Query 042034
Match_columns 449
No_of_seqs 151 out of 940
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 13:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042034.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042034hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1299 Vacuolar sorting prote 100.0 2.3E-80 5E-85 595.7 39.1 439 1-449 1-440 (549)
2 PF00995 Sec1: Sec1 family; I 100.0 6.1E-77 1.3E-81 631.4 32.3 412 21-442 1-421 (564)
3 KOG1302 Vacuolar sorting prote 100.0 2.2E-75 4.8E-80 582.3 34.9 424 3-440 17-454 (600)
4 COG5158 SEC1 Proteins involved 100.0 6.6E-74 1.4E-78 581.2 40.1 427 1-439 2-437 (582)
5 KOG1300 Vesicle trafficking pr 100.0 1.2E-71 2.6E-76 553.6 39.3 429 1-439 1-448 (593)
6 KOG1301 Vesicle trafficking pr 100.0 9E-69 1.9E-73 521.8 33.8 426 2-436 11-473 (621)
7 PF14071 YlbD_coat: Putative c 45.8 16 0.00035 30.5 2.2 14 271-285 32-45 (124)
8 CHL00123 rps6 ribosomal protei 25.8 2.1E+02 0.0046 22.7 5.6 50 63-112 4-80 (97)
9 PHA02937 hypothetical protein; 25.0 4.5E+02 0.0098 24.7 8.1 41 309-349 210-250 (310)
10 PF05846 Chordopox_A15: Chordo 24.0 1.9E+02 0.0041 22.7 4.7 36 65-100 44-80 (90)
No 1
>KOG1299 consensus Vacuolar sorting protein VPS45/Stt10 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-80 Score=595.70 Aligned_cols=439 Identities=58% Similarity=0.918 Sum_probs=414.2
Q ss_pred CCHHHHHHHHHHHHhccC-CCcEEEEEcccchhhhhcccCchhHhhCCeEEEeeccccccccCcCCCCeEEEEecCCHHH
Q 042034 1 MVLVTAARDYINRMLQDI-SGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSEN 79 (449)
Q Consensus 1 m~l~~~~~~~l~~~L~~~-~~~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r~~~~~~~~iy~i~p~~~~ 79 (449)
|||+.+++.|+..++... +|-|||++|+.|.+++|.+++.|+++++.|++++.|++ +.|+.+.+.+||+|||||++|
T Consensus 1 Mnlv~~~k~yi~~m~~~~g~~mKvLLlD~eTt~ivS~~~tQSelLq~evyLferI~n--~~rE~~khLkcvvfiRPT~en 78 (549)
T KOG1299|consen 1 MNLVSSSKKYIEKMIQESGPGMKVLLLDKETTPIVSMCITQSELLQKEVYLFERIDN--KSRERIKHLKCVVFIRPTPEN 78 (549)
T ss_pred CchHHHHHHHHHHHHHhcCCCceEEEEcCCCceehhhhcchHHHhhhheehhhhhcc--hhhHHhhCceEEEEeccChHH
Confidence 999999999999999876 59999999999999999999999999999999999998 789999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEEeccCCChHHHHHHhcCCccccccceeEEecceEecCCCeeEecCCCCcccCCCCCCCcchH
Q 042034 80 IQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSL 159 (449)
Q Consensus 80 i~~i~~d~~~~~y~~~~i~f~~~~~~~~~~~L~~~~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~~~~~~~~~~~~~~ 159 (449)
++++++++++|+|..|||+|++.++...++.||+++..+.|+.|+|+++||++.++++|||+.|+.|... ..|+
T Consensus 79 iq~L~~ELrnPry~~Y~lyFsN~i~ks~le~LAesD~~E~V~eVqE~y~Df~~~n~~Lfsln~p~~~~~~--~~w~---- 152 (549)
T KOG1299|consen 79 IQLLIEELRNPRYGEYHLYFSNIISKSDLERLAESDEQEVVREVQEIYLDFFKVNPDLFSLNIPHIFESS--LNWD---- 152 (549)
T ss_pred HHHHHHHhcCCcceeEEEEEeccCCHHHHHHHHhcchHHHHHHHHHHHHhhhccCCceeecCCchhhccc--cccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999986543 4687
Q ss_pred HHHHHHHHHHHHHHHHHcCCCceEEeccCchHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeEEEecCCCCCcccccchh
Q 042034 160 QHFCDRVVDGIAAVFLALKRRPVIRYQRTSDIAKRIAQETTKLMYQQESGLFDFRRTEISPLLLILDRRDDPVTPLLNQW 239 (449)
Q Consensus 160 ~~~l~~ia~~L~sl~~~~g~~P~I~~~g~~~~a~~va~~l~~~l~~~~~~~~~~~~~~~~~~liIlDR~~DlvTPLl~~~ 239 (449)
...++++.+||.+++.+++..|.|||++++..|+++|+.+...|.+ +++.|+|+.+...++|+|+||..|++|||++||
T Consensus 153 ~~~l~R~~~GI~AllLsLK~~P~IRYq~~S~~~~~lAe~vs~~i~~-E~~lFdfr~~~~~p~LLiLDR~~DpvTPLL~qW 231 (549)
T KOG1299|consen 153 PGALTRSTQGIIALLLSLKKKPVIRYQTSSRACKRLAEEVSYRITK-ESTLFDFRRTDSPPLLLILDRRDDPVTPLLNQW 231 (549)
T ss_pred hhhhhHhHhhHHHHHHhccCCCeeEeecCCHHHHHHHHHHHHHHhh-hhhhcccccCCCCCeEEEEecCCCCCchhhhHH
Confidence 4678899999999999999999999999999999999999999954 888999987777899999999999999999999
Q ss_pred hhHHHHhhhcCccCCeEEEeccCCCCCCceEEecCCCCchHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccCCCCHHHH
Q 042034 240 TYQAMVHELIGIQDNKVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMVDEFQQVAKSNQSIQTIEDM 319 (449)
Q Consensus 240 TYe~Lidel~~I~~~~v~~~~~~~~~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~~~~~~~~~~~~~~~~s~~e~ 319 (449)
|||||+||++||++|+|++...++.+++.++++||+.+|+||+..++.||+++|..+++.++++|...+..++.+|+.||
T Consensus 232 TYQaMvHEl~gi~nnrvdls~~~~~~kd~~evvLS~~~D~Ff~~nmy~NfgEiG~~IK~lv~~fq~k~~~~~~iesi~Dm 311 (549)
T KOG1299|consen 232 TYQAMVHELLGIKNNRVDLSKVPSIPKDLEEVVLSSEQDPFFKNNMYANFGEIGSNIKQLVSEFQFKTKTNSNIESIADM 311 (549)
T ss_pred HHHHHHHHHhccccCEEeeccCCCCccccceeeeccccchHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhHHHH
Confidence 99999999999999999999888777777899999999999999999999999999999999999987777888999999
Q ss_pred HHHHHhchhhHHHhhhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcCCcchhHHHHHHHHhCCCCChhhHHHHHHHH
Q 042034 320 ARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSETEQELACNGGQGAAFEAVTNLLNNENVSDIDRLRLVMLY 399 (449)
Q Consensus 320 ~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~i~~li~~~~~~~~~~lRLl~L~ 399 (449)
+.|+...|++++....+++|+.+.+++++..+.+++.++.|+||+++++.+...+++.|.++|.++..+..+++||+|||
T Consensus 312 k~Fve~YPefkkmSG~VsKHv~lvgEls~lv~~~nL~evSEvEQ~l~c~~~~~~~~~~i~~LL~n~~vs~~d~lrLv~lY 391 (549)
T KOG1299|consen 312 KNFVEDYPEFKKMSGNVSKHVALVGELSKLVQRRNLLEVSEVEQNLACNGDHGADFNDIKKLLQNEKVSEIDRLRLVALY 391 (549)
T ss_pred HHHHHhcHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCcchhhHHHHHHHHcCCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999989999999999999
Q ss_pred HHHcCCCChhHHHHHHHHHHhhcCCCchHHHHHHHHhcCCCCCCCCCCCC
Q 042034 400 ALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLYGN 449 (449)
Q Consensus 400 ~l~~~g~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 449 (449)
+|.+...++.+..++-+.|.+.-+- .-.++..+++|||...|+.|+|+.
T Consensus 392 aLr~e~~~~~~~~~L~~~l~~~~~~-~~~~v~~ll~~~G~~~R~~dlf~~ 440 (549)
T KOG1299|consen 392 ALRYERHPPNELRQLPQILREQGPK-KPELVPFLLKYAGLHVRQGDLFGP 440 (549)
T ss_pred HHHhccCChHHHHHHHHHHHhcCCC-cchhHHHHHHhcCcccccccccCc
Confidence 9999999998889888877665443 778999999999999999999984
No 2
>PF00995 Sec1: Sec1 family; InterPro: IPR001619 Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis []. They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion []. ; GO: 0006904 vesicle docking involved in exocytosis, 0016192 vesicle-mediated transport; PDB: 3C98_A 3PUJ_B 1FVH_A 1FVF_A 1EPU_A 2XHE_A 1MQS_A 2PJX_A 3PUK_A 1Y9J_A.
Probab=100.00 E-value=6.1e-77 Score=631.43 Aligned_cols=412 Identities=31% Similarity=0.513 Sum_probs=341.0
Q ss_pred cEEEEEcccchhhhhcccCchhHhhCCeEEEeeccccccccCcCCCCeEEEEecCCHHHHHHHHHHhcCCCCceEEEEec
Q 042034 21 MKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFS 100 (449)
Q Consensus 21 ~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r~~~~~~~~iy~i~p~~~~i~~i~~d~~~~~y~~~~i~f~ 100 (449)
||+||+|+.+.++||+++++++|+++||++++.|++ .|+|.++.+|||||+|+.+++++|+++++++.|++|||+|+
T Consensus 1 wKvLi~D~~~~~ils~~~~~~~L~~~gV~~i~~l~~---~r~~~~~~~~iy~i~p~~~~i~~i~~~~~~~~~~~~~i~f~ 77 (564)
T PF00995_consen 1 WKVLILDKSTLKILSSLCSMSDLLEHGVTLIEKLEN---KREPMPSMDAIYFIRPTPENIKRIIKDLKNPPYRSYHIFFT 77 (564)
T ss_dssp -EEEEE-HHHHHHHHCCS-HHHHHTTTEEEEEETTS-----S-BTTSEEEEEE-S-HHHHHHHHHHCHSTSBSEEEEEES
T ss_pred CEEEEECcccHHHHHhhcCHHHHHHcCCceEeeccc---hhhcCCCcceEEEEcCcHHHHHHHHHHHHhcccccEEEEEe
Confidence 999999999999999999999999999999999997 99999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHhcCCccccccceeEEecceEecCCCeeEecCCCCcccCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCC
Q 042034 101 NMLKDTQIHILADSDEQEVVQQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAAVFLALKRR 180 (449)
Q Consensus 101 ~~~~~~~~~~L~~~~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~~~~~~~~~~~~~~~~~l~~ia~~L~sl~~~~g~~ 180 (449)
|+++..+++.|+++++.+.|.++.++++||+|+|+|+|||++|++|...+....+ .+.++++|++|+++|.++|.+
T Consensus 78 ~~~~~~~~~~l~~~~~~~~i~~i~e~~~~~~pld~d~fsl~~~~~~~~~~~~~~~----~~~l~~~a~~L~~l~~~~g~~ 153 (564)
T PF00995_consen 78 PRVSESLLEILAESGVLGRIKSIKEFNLDFIPLDSDLFSLEIPNSFSDLYSSDGD----ESSLQRIADSLLSLQLTLGEI 153 (564)
T ss_dssp S---HHHHHHHHHSCGGGGEEEEEETT--SEEECTTEEEES-TCHHHHHHSTTGH----HHHHHHHHHHHHHHHHHTT--
T ss_pred hhhhhHHHHhhhhcCccceecccccceeEEEEccchhhhhcccchHHHHhccccc----hhHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999988999999999999999999999986543221233 578999999999999999999
Q ss_pred ceEEeccCchHHHHHHHHHHHHHHhhh----ccCCCCC--CCCCCCeEEEecCCCCCcccccchhhhHHHHhhhcCccCC
Q 042034 181 PVIRYQRTSDIAKRIAQETTKLMYQQE----SGLFDFR--RTEISPLLLILDRRDDPVTPLLNQWTYQAMVHELIGIQDN 254 (449)
Q Consensus 181 P~I~~~g~~~~a~~va~~l~~~l~~~~----~~~~~~~--~~~~~~~liIlDR~~DlvTPLl~~~TYe~Lidel~~I~~~ 254 (449)
|.|||+|+ ..|++||+++.+++.+.. ....+++ +..++++|||+||++|++||||||||||||+||+|||++|
T Consensus 154 p~I~~~g~-~~a~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~iTPll~~~TYe~li~d~~~i~~~ 232 (564)
T PF00995_consen 154 PNIRYKGN-SNAKRVAELLQKKLQENEDNFSSSNPDFPPGSSFERPLLIILDRSVDLITPLLHQWTYEGLIDDLFGINNN 232 (564)
T ss_dssp -EEEE-TT-CHHHHHHHHHHHHHHHHHTTHCHCSTTTT-SCSCCSEEEEEEEGGG-SSTTTS---BHHHHHHHHSTEBTT
T ss_pred CeEEEeCc-hhHHHHHHHHHHHhhhccccccccccccCCccccCCceEEEecccccccchhhcCceeeeEHHhhhhhcCC
Confidence 99999996 379999999987775422 1111111 1234578999999999999999999999999999999999
Q ss_pred eEEEeccCCCCCCceEEecCCCCchHHHHhccCcHHHHHHHHHHHHHHHHHHH-HhccCCCCHHHHHHHHHhchhhHHHh
Q 042034 255 KVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMVDEFQQVA-KSNQSIQTIEDMARFVENYPEYKKMH 333 (449)
Q Consensus 255 ~v~~~~~~~~~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~~~~~~~~~-~~~~~~~s~~e~~~~v~~Lp~~~~~~ 333 (449)
.|+++.....+..++++.| +++|++|+++||+||++|++.|+++++++++++ ....+..++++|++||++||++++++
T Consensus 233 ~v~~~~~~~~~~~~~~~~L-~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~ 311 (564)
T PF00995_consen 233 KVEIPDEINSGENKKKVVL-NSNDPFFNEIRHLHFSEVGEKLNKKAKELKEEYEKSRSKSKSIQEMKEFVKKLPELQEQQ 311 (564)
T ss_dssp EEEEEECSSSSECEEEEE--STTCTCHHHHTTSBCHHHHHHHHHHHHHHHHHCH----STTTHHCHHHHHCCHHHHHHHH
T ss_pred EeccccCCCccccceeEec-CCCCHHHHHHHhhCHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHChHHHHHH
Confidence 9999886543333578999 459999999999999999999999999999775 34566789999999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcCCcchh-HHHHHHHHhCCCCChhhHHHHHHHHHHHcCCCChhHHH
Q 042034 334 GNVSKHVTLVTEMSKMVEERKLMLVSETEQELACNGGQGAA-FEAVTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLM 412 (449)
Q Consensus 334 ~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~-~~~i~~li~~~~~~~~~~lRLl~L~~l~~~g~~~~~~~ 412 (449)
+.++.|++||++|++.+++++|.+++++||++++|.+..+. .++|+++|.....+..++|||+|||+++. |+++++++
T Consensus 312 ~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~~i~~~i~~~~~~~~d~LRLl~L~sl~~-g~~~~~~~ 390 (564)
T PF00995_consen 312 KSLSLHTNIAEEILKIIKKRNLDELIELEQDIASGEDSDGELLQYIEELINSRKISIEDKLRLLCLYSLTN-GIKGKDYD 390 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHSCHTTSHB-SCHHHHHHSTTSTHHHHHHHHHHHHHHH--HTCBHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhCCccchhhHHHHHHHhhccCCCHHHHHHHHHHHHHHh-cCCcchHH
Confidence 99999999999999999999999999999999999887654 77899999544499999999999999998 99999999
Q ss_pred HHHHHHHhh-cCCCchHHHHHHHHhcCCCCC
Q 042034 413 QLFNKLASR-SAKYKPGLVQFLLKQAGVDKR 442 (449)
Q Consensus 413 ~l~~~l~~~-~~~~~~~~~~~l~~~~~~~~~ 442 (449)
.+++.+.+. ||.+++.++.+|.++|+...+
T Consensus 391 ~l~~~l~~~~~g~~~l~~l~~L~~~g~~~~~ 421 (564)
T PF00995_consen 391 QLKKLLLQAGYGIEALQLLNNLEKLGLLKSK 421 (564)
T ss_dssp HHHHHHHHTT--HCHHHHHHHGGGGTHHCBS
T ss_pred HHHHHhhhcCCChHHHHHHHHHHHhcchhhc
Confidence 999999999 999999999999999987644
No 3
>KOG1302 consensus Vacuolar sorting protein VPS33/slp1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-75 Score=582.26 Aligned_cols=424 Identities=22% Similarity=0.301 Sum_probs=381.3
Q ss_pred HHHHHHHHHHHHhccCCCcEEEEEcccchhhhhcccCchhHhhCCeEEEeecccccccc-CcCCCCeEEEEecCCHHHHH
Q 042034 3 LVTAARDYINRMLQDISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSK-ESMSHLKAVYFLRPSSENIQ 81 (449)
Q Consensus 3 l~~~~~~~l~~~L~~~~~~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r-~~~~~~~~iy~i~p~~~~i~ 81 (449)
+++++++.|.++|++.||.|.||+|+.++++|+++.+++.|++|||..+..++. ++ .+....+.|||+||+.++++
T Consensus 17 lq~~a~~eL~~lLds~pG~K~lvlD~dL~~pL~~ia~~s~Lk~hgV~~~~~l~~---~~~~~~~~~~~vy~~Rp~~~~~~ 93 (600)
T KOG1302|consen 17 LQEVARRELISLLDSLPGKKELVLDPDLMGPLGLIATASLLKEHGVRRLLHLDA---EKSPNSEVKQVVYFVRPRLENMQ 93 (600)
T ss_pred HHHHHHHHHHHHHhcCCCceeEEecccccchhhccccHHHHHHhCcHHhhccCc---ccCcccccCeEEEEEcCchHHHH
Confidence 678999999999999999999999999999999999999999999998888887 44 34556679999999999999
Q ss_pred HHHHHhcC----CCCceEEEEeccCCChHHHHHHhcCCccccccceeEEecceEecCCCeeEecCCCCcccCCCCCCCcc
Q 042034 82 HLRRQLAN----PRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPS 157 (449)
Q Consensus 82 ~i~~d~~~----~~y~~~~i~f~~~~~~~~~~~L~~~~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~~~~~~~~~~~~ 157 (449)
.|++++++ ...+.|||+|+|+++-.|...|+++|+++.+ .+.+++|+++|+|.|++|||+|++|. .++...+
T Consensus 94 ~ia~~v~~~~~d~~~r~~~vi~~P~~~~~c~~~Lee~gv~~~v-~~~e~~~~~lpld~DllSlEl~~~~~-d~~~~gd-- 169 (600)
T KOG1302|consen 94 LIAEHVENVQRDGFTRDYHVIFVPRRSSLCETLLEEEGVYGLV-LVEEQILDLLPLDGDLLSLELPNSFL-DLYLDGD-- 169 (600)
T ss_pred HHHHHHhhhhhchhcceeEEEEeccHHHHHHHHHHhccccccc-ccchhhhhhccccccchhccchHHHH-HHhhccc--
Confidence 99999987 2358999999999999999999999999888 89999999999999999999999865 4555555
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCceEEeccCchHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeEEEecCCCCCcccccc
Q 042034 158 SLQHFCDRVVDGIAAVFLALKRRPVIRYQRTSDIAKRIAQETTKLMYQQESGLFDFRRTEISPLLLILDRRDDPVTPLLN 237 (449)
Q Consensus 158 ~~~~~l~~ia~~L~sl~~~~g~~P~I~~~g~~~~a~~va~~l~~~l~~~~~~~~~~~~~~~~~~liIlDR~~DlvTPLl~ 237 (449)
++.+..+|+++.+++..+|.+|.|+..| ..|+++++++. ++.+.+.+. +.+..+.++++|++||++|++|||||
T Consensus 170 --~s~l~~va~~l~~LQ~~~G~ip~v~g~G--~~ak~~~~l~~-~l~~e~~t~-n~~~~~~~~~liLlDR~~D~vtpLlT 243 (600)
T KOG1302|consen 170 --QSSLYHVADALVSLQRLYGIIPKVYGKG--ECAKRVWELLK-KLEREEATE-NNGDRPEIDHLILLDRDVDPVTPLLT 243 (600)
T ss_pred --cchhHHHHHHHHHHHHhhCCCcceeecc--HHHHHHHHHHH-HHhhccccc-cCCCccccceEEEEeccCcccchhhh
Confidence 5778999999999999999999999988 67999999995 553333222 22223567899999999999999999
Q ss_pred hhhhHHHHhhhcCccCCeEEEeccCC----C-----CCCceEEecCCCCchHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Q 042034 238 QWTYQAMVHELIGIQDNKVDLRSIGD----F-----PKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMVDEFQQVAK 308 (449)
Q Consensus 238 ~~TYe~Lidel~~I~~~~v~~~~~~~----~-----~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~~~~~~~~~~ 308 (449)
|+||+||+||+|||++|.|++++..- + ++..++..+.++.|++|+++|++||+.|++.+++++++++.+++
T Consensus 244 QltYeGLLDEiy~I~~g~vk~p~~~~~~~q~g~~~~~~~~~~~~l~~~~deIy~eiR~k~f~~v~~~lsk~ak~l~~~~~ 323 (600)
T KOG1302|consen 244 QLTYEGLLDEIYGISSGNVKLPSENFKRNQAGDLGKGKTEKKIVLLYSSDEIYAEIRNKHFNAVGPLLSKKAKELQAQYE 323 (600)
T ss_pred HHHHHHHHHHHhhccCCeEecChHHccchhcCCCccCccccceeccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987520 0 11123444448899999999999999999999999999999999
Q ss_pred hccCCCCHHHHHHHHHhchhhHHHhhhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcCCcchhHHHHHHHHhCCCCC
Q 042034 309 SNQSIQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSETEQELACNGGQGAAFEAVTNLLNNENVS 388 (449)
Q Consensus 309 ~~~~~~s~~e~~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~i~~li~~~~~~ 388 (449)
.+++++|+.||++||++||++++.+++++.|+++|+.+++.+.+.+|.+.+++||+++.|.|.++..++|+|+|..+ .+
T Consensus 324 ~r~~~~sV~Eik~FV~~Lp~L~~~~~~l~~H~~lae~i~~~v~~~~f~~~l~lE~ell~~~d~~k~~~~IeElI~~~-~~ 402 (600)
T KOG1302|consen 324 TRRQAMSVAEIKDFVSKLPKLQQRKKSLERHTNLAEMIMQHVKNEDFRKLLKLEHELLEGNDSDKDFDYIEELIYQE-VP 402 (600)
T ss_pred hhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCcccchHHHHHHHhhc-cc
Confidence 88899999999999999999999999999999999999999999999999999999999999888899999999997 99
Q ss_pred hhhHHHHHHHHHHHcCCCChhHHHHHHHHHHhhcCCCchHHHHHHHHhcCCC
Q 042034 389 DIDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVD 440 (449)
Q Consensus 389 ~~~~lRLl~L~~l~~~g~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~ 440 (449)
...+|||+||.|++.+|+++|+|+.+++.+.|.||.+++.+++||++.|-..
T Consensus 403 ~~~vLRLicL~Slt~~Gl~~k~l~~~rr~~lqsYG~ehl~tl~nL~kaGLl~ 454 (600)
T KOG1302|consen 403 LNNVLRLICLLSLTCNGLKPKDLDHYRREYLQSYGYEHLLTLQNLEKAGLLR 454 (600)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999999999999999999664
No 4
>COG5158 SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]
Probab=100.00 E-value=6.6e-74 Score=581.21 Aligned_cols=427 Identities=32% Similarity=0.500 Sum_probs=375.7
Q ss_pred CCHHHHHHHHHHHHhccCC---CcEEEEEcccchhhhhcccCchhHhhCCeEEEeeccccccccCcCCCCeEEEEecCCH
Q 042034 1 MVLVTAARDYINRMLQDIS---GMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSS 77 (449)
Q Consensus 1 m~l~~~~~~~l~~~L~~~~---~~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r~~~~~~~~iy~i~p~~ 77 (449)
|+++++++.+|.+.+..+. .||||++|+.+..+||+++++++|++|||+.++.|++ +|+|..+.+|||||+||.
T Consensus 2 ~dl~e~q~~~i~~~i~~v~~~n~~KvLllD~~t~~ils~~~~~s~lle~~I~~~~~i~~---~R~~~~~~~aiy~v~pt~ 78 (582)
T COG5158 2 MDLLELQKNKILDEIFLVQPANIWKVLLLDKDTTSILSSLITTSELLEHGITLVDLIEN---KREPISDLPAIYFVRPTK 78 (582)
T ss_pred ccHHHHHHHHHHHHHHhcCCCcceEEEEEecchHHHHHhhcchHHHHhcCceEEEeecC---CCCCCCCCCEEEEEcCch
Confidence 8999999999999988775 3999999999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHhcC--CCCceEEEEeccCCChHHHHHHhcCCccccccceeEEecceEecCCCeeEecCCCCcccCCCCCCC
Q 042034 78 ENIQHLRRQLAN--PRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVD 155 (449)
Q Consensus 78 ~~i~~i~~d~~~--~~y~~~~i~f~~~~~~~~~~~L~~~~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~~~~~~~~~~ 155 (449)
+++++|++|++. |.|..||+.|+|.++..+++.+++.++...|..|.++++||+++|+|+||+++|..+... +..++
T Consensus 79 e~i~~i~~D~~~~~~~Y~~~~~~f~~~~~~~l~e~l~es~~~~~i~~V~e~~ldf~~le~dlfsl~~p~~~~~~-~~~~~ 157 (582)
T COG5158 79 ENIDLILEDLEQWDPFYLNYHISFLNTVTESLLELLAESGVFEKILSVYEIYLDFFVLESDLFSLNLPESFLES-SLPST 157 (582)
T ss_pred HHHHHHHHHHhccCccccceeEEecccchHHHHHHHhhcCchhheeeeeeeecceEEechHhHhhcCchhhhhh-cCCCc
Confidence 999999999999 899999999999999999999999999888999999999999999999999999876543 22333
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCceEEeccCchHHHHHHHHHHHHHHhhhccCCCCCC--CCCCCeEEEecCCCCCcc
Q 042034 156 PSSLQHFCDRVVDGIAAVFLALKRRPVIRYQRTSDIAKRIAQETTKLMYQQESGLFDFRR--TEISPLLLILDRRDDPVT 233 (449)
Q Consensus 156 ~~~~~~~l~~ia~~L~sl~~~~g~~P~I~~~g~~~~a~~va~~l~~~l~~~~~~~~~~~~--~~~~~~liIlDR~~DlvT 233 (449)
..++..+++||+++|.++|.+|.|||.++ ..|.++|+++...+++.....+++.. .+.++.|||+||+.|++|
T Consensus 158 ----~~~~~~~v~gl~S~~~slg~~P~Ir~~~~-~~a~~~ak~l~~~~~~~~~~~~~~~~~~~~~~~~LIIlDRs~D~iT 232 (582)
T COG5158 158 ----TEALIKIVNGLFSLCVSLGRIPIIRYSGG-KNAEHMAKKLSDEIRNELSINFDGVVSKNPLRPILIILDRSLDPIT 232 (582)
T ss_pred ----hHHHHHHHhhHHHHHhhcCCcceEEecCC-chHHHHHHHHHHHHHHHHHhhcccccccCCCCceEEEEecCCCccc
Confidence 23455899999999999999999999987 57999999998887544433333322 235899999999999999
Q ss_pred cccchhhhHHHHhhhcCccCCeEEEeccCCCCCCceEEecCCCCchHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccC-
Q 042034 234 PLLNQWTYQAMVHELIGIQDNKVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMVDEFQQVAKSNQS- 312 (449)
Q Consensus 234 PLl~~~TYe~Lidel~~I~~~~v~~~~~~~~~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~~~~~~~~~~~~~~- 312 (449)
||+||||||||+||+++|++|.|+++..+..+.+ |++.+++.+|++|.++||+||++|++.|++.+++++..+.....
T Consensus 233 PlLh~wTYqaml~Dl~~~~~~~v~~~~~~~~g~~-kk~~~~~~~D~~w~~~k~~~f~~v~e~l~~~~~~l~~~~~~~~~~ 311 (582)
T COG5158 233 PLLHQWTYQAMLHDLLGINNNIVTIPSSSVNGPE-KKFSLSDKDDPFWNDNKFLNFGEVGEKLKKLAKELKTKAQLRHKE 311 (582)
T ss_pred chHHHHHHHHHHHHHHHhhcCeEEeccccccccc-ceeccCCcccHhHHHhccCchhhHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999765443333 45556588999999999999999999999999999999866553
Q ss_pred -CCCHHHHHHHHHhchhhHHHhhhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcCCcchhHHHHHHHHhCCCCChhh
Q 042034 313 -IQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSETEQELACNGGQGAAFEAVTNLLNNENVSDID 391 (449)
Q Consensus 313 -~~s~~e~~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~i~~li~~~~~~~~~ 391 (449)
++|+.||++||.+||++++.++.+.+|+++|++|++.++.++|.++.++||++.++.+.+..+..+.+++..+ .+-.+
T Consensus 312 ~~~s~~dik~~v~~lpel~~~~~~l~~H~~l~~e~l~~~~~~~l~~f~eIEq~l~~~~~~~~~i~Dli~~l~~~-~~E~~ 390 (582)
T COG5158 312 NAKSVNDIKEFVDKLPELQKRSRSLNKHLTLASELLKVVEERYLDDFSEIEQNLSTGNDVKSDISDLIELLESG-VEEDD 390 (582)
T ss_pred hcccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhHHHHHHHHhcC-chHHH
Confidence 4799999999999999999999999999999999999999999999999999999887655666777766665 33336
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHhhcCCCchHHHHHHHHhcCC
Q 042034 392 RLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGV 439 (449)
Q Consensus 392 ~lRLl~L~~l~~~g~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~ 439 (449)
||||+|||+++.+|+ .++++.++....+.++.+++..++++..+|-.
T Consensus 391 klRllilysL~~~~~-~~~~~~~~~l~~~~~~~e~~~~~~~l~~~~~~ 437 (582)
T COG5158 391 KLRLLILYSLTKDGL-IKDIDELRLLRIQGYGIEALNFFQRLKELGFL 437 (582)
T ss_pred HHHHHHHHHHhcCcc-hhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 999999999999997 67778888877777999999999999877743
No 5
>KOG1300 consensus Vesicle trafficking protein Sec1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-71 Score=553.59 Aligned_cols=429 Identities=24% Similarity=0.389 Sum_probs=367.5
Q ss_pred CCHHHHHHHHH-HHHhccC--CCcEEEEEcccchhhhhcccCchhHhhCCeEEEeeccccccccCcCCCCeEEEEecCCH
Q 042034 1 MVLVTAARDYI-NRMLQDI--SGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAVYFLRPSS 77 (449)
Q Consensus 1 m~l~~~~~~~l-~~~L~~~--~~~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r~~~~~~~~iy~i~p~~ 77 (449)
|+++++.++.+ ..+++.. ..|||||+|+.+++++|++|++++++++||+.++.|+. .|+|.+.+.||||++|+.
T Consensus 1 m~l~~l~~~kil~~v~~~~k~g~wkVLi~Dk~~~~ilss~~km~~i~~egIt~ve~i~~---~ReP~~SmeaIY~i~pt~ 77 (593)
T KOG1300|consen 1 MGLKELVKKKILEDVLRVEKKGEWKVLVVDKLTMRILSSCCKMSEILEEGITIVEDINK---RREPLPSMEAIYFITPTE 77 (593)
T ss_pred CchHHHHHHHHHHHhcccCCCCeeEEEEecchHHHHHHHHHHHHHHHHcCceeeeeccc---cCCCCCcceeEEEecCch
Confidence 78899998765 5556533 25999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHHHHHHhcC--CCCceEEEEeccCCChHHHHHHhcCCccccccceeEEecceEecCCCeeEecCCCCcccCCCCCCC
Q 042034 78 ENIQHLRRQLAN--PRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVD 155 (449)
Q Consensus 78 ~~i~~i~~d~~~--~~y~~~~i~f~~~~~~~~~~~L~~~~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~~~~~~~~~~ 155 (449)
++++++++||.. |.|+.+||||++.+++.++..|..+..+..|.++++++++|+|+|+++|+++.|+++...+... +
T Consensus 78 ~~V~~~i~Df~~~~~~Y~~ahifF~~~c~~~lf~~l~ks~~a~~i~tlkeinl~F~p~ESqvF~~~~~~~~~~~y~~~-~ 156 (593)
T KOG1300|consen 78 ESVDCLIKDFEGRSPLYKAAHIFFLDPCPDPLFNKLSKSRAAKKIKTLKEINLAFIPYESQVFTLDSPDAFLQLYSPD-N 156 (593)
T ss_pred hhHHHHHHhhcccCcccceEEEEEcCCCCHHHHHHHHhhhHhhhhhhheecccccceecceeeeecChhhHHHhcCch-h
Confidence 999999999954 6899999999999999999999977788899999999999999999999999999876543332 3
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCceEEeccCc-----hHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeEEEecCCCC
Q 042034 156 PSSLQHFCDRVVDGIAAVFLALKRRPVIRYQRTS-----DIAKRIAQETTKLMYQQESGLFDFRRTEISPLLLILDRRDD 230 (449)
Q Consensus 156 ~~~~~~~l~~ia~~L~sl~~~~g~~P~I~~~g~~-----~~a~~va~~l~~~l~~~~~~~~~~~~~~~~~~liIlDR~~D 230 (449)
.......++.+|++|+++|.++|++|+|||.+.. ..|.+||..+..-+.... ..+...+...++.|||+||++|
T Consensus 157 a~~~~~~l~~~a~~I~tvCatL~e~P~vRy~~~~~~~as~l~~~va~~l~~~~~~~~-~~~~~~p~~~~seLlIlDRs~D 235 (593)
T KOG1300|consen 157 AAIIDANLEKIADQIATVCATLGEYPNVRYRGDFARNASELAQKVAAKLWDAYKAYK-PSIGNGPQKTRSELLILDRSFD 235 (593)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhCcCcceeeccccccCHHHHHHHHHHHHHHHHHhcc-cccCCCCCcccceEEEEecccc
Confidence 3344578999999999999999999999999852 345555555543332233 2333344466889999999999
Q ss_pred CcccccchhhhHHHHhhhcCccCCeEEEeccCCCCCCceEEecCCCCchHHHHhccCcHHHHHHHHHHHHHHHHHHHH--
Q 042034 231 PVTPLLNQWTYQAMVHELIGIQDNKVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMVDEFQQVAK-- 308 (449)
Q Consensus 231 lvTPLl~~~TYe~Lidel~~I~~~~v~~~~~~~~~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~~~~~~~~~~-- 308 (449)
++||++|+||||||+||+++|++|.|.++..+.++.+++++.| +++|++|.++||+|+++|.+.|.+.++++....+
T Consensus 236 ~iaPlLHE~TyqAM~~DLl~iend~Y~ye~~g~~g~~kk~vll-de~D~~WveLRH~HIadvse~l~~~~k~f~~~nk~~ 314 (593)
T KOG1300|consen 236 PVAPLLHEFTYQAMAYDLLPIENDVYRYETPGKSGEKKKEVLL-DEDDDLWVELRHKHIADVSERLTKKMKNFSSKNKRL 314 (593)
T ss_pred ccchHHHHHHHHHHHHHHHhhcCCEEEEecCCCCCCccceeec-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999776544444677888 7899999999999999999999999999988752
Q ss_pred -hccCCCCHHHHHHHHHhchhhHHHhhhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHHhhcCCcch-----hHHHHHHHH
Q 042034 309 -SNQSIQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSETEQELACNGGQGA-----AFEAVTNLL 382 (449)
Q Consensus 309 -~~~~~~s~~e~~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~-----~~~~i~~li 382 (449)
.+.+..|++|+..+|++||+++++..+++.|+.+|++|++.++. .+++++.+||+++.|.|..+ .+..+.+++
T Consensus 315 ~~~~k~~S~kDL~~mv~~lpqy~k~~~Kls~Hl~LA~eC~~~~~~-~L~~l~~iEQDLa~G~Daeg~kik~~~~~~~p~l 393 (593)
T KOG1300|consen 315 QTKSKETSTKDLSKMVKKLPQYQKELDKLSLHLELAEECMKKFQE-GLEKLGAIEQDLATGTDAEGEKIKDSLRDLLPIL 393 (593)
T ss_pred hccccccchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCcccccHHHHHHhhhhhh
Confidence 22334789999999999999999999999999999999999997 99999999999999977542 456677877
Q ss_pred hCCCCChhhHHHHHHHHHHHcCCCChhHHHHHHHHHHhh-cCCCchHHHHHHHHhcCC
Q 042034 383 NNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASR-SAKYKPGLVQFLLKQAGV 439 (449)
Q Consensus 383 ~~~~~~~~~~lRLl~L~~l~~~g~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~~~~~ 439 (449)
..+..+..+++|++++|.+..+|+.. +.+.+++.+. ++.++.+++.|+..+|..
T Consensus 394 ~~~~~~~~dklR~Illy~~~~~Gi~e---e~l~kL~~~~~i~~~~~~ii~~~~~~~~~ 448 (593)
T KOG1300|consen 394 LESNVRLLDKLRLILLYIFERKGIIE---ENLAKLLQHAGISVEEMQIIQNLHILGVP 448 (593)
T ss_pred cccCchHHHHHHHHHHHHHhcCCccH---HHHHHHhcccCCCchHHHHHhhHHHhCCc
Confidence 77779999999999999999889875 5666766566 999999999999999965
No 6
>KOG1301 consensus Vesicle trafficking protein Sly1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9e-69 Score=521.79 Aligned_cols=426 Identities=24% Similarity=0.370 Sum_probs=364.0
Q ss_pred CHHHHHHHHHHHHhc-----------cCCCcEEEEEcccchhhhhcccCchhHhhCCeEEEeeccccccccCcCCCCeEE
Q 042034 2 VLVTAARDYINRMLQ-----------DISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKSKESMSHLKAV 70 (449)
Q Consensus 2 ~l~~~~~~~l~~~L~-----------~~~~~kvLv~D~~~~~~ls~~~~~~~L~~~gV~~i~~l~~~~~~r~~~~~~~~i 70 (449)
+|.+.+-..+..+|. ..|-|||||+|..++.+||+++++++|++||||++..|.+ .|+|+++++||
T Consensus 11 slRe~Qi~al~~mlnLN~~~~~~~~~~epvWKVLI~Dr~gq~iISpll~VkeLRe~GvTlH~li~~---dR~Pi~DVPAV 87 (621)
T KOG1301|consen 11 SLRERQIVALKKMLNLNKPVNKNGTAAEPVWKVLILDRFGQDIISPLLRVKELREHGITLHLLITS---DRDPIPDVPAV 87 (621)
T ss_pred hHHHHHHHHHHHHHHhcCCccccccccCCceEEEEEecccchhhcccccHHHHHhcCcEEEEeecc---ccCCCCCCCeE
Confidence 566777777777763 1356999999999999999999999999999999999997 99999999999
Q ss_pred EEecCCHHHHHHHHHHhcCCCCceEEEEeccCCChHHHHHHhcC----CccccccceeEEecceEecCCCeeEecCCCCc
Q 042034 71 YFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADS----DEQEVVQQVQEFYADFVAVEPYHFTLNIPSNH 146 (449)
Q Consensus 71 y~i~p~~~~i~~i~~d~~~~~y~~~~i~f~~~~~~~~~~~L~~~----~~~~~i~~i~e~~ldfipld~dlfsl~~~~~~ 146 (449)
|||.||.||+++|++|+++..|.+||++|+..++...+|.||+. |....|.+|.+-+++|+.+|+|+|+|+++++|
T Consensus 88 YFV~Pt~eNid~i~~Dl~~~lY~~~ylNF~Ssi~R~~LE~lA~~a~~~g~v~~I~kVyDQYlnFI~LEddlFsL~~~~~~ 167 (621)
T KOG1301|consen 88 YFVSPTEENIDRIIQDLSKGLYDSYYLNFISSISRSLLEDLASAASETGAVLQIHKVYDQYLNFIVLEDDLFSLGMQNSF 167 (621)
T ss_pred EEeCCchHhHHHHHHHHHHhhhhhheeeccccccHHHHHHHHHHHhhcchHHHHHHHHHhHhhheeecchhhhhcccccc
Confidence 99999999999999999999999999999999999999999964 55667888999999999999999999999997
Q ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCCceEEeccCchHHHHHHHHHHHHHHhhh----ccCCCC---CCCCCC
Q 042034 147 LYMLPAVVDPSSLQHFCDRVVDGIAAVFLALKRRPVIRYQRTSDIAKRIAQETTKLMYQQE----SGLFDF---RRTEIS 219 (449)
Q Consensus 147 ~~~~~~~~~~~~~~~~l~~ia~~L~sl~~~~g~~P~I~~~g~~~~a~~va~~l~~~l~~~~----~~~~~~---~~~~~~ 219 (449)
..+.........+...++++|++|+++|.++|.+|.|||..++ .|+.||++|.+++++.- ++.+.- ...-++
T Consensus 168 ~~~n~p~t~e~ei~~~~~~IvdgLF~v~vTlG~VPiIRcp~g~-aAEmvA~kL~qKLRd~l~d~k~~lft~~~~~~~~~R 246 (621)
T KOG1301|consen 168 HAINRPSTTEEEINALMDRIVDGLFSVFVTLGEVPIIRCPKGG-AAEMVARKLDQKLRDNLRDTKNNLFTMDGGGAGFQR 246 (621)
T ss_pred hhccCCCchHHHHHHHHHHHHHHHHHHheecccceeEECCCCC-HHHHHHHHHHHHHHHHhHhhcccceeccCcccCCCC
Confidence 5543333333456688999999999999999999999999875 69999999999986431 222111 012368
Q ss_pred CeEEEecCCCCCcccccchhhhHHHHhhhcCccCCeEEEeccCCCCCCceEEecCCCCchHHHHhccCcHHHHHHHHHHH
Q 042034 220 PLLLILDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRM 299 (449)
Q Consensus 220 ~~liIlDR~~DlvTPLl~~~TYe~Lidel~~I~~~~v~~~~~~~~~~~~~~~~L~~~~D~i~~~~R~~~f~~v~~~l~~~ 299 (449)
|.|+|+||++|++||+-|.||||||+||+|+.+.|.|+++.+. .++.+|.+.| +.+|++|+.+.+..|++|++.+.+.
T Consensus 247 PvLvl~DRn~Dlat~l~HtWtYqaLvhDvl~l~lN~vtv~~~~-~~~~~k~yDl-d~~D~fW~~n~~~pFP~VAE~Ve~e 324 (621)
T KOG1301|consen 247 PVLVLLDRNIDLATPLHHTWTYQALVHDVLDLELNRVTLESES-KRKKKKSYDL-DPNDKFWRRNKGSPFPEVAENVEEE 324 (621)
T ss_pred ceEEEEecccccccccccceehHHHHHHHHhcccceEEeeccc-cCCCCccccC-CCccHHHHhcCCCCCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 3445678999 6799999999999999999999999
Q ss_pred HHHHHHHHHhcc---C-----------CCCHHHHHHHHHhchhhHHHhhhHHhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 042034 300 VDEFQQVAKSNQ---S-----------IQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSETEQEL 365 (449)
Q Consensus 300 ~~~~~~~~~~~~---~-----------~~s~~e~~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i 365 (449)
+.+|+.+..+.. + .++...+++.|+.||++.++++.+.+|++||+++.+.++.++++.++++|+++
T Consensus 325 L~~Yk~~~~ei~r~~G~sg~~e~~~~~~~Dtt~l~~aV~sLPEL~ekK~~ID~HtnIatalL~~IkeR~lD~ff~~E~~~ 404 (621)
T KOG1301|consen 325 LESYKNEEAEIKRKMGLSGEDEGAIDELNDTTKLQSAVSSLPELTEKKRLIDLHTNIATALLEQIKERKLDDFFEVEKKI 404 (621)
T ss_pred HHHHHhhHHHHHhhcCCCcccccccccccchHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhHHHHHhccc
Confidence 999998864322 1 12344799999999999999999999999999999999999999999999999
Q ss_pred hhcCCcchhHHHHHHHHhCCCCChhhHHHHHHHHHHHcCCCChhHHHHHHHHHHhh-cCCCchHHHHHHHHh
Q 042034 366 ACNGGQGAAFEAVTNLLNNENVSDIDRLRLVMLYALRYEKDSPVQLMQLFNKLASR-SAKYKPGLVQFLLKQ 436 (449)
Q Consensus 366 ~~~~~~~~~~~~i~~li~~~~~~~~~~lRLl~L~~l~~~g~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~~ 436 (449)
.++.-.. ..++-+...+....+||||++++|.++.+.++..++++++..+..+ |..+++++++++...
T Consensus 405 ~~~~l~~---~~l~~~~~~~~gt~EDkLR~~Ii~~ls~et~~~s~le~~e~al~e~~~d~~Al~yvkr~k~~ 473 (621)
T KOG1301|consen 405 MSTTLDR---SLLDILEDGEAGTPEDKLRLFIIYYLSTETVPQSDLEAVENALTEAGCDLNALKYVKRLKEI 473 (621)
T ss_pred ccccccH---HHHHHHhcccCCChHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 9732211 2333333334468999999999999999988899999999999888 999999999997544
No 7
>PF14071 YlbD_coat: Putative coat protein
Probab=45.77 E-value=16 Score=30.46 Aligned_cols=14 Identities=21% Similarity=0.406 Sum_probs=11.9
Q ss_pred EecCCCCchHHHHhc
Q 042034 271 VVLSSEQDTFFKANM 285 (449)
Q Consensus 271 ~~L~~~~D~i~~~~R 285 (449)
+.| -+.|++|..+|
T Consensus 32 ~Ll-GEdD~~W~~Yk 45 (124)
T PF14071_consen 32 YLL-GEDDPIWDPYK 45 (124)
T ss_pred HHh-CCCcchHHHhh
Confidence 455 78999999999
No 8
>CHL00123 rps6 ribosomal protein S6; Validated
Probab=25.83 E-value=2.1e+02 Score=22.65 Aligned_cols=50 Identities=10% Similarity=0.222 Sum_probs=31.7
Q ss_pred cCCCCeEEEEecCC--HHHHHHHHHHhcC------------------------CC-CceEEEEeccCCChHHHHHHh
Q 042034 63 SMSHLKAVYFLRPS--SENIQHLRRQLAN------------------------PR-FGEYHLFFSNMLKDTQIHILA 112 (449)
Q Consensus 63 ~~~~~~~iy~i~p~--~~~i~~i~~d~~~------------------------~~-y~~~~i~f~~~~~~~~~~~L~ 112 (449)
++....++|+++|+ .+.++.+++.++. .+ .+.+|++|.=.++...+..|+
T Consensus 4 ~mr~YE~~~Il~p~l~e~~~~~~~~~~~~~i~~~gg~i~~~~~wG~r~LAY~I~k~~~G~Yv~~~f~~~~~~i~ele 80 (97)
T CHL00123 4 KLNKYETMYLLKPDLNEEELLKWIENYKKLLRKRGAKNISVQNRGKRKLSYKINKYEDGIYIQMNYSGNGKLVNSLE 80 (97)
T ss_pred cccceeEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCeeeeEEcCCCCEEEEEEEEEEECHHHHHHHH
Confidence 34567899999997 5556666555431 02 245677766666666666655
No 9
>PHA02937 hypothetical protein; Provisional
Probab=25.00 E-value=4.5e+02 Score=24.69 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=30.4
Q ss_pred hccCCCCHHHHHHHHHhchhhHHHhhhHHhHHHHHHHHHHH
Q 042034 309 SNQSIQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKM 349 (449)
Q Consensus 309 ~~~~~~s~~e~~~~v~~Lp~~~~~~~~l~~H~~i~~~i~~~ 349 (449)
++-..+|++|+.-|+++..++.++...+..-.++..++-+.
T Consensus 210 ekIeITs~nDii~flKkis~LLe~sal~~~l~~li~~~ded 250 (310)
T PHA02937 210 EKIEITSANDIILFLKKISQLLEDSALFTHLANLIDEIDED 250 (310)
T ss_pred cceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456899999999999999998877776666666555543
No 10
>PF05846 Chordopox_A15: Chordopoxvirus A15 protein; InterPro: IPR008445 This family consists of several Chordopoxvirus A15 like sequences.
Probab=24.04 E-value=1.9e+02 Score=22.70 Aligned_cols=36 Identities=14% Similarity=0.402 Sum_probs=29.6
Q ss_pred CCCeEEEEecCCHHHHHHHHHHhcCCCC-ceEEEEec
Q 042034 65 SHLKAVYFLRPSSENIQHLRRQLANPRF-GEYHLFFS 100 (449)
Q Consensus 65 ~~~~~iy~i~p~~~~i~~i~~d~~~~~y-~~~~i~f~ 100 (449)
.+.++||+|.|+...+-+|+-.++..+. ..++|.|-
T Consensus 44 ~~~ksilLVNPs~~~Llkicv~ikr~kW~G~i~iLFe 80 (90)
T PF05846_consen 44 KDFKSILLVNPSYIQLLKICVYIKRNKWGGNIYILFE 80 (90)
T ss_pred cccceEEEECCCHHHHHHHHHHHhcCCcCCeEEEEEe
Confidence 3778999999999999999988887554 56888875
Done!