANVPLTVDAEDTF-VQPAIDYLTYNAA 294 (490)
Q Consensus 251 ~~~~~~~rl~~i~~~A~~~gv~v~IDAE~s~-~q~aId~~~~~l~ 294 (490)
+++.++..+.+-...|-.++|.++|.||... ...-++.++..++
T Consensus 30 eleralqelekalaragarnvqitisaendeqakelleliarllq 74 (96)
T 2jvf_A 30 ELERALQELEKALARAGARNVQITISAENDEQAKELLELIARLLQ 74 (96)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccceEEEEEecChHHHHHHHHHHHHHHH
Confidence 4566777888888889999999999999764 2334444444433
No 43
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=26.31 E-value=3.8e+02 Score=26.40 Aligned_cols=26 Identities=4% Similarity=0.095 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhcCCcEEEc-CCccC
Q 042033 256 HQRLQKLCQECLEANVPLTVD-AEDTF 281 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~ID-AE~s~ 281 (490)
+....++++.|+++|+.+++- |=++.
T Consensus 274 it~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 274 LSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred HHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 345678999999999999998 44443
No 44
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=26.03 E-value=1.2e+02 Score=29.00 Aligned_cols=44 Identities=9% Similarity=-0.078 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCccCc--------hhHHHHHHHHHHHhcC
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDTFV--------QPAIDYLTYNAALSNN 298 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s~~--------q~aId~~~~~l~~~~N 298 (490)
.+++++++++.|.++|+.|+||..+..- +.....+...++.+|-
T Consensus 70 ~l~~~~~~v~~~~~~gi~vild~h~~~~~~g~~~~~~~~~~~~~~~ia~~~~ 121 (305)
T 1h1n_A 70 YLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFETFWKTVASQFA 121 (305)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCTTEETTEECCCHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHCCCEEEEeccccccccCCcCCcHHHHHHHHHHHHHHhC
Confidence 4688999999999999999999886421 2222334445677774
No 45
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=25.45 E-value=99 Score=29.58 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCccC-------chhHHHHHHHHHHHhcC
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDTF-------VQPAIDYLTYNAALSNN 298 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s~-------~q~aId~~~~~l~~~~N 298 (490)
.+++++++++.|.++|+.|+||.-... .+...+.+ ..++.+|-
T Consensus 78 ~l~~ld~~v~~a~~~Gl~vild~h~~~~g~~~~~~~~~~~~~-~~ia~~y~ 127 (306)
T 2cks_A 78 FTDRMHQLIDMATARGLYVIVDWHILTPGDPHYNLDRAKTFF-AEIAQRHA 127 (306)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCSSCCGGGGHHHHHHHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecCCCCCCcccCHHHHHHHH-HHHHHHhC
Confidence 468899999999999999999986541 22234433 46677774
No 46
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=23.69 E-value=3.5e+02 Score=26.87 Aligned_cols=21 Identities=5% Similarity=-0.073 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEc
Q 042033 256 HQRLQKLCQECLEANVPLTVD 276 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~ID 276 (490)
+....+|++.|+++|+.+++-
T Consensus 282 it~~~~ia~~A~~~gi~~~~~ 302 (383)
T 3i4k_A 282 LLESKKIAAIAEAGGLACHGA 302 (383)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHcCCeEEeC
Confidence 456788999999999999884
No 47
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=23.08 E-value=1.4e+02 Score=29.27 Aligned_cols=22 Identities=5% Similarity=0.077 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhcCCcEEEcC
Q 042033 256 HQRLQKLCQECLEANVPLTVDA 277 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDA 277 (490)
+....++++.|+++|+.+++-.
T Consensus 277 i~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 277 VTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHHHHHHcCCeEeecc
Confidence 4567889999999999999874
No 48
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=22.95 E-value=1.5e+02 Score=29.41 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
.+++++++++.|.++|+.|+||..+.
T Consensus 89 ~l~~ld~vVd~a~~~Gi~vIldlH~~ 114 (353)
T 3l55_A 89 WMMRVKAIVEYAMNAGLYAIVNVHHD 114 (353)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47899999999999999999999875
No 49
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=22.74 E-value=4.8e+02 Score=25.68 Aligned_cols=28 Identities=11% Similarity=0.265 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCc---EEEcC
Q 042033 250 NELQSAHQRLQKLCQECLEANVP---LTVDA 277 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~gv~---v~IDA 277 (490)
.....+.+-+.+..+.|.+.|+. |.||-
T Consensus 188 dv~~ev~~~l~~~i~~a~~aGI~~~~IilDP 218 (318)
T 2vp8_A 188 GVVDAVISQVTAAAERAVAAGVAREKVLIDP 218 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEET
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 34566778889999999999994 99995
No 50
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=22.25 E-value=95 Score=30.95 Aligned_cols=23 Identities=9% Similarity=-0.084 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEcCC
Q 042033 256 HQRLQKLCQECLEANVPLTVDAE 278 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDAE 278 (490)
+....++++.|+++|+.+++=+=
T Consensus 289 it~~~~i~~~A~~~g~~~~~~~~ 311 (382)
T 1rvk_A 289 ITPALKTMHLAEAFGMECEVHGN 311 (382)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHHHcCCeEeecCC
Confidence 35567899999999999999843
No 51
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=22.23 E-value=2.2e+02 Score=28.23 Aligned_cols=29 Identities=3% Similarity=0.078 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCcEEEcCC
Q 042033 250 NELQSAHQRLQKLCQECLEA--NVPLTVDAE 278 (490)
Q Consensus 250 ~~~~~~~~rl~~i~~~A~~~--gv~v~IDAE 278 (490)
..++.+.+.++++|+.|+++ ||++.|--.
T Consensus 152 ~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~ 182 (387)
T 1bxb_A 152 KVWDWVREALNFMAAYAEDQGYGYRFALEPK 182 (387)
T ss_dssp THHHHHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 35678899999999999999 899998764
No 52
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=22.06 E-value=2e+02 Score=28.68 Aligned_cols=25 Identities=4% Similarity=0.092 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 256 HQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
+....++++.|+++|+.+++-.=++
T Consensus 282 it~~~~i~~~A~~~gi~~~~~~~~~ 306 (391)
T 2qgy_A 282 LIDIIEISNEASNNGIFISPHCWNS 306 (391)
T ss_dssp HHHHHHHHHHHHHTTCEECCBCCSC
T ss_pred HHHHHHHHHHHHHCCCEEeccCCCC
Confidence 3456789999999999998874333
No 53
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=21.74 E-value=2.6e+02 Score=27.74 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEcC
Q 042033 256 HQRLQKLCQECLEANVPLTVDA 277 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDA 277 (490)
+....++++.|+++|+.+++-.
T Consensus 278 it~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 278 IQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCeEeecc
Confidence 4567789999999999999974
No 54
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=21.74 E-value=1.2e+02 Score=29.12 Aligned_cols=43 Identities=7% Similarity=0.173 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCccC-------chhHHHHHHHHHHHhcC
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDTF-------VQPAIDYLTYNAALSNN 298 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s~-------~q~aId~~~~~l~~~~N 298 (490)
.+++++++++.|.++|+.|+||.-... .+.+++.+. .++.+|-
T Consensus 78 ~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~w~-~ia~r~~ 127 (303)
T 7a3h_A 78 VKEKVKEAVEAAIDLDIYVIIDWHILSDNDPNIYKEEAKDFFD-EMSELYG 127 (303)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEECSSSCSTTTTHHHHHHHHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecccCCCCchHHHHHHHHHHH-HHHHHhC
Confidence 368899999999999999999987532 234555554 5667774
No 55
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=21.56 E-value=1.9e+02 Score=28.32 Aligned_cols=26 Identities=4% Similarity=0.244 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
.+++++++++.|.++|+.|+||..+.
T Consensus 81 ~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 81 WMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp HHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 47899999999999999999999875
No 56
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=21.56 E-value=2.3e+02 Score=27.83 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=43.8
Q ss_pred HhCCCC-cEEEeCCChHHHHHHHHHHHHhCCCCCCceEEeecccCC-----hHHHHHHHhCCCCCeeEeeccC
Q 042033 382 IADGSG-AVVLATHNVESGQLAAAKATDLGIKGDQKLEFAQLYGMA-----EALSYGLRNAGFQVSKYMPFGP 448 (490)
Q Consensus 382 ~~~~~~-~~~vATHN~~si~~a~~~~~~~gi~~~~~veF~qL~GM~-----D~ls~~L~~~G~~V~kYvPyG~ 448 (490)
...|.+ ++.|..|+...++.+.+.+.+.|++ ....|.-|.+- +++.....+.|..|.-|-|+|.
T Consensus 178 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~---~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~ 247 (353)
T 3erp_A 178 VRHGKALYVGISNYPADLARQAIDILEDLGTP---CLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAG 247 (353)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHHHHHHHTCC---EEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGG
T ss_pred HHCCCccEEEecCCCHHHHHHHHHHHHHcCCC---eEEeeccccccccchhhHHHHHHHHcCCeEEEeccccc
Confidence 345554 7999999999999888888777754 22333333332 3456666778988888888873
No 57
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=21.40 E-value=1.7e+02 Score=28.74 Aligned_cols=26 Identities=12% Similarity=-0.005 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 254 SAHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 254 ~~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
..+++++++++.|.++|+.|+||...
T Consensus 118 ~~l~~ld~~v~~a~~~Gi~Vild~H~ 143 (359)
T 4hty_A 118 GYLELLDQVVAWNNELGIYTILDWHS 143 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999999999999765
No 58
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=20.94 E-value=90 Score=29.99 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 256 HQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
+++++++++.|.++|+.|++|.-.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 578899999999999999999853
No 59
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=20.93 E-value=1.8e+02 Score=30.24 Aligned_cols=26 Identities=4% Similarity=0.244 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCcc
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAEDT 280 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~s 280 (490)
.+++++++++.|.++|+.|+||..+.
T Consensus 84 ~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 84 WMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 47899999999999999999999864
No 60
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.32 E-value=77 Score=29.51 Aligned_cols=25 Identities=8% Similarity=-0.005 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
.+++++.+++.|.++|+.|++|.-.
T Consensus 88 ~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 88 MLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3678999999999999999998643
No 61
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=20.22 E-value=2.4e+02 Score=28.15 Aligned_cols=27 Identities=15% Similarity=0.081 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhcCCcEEEc-CCccCc
Q 042033 256 HQRLQKLCQECLEANVPLTVD-AEDTFV 282 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~ID-AE~s~~ 282 (490)
+....++++.|+++|+.+++- |=++.+
T Consensus 277 it~~~~i~~~A~~~g~~~~~~~~~es~i 304 (397)
T 2qde_A 277 LLKAQRWLTLARLANLPVICGCMVGSGL 304 (397)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCSCCHH
T ss_pred HHHHHHHHHHHHHcCCeEEEecCcccHH
Confidence 456788999999999999998 544543
No 62
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=20.12 E-value=1.8e+02 Score=28.17 Aligned_cols=25 Identities=12% Similarity=0.178 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEcCCc
Q 042033 255 AHQRLQKLCQECLEANVPLTVDAED 279 (490)
Q Consensus 255 ~~~rl~~i~~~A~~~gv~v~IDAE~ 279 (490)
.+++++++++.|.++|+.|+||.-.
T Consensus 93 ~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 93 SLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3688999999999999999999853
No 63
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.10 E-value=53 Score=33.60 Aligned_cols=22 Identities=23% Similarity=0.469 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhcCCcEEEcC
Q 042033 256 HQRLQKLCQECLEANVPLTVDA 277 (490)
Q Consensus 256 ~~rl~~i~~~A~~~gv~v~IDA 277 (490)
.+-+++++++|+++|++|++|.
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 3558889999999999999995
Done!